BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3587
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36916|GNL1_MOUSE Guanine nucleotide-binding protein-like 1 OS=Mus musculus GN=Gnl1
PE=1 SV=4
Length = 607
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 111/146 (76%), Gaps = 5/146 (3%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+VVSVSRTPGHT++FQT FLT +++LCDCPGL+FPS +P+ LQVL G +PIAQ++EPY++
Sbjct: 384 KVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTS 443
Query: 102 VQYLAERMDLIKLLHIKHPDDDE-----YWCAMDICDGWAQKRSYMTAKTGRYDSYRAAN 156
V YLA R+ + LLH++HP+ ++ WCA DIC+ WA+KR Y TAK R D YRAAN
Sbjct: 444 VGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAAN 503
Query: 157 ELLRMATEGRICLCLMPPQYLSKQGV 182
LLR+A +GR+ LC PP Y ++G
Sbjct: 504 SLLRLAVDGRLSLCFYPPGYSEQRGT 529
>sp|Q5RA07|GNL1_PONAB Guanine nucleotide-binding protein-like 1 OS=Pongo abelii GN=GNL1
PE=2 SV=1
Length = 607
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 110/146 (75%), Gaps = 5/146 (3%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+VVSVSRTPGHT++FQT FLT +++LCDCPGL+FPS +P+ LQVL G +PIAQ++EPY+
Sbjct: 384 KVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTA 443
Query: 102 VQYLAERMDLIKLLHIKHPDDDE-----YWCAMDICDGWAQKRSYMTAKTGRYDSYRAAN 156
V YLA R+ + LLH++HP+ ++ WCA DIC+ WA+KR Y TAK R D YRAAN
Sbjct: 444 VGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAAN 503
Query: 157 ELLRMATEGRICLCLMPPQYLSKQGV 182
LLR+A +GR+ LC PP Y ++G
Sbjct: 504 SLLRLAVDGRLSLCFHPPGYSEQKGT 529
>sp|Q7YR35|GNL1_PANTR Guanine nucleotide-binding protein-like 1 OS=Pan troglodytes
GN=GNL1 PE=3 SV=3
Length = 607
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 110/146 (75%), Gaps = 5/146 (3%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+VVSVSRTPGHT++FQT FLT +++LCDCPGL+FPS +P+ LQVL G +PIAQ++EPY+
Sbjct: 384 KVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTA 443
Query: 102 VQYLAERMDLIKLLHIKHPDDDE-----YWCAMDICDGWAQKRSYMTAKTGRYDSYRAAN 156
V YLA R+ + LLH++HP+ ++ WCA DIC+ WA+KR Y TAK R D YRAAN
Sbjct: 444 VGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAAN 503
Query: 157 ELLRMATEGRICLCLMPPQYLSKQGV 182
LLR+A +GR+ LC PP Y ++G
Sbjct: 504 SLLRLAVDGRLSLCFHPPGYSEQKGT 529
>sp|P36915|GNL1_HUMAN Guanine nucleotide-binding protein-like 1 OS=Homo sapiens GN=GNL1
PE=1 SV=2
Length = 607
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 110/146 (75%), Gaps = 5/146 (3%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+VVSVSRTPGHT++FQT FLT +++LCDCPGL+FPS +P+ LQVL G +PIAQ++EPY+
Sbjct: 384 KVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTA 443
Query: 102 VQYLAERMDLIKLLHIKHPDDDE-----YWCAMDICDGWAQKRSYMTAKTGRYDSYRAAN 156
V YLA R+ + LLH++HP+ ++ WCA DIC+ WA+KR Y TAK R D YRAAN
Sbjct: 444 VGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAAN 503
Query: 157 ELLRMATEGRICLCLMPPQYLSKQGV 182
LLR+A +GR+ LC PP Y ++G
Sbjct: 504 SLLRLAVDGRLSLCFHPPGYSEQKGT 529
>sp|Q5TM59|GNL1_MACMU Guanine nucleotide-binding protein-like 1 OS=Macaca mulatta GN=GNL1
PE=3 SV=1
Length = 607
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 110/146 (75%), Gaps = 5/146 (3%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+VVSVSRTPGHT++FQT FLT +++LCDCPGL+FPS +P+ LQVL G +PIAQ++EPY+
Sbjct: 384 KVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTA 443
Query: 102 VQYLAERMDLIKLLHIKHPDDDE-----YWCAMDICDGWAQKRSYMTAKTGRYDSYRAAN 156
V YLA R+ + LLH++HP+ ++ WCA DIC+ WA+KR Y TAK R D YRAAN
Sbjct: 444 VGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAAN 503
Query: 157 ELLRMATEGRICLCLMPPQYLSKQGV 182
LLR+A +GR+ LC PP Y ++G
Sbjct: 504 SLLRLAVDGRLSLCFHPPGYSEQKGT 529
>sp|Q4R8D2|GNL1_MACFA Guanine nucleotide-binding protein-like 1 OS=Macaca fascicularis
GN=GNL1 PE=2 SV=1
Length = 607
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 110/146 (75%), Gaps = 5/146 (3%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+VVSVSRTPGHT++FQT FLT +++LCDCPGL+FPS +P+ LQVL G +PIAQ++EPY+
Sbjct: 384 KVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTA 443
Query: 102 VQYLAERMDLIKLLHIKHPDDDE-----YWCAMDICDGWAQKRSYMTAKTGRYDSYRAAN 156
V YLA R+ + LLH++HP+ ++ WCA DIC+ WA+KR Y TAK R D YRAAN
Sbjct: 444 VGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICEAWAEKRGYKTAKAARNDVYRAAN 503
Query: 157 ELLRMATEGRICLCLMPPQYLSKQGV 182
LLR+A +GR+ LC PP Y ++G
Sbjct: 504 SLLRLAVDGRLSLCFHPPGYSEQKGT 529
>sp|Q6MG06|GNL1_RAT Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus
GN=Gnl1 PE=2 SV=1
Length = 607
Score = 182 bits (463), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 111/146 (76%), Gaps = 5/146 (3%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+VVSVSRTPGHT++FQT FLT +++LCDCPGL+FPS +P+ LQVL G +PIAQ++EPY++
Sbjct: 384 KVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSLLPRQLQVLAGIYPIAQIQEPYTS 443
Query: 102 VQYLAERMDLIKLLHIKHPDDDE-----YWCAMDICDGWAQKRSYMTAKTGRYDSYRAAN 156
V YLA R+ + LLH++HP+ ++ WCA D+C+ WA+KR Y TAK R D YRAAN
Sbjct: 444 VGYLACRIPVQALLHLRHPEAEDPSAEHPWCAWDVCEAWAEKRGYKTAKAARNDVYRAAN 503
Query: 157 ELLRMATEGRICLCLMPPQYLSKQGV 182
LLR+A +GR+ LC PP Y ++G
Sbjct: 504 SLLRLAVDGRLSLCFHPPGYSEQRGT 529
>sp|P53145|LSG1_YEAST Large subunit GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=LSG1 PE=1 SV=1
Length = 640
Score = 89.7 bits (221), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPS-KVPKPLQVLMGSFPIAQLREPYSTV 102
VSVS TPG TKHFQTI L+D++ LCDCPGLVFP+ K V G PI QLR+
Sbjct: 362 VSVSSTPGKTKHFQTIKLSDSVMLCDCPGLVFPNFAYNKGELVCNGVLPIDQLRDYIGPA 421
Query: 103 QYLAER-----MDLIKLLHIKHPDDDE-----YWCAMDICDGWAQKRSYMTAKTGRYDSY 152
+AER ++ I +HI+ DE A ++ +A+ R YMT G D
Sbjct: 422 GLVAERIPKYYIEAIYGIHIQTKSRDEGGNGDIPTAQELLVAYARARGYMTQGYGSADEP 481
Query: 153 RAANELLRMATEGRICLCLMPPQYL 177
RA+ +L+ G++ L + PP +L
Sbjct: 482 RASRYILKDYVNGKL-LYVNPPPHL 505
>sp|Q10190|LSG1_SCHPO Large subunit GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lsg1 PE=3 SV=1
Length = 616
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPS-KVPKPLQVLMGSFPIAQLREPYSTV 102
VSVS TPG TKHFQTI L++ + L DCPGLVFPS + VL G PI QLRE
Sbjct: 327 VSVSSTPGKTKHFQTINLSEKVSLLDCPGLVFPSFATTQADLVLDGVLPIDQLREYTGPS 386
Query: 103 QYLAER-----MDLIKLLHIKHPDDDE----YWCAMDICDGWAQKRSYMTAKTGRYDSYR 153
+AER ++ + + I+ +E A ++ +A+ R +M A G D R
Sbjct: 387 ALMAERIPKEVLETLYTIRIRIKPIEEGGTGVPSAQEVLFPFARSRGFMRAHHGTPDDSR 446
Query: 154 AANELLRMATEGRICLCLMPPQY 176
AA LL+ G++ PP Y
Sbjct: 447 AARILLKDYVNGKLLYVHPPPNY 469
>sp|Q9W590|LSG1_DROME Large subunit GTPase 1 homolog OS=Drosophila melanogaster GN=ns3
PE=1 SV=1
Length = 606
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 73/148 (49%), Gaps = 25/148 (16%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKV-PKPLQVLMGSFPIAQLREPYSTV 102
VSVS TPG TK FQT+FL +I LCDCPGLV PS V K +L G PI Q+R+ V
Sbjct: 363 VSVSATPGKTKRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHVPAV 422
Query: 103 QYLAERMDLIKLLHIKHPDDDEYWCAM----------------DICDGWAQKRSYMTAKT 146
L ER+ +H +D+Y + ++ + R +MT+
Sbjct: 423 NLLCERIP-------RHVLEDKYGIVIAKPLEGEDMERPPHSEELLLAYGYNRGFMTS-N 474
Query: 147 GRYDSYRAANELLRMATEGRICLCLMPP 174
G+ D R+A +L+ GR+ + PP
Sbjct: 475 GQPDQARSARYVLKDYVNGRLLYAMSPP 502
>sp|Q6NY89|LSG1_DANRE Large subunit GTPase 1 homolog OS=Danio rerio GN=lsg1 PE=2 SV=1
Length = 640
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVL-MGSFPIAQLREPYSTV 102
VSVS TPGHTKHFQT+F+ + LCDCPGLV PS V +++ G PI Q+R+ +
Sbjct: 394 VSVSATPGHTKHFQTLFVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPAI 453
Query: 103 QYLAER-----------MDLIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTAKTGRYDS 151
+ + +++I+ + PD + + + G+ R +MTA G+ D
Sbjct: 454 SLVCQNIPRNVLEGTYGINIIRPREDEDPDRPPTYEELLMAYGYM--RGFMTAH-GQPDQ 510
Query: 152 YRAANELLRMATEGRICLCLMPPQYLSKQGVSKHSRPAVR 191
R+A +L+ G++ C PP + +H++ A+R
Sbjct: 511 SRSARYVLKDYVSGKLLYCHPPPHINPEDFQPQHAKFAMR 550
>sp|Q5BJT6|LSG1_RAT Large subunit GTPase 1 homolog OS=Rattus norvegicus GN=Lsg1 PE=2
SV=1
Length = 655
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 11/141 (7%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVL-MGSFPIAQLRE---PY 99
VSVS TPGHTKHFQT+++ + LCDCPGLV PS V +++ G PI Q+R+ P
Sbjct: 409 VSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPV 468
Query: 100 STV-QYLAER-MDLIKLLHIKHPDDDE--YW--CAMDICDGWAQKRSYMTAKTGRYDSYR 153
S V Q + R ++ ++I P +DE Y + ++ + R +MTA G+ D R
Sbjct: 469 SLVCQNIPRRVLEATYGINIIKPGEDEDPYRPPTSEELLTAYGCMRGFMTAH-GQPDQPR 527
Query: 154 AANELLRMATEGRICLCLMPP 174
+A +L+ G++ C PP
Sbjct: 528 SARYILKDYVRGKLLYCHPPP 548
>sp|Q3UM18|LSG1_MOUSE Large subunit GTPase 1 homolog OS=Mus musculus GN=Lsg1 PE=2 SV=2
Length = 644
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVL-MGSFPIAQLRE---PY 99
VSVS TPGHTKHFQT+++ + LCDCPGLV PS V +++ G PI Q+R+ P
Sbjct: 398 VSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICNGILPIDQMRDHVPPV 457
Query: 100 STV-QYLAER-MDLIKLLHIKHP--DDDEYW--CAMDICDGWAQKRSYMTAKTGRYDSYR 153
S V Q + R +++ ++I P D+D Y + ++ + R +MTA G+ D R
Sbjct: 458 SLVCQNIPRRVLEVTYGINIIKPREDEDPYRPPTSEELLTAYGCMRGFMTAH-GQPDQPR 516
Query: 154 AANELLRMATEGRICLCLMPP 174
+A +L+ G++ C PP
Sbjct: 517 SARYILKDYVGGKLLYCHPPP 537
>sp|Q5ZJD3|LSG1_CHICK Large subunit GTPase 1 homolog OS=Gallus gallus GN=LSG1 PE=2 SV=1
Length = 653
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 22 NIRLCDCPGLVFPSKVPKPL--QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKV 79
N+ L P + S + L + VSVS TPG TKHFQT+++ + LCDCPGLV PS V
Sbjct: 383 NVGLVGYPNVGKSSTINTILGDKKVSVSATPGRTKHFQTLYVEPGLCLCDCPGLVMPSFV 442
Query: 80 PKPLQVL-MGSFPIAQLRE---PYSTV-----QYLAERMDLIKLLHIKHPDD-DEYWCAM 129
+++ G PI Q+R+ P S V + + E I ++ + +D D A
Sbjct: 443 STKAEMICSGILPIDQMRDHVPPISLVCQHIPRNILEATYGINIIRPREDEDPDRKPTAE 502
Query: 130 DICDGWAQKRSYMTAKTGRYDSYRAANELLRMATEGRICLCLMPP 174
++ + R +MTA G+ D R+A +L+ G++ C PP
Sbjct: 503 ELLTAYGYMRGFMTAH-GQPDQPRSARYVLKDYVSGKLLYCHPPP 546
>sp|Q4R8L2|LSG1_MACFA Large subunit GTPase 1 homolog OS=Macaca fascicularis GN=LSG1 PE=2
SV=1
Length = 653
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVL-MGSFPIAQLREPYSTV 102
VSVS TPGHTKHFQT+++ + LCDCPGLV PS V ++ G PI Q+R+ V
Sbjct: 413 VSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPV 472
Query: 103 QYLAER-----MDLIKLLHIKHPDDDEY----WCAMDICDGWAQKRSYMTAKTGRYDSYR 153
+ + ++ ++I P +DE + ++ + R +MTA G+ D R
Sbjct: 473 SLVCQNIPRHVLEATYGINIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAH-GQPDQPR 531
Query: 154 AANELLRMATEGRICLCLMPP 174
+A +L+ G++ C PP
Sbjct: 532 SARYILKDYVNGKLLYCHPPP 552
>sp|Q2YDM7|LSG1_BOVIN Large subunit GTPase 1 homolog OS=Bos taurus GN=LSG1 PE=2 SV=1
Length = 652
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVL-MGSFPIAQLREPYSTV 102
VSVS TPGHTKHFQT+++ + LCDCPGLV PS V +++ G PI Q+R+ V
Sbjct: 406 VSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPV 465
Query: 103 QYLAER-----MDLIKLLHIKHPDDDEY----WCAMDICDGWAQKRSYMTAKTGRYDSYR 153
+ + ++ + I P +DE + ++ + R +MTA G+ D R
Sbjct: 466 SLVCQNIPRHVLEATYGIDIIKPREDEDPRRPPTSEELLTAYGCMRGFMTAH-GQPDQPR 524
Query: 154 AANELLRMATEGRICLCLMPP 174
+A +L+ G++ C PP
Sbjct: 525 SARYILKDYVNGKLLYCHPPP 545
>sp|Q9H089|LSG1_HUMAN Large subunit GTPase 1 homolog OS=Homo sapiens GN=LSG1 PE=1 SV=2
Length = 658
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 44 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVL-MGSFPIAQLREPYSTV 102
VSVS TPGHTKHFQT+++ + LCDCPGLV PS V ++ G PI Q+R+ V
Sbjct: 412 VSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPV 471
Query: 103 QYLAER-----MDLIKLLHIKHPDDDEY----WCAMDICDGWAQKRSYMTAKTGRYDSYR 153
+ + ++ ++I P +DE + ++ + R +MTA G+ D R
Sbjct: 472 SLVCQNIPRHVLEATYGINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAH-GQPDQPR 530
Query: 154 AANELLRMATEGRICLCLMPP 174
+A +L+ G++ C PP
Sbjct: 531 SARYILKDYVSGKLLYCHPPP 551
>sp|Q8MT06|GNL3_DROME Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila
melanogaster GN=ns1 PE=1 SV=2
Length = 581
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 46 VSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTVQYL 105
V TPG TK Q + L I+L DCPG+VF S VL + + +++P++ + +
Sbjct: 295 VGSTPGVTKSMQEVELDSKIKLIDCPGIVFTSGGENSHAVLKNAQRVGDVKDPFTIAESV 354
Query: 106 AERMDLIKLLHIKHPDDDEYWCAM-DIC--DGWAQKRSYMTAKTGRY------DSYRAAN 156
+R EY+C M DI D + + + A+ G++ D AA
Sbjct: 355 LKRA------------SKEYFCTMYDITNYDTFEEFFAKKAARMGKFLKKGVPDVVAAAR 402
Query: 157 ELLRMATEGRICLCLMPPQYLSKQGV 182
+L G+I C PP+ Q V
Sbjct: 403 SVLNDWNTGKIKYCTQPPEVQEGQSV 428
>sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=2
Length = 728
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+V +V+ G TK +Q I L I L DCPG+V+PS+ + VL G + +++ P
Sbjct: 334 KVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKAPQDH 393
Query: 102 VQYLAERMDLIKLLHIKHPDDDEYW-CAMDICDGWAQKRSYMTAKTGRYDSYRAANELLR 160
+ + ER K +I E W A D + A R+ K G D + +L
Sbjct: 394 IGAVLERA---KPEYISKTYKIESWENAEDFLEKLAL-RTGKLLKGGEPDMLTVSKMVLN 449
Query: 161 MATEGRICLCLMPP 174
GRI + PP
Sbjct: 450 DWQRGRIPFFVKPP 463
Score = 34.7 bits (78), Expect = 0.36, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSK 36
V +V+ G TK +Q I L I L DCPG+V+PS+
Sbjct: 335 VCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSE 370
>sp|Q6PGG6|GNL3L_MOUSE Guanine nucleotide-binding protein-like 3-like protein OS=Mus
musculus GN=Gnl3l PE=1 SV=1
Length = 577
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 22/139 (15%)
Query: 45 SVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTVQY 104
SV PG TK Q ++L IRL D PG+V P + +L + +L +P + V+
Sbjct: 273 SVGAVPGVTKFMQEVYLDKFIRLLDAPGIV-PGPNSEVGTILRNCIHVQKLADPVTPVET 331
Query: 105 LAERMDLIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTA---------KTGRYDSYRAA 155
+ +R +L ++ Y+ G+ ++TA K G Y +AA
Sbjct: 332 ILQRCNLEEI--------SSYYGV----SGFQTTEHFLTAVAHRLGKKKKGGVYSQEQAA 379
Query: 156 NELLRMATEGRICLCLMPP 174
+L G+I +PP
Sbjct: 380 KAVLADWVSGKISFYTLPP 398
Score = 33.5 bits (75), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 3 SVSRTPGHTKHFQTIFLTDNIRLCDCPGLV 32
SV PG TK Q ++L IRL D PG+V
Sbjct: 273 SVGAVPGVTKFMQEVYLDKFIRLLDAPGIV 302
>sp|Q54KS4|GNL3_DICDI Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium
discoideum GN=gnl3 PE=3 SV=1
Length = 615
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 39 KPLQVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREP 98
K + V V TPG TK Q + L N++L D PG+V +L + ++ +P
Sbjct: 284 KRTRSVGVGATPGFTKFAQEVHLDKNVKLLDSPGIVPIKGNVDENIILRNVVKLEKVLDP 343
Query: 99 YSTVQYLAERMDLIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTAKTGRYDSYRAANEL 158
+ V + R ++L I + +Y D A KR + K G D A +
Sbjct: 344 IAPVDAILSRCSQKQILDIY--EIAQYQSTTDFLTQVAAKRKKIV-KGGIADLRSTAISV 400
Query: 159 LRMATEGRICLCLMPPQYLSK 179
+R T G+I PP+ L K
Sbjct: 401 IRDWTGGKIPFYTQPPKVLVK 421
Score = 34.3 bits (77), Expect = 0.61, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 2 VSVSRTPGHTKHFQTIFLTDNIRLCDCPGLV 32
V V TPG TK Q + L N++L D PG+V
Sbjct: 289 VGVGATPGFTKFAQEVHLDKNVKLLDSPGIV 319
>sp|Q3T0J9|GNL3L_BOVIN Guanine nucleotide-binding protein-like 3-like protein OS=Bos
taurus GN=GNL3L PE=2 SV=1
Length = 575
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 22/139 (15%)
Query: 45 SVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTVQY 104
SV PG TK Q ++L IRL D PG+V P + +L + +L +P + V+
Sbjct: 272 SVGAVPGVTKFMQEVYLDKFIRLLDAPGIV-PGPNSEVGTILRNCIHVQKLADPVTPVET 330
Query: 105 LAERMDLIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTA---------KTGRYDSYRAA 155
+ +R +L ++ Y+ G+ ++TA K G Y +AA
Sbjct: 331 ILQRCNLEEI--------SSYYG----VSGFQTTEHFLTAVAHRLGKKKKGGIYSQEQAA 378
Query: 156 NELLRMATEGRICLCLMPP 174
+L G+I +PP
Sbjct: 379 KAVLADWVSGKISFYTLPP 397
Score = 33.5 bits (75), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 3 SVSRTPGHTKHFQTIFLTDNIRLCDCPGLV 32
SV PG TK Q ++L IRL D PG+V
Sbjct: 272 SVGAVPGVTKFMQEVYLDKFIRLLDAPGIV 301
>sp|B8GTD2|ENGB_THISH Probable GTP-binding protein EngB OS=Thioalkalivibrio sp. (strain
HL-EbGR7) GN=engB PE=3 SV=1
Length = 209
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 29/153 (18%)
Query: 43 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTV 102
+ S+TPG T+ L ++ RL D PG + +KVP+ +R+ + +
Sbjct: 51 LARTSKTPGRTQLINFFALDESRRLVDLPGYGY-AKVPEA------------MRKAWRKL 97
Query: 103 --QYLAERM---DLIKLLHIKHPDDDEYWCAMDICDGWAQKRSYM-------TAKTGRYD 150
YL ER L+ ++ I+HP D W + GWA++R K R
Sbjct: 98 MEHYLGERACLKGLVVVMDIRHPLTDHDWTML----GWARERGLAVHVLLTKADKIRRGP 153
Query: 151 SYRAANELLRMATEGRICLCLMPPQYLSKQGVS 183
+ A ++ R + I + P L ++GV
Sbjct: 154 AMDTARQVARALGDAGIEATVQPFSALKREGVE 186
>sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG2
PE=3 SV=1
Length = 502
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLM-GSFPIAQLREPYS 100
+V V+ PG TK +Q I L I L DCPG+V PS +L G + + P
Sbjct: 338 KVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSAKDTEEDILFRGVVRVEHVSHPE- 396
Query: 101 TVQYLAERMDLIKLLHIKHPDDDEYWC-AMDICDGWAQKRSYMTAKTGRYDSYRAANELL 159
QY+ + K H++ + W A + + A+K+ + K G D A ++L
Sbjct: 397 --QYIPAVLRRCKRHHLERTYEISGWADATEFIEMLARKQGRLL-KGGEPDETGVAKQVL 453
Query: 160 RMATEGRICLCLMPPQYLSKQGVSKHSRPA 189
G+I + PP + SK RPA
Sbjct: 454 NDFNRGKIPWFVSPPDRDPQPETSK--RPA 481
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPS 35
V V+ PG TK +Q I L I L DCPG+V PS
Sbjct: 339 VCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPS 373
>sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1
Length = 731
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+V +V+ G TK +Q I L I L DCPG+V+PS+ + VL G + +++ P
Sbjct: 334 KVCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDH 393
Query: 102 VQYLAERMDLIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTAKT---GRYDSYRAANEL 158
+ + ER K +I + W + + + +K ++ T K G D +
Sbjct: 394 IGAVLERA---KPEYISKTYKIDSW---ENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMV 447
Query: 159 LRMATEGRICLCLMPP 174
L GRI + PP
Sbjct: 448 LNDWQRGRIPFFVKPP 463
Score = 35.0 bits (79), Expect = 0.31, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSK 36
V +V+ G TK +Q I L I L DCPG+V+PS+
Sbjct: 335 VCNVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSE 370
>sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG2 PE=3 SV=1
Length = 494
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLM-GSFPIAQLREPYS 100
+V V+ PG TK +Q I L I L DCPG+V PS +L G + + P
Sbjct: 339 KVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSTKDSEEDILFRGVVRVEHVSHPE- 397
Query: 101 TVQYLAERMDLIKLLHIKHPDDDEYWC-AMDICDGWAQKRSYMTAKTGRYDSYRAANELL 159
QY+ + + H++ + W A D + A+K+ + K G D + ++L
Sbjct: 398 --QYIPGVLKRCQTKHLERTYEISGWKDATDFIEMLARKQGRL-LKGGEPDESGVSKQIL 454
Query: 160 RMATEGRICLCLMPPQ 175
G+I ++PP+
Sbjct: 455 NDFNRGKIPWFVIPPE 470
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPS 35
V V+ PG TK +Q I L I L DCPG+V PS
Sbjct: 340 VCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPS 374
>sp|Q9NVN8|GNL3L_HUMAN Guanine nucleotide-binding protein-like 3-like protein OS=Homo
sapiens GN=GNL3L PE=1 SV=1
Length = 582
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 22/139 (15%)
Query: 45 SVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTVQY 104
SV PG TK Q ++L IRL D PG+V P + +L + +L +P + V+
Sbjct: 279 SVGAVPGITKFMQEVYLDKFIRLLDAPGIV-PGPNSEVGTILRNCVHVQKLADPVTPVET 337
Query: 105 LAERMDLIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTA---------KTGRYDSYRAA 155
+ +R +L ++ Y+ G+ ++TA K G Y +AA
Sbjct: 338 ILQRCNLEEI--------SNYYG----VSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAA 385
Query: 156 NELLRMATEGRICLCLMPP 174
+L G+I + PP
Sbjct: 386 KAVLADWVSGKISFYIPPP 404
Score = 33.5 bits (75), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 3 SVSRTPGHTKHFQTIFLTDNIRLCDCPGLV 32
SV PG TK Q ++L IRL D PG+V
Sbjct: 279 SVGAVPGITKFMQEVYLDKFIRLLDAPGIV 308
>sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG2 PE=3 SV=1
Length = 513
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLM-GSFPIAQLREPYS 100
+V V+ PG TK +Q I L I L DCPG+V PS +L G + + P
Sbjct: 338 KVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPE- 396
Query: 101 TVQYLAERMDLIKLLHIKHPDDDEYWC-AMDICDGWAQKRSYMTAKTGRYDSYRAANELL 159
QY+ + K H++ + W ++D + A+K+ + K G D + ++L
Sbjct: 397 --QYIPGILKRCKRQHLERTYEISGWKDSVDFIEMIARKQGRLL-KGGEPDESGVSKQIL 453
Query: 160 RMATEGRICLCLMPPQ 175
G+I + PP+
Sbjct: 454 NDFNRGKIPWFVPPPE 469
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPS 35
V V+ PG TK +Q I L I L DCPG+V PS
Sbjct: 339 VCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPS 373
>sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=NOG2 PE=3 SV=1
Length = 509
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Query: 50 PGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLM-GSFPIAQLREPYSTVQYLAER 108
PG TK +Q I L I L DCPG+V PS+ +L G + + P + L ER
Sbjct: 339 PGETKVWQYITLMKRIFLIDCPGIVPPSQKDSETDILFRGVVRVEHVSYPEQYIPALLER 398
Query: 109 MDLIKLLHIKHPDDDEYWC-AMDICDGWAQKRSYMTAKTGRYDSYRAANELLRMATEGRI 167
+ H++ + W A + + A+K + K G D A +L G+I
Sbjct: 399 CE---TKHLERTYEVSGWSNATEFLEKIARKHGRLL-KGGEPDESGIAKLILNDFNRGKI 454
Query: 168 CLCLMPPQ 175
+ PPQ
Sbjct: 455 PWFVPPPQ 462
Score = 33.9 bits (76), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 8 PGHTKHFQTIFLTDNIRLCDCPGLVFPSK 36
PG TK +Q I L I L DCPG+V PS+
Sbjct: 339 PGETKVWQYITLMKRIFLIDCPGIVPPSQ 367
>sp|Q6TGJ8|NOG2_CRYGA Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3
SV=1
Length = 731
Score = 40.0 bits (92), Expect = 0.010, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 39 KPLQVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLV-FPSKVPKPLQVLMGSFPIAQLRE 97
K +V +V+ PG TK +Q I L I L DCPG+V +K VL G + L
Sbjct: 359 KKKKVCTVAPIPGETKVWQYITLMRRIYLIDCPGIVPVSAKDSDTDTVLKGVVRVENLAT 418
Query: 98 PYSTVQYLAERMD---LIKLLHIKHPDDDEY--WCAMDICDGWAQKRSYMTAKTGRYDSY 152
P + L ER+ L + +++H + + A I A+K + K G D
Sbjct: 419 PAEHIPALLERVRPEYLERTYNLEHVEGGWHGEQGATVILTAIAKKSGKLL-KGGEPDQE 477
Query: 153 RAANELLRMATEGRICLCLMPP 174
AA +L G+I + PP
Sbjct: 478 AAAKMVLNDWIRGKIPFFVAPP 499
Score = 33.5 bits (75), Expect = 0.88, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLV 32
V +V+ PG TK +Q I L I L DCPG+V
Sbjct: 363 VCTVAPIPGETKVWQYITLMRRIYLIDCPGIV 394
>sp|Q21086|GNL3_CAEEL Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis
elegans GN=nst-1 PE=3 SV=1
Length = 556
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 13/145 (8%)
Query: 45 SVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPS-KVPKPLQV-LMGSFPIAQLREPYSTV 102
+V PG TK Q + L NIRL D PG++ S K P++V L + + L +P + V
Sbjct: 286 NVGNLPGITKEIQEVELDKNIRLIDSPGVILVSQKDLDPIEVALKNAIRVDNLLDPIAPV 345
Query: 103 QYLAER--MDLIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTAKTGRYDSYRAANELLR 160
+ R + I +LH D + ++D +R + R D AA +L
Sbjct: 346 HAILRRCSKETI-MLHYNLAD----FNSVDQFLAQLARRIGKLRRGARPDVNAAAKRVLN 400
Query: 161 MATEGRICLCLMPPQYLSKQGVSKH 185
G++ PP+ QG +K
Sbjct: 401 DWNTGKLRYYTHPPE----QGTAKE 421
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 3 SVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSK 36
+V PG TK Q + L NIRL D PG++ S+
Sbjct: 286 NVGNLPGITKEIQEVELDKNIRLIDSPGVILVSQ 319
>sp|Q7SHR8|NOG2_NEUCR Nucleolar GTP-binding protein 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nog-2 PE=3 SV=1
Length = 619
Score = 39.7 bits (91), Expect = 0.014, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 43 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLM-GSFPIAQLREPYST 101
V V+ PG TK +Q + L I L DCPG+V P++ P +L+ G + + P
Sbjct: 350 VAKVAPIPGETKVWQYVTLMRRIYLIDCPGIVPPNQNDTPQDLLLRGVVRVENVDNPE-- 407
Query: 102 VQYLAERMDLIKLLHIKHPDDDEYW 126
QY+ ++ +K H++ + + W
Sbjct: 408 -QYIPAVLNKVKPHHMERTYELKGW 431
Score = 35.8 bits (81), Expect = 0.20, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKP 40
V V+ PG TK +Q + L I L DCPG+V P++ P
Sbjct: 350 VAKVAPIPGETKVWQYVTLMRRIYLIDCPGIVPPNQNDTP 389
>sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2
PE=2 SV=1
Length = 483
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLM-GSFPIAQLREPYS 100
+V + + PG TK +Q + +T I + DCPG+V P+ ++++ G+ I ++ P
Sbjct: 316 KVCNTAPIPGETKVWQYVRMTSKIFMIDCPGIVPPNSNDSETEIIIKGALRIEKVSNPE- 374
Query: 101 TVQYLAERMDLIKLLHIKHPDDDEYWC--AMDICDGWAQKRSYMTAKTGRYDSYRAANEL 158
QY+ ++L + H++ W + + A+K + K G D A +
Sbjct: 375 --QYIHAILNLCETKHLERTYQISGWENDSTKFIELLARKTGKL-LKGGEVDESSIAKMV 431
Query: 159 LRMATEGRICLCLMPPQ 175
+ G+I + P Q
Sbjct: 432 INDFIRGKIPWFIAPAQ 448
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 8 PGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVV 44
PG TK +Q + +T I + DCPG+V P+ +++
Sbjct: 324 PGETKVWQYVRMTSKIFMIDCPGIVPPNSNDSETEII 360
>sp|J9VQ03|NOG2_CRYNH Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=NOG2 PE=3 SV=2
Length = 720
Score = 39.3 bits (90), Expect = 0.018, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 39 KPLQVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLV-FPSKVPKPLQVLMGSFPIAQLRE 97
K +V +V+ PG TK +Q I L I L DCPG+V +K VL G + L
Sbjct: 349 KKKKVCTVAPIPGETKVWQYITLMRRIYLIDCPGIVPVSAKDSDTDTVLKGVVRVENLAT 408
Query: 98 PYSTVQYLAERM------DLIKLLHIK---HPDDDEYWCAMDICDGWAQKRSYMTAKTGR 148
P + L ER+ L H++ H ++ + I K+S K G
Sbjct: 409 PAEHIPALLERVRPEYLERTYGLEHVEGGWHGEEGATFVLTAIA-----KKSGKLLKGGE 463
Query: 149 YDSYRAANELLRMATEGRICLCLMPP 174
D AA +L G++ + PP
Sbjct: 464 PDQEAAAKMVLNDWIRGKVPFFVAPP 489
Score = 33.5 bits (75), Expect = 0.88, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLV 32
V +V+ PG TK +Q I L I L DCPG+V
Sbjct: 353 VCTVAPIPGETKVWQYITLMRRIYLIDCPGIV 384
>sp|P0CS94|NOG2_CRYNV Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii GN=NOG2 PE=3 SV=1
Length = 693
Score = 38.9 bits (89), Expect = 0.021, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 39 KPLQVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLV-FPSKVPKPLQVLMGSFPIAQLRE 97
K +V +V+ PG TK +Q I L I L DCPG+V +K VL G + L
Sbjct: 322 KKKKVCTVAPIPGETKVWQYITLMRRIYLIDCPGIVPVSAKDSDTDTVLKGVVRVENLAT 381
Query: 98 PYSTVQYLAERM------DLIKLLHIK---HPDDDEYWCAMDICDGWAQKRSYMTAKTGR 148
P + L ER+ L H++ H ++ + I K+S K G
Sbjct: 382 PAEHIPALLERVRPEYLERTYGLEHVEGGWHGEEGATFVLTAIA-----KKSGKLLKGGE 436
Query: 149 YDSYRAANELLRMATEGRICLCLMPP 174
D AA +L G++ + PP
Sbjct: 437 PDQEAAAKMVLNDWIRGKVPFFVAPP 462
Score = 33.5 bits (75), Expect = 0.93, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLV 32
V +V+ PG TK +Q I L I L DCPG+V
Sbjct: 326 VCTVAPIPGETKVWQYITLMRRIYLIDCPGIV 357
>sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG2 PE=1 SV=1
Length = 486
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLM-GSFPIAQLREPYS 100
+V V+ PG TK +Q I L I L DCPG+V PS +L G + + P
Sbjct: 339 KVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVTHPE- 397
Query: 101 TVQYLAERMDLIKLLHIKHPDDDEYWC-AMDICDGWAQKRSYMTAKTGRYDSYRAANELL 159
QY+ + ++ H++ + W A + + A+K+ + K G D + ++L
Sbjct: 398 --QYIPGVLKRCQVKHLERTYEISGWKDATEFIEILARKQGRLL-KGGEPDESGVSKQIL 454
Query: 160 RMATEGRI 167
G+I
Sbjct: 455 NDFNRGKI 462
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPS 35
V V+ PG TK +Q I L I L DCPG+V PS
Sbjct: 340 VCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPS 374
>sp|A8FPD5|ENGB_SHESH Probable GTP-binding protein EngB OS=Shewanella sediminis (strain
HAW-EB3) GN=engB PE=3 SV=1
Length = 220
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 14/84 (16%)
Query: 43 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTV 102
+ SRTPG T+ L +N RL D PG F ++VP L+ + S
Sbjct: 58 LARTSRTPGRTQLINIFELDENRRLVDLPGYGF-AQVPLALKK----------KWQESLG 106
Query: 103 QYLAERM---DLIKLLHIKHPDDD 123
+YL ER ++ L+ I+HP D
Sbjct: 107 EYLQERQCLGGMVVLMDIRHPLKD 130
>sp|C6DJE1|ENGB_PECCP Probable GTP-binding protein EngB OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=engB PE=3 SV=1
Length = 211
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 14/80 (17%)
Query: 47 SRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTVQYLA 106
S+TPG T+ +TD +RL D PG + ++VP+ +++ + + +YL
Sbjct: 57 SKTPGRTQLINLFEVTDGVRLVDLPGYGY-AEVPEQMKI----------KWQRALGEYLQ 105
Query: 107 ERMD---LIKLLHIKHPDDD 123
+R L+ L+ I+HP D
Sbjct: 106 KRNSLKGLVVLMDIRHPLKD 125
Score = 33.9 bits (76), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 5 SRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQV 43
S+TPG T+ +TD +RL D PG + ++VP+ +++
Sbjct: 57 SKTPGRTQLINLFEVTDGVRLVDLPGYGY-AEVPEQMKI 94
>sp|A1AVN1|ENGB_RUTMC Probable GTP-binding protein EngB OS=Ruthia magnifica subsp.
Calyptogena magnifica GN=engB PE=3 SV=1
Length = 199
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQ 84
++ VSRTPG T+HF L + RL D PG + +KVPK ++
Sbjct: 50 KLAKVSRTPGKTQHFVFFELDKDRRLVDLPGYGY-AKVPKRVK 91
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQ 42
+ VSRTPG T+HF L + RL D PG + +KVPK ++
Sbjct: 51 LAKVSRTPGKTQHFVFFELDKDRRLVDLPGYGY-AKVPKRVK 91
>sp|C3K6T0|ENGB_PSEFS Probable GTP-binding protein EngB OS=Pseudomonas fluorescens
(strain SBW25) GN=engB PE=3 SV=1
Length = 213
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 43 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTV 102
+ S+TPG T+ L D+ RL D PG + +KVP PL +L
Sbjct: 56 LARTSKTPGRTQLLNFFKLDDDRRLVDLPGYGY-AKVPIPL----------KLHWQRHLE 104
Query: 103 QYLAERMD---LIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTAKTGRYDSYRAANELL 159
YL R LI ++ I+HP D +D + K + A N LL
Sbjct: 105 AYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLL 164
Query: 160 RMATEGR 166
++ +E R
Sbjct: 165 KVQSEIR 171
Score = 33.5 bits (75), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQV 43
+ S+TPG T+ L D+ RL D PG + +KVP PL++
Sbjct: 56 LARTSKTPGRTQLLNFFKLDDDRRLVDLPGYGY-AKVPIPLKL 97
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nog2 PE=1 SV=1
Length = 537
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLM 87
+V +V+ PG TK +Q + L I L DCPG+V PS ++L+
Sbjct: 334 KVCNVAPIPGETKVWQYVALMKRIFLIDCPGIVPPSSNDSDAELLL 379
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPS 35
V +V+ PG TK +Q + L I L DCPG+V PS
Sbjct: 335 VCNVAPIPGETKVWQYVALMKRIFLIDCPGIVPPS 369
>sp|Q48PV6|ENGB_PSE14 Probable GTP-binding protein EngB OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=engB PE=3 SV=1
Length = 211
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 43 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTV 102
+ S+TPG T+ L ++ RL D PG + +KVP PL +L
Sbjct: 56 LARTSKTPGRTQLLNFFGLDEDRRLVDLPGYGY-AKVPIPL----------KLHWQRHLE 104
Query: 103 QYLAERMD---LIKLLHIKHPDDDEYWCAMDICDGWAQKRSYMTAKTGRYDSYRAANELL 159
YL R LI ++ I+HP D +D + K + A N LL
Sbjct: 105 AYLGSRESLKGLILMMDIRHPMTDFDLLMLDWAIASNMPMHILLTKADKLTYGAAKNTLL 164
Query: 160 RMATEGR 166
++ TE R
Sbjct: 165 KVQTEIR 171
>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NUG1 PE=1 SV=1
Length = 520
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 46 VSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQV-------LMGSFPIAQLREP 98
V G T + I + + +++ D PG+ FPS+ K +V L+ + P + +P
Sbjct: 313 VGNEAGVTTSLREIKIDNKLKILDSPGICFPSENKKRSKVEHEAELALLNALPAKHIVDP 372
Query: 99 YSTVQYLAERM 109
Y V L +R+
Sbjct: 373 YPAVLMLVKRL 383
>sp|Q48A63|ENGB_COLP3 Probable GTP-binding protein EngB OS=Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) GN=engB PE=3 SV=1
Length = 224
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 24/97 (24%)
Query: 46 VSRTPGHTKHFQTIFLTDNIRLCDCPGLVF---PSKVPKPLQVLMGSFPIAQLREPYSTV 102
+S+TPG T+ + +N RL D PG F P + K Q +G
Sbjct: 57 ISKTPGRTQLINVFEVAENRRLIDLPGYGFAQVPLAMKKKWQKALG-------------- 102
Query: 103 QYLAERM---DLIKLLHIKHPDDDEYWCAMDICDGWA 136
+YL +R L+ L+ I+HP D MD+ WA
Sbjct: 103 EYLEKRQCLKGLVVLMDIRHPLKD---LDMDLIQ-WA 135
>sp|Q604E1|ENGB_METCA Probable GTP-binding protein EngB OS=Methylococcus capsulatus
(strain ATCC 33009 / NCIMB 11132 / Bath) GN=engB PE=3
SV=1
Length = 210
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Query: 43 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTV 102
+ VS+TPG T+ + D RL D PG + +KVP + R +
Sbjct: 51 LARVSKTPGRTRMINFFSIDDGRRLVDLPGYGY-AKVPGEI----------HRRWEAALE 99
Query: 103 QYLAERMDL---IKLLHIKHP--DDDEY---WCA 128
QYL R L L+ ++HP + DE WCA
Sbjct: 100 QYLRYRQSLRGVFLLMDVRHPFTEMDEVMIEWCA 133
>sp|A5CXJ4|ENGB_VESOH Probable GTP-binding protein EngB OS=Vesicomyosocius okutanii
subsp. Calyptogena okutanii (strain HA) GN=engB PE=3
SV=1
Length = 199
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQV 85
++ VSRTPG T+H L + RL D PG + +KVP+ ++V
Sbjct: 50 KLAKVSRTPGRTQHLVFFELDKDRRLADLPGYGY-AKVPEHIKV 92
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 1 VVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQV 43
+ VSRTPG T+H L + RL D PG + +KVP+ ++V
Sbjct: 51 LAKVSRTPGRTQHLVFFELDKDRRLADLPGYGY-AKVPEHIKV 92
>sp|Q58859|Y1464_METJA Uncharacterized GTP-binding protein MJ1464 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1464 PE=3 SV=1
Length = 373
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 49 TPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTVQYLAER 108
G TK Q + LT NI+L D PG V + L V+ G+ + ++ P + R
Sbjct: 141 VAGLTKGEQWVRLTKNIKLMDTPG-VLEMRDEDDL-VISGALRLEKVENPIPPALKILSR 198
Query: 109 MD-----LIK-LLHIKHPDDDEYWCAMDICDGWAQKRSYMTAKTGRYDSYRAANELLRMA 162
++ +IK + + + DE ++ KRSY+T K G D R A +++
Sbjct: 199 INNFDNSIIKEYFGVDYEEVDE-----ELLKKIGNKRSYLT-KGGEVDLVRTAKTIIKEY 252
Query: 163 TEGRI 167
+G++
Sbjct: 253 QDGKL 257
>sp|B4S284|ENGB_ALTMD Probable GTP-binding protein EngB OS=Alteromonas macleodii (strain
DSM 17117 / Deep ecotype) GN=engB PE=3 SV=1
Length = 212
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 42 QVVSVSRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYST 101
+ S+TPG T+ L + +RL D PG F +KVP V M A L E
Sbjct: 49 NLARTSKTPGRTQLINVFELEEELRLVDLPGYGF-AKVP----VAMKKKWQASLGE---- 99
Query: 102 VQYLAERMD---LIKLLHIKHPDDD 123
YL +R L+ L+ I+HP D
Sbjct: 100 --YLQKRKSLKGLVVLMDIRHPFKD 122
>sp|B1JR12|ENGB_YERPY Probable GTP-binding protein EngB OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=engB PE=3 SV=1
Length = 216
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 14/80 (17%)
Query: 47 SRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTVQYLA 106
S+TPG T+ + D +RL D PG + ++VP+ + +L+ + +YL
Sbjct: 58 SKTPGRTQLINLFEVVDGVRLVDLPGYGY-AEVPEEM----------KLKWQRALGEYLQ 106
Query: 107 ER---MDLIKLLHIKHPDDD 123
+R L+ L+ I+HP D
Sbjct: 107 KRNCLKGLVVLMDIRHPLKD 126
>sp|Q66GG3|ENGB_YERPS Probable GTP-binding protein EngB OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=engB PE=3 SV=1
Length = 216
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 14/80 (17%)
Query: 47 SRTPGHTKHFQTIFLTDNIRLCDCPGLVFPSKVPKPLQVLMGSFPIAQLREPYSTVQYLA 106
S+TPG T+ + D +RL D PG + ++VP+ + +L+ + +YL
Sbjct: 58 SKTPGRTQLINLFEVVDGVRLVDLPGYGY-AEVPEEM----------KLKWQRALGEYLQ 106
Query: 107 ER---MDLIKLLHIKHPDDD 123
+R L+ L+ I+HP D
Sbjct: 107 KRNCLKGLVVLMDIRHPLKD 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,704,559
Number of Sequences: 539616
Number of extensions: 2847374
Number of successful extensions: 7239
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 7109
Number of HSP's gapped (non-prelim): 198
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)