Diaphorina citri psyllid: psy358


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
MKLSSLPLCCMILVLNGLKNAVNCAVTKENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICEKLKKSDSQICDLRYDKQIDFKTVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEELKPKYVREEL
ccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccHHHHccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccc
***SSLPLCCMILVLNGLKNAVNCAVTKENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICEKLKKSDSQICDLRYDKQIDFKTVDLKKLKVRDLKKILNDWEEECDGCLEKGDFIKRIEEL*********
xxxxxxxxxxxxxxxxxxxxHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKLSSLPLCCMILVLNGLKNAVNCAVTKENCEVCVTVVEKFADRLTPEAKADTKEIEKAFKKWCKGTKGKENRFCYYLGGLEESATGILGELSKPLSWGMPATKICEKLKKSDSQICDLRYDKQIDFKTxxxxxxxxxxxxxxxxxxxxxxxxxxxxGDFIKRIEELKPKYVREEL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Mesencephalic astrocyte-derived neurotrophic factor homolog Required during the maturation of the embryonic nervous system for maintenance of neuronal and cuticular connectivity. Essential for maintenance of dopaminergic neurons and dopamine levels.very confidentQ9XZ63
Mesencephalic astrocyte-derived neurotrophic factor homolog Required during the maturation of the embryonic nervous system for maintenance of neuronal and cuticular connectivity. Essential for maintenance of dopaminergic neurons and dopamine levels.very confidentQ295V5
Mesencephalic astrocyte-derived neurotrophic factor Selectively promotes the survival of dopaminergic neurons of the ventral mid-brain. Modulates GABAergic transmission to the dopaminergic neurons of the substantia nigra. Enhances spontaneous, as well as evoked, GABAergic inhibitory postsynaptic currents in dopaminergic neurons (By similarity). Inhibits cell proliferation and endoplasmic reticulum (ER) stress-induced cell death.very confidentP55145

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0031175 [BP]neuron projection developmentprobableGO:0032502, GO:0030030, GO:0030154, GO:0048468, GO:0007275, GO:0071840, GO:0048869, GO:0016043, GO:0008150, GO:0044699, GO:0048666, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0044763, GO:0022008, GO:0048699, GO:0044707, GO:0007399, GO:0048856, GO:0048731
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0070050 [BP]neuron homeostasisprobableGO:0019725, GO:0060249, GO:0009987, GO:0042592, GO:0065007, GO:0044763, GO:0008150, GO:0065008, GO:0044699
GO:0005615 [CC]extracellular spaceprobableGO:0005575, GO:0005576, GO:0044421
GO:0002014 [BP]vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressureprobableGO:0035150, GO:0003073, GO:0050880, GO:0001980, GO:0044707, GO:0045777, GO:0050877, GO:0032501, GO:0003084, GO:0008015, GO:0090066, GO:0003013, GO:0003018, GO:0001976, GO:0008217, GO:0008150, GO:0042310, GO:0065007, GO:0065008, GO:0044699, GO:0003008
GO:0006986 [BP]response to unfolded proteinprobableGO:0050896, GO:0006950, GO:0035966, GO:0008150, GO:0042221, GO:0010033
GO:0008083 [MF]growth factor activityprobableGO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0071542 [BP]dopaminergic neuron differentiationprobableGO:0032502, GO:0048699, GO:0009987, GO:0030182, GO:0007399, GO:0044707, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0022008, GO:0007275, GO:0044699, GO:0048856

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2W51, chain A
Confidence level:very confident
Coverage over the Query: 26-161
View the alignment between query and template
View the model in PyMOL