RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy359
(405 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 55.0 bits (133), Expect = 6e-11
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYR-IHTGEKPYQCDI 375
+PY C C K F + +HL H + +HT E+P++C +
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 46.5 bits (111), Expect = 4e-08
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTR-THTGEKPYAC 219
+ + C C K F R HL H + HT E+P+ C
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 39.2 bits (92), Expect = 2e-05
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 366 TGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
+ KPY C CG+GF++ + + H + VH
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29
Score = 33.8 bits (78), Expect = 0.002
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 212 TGEKPYACYLCDKRFAQISDRIKHLKSSH 240
+ KPY C C K F++ H+K H
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29
Score = 26.9 bits (60), Expect = 0.54
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 280 FKCDLCGNILSSKHILQEHVRVVHMG 305
+ C CG S L H++ VH
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTS 31
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 50.4 bits (121), Expect = 2e-09
Identities = 17/32 (53%), Positives = 19/32 (59%)
Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
R H+GEKPY+C IC F QS MK H H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 44.6 bits (106), Expect = 2e-07
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 209 RTHTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
RTH+GEKPY CY+C RF Q H+ H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 38.8 bits (91), Expect = 3e-05
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 335 RLHFPLRPYACTQCDKTFKKKNHLTTHY-RIHTGE 368
R H +PY C C F + + H + HT
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 35.3 bits (82), Expect = 4e-04
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
H+ E+ + C C F + +K+H E
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 23.4 bits (51), Expect = 8.3
Identities = 4/23 (17%), Positives = 8/23 (34%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAH 151
Y C C + ++ +H
Sbjct: 9 YECYICHARFTQSGTMKMHILQK 31
Score = 23.0 bits (50), Expect = 9.5
Identities = 4/24 (16%), Positives = 11/24 (45%)
Query: 280 FKCDLCGNILSSKHILQEHVRVVH 303
++C +C + ++ H+ H
Sbjct: 9 YECYICHARFTQSGTMKMHILQKH 32
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 49.3 bits (118), Expect = 4e-09
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 343 YACTQ--CDKTFKKKNHLTTHYRIHTGEKPYQCD 374
++C + C K+F K HL H ++H+ + Y C+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 46.3 bits (110), Expect = 7e-08
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 190 PCTFCEKSFKRKLHLKVHTRTHTGEKPYAC 219
P C KSF K HLK H + H+ + Y C
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 24.3 bits (53), Expect = 3.4
Identities = 6/24 (25%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 371 YQCD--ICGRGFAQSNDMKKHRRT 392
+ C CG+ F +K+H +
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKL 25
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 48.5 bits (116), Expect = 1e-08
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 363 RIHTGEKPYQCDICGRGFAQSNDMKKHRRTVH 394
R HTGEKPY C C + F Q + H + H
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 44.7 bits (106), Expect = 2e-07
Identities = 20/36 (55%), Positives = 22/36 (61%)
Query: 209 RTHTGEKPYACYLCDKRFAQISDRIKHLKSSHNFDF 244
RTHTGEKPYAC CDK F Q H K H+ +F
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 42.4 bits (100), Expect = 2e-06
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 335 RLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
R H +PYAC+ CDKTF++K L H++ +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 39.7 bits (93), Expect = 1e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
H E+ + C+ C+K+F++K L +H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 24.6 bits (54), Expect = 2.8
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAH 151
Y C CD+T++ K+ L +H + +
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRY 31
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 48.0 bits (115), Expect = 1e-08
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 364 IHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
IH+GEKPY C CG+ F++S+ + +H+R
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRV 29
Score = 45.7 bits (109), Expect = 8e-08
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGE 368
+PY C +C K F + + L H R+HTGE
Sbjct: 6 KPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 43.8 bits (104), Expect = 4e-07
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 182 VHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
+H+ E+ + C C K+F R L H R HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 39.1 bits (92), Expect = 2e-05
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 211 HTGEKPYACYLCDKRFAQISDRIKHLK 237
H+GEKPY C C K F++ S ++H +
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQR 28
Score = 26.8 bits (60), Expect = 0.49
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLG 153
Y C +C + + L H+R H G
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTG 32
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 48.0 bits (115), Expect = 1e-08
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
R + C C + F ++ HL HYR HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 42.6 bits (101), Expect = 9e-07
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
R F C C ++F R+ HLK H R+HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 35.3 bits (82), Expect = 4e-04
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 369 KPYQCDICGRGFAQSNDMKKHRRT 392
+ + C++C R FA+ +K+H R+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRS 24
Score = 27.6 bits (62), Expect = 0.19
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 215 KPYACYLCDKRFAQISDRIKHLK 237
+ + C +C + FA+ +H +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR 23
Score = 25.3 bits (56), Expect = 1.4
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLG 153
+ C+ C R + ++ L H R+H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 48.5 bits (115), Expect = 1e-08
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
+ Y C QC K+F K+ H +H G +PY C +CG+ F + + H +
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52
Score = 40.4 bits (94), Expect = 1e-05
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
++ +PC C KSF K H H G +PY C +C K+F + H+K
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 38.5 bits (89), Expect = 5e-05
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 320 CDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIH 365
C +K Q +H +H LRPY C C K FK K+HL H +IH
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 32.3 bits (73), Expect = 0.008
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTH 211
H +H R + C C K FK K HL H + H
Sbjct: 21 HMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 28.9 bits (64), Expect = 0.12
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 368 EKPYQCDICGRGFAQSNDMKKHRRTVHKAQIH 399
+K Y C CG+ F + +H + +
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPY 31
Score = 23.9 bits (51), Expect = 9.3
Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 14/61 (22%)
Query: 280 FKCDLCGNILSSKHILQEHVRVVHMGLSRKYHYEYKPDGVCDVCGE---YKKQLLQHKRL 336
+ C CG + K H+ + C VCG+ K L+ H ++
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG----------CGVCGKKFKMKHHLVGHMKI 52
Query: 337 H 337
H
Sbjct: 53 H 53
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 47.4 bits (113), Expect = 2e-08
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
R TG KP+QC C R F++S+ + HR+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33
Score = 44.0 bits (104), Expect = 4e-07
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
TR TG KP+ C CD+ F++ H K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 38.9 bits (91), Expect = 2e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 333 HKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTG 367
R ++P+ C CD++F + +HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 35.5 bits (82), Expect = 4e-04
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 179 HNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTG 213
+ F C C++SF R HL +H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 24.3 bits (53), Expect = 4.1
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLGI 154
+ C CDR++ L +HR+ H+ +
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRHMLV 37
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 45.2 bits (107), Expect = 2e-07
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 361 HYRIHTGEKPYQCDICGRGFAQSNDMKKHRRT 392
+ Y+CD CG+ F+ S+D+ KHRRT
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRT 34
Score = 44.8 bits (106), Expect = 2e-07
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 332 QHKRLHFPLRPYACTQCDKTFKKKNHLTTHYRIHTGE 368
+ + R Y C +C K+F + L+ H R HTGE
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 40.5 bits (95), Expect = 6e-06
Identities = 14/38 (36%), Positives = 16/38 (42%)
Query: 177 AHHNEVHAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
R++ C C KSF L H RTHTGE
Sbjct: 1 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 37.8 bits (88), Expect = 5e-05
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 207 HTRTHTGEKPYACYLCDKRFAQISDRIKHLK 237
+ Y C C K F+ SD KH +
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 43.9 bits (104), Expect = 3e-07
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
+ +AC +C K F + +HL+ H + H +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 39.2 bits (92), Expect = 2e-05
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 189 FPCTFCEKSFKRKLHLKVHTRTHTGEK 215
F C C K F R HL H +TH +K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 34.2 bits (79), Expect = 0.001
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 369 KPYQCDICGRGFAQSNDMKKHRRT 392
K + C C + F +S+ + KH +T
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKT 24
Score = 27.7 bits (62), Expect = 0.22
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 215 KPYACYLCDKRFAQISDRIKHLK 237
K +AC C KRF + KH+K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIK 23
Score = 24.2 bits (53), Expect = 3.2
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLG 153
+ C +C + + L H + H
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQN 27
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 43.8 bits (104), Expect = 4e-07
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTG 367
+P+ C C + F + +HLTTH R HTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 38.7 bits (91), Expect = 2e-05
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTG 213
++ F C C ++F R HL H RTHTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 37.6 bits (88), Expect = 5e-05
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 368 EKPYQCDICGRGFAQSNDMKKHRRT 392
+KP+QC IC R F++S+ + H RT
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRT 25
Score = 30.7 bits (70), Expect = 0.016
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 214 EKPYACYLCDKRFAQISDRIKHLK 237
+KP+ C +C + F++ H++
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIR 24
Score = 26.0 bits (58), Expect = 0.78
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAHLG 153
+ C C R + L H R H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 43.5 bits (103), Expect = 5e-07
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 341 RPYACT--QCDKTFKKKNHLTTHYRIHTGEK 369
RP+ CT C K F + + L H R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 38.5 bits (90), Expect = 3e-05
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTGEK 215
R F CT+ C K F R L+ H RTHTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.1 bits (71), Expect = 0.013
Identities = 9/26 (34%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Query: 369 KPYQCDI--CGRGFAQSNDMKKHRRT 392
+P+ C CG+ F +S+++++H+RT
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRT 26
Score = 24.2 bits (53), Expect = 3.4
Identities = 7/25 (28%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 215 KPYACYL--CDKRFAQISDRIKHLK 237
+P+ C C KRF + + +H +
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKR 25
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 42.7 bits (101), Expect = 9e-07
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE 368
+P+ CT C K++ + +L TH R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 36.5 bits (85), Expect = 1e-04
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTGE 214
+ CTF C KS+ R +LK H R+HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 30.4 bits (69), Expect = 0.022
Identities = 7/26 (26%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 369 KPYQCDI--CGRGFAQSNDMKKHRRT 392
KP++C C + +++ ++K H R+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRS 26
Score = 24.2 bits (53), Expect = 3.9
Identities = 7/25 (28%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 215 KPYAC--YLCDKRFAQISDRIKHLK 237
KP+ C C K ++++ + HL+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLR 25
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 41.3 bits (97), Expect = 4e-06
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 365 HTGEKPYQCDICGRGFAQSNDMKKHRRT 392
+G++P+ C IC F + +H +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKV 29
Score = 38.6 bits (90), Expect = 3e-05
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGE 368
RP+ C C F K + H ++HT
Sbjct: 6 RPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 35.9 bits (83), Expect = 2e-04
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 183 HAHERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
+ +R F C C +F K + H + HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 33.6 bits (77), Expect = 0.002
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 211 HTGEKPYACYLCDKRFAQISDRIKHLK 237
+G++P+ C +C F ++ +HLK
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK 28
Score = 23.9 bits (52), Expect = 4.7
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAH 151
+ C C + TK + H + H
Sbjct: 8 FVCRICLSAFTTKANCARHLKVH 30
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 40.4 bits (95), Expect = 6e-06
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE 368
+P+ CT C K F +L TH RIHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 34.3 bits (79), Expect = 8e-04
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTGE 214
+ F CTF C K F +L+ H R HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 28.1 bits (63), Expect = 0.13
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 369 KPYQCDI--CGRGFAQSNDMKKHRRT 392
KP+QC CG+ F+ +++ H R
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRI 26
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 40.3 bits (95), Expect = 7e-06
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHT 366
+PY C +C K F + + L H RIHT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 31.8 bits (73), Expect = 0.007
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 369 KPYQCDICGRGFAQSNDMKKHRRT 392
KPY+C CG+ F+Q++ + H+R
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRI 24
Score = 30.6 bits (70), Expect = 0.016
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 189 FPCTFCEKSFKRKLHLKVHTRTHT 212
+ C C K+F + L H R HT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 25.6 bits (57), Expect = 0.92
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 215 KPYACYLCDKRFAQISDRIKH 235
KPY C C K F+Q S I H
Sbjct: 1 KPYKCLECGKAFSQNSGLINH 21
Score = 23.3 bits (51), Expect = 6.3
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 129 YPCDQCDRTYQTKKSLYVHRRAH 151
Y C +C + + L H+R H
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIH 25
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 40.0 bits (94), Expect = 9e-06
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTG 367
RPYAC CD+ F + LT H RIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 34.2 bits (79), Expect = 0.001
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTG 213
R + C C++ F R L H R HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 29.6 bits (67), Expect = 0.037
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 369 KPYQCDI--CGRGFAQSNDMKKHRRT 392
+PY C + C R F++S D+ +H R
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRI 26
Score = 23.8 bits (52), Expect = 4.1
Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Query: 215 KPYAC--YLCDKRFAQISDRIKHLK 237
+PYAC CD+RF++ +D +H++
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIR 25
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 38.1 bits (89), Expect = 4e-05
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE 368
RPY+C CDK F + + L H + H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 36.2 bits (84), Expect = 2e-04
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 186 ERKFPCTF--CEKSFKRKLHLKVHTRTHTGE 214
+R + C C+K+F R L H ++H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 32.7 bits (75), Expect = 0.004
Identities = 8/27 (29%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 368 EKPYQCDI--CGRGFAQSNDMKKHRRT 392
++PY CD C + F +++D+ +H+++
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKS 27
Score = 26.5 bits (59), Expect = 0.50
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 214 EKPYAC--YLCDKRFAQISDRIKHLK 237
++PY+C CDK F + D I+H K
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKK 26
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 40.2 bits (94), Expect = 6e-05
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 214 EKPYACYLCDKRFAQISDRIKHLKSSHNFDFESVKNK 250
+ C CD+ FA + H K H F+ +S+ +K
Sbjct: 13 RQHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHK 49
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 35.9 bits (82), Expect = 3e-04
Identities = 12/29 (41%), Positives = 23/29 (79%)
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
E+ F C+ C+++F+R++ L++H +HTGE
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 26.6 bits (58), Expect = 0.50
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 343 YACTQCDKTFKKKNHLTTHYRIHTGE 368
+ C+ C +TF+++ L H HTGE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 35.6 bits (82), Expect = 3e-04
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 368 EKPYQCDICGRGFAQSNDMKKHRRT 392
EKP+ CDICGR FA+S++ K+H +
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKI 25
Score = 28.6 bits (64), Expect = 0.099
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 214 EKPYACYLCDKRFAQISDRIKHLK 237
EKP+AC +C ++FA+ +R +H K
Sbjct: 1 EKPFACDICGRKFARSDERKRHTK 24
Score = 26.3 bits (58), Expect = 0.68
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTH 211
E+ F C C + F R K HT+ H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 25.6 bits (56), Expect = 1.2
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIH 365
+P+AC C + F + + H +IH
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 35.3 bits (81), Expect = 5e-04
Identities = 8/45 (17%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 327 KKQLLQHKRLHFPLRPYACTQCD--KTFKKKNHLTTHYRIHTGEK 369
+ + P + + C KTFK++ ++ +H + H ++
Sbjct: 3 PRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 34.1 bits (78), Expect = 0.002
Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 361 HYRIHTGEKPYQCDICGRG--FAQSNDMKKHRRT 392
Y +K ++C G F + +++ H +T
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT 42
Score = 30.7 bits (69), Expect = 0.023
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 183 HAHERKFPCTFCE--KSFKRKLHLKVHTRTHTGEK 215
++ F C F K+FKR+ +++ H +TH ++
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 28.4 bits (63), Expect = 0.20
Identities = 5/33 (15%), Positives = 11/33 (33%), Gaps = 2/33 (6%)
Query: 207 HTRTHTGEKPYACYLCD--KRFAQISDRIKHLK 237
+K + C K F + + H++
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQ 41
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 34.6 bits (80), Expect = 6e-04
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHT 366
RPY C C+K F + +L +H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 33.1 bits (76), Expect = 0.002
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHT 212
R + C F C K F + +LK H TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 30.8 bits (70), Expect = 0.017
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 369 KPYQCDI--CGRGFAQSNDMKKHRRT 392
+PY C C + FAQS ++K H T
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILT 26
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 35
Score = 32.3 bits (74), Expect = 0.005
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
Query: 300 RVVHMGLSRKYHYEYKP---DGVCDVCGE 325
R + YH + P GVCD CG
Sbjct: 2 RRICRNCGATYHLIFHPPAKPGVCDKCGG 30
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Bacillus globisporus
[TaxId: 1459]}
Length = 35
Score = 32.3 bits (74), Expect = 0.006
Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 3/29 (10%)
Query: 300 RVVHMGLSRKYHYEYKP---DGVCDVCGE 325
R + YH + P +G CD G
Sbjct: 2 RRICKVCGTSYHLLFNPPQVEGKCDKDGG 30
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 31.6 bits (71), Expect = 0.008
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 191 CTFCEKSFKRKLHLKVHTRTHTGEK 215
C C K F K +LKVH R HTGEK
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 28.5 bits (63), Expect = 0.11
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 345 CTQCDKTFKKKNHLTTHYRIHTGEK 369
C C K F K +L H R HTGEK
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 31.6 bits (71), Expect = 0.011
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEKPYA 218
++ C C K F+ HL H +H+GEKPY+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35
Score = 30.0 bits (67), Expect = 0.035
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGEKPY 371
+ AC C K F+ HL H H+GEKPY
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d1ak2a2 g.41.2.1 (A:147-176) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Cow (Bos taurus),
mitochondrial izozyme-2 [TaxId: 9913]}
Length = 30
Score = 31.1 bits (71), Expect = 0.014
Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 3/21 (14%)
Query: 308 RKYHYEYKP---DGVCDVCGE 325
R YH E+ P D+ GE
Sbjct: 5 RSYHEEFNPPKEPMKDDITGE 25
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 30.4 bits (68), Expect = 0.021
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 187 RKFPCTF--CEKSFKRKLHLKVHTRTHTGE 214
+ FPC CEK F HL H+ THTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 27.7 bits (61), Expect = 0.20
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 341 RPYACTQ--CDKTFKKKNHLTTHYRIHTGE 368
+P+ C + C+K F +HLT H HTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Escherichia coli [TaxId:
562]}
Length = 35
Score = 29.7 bits (67), Expect = 0.041
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 300 RVVHMGLSRKYHYEYKP---DGVCDVCGE 325
R VH R YH ++ P +G DV GE
Sbjct: 2 RRVHAPSGRVYHVKFNPPKVEGKDDVTGE 30
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 29.3 bits (65), Expect = 0.054
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 342 PYACTQCDKTFKKKNHLTTHYRIHTG 367
P+ C C K F +K+ L TH R HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 28.5 bits (63), Expect = 0.095
Identities = 13/23 (56%), Positives = 13/23 (56%)
Query: 191 CTFCEKSFKRKLHLKVHTRTHTG 213
C C K F RK LK H R HTG
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHTG 26
Score = 23.9 bits (51), Expect = 5.0
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 370 PYQCDICGRGFAQSNDMKKHRRT 392
P++C++CG+ F++ + +K H R
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRC 23
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 29.3 bits (65), Expect = 0.078
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 366 TGEKPYQCDICGRGFAQSNDMKKHRRTVHKA 396
TG KPY+C+IC + F + +H + K+
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTSCTKS 31
Score = 25.1 bits (54), Expect = 2.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 212 TGEKPYACYLCDKRF 226
TG KPY C +C KRF
Sbjct: 1 TGIKPYECNICAKRF 15
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 28.5 bits (63), Expect = 0.12
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTG 367
+PY+C C FK+K+ ++ H R H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 27.7 bits (61), Expect = 0.21
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTG 213
E+ + C C FKRK + H R+H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 26.9 bits (59), Expect = 0.47
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 368 EKPYQCDICGRGFAQSNDMKKHRRTVHKAQIH 399
EKPY C +CG F + + M H R+ H +
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVG 31
Score = 24.6 bits (53), Expect = 2.7
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 214 EKPYACYLCDKRFAQISDRIKHLKSSHN 241
EKPY+C +C RF + DR+ + SH+
Sbjct: 1 EKPYSCPVCGLRFKR-KDRMSYHVRSHD 27
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.4 bits (63), Expect = 0.12
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGE 368
R + C +C K F + + L H +HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 23.8 bits (51), Expect = 4.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
R C C K+F LK H HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Cow (Bos taurus),
mitochondrial izozyme-3 [TaxId: 9913]}
Length = 37
Score = 28.1 bits (63), Expect = 0.17
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 300 RVVHMGLSRKYHYEYKP---DGVCDVCGE 325
R +H G R Y+ E+ P G+ D+ GE
Sbjct: 2 RWIHPGSGRVYNIEFNPPKTMGIDDLTGE 30
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 27.9 bits (62), Expect = 0.21
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 370 PYQCDICGRGFAQSNDMKKHRRTVH 394
PY C +C R F + + + +H + +H
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIH 25
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 27.3 bits (60), Expect = 0.24
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 186 ERKFPCTFCEKSFKRKLHLKVHTRTHTGE 214
ER F C C + + L VH R+HTG+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 26.5 bits (58), Expect = 0.55
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 341 RPYACTQCDKTFKKKNHLTTHYRIHTGE 368
RP+ C C + + LT H R HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 27.4 bits (61), Expect = 0.25
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 191 CTFCEKSFKRKLHLKVHTRTHTGE 214
C+ + FK + L VH R HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
Score = 26.2 bits (58), Expect = 0.78
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 345 CTQCDKTFKKKNHLTTHYRIHTGE 368
C++ + FK + L H R HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 38
Score = 27.0 bits (60), Expect = 0.44
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 300 RVVHMGLSRKYHYEYKP---DGVCDVCGE 325
R++H R YH + P D DV GE
Sbjct: 2 RLIHPASGRSYHKIFNPPKEDMKDDVTGE 30
>d1dxga_ g.41.5.2 (A:) Desulforedoxin {Desulfovibrio gigas [TaxId:
879]}
Length = 36
Score = 26.7 bits (59), Expect = 0.51
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 10/31 (32%)
Query: 275 ERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
++KC+LCG + V+V+ G
Sbjct: 2 NEGDVYKCELCGQV----------VKVLEEG 22
>d1vzia2 g.41.5.2 (A:1-37) Desulfoferrodoxin N-terminal domain
{Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId:
887]}
Length = 37
Score = 26.6 bits (59), Expect = 0.51
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 10/31 (32%)
Query: 275 ERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
ER ++KC++CGNI V V++ G
Sbjct: 2 ERLQVYKCEVCGNI----------VEVLNGG 22
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 31
Score = 26.4 bits (58), Expect = 0.57
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 215 KPYACYL--CDKRFAQISDRIKHLKSSH 240
KPY C C K F+ SDR KH +H
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTH 28
Score = 23.3 bits (50), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 369 KPYQCDI--CGRGFAQSNDMKKHRRTVH 394
KPY C+ C + F+ ++D KH+ H
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTH 28
>d1dfxa2 g.41.5.2 (A:1-36) Desulfoferrodoxin N-terminal domain
{Desulfovibrio desulfuricans [TaxId: 876]}
Length = 36
Score = 26.6 bits (59), Expect = 0.60
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 10/31 (32%)
Query: 275 ERKLIFKCDLCGNILSSKHILQEHVRVVHMG 305
+ ++KC CGNI V V+H G
Sbjct: 2 KHLEVYKCTHCGNI----------VEVLHGG 22
>d1kfsa1 c.55.3.5 (A:324-518) Exonuclease domain of prokaryotic DNA
polymerase {Escherichia coli [TaxId: 562]}
Length = 195
Score = 29.2 bits (64), Expect = 0.62
Identities = 17/124 (13%), Positives = 36/124 (29%)
Query: 235 HLKSSHNFDFESVKNKTTPLTRYLNKHLHDAHPEAIKTERERKLIFKCDLCGNILSSKHI 294
+L + E PL + + + I + + + +I
Sbjct: 66 YLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYI 125
Query: 295 LQEHVRVVHMGLSRKYHYEYKPDGVCDVCGEYKKQLLQHKRLHFPLRPYACTQCDKTFKK 354
L M + ++K ++ G+ K QL ++ YA D T +
Sbjct: 126 LNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL 185
Query: 355 KNHL 358
+
Sbjct: 186 HLKM 189
>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz
{Human (Homo sapiens) [TaxId: 9606]}
Length = 33
Score = 25.4 bits (56), Expect = 1.6
Identities = 8/24 (33%), Positives = 9/24 (37%)
Query: 11 CEACHRTFSSPYEYGGHKLKCNLF 34
CE C + S H KC F
Sbjct: 10 CEFCLKYMKSRTILQQHMKKCGWF 33
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 25.3 bits (55), Expect = 2.6
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 189 FPCTFCEKSFKRKLHLKVHTRTH 211
PC C K F L+ H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 24.5 bits (53), Expect = 3.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 342 PYACTQCDKTFKKKNHLTTH 361
PY CT C+ +FK K +LT H
Sbjct: 1 PYHCTYCNFSFKTKGNLTKH 20
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 27.5 bits (61), Expect = 3.1
Identities = 7/36 (19%), Positives = 11/36 (30%), Gaps = 4/36 (11%)
Query: 3 PKETTSIK----CEACHRTFSSPYEYGGHKLKCNLF 34
P++ CE C + Y H +C
Sbjct: 22 PEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWR 57
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 24.7 bits (54), Expect = 3.2
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 10 KCEACHRTFSSPYEYGGHK 28
C C R F S GGH
Sbjct: 7 TCSFCKREFRSAQALGGHM 25
Score = 24.7 bits (54), Expect = 3.2
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 187 RKFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
R + C+FC++ F+ L H H ++
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 24.3 bits (53), Expect = 4.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 338 FPLRPYACTQCDKTFKKKNHLTTHYRIHTGEK 369
+P R Y C+ C + F+ L H +H ++
Sbjct: 1 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 23.9 bits (52), Expect = 5.2
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 369 KPYQCDICGRGF----AQSNDMKKHRRTVHKAQI 398
+ Y C C R F A M HRR + ++
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL 37
Score = 23.5 bits (51), Expect = 7.8
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 126 PLTYPCDQCDRTYQTKKSLYVHRRAH 151
P +Y C C R +++ ++L H H
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVH 28
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.4 bits (56), Expect = 3.3
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 367 GEKPYQCDICGRGFAQSNDMKKHRRT-VHKAQIHAVEDK 404
G ++C C R F S ++K H R+ HK ++ + +
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSVE 50
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 24.3 bits (52), Expect = 3.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 343 YACTQCDKTFKKKNHLTTHYRIH 365
Y C C+++F +K+ L+ H R+H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 23.2 bits (49), Expect = 9.0
Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 371 YQCDICGRGFAQSNDMKKHRRTVHK 395
Y+C +C R F + + + +H+R VHK
Sbjct: 1 YKCGLCERSFVEKSALSRHQR-VHK 24
>g1b35.1 b.121.4.1 (D:,C:) Insect picorna-like virus coat proteins
{Cricket paralysis virus [TaxId: 12136]}
Length = 339
Score = 27.3 bits (60), Expect = 3.7
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 16/74 (21%)
Query: 63 SADDLETLEISNTPTSAANVEN------KTLPLTYPCAKTKTRTSADDLETLEISNTPTS 116
+A +L+ LE +N+P++A + +P+ T IS
Sbjct: 1 AASELKQLETNNSPSTALGQISEGLTTLSHIPVLGNIFST----------PAWISAKAAD 50
Query: 117 AANVENKTLPLTYP 130
A + + P
Sbjct: 51 LAKLFGFSKPTVQG 64
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 24.3 bits (52), Expect = 3.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 343 YACTQCDKTFKKKNHLTTH 361
+ C++C KTF ++N + H
Sbjct: 5 FVCSKCGKTFTRRNTMARH 23
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 24.1 bits (52), Expect = 3.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 343 YACTQCDKTFKKKNHLTTHYRIHTGEK 369
Y C +C KK + L H R HT +
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 24.1 bits (52), Expect = 4.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 188 KFPCTFCEKSFKRKLHLKVHTRTHTGEK 215
K+ C C K+ LK H RTHT +
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTDVR 28
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 24.1 bits (52), Expect = 4.4
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 186 ERKFPCTF--CEKSFKRKLHLKVHTRTHT 212
++ F CT C + F + HL VH H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 26
Score = 24.0 bits (51), Expect = 4.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 370 PYQCDICGRGFAQSNDMKKHRRTVH 394
PY+C C + F Q D++ H +H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMIKLH 26
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 23.7 bits (51), Expect = 5.0
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 369 KPYQCDI--CGRGFAQSNDMKKHRRTVH 394
KPY C + C + + + ++KH +TVH
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH 28
Score = 23.3 bits (50), Expect = 7.7
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 215 KPYACYL--CDKRFAQISDRIKHLKSSH 240
KPY C L C KR+ S KH+K+ H
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH 28
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 26.7 bits (59), Expect = 5.3
Identities = 8/24 (33%), Positives = 9/24 (37%)
Query: 11 CEACHRTFSSPYEYGGHKLKCNLF 34
CE C + S H KC F
Sbjct: 34 CEFCLKYMKSRTILQQHMKKCGWF 57
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.6 bits (50), Expect = 5.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 369 KPYQCDICGRGFAQSNDMKKHRR 391
KPY+C C A S+ + KH R
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLR 24
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 23.5 bits (50), Expect = 6.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 189 FPCTFCEKSFKRKLHLKVHTR 209
+PC FC K F RK ++ H +
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVK 22
Score = 23.1 bits (49), Expect = 10.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 371 YQCDICGRGFAQSNDMKKHRRTVHK 395
Y C C + F + ++M H + +HK
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIHK 26
>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 37
Score = 23.8 bits (51), Expect = 6.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 210 THTGEKPYACYLCDKRFAQISDRIKHLKSSH 240
T GE Y C +C + + IS+ +H +SH
Sbjct: 2 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSH 32
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 23.9 bits (51), Expect = 7.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 368 EKPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
E+P C IC QS ++++H H A+
Sbjct: 22 EQPATCPICYAVIRQSRNLRRHLELRHFAK 51
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 25.9 bits (57), Expect = 8.4
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 11 CEACHRTFSSPYEYGGHKLKCNLF 34
+ + F S +Y ++ KC L
Sbjct: 37 DDFTLQYFGSKKQYERYRKKCTLR 60
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 23.2 bits (49), Expect = 9.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 369 KPYQCDICGRGFAQSNDMKKHRRTVHKAQ 397
K YQC C A S+++K H +T H +
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE 29
Score = 23.2 bits (49), Expect = 9.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 215 KPYACYLCDKRFAQISDRIKHLKSSHNFD 243
K Y C C+ R A S+ H+K+ H+ +
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE 29
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.132 0.406
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,440,231
Number of extensions: 66855
Number of successful extensions: 642
Number of sequences better than 10.0: 1
Number of HSP's gapped: 623
Number of HSP's successfully gapped: 224
Length of query: 405
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 318
Effective length of database: 1,213,086
Effective search space: 385761348
Effective search space used: 385761348
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.0 bits)