RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy3590
         (258 letters)



>d1whra_ d.68.7.1 (A:) R3H domain protein KIAA1002 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 124

 Score = 28.3 bits (63), Expect = 0.45
 Identities = 11/53 (20%), Positives = 21/53 (39%)

Query: 101 TRRDSSELEEKLKDAKMSNMRHRKILAERENELQALLSRLGSESLALPSSGPH 153
           T     +L E L +    N R R +L + E E+   ++   ++    P    +
Sbjct: 8   TDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFINDNNNQFKKFPQMTSY 60


>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
           [TaxId: 44689]}
          Length = 306

 Score = 25.6 bits (55), Expect = 7.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 131 NELQALLSRLGSESLALP 148
           N+LQ + + LGS+ L LP
Sbjct: 8   NKLQDVFNTLGSDPLDLP 25


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.134    0.406 

Gapped
Lambda     K      H
   0.267   0.0623    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 952,097
Number of extensions: 42286
Number of successful extensions: 111
Number of sequences better than 10.0: 1
Number of HSP's gapped: 108
Number of HSP's successfully gapped: 6
Length of query: 258
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 175
Effective length of database: 1,268,006
Effective search space: 221901050
Effective search space used: 221901050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.0 bits)