Your job contains 1 sequence.
>psy3598
MATSKDTNRSLLKSSVVALLAETHKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIE
HIFDEADDRFTLIVPKPEMLPYLCLIPKDQVFEEDEDNIQASPQKKKKPTPVKKKSKKKK
VEEDEEDGEEDEAEEEEGEGNEEPEDTSNMVPDSEAIDNPYLRPVKYPQRIKSVK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3598
(175 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0022724 - symbol:Taf8 "TBP-associated factor 8" sp... 205 5.6e-21 2
UNIPROTKB|F1NMN6 - symbol:TAF8 "Transcription initiation ... 155 2.0e-16 2
UNIPROTKB|Q5ZMS1 - symbol:TAF8 "Transcription initiation ... 155 2.0e-16 2
ZFIN|ZDB-GENE-040426-1013 - symbol:taf8 "TAF8 RNA polymer... 159 4.4e-16 2
RGD|1308423 - symbol:Taf8 "TAF8 RNA polymerase II, TATA b... 156 7.8e-16 2
MGI|MGI:1926879 - symbol:Taf8 "TAF8 RNA polymerase II, TA... 155 1.0e-15 2
UNIPROTKB|A7MAZ4 - symbol:TAF8 "Transcription initiation ... 156 1.0e-15 2
UNIPROTKB|E2RN76 - symbol:TAF8 "Uncharacterized protein" ... 156 1.0e-15 2
UNIPROTKB|Q7Z7C8 - symbol:TAF8 "Transcription initiation ... 156 1.0e-15 2
>FB|FBgn0022724 [details] [associations]
symbol:Taf8 "TBP-associated factor 8" species:7227
"Drosophila melanogaster" [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IDA] [GO:0009987
"cellular process" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] EMBL:AE014298
GO:GO:0045944 GO:GO:0006367 GO:GO:0005669 InterPro:IPR006565
Pfam:PF07524 SMART:SM00576 CTD:129685 eggNOG:NOG257256
GeneTree:ENSGT00390000017567 KO:K14649 OMA:TENLALH
InterPro:IPR019473 Pfam:PF10406 EMBL:Y15513 EMBL:AY071604
RefSeq:NP_523397.1 ProteinModelPortal:Q9VWY6 SMR:Q9VWY6
IntAct:Q9VWY6 MINT:MINT-863143 STRING:Q9VWY6 PaxDb:Q9VWY6
PRIDE:Q9VWY6 EnsemblMetazoa:FBtr0074514 GeneID:32792
KEGG:dme:Dmel_CG7128 FlyBase:FBgn0022724 InParanoid:Q9VWY6
OrthoDB:EOG4DZ0B5 PhylomeDB:Q9VWY6 GenomeRNAi:32792 NextBio:780406
Bgee:Q9VWY6 GermOnline:CG7128 Uniprot:Q9VWY6
Length = 328
Score = 205 (77.2 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 42/75 (56%), Positives = 51/75 (68%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
THKQPVTEYEAIREKAA QKRD+ +AL KF+ KT ++F D+ F LI KP PY
Sbjct: 146 THKQPVTEYEAIREKAACQKRDIEKALTKFLCKTTETNNLFPTEDNMFPLIACKPAFPPY 205
Query: 83 LCLI-PKDQVFEEDE 96
+ P DQVF+ +E
Sbjct: 206 AAALNPTDQVFDFEE 220
Score = 59 (25.8 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 146 DTSNMVPDSEAIDNPYLRPVKYPQRIKS 173
+T+ + ++ IDNPYLR P+R K+
Sbjct: 269 NTNKAILENPNIDNPYLRAATLPKRSKN 296
>UNIPROTKB|F1NMN6 [details] [associations]
symbol:TAF8 "Transcription initiation factor TFIID subunit
8" species:9031 "Gallus gallus" [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0005669 "transcription factor
TFIID complex" evidence=IEA] [GO:0045598 "regulation of fat cell
differentiation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0051457
"maintenance of protein location in nucleus" evidence=IEA]
GO:GO:0048471 GO:GO:0045893 GO:GO:0045598 GO:GO:0051457
GO:GO:0005669 InterPro:IPR006565 Pfam:PF07524
GeneTree:ENSGT00390000017567 InterPro:IPR019473 Pfam:PF10406
IPI:IPI00579339 EMBL:AADN02066913 EMBL:AADN02066914
Ensembl:ENSGALT00000005533 OMA:AIREKSA ArrayExpress:F1NMN6
Uniprot:F1NMN6
Length = 239
Score = 155 (59.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
T+++PV++Y+ +REKAA+Q+RD+ RAL +F+ KT + +F + F LI +P +PY
Sbjct: 96 TYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTVPY 155
Query: 83 L-CLIPKDQVFEEDED 97
L L+P + ++ E+
Sbjct: 156 LTALLPSELEMQQMEE 171
Score = 62 (26.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 153 DSEAIDNPYLRPVKYPQ 169
+ IDNPYLRPVK P+
Sbjct: 218 EENMIDNPYLRPVKKPK 234
>UNIPROTKB|Q5ZMS1 [details] [associations]
symbol:TAF8 "Transcription initiation factor TFIID subunit
8" species:9031 "Gallus gallus" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0051457 "maintenance of protein
location in nucleus" evidence=IEA] GO:GO:0007275 GO:GO:0048471
GO:GO:0045893 GO:GO:0030154 GO:GO:0006351 GO:GO:0045598
GO:GO:0051457 GO:GO:0005669 InterPro:IPR006565 Pfam:PF07524
CTD:129685 eggNOG:NOG257256 HOGENOM:HOG000007034 HOVERGEN:HBG105411
KO:K14649 OrthoDB:EOG4V6ZH6 InterPro:IPR019473 Pfam:PF10406
EMBL:AJ719313 IPI:IPI00579339 RefSeq:NP_001026094.1
UniGene:Gga.22333 STRING:Q5ZMS1 GeneID:419929 KEGG:gga:419929
InParanoid:Q5ZMS1 NextBio:20822916 ArrayExpress:Q5ZMS1
Uniprot:Q5ZMS1
Length = 244
Score = 155 (59.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
T+++PV++Y+ +REKAA+Q+RD+ RAL +F+ KT + +F + F LI +P +PY
Sbjct: 101 TYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTVPY 160
Query: 83 L-CLIPKDQVFEEDED 97
L L+P + ++ E+
Sbjct: 161 LTALLPSELEMQQMEE 176
Score = 62 (26.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 153 DSEAIDNPYLRPVKYPQ 169
+ IDNPYLRPVK P+
Sbjct: 223 EENMIDNPYLRPVKKPK 239
>ZFIN|ZDB-GENE-040426-1013 [details] [associations]
symbol:taf8 "TAF8 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009072 ZFIN:ZDB-GENE-040426-1013 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006355
GO:GO:0006351 Gene3D:1.10.20.10 InterPro:IPR006565 Pfam:PF07524
SMART:SM00576 CTD:129685 eggNOG:NOG257256
GeneTree:ENSGT00390000017567 HOGENOM:HOG000007034
HOVERGEN:HBG105411 KO:K14649 OrthoDB:EOG4V6ZH6 InterPro:IPR019473
Pfam:PF10406 EMBL:BC049422 EMBL:BC065457 IPI:IPI00481674
IPI:IPI00882794 RefSeq:NP_956580.1 UniGene:Dr.159222 STRING:Q6P0T2
PRIDE:Q6P0T2 Ensembl:ENSDART00000039498 GeneID:393256
KEGG:dre:393256 InParanoid:Q6P0T2 NextBio:20814317 Bgee:Q6P0T2
Uniprot:Q6P0T2
Length = 308
Score = 159 (61.0 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
T ++PV++Y+ +REKAA+Q+RD+ RAL +F+ KT + +F + F LI KP +PY
Sbjct: 166 TFREPVSDYQVVREKAASQRRDVERALTRFMAKTGETQSLFKDDISAFPLIAAKPSPIPY 225
Query: 83 L-CLIPKD---QVFEEDEDNIQ 100
L L+P + Q EE + + Q
Sbjct: 226 LSALLPSELELQSLEETDSSEQ 247
Score = 63 (27.2 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 148 SNMVPDSEAIDNPYLRPVKYPQ 169
S + IDNPYLRPVK P+
Sbjct: 282 SGKANEENMIDNPYLRPVKKPK 303
>RGD|1308423 [details] [associations]
symbol:Taf8 "TAF8 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA;ISO] [GO:0045598 "regulation of
fat cell differentiation" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA;ISO]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR009072 RGD:1308423 GO:GO:0048471 GO:GO:0045893
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0045598 GO:GO:0051457
GO:GO:0001833 EMBL:CH473987 GO:GO:0005669 InterPro:IPR006565
Pfam:PF07524 SMART:SM00576 CTD:129685 GeneTree:ENSGT00390000017567
KO:K14649 OMA:TENLALH OrthoDB:EOG4V6ZH6 InterPro:IPR019473
Pfam:PF10406 IPI:IPI00371755 RefSeq:NP_001101667.1 UniGene:Rn.35557
Ensembl:ENSRNOT00000020499 GeneID:316216 KEGG:rno:316216
UCSC:RGD:1308423 NextBio:670552 Uniprot:D3ZY89
Length = 308
Score = 156 (60.0 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
T+++PV++Y+ +REKAA+Q+RD+ RAL +F+ KT + +F + F LI +P +PY
Sbjct: 162 TYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPY 221
Query: 83 L-CLIPKDQVFEEDED 97
L L+P + ++ E+
Sbjct: 222 LTALLPSELEIQQMEE 237
Score = 64 (27.6 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 153 DSEAIDNPYLRPVKYPQ--RIKSV 174
+ IDNPYLRPVK P+ R KS+
Sbjct: 284 EESTIDNPYLRPVKKPKIRRKKSL 307
>MGI|MGI:1926879 [details] [associations]
symbol:Taf8 "TAF8 RNA polymerase II, TATA box binding
protein (TBP)-associated factorq" species:10090 "Mus musculus"
[GO:0001833 "inner cell mass cell proliferation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005669 "transcription
factor TFIID complex" evidence=ISA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
evidence=ISA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051457 "maintenance of
protein location in nucleus" evidence=ISO] InterPro:IPR009072
MGI:MGI:1926879 GO:GO:0048471 GO:GO:0045893 GO:GO:0030154
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0045598
GO:GO:0051457 GO:GO:0001833 GO:GO:0005669 InterPro:IPR006565
Pfam:PF07524 SMART:SM00576 CTD:129685 eggNOG:NOG257256
GeneTree:ENSGT00390000017567 HOGENOM:HOG000007034
HOVERGEN:HBG105411 KO:K14649 OMA:TENLALH OrthoDB:EOG4V6ZH6
InterPro:IPR019473 Pfam:PF10406 EMBL:AF222802 EMBL:AK045108
EMBL:AK049949 EMBL:AK076486 EMBL:AK086656 EMBL:AK162110
EMBL:BC057895 IPI:IPI00459354 IPI:IPI00880809 IPI:IPI00881010
IPI:IPI00881023 IPI:IPI00881150 RefSeq:NP_071298.1
UniGene:Mm.275901 ProteinModelPortal:Q9EQH4 SMR:Q9EQH4
STRING:Q9EQH4 PhosphoSite:Q9EQH4 PRIDE:Q9EQH4 DNASU:63856
Ensembl:ENSMUST00000067103 GeneID:63856 KEGG:mmu:63856
UCSC:uc008cvh.1 UCSC:uc008cvi.1 UCSC:uc008cvj.1 InParanoid:Q9EQH4
NextBio:319779 Bgee:Q9EQH4 Genevestigator:Q9EQH4 Uniprot:Q9EQH4
Length = 308
Score = 155 (59.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
T+++PV++Y+ +REKAA+Q+RD+ RAL +F+ KT + +F + F LI +P +PY
Sbjct: 162 TYREPVSDYQILREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPY 221
Query: 83 L-CLIPKDQVFEEDED 97
L L+P + ++ E+
Sbjct: 222 LTALLPSELEIQQMEE 237
Score = 64 (27.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 153 DSEAIDNPYLRPVKYPQ--RIKSV 174
+ IDNPYLRPVK P+ R KS+
Sbjct: 284 EESVIDNPYLRPVKKPKIRRKKSL 307
>UNIPROTKB|A7MAZ4 [details] [associations]
symbol:TAF8 "Transcription initiation factor TFIID subunit
8" species:9913 "Bos taurus" [GO:0051457 "maintenance of protein
location in nucleus" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045598 "regulation
of fat cell differentiation" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR009072
GO:GO:0048471 GO:GO:0045893 GO:GO:0030154 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0045598 GO:GO:0051457
GO:GO:0001833 GO:GO:0005669 InterPro:IPR006565 Pfam:PF07524
SMART:SM00576 EMBL:BC151255 IPI:IPI00706402 RefSeq:NP_001094670.1
UniGene:Bt.102140 STRING:A7MAZ4 PRIDE:A7MAZ4
Ensembl:ENSBTAT00000036067 GeneID:539938 KEGG:bta:539938 CTD:129685
eggNOG:NOG257256 GeneTree:ENSGT00390000017567 HOGENOM:HOG000007034
HOVERGEN:HBG105411 InParanoid:A7MAZ4 KO:K14649 OMA:TENLALH
OrthoDB:EOG4V6ZH6 NextBio:20878312 InterPro:IPR019473 Pfam:PF10406
Uniprot:A7MAZ4
Length = 310
Score = 156 (60.0 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
T+++PV++Y+ +REKAA+Q+RD+ RAL +F+ KT + +F + F LI +P +PY
Sbjct: 164 TYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPY 223
Query: 83 L-CLIPKDQVFEEDED 97
L L+P + ++ E+
Sbjct: 224 LTALLPSELEMQQMEE 239
Score = 63 (27.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 153 DSEAIDNPYLRPVKYPQ--RIKSV 174
+ IDNPYLRPVK P+ R KS+
Sbjct: 286 EESIIDNPYLRPVKKPKIRRKKSL 309
>UNIPROTKB|E2RN76 [details] [associations]
symbol:TAF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR009072 Gene3D:1.10.20.10 SUPFAM:SSF47113
InterPro:IPR006565 Pfam:PF07524 SMART:SM00576
GeneTree:ENSGT00390000017567 OMA:TENLALH InterPro:IPR019473
Pfam:PF10406 EMBL:AAEX03008324 Ensembl:ENSCAFT00000002559
Uniprot:E2RN76
Length = 310
Score = 156 (60.0 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
T+++PV++Y+ +REKAA+Q+RD+ RAL +F+ KT + +F + F LI +P +PY
Sbjct: 164 TYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPY 223
Query: 83 L-CLIPKDQVFEEDED 97
L L+P + ++ E+
Sbjct: 224 LTALLPSELEMQQMEE 239
Score = 63 (27.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 153 DSEAIDNPYLRPVKYPQ--RIKSV 174
+ IDNPYLRPVK P+ R KS+
Sbjct: 286 EETVIDNPYLRPVKKPKIRRKKSL 309
>UNIPROTKB|Q7Z7C8 [details] [associations]
symbol:TAF8 "Transcription initiation factor TFIID subunit
8" species:9606 "Homo sapiens" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA] [GO:0005669 "transcription factor
TFIID complex" evidence=IDA] [GO:0045598 "regulation of fat cell
differentiation" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR009072 GO:GO:0048471 GO:GO:0045893 GO:GO:0030154
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0045598
GO:GO:0051457 GO:GO:0001833 EMBL:AL513008 GO:GO:0005669
InterPro:IPR006565 Pfam:PF07524 SMART:SM00576 CTD:129685
eggNOG:NOG257256 HOGENOM:HOG000007034 HOVERGEN:HBG105411 KO:K14649
OMA:TENLALH OrthoDB:EOG4V6ZH6 InterPro:IPR019473 Pfam:PF10406
EMBL:AF465841 EMBL:AK057383 EMBL:AL512274 EMBL:BC119678
EMBL:BC119679 IPI:IPI00065313 IPI:IPI00878968 IPI:IPI00879798
RefSeq:NP_612639.2 UniGene:Hs.520122 ProteinModelPortal:Q7Z7C8
SMR:Q7Z7C8 IntAct:Q7Z7C8 STRING:Q7Z7C8 PhosphoSite:Q7Z7C8
DMDM:74723384 PaxDb:Q7Z7C8 PRIDE:Q7Z7C8 Ensembl:ENST00000372977
Ensembl:ENST00000372978 Ensembl:ENST00000372982
Ensembl:ENST00000456846 Ensembl:ENST00000494547 GeneID:129685
KEGG:hsa:129685 UCSC:uc003orr.3 UCSC:uc003ort.3 UCSC:uc003orv.1
GeneCards:GC06P042018 HGNC:HGNC:17300 HPA:HPA031734 MIM:609514
neXtProt:NX_Q7Z7C8 PharmGKB:PA162405144 ChiTaRS:TAF8
GenomeRNAi:129685 NextBio:82629 ArrayExpress:Q7Z7C8 Bgee:Q7Z7C8
CleanEx:HS_TAF8 Genevestigator:Q7Z7C8 Uniprot:Q7Z7C8
Length = 310
Score = 156 (60.0 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 23 THKQPVTEYEAIREKAATQKRDLARALNKFIIKTEPIEHIFDEADDRFTLIVPKPEMLPY 82
T+++PV++Y+ +REKAA+Q+RD+ RAL +F+ KT + +F + F LI +P +PY
Sbjct: 164 TYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPY 223
Query: 83 L-CLIPKDQVFEEDED 97
L L+P + ++ E+
Sbjct: 224 LTALLPSELEMQQMEE 239
Score = 63 (27.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 153 DSEAIDNPYLRPVKYPQ--RIKSV 174
+ IDNPYLRPVK P+ R KS+
Sbjct: 286 EENIIDNPYLRPVKKPKIRRKKSL 309
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 175 122 0.00091 102 3 11 23 0.41 31
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 511 (54 KB)
Total size of DFA: 112 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.55u 0.07s 11.62t Elapsed: 00:00:06
Total cpu time: 11.55u 0.07s 11.62t Elapsed: 00:00:06
Start: Thu Aug 15 10:57:04 2013 End: Thu Aug 15 10:57:10 2013