Query psy3599
Match_columns 223
No_of_seqs 204 out of 2437
Neff 10.3
Searched_HMMs 29240
Date Fri Aug 16 20:43:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3599.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3599hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.9 9.3E-23 3.2E-27 160.6 20.5 148 52-222 6-174 (304)
2 4gqb_B Methylosome protein 50; 99.9 2.8E-22 9.6E-27 160.8 18.4 146 57-222 125-291 (344)
3 3ow8_A WD repeat-containing pr 99.9 1E-21 3.5E-26 156.0 19.8 140 57-219 162-320 (321)
4 4ery_A WD repeat-containing pr 99.9 2.4E-21 8.3E-26 152.5 21.4 147 53-222 17-182 (312)
5 1vyh_C Platelet-activating fac 99.9 9.8E-22 3.3E-26 161.0 18.7 146 54-222 103-267 (410)
6 2ynn_A Coatomer subunit beta'; 99.9 4.3E-21 1.5E-25 151.0 20.2 148 55-222 93-261 (304)
7 3ow8_A WD repeat-containing pr 99.9 1.3E-21 4.3E-26 155.4 17.2 142 58-222 121-281 (321)
8 4gqb_B Methylosome protein 50; 99.9 4.4E-21 1.5E-25 153.8 20.1 145 58-223 29-204 (344)
9 1got_B GT-beta; complex (GTP-b 99.9 3.8E-21 1.3E-25 153.6 19.1 141 56-217 181-340 (340)
10 4h5i_A Guanine nucleotide-exch 99.9 3.6E-21 1.2E-25 155.5 18.3 144 57-220 174-343 (365)
11 2w18_A PALB2, fancn, partner a 99.9 3E-21 1E-25 152.6 16.7 149 57-219 154-356 (356)
12 1vyh_C Platelet-activating fac 99.9 1.9E-20 6.6E-25 153.3 20.2 144 56-222 147-329 (410)
13 1got_B GT-beta; complex (GTP-b 99.9 3.5E-20 1.2E-24 148.0 20.8 147 53-222 49-217 (340)
14 3frx_A Guanine nucleotide-bind 99.9 2.8E-20 9.5E-25 147.4 19.8 149 55-222 61-229 (319)
15 3fm0_A Protein CIAO1; WDR39,SG 99.9 2E-20 6.8E-25 149.8 19.1 141 57-219 59-224 (345)
16 2pbi_B Guanine nucleotide-bind 99.9 2.3E-20 7.7E-25 150.1 19.0 143 58-221 105-272 (354)
17 2hes_X YDR267CP; beta-propelle 99.9 3.4E-20 1.1E-24 147.6 19.0 143 58-220 57-230 (330)
18 3fm0_A Protein CIAO1; WDR39,SG 99.9 3E-20 1E-24 148.8 18.5 146 57-221 13-182 (345)
19 1nr0_A Actin interacting prote 99.9 3.9E-20 1.3E-24 158.7 20.0 144 56-222 100-272 (611)
20 4g56_B MGC81050 protein; prote 99.9 2.3E-20 8E-25 150.2 17.5 146 57-222 137-303 (357)
21 4g56_B MGC81050 protein; prote 99.9 4.3E-20 1.5E-24 148.6 18.8 145 57-223 40-216 (357)
22 3frx_A Guanine nucleotide-bind 99.9 1.4E-19 4.9E-24 143.3 20.5 144 54-221 12-186 (319)
23 2pm7_B Protein transport prote 99.8 1.9E-19 6.5E-24 141.1 19.2 148 57-222 7-191 (297)
24 1erj_A Transcriptional repress 99.8 2.6E-19 8.9E-24 145.7 20.6 139 60-221 124-288 (393)
25 3iz6_a 40S ribosomal protein R 99.8 9.4E-20 3.2E-24 147.7 17.7 159 53-222 60-282 (380)
26 2xzm_R RACK1; ribosome, transl 99.8 3E-19 1E-23 142.7 20.1 149 55-220 72-244 (343)
27 2ymu_A WD-40 repeat protein; u 99.8 1.2E-19 4E-24 153.9 18.7 137 56-217 423-577 (577)
28 2pbi_B Guanine nucleotide-bind 99.8 2.4E-19 8.1E-24 144.1 19.5 141 56-217 193-354 (354)
29 3iz6_a 40S ribosomal protein R 99.8 1.8E-19 6.1E-24 146.1 18.5 146 57-222 203-377 (380)
30 2pm7_B Protein transport prote 99.8 2.8E-19 9.4E-24 140.2 19.0 150 55-221 49-239 (297)
31 1nr0_A Actin interacting prote 99.8 2.4E-19 8.3E-24 153.8 20.1 147 55-222 143-357 (611)
32 2hes_X YDR267CP; beta-propelle 99.8 2.4E-19 8.1E-24 142.7 18.5 121 83-221 57-185 (330)
33 1erj_A Transcriptional repress 99.8 4.3E-19 1.5E-23 144.4 19.0 144 56-222 61-240 (393)
34 3f3f_A Nucleoporin SEH1; struc 99.8 5.3E-19 1.8E-23 139.6 18.7 144 55-221 7-250 (351)
35 4ery_A WD repeat-containing pr 99.8 2.6E-19 8.8E-24 140.9 16.7 122 78-222 18-140 (312)
36 3dm0_A Maltose-binding peripla 99.8 4.7E-19 1.6E-23 154.0 18.9 149 55-222 426-594 (694)
37 2xzm_R RACK1; ribosome, transl 99.8 5.2E-19 1.8E-23 141.3 17.7 121 78-219 16-148 (343)
38 4e54_B DNA damage-binding prot 99.8 5E-19 1.7E-23 145.8 17.3 145 57-222 117-284 (435)
39 3dwl_C Actin-related protein 2 99.8 3.4E-19 1.2E-23 143.4 15.5 149 54-222 50-238 (377)
40 2aq5_A Coronin-1A; WD40 repeat 99.8 5.6E-19 1.9E-23 143.8 15.9 143 57-222 54-209 (402)
41 4aow_A Guanine nucleotide-bind 99.8 1.9E-18 6.6E-23 136.7 18.4 119 79-222 211-339 (340)
42 3ei3_B DNA damage-binding prot 99.8 3.7E-18 1.3E-22 137.8 20.2 146 54-221 68-237 (383)
43 4gga_A P55CDC, cell division c 99.8 5.2E-18 1.8E-22 139.1 20.7 144 57-222 228-397 (420)
44 3k26_A Polycomb protein EED; W 99.8 4.7E-18 1.6E-22 135.6 19.8 117 84-221 69-193 (366)
45 3dwl_C Actin-related protein 2 99.8 3E-19 1E-23 143.8 12.6 119 78-219 50-176 (377)
46 2ymu_A WD-40 repeat protein; u 99.8 3.7E-18 1.3E-22 144.7 19.9 138 57-219 383-538 (577)
47 3jrp_A Fusion protein of prote 99.8 4.3E-18 1.5E-22 136.4 19.1 145 55-222 7-193 (379)
48 3mkq_A Coatomer beta'-subunit; 99.8 2.6E-18 9E-23 151.1 19.0 147 53-222 7-174 (814)
49 1gxr_A ESG1, transducin-like e 99.8 5.7E-18 1.9E-22 133.6 19.1 145 56-222 48-216 (337)
50 3bg1_A Protein SEC13 homolog; 99.8 6.2E-19 2.1E-23 139.4 13.2 123 79-221 9-137 (316)
51 3sfz_A APAF-1, apoptotic pepti 99.8 6.4E-18 2.2E-22 155.0 21.5 146 55-221 611-775 (1249)
52 3vl1_A 26S proteasome regulato 99.8 1.1E-17 3.7E-22 136.4 20.6 147 56-222 136-324 (420)
53 3lrv_A PRE-mRNA-splicing facto 99.8 4.2E-18 1.4E-22 136.0 17.6 117 84-222 125-246 (343)
54 3bg1_A Protein SEC13 homolog; 99.8 4.6E-19 1.6E-23 140.2 11.9 149 56-220 10-198 (316)
55 1sq9_A Antiviral protein SKI8; 99.8 5E-18 1.7E-22 137.3 17.9 117 84-222 233-397 (397)
56 4h5i_A Guanine nucleotide-exch 99.8 6.8E-18 2.3E-22 136.2 18.3 147 58-222 132-302 (365)
57 2j04_B YDR362CP, TAU91; beta p 99.8 1E-18 3.5E-23 147.3 13.9 145 56-220 263-428 (524)
58 3dm0_A Maltose-binding peripla 99.8 8.5E-18 2.9E-22 146.1 19.7 145 55-222 378-552 (694)
59 3f3f_A Nucleoporin SEH1; struc 99.8 6.3E-18 2.1E-22 133.4 17.3 124 79-222 7-145 (351)
60 4aow_A Guanine nucleotide-bind 99.8 1.8E-17 6.2E-22 131.1 19.5 149 55-222 82-248 (340)
61 4e54_B DNA damage-binding prot 99.8 2.2E-18 7.5E-23 142.0 14.6 145 56-222 161-329 (435)
62 4ggc_A P55CDC, cell division c 99.8 2.3E-17 7.8E-22 129.4 19.8 145 57-223 148-318 (318)
63 2aq5_A Coronin-1A; WD40 repeat 99.8 8.6E-18 2.9E-22 136.8 17.8 146 56-222 78-256 (402)
64 3mmy_A MRNA export factor; mRN 99.8 1.8E-17 6E-22 132.2 19.2 99 56-175 36-160 (368)
65 3gre_A Serine/threonine-protei 99.8 1.4E-17 4.8E-22 136.7 18.9 148 56-222 60-247 (437)
66 1k8k_C P40, ARP2/3 complex 41 99.8 1.1E-17 3.7E-22 134.0 17.6 145 57-222 50-235 (372)
67 3mmy_A MRNA export factor; mRN 99.8 1.1E-17 3.7E-22 133.4 16.7 122 78-222 34-162 (368)
68 3dw8_B Serine/threonine-protei 99.8 1.5E-17 5E-22 136.6 17.7 118 85-222 94-260 (447)
69 1r5m_A SIR4-interacting protei 99.8 3E-17 1E-21 133.3 19.2 139 57-219 245-424 (425)
70 1k8k_C P40, ARP2/3 complex 41 99.8 3.1E-17 1.1E-21 131.3 18.6 121 78-219 47-172 (372)
71 1gxr_A ESG1, transducin-like e 99.8 8E-17 2.7E-21 127.0 20.6 141 57-222 139-298 (337)
72 2j04_B YDR362CP, TAU91; beta p 99.8 1.4E-17 4.7E-22 140.5 17.0 120 84-222 266-388 (524)
73 3ei3_B DNA damage-binding prot 99.8 4.9E-17 1.7E-21 131.3 19.3 145 57-222 116-284 (383)
74 3vl1_A 26S proteasome regulato 99.8 2E-17 7E-22 134.8 17.0 107 101-222 107-214 (420)
75 2vdu_B TRNA (guanine-N(7)-)-me 99.8 3.8E-17 1.3E-21 135.1 18.7 144 57-222 100-273 (450)
76 3vu4_A KMHSV2; beta-propeller 99.8 6.2E-17 2.1E-21 130.0 19.4 76 135-221 193-272 (355)
77 3jrp_A Fusion protein of prote 99.8 1.8E-17 6.1E-22 132.8 16.0 123 78-221 6-135 (379)
78 3lrv_A PRE-mRNA-splicing facto 99.8 3.8E-17 1.3E-21 130.4 16.7 144 57-221 123-293 (343)
79 4a11_B DNA excision repair pro 99.8 1.3E-16 4.6E-21 128.9 20.0 148 54-222 38-220 (408)
80 3odt_A Protein DOA1; ubiquitin 99.8 6.8E-17 2.3E-21 126.3 17.6 115 83-222 183-298 (313)
81 2j04_A TAU60, YPL007P, hypothe 99.8 1.4E-17 4.7E-22 139.6 14.3 142 56-222 49-213 (588)
82 3zwl_B Eukaryotic translation 99.8 1.6E-16 5.4E-21 126.7 19.7 147 53-220 26-206 (369)
83 4aez_A CDC20, WD repeat-contai 99.8 1.2E-16 4E-21 130.2 19.1 141 58-222 133-295 (401)
84 3i2n_A WD repeat-containing pr 99.7 5E-17 1.7E-21 129.3 15.9 122 84-222 209-355 (357)
85 2oaj_A Protein SNI1; WD40 repe 99.7 3.1E-17 1.1E-21 146.5 16.1 142 56-222 14-184 (902)
86 4aez_A CDC20, WD repeat-contai 99.7 1.2E-16 4.2E-21 130.0 18.3 143 56-222 214-382 (401)
87 3jro_A Fusion protein of prote 99.7 5.2E-17 1.8E-21 142.6 17.2 144 57-221 7-190 (753)
88 3gre_A Serine/threonine-protei 99.7 6.4E-17 2.2E-21 132.8 16.7 146 57-222 109-294 (437)
89 3zwl_B Eukaryotic translation 99.7 9.1E-17 3.1E-21 128.1 17.1 128 70-221 19-152 (369)
90 3k26_A Polycomb protein EED; W 99.7 5.7E-17 2E-21 129.2 15.8 122 78-222 110-262 (366)
91 3v7d_B Cell division control p 99.7 1.5E-16 5.2E-21 131.5 18.8 145 57-222 160-343 (464)
92 1r5m_A SIR4-interacting protei 99.7 1.2E-16 4.1E-21 129.7 17.8 144 58-222 107-280 (425)
93 3dw8_B Serine/threonine-protei 99.7 1.8E-16 6.1E-21 130.1 18.3 114 84-220 177-315 (447)
94 1sq9_A Antiviral protein SKI8; 99.7 1.5E-16 5.2E-21 128.6 17.6 116 84-222 186-324 (397)
95 1pgu_A Actin interacting prote 99.7 3.4E-16 1.2E-20 133.2 20.0 142 57-222 114-285 (615)
96 3mkq_A Coatomer beta'-subunit; 99.7 9.4E-17 3.2E-21 141.2 17.0 121 78-221 8-129 (814)
97 2j04_A TAU60, YPL007P, hypothe 99.7 1.1E-16 3.6E-21 134.3 15.7 139 57-222 83-256 (588)
98 3jro_A Fusion protein of prote 99.7 2E-16 6.8E-21 138.9 18.1 153 56-221 50-239 (753)
99 2pm9_A Protein WEB1, protein t 99.7 1.8E-16 6E-21 128.9 16.5 145 56-222 110-296 (416)
100 2pm9_A Protein WEB1, protein t 99.7 6.9E-17 2.3E-21 131.3 14.0 148 57-222 163-339 (416)
101 2xyi_A Probable histone-bindin 99.7 2.4E-16 8.3E-21 129.6 17.2 117 84-220 231-353 (430)
102 2oaj_A Protein SNI1; WD40 repe 99.7 1.3E-16 4.3E-21 142.6 16.3 118 84-222 98-244 (902)
103 2xyi_A Probable histone-bindin 99.7 7.3E-16 2.5E-20 126.8 18.9 146 57-220 229-410 (430)
104 2vdu_B TRNA (guanine-N(7)-)-me 99.7 3.7E-16 1.3E-20 129.2 17.2 119 84-222 102-231 (450)
105 1pgu_A Actin interacting prote 99.7 1.1E-15 3.7E-20 130.1 20.2 145 53-222 57-240 (615)
106 4gq1_A NUP37; propeller, trans 99.7 1.4E-16 4.7E-21 129.7 14.0 130 79-222 132-288 (393)
107 3i2n_A WD repeat-containing pr 99.7 3.1E-16 1.1E-20 124.7 15.2 123 78-222 13-150 (357)
108 4gq1_A NUP37; propeller, trans 99.7 1.8E-16 6E-21 129.1 13.9 113 101-222 99-220 (393)
109 4a11_B DNA excision repair pro 99.7 1.9E-15 6.4E-20 122.2 19.4 147 57-222 97-278 (408)
110 2oit_A Nucleoporin 214KDA; NH2 99.7 9.4E-17 3.2E-21 132.5 11.4 116 84-219 92-222 (434)
111 3odt_A Protein DOA1; ubiquitin 99.7 1.3E-15 4.3E-20 119.0 17.0 119 79-222 138-257 (313)
112 3sfz_A APAF-1, apoptotic pepti 99.7 4.7E-16 1.6E-20 142.7 16.7 122 78-222 610-734 (1249)
113 4ggc_A P55CDC, cell division c 99.7 3.1E-15 1.1E-19 117.1 18.7 130 70-222 54-183 (318)
114 4gga_A P55CDC, cell division c 99.7 2.5E-15 8.4E-20 123.1 18.7 117 84-222 147-263 (420)
115 3v7d_B Cell division control p 99.7 2.1E-15 7E-20 124.7 17.3 120 78-222 116-238 (464)
116 1yfq_A Cell cycle arrest prote 99.7 6.2E-16 2.1E-20 122.4 12.7 116 80-220 8-131 (342)
117 1yfq_A Cell cycle arrest prote 99.7 6.7E-15 2.3E-19 116.5 17.0 117 84-222 150-284 (342)
118 2ovr_B FBW7, F-BOX/WD repeat p 99.6 1E-14 3.5E-19 120.1 17.4 116 78-222 154-270 (445)
119 1p22_A F-BOX/WD-repeat protein 99.6 5E-15 1.7E-19 121.8 15.3 116 78-222 291-416 (435)
120 3vu4_A KMHSV2; beta-propeller 99.6 4.2E-15 1.4E-19 119.3 13.8 124 78-221 190-337 (355)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.6 3.4E-14 1.2E-18 117.0 19.2 115 79-222 195-310 (445)
122 1p22_A F-BOX/WD-repeat protein 99.6 1.4E-14 4.7E-19 119.1 16.4 113 80-221 253-366 (435)
123 2w18_A PALB2, fancn, partner a 99.6 2.6E-14 9E-19 113.1 13.5 97 116-222 158-271 (356)
124 2oit_A Nucleoporin 214KDA; NH2 99.5 2.4E-13 8.3E-18 112.1 16.9 141 57-221 90-279 (434)
125 1l0q_A Surface layer protein; 99.5 2.4E-12 8.3E-17 103.8 19.3 116 84-222 73-191 (391)
126 1l0q_A Surface layer protein; 99.5 4.1E-12 1.4E-16 102.5 19.5 141 59-222 73-235 (391)
127 3bws_A Protein LP49; two-domai 99.5 6.5E-13 2.2E-17 108.6 12.5 119 84-222 122-245 (433)
128 3bws_A Protein LP49; two-domai 99.4 5.6E-12 1.9E-16 103.0 17.4 142 57-222 167-336 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.4 1.5E-11 5E-16 100.8 18.8 143 57-222 176-346 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.4 4E-11 1.4E-15 98.2 19.1 122 78-222 173-302 (415)
131 2ojh_A Uncharacterized protein 99.3 1.4E-10 4.7E-15 89.1 14.2 117 84-222 128-260 (297)
132 1ri6_A Putative isomerase YBHE 99.2 9E-10 3.1E-14 86.7 16.0 139 58-220 13-160 (343)
133 2ecf_A Dipeptidyl peptidase IV 99.1 1.1E-09 3.7E-14 95.6 14.5 120 84-222 36-183 (741)
134 1xfd_A DIP, dipeptidyl aminope 99.1 4E-10 1.4E-14 98.0 11.6 105 86-211 62-194 (723)
135 3hfq_A Uncharacterized protein 99.1 1.5E-08 5.1E-13 80.3 19.8 123 85-222 187-321 (347)
136 1ri6_A Putative isomerase YBHE 99.1 9.6E-09 3.3E-13 80.7 18.3 120 84-218 177-306 (343)
137 2ecf_A Dipeptidyl peptidase IV 99.1 1.4E-09 4.9E-14 94.8 14.3 100 87-211 111-230 (741)
138 1k32_A Tricorn protease; prote 99.1 6.5E-10 2.2E-14 100.8 12.0 138 60-222 296-463 (1045)
139 1nir_A Nitrite reductase; hemo 99.1 1.3E-09 4.5E-14 92.2 12.9 106 101-222 147-259 (543)
140 2ojh_A Uncharacterized protein 99.1 6E-09 2.1E-13 79.8 15.3 133 59-219 21-159 (297)
141 3vgz_A Uncharacterized protein 99.1 8.4E-09 2.9E-13 81.5 16.3 121 84-222 88-217 (353)
142 2z3z_A Dipeptidyl aminopeptida 99.1 2.3E-09 7.7E-14 93.1 13.5 118 84-221 120-294 (706)
143 3vgz_A Uncharacterized protein 99.1 3E-08 1E-12 78.3 18.8 115 87-222 143-264 (353)
144 3hfq_A Uncharacterized protein 99.0 1.6E-08 5.6E-13 80.1 17.0 142 59-219 15-170 (347)
145 3o4h_A Acylamino-acid-releasin 99.0 1.1E-09 3.6E-14 93.2 10.7 109 88-218 153-274 (582)
146 1xfd_A DIP, dipeptidyl aminope 99.0 2.4E-09 8.3E-14 93.0 12.4 116 87-222 116-291 (723)
147 1nir_A Nitrite reductase; hemo 99.0 2.6E-08 8.9E-13 84.3 17.6 114 86-221 180-312 (543)
148 3scy_A Hypothetical bacterial 99.0 8.7E-08 3E-12 76.3 19.4 122 84-222 210-341 (361)
149 3u4y_A Uncharacterized protein 99.0 2.3E-08 7.9E-13 78.5 15.6 116 84-221 175-305 (331)
150 3u4y_A Uncharacterized protein 99.0 5.4E-08 1.8E-12 76.4 16.9 135 58-220 18-160 (331)
151 1k32_A Tricorn protease; prote 99.0 1E-08 3.5E-13 93.1 13.9 114 84-219 378-501 (1045)
152 1jof_A Carboxy-CIS,CIS-muconat 98.9 2.6E-08 8.8E-13 79.9 14.6 142 60-221 14-178 (365)
153 1q7f_A NHL, brain tumor CG1071 98.9 1.5E-07 5.2E-12 72.5 18.2 117 85-223 164-283 (286)
154 1pby_B Quinohemoprotein amine 98.9 3E-08 1E-12 77.7 14.3 138 58-222 9-165 (337)
155 1jmx_B Amine dehydrogenase; ox 98.9 8.5E-09 2.9E-13 81.3 10.9 107 101-220 9-134 (349)
156 4a5s_A Dipeptidyl peptidase 4 98.9 1.4E-08 4.8E-13 88.9 12.2 114 86-222 18-143 (740)
157 1z68_A Fibroblast activation p 98.9 1E-08 3.5E-13 89.2 10.9 118 85-221 110-292 (719)
158 3o4h_A Acylamino-acid-releasin 98.8 3E-08 1E-12 84.3 12.3 111 86-222 111-229 (582)
159 1z68_A Fibroblast activation p 98.8 9.1E-09 3.1E-13 89.5 9.2 101 86-210 61-189 (719)
160 3scy_A Hypothetical bacterial 98.8 5.4E-07 1.8E-11 71.7 18.3 114 87-219 157-290 (361)
161 1jmx_B Amine dehydrogenase; ox 98.8 2.1E-07 7.1E-12 73.2 14.9 137 58-222 19-177 (349)
162 1pby_B Quinohemoprotein amine 98.7 1E-07 3.5E-12 74.6 10.9 106 104-222 2-126 (337)
163 1jof_A Carboxy-CIS,CIS-muconat 98.7 2.6E-06 8.7E-11 68.2 19.3 145 58-219 117-290 (365)
164 2z3z_A Dipeptidyl aminopeptida 98.7 6E-07 2.1E-11 77.8 16.7 126 84-222 257-393 (706)
165 3azo_A Aminopeptidase; POP fam 98.7 1.1E-07 3.8E-12 81.8 11.9 117 84-221 129-275 (662)
166 3fvz_A Peptidyl-glycine alpha- 98.7 3.1E-06 1.1E-10 66.7 18.7 120 87-220 198-322 (329)
167 1q7f_A NHL, brain tumor CG1071 98.7 6.3E-06 2.1E-10 63.3 19.0 115 84-219 120-237 (286)
168 2bkl_A Prolyl endopeptidase; m 98.6 2.2E-07 7.5E-12 80.8 11.2 115 85-221 121-262 (695)
169 1xip_A Nucleoporin NUP159; bet 98.6 5.1E-07 1.8E-11 73.0 11.8 105 84-221 88-192 (388)
170 1rwi_B Serine/threonine-protei 98.6 7.7E-06 2.6E-10 62.0 17.2 116 86-222 151-266 (270)
171 4a5s_A Dipeptidyl peptidase 4 98.6 1.6E-06 5.6E-11 75.8 14.8 122 84-222 111-296 (740)
172 3fvz_A Peptidyl-glycine alpha- 98.5 5.1E-06 1.8E-10 65.5 16.0 92 116-218 70-173 (329)
173 3azo_A Aminopeptidase; POP fam 98.5 2E-06 6.7E-11 74.0 14.5 115 86-220 189-325 (662)
174 3pe7_A Oligogalacturonate lyas 98.5 1.7E-06 5.7E-11 69.3 12.6 114 90-222 41-179 (388)
175 2xdw_A Prolyl endopeptidase; a 98.5 1.5E-06 5.1E-11 75.7 13.0 115 86-220 126-268 (710)
176 3pe7_A Oligogalacturonate lyas 98.5 5.4E-06 1.9E-10 66.3 15.1 118 84-221 80-226 (388)
177 3no2_A Uncharacterized protein 98.4 1.2E-05 4.1E-10 62.0 14.7 135 58-222 13-156 (276)
178 2dg1_A DRP35, lactonase; beta 98.4 6E-05 2.1E-09 59.0 18.1 116 84-220 86-213 (333)
179 1yr2_A Prolyl oligopeptidase; 98.4 3.7E-06 1.3E-10 73.6 12.0 115 86-221 164-304 (741)
180 3no2_A Uncharacterized protein 98.3 4.1E-05 1.4E-09 58.9 16.2 133 66-222 60-197 (276)
181 2dg1_A DRP35, lactonase; beta 98.3 5.3E-05 1.8E-09 59.3 16.8 115 84-220 44-171 (333)
182 3e5z_A Putative gluconolactona 98.3 6.6E-05 2.3E-09 57.9 16.0 115 84-219 68-201 (296)
183 2xdw_A Prolyl endopeptidase; a 98.2 5.8E-05 2E-09 65.7 16.8 120 87-221 173-321 (710)
184 1rwi_B Serine/threonine-protei 98.2 8.3E-05 2.8E-09 56.3 15.8 116 85-221 108-223 (270)
185 2oiz_A Aromatic amine dehydrog 98.2 5.9E-05 2E-09 60.3 14.6 65 146-221 260-335 (361)
186 1qks_A Cytochrome CD1 nitrite 98.2 2.7E-05 9.2E-10 66.2 13.0 105 102-222 166-277 (567)
187 2bkl_A Prolyl endopeptidase; m 98.2 6E-05 2.1E-09 65.4 15.1 143 60-222 121-306 (695)
188 2gop_A Trilobed protease; beta 98.2 2.7E-05 9.2E-10 61.3 11.8 102 85-210 59-190 (347)
189 1xip_A Nucleoporin NUP159; bet 98.1 1.7E-05 5.9E-10 64.1 10.4 112 85-222 38-157 (388)
190 2z2n_A Virginiamycin B lyase; 98.1 0.00078 2.7E-08 51.4 19.3 112 84-218 98-211 (299)
191 2z2n_A Virginiamycin B lyase; 98.1 0.00092 3.2E-08 50.9 19.6 113 84-218 56-169 (299)
192 3c5m_A Oligogalacturonate lyas 98.1 5E-06 1.7E-10 66.5 6.5 116 87-222 38-179 (396)
193 3e5z_A Putative gluconolactona 98.0 0.00026 8.9E-09 54.5 15.1 113 84-221 171-287 (296)
194 1qks_A Cytochrome CD1 nitrite 98.0 0.00024 8.3E-09 60.3 14.9 117 84-222 196-375 (567)
195 2oiz_A Aromatic amine dehydrog 98.0 0.00013 4.5E-09 58.3 12.3 72 116-202 287-360 (361)
196 3c5m_A Oligogalacturonate lyas 98.0 5.9E-05 2E-09 60.2 10.3 117 84-222 187-331 (396)
197 3dsm_A Uncharacterized protein 97.9 0.00037 1.3E-08 54.8 14.1 115 85-222 172-303 (328)
198 2qc5_A Streptogramin B lactona 97.9 0.0039 1.3E-07 47.4 19.4 113 84-218 61-174 (300)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 97.9 0.0023 7.9E-08 49.2 18.1 107 101-220 185-299 (314)
200 3iuj_A Prolyl endopeptidase; h 97.9 0.00024 8.2E-09 61.7 13.0 119 84-221 128-269 (693)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.00087 3E-08 51.7 14.4 115 86-222 118-258 (314)
202 3hrp_A Uncharacterized protein 97.8 0.00066 2.3E-08 55.2 14.2 114 85-221 131-250 (409)
203 2hz6_A Endoplasmic reticulum t 97.8 2.1E-06 7.3E-11 69.0 -0.8 134 58-222 17-151 (369)
204 1yr2_A Prolyl oligopeptidase; 97.8 0.0006 2.1E-08 59.6 14.5 115 88-221 212-351 (741)
205 3dsm_A Uncharacterized protein 97.8 0.00057 1.9E-08 53.7 13.1 117 84-222 83-214 (328)
206 3g4e_A Regucalcin; six bladed 97.8 0.0015 5.2E-08 50.4 14.9 115 86-222 99-231 (297)
207 3dr2_A Exported gluconolactona 97.7 0.0024 8.3E-08 49.4 15.9 114 84-220 85-224 (305)
208 2qc5_A Streptogramin B lactona 97.7 0.0035 1.2E-07 47.7 16.1 114 84-219 19-133 (300)
209 2hz6_A Endoplasmic reticulum t 97.7 8.3E-06 2.8E-10 65.5 0.6 105 101-222 7-113 (369)
210 2gop_A Trilobed protease; beta 97.6 0.00069 2.4E-08 53.1 11.2 104 86-220 172-291 (347)
211 3g4e_A Regucalcin; six bladed 97.6 0.0072 2.4E-07 46.5 16.6 103 87-208 151-260 (297)
212 3sjl_D Methylamine dehydrogena 97.6 0.00045 1.5E-08 55.7 9.5 106 101-222 42-171 (386)
213 2iwa_A Glutamine cyclotransfer 97.5 0.0036 1.2E-07 47.8 13.2 113 87-222 23-137 (266)
214 1kb0_A Quinohemoprotein alcoho 97.5 0.0042 1.4E-07 53.9 14.8 53 166-222 457-509 (677)
215 2mad_H Methylamine dehydrogena 97.4 0.0047 1.6E-07 49.5 13.5 107 101-222 30-158 (373)
216 1yiq_A Quinohemoprotein alcoho 97.3 0.0085 2.9E-07 52.1 15.0 54 165-222 454-507 (689)
217 3hrp_A Uncharacterized protein 97.3 0.0089 3E-07 48.5 14.0 118 84-221 218-355 (409)
218 2qe8_A Uncharacterized protein 97.2 0.026 8.9E-07 44.4 15.3 115 84-217 66-223 (343)
219 2ghs_A AGR_C_1268P; regucalcin 97.2 0.057 1.9E-06 42.1 17.8 101 87-208 181-290 (326)
220 3nok_A Glutaminyl cyclase; bet 97.1 0.016 5.4E-07 44.1 13.1 110 87-222 57-166 (268)
221 2mad_H Methylamine dehydrogena 97.1 0.045 1.5E-06 43.8 16.3 107 89-221 70-196 (373)
222 3mbr_X Glutamine cyclotransfer 97.1 0.027 9.1E-07 42.3 13.9 115 85-222 21-135 (243)
223 3nol_A Glutamine cyclotransfer 97.1 0.019 6.5E-07 43.6 12.9 113 87-222 45-157 (262)
224 3sjl_D Methylamine dehydrogena 97.0 0.012 4.2E-07 47.3 12.3 109 89-220 82-208 (386)
225 3c75_H MADH, methylamine dehyd 97.0 0.003 1E-07 51.6 8.8 106 101-222 82-211 (426)
226 2ghs_A AGR_C_1268P; regucalcin 96.9 0.057 1.9E-06 42.1 14.9 111 86-219 135-259 (326)
227 2qe8_A Uncharacterized protein 96.6 0.022 7.5E-07 44.8 10.9 116 85-222 17-156 (343)
228 3q7m_A Lipoprotein YFGL, BAMB; 96.5 0.04 1.4E-06 43.6 11.8 105 103-222 53-164 (376)
229 3dr2_A Exported gluconolactona 96.5 0.038 1.3E-06 42.5 11.2 105 86-214 189-301 (305)
230 2iwa_A Glutamine cyclotransfer 96.5 0.19 6.6E-06 38.2 16.8 102 104-222 77-183 (266)
231 1mda_H Methylamine dehydrogena 96.5 0.0054 1.8E-07 49.2 6.2 91 116-220 47-158 (368)
232 2xe4_A Oligopeptidase B; hydro 96.4 0.04 1.4E-06 48.4 11.9 116 86-221 175-305 (751)
233 2ece_A 462AA long hypothetical 96.4 0.11 3.8E-06 42.6 13.4 151 58-221 41-238 (462)
234 2ece_A 462AA long hypothetical 96.3 0.07 2.4E-06 43.8 12.0 106 101-218 147-287 (462)
235 3q7m_A Lipoprotein YFGL, BAMB; 96.3 0.1 3.4E-06 41.3 12.8 102 103-222 103-209 (376)
236 3c75_H MADH, methylamine dehyd 96.3 0.16 5.6E-06 41.4 14.2 79 89-187 122-218 (426)
237 1kv9_A Type II quinohemoprotei 96.3 0.13 4.3E-06 44.5 14.2 55 164-222 436-490 (668)
238 3iuj_A Prolyl endopeptidase; h 96.3 0.079 2.7E-06 45.9 12.9 114 86-220 235-359 (693)
239 3nok_A Glutaminyl cyclase; bet 96.0 0.19 6.4E-06 38.2 12.3 101 104-222 107-212 (268)
240 2ad6_A Methanol dehydrogenase 95.8 0.32 1.1E-05 41.2 14.4 55 164-222 442-496 (571)
241 1kb0_A Quinohemoprotein alcoho 95.7 0.062 2.1E-06 46.6 9.8 77 116-205 458-535 (677)
242 1yiq_A Quinohemoprotein alcoho 95.7 0.045 1.5E-06 47.6 8.7 76 116-204 456-532 (689)
243 3nol_A Glutamine cyclotransfer 95.6 0.52 1.8E-05 35.7 17.1 101 104-222 98-203 (262)
244 3hxj_A Pyrrolo-quinoline quino 95.6 0.23 8E-06 38.0 11.8 110 85-221 215-325 (330)
245 3mbr_X Glutamine cyclotransfer 95.4 0.58 2E-05 35.0 16.7 102 103-222 75-181 (243)
246 1mda_H Methylamine dehydrogena 95.4 0.045 1.6E-06 43.8 7.2 52 167-222 295-348 (368)
247 3hxj_A Pyrrolo-quinoline quino 95.2 0.41 1.4E-05 36.6 12.1 105 85-218 137-242 (330)
248 3pbp_A Nucleoporin NUP82; beta 95.1 0.83 2.8E-05 37.3 13.4 116 86-215 67-207 (452)
249 1fwx_A Nitrous oxide reductase 94.7 0.08 2.7E-06 44.9 7.0 106 85-208 277-406 (595)
250 1k3i_A Galactose oxidase precu 94.6 0.65 2.2E-05 39.9 12.8 109 102-221 197-324 (656)
251 1kv9_A Type II quinohemoprotei 94.1 0.73 2.5E-05 39.8 11.9 59 117-183 272-338 (668)
252 1fwx_A Nitrous oxide reductase 93.9 0.75 2.6E-05 39.1 11.3 66 146-220 283-361 (595)
253 1flg_A Protein (quinoprotein e 93.8 0.32 1.1E-05 41.4 8.9 54 165-222 465-518 (582)
254 4a2l_A BT_4663, two-component 92.8 4.7 0.00016 35.3 19.4 141 59-221 309-481 (795)
255 3tc9_A Hypothetical hydrolase; 92.7 3.4 0.00012 33.5 15.4 66 146-219 232-300 (430)
256 2p9w_A MAL S 1 allergenic prot 92.4 3.2 0.00011 32.5 12.0 117 86-220 64-215 (334)
257 1w6s_A Methanol dehydrogenase 92.3 1.3 4.5E-05 37.8 10.6 55 164-222 451-505 (599)
258 3pbp_A Nucleoporin NUP82; beta 92.3 3.5 0.00012 33.6 12.4 70 145-220 71-158 (452)
259 3qqz_A Putative uncharacterize 91.7 3.3 0.00011 31.1 14.9 116 84-218 26-149 (255)
260 1npe_A Nidogen, entactin; glyc 91.5 3.2 0.00011 30.7 17.2 115 85-219 36-154 (267)
261 2xe4_A Oligopeptidase B; hydro 90.4 2.6 9E-05 36.8 10.8 115 89-220 225-354 (751)
262 1tl2_A L10, protein (tachylect 89.6 1.7 5.7E-05 32.2 7.4 108 85-214 41-157 (236)
263 2fp8_A Strictosidine synthase; 89.5 5.7 0.00019 30.3 13.7 115 86-220 81-216 (322)
264 1flg_A Protein (quinoprotein e 89.5 1.2 4.2E-05 37.8 7.8 75 116-203 467-542 (582)
265 2ad6_A Methanol dehydrogenase 89.2 2.2 7.5E-05 36.1 9.1 78 116-206 445-523 (571)
266 2p4o_A Hypothetical protein; p 88.5 6.7 0.00023 29.7 16.0 113 85-220 32-147 (306)
267 4a2l_A BT_4663, two-component 88.0 13 0.00044 32.5 18.1 116 85-221 310-437 (795)
268 2fp8_A Strictosidine synthase; 87.7 7.7 0.00026 29.6 13.3 117 86-221 20-175 (322)
269 3tc9_A Hypothetical hydrolase; 87.1 11 0.00037 30.5 13.7 112 86-221 138-258 (430)
270 1npe_A Nidogen, entactin; glyc 86.3 8.2 0.00028 28.4 17.9 115 85-220 79-198 (267)
271 2p4o_A Hypothetical protein; p 86.1 5.2 0.00018 30.4 8.9 66 146-221 38-105 (306)
272 4hw6_A Hypothetical protein, I 85.6 13 0.00045 30.1 16.7 114 88-218 231-372 (433)
273 2p9w_A MAL S 1 allergenic prot 83.9 14 0.00047 29.0 13.0 115 86-217 14-165 (334)
274 1w6s_A Methanol dehydrogenase 83.6 5.2 0.00018 34.1 8.4 69 106-185 124-198 (599)
275 3v9f_A Two-component system se 82.8 23 0.0008 30.8 18.2 137 60-220 363-524 (781)
276 1k3i_A Galactose oxidase precu 82.7 2.3 8E-05 36.4 6.1 64 155-221 197-275 (656)
277 4hw6_A Hypothetical protein, I 82.2 18 0.00063 29.2 11.5 112 86-221 140-260 (433)
278 3kya_A Putative phosphatase; s 81.6 22 0.00074 29.6 13.5 66 146-218 253-339 (496)
279 3v64_C Agrin; beta propeller, 78.4 22 0.00074 27.7 19.0 117 84-219 72-190 (349)
280 3v9f_A Two-component system se 77.7 35 0.0012 29.7 17.2 114 85-221 363-479 (781)
281 3ii7_A Kelch-like protein 7; p 77.7 16 0.00054 27.5 8.8 104 103-221 12-128 (306)
282 3qqz_A Putative uncharacterize 76.1 22 0.00075 26.6 16.9 119 85-219 70-203 (255)
283 2be1_A Serine/threonine-protei 75.5 4.8 0.00016 31.7 5.3 109 104-222 11-132 (339)
284 2vpj_A Kelch-like protein 12; 74.9 22 0.00075 26.6 8.9 62 155-221 206-279 (301)
285 2ism_A Putative oxidoreductase 74.0 29 0.001 27.0 12.1 113 84-208 30-153 (352)
286 3v65_B Low-density lipoprotein 73.9 31 0.0011 27.2 17.9 117 84-219 115-233 (386)
287 1ijq_A LDL receptor, low-densi 72.3 30 0.001 26.3 16.1 116 84-218 29-150 (316)
288 4gq2_M Nucleoporin NUP120; bet 72.1 54 0.0019 29.6 11.8 28 155-185 246-273 (950)
289 4gq2_M Nucleoporin NUP120; bet 69.9 5.3 0.00018 36.1 4.9 32 191-222 237-268 (950)
290 3sov_A LRP-6, low-density lipo 69.8 35 0.0012 26.1 14.5 117 85-219 35-153 (318)
291 2xbg_A YCF48-like protein; pho 67.8 39 0.0013 25.9 15.5 106 85-216 122-230 (327)
292 1n7d_A LDL receptor, low-densi 67.6 40 0.0014 29.2 9.8 104 102-219 464-570 (699)
293 3kya_A Putative phosphatase; s 66.2 56 0.0019 27.1 13.0 116 86-219 140-277 (496)
294 3ei3_A DNA damage-binding prot 65.8 86 0.0029 29.1 13.3 60 157-221 524-592 (1158)
295 3v64_C Agrin; beta propeller, 65.2 46 0.0016 25.8 19.0 115 86-219 117-233 (349)
296 1n7d_A LDL receptor, low-densi 62.8 40 0.0014 29.2 8.9 69 146-220 546-614 (699)
297 2xn4_A Kelch-like protein 2; s 62.3 46 0.0016 24.8 10.4 62 155-221 204-277 (302)
298 3a9g_A Putative uncharacterize 61.8 55 0.0019 25.5 11.6 113 84-208 28-153 (354)
299 3v65_B Low-density lipoprotein 61.4 58 0.002 25.6 17.4 116 85-221 202-319 (386)
300 3sbq_A Nitrous-oxide reductase 59.8 82 0.0028 26.9 10.0 77 85-175 323-408 (638)
301 4fhn_B Nucleoporin NUP120; pro 59.4 51 0.0017 30.4 9.3 28 155-185 248-275 (1139)
302 3f7f_A Nucleoporin NUP120; nuc 57.0 14 0.00046 32.3 4.7 29 192-222 224-252 (729)
303 3sre_A PON1, serum paraoxonase 56.8 70 0.0024 25.1 10.5 30 190-219 221-251 (355)
304 1ijq_A LDL receptor, low-densi 55.4 65 0.0022 24.4 16.3 114 85-219 77-194 (316)
305 4fhn_B Nucleoporin NUP120; pro 55.1 7.3 0.00025 35.9 3.0 32 191-222 239-270 (1139)
306 3ei3_A DNA damage-binding prot 55.1 1.3E+02 0.0046 27.9 16.6 114 84-220 885-999 (1158)
307 2xn4_A Kelch-like protein 2; s 54.8 63 0.0021 24.0 11.3 62 155-221 155-230 (302)
308 3amr_A 3-phytase; beta-propell 54.6 77 0.0026 25.0 17.3 145 59-219 98-262 (355)
309 2xbg_A YCF48-like protein; pho 54.4 69 0.0024 24.4 14.6 106 84-213 162-272 (327)
310 3ii7_A Kelch-like protein 7; p 53.9 66 0.0022 23.9 11.0 106 102-221 55-179 (306)
311 3amr_A 3-phytase; beta-propell 49.8 93 0.0032 24.5 12.0 105 101-219 38-161 (355)
312 1tl2_A L10, protein (tachylect 48.8 30 0.001 25.6 4.8 60 146-218 47-114 (236)
313 1zgk_A Kelch-like ECH-associat 48.8 81 0.0028 23.5 9.3 62 155-221 168-241 (308)
314 3m0c_C LDL receptor, low-densi 48.7 1.4E+02 0.0049 26.3 15.9 117 84-219 423-545 (791)
315 4asc_A Kelch repeat and BTB do 48.1 84 0.0029 23.5 10.3 109 102-222 98-223 (315)
316 2zwa_A Leucine carboxyl methyl 46.4 1.4E+02 0.0049 25.7 10.1 65 155-222 500-579 (695)
317 2be1_A Serine/threonine-protei 45.9 28 0.00097 27.2 4.7 63 156-221 10-77 (339)
318 3sov_A LRP-6, low-density lipo 45.3 99 0.0034 23.5 17.7 115 85-219 79-196 (318)
319 3s94_A LRP-6, low-density lipo 43.3 1.5E+02 0.0052 25.1 13.9 105 84-207 39-144 (619)
320 3p5b_L Low density lipoprotein 41.4 1.3E+02 0.0044 23.7 17.1 117 84-219 111-233 (400)
321 2vpj_A Kelch-like protein 12; 41.0 1.1E+02 0.0036 22.6 11.4 62 155-221 159-232 (301)
322 3p5b_L Low density lipoprotein 39.5 1.4E+02 0.0047 23.6 20.3 116 85-220 159-277 (400)
323 1zgk_A Kelch-like ECH-associat 37.9 1.2E+02 0.0042 22.5 10.5 62 155-221 215-288 (308)
324 2woz_A Kelch repeat and BTB do 37.7 1.3E+02 0.0043 22.5 9.7 107 102-222 109-233 (318)
325 3sre_A PON1, serum paraoxonase 37.6 1.5E+02 0.005 23.3 14.9 130 60-210 139-287 (355)
326 3m0c_C LDL receptor, low-densi 37.5 2.2E+02 0.0074 25.2 18.8 115 85-219 471-588 (791)
327 3f7f_A Nucleoporin NUP120; nuc 32.7 37 0.0013 29.7 3.6 28 155-185 230-257 (729)
328 3sbq_A Nitrous-oxide reductase 31.1 2.3E+02 0.0079 24.3 8.0 65 155-220 333-408 (638)
329 2uvk_A YJHT; unknown function, 30.3 1.8E+02 0.0061 22.0 10.5 51 155-210 65-128 (357)
330 2xzh_A Clathrin heavy chain 1; 29.1 2.1E+02 0.0073 22.6 14.5 66 143-216 263-328 (365)
331 2g8s_A Glucose/sorbosone dehyd 28.1 2.1E+02 0.007 22.1 11.1 30 84-123 17-47 (353)
332 2ism_A Putative oxidoreductase 26.5 2.2E+02 0.0075 21.9 9.0 68 143-219 34-113 (352)
333 1cru_A Protein (soluble quinop 25.2 2.7E+02 0.0092 22.5 13.9 115 84-208 26-162 (454)
334 2zwa_A Leucine carboxyl methyl 25.2 3.3E+02 0.011 23.4 9.9 111 102-221 500-636 (695)
335 2xzh_A Clathrin heavy chain 1; 24.6 2.6E+02 0.0089 22.1 13.2 103 101-220 76-189 (365)
336 1q47_A Semaphorin 3A; beta pro 23.6 2.8E+02 0.0097 22.8 7.4 59 157-215 422-487 (495)
337 3das_A Putative oxidoreductase 23.1 1.1E+02 0.0037 23.9 4.6 30 193-222 35-64 (347)
338 2g8s_A Glucose/sorbosone dehyd 21.6 2.8E+02 0.0095 21.3 7.2 59 155-218 288-350 (353)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.91 E-value=9.3e-23 Score=160.57 Aligned_cols=148 Identities=16% Similarity=0.256 Sum_probs=125.5
Q ss_pred cccccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCC
Q psy3599 52 RNDQLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANA 113 (223)
Q Consensus 52 ~~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~ 113 (223)
...+.+|.+.|.+++|+|+++++.+. .+..| ..+|.+++|+ +++.+|++++.|+
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~-~~~v~~~~~~-------~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVT-ETPVRAGKFI-------ARKNWIIVGSDDF 77 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEE-------GGGTEEEEEETTS
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeecc-CCcEEEEEEe-------CCCCEEEEECCCC
Confidence 34456788999999999988876543 23345 7899999999 9999999999999
Q ss_pred eEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccc-ccceeecccccC
Q psy3599 114 VCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHK-NAVNKLQGHACP 191 (223)
Q Consensus 114 ~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~-~~~~~~~~h~~~ 191 (223)
.+++||..++..+.. + .+|... +.+ +|+| ++.++++|+.|+.|++||+++ + .+...+.+|...
T Consensus 78 --~i~vwd~~~~~~~~~-~-~~h~~~---v~~~~~~~-----~~~~l~sgs~D~~v~lWd~~~---~~~~~~~~~~h~~~ 142 (304)
T 2ynn_A 78 --RIRVFNYNTGEKVVD-F-EAHPDY---IRSIAVHP-----TKPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHEHF 142 (304)
T ss_dssp --EEEEEETTTCCEEEE-E-ECCSSC---EEEEEECS-----SSSEEEEEETTSCEEEEEGGG---TTEEEEEECCCCSC
T ss_pred --EEEEEECCCCcEEEE-E-eCCCCc---EEEEEEcC-----CCCEEEEECCCCeEEEEECCC---CcchhhhhcccCCc
Confidence 999999998877664 4 489888 555 8999 799999999999999999988 5 456778899999
Q ss_pred EEEEEEec-CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 192 VLGVSFNY-DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 192 v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|.+++|+| ++..|++|+.|++|++||+++++
T Consensus 143 v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 99999999 57899999999999999997654
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.90 E-value=2.8e-22 Score=160.78 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=118.5
Q ss_pred ccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCC-eEEEEEeCCCeEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDP-TLLVNIAANAVCIL 117 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~-~~l~~~~~~~~~~v 117 (223)
+|.+.|.+++|+|+|+++.+. .+..| ...|.+++|+ +++ .+|++++.|+ .+
T Consensus 125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h-~~~V~~~~~~-------~~~~~~l~s~s~D~--~v 194 (344)
T 4gqb_B 125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH-AAQVTCVAAS-------PHKDSVFLSCSEDN--RI 194 (344)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEC-------SSCTTEEEEEETTS--CE
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc-CCceEEEEec-------CCCCCceeeecccc--cc
Confidence 688999999999998877554 34456 8899999999 665 5789999999 89
Q ss_pred EEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEE
Q psy3599 118 KVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVS 196 (223)
Q Consensus 118 ~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 196 (223)
++||+.+++.+.......|... +.+ +|+|. ++.++++|+.||.|++||+++ ++++..+.+|...|++++
T Consensus 195 ~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~p~----~~~~l~sg~~dg~v~~wd~~~---~~~~~~~~~h~~~v~~v~ 264 (344)
T 4gqb_B 195 LLWDTRCPKPASQIGCSAPGYL---PTSLAWHPQ----QSEVFVFGDENGTVSLVDTKS---TSCVLSSAVHSQCVTGLV 264 (344)
T ss_dssp EEEETTSSSCEEECC----CCC---EEEEEECSS----CTTEEEEEETTSEEEEEESCC-----CCEEEECCSSCEEEEE
T ss_pred ccccccccceeeeeecceeecc---ceeeeecCC----CCcceEEeccCCcEEEEECCC---CcEEEEEcCCCCCEEEEE
Confidence 9999998876654322233333 444 88885 578999999999999999999 899999999999999999
Q ss_pred EecCC-CEEEEEeCCCcEEEeeCCCCC
Q psy3599 197 FNYDE-SLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 197 ~~~~~-~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|+|++ .+|++|+.|++|+|||+++++
T Consensus 265 fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 265 FSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred EccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 99997 579999999999999998764
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.89 E-value=1e-21 Score=155.99 Aligned_cols=140 Identities=24% Similarity=0.347 Sum_probs=121.3
Q ss_pred ccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILK 118 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 118 (223)
.+...|.++.|+|+|+++.+. .+..| ..+|.+++|+ |++.+|++++.|+ .++
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~s-------pd~~~l~s~s~dg--~i~ 231 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH-AMPIRSLTFS-------PDSQLLVTASDDG--YIK 231 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCCCEEEEC-------TTSCEEEEECTTS--CEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc-CCceeEEEEc-------CCCCEEEEEcCCC--eEE
Confidence 456678889999988876543 23445 7899999999 9999999999999 899
Q ss_pred EecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEE
Q psy3599 119 VLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSF 197 (223)
Q Consensus 119 i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 197 (223)
+||..++..+.. + .+|... +.+ +|+| ++.+|++|+.|+.|++||+.+ ++++..+.+|...|.+++|
T Consensus 232 iwd~~~~~~~~~-~-~~h~~~---v~~~~~sp-----~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~h~~~v~~v~~ 298 (321)
T 3ow8_A 232 IYDVQHANLAGT-L-SGHASW---VLNVAFCP-----DDTHFVSSSSDKSVKVWDVGT---RTCVHTFFDHQDQVWGVKY 298 (321)
T ss_dssp EEETTTCCEEEE-E-CCCSSC---EEEEEECT-----TSSEEEEEETTSCEEEEETTT---TEEEEEECCCSSCEEEEEE
T ss_pred EEECCCcceeEE-E-cCCCCc---eEEEEECC-----CCCEEEEEeCCCcEEEEeCCC---CEEEEEEcCCCCcEEEEEE
Confidence 999988766553 4 488888 555 8999 799999999999999999999 8999999999999999999
Q ss_pred ecCCCEEEEEeCCCcEEEeeCC
Q psy3599 198 NYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 198 ~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
+|++..|++++.|+.|++||+.
T Consensus 299 s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 299 NGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CTTSSEEEEEETTCCEEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999963
No 4
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.89 E-value=2.4e-21 Score=152.52 Aligned_cols=147 Identities=27% Similarity=0.416 Sum_probs=127.0
Q ss_pred ccccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCe
Q psy3599 53 NDQLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAV 114 (223)
Q Consensus 53 ~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~ 114 (223)
..+.+|.+.|.++.|+|+++++.+. .+..| ...|.+++|+ +++.+|++++.++
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h-~~~v~~~~~~-------~~~~~l~s~~~d~- 87 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH-KLGISDVAWS-------SDSNLLVSASDDK- 87 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS-
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccC-CCceEEEEEc-------CCCCEEEEECCCC-
Confidence 3344788999999999988776543 23345 7889999999 9999999999999
Q ss_pred EEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEE
Q psy3599 115 CILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVL 193 (223)
Q Consensus 115 ~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~ 193 (223)
.+++||..++..+.. + .+|... +.+ .|+| ++.++++|+.|+.|++||+++ ++++..+..|...|.
T Consensus 88 -~i~vwd~~~~~~~~~-~-~~~~~~---v~~~~~~~-----~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~~~~v~ 153 (312)
T 4ery_A 88 -TLKIWDVSSGKCLKT-L-KGHSNY---VFCCNFNP-----QSNLIVSGSFDESVRIWDVKT---GKCLKTLPAHSDPVS 153 (312)
T ss_dssp -EEEEEETTTCCEEEE-E-ECCSSC---EEEEEECS-----SSSEEEEEETTSCEEEEETTT---CCEEEEECCCSSCEE
T ss_pred -EEEEEECCCCcEEEE-E-cCCCCC---EEEEEEcC-----CCCEEEEEeCCCcEEEEECCC---CEEEEEecCCCCcEE
Confidence 999999998876654 3 488877 555 8999 799999999999999999999 888999999999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 194 GVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 194 ~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++.|+|++.+|++++.|+.|++||+++++
T Consensus 154 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 154 AVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 99999999999999999999999998764
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.89 E-value=9.8e-22 Score=161.01 Aligned_cols=146 Identities=19% Similarity=0.277 Sum_probs=127.9
Q ss_pred cccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeE
Q psy3599 54 DQLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVC 115 (223)
Q Consensus 54 ~~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (223)
.+.+|.+.|.++.|+|++.++.+. .+..| ...|.+++|+ +++.+|++++.|+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h-~~~V~~v~~~-------~~~~~l~sgs~D~-- 172 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGH-TDSVQDISFD-------HSGKLLASCSADM-- 172 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS--
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEecc-CCcEEEEEEc-------CCCCEEEEEeCCC--
Confidence 344899999999999988776543 34456 7899999999 9999999999999
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEE
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLG 194 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 194 (223)
.+++||..++..+.. + .+|... +.+ .|+| ++.++++|+.|+.|++||+++ +.++..+.+|...|.+
T Consensus 173 ~i~iwd~~~~~~~~~-~-~~h~~~---V~~v~~~p-----~~~~l~s~s~D~~i~~wd~~~---~~~~~~~~~h~~~v~~ 239 (410)
T 1vyh_C 173 TIKLWDFQGFECIRT-M-HGHDHN---VSSVSIMP-----NGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRM 239 (410)
T ss_dssp CCCEEETTSSCEEEC-C-CCCSSC---EEEEEECS-----SSSEEEEEETTSEEEEEETTT---CCEEEEEECCSSCEEE
T ss_pred eEEEEeCCCCceeEE-E-cCCCCC---EEEEEEeC-----CCCEEEEEeCCCeEEEEECCC---CcEEEEEeCCCccEEE
Confidence 899999998876654 3 488887 565 8999 799999999999999999999 8999999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 195 VSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 195 v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+.|+|++.+|++|+.|++|++||+++++
T Consensus 240 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 240 VRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9999999999999999999999998764
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.88 E-value=4.3e-21 Score=151.02 Aligned_cols=148 Identities=16% Similarity=0.238 Sum_probs=120.4
Q ss_pred ccccCCcEEEEEECCCCceeeee-------------------eeeecCCCCeeEEEEeecccccCC-CCeEEEEEeCCCe
Q psy3599 55 QLRSTGVIVSILCDDLGRLSKGK-------------------RLVLSQDCPITCLSWRSWISREAR-DPTLLVNIAANAV 114 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~~~~-------------------~~~~~~~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~ 114 (223)
+.+|.+.|.++.++|+++++.+. .+..| ...|.+++|+ | ++.+|++++.|+
T Consensus 93 ~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h-~~~v~~v~~~-------p~~~~~l~sgs~D~- 163 (304)
T 2ynn_A 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGH-EHFVMCVAFN-------PKDPSTFASGCLDR- 163 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCC-CSCEEEEEEC-------TTCTTEEEEEETTS-
T ss_pred EeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhccc-CCcEEEEEEC-------CCCCCEEEEEeCCC-
Confidence 34688889999999987765433 23345 7899999999 5 788999999999
Q ss_pred EEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEE
Q psy3599 115 CILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVL 193 (223)
Q Consensus 115 ~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~ 193 (223)
.+++||+..+....... .+|... +.. .|+|.. ++.+|++|+.|+.|++||+++ ++++..+.+|...|.
T Consensus 164 -~v~iwd~~~~~~~~~~~-~~~~~~---v~~~~~~~~~---~~~~l~s~s~D~~i~iWd~~~---~~~~~~~~~h~~~v~ 232 (304)
T 2ynn_A 164 -TVKVWSLGQSTPNFTLT-TGQERG---VNYVDYYPLP---DKPYMITASDDLTIKIWDYQT---KSCVATLEGHMSNVS 232 (304)
T ss_dssp -EEEEEETTCSSCSEEEE-CCCTTC---EEEEEECCST---TCCEEEEEETTSEEEEEETTT---TEEEEEEECCSSCEE
T ss_pred -eEEEEECCCCCccceec-cCCcCc---EEEEEEEEcC---CCCEEEEEcCCCeEEEEeCCC---CccceeeCCCCCCEE
Confidence 99999987665443332 255455 444 666521 578999999999999999999 899999999999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 194 GVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 194 ~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+++|+|++.+|++|+.||+|++||+++++
T Consensus 233 ~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 99999999999999999999999998765
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.88 E-value=1.3e-21 Score=155.44 Aligned_cols=142 Identities=23% Similarity=0.312 Sum_probs=119.4
Q ss_pred cCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEE
Q psy3599 58 STGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKV 119 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 119 (223)
+...+..+.|+|+++.+.+. .+..+ ...|.+++|+ |++.+|++++.++ .+++
T Consensus 121 ~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~-~~~v~~~~~s-------pdg~~lasg~~dg--~i~i 190 (321)
T 3ow8_A 121 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR-GKFILSIAYS-------PDGKYLASGAIDG--IINI 190 (321)
T ss_dssp CTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS-SSCEEEEEEC-------TTSSEEEEEETTS--CEEE
T ss_pred CCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC-CceEEEEEEC-------CCCCEEEEEcCCC--eEEE
Confidence 44456667777777665433 22334 6789999999 9999999999999 8999
Q ss_pred ecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEe
Q psy3599 120 LDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFN 198 (223)
Q Consensus 120 ~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 198 (223)
||..++..+.. + .+|... +.+ +|+| ++.+|++|+.|+.|++||++. ++++..+.+|...|.+++|+
T Consensus 191 wd~~~~~~~~~-~-~~h~~~---v~~l~~sp-----d~~~l~s~s~dg~i~iwd~~~---~~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 191 FDIATGKLLHT-L-EGHAMP---IRSLTFSP-----DSQLLVTASDDGYIKIYDVQH---ANLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp EETTTTEEEEE-E-CCCSSC---CCEEEECT-----TSCEEEEECTTSCEEEEETTT---CCEEEEECCCSSCEEEEEEC
T ss_pred EECCCCcEEEE-E-cccCCc---eeEEEEcC-----CCCEEEEEcCCCeEEEEECCC---cceeEEEcCCCCceEEEEEC
Confidence 99998876654 4 488877 444 8999 799999999999999999999 88889999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 199 YDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 199 ~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|++.+|++++.|++|++||+++++
T Consensus 258 p~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 258 PDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCE
Confidence 999999999999999999998764
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.88 E-value=4.4e-21 Score=153.81 Aligned_cols=145 Identities=17% Similarity=0.281 Sum_probs=116.4
Q ss_pred cCCcEEEEEECCCCceeeeee------e---------------------eecCCCCeeEEEEeecccccCCCCeEEEEEe
Q psy3599 58 STGVIVSILCDDLGRLSKGKR------L---------------------VLSQDCPITCLSWRSWISREARDPTLLVNIA 110 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~~------~---------------------~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~ 110 (223)
+.+.|.++.|+|+|+++.... + .......|.+++|+ +++ .|++++
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-------~d~-~l~~~s 100 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWV-------GER-GILVAS 100 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEE-------TTT-EEEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEe-------CCC-eEEEEE
Confidence 456788888888887765431 0 01114579999999 775 566888
Q ss_pred CCCeEEEEEecCCCceEEee--eeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecc
Q psy3599 111 ANAVCILKVLDKEGAVQLKR--KFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQG 187 (223)
Q Consensus 111 ~~~~~~v~i~d~~~~~~~~~--~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~ 187 (223)
.++ .|++||+.+++.+.. ....+|... |.+ +|+| ++.+|++|+.|+.|++||+.+ ++++..+.+
T Consensus 101 ~dg--~v~lWd~~~~~~~~~~~~~~~~H~~~---V~~v~~sp-----dg~~l~sgs~d~~i~iwd~~~---~~~~~~~~~ 167 (344)
T 4gqb_B 101 DSG--AVELWELDENETLIVSKFCKYEHDDI---VSTVSVLS-----SGTQAVSGSKDICIKVWDLAQ---QVVLSSYRA 167 (344)
T ss_dssp TTS--EEEEEEECTTSSCEEEEEEEECCSSC---EEEEEECT-----TSSEEEEEETTSCEEEEETTT---TEEEEEECC
T ss_pred CCC--EEEEEeccCCCceeEeeccccCCCCC---EEEEEECC-----CCCEEEEEeCCCeEEEEECCC---CcEEEEEcC
Confidence 888 899999987754322 111388888 666 8999 799999999999999999999 899999999
Q ss_pred cccCEEEEEEecCC-CEEEEEeCCCcEEEeeCCCCCC
Q psy3599 188 HACPVLGVSFNYDE-SLLATSDYQGLIILWSREKHEP 223 (223)
Q Consensus 188 h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~~ 223 (223)
|...|.+++|+|++ .+|++++.|++|++||++++++
T Consensus 168 h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 168 HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP 204 (344)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC
T ss_pred cCCceEEEEecCCCCCceeeeccccccccccccccce
Confidence 99999999999987 5789999999999999998763
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.88 E-value=3.8e-21 Score=153.64 Aligned_cols=141 Identities=17% Similarity=0.252 Sum_probs=119.1
Q ss_pred cccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEE
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCIL 117 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v 117 (223)
.+|.+.|.++.++|+++++.+. .+..| ...|.+++|+ |++.+|++++.|+ .+
T Consensus 181 ~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~-------p~~~~l~s~s~d~--~v 250 (340)
T 1got_B 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH-ESDINAICFF-------PNGNAFATGSDDA--TC 250 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS--CE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC-cCCEEEEEEc-------CCCCEEEEEcCCC--cE
Confidence 3688899999999988766443 23445 7899999999 9999999999999 89
Q ss_pred EEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEE
Q psy3599 118 KVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVS 196 (223)
Q Consensus 118 ~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 196 (223)
++||+.++..+... .|......+.+ +|+| ++.++++|+.|+.|++||+.+ ++.+..+.+|...|.+++
T Consensus 251 ~iwd~~~~~~~~~~---~~~~~~~~v~~~~~s~-----~g~~l~~g~~d~~i~vwd~~~---~~~~~~~~~h~~~v~~~~ 319 (340)
T 1got_B 251 RLFDLRADQELMTY---SHDNIICGITSVSFSK-----SGRLLLAGYDDFNCNVWDALK---ADRAGVLAGHDNRVSCLG 319 (340)
T ss_dssp EEEETTTTEEEEEE---CCTTCCSCEEEEEECT-----TSSEEEEEETTSEEEEEETTT---CCEEEEEECCSSCEEEEE
T ss_pred EEEECCCCcEEEEE---ccCCcccceEEEEECC-----CCCEEEEECCCCeEEEEEccc---CcEeeEeecCCCcEEEEE
Confidence 99999988666542 33332112665 8999 799999999999999999998 888899999999999999
Q ss_pred EecCCCEEEEEeCCCcEEEee
Q psy3599 197 FNYDESLLATSDYQGLIILWS 217 (223)
Q Consensus 197 ~~~~~~~l~s~s~d~~i~iwd 217 (223)
|+|++.+|+||+.|++|++||
T Consensus 320 ~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 320 VTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEEC
T ss_pred EcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999997
No 10
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=3.6e-21 Score=155.46 Aligned_cols=144 Identities=13% Similarity=0.175 Sum_probs=114.6
Q ss_pred ccCCcEEEEEECCCCceeeee-------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCC--eE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK-------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANA--VC 115 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~-------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~--~~ 115 (223)
.+.+.|..+.|+|+|+++... ....| ...|.+++|+ |++.++++++.++ ..
T Consensus 174 ~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~fs-------pdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 174 ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDK-NWSLSKINFI-------ADDTVLIAASLKKGKGI 245 (365)
T ss_dssp ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCT-TEEEEEEEEE-------ETTEEEEEEEESSSCCE
T ss_pred CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCC-CCCEEEEEEc-------CCCCEEEEEecCCccee
Confidence 577889999999999887543 11223 6689999999 8999999887443 12
Q ss_pred EEEEecCCCceEE---eeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceee-ccccc
Q psy3599 116 ILKVLDKEGAVQL---KRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKL-QGHAC 190 (223)
Q Consensus 116 ~v~i~d~~~~~~~---~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~~h~~ 190 (223)
.+++|+....... ...+ .+|... +.+ +|+| ++.+|++|+.|+.|+|||+++ ++++..+ ++|..
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~-~~~~~~---V~~~~~Sp-----dg~~lasgs~D~~V~iwd~~~---~~~~~~~~~gH~~ 313 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQV-TNRFKG---ITSMDVDM-----KGELAVLASNDNSIALVKLKD---LSMSKIFKQAHSF 313 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEE-ESSCSC---EEEEEECT-----TSCEEEEEETTSCEEEEETTT---TEEEEEETTSSSS
T ss_pred EEeecccccceecceeeeee-cCCCCC---eEeEEECC-----CCCceEEEcCCCEEEEEECCC---CcEEEEecCcccC
Confidence 4667776654321 1122 377776 666 8999 899999999999999999999 8888875 78999
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 191 PVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 191 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
.|++++|+|++.+|||||.|++|+|||+..
T Consensus 314 ~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 314 AITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999999999999999999864
No 11
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.87 E-value=3e-21 Score=152.61 Aligned_cols=149 Identities=13% Similarity=0.085 Sum_probs=111.1
Q ss_pred ccCCcEEEEEECCCCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccc
Q psy3599 57 RSTGVIVSILCDDLGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNH 136 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h 136 (223)
+|++.|..+.++++|+.+. .+..| ...++.++|++ .+.++.+|++++.|+ ++++||+++++.+... . +|
T Consensus 154 g~d~~V~~~~~s~dG~~~~--s~~~~-~~~v~~l~fs~----~~g~~~~LaSgS~D~--TIkIWDl~TGk~l~tL-~-g~ 222 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKE--NQFLM-PPEETILTFAE----VQGMQEALLGTTIMN--NIVIWNLKTGQLLKKM-H-ID 222 (356)
T ss_dssp STTCEEEEEEECTTSCEEE--EEEEC-CCSSCEEEEEE----EETSTTEEEEEETTS--EEEEEETTTCCEEEEE-E-CC
T ss_pred CCCCcEEEEEECCCCceee--eeccC-CCceeeEEeec----cCCCCceEEEecCCC--cEEEEECCCCcEEEEE-c-CC
Confidence 5899999999999999877 44566 88888999981 012789999999999 9999999999877654 2 33
Q ss_pred cCcceeEEE-eeecCcc----------------------------------------cCCCc------------EEEEec
Q psy3599 137 KSSKYQVRS-TFCPIMS----------------------------------------FREGA------------CVVTGS 163 (223)
Q Consensus 137 ~~~~~~i~~-~~s~~~~----------------------------------------~~~~~------------~l~sgs 163 (223)
......+.+ +|+|.+. .+++. ++++|+
T Consensus 223 ~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS 302 (356)
T 2w18_A 223 DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAIL 302 (356)
T ss_dssp C---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEE
T ss_pred CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEc
Confidence 221111221 2333110 00122 578999
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEE-EEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVL-GVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~-~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
.|++|++||+.+ ++++.++++|...+. +++|+|+|.+|++|+.|++|+|||+.
T Consensus 303 ~DgTIkIWDl~t---Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 303 TSGTIAIWDLLL---GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TTSCEEEEETTT---CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCCcEEEEECCC---CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 999999999999 999999999987655 58999999999999999999999963
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.87 E-value=1.9e-20 Score=153.32 Aligned_cols=144 Identities=18% Similarity=0.240 Sum_probs=124.6
Q ss_pred cccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEE
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCIL 117 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v 117 (223)
.+|.+.|.++.|+++++++.+. .+..| ...|.+++|+ |++.+|++++.|+ .+
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h-~~~V~~v~~~-------p~~~~l~s~s~D~--~i 216 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH-DHNVSSVSIM-------PNGDHIVSASRDK--TI 216 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCC-SSCEEEEEEC-------SSSSEEEEEETTS--EE
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCC-CCCEEEEEEe-------CCCCEEEEEeCCC--eE
Confidence 3688899999999988776543 23445 7799999999 9999999999999 99
Q ss_pred EEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEE
Q psy3599 118 KVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVS 196 (223)
Q Consensus 118 ~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 196 (223)
++||..++..+.. + .+|... +.+ .++| ++.++++|+.|+.|++||+.+ +++...+.+|...|.+++
T Consensus 217 ~~wd~~~~~~~~~-~-~~h~~~---v~~~~~~~-----~g~~l~s~s~D~~v~vwd~~~---~~~~~~~~~h~~~v~~~~ 283 (410)
T 1vyh_C 217 KMWEVQTGYCVKT-F-TGHREW---VRMVRPNQ-----DGTLIASCSNDQTVRVWVVAT---KECKAELREHRHVVECIS 283 (410)
T ss_dssp EEEETTTCCEEEE-E-ECCSSC---EEEEEECT-----TSSEEEEEETTSCEEEEETTT---CCEEEEECCCSSCEEEEE
T ss_pred EEEECCCCcEEEE-E-eCCCcc---EEEEEECC-----CCCEEEEEcCCCeEEEEECCC---CceeeEecCCCceEEEEE
Confidence 9999999877664 4 488887 555 7888 799999999999999999999 888899999999999999
Q ss_pred EecC--------------------CCEEEEEeCCCcEEEeeCCCCC
Q psy3599 197 FNYD--------------------ESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 197 ~~~~--------------------~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|+|+ +.+|++|+.|+.|++||+++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp ECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred EcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9996 6789999999999999998764
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.87 E-value=3.5e-20 Score=148.01 Aligned_cols=147 Identities=15% Similarity=0.213 Sum_probs=122.6
Q ss_pred ccccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCe
Q psy3599 53 NDQLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAV 114 (223)
Q Consensus 53 ~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~ 114 (223)
..+.+|.+.|.++.|+++++++.+. .+..| ...|.+++|+ |++.+|++++.++
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~-~~~v~~~~~s-------~~~~~l~s~~~d~- 119 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLR-SSWVMTCAYA-------PSGNYVACGGLDN- 119 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECS-SSCEEEEEEC-------TTSSEEEEEETTC-
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecC-CccEEEEEEC-------CCCCEEEEEeCCC-
Confidence 3455899999999999988877554 22344 7789999999 9999999999999
Q ss_pred EEEEEecCCCce---EEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccccc
Q psy3599 115 CILKVLDKEGAV---QLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHAC 190 (223)
Q Consensus 115 ~~v~i~d~~~~~---~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~ 190 (223)
.+++|++.++. .+...+ .+|... +.+ .|++ +..+++++.|+.|++||+.+ ++++..+.+|..
T Consensus 120 -~v~iw~~~~~~~~~~~~~~~-~~h~~~---v~~~~~~~------~~~l~s~s~d~~i~~wd~~~---~~~~~~~~~h~~ 185 (340)
T 1got_B 120 -ICSIYNLKTREGNVRVSREL-AGHTGY---LSCCRFLD------DNQIVTSSGDTTCALWDIET---GQQTTTFTGHTG 185 (340)
T ss_dssp -EEEEEETTTCSBSCEEEEEE-ECCSSC---EEEEEEEE------TTEEEEEETTSCEEEEETTT---TEEEEEECCCSS
T ss_pred -eEEEEECccCCCcceeEEEe-cCCCcc---EEEEEECC------CCcEEEEECCCcEEEEECCC---CcEEEEEcCCCC
Confidence 89999987642 233334 388877 555 7887 44589999999999999999 888999999999
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 191 PVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 191 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.|.+++|+|++.++++|+.|+.|++||+++++
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 99999999999999999999999999998764
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.86 E-value=2.8e-20 Score=147.40 Aligned_cols=149 Identities=14% Similarity=0.253 Sum_probs=121.3
Q ss_pred ccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 55 QLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+.+|.+.|..+.|+++++++.+. .+..| ...|.+++|+ +++.+|++++.|+ .
T Consensus 61 ~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h-~~~v~~~~~~-------~~~~~l~s~s~D~--~ 130 (319)
T 3frx_A 61 FKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGH-KSDVMSVDID-------KKASMIISGSRDK--T 130 (319)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEC-------TTSCEEEEEETTS--C
T ss_pred EeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccC-CCcEEEEEEc-------CCCCEEEEEeCCC--e
Confidence 44788889989998887766443 34456 8899999999 9999999999999 8
Q ss_pred EEEecCCCceEEeeeeeccccCcceeEEE-eeecCccc-CCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEE
Q psy3599 117 LKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSF-REGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLG 194 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~-~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 194 (223)
+++||.... .+.. + .+|... +.+ .|.|.... .++..+++|+.|+.|++||+++ .++...+.+|...|.+
T Consensus 131 i~vwd~~~~-~~~~-~-~~h~~~---v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~---~~~~~~~~~h~~~v~~ 201 (319)
T 3frx_A 131 IKVWTIKGQ-CLAT-L-LGHNDW---VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ---FQIEADFIGHNSNINT 201 (319)
T ss_dssp EEEEETTSC-EEEE-E-CCCSSC---EEEEEECCC------CCEEEEEETTSCEEEEETTT---TEEEEEECCCCSCEEE
T ss_pred EEEEECCCC-eEEE-E-eccCCc---EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc---chhheeecCCCCcEEE
Confidence 999999754 4443 3 488877 444 77773211 1355899999999999999999 8888899999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 195 VSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 195 v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++|+|++.+|++|+.||.|++||+++++
T Consensus 202 ~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 202 LTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp EEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999999999998754
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.86 E-value=2e-20 Score=149.81 Aligned_cols=141 Identities=14% Similarity=0.245 Sum_probs=116.8
Q ss_pred ccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+|.+.|.+++|+|+|+++.+. .+..| ..+|.+++|+ |++.+|++++.|+ .
T Consensus 59 ~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h-~~~v~~v~~s-------p~~~~l~s~s~D~--~ 128 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGH-ENEVKSVAWA-------PSGNLLATCSRDK--S 128 (345)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS--C
T ss_pred ccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCC-CCCceEEEEe-------CCCCEEEEEECCC--e
Confidence 678889999998887766443 23345 7899999999 9999999999999 8
Q ss_pred EEEecCCCceE--EeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccc--ccceeecccccC
Q psy3599 117 LKVLDKEGAVQ--LKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHK--NAVNKLQGHACP 191 (223)
Q Consensus 117 v~i~d~~~~~~--~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~--~~~~~~~~h~~~ 191 (223)
+++||+.++.. ....+ .+|... +.+ .|+| ++.+|++|+.|+.|++||.+. + .+...+.+|...
T Consensus 129 v~iwd~~~~~~~~~~~~~-~~h~~~---v~~~~~~p-----~~~~l~s~s~d~~i~~w~~~~---~~~~~~~~~~~h~~~ 196 (345)
T 3fm0_A 129 VWVWEVDEEDEYECVSVL-NSHTQD---VKHVVWHP-----SQELLASASYDDTVKLYREEE---DDWVCCATLEGHEST 196 (345)
T ss_dssp EEEEEECTTSCEEEEEEE-CCCCSC---EEEEEECS-----SSSCEEEEETTSCEEEEEEET---TEEEEEEEECCCSSC
T ss_pred EEEEECCCCCCeEEEEEe-cCcCCC---eEEEEECC-----CCCEEEEEeCCCcEEEEEecC---CCEEEEEEecCCCCc
Confidence 99999875532 22233 478777 555 8999 799999999999999999987 4 356788999999
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 192 VLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 192 v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
|.+++|+|++.+|++++.|++|++||..
T Consensus 197 v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 197 VWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 9999999999999999999999999964
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.86 E-value=2.3e-20 Score=150.07 Aligned_cols=143 Identities=15% Similarity=0.203 Sum_probs=118.5
Q ss_pred cCCcEEEEEECCCCceeeee------------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCC
Q psy3599 58 STGVIVSILCDDLGRLSKGK------------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANA 113 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~------------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~ 113 (223)
+...|.++.|+|+|..+.+. .+..| ...|.++.|+ +++..|++++.|+
T Consensus 105 ~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~-------~~~~~l~t~s~D~ 176 (354)
T 2pbi_B 105 PCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMH-TNYLSACSFT-------NSDMQILTASGDG 176 (354)
T ss_dssp SSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEEC-SSCEEEEEEC-------SSSSEEEEEETTS
T ss_pred CCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeecc-CCcEEEEEEe-------CCCCEEEEEeCCC
Confidence 44556677777777665432 23345 7889999999 8999999999999
Q ss_pred eEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCE
Q psy3599 114 VCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPV 192 (223)
Q Consensus 114 ~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v 192 (223)
.+++||+.++..+.. + .+|... +.+ .|+|.. ++.++++|+.||.|++||+++ ++++..+.+|...|
T Consensus 177 --~v~lwd~~~~~~~~~-~-~~h~~~---v~~~~~~~~~---~g~~l~sgs~Dg~v~~wd~~~---~~~~~~~~~h~~~v 243 (354)
T 2pbi_B 177 --TCALWDVESGQLLQS-F-HGHGAD---VLCLDLAPSE---TGNTFVSGGCDKKAMVWDMRS---GQCVQAFETHESDV 243 (354)
T ss_dssp --EEEEEETTTCCEEEE-E-ECCSSC---EEEEEECCCS---SCCEEEEEETTSCEEEEETTT---CCEEEEECCCSSCE
T ss_pred --cEEEEeCCCCeEEEE-E-cCCCCC---eEEEEEEeCC---CCCEEEEEeCCCeEEEEECCC---CcEEEEecCCCCCe
Confidence 999999998876654 4 488887 544 676621 468999999999999999999 88999999999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 193 LGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 193 ~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.+++|+|++..|++|+.|++|++||++.+
T Consensus 244 ~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 244 NSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 99999999999999999999999999864
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.86 E-value=3.4e-20 Score=147.60 Aligned_cols=143 Identities=15% Similarity=0.200 Sum_probs=112.6
Q ss_pred cCCcEEEEEECCCCceeeee-------------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCC
Q psy3599 58 STGVIVSILCDDLGRLSKGK-------------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAAN 112 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~-------------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~ 112 (223)
|.+.|.+++|+|+++++.+. .+..| ...|.+++|+ |++.+|++++.|
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~s-------p~g~~las~s~D 128 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH-ENEVKGVAWS-------NDGYYLATCSRD 128 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEEC-------TTSCEEEEEETT
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC-CCcEEEEEEC-------CCCCEEEEEeCC
Confidence 77788888888877665432 12345 7899999999 999999999999
Q ss_pred CeEEEEEecCCCc-e--EEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccc
Q psy3599 113 AVCILKVLDKEGA-V--QLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGH 188 (223)
Q Consensus 113 ~~~~v~i~d~~~~-~--~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h 188 (223)
+ .+++||.... . .....+ .+|... +.+ .|+| ++.+|++|+.|+.|++||... ...+++..+.+|
T Consensus 129 ~--~v~iwd~~~~~~~~~~~~~~-~~h~~~---v~~v~~~p-----~~~~l~s~s~D~~i~iW~~~~-~~~~~~~~~~~h 196 (330)
T 2hes_X 129 K--SVWIWETDESGEEYECISVL-QEHSQD---VKHVIWHP-----SEALLASSSYDDTVRIWKDYD-DDWECVAVLNGH 196 (330)
T ss_dssp S--CEEEEECCTTCCCCEEEEEE-CCCSSC---EEEEEECS-----SSSEEEEEETTSCEEEEEEET-TEEEEEEEECCC
T ss_pred C--EEEEEeccCCCCCeEEEEEe-ccCCCc---eEEEEECC-----CCCEEEEEcCCCeEEEEECCC-CCeeEEEEccCC
Confidence 9 8999998422 1 222234 488887 555 8999 799999999999999999886 112678899999
Q ss_pred ccCEEEEEEecC--CCEEEEEeCCCcEEEeeCCC
Q psy3599 189 ACPVLGVSFNYD--ESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 189 ~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd~~~ 220 (223)
...|.+++|+|+ +..|++|+.|++|++||++.
T Consensus 197 ~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 197 EGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 999999999998 67899999999999999864
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.86 E-value=3e-20 Score=148.75 Aligned_cols=146 Identities=18% Similarity=0.271 Sum_probs=116.1
Q ss_pred ccCC-cEEEEEECCCCceeeee--------------------ee-eecCCCCeeEEEEeecccccCCCCeEEEEEeCCCe
Q psy3599 57 RSTG-VIVSILCDDLGRLSKGK--------------------RL-VLSQDCPITCLSWRSWISREARDPTLLVNIAANAV 114 (223)
Q Consensus 57 ~~~~-~i~~~~~~~~~~~~~~~--------------------~~-~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~ 114 (223)
+|.+ .|..++|+|+|+++.+. .+ ..| ...|.+++|+ |++.+|++++.|+
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h-~~~v~~~~~s-------p~g~~l~s~s~D~- 83 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGH-QRTVRKVAWS-------PCGNYLASASFDA- 83 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSC-SSCEEEEEEC-------TTSSEEEEEETTS-
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeecccc-CCcEEEEEEC-------CCCCEEEEEECCC-
Confidence 4554 77777888777665443 11 234 7899999999 9999999999999
Q ss_pred EEEEEecCCCceE-EeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCE
Q psy3599 115 CILKVLDKEGAVQ-LKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPV 192 (223)
Q Consensus 115 ~~v~i~d~~~~~~-~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v 192 (223)
.+++|+...+.. ....+ .+|... +.+ +|+| ++.+|++|+.|+.|++||+......+++..+.+|...|
T Consensus 84 -~v~iw~~~~~~~~~~~~~-~~h~~~---v~~v~~sp-----~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v 153 (345)
T 3fm0_A 84 -TTCIWKKNQDDFECVTTL-EGHENE---VKSVAWAP-----SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV 153 (345)
T ss_dssp -CEEEEEECCC-EEEEEEE-CCCSSC---EEEEEECT-----TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE
T ss_pred -cEEEEEccCCCeEEEEEc-cCCCCC---ceEEEEeC-----CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe
Confidence 899999876532 22334 488888 555 8999 79999999999999999998721124567788999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 193 LGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 193 ~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.+++|+|++.+|++++.|+.|++||.+.+
T Consensus 154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~~~ 182 (345)
T 3fm0_A 154 KHVVWHPSQELLASASYDDTVKLYREEED 182 (345)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEEEETT
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEecCC
Confidence 99999999999999999999999998754
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.86 E-value=3.9e-20 Score=158.73 Aligned_cols=144 Identities=13% Similarity=0.230 Sum_probs=122.1
Q ss_pred cccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCe-EEEEEeCCCe
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPT-LLVNIAANAV 114 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~-~l~~~~~~~~ 114 (223)
.+|.+.|.+++|+|+|+.+... .+..| ...|.+++|+ |++. .|++++.|+
T Consensus 100 ~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh-~~~v~~v~f~-------p~~~~~l~s~s~D~- 170 (611)
T 1nr0_A 100 PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ-ARAMNSVDFK-------PSRPFRIISGSDDN- 170 (611)
T ss_dssp ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCC-SSCEEEEEEC-------SSSSCEEEEEETTS-
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCC-CCCceEEEEC-------CCCCeEEEEEeCCC-
Confidence 3678899999999988876432 23455 7899999999 7775 699999999
Q ss_pred EEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeec-------
Q psy3599 115 CILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQ------- 186 (223)
Q Consensus 115 ~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~------- 186 (223)
.+++||..+++.+. .+ .+|... +.+ +|+| ++.+|++|+.|+.|++||..+ ++++..+.
T Consensus 171 -~v~lwd~~~~~~~~-~l-~~H~~~---V~~v~fsp-----dg~~las~s~D~~i~lwd~~~---g~~~~~~~~~~~~~~ 236 (611)
T 1nr0_A 171 -TVAIFEGPPFKFKS-TF-GEHTKF---VHSVRYNP-----DGSLFASTGGDGTIVLYNGVD---GTKTGVFEDDSLKNV 236 (611)
T ss_dssp -CEEEEETTTBEEEE-EE-CCCSSC---EEEEEECT-----TSSEEEEEETTSCEEEEETTT---CCEEEECBCTTSSSC
T ss_pred -eEEEEECCCCeEee-ee-ccccCc---eEEEEECC-----CCCEEEEEECCCcEEEEECCC---CcEeeeecccccccc
Confidence 89999998876655 44 489888 665 8999 799999999999999999998 77777763
Q ss_pred ccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 187 GHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 187 ~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|...|.+++|+|++.+|++++.|++|++||+++++
T Consensus 237 ~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 237 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 799999999999999999999999999999998753
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.86 E-value=2.3e-20 Score=150.19 Aligned_cols=146 Identities=12% Similarity=0.203 Sum_probs=119.3
Q ss_pred ccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCC-eEEEEEeCCCeEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDP-TLLVNIAANAVCIL 117 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~-~~l~~~~~~~~~~v 117 (223)
+|.+.|.++.|+|+++.+.+. .+..| ...|++++|+ +++ .++++++.|+ .+
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h-~~~v~~v~~s-------~~~~~~~~s~~~dg--~v 206 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH-SSEVNCVAAC-------PGKDTIFLSCGEDG--RI 206 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEC-------TTCSSCEEEEETTS--CE
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEEEEEc-------cCCCceeeeeccCC--ce
Confidence 678899999999988876543 33455 7899999999 665 4788888888 89
Q ss_pred EEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEE
Q psy3599 118 KVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVS 196 (223)
Q Consensus 118 ~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 196 (223)
++||+.++..+.......|... +.+ +|+|. ++.++++|+.|+.|++||+++ ++++..+.+|...|.+++
T Consensus 207 ~~wd~~~~~~~~~~~~~~~~~~---v~~v~~sp~----~~~~la~g~~d~~i~~wd~~~---~~~~~~~~~~~~~v~~l~ 276 (357)
T 4g56_B 207 LLWDTRKPKPATRIDFCASDTI---PTSVTWHPE----KDDTFACGDETGNVSLVNIKN---PDSAQTSAVHSQNITGLA 276 (357)
T ss_dssp EECCTTSSSCBCBCCCTTCCSC---EEEEEECTT----STTEEEEEESSSCEEEEESSC---GGGCEEECCCSSCEEEEE
T ss_pred EEEECCCCceeeeeeecccccc---ccchhhhhc----ccceEEEeecccceeEEECCC---CcEeEEEeccceeEEEEE
Confidence 9999988765543221234444 555 89995 467999999999999999999 899999999999999999
Q ss_pred EecCC-CEEEEEeCCCcEEEeeCCCCC
Q psy3599 197 FNYDE-SLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 197 ~~~~~-~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|+|++ .+|++|+.|++|+|||+++++
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99986 579999999999999998764
No 21
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.86 E-value=4.3e-20 Score=148.64 Aligned_cols=145 Identities=19% Similarity=0.279 Sum_probs=112.6
Q ss_pred ccCCcEEEEEECCCCceeeeee----------------------------eeecCCCCeeEEEEeecccccCCCCeEEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGKR----------------------------LVLSQDCPITCLSWRSWISREARDPTLLVN 108 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~~----------------------------~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~ 108 (223)
.|.+.|.+++|+|+|+++.+.. ...| ...|.+++|+ +++.+|++
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~s-------~d~~~l~~ 111 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT-EAGVTDVAWV-------SEKGILVA 111 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC-SSCEEEEEEE-------TTTEEEEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC-CCCEEEEEEc-------CCCCEEEE
Confidence 5889999999999998886541 1123 6679999999 88876654
Q ss_pred EeCCCeEEEEEecCCCceEEee--eeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceee
Q psy3599 109 IAANAVCILKVLDKEGAVQLKR--KFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKL 185 (223)
Q Consensus 109 ~~~~~~~~v~i~d~~~~~~~~~--~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~ 185 (223)
+.++ .|++||+.++..+.. ....+|... +.+ +|+| ++.+|++|+.|+.|++||+++ ++++..+
T Consensus 112 -s~dg--~v~lWd~~~~~~~~~~~~~~~~h~~~---V~~v~~sp-----dg~~l~sgs~dg~v~iwd~~~---~~~~~~~ 177 (357)
T 4g56_B 112 -SDSG--AVELWEILEKESLLVNKFAKYEHDDI---VKTLSVFS-----DGTQAVSGGKDFSVKVWDLSQ---KAVLKSY 177 (357)
T ss_dssp -ETTS--CEEEC--------CCCCEEECCCSSC---EEEEEECS-----SSSEEEEEETTSCEEEEETTT---TEEEEEE
T ss_pred -ECCC--EEEEeeccccceeEEEeeccCCCCCC---EEEEEECC-----CCCEEEEEeCCCeEEEEECCC---CcEEEEE
Confidence 5566 799999887654321 111377777 666 8999 799999999999999999999 8999999
Q ss_pred cccccCEEEEEEecCC-CEEEEEeCCCcEEEeeCCCCCC
Q psy3599 186 QGHACPVLGVSFNYDE-SLLATSDYQGLIILWSREKHEP 223 (223)
Q Consensus 186 ~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~~ 223 (223)
++|...|.+++|+|++ .++++++.|++|++||++++++
T Consensus 178 ~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 178 NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC
T ss_pred cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce
Confidence 9999999999999986 4789999999999999988753
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.85 E-value=1.4e-19 Score=143.31 Aligned_cols=144 Identities=17% Similarity=0.210 Sum_probs=118.0
Q ss_pred cccccCCcEEEEEECCCC-ceeeee-----------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEE
Q psy3599 54 DQLRSTGVIVSILCDDLG-RLSKGK-----------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNI 109 (223)
Q Consensus 54 ~~~~~~~~i~~~~~~~~~-~~~~~~-----------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~ 109 (223)
.+.+|.+.|.++.+++++ +++.+. .+..| ...|.+++|+ +++.+|+++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-~~~v~~~~~s-------~dg~~l~s~ 83 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGH-SHIVQDCTLT-------ADGAYALSA 83 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECC-SSCEEEEEEC-------TTSSEEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCC-cccEEEEEEC-------CCCCEEEEE
Confidence 344677778777777632 333221 24456 8899999999 999999999
Q ss_pred eCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccc
Q psy3599 110 AANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGH 188 (223)
Q Consensus 110 ~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h 188 (223)
+.|+ .+++||+.++..+.. + .+|... +.+ .|+| ++.++++|+.|+.|++||++. .++..+.+|
T Consensus 84 s~D~--~v~~wd~~~~~~~~~-~-~~h~~~---v~~~~~~~-----~~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h 147 (319)
T 3frx_A 84 SWDK--TLRLWDVATGETYQR-F-VGHKSD---VMSVDIDK-----KASMIISGSRDKTIKVWTIKG----QCLATLLGH 147 (319)
T ss_dssp ETTS--EEEEEETTTTEEEEE-E-ECCSSC---EEEEEECT-----TSCEEEEEETTSCEEEEETTS----CEEEEECCC
T ss_pred eCCC--EEEEEECCCCCeeEE-E-ccCCCc---EEEEEEcC-----CCCEEEEEeCCCeEEEEECCC----CeEEEEecc
Confidence 9999 999999999877664 4 489888 555 8999 799999999999999999975 567888899
Q ss_pred ccCEEEEEEecC------CCEEEEEeCCCcEEEeeCCCC
Q psy3599 189 ACPVLGVSFNYD------ESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 189 ~~~v~~v~~~~~------~~~l~s~s~d~~i~iwd~~~~ 221 (223)
...|.++.|+|. +..+++++.|+.|++||+++.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 186 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF 186 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence 999999999985 448999999999999999864
No 23
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.84 E-value=1.9e-19 Score=141.14 Aligned_cols=148 Identities=17% Similarity=0.226 Sum_probs=113.2
Q ss_pred ccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+|.+.|.+++|+++|+.+.+. .+..| ..+|.+++|++. .++.+|++++.|+ .
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH-~~~V~~v~~s~~-----~~g~~l~s~s~D~--~ 78 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHP-----KFGTILASCSYDG--K 78 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC-SSCEEEEEECCG-----GGCSEEEEEETTT--E
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc-cCCeEEEEecCC-----CcCCEEEEEcCCC--E
Confidence 577777777777777665433 33455 789999999810 2488999999999 9
Q ss_pred EEEecCCCceE-EeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccc--cceeecccccCE
Q psy3599 117 LKVLDKEGAVQ-LKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKN--AVNKLQGHACPV 192 (223)
Q Consensus 117 v~i~d~~~~~~-~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~--~~~~~~~h~~~v 192 (223)
+++||..++.. ....+ .+|... +.+ .|+|.. .+.+|++|+.|+.|++||++. .. ....+.+|...|
T Consensus 79 v~iWd~~~~~~~~~~~~-~~h~~~---v~~v~~~p~~---~g~~l~s~s~d~~v~~wd~~~---~~~~~~~~~~~h~~~v 148 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVH-AVHSAS---VNSVQWAPHE---YGPMLLVASSDGKVSVVEFKE---NGTTSPIIIDAHAIGV 148 (297)
T ss_dssp EEEEEBSSSCBCCCEEE-CCCSSC---EEEEEECCGG---GCSEEEEEETTSEEEEEEBCS---SSCBCCEEEECCSSCE
T ss_pred EEEEEcCCCceEEEEEe-ecCCCc---eeEEEeCcCC---CCcEEEEEECCCcEEEEEecC---CCceeeeeeecccCcc
Confidence 99999987632 11223 377777 665 899820 178999999999999999987 42 245678899999
Q ss_pred EEEEEecC-------------CCEEEEEeCCCcEEEeeCCCCC
Q psy3599 193 LGVSFNYD-------------ESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 193 ~~v~~~~~-------------~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+++|+|+ +.+|++|+.|++|++||+++++
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEETTT
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 99999997 4699999999999999987643
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.84 E-value=2.6e-19 Score=145.71 Aligned_cols=139 Identities=19% Similarity=0.242 Sum_probs=113.5
Q ss_pred CcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEec
Q psy3599 60 GVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLD 121 (223)
Q Consensus 60 ~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d 121 (223)
..|.++.|+|+|+++.+. .+..| ...|.+++|+ +++.+|++++.|+ .+++||
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~-------p~~~~l~s~s~d~--~v~iwd 193 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGH-EQDIYSLDYF-------PSGDKLVSGSGDR--TVRIWD 193 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS--EEEEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccC-CCCEEEEEEc-------CCCCEEEEecCCC--cEEEEE
Confidence 358888888888766543 33455 7899999999 9999999999999 999999
Q ss_pred CCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceee-------cccccCEE
Q psy3599 122 KEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKL-------QGHACPVL 193 (223)
Q Consensus 122 ~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-------~~h~~~v~ 193 (223)
+.++..... ..+... +.+ .|+|. ++.++++|+.|+.|++||+++ +.++..+ .+|...|.
T Consensus 194 ~~~~~~~~~---~~~~~~---v~~~~~~~~----~~~~l~~~s~d~~v~iwd~~~---~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 194 LRTGQCSLT---LSIEDG---VTTVAVSPG----DGKYIAAGSLDRAVRVWDSET---GFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp TTTTEEEEE---EECSSC---EEEEEECST----TCCEEEEEETTSCEEEEETTT---CCEEEEEC------CCCSSCEE
T ss_pred CCCCeeEEE---EEcCCC---cEEEEEECC----CCCEEEEEcCCCcEEEEECCC---CcEEEeecccccCCCCCCCCEE
Confidence 998876654 244444 444 78885 689999999999999999998 7766655 57999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 194 GVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 194 ~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
+++|+|++.+|++|+.|+.|++||+++.
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 9999999999999999999999998753
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.84 E-value=9.4e-20 Score=147.70 Aligned_cols=159 Identities=14% Similarity=0.131 Sum_probs=111.6
Q ss_pred ccccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeeccc-----------------
Q psy3599 53 NDQLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWIS----------------- 97 (223)
Q Consensus 53 ~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~----------------- 97 (223)
..+.+|.+.|.++.|+|+++++.+. .+..| ...|.+++|+|...
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h-~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLH-CPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECC-CTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecC-CCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 3455899999999999988776543 23334 55667777761000
Q ss_pred --------------------------ccCCCCeEEEEEeCCCeEEEEEecCCCceEEeee---eeccccCcceeEEEeee
Q psy3599 98 --------------------------REARDPTLLVNIAANAVCILKVLDKEGAVQLKRK---FNVNHKSSKYQVRSTFC 148 (223)
Q Consensus 98 --------------------------~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~---~~~~h~~~~~~i~~~~s 148 (223)
..|.++..|++++.|+ .+++||+.++..+... +..+|...+ ....|+
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~--~i~~wd~~~~~~~~~~~~~~~~~h~~~v--~~~~~~ 214 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQ--TCVLWDVTTGQRISIFGSEFPSGHTADV--LSLSIN 214 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTS--CEEEECTTTCCEEEEECCCSSSSCCSCE--EEEEEC
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCC--cEEEEEcCCCcEEEEeecccCCCCccCe--EEEEee
Confidence 0011233455555555 5666666665544321 112566553 233676
Q ss_pred cCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 149 PIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 149 ~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+. ++.++++|+.|+.|++||++.. .+++..+.+|...|.+++|+|++.+|++|+.|++|++||+++++
T Consensus 215 ~~----~~~~l~sgs~D~~v~~wd~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 215 SL----NANMFISGSCDTTVRLWDLRIT--SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp SS----SCCEEEEEETTSCEEEEETTTT--CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred cC----CCCEEEEEECCCeEEEEECCCC--CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 54 6899999999999999999841 57788899999999999999999999999999999999998753
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.84 E-value=3e-19 Score=142.73 Aligned_cols=149 Identities=13% Similarity=0.172 Sum_probs=115.8
Q ss_pred ccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 55 QLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+.+|.+.|.++.+++++.++.+. .+..| ...|.+++|+ |++.+|++++.|+ .
T Consensus 72 l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h-~~~v~~v~~s-------p~~~~l~s~~~d~--~ 141 (343)
T 2xzm_R 72 LTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH-QSEVYSVAFS-------PDNRQILSAGAER--E 141 (343)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC-CSCEEEEEEC-------SSTTEEEEEETTS--C
T ss_pred hccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC-CCcEEEEEEC-------CCCCEEEEEcCCC--E
Confidence 44788889999999877765433 34456 8899999999 9999999999999 8
Q ss_pred EEEecCCCceEEeeeeeccccCcceeEEE-eeecCccc-----CCCcEEEEecCCCcEEEEEcccCcccccceeeccccc
Q psy3599 117 LKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSF-----REGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHAC 190 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~-----~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~ 190 (223)
+++||.............+|... +.+ .|+|.... ..+.++++|+.|+.|++||.. ......+.+|..
T Consensus 142 i~~wd~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~h~~ 214 (343)
T 2xzm_R 142 IKLWNILGECKFSSAEKENHSDW---VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----FQIRYTFKAHES 214 (343)
T ss_dssp EEEEESSSCEEEECCTTTSCSSC---EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT----TEEEEEEECCSS
T ss_pred EEEEeccCCceeeeecccCCCce---eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC----CceeEEEcCccc
Confidence 99999875432221111256666 555 88884210 013799999999999999943 466778889999
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 191 PVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 191 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
.|.+++|+|++.+|++|+.|+.|++||++.
T Consensus 215 ~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 215 NVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred cceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999999999999999999853
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.84 E-value=1.2e-19 Score=153.91 Aligned_cols=137 Identities=19% Similarity=0.369 Sum_probs=116.7
Q ss_pred cccCCcEEEEEECCCCceeeee-----------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEE
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK-----------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILK 118 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 118 (223)
.+|.+.|..+.|+|+++.+.+. .+..| ..+|.+++|+ |++.+|++++.++ .++
T Consensus 423 ~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~-~~~v~~~~~s-------pd~~~las~~~d~--~i~ 492 (577)
T 2ymu_A 423 TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGH-SSSVRGVAFS-------PDGQTIASASDDK--TVK 492 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECC-SSCEEEEEEC-------TTSCEEEEEETTS--EEE
T ss_pred cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCC-CCCEEEEEEc-------CCCCEEEEEeCCC--EEE
Confidence 3677889999999987766443 33445 7899999999 9999999999999 899
Q ss_pred EecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEE
Q psy3599 119 VLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSF 197 (223)
Q Consensus 119 i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 197 (223)
+||.. +..+. .+ .+|... +.+ +|+| ++.+|++++.||.|++||. + ++++..+.+|...|++++|
T Consensus 493 iw~~~-~~~~~-~~-~~h~~~---v~~l~~s~-----dg~~l~s~~~dg~v~lwd~-~---~~~~~~~~~h~~~v~~~~f 557 (577)
T 2ymu_A 493 LWNRN-GQLLQ-TL-TGHSSS---VRGVAFSP-----DGQTIASASDDKTVKLWNR-N---GQLLQTLTGHSSSVWGVAF 557 (577)
T ss_dssp EEETT-SCEEE-EE-ECCSSC---EEEEEECT-----TSSCEEEEETTSEEEEECT-T---SCEEEEEECCSSCEEEEEE
T ss_pred EEcCC-CCEEE-EE-eCCCCC---EEEEEEcC-----CCCEEEEEECcCEEEEEeC-C---CCEEEEEcCCCCCEEEEEE
Confidence 99965 44454 34 489888 555 8999 7999999999999999995 4 6788999999999999999
Q ss_pred ecCCCEEEEEeCCCcEEEee
Q psy3599 198 NYDESLLATSDYQGLIILWS 217 (223)
Q Consensus 198 ~~~~~~l~s~s~d~~i~iwd 217 (223)
+|++.+|+|++.|++|++||
T Consensus 558 s~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 558 SPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CTTSSCEEEEETTSCEEEEC
T ss_pred cCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999997
No 28
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.84 E-value=2.4e-19 Score=144.11 Aligned_cols=141 Identities=11% Similarity=0.185 Sum_probs=113.5
Q ss_pred cccCCcEEEEEECC--CCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeE
Q psy3599 56 LRSTGVIVSILCDD--LGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVC 115 (223)
Q Consensus 56 ~~~~~~i~~~~~~~--~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (223)
.+|.+.|.++.+.+ +|..+.+. .+..| ...|.+++|+ |++.+|++++.|+
T Consensus 193 ~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~-------p~~~~l~s~s~D~-- 262 (354)
T 2pbi_B 193 HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH-ESDVNSVRYY-------PSGDAFASGSDDA-- 262 (354)
T ss_dssp ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS--
T ss_pred cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CCCeEEEEEe-------CCCCEEEEEeCCC--
Confidence 35777777777766 34444332 33445 7899999999 9999999999999
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEE
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLG 194 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 194 (223)
.+++||+..+..+... . .+.. ...+.+ .|+| ++.++++|+.|+.|++||+.+ ++.+..+.+|...|.+
T Consensus 263 ~v~lwd~~~~~~~~~~-~-~~~~-~~~~~~~~~s~-----~g~~l~~g~~d~~i~vwd~~~---~~~~~~l~~h~~~v~~ 331 (354)
T 2pbi_B 263 TCRLYDLRADREVAIY-S-KESI-IFGASSVDFSL-----SGRLLFAGYNDYTINVWDVLK---GSRVSILFGHENRVST 331 (354)
T ss_dssp CEEEEETTTTEEEEEE-C-CTTC-CSCEEEEEECT-----TSSEEEEEETTSCEEEEETTT---CSEEEEECCCSSCEEE
T ss_pred eEEEEECCCCcEEEEE-c-CCCc-ccceeEEEEeC-----CCCEEEEEECCCcEEEEECCC---CceEEEEECCCCcEEE
Confidence 8999999887655432 1 2221 111555 8999 799999999999999999998 8888999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEee
Q psy3599 195 VSFNYDESLLATSDYQGLIILWS 217 (223)
Q Consensus 195 v~~~~~~~~l~s~s~d~~i~iwd 217 (223)
++|+|++.+|++|+.|++|++|+
T Consensus 332 l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 332 LRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECTTSSCEEEEETTSEEEEEC
T ss_pred EEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999996
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.84 E-value=1.8e-19 Score=146.08 Aligned_cols=146 Identities=16% Similarity=0.194 Sum_probs=114.0
Q ss_pred ccCCcEEEEEECC-CCceeeee-------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 57 RSTGVIVSILCDD-LGRLSKGK-------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 57 ~~~~~i~~~~~~~-~~~~~~~~-------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+|...|.++.+++ ++.++.+. .+..| ...|.+++|+ |++.+|++++.|+ .
T Consensus 203 ~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h-~~~v~~v~~~-------p~~~~l~s~s~D~--~ 272 (380)
T 3iz6_a 203 GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH-EGDINSVKFF-------PDGQRFGTGSDDG--T 272 (380)
T ss_dssp SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC-SSCCCEEEEC-------TTSSEEEEECSSS--C
T ss_pred CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc-CCCeEEEEEe-------cCCCeEEEEcCCC--e
Confidence 4566677777765 44443222 23445 7899999999 9999999999999 8
Q ss_pred EEEecCCCceEEeeeeeccccCc----ceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceee----cc
Q psy3599 117 LKVLDKEGAVQLKRKFNVNHKSS----KYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKL----QG 187 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~~~~h~~~----~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~----~~ 187 (223)
+++||+.++..+... . .+... ...+.+ +|+| ++.++++|+.||.|++||... ++.+..+ .+
T Consensus 273 i~lwd~~~~~~~~~~-~-~~~~~~~~~~~~v~~~~~s~-----~g~~l~~g~~dg~i~vwd~~~---~~~~~~~~~~~~~ 342 (380)
T 3iz6_a 273 CRLFDMRTGHQLQVY-N-REPDRNDNELPIVTSVAFSI-----SGRLLFAGYSNGDCYVWDTLL---AEMVLNLGTLQNS 342 (380)
T ss_dssp EEEEETTTTEEEEEE-C-CCCSSSCCSSCSCSEEEECS-----SSSEEEEECTTSCEEEEETTT---CCEEEEECCSCSS
T ss_pred EEEEECCCCcEEEEe-c-ccccccccccCceEEEEECC-----CCCEEEEEECCCCEEEEECCC---CceEEEEecccCC
Confidence 999999988766543 1 22111 011444 8999 799999999999999999988 7766665 67
Q ss_pred cccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 188 HACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 188 h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|...|.+++|+|++.+|+||+.|++|++|++...+
T Consensus 343 h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 343 HEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999999999999999999999999998653
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.84 E-value=2.8e-19 Score=140.22 Aligned_cols=150 Identities=17% Similarity=0.256 Sum_probs=111.8
Q ss_pred ccccCCcEEEEEECC--CCceeeee--------------------eeeecCCCCeeEEEEeecccccCCC--CeEEEEEe
Q psy3599 55 QLRSTGVIVSILCDD--LGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARD--PTLLVNIA 110 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~--~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~--~~~l~~~~ 110 (223)
+.+|.+.|.++.|++ +++++.+. .+..| ...|.+++|+ |+ +.+|++++
T Consensus 49 l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~-------p~~~g~~l~s~s 120 (297)
T 2pm7_B 49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH-SASVNSVQWA-------PHEYGPMLLVAS 120 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC-SSCEEEEEEC-------CGGGCSEEEEEE
T ss_pred EccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC-CCceeEEEeC-------cCCCCcEEEEEE
Confidence 346777777777764 24444322 12234 7789999999 65 78999999
Q ss_pred CCCeEEEEEecCCCceEE-eeeeeccccCcceeEEE-eeecCcc--------cCCCcEEEEecCCCcEEEEEcccCcccc
Q psy3599 111 ANAVCILKVLDKEGAVQL-KRKFNVNHKSSKYQVRS-TFCPIMS--------FREGACVVTGSEDSCVYFLDIQSKEHKN 180 (223)
Q Consensus 111 ~~~~~~v~i~d~~~~~~~-~~~~~~~h~~~~~~i~~-~~s~~~~--------~~~~~~l~sgs~dg~v~iwd~~~~~~~~ 180 (223)
.|+ .+++||+.++... ...+ .+|... +.+ .|+|... ..++.+|++|+.|+.|++||+++ ++
T Consensus 121 ~d~--~v~~wd~~~~~~~~~~~~-~~h~~~---v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~---~~ 191 (297)
T 2pm7_B 121 SDG--KVSVVEFKENGTTSPIII-DAHAIG---VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS---DA 191 (297)
T ss_dssp TTS--EEEEEEBCSSSCBCCEEE-ECCSSC---EEEEEECCCC------------CCEEEEEETTSCEEEEEEET---TT
T ss_pred CCC--cEEEEEecCCCceeeeee-ecccCc---cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC---CC
Confidence 999 8999998765321 2233 488877 555 8988310 00256999999999999999987 44
Q ss_pred ----cceeecccccCEEEEEEecCC---CEEEEEeCCCcEEEeeCCCC
Q psy3599 181 ----AVNKLQGHACPVLGVSFNYDE---SLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 181 ----~~~~~~~h~~~v~~v~~~~~~---~~l~s~s~d~~i~iwd~~~~ 221 (223)
+...+.+|...|.+++|+|++ .+|++++.|++|++||++++
T Consensus 192 ~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 192 QTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 567889999999999999984 79999999999999998763
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.84 E-value=2.4e-19 Score=153.80 Aligned_cols=147 Identities=14% Similarity=0.175 Sum_probs=119.0
Q ss_pred ccccCCcEEEEEECCCCce-eeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeE
Q psy3599 55 QLRSTGVIVSILCDDLGRL-SKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVC 115 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~-~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (223)
+.+|.+.|.++.|+|++.. +.+. .+..| ...|.+++|+ |++.+|++++.|+
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H-~~~V~~v~fs-------pdg~~las~s~D~-- 212 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH-TKFVHSVRYN-------PDGSLFASTGGDG-- 212 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS--
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc-cCceEEEEEC-------CCCCEEEEEECCC--
Confidence 3478889999999997652 3221 34456 7899999999 9999999999999
Q ss_pred EEEEecCCCceEEeeeee-----ccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccc-------
Q psy3599 116 ILKVLDKEGAVQLKRKFN-----VNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAV------- 182 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~-----~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~------- 182 (223)
.+++||..++..+..... .+|... +.+ +|+| ++.+|++|+.|+.|++||+.+ ++++
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~---V~~v~~sp-----dg~~l~s~s~D~~v~lWd~~~---~~~~~~~~~~~ 281 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGS---VFGLTWSP-----DGTKIASASADKTIKIWNVAT---LKVEKTIPVGT 281 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSC---EEEEEECT-----TSSEEEEEETTSEEEEEETTT---TEEEEEEECCS
T ss_pred cEEEEECCCCcEeeeeccccccccccCCC---EEEEEECC-----CCCEEEEEeCCCeEEEEeCCC---CceeeeecCCC
Confidence 899999988866553211 168877 555 8999 799999999999999999986 4332
Q ss_pred ------------------------------------eeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 183 ------------------------------------NKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 183 ------------------------------------~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
..+.+|...|.+++|+|++.+|++++.|++|++||+++++
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 2345799999999999999999999999999999998754
No 32
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.4e-19 Score=142.70 Aligned_cols=121 Identities=23% Similarity=0.412 Sum_probs=95.3
Q ss_pred CCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCce------EEeeeeeccccCcceeEEE-eeecCcccCC
Q psy3599 83 QDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAV------QLKRKFNVNHKSSKYQVRS-TFCPIMSFRE 155 (223)
Q Consensus 83 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~------~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~ 155 (223)
+..+|.+++|+ |++.+|++++.|+ .+++|+..... .....+ .+|... +.+ +|+| +
T Consensus 57 h~~~v~~v~~s-------p~~~~las~s~D~--~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~---V~~v~~sp-----~ 118 (330)
T 2hes_X 57 HKKAIRSVAWR-------PHTSLLAAGSFDS--TVSIWAKEESADRTFEMDLLAII-EGHENE---VKGVAWSN-----D 118 (330)
T ss_dssp CCSCEEEEEEC-------TTSSEEEEEETTS--CEEEEEC-------CCCEEEEEE-C----C---EEEEEECT-----T
T ss_pred ccCCEEEEEEC-------CCCCEEEEEeCCC--cEEEEEcccCcCccccceeEEEE-cCCCCc---EEEEEECC-----C
Confidence 37899999999 9999999999999 89999985321 222234 488887 555 8999 7
Q ss_pred CcEEEEecCCCcEEEEEcccC-cccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 156 GACVVTGSEDSCVYFLDIQSK-EHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 156 ~~~l~sgs~dg~v~iwd~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
+.+|++|+.|+.|++||++.. ...+++..+.+|...|.+++|+|++.+|++++.|++|++||.+++
T Consensus 119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 999999999999999999531 113567788999999999999999999999999999999997653
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.83 E-value=4.3e-19 Score=144.43 Aligned_cols=144 Identities=21% Similarity=0.298 Sum_probs=118.8
Q ss_pred cccCCcEEEEEECCCCceeeee-----------------eeeec-----------------CCCCeeEEEEeecccccCC
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK-----------------RLVLS-----------------QDCPITCLSWRSWISREAR 101 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~-----------------~~~~~-----------------~~~~i~~l~~~~~~~~~~~ 101 (223)
++|.+.|.++.|+|+|+++.+. .+..+ ....|.+++|+ +
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s-------~ 133 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS-------P 133 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC-------T
T ss_pred cCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEEC-------C
Confidence 3688999999999999887653 11111 01238999999 9
Q ss_pred CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccc
Q psy3599 102 DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKN 180 (223)
Q Consensus 102 ~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~ 180 (223)
++.+|++++.|+ .+++||..++..+.. + .+|... +.+ .|+| ++.+|++|+.|+.|++||+++ ++
T Consensus 134 dg~~l~s~~~d~--~i~iwd~~~~~~~~~-~-~~h~~~---v~~~~~~p-----~~~~l~s~s~d~~v~iwd~~~---~~ 198 (393)
T 1erj_A 134 DGKFLATGAEDR--LIRIWDIENRKIVMI-L-QGHEQD---IYSLDYFP-----SGDKLVSGSGDRTVRIWDLRT---GQ 198 (393)
T ss_dssp TSSEEEEEETTS--CEEEEETTTTEEEEE-E-CCCSSC---EEEEEECT-----TSSEEEEEETTSEEEEEETTT---TE
T ss_pred CCCEEEEEcCCC--eEEEEECCCCcEEEE-E-ccCCCC---EEEEEEcC-----CCCEEEEecCCCcEEEEECCC---Ce
Confidence 999999999999 899999998876654 4 489888 555 8999 799999999999999999999 77
Q ss_pred cceeecccccCEEEEEEec-CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 181 AVNKLQGHACPVLGVSFNY-DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 181 ~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+...+. +...+.+++|+| ++.+|++|+.|+.|++||+++++
T Consensus 199 ~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~ 240 (393)
T 1erj_A 199 CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 240 (393)
T ss_dssp EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC
T ss_pred eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 777776 556799999999 89999999999999999998754
No 34
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.83 E-value=5.3e-19 Score=139.57 Aligned_cols=144 Identities=18% Similarity=0.282 Sum_probs=114.2
Q ss_pred ccccCCcEEEEEECCCCceeeee----------------------eeeecCCCCeeEEEEeecccccCC--CCeEEEEEe
Q psy3599 55 QLRSTGVIVSILCDDLGRLSKGK----------------------RLVLSQDCPITCLSWRSWISREAR--DPTLLVNIA 110 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~i~~l~~~~~~~~~~~--~~~~l~~~~ 110 (223)
+.+|.+.|.++.|+++++++.+. .+..| ..+|.+++|+ + ++.+|++++
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~v~~~~~~-------~~~d~~~l~s~~ 78 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH-DSSIVAIDWA-------SPEYGRIIASAS 78 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC-SSCEEEEEEC-------CGGGCSEEEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC-CCcEEEEEEc-------CCCCCCEEEEEc
Confidence 34688888888888877765433 22345 7899999999 6 689999999
Q ss_pred CCCeEEEEEecCCCce---------EEeeeeeccccCcceeEEE-eeecCcccCC--CcEEEEecCCCcEEEEEcccCcc
Q psy3599 111 ANAVCILKVLDKEGAV---------QLKRKFNVNHKSSKYQVRS-TFCPIMSFRE--GACVVTGSEDSCVYFLDIQSKEH 178 (223)
Q Consensus 111 ~~~~~~v~i~d~~~~~---------~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~--~~~l~sgs~dg~v~iwd~~~~~~ 178 (223)
.|+ .+++||..++. .+. .+ .+|... +.+ .|+| + +.++++++.||.|++||+++
T Consensus 79 ~dg--~v~vwd~~~~~~~~~~~~~~~~~-~~-~~~~~~---v~~~~~~~-----~~~~~~l~~~~~dg~v~iwd~~~--- 143 (351)
T 3f3f_A 79 YDK--TVKLWEEDPDQEECSGRRWNKLC-TL-NDSKGS---LYSVKFAP-----AHLGLKLACLGNDGILRLYDALE--- 143 (351)
T ss_dssp TTS--CEEEEEECTTSCTTSSCSEEEEE-EE-CCCSSC---EEEEEECC-----GGGCSEEEEEETTCEEEEEECSS---
T ss_pred CCC--eEEEEecCCCcccccccCcceee-ee-cccCCc---eeEEEEcC-----CCCCcEEEEecCCCcEEEecCCC---
Confidence 998 89999988752 233 33 377777 555 8999 6 89999999999999999865
Q ss_pred cc------------------------------------------------------------cceeecccccCEEEEEEe
Q psy3599 179 KN------------------------------------------------------------AVNKLQGHACPVLGVSFN 198 (223)
Q Consensus 179 ~~------------------------------------------------------------~~~~~~~h~~~v~~v~~~ 198 (223)
++ .+..+.+|...|.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~ 223 (351)
T 3f3f_A 144 PSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWA 223 (351)
T ss_dssp TTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEEC
T ss_pred hHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEEC
Confidence 22 144566799999999999
Q ss_pred cCC----CEEEEEeCCCcEEEeeCCCC
Q psy3599 199 YDE----SLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 199 ~~~----~~l~s~s~d~~i~iwd~~~~ 221 (223)
|++ .+|++++.||.|++||++.+
T Consensus 224 p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 224 PSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp CCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred CCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 998 89999999999999998764
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.83 E-value=2.6e-19 Score=140.90 Aligned_cols=122 Identities=16% Similarity=0.339 Sum_probs=109.3
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
.+..| ..+|++++|+ +++.+|++++.++ .+++|+..++..... + .+|... +.+ .|+| ++
T Consensus 18 ~~~gh-~~~v~~~~~s-------~~~~~l~s~~~dg--~i~iw~~~~~~~~~~-~-~~h~~~---v~~~~~~~-----~~ 77 (312)
T 4ery_A 18 TLAGH-TKAVSSVKFS-------PNGEWLASSSADK--LIKIWGAYDGKFEKT-I-SGHKLG---ISDVAWSS-----DS 77 (312)
T ss_dssp EECCC-SSCEEEEEEC-------TTSSEEEEEETTS--CEEEEETTTCCEEEE-E-CCCSSC---EEEEEECT-----TS
T ss_pred EEccc-CCcEEEEEEC-------CCCCEEEEeeCCC--eEEEEeCCCcccchh-h-ccCCCc---eEEEEEcC-----CC
Confidence 55667 8899999999 9999999999999 899999988766553 3 488877 555 8999 79
Q ss_pred cEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+|++|+.|+.|++||+++ ++++..+.+|...|.++.|+|++++|++|+.|+.|++||+++++
T Consensus 78 ~~l~s~~~d~~i~vwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDVSS---GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp SEEEEEETTSEEEEEETTT---CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred CEEEEECCCCEEEEEECCC---CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence 9999999999999999999 88999999999999999999999999999999999999998764
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.82 E-value=4.7e-19 Score=154.00 Aligned_cols=149 Identities=18% Similarity=0.269 Sum_probs=121.9
Q ss_pred ccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 55 QLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+.+|.+.|.++.++++++++.+. .+..| ...|.+++|+ +++.+|++++.|+ .
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h-~~~v~~~~~s-------~~~~~l~s~s~D~--~ 495 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGH-TKDVLSVAFS-------LDNRQIVSASRDR--T 495 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEC-------TTSSCEEEEETTS--C
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCC-CCCEEEEEEe-------CCCCEEEEEeCCC--E
Confidence 34788999999999988876543 34456 8899999999 9999999999999 8
Q ss_pred EEEecCCCceEEeeee-eccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEE
Q psy3599 117 LKVLDKEGAVQLKRKF-NVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLG 194 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~-~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 194 (223)
+++||........... ..+|... +.+ .|+|.. ....+++|+.|+.|++||+++ .++...+.+|...|.+
T Consensus 496 i~iwd~~~~~~~~~~~~~~~h~~~---v~~~~~~~~~---~~~~l~s~s~d~~v~vwd~~~---~~~~~~~~~h~~~v~~ 566 (694)
T 3dm0_A 496 IKLWNTLGECKYTISEGGEGHRDW---VSCVRFSPNT---LQPTIVSASWDKTVKVWNLSN---CKLRSTLAGHTGYVST 566 (694)
T ss_dssp EEEECTTSCEEEEECSSTTSCSSC---EEEEEECSCS---SSCEEEEEETTSCEEEEETTT---CCEEEEECCCSSCEEE
T ss_pred EEEEECCCCcceeeccCCCCCCCc---EEEEEEeCCC---CcceEEEEeCCCeEEEEECCC---CcEEEEEcCCCCCEEE
Confidence 9999986553322110 1257666 666 899831 136899999999999999999 8888999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 195 VSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 195 v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++|+|++.+|++|+.||.|++||+++++
T Consensus 567 v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 567 VAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999999999998764
No 37
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.82 E-value=5.2e-19 Score=141.29 Aligned_cols=121 Identities=16% Similarity=0.226 Sum_probs=104.4
Q ss_pred eeeecCCCCeeEEEE-----eecccccCCCCeEEEEEeCCCeEEEEEecCCCce------EEeeeeeccccCcceeEEE-
Q psy3599 78 RLVLSQDCPITCLSW-----RSWISREARDPTLLVNIAANAVCILKVLDKEGAV------QLKRKFNVNHKSSKYQVRS- 145 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~-----~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~------~~~~~~~~~h~~~~~~i~~- 145 (223)
.+.+| ...|++++| + ++++.+|++++.|+ .+++||...+. .....+ .+|... +.+
T Consensus 16 ~l~gH-~~~V~~~~~~~s~~~------~~d~~~l~sgs~D~--~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~---V~~~ 82 (343)
T 2xzm_R 16 ILEGH-SDWVTSIVAGFSQKE------NEDSPVLISGSRDK--TVMIWKLYEEEQNGYFGIPHKAL-TGHNHF---VSDL 82 (343)
T ss_dssp EEECC-SSCEEEEEECCCSST------TCCCCEEEEEETTS--CEEEEEECSSCCSSBSEEEEEEE-CCCSSC---EEEE
T ss_pred eeccc-hhhhhheeeEEEeec------CCCCCEEEEEcCCC--EEEEEECCcCCcccccccccchh-ccCCCc---eEEE
Confidence 56777 899999999 5 24899999999999 89999986432 222234 488888 555
Q ss_pred eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 146 TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 146 ~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
+|+| ++.++++|+.|+.|++||+++ ++++..+.+|...|.+++|+|++.+|++++.|++|++||+.
T Consensus 83 ~~~~-----~~~~l~s~s~D~~v~lwd~~~---~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 83 ALSQ-----ENCFAISSSWDKTLRLWDLRT---GTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp EECS-----STTEEEEEETTSEEEEEETTS---SCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred EECC-----CCCEEEEEcCCCcEEEEECCC---CcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 8999 799999999999999999999 88899999999999999999999999999999999999986
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.82 E-value=5e-19 Score=145.83 Aligned_cols=145 Identities=15% Similarity=0.143 Sum_probs=112.8
Q ss_pred ccCCcEEEEEECC-CCceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeE
Q psy3599 57 RSTGVIVSILCDD-LGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVC 115 (223)
Q Consensus 57 ~~~~~i~~~~~~~-~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (223)
+++..|.+++|+| ++.+++++ .+..| ..+|++++|+ |.++.+|++++.|+
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH-~~~V~~l~f~------p~~~~~l~s~s~D~-- 187 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA-GGSITGLKFN------PLNTNQFYASSMEG-- 187 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSS-SCCCCEEEEC------SSCTTEEEEECSSS--
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCC-CCCEEEEEEe------CCCCCEEEEEeCCC--
Confidence 5778899999998 45555433 12235 7899999999 24789999999999
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEE
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLG 194 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 194 (223)
.+++||++++.. .... ..+..... +.+ .|+| ++.+|++|+.||.|++||++. +.+..+.+|...|.+
T Consensus 188 ~v~iwd~~~~~~-~~~~-~~~~~~~~-~~~~~~~~-----~~~~l~~g~~dg~i~~wd~~~----~~~~~~~~h~~~v~~ 255 (435)
T 4e54_B 188 TTRLQDFKGNIL-RVFA-SSDTINIW-FCSLDVSA-----SSRMVVTGDNVGNVILLNMDG----KELWNLRMHKKKVTH 255 (435)
T ss_dssp CEEEEETTSCEE-EEEE-CCSSCSCC-CCCEEEET-----TTTEEEEECSSSBEEEEESSS----CBCCCSBCCSSCEEE
T ss_pred EEEEeeccCCce-eEEe-ccCCCCcc-EEEEEECC-----CCCEEEEEeCCCcEeeeccCc----ceeEEEecccceEEe
Confidence 899999987643 2222 13332211 334 7899 799999999999999999875 457788999999999
Q ss_pred EEEecCCC-EEEEEeCCCcEEEeeCCCCC
Q psy3599 195 VSFNYDES-LLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 195 v~~~~~~~-~l~s~s~d~~i~iwd~~~~~ 222 (223)
++|+|++. +|++|+.|+.|++||+++.+
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred eeecCCCceEEEEecCcceeeEEeccccc
Confidence 99999865 78899999999999998754
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.82 E-value=3.4e-19 Score=143.44 Aligned_cols=149 Identities=12% Similarity=0.134 Sum_probs=113.6
Q ss_pred cccccCCcEEEEEECCCCceeeee---------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCC
Q psy3599 54 DQLRSTGVIVSILCDDLGRLSKGK---------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAAN 112 (223)
Q Consensus 54 ~~~~~~~~i~~~~~~~~~~~~~~~---------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~ 112 (223)
.+.+|.+.|.++.|+|+++++.+. .+..| ...|.+++|+ +++.+|++++.+
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~-------~~~~~l~~~~~d 121 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL-NRAATFVRWS-------PNEDKFAVGSGA 121 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC-SSCEEEEECC-------TTSSCCEEEESS
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc-CCceEEEEEC-------CCCCEEEEEecC
Confidence 334678888888888877655432 12234 7799999999 899999999999
Q ss_pred CeEEEEEecCCCceE--Eeeeeecc-ccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCc-----------
Q psy3599 113 AVCILKVLDKEGAVQ--LKRKFNVN-HKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKE----------- 177 (223)
Q Consensus 113 ~~~~v~i~d~~~~~~--~~~~~~~~-h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~----------- 177 (223)
+ .+++||+.++.. +...+. + |... +.+ +|+| ++.+|++|+.|+.|++||+....
T Consensus 122 ~--~i~iwd~~~~~~~~~~~~~~-~~h~~~---v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 190 (377)
T 3dwl_C 122 R--VISVCYFEQENDWWVSKHLK-RPLRST---ILSLDWHP-----NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWG 190 (377)
T ss_dssp S--CEEECCC-----CCCCEEEC-SSCCSC---EEEEEECT-----TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSC
T ss_pred C--eEEEEEECCcccceeeeEee-cccCCC---eEEEEEcC-----CCCEEEEEeCCCEEEEEEEEecccCCCccccccc
Confidence 8 899999987753 222332 4 7777 555 8999 79999999999999999985200
Q ss_pred ----ccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 178 ----HKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 178 ----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.++++..+ +|...|.+++|+|++.+|++++.|+.|++||+++++
T Consensus 191 ~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 191 SRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp SCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred cccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 04566666 899999999999999999999999999999998765
No 40
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.81 E-value=5.6e-19 Score=143.81 Aligned_cols=143 Identities=15% Similarity=0.251 Sum_probs=117.0
Q ss_pred ccCCcEEEEEECCCCceee-eeeeeecCCCCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCce-------E
Q psy3599 57 RSTGVIVSILCDDLGRLSK-GKRLVLSQDCPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAV-------Q 127 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~-------~ 127 (223)
..+|.|..+.++..+++.. ...+..| ..+|++++|+ + ++.+|++++.|+ .+++|+..++. .
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~-------p~~~~~l~s~s~dg--~v~vw~~~~~~~~~~~~~~ 123 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGH-TAPVLDIAWC-------PHNDNVIASGSEDC--TVMVWEIPDGGLVLPLREP 123 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCC-SSCEEEEEEC-------TTCTTEEEEEETTS--EEEEEECCTTCCSSCBCSC
T ss_pred cCCCEEEEEECccCCCCCCCCceEecC-CCCEEEEEeC-------CCCCCEEEEEeCCC--eEEEEEccCCCCccccCCc
Confidence 3467777666665554422 2245566 8999999999 7 899999999999 89999998763 2
Q ss_pred EeeeeeccccCcceeEEE-eeecCcccCCC-cEEEEecCCCcEEEEEcccCcccccceee--cccccCEEEEEEecCCCE
Q psy3599 128 LKRKFNVNHKSSKYQVRS-TFCPIMSFREG-ACVVTGSEDSCVYFLDIQSKEHKNAVNKL--QGHACPVLGVSFNYDESL 203 (223)
Q Consensus 128 ~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~-~~l~sgs~dg~v~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~~~~~~~ 203 (223)
+. .+ .+|... +.+ .|+| ++ .++++|+.||.|++||+++ ++++..+ .+|...|.+++|+|++.+
T Consensus 124 ~~-~~-~~h~~~---v~~~~~~p-----~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 124 VI-TL-EGHTKR---VGIVAWHP-----TAQNVLLSAGCDNVILVWDVGT---GAAVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp SE-EE-ECCSSC---EEEEEECS-----SBTTEEEEEETTSCEEEEETTT---TEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred eE-Ee-cCCCCe---EEEEEECc-----CCCCEEEEEcCCCEEEEEECCC---CCccEEEecCCCCCceEEEEECCCCCE
Confidence 22 33 388877 555 8999 55 7999999999999999999 8888888 789999999999999999
Q ss_pred EEEEeCCCcEEEeeCCCCC
Q psy3599 204 LATSDYQGLIILWSREKHE 222 (223)
Q Consensus 204 l~s~s~d~~i~iwd~~~~~ 222 (223)
|++++.|+.|++||+++++
T Consensus 191 l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp EEEEETTSEEEEEETTTTE
T ss_pred EEEEecCCcEEEEeCCCCc
Confidence 9999999999999998764
No 41
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.81 E-value=1.9e-18 Score=136.73 Aligned_cols=119 Identities=12% Similarity=0.167 Sum_probs=95.5
Q ss_pred eeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCc
Q psy3599 79 LVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGA 157 (223)
Q Consensus 79 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~ 157 (223)
+..| ..+|++++|+ |++.+|++++.|+ .+++||..+...+... .+... +.+ .|+| ++
T Consensus 211 ~~~h-~~~v~~~~~s-------~~~~~l~s~s~Dg--~i~iwd~~~~~~~~~~---~~~~~---v~~~~~~~-----~~- 268 (340)
T 4aow_A 211 HIGH-TGYLNTVTVS-------PDGSLCASGGKDG--QAMLWDLNEGKHLYTL---DGGDI---INALCFSP-----NR- 268 (340)
T ss_dssp ECCC-SSCEEEEEEC-------TTSSEEEEEETTC--EEEEEETTTTEEEEEE---ECSSC---EEEEEECS-----SS-
T ss_pred ecCC-CCcEEEEEEC-------CCCCEEEEEeCCC--eEEEEEeccCceeeee---cCCce---EEeeecCC-----CC-
Confidence 4455 7899999999 9999999999999 9999999988776542 33344 555 7888 44
Q ss_pred EEEEecCCCcEEEEEcccCcccccceee---------cccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 158 CVVTGSEDSCVYFLDIQSKEHKNAVNKL---------QGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 158 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~---------~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+++++.|+.|++||++. +.++..+ .+|...|++++|+|++++|++|+.||.|+|||+++|+
T Consensus 269 ~~~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 269 YWLCAATGPSIKIWDLEG---KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SEEEEEETTEEEEEETTT---TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ceeeccCCCEEEEEECCC---CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 455677899999999987 5544433 4688899999999999999999999999999999875
No 42
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.81 E-value=3.7e-18 Score=137.85 Aligned_cols=146 Identities=15% Similarity=0.127 Sum_probs=117.3
Q ss_pred cccccCCcEEEEEECCCC-ceeeee------------------eee--ecCCCCeeEEEEeecccccCC-CCeEEEEEeC
Q psy3599 54 DQLRSTGVIVSILCDDLG-RLSKGK------------------RLV--LSQDCPITCLSWRSWISREAR-DPTLLVNIAA 111 (223)
Q Consensus 54 ~~~~~~~~i~~~~~~~~~-~~~~~~------------------~~~--~~~~~~i~~l~~~~~~~~~~~-~~~~l~~~~~ 111 (223)
.+.+|.+.|.++.|++++ +++.+. .+. .| ...|.+++|+ + ++.+|++++.
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~~-------~~~~~~l~s~~~ 139 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGP-GDAITGMKFN-------QFNTNQLFVSSI 139 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCST-TCBEEEEEEE-------TTEEEEEEEEET
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCc-CCceeEEEeC-------CCCCCEEEEEeC
Confidence 445788999999999987 665443 121 24 8899999999 7 7899999999
Q ss_pred CCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccccc
Q psy3599 112 NAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHAC 190 (223)
Q Consensus 112 ~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~ 190 (223)
++ .+++||..+. .+... ..+......+.+ +|+| ++.++++|+.|+.|++||+ . ++++..+.+|..
T Consensus 140 d~--~i~iwd~~~~-~~~~~--~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~i~d~-~---~~~~~~~~~h~~ 205 (383)
T 3ei3_B 140 RG--ATTLRDFSGS-VIQVF--AKTDSWDYWYCCVDVSV-----SRQMLATGDSTGRLLLLGL-D---GHEIFKEKLHKA 205 (383)
T ss_dssp TT--EEEEEETTSC-EEEEE--ECCCCSSCCEEEEEEET-----TTTEEEEEETTSEEEEEET-T---SCEEEEEECSSS
T ss_pred CC--EEEEEECCCC-ceEEE--eccCCCCCCeEEEEECC-----CCCEEEEECCCCCEEEEEC-C---CCEEEEeccCCC
Confidence 99 8999999864 33322 233321112666 8999 7999999999999999999 4 567888999999
Q ss_pred CEEEEEEecCCC-EEEEEeCCCcEEEeeCCCC
Q psy3599 191 PVLGVSFNYDES-LLATSDYQGLIILWSREKH 221 (223)
Q Consensus 191 ~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~ 221 (223)
.|.+++|+|++. +|++++.|+.|++||++++
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 999999999998 9999999999999999873
No 43
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.81 E-value=5.2e-18 Score=139.08 Aligned_cols=144 Identities=13% Similarity=0.224 Sum_probs=111.2
Q ss_pred ccCCcEEEEEECCCCceeeee----------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEE--eCC
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK----------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNI--AAN 112 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~--~~~ 112 (223)
+|.+.+..+.++++++.+.+. ....| ...|.+++|+ |.++.+++++ +.|
T Consensus 228 ~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~-~~~V~~~~~~------p~~~~~la~~~gs~D 300 (420)
T 4gga_A 228 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWC------PWQSNVLATGGGTSD 300 (420)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCC-SSCEEEEEEC------TTCTTEEEEEECTTT
T ss_pred ccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeeccc-CCceeeeeeC------CCcccEEEEEeecCC
Confidence 567778888888876655432 12223 6789999999 2455666654 467
Q ss_pred CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEe--cCCCcEEEEEcccCcccccceeeccccc
Q psy3599 113 AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTG--SEDSCVYFLDIQSKEHKNAVNKLQGHAC 190 (223)
Q Consensus 113 ~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sg--s~dg~v~iwd~~~~~~~~~~~~~~~h~~ 190 (223)
+ .|++||..++..+... .+...+ ..+.|+| ++..++++ +.|+.|++||+.+ ++++..+.+|..
T Consensus 301 ~--~I~iwd~~t~~~~~~~---~~~~~v--~~~~~~~-----~~~~lv~~sg~~d~~I~iwd~~~---~~~v~~l~gH~~ 365 (420)
T 4gga_A 301 R--HIRIWNVCSGACLSAV---DAHSQV--CSILWSP-----HYKELISGHGFAQNQLVIWKYPT---MAKVAELKGHTS 365 (420)
T ss_dssp C--EEEEEETTTTEEEEEE---ECSSCE--EEEEEET-----TTTEEEEEECTTTCCEEEEETTT---CCEEEEECCCSS
T ss_pred C--EEEEEeCCccccceee---ccccce--eeeeecC-----CCCeEEEEEecCCCEEEEEECCC---CcEEEEEcCCCC
Confidence 8 8999999999776643 233332 4458888 57766654 4799999999999 899999999999
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 191 PVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 191 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.|++++|+|+|.+|+||+.|++|+|||+....
T Consensus 366 ~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 366 RVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp CEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99999999999999999999999999987644
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.81 E-value=4.7e-18 Score=135.56 Aligned_cols=117 Identities=19% Similarity=0.371 Sum_probs=102.7
Q ss_pred CCCeeEEEEeecccccCCC----CeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcE
Q psy3599 84 DCPITCLSWRSWISREARD----PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGAC 158 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~----~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~ 158 (223)
...|.+++|+ ++ +.+|++++.++ .+++||..++..+.. + .+|... +.+ .|+|. ++.+
T Consensus 69 ~~~v~~~~~~-------~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~~~~-~-~~~~~~---i~~~~~~~~----~~~~ 130 (366)
T 3k26_A 69 DENFYTCAWT-------YDSNTSHPLLAVAGSRG--IIRIINPITMQCIKH-Y-VGHGNA---INELKFHPR----DPNL 130 (366)
T ss_dssp TCCEEEEEEE-------ECTTTCCEEEEEEETTC--EEEEECTTTCCEEEE-E-ESCCSC---EEEEEECSS----CTTE
T ss_pred CCcEEEEEec-------cCCCCCCCEEEEecCCC--EEEEEEchhceEeee-e-cCCCCc---EEEEEECCC----CCCE
Confidence 5789999999 66 78999999999 999999998876654 4 378877 565 89984 5899
Q ss_pred EEEecCCCcEEEEEcccCcccccceee---cccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 159 VVTGSEDSCVYFLDIQSKEHKNAVNKL---QGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 159 l~sgs~dg~v~iwd~~~~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
+++|+.||.|++||+++ ++.+..+ .+|...|.+++|+|++..|++++.||.|++||++++
T Consensus 131 l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 131 LLSVSKDHALRLWNIQT---DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp EEEEETTSCEEEEETTT---TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH
T ss_pred EEEEeCCCeEEEEEeec---CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCC
Confidence 99999999999999998 7777777 789999999999999999999999999999999864
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.80 E-value=3e-19 Score=143.75 Aligned_cols=119 Identities=15% Similarity=0.202 Sum_probs=94.4
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCce---EEeeeeeccccCcceeEEE-eeecCccc
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAV---QLKRKFNVNHKSSKYQVRS-TFCPIMSF 153 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~---~~~~~~~~~h~~~~~~i~~-~~s~~~~~ 153 (223)
.+..| ...|.+++|+ +++.+|++++.|+ .+++||..++. ... .+ .+|... +.+ .|+|
T Consensus 50 ~~~~h-~~~v~~~~~s-------~~~~~l~s~s~d~--~v~vwd~~~~~~~~~~~-~~-~~~~~~---v~~~~~~~---- 110 (377)
T 3dwl_C 50 TFSDH-DKIVTCVDWA-------PKSNRIVTCSQDR--NAYVYEKRPDGTWKQTL-VL-LRLNRA---ATFVRWSP---- 110 (377)
T ss_dssp CBCCC-SSCEEEEEEC-------TTTCCEEEEETTS--SEEEC------CCCCEE-EC-CCCSSC---EEEEECCT----
T ss_pred EEecC-CceEEEEEEe-------CCCCEEEEEeCCC--eEEEEEcCCCCceeeee-Ee-cccCCc---eEEEEECC----
Confidence 34556 8899999999 9999999999988 89999998775 222 22 477777 555 8999
Q ss_pred CCCcEEEEecCCCcEEEEEcccCcccc---cceeecc-cccCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 154 REGACVVTGSEDSCVYFLDIQSKEHKN---AVNKLQG-HACPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 154 ~~~~~l~sgs~dg~v~iwd~~~~~~~~---~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
++.+|++|+.|+.|++||++. ++ +...+.. |...|.+++|+|++.+|++++.|+.|++||++
T Consensus 111 -~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 111 -NEDKFAVGSGARVISVCYFEQ---ENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp -TSSCCEEEESSSCEEECCC--------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred -CCCEEEEEecCCeEEEEEECC---cccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 799999999999999999998 55 4677777 99999999999999999999999999999985
No 46
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.80 E-value=3.7e-18 Score=144.70 Aligned_cols=138 Identities=21% Similarity=0.406 Sum_probs=116.9
Q ss_pred ccCCcEEEEEECCCCceeeee-----------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK-----------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKV 119 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 119 (223)
+|.+.|.++.|+|+|+.+.+. .+..| ...|++++|+ |++.+|++++.++ .+++
T Consensus 383 ~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~-~~~v~~~~~s-------~d~~~l~~~~~d~--~v~~ 452 (577)
T 2ymu_A 383 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH-SSSVWGVAFS-------PDDQTIASASDDK--TVKL 452 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECC-SSCEEEEEEC-------TTSSEEEEEETTS--EEEE
T ss_pred CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCC-CCCeEEEEEC-------CCCCEEEEEcCCC--EEEE
Confidence 577889999999988766443 23445 7899999999 9999999999999 8999
Q ss_pred ecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEe
Q psy3599 120 LDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFN 198 (223)
Q Consensus 120 ~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 198 (223)
||.... .+. .+ .+|... +.+ +|+| ++.+|++++.|+.|++||. + ++++..+.+|...|++++|+
T Consensus 453 w~~~~~-~~~-~~-~~~~~~---v~~~~~sp-----d~~~las~~~d~~i~iw~~-~---~~~~~~~~~h~~~v~~l~~s 517 (577)
T 2ymu_A 453 WNRNGQ-LLQ-TL-TGHSSS---VRGVAFSP-----DGQTIASASDDKTVKLWNR-N---GQLLQTLTGHSSSVRGVAFS 517 (577)
T ss_dssp EETTSC-EEE-EE-ECCSSC---EEEEEECT-----TSCEEEEEETTSEEEEEET-T---SCEEEEEECCSSCEEEEEEC
T ss_pred EECCCC-EEE-EE-cCCCCC---EEEEEEcC-----CCCEEEEEeCCCEEEEEcC-C---CCEEEEEeCCCCCEEEEEEc
Confidence 997543 444 33 488877 665 8999 8999999999999999995 4 57888999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeCC
Q psy3599 199 YDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 199 ~~~~~l~s~s~d~~i~iwd~~ 219 (223)
|++.+|++++.|+.|++||..
T Consensus 518 ~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 518 PDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTT
T ss_pred CCCCEEEEEECcCEEEEEeCC
Confidence 999999999999999999963
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=4.3e-18 Score=136.43 Aligned_cols=145 Identities=18% Similarity=0.285 Sum_probs=116.5
Q ss_pred ccccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCC--CeEEEEEeCC
Q psy3599 55 QLRSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARD--PTLLVNIAAN 112 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~--~~~l~~~~~~ 112 (223)
+.+|.+.|.++.|+++++++.+. .+..| ..+|++++|+ ++ +.+|++++.|
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~-------~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWA-------HPKFGTILASCSYD 78 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEEC-------CGGGCSEEEEEETT
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCC-CCcEEEEEeC-------CCCCCCEEEEeccC
Confidence 34678888888888877665433 23345 7899999998 55 8999999999
Q ss_pred CeEEEEEecCCCce--EEeeeeeccccCcceeEEE-eeecCcccCC--CcEEEEecCCCcEEEEEcccCccc--ccceee
Q psy3599 113 AVCILKVLDKEGAV--QLKRKFNVNHKSSKYQVRS-TFCPIMSFRE--GACVVTGSEDSCVYFLDIQSKEHK--NAVNKL 185 (223)
Q Consensus 113 ~~~~v~i~d~~~~~--~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~--~~~l~sgs~dg~v~iwd~~~~~~~--~~~~~~ 185 (223)
+ .+++||..++. .+. .+ .+|... +.+ .|+| + +.++++++.|+.|++||+.. . .....+
T Consensus 79 g--~v~iwd~~~~~~~~~~-~~-~~~~~~---v~~~~~~~-----~~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~~~ 143 (379)
T 3jrp_A 79 G--KVLIWKEENGRWSQIA-VH-AVHSAS---VNSVQWAP-----HEYGPLLLVASSDGKVSVVEFKE---NGTTSPIII 143 (379)
T ss_dssp S--CEEEEEEETTEEEEEE-EE-CCCSSC---EEEEEECC-----GGGCSEEEEEETTSEEEEEECCT---TSCCCEEEE
T ss_pred C--EEEEEEcCCCceeEee-ee-cCCCcc---eEEEEeCC-----CCCCCEEEEecCCCcEEEEecCC---CCceeeEEe
Confidence 8 89999998875 332 22 467777 665 8999 6 89999999999999999988 4 334566
Q ss_pred cccccCEEEEEEec-------------CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 186 QGHACPVLGVSFNY-------------DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 186 ~~h~~~v~~v~~~~-------------~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+|...|.+++|+| ++.+|++++.|+.|++||+++++
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC
Confidence 78999999999999 69999999999999999987653
No 48
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.80 E-value=2.6e-18 Score=151.09 Aligned_cols=147 Identities=16% Similarity=0.228 Sum_probs=124.8
Q ss_pred ccccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCe
Q psy3599 53 NDQLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAV 114 (223)
Q Consensus 53 ~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~ 114 (223)
..+.+|.+.|.+++|+|+|+++... .+..| ..+|.+++|+ +++.+|++++.++
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~s-------~~~~~l~~~~~dg- 77 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVT-ETPVRAGKFI-------ARKNWIIVGSDDF- 77 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEE-------GGGTEEEEEETTS-
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecC-CCcEEEEEEe-------CCCCEEEEEeCCC-
Confidence 3445788889999999988766443 33445 8899999999 9999999999999
Q ss_pred EEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccc-ccceeecccccCE
Q psy3599 115 CILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHK-NAVNKLQGHACPV 192 (223)
Q Consensus 115 ~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~-~~~~~~~~h~~~v 192 (223)
.+++||..++..+... .+|... +.+ .|+| ++.++++|+.||.|++||+.+ + .+...+.+|...|
T Consensus 78 -~i~vw~~~~~~~~~~~--~~~~~~---v~~~~~s~-----~~~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~~v 143 (814)
T 3mkq_A 78 -RIRVFNYNTGEKVVDF--EAHPDY---IRSIAVHP-----TKPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHEHFV 143 (814)
T ss_dssp -EEEEEETTTCCEEEEE--ECCSSC---EEEEEECS-----SSSEEEEEETTSEEEEEEGGG---TSEEEEEEECCSSCE
T ss_pred -eEEEEECCCCcEEEEE--ecCCCC---EEEEEEeC-----CCCEEEEEcCCCEEEEEECCC---CceEEEEEcCCCCcE
Confidence 8999999988766643 478877 665 8999 799999999999999999998 5 6677888999999
Q ss_pred EEEEEec-CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 193 LGVSFNY-DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 193 ~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+++|+| ++..|++++.||.|++||+++++
T Consensus 144 ~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999 78999999999999999997654
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.80 E-value=5.7e-18 Score=133.61 Aligned_cols=145 Identities=15% Similarity=0.197 Sum_probs=118.6
Q ss_pred cccCCcEEEEEECCCCceeeee--------------------eee--ecCCCCeeEEEEeecccccCCCCeEEEEEeCCC
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK--------------------RLV--LSQDCPITCLSWRSWISREARDPTLLVNIAANA 113 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~--------------------~~~--~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~ 113 (223)
.+|.+.|.++.|+++++++... .+. .| ...|.+++|+ +++.+|++++.++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~-------~~~~~l~~~~~d~ 119 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNR-DNYIRSCKLL-------PDGCTLIVGGEAS 119 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCT-TSBEEEEEEC-------TTSSEEEEEESSS
T ss_pred ccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCC-CCcEEEEEEc-------CCCCEEEEEcCCC
Confidence 3677788888888877665432 111 23 7889999999 9999999999999
Q ss_pred eEEEEEecCCCceEE-eeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccC
Q psy3599 114 VCILKVLDKEGAVQL-KRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACP 191 (223)
Q Consensus 114 ~~~v~i~d~~~~~~~-~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~ 191 (223)
.+++||..++... ...+ .+|... +.+ .|+| ++.++++++.||.|++||+++ ++.+..+..|...
T Consensus 120 --~i~~~d~~~~~~~~~~~~-~~~~~~---i~~~~~~~-----~~~~l~~~~~dg~v~~~d~~~---~~~~~~~~~~~~~ 185 (337)
T 1gxr_A 120 --TLSIWDLAAPTPRIKAEL-TSSAPA---CYALAISP-----DSKVCFSCCSDGNIAVWDLHN---QTLVRQFQGHTDG 185 (337)
T ss_dssp --EEEEEECCCC--EEEEEE-ECSSSC---EEEEEECT-----TSSEEEEEETTSCEEEEETTT---TEEEEEECCCSSC
T ss_pred --cEEEEECCCCCcceeeec-ccCCCc---eEEEEECC-----CCCEEEEEeCCCcEEEEeCCC---CceeeeeecccCc
Confidence 8999999876522 2233 367666 555 8999 799999999999999999999 8889999999999
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 192 VLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 192 v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|.+++|+|++..|++++.|+.|++||+++++
T Consensus 186 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEECCCCc
Confidence 9999999999999999999999999998754
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.80 E-value=6.2e-19 Score=139.45 Aligned_cols=123 Identities=19% Similarity=0.169 Sum_probs=99.8
Q ss_pred eeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceE-EeeeeeccccCcceeEEE-eeecCcccCCC
Q psy3599 79 LVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQ-LKRKFNVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 79 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~-~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
+..| ..+|++++|+ +++.+|++++.|+ .+++||+.++.. ....+. +|... +.+ +|+|.. ++
T Consensus 9 ~~~H-~~~V~~v~~s-------~~g~~lasgs~D~--~v~lwd~~~~~~~~~~~l~-gH~~~---V~~v~~~~~~---~~ 71 (316)
T 3bg1_A 9 DTSH-EDMIHDAQMD-------YYGTRLATCSSDR--SVKIFDVRNGGQILIADLR-GHEGP---VWQVAWAHPM---YG 71 (316)
T ss_dssp ------CCEEEEEEC-------GGGCEEEEEETTT--EEEEEEEETTEEEEEEEEE-CCSSC---EEEEEECCGG---GS
T ss_pred cccc-cCeEEEeeEc-------CCCCEEEEEeCCC--eEEEEEecCCCcEEEEEEc-CCCcc---EEEEEeCCCC---CC
Confidence 3456 8999999999 9999999999999 999999987643 233443 89888 555 787510 37
Q ss_pred cEEEEecCCCcEEEEEcccCccc--ccceeecccccCEEEEEEecC--CCEEEEEeCCCcEEEeeCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHK--NAVNKLQGHACPVLGVSFNYD--ESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~--~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.+|++|+.|+.|++||+++ + +.+..+.+|...|.+++|+|+ +.+|++|+.|++|++||++.+
T Consensus 72 ~~l~s~s~D~~v~iWd~~~---~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREEN---GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp SCEEEEETTSCEEEECCSS---SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred CEEEEEECCCEEEEEECCC---CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 8999999999999999987 5 456678889999999999998 789999999999999998754
No 51
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.80 E-value=6.4e-18 Score=155.02 Aligned_cols=146 Identities=19% Similarity=0.300 Sum_probs=126.3
Q ss_pred ccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 55 QLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+.+|.+.|.++.|+|+|+++.+. .+..| ...|.+++|+ +++.+|++++.++ .
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h-~~~v~~~~~s-------~~~~~l~s~~~d~--~ 680 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAH-EDEVLCCAFS-------SDDSYIATCSADK--K 680 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS--E
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC-CCCEEEEEEe-------cCCCEEEEEeCCC--e
Confidence 34789999999999998877554 33445 8899999999 9999999999999 8
Q ss_pred EEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEE
Q psy3599 117 LKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGV 195 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v 195 (223)
+++||..++..+.. + .+|... +.+ .|+|.. ++.++++|+.|+.|++||+.+ ++++..+.+|...|.++
T Consensus 681 v~vwd~~~~~~~~~-~-~~~~~~---v~~~~~~~~~---~~~~l~sg~~d~~v~vwd~~~---~~~~~~~~~h~~~v~~~ 749 (1249)
T 3sfz_A 681 VKIWDSATGKLVHT-Y-DEHSEQ---VNCCHFTNKS---NHLLLATGSNDFFLKLWDLNQ---KECRNTMFGHTNSVNHC 749 (1249)
T ss_dssp EEEEETTTCCEEEE-E-ECCSSC---EEEEEECSSS---SCCEEEEEETTSCEEEEETTS---SSEEEEECCCSSCEEEE
T ss_pred EEEEECCCCceEEE-E-cCCCCc---EEEEEEecCC---CceEEEEEeCCCeEEEEECCC---cchhheecCCCCCEEEE
Confidence 99999999877664 4 488877 555 898832 356899999999999999999 88999999999999999
Q ss_pred EEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 196 SFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 196 ~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
+|+|++..+++++.||.|++||++++
T Consensus 750 ~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 750 RFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp EECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred EEecCCCEEEEEECCCeEEEEeCCCC
Confidence 99999999999999999999998765
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.80 E-value=1.1e-17 Score=136.42 Aligned_cols=147 Identities=12% Similarity=0.189 Sum_probs=116.8
Q ss_pred cccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEE
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCIL 117 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v 117 (223)
.+|.+.|.++.|+|+++++.+. .+..| ...|.+++|+ +++.+|++++.++ .+
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~-------~~~~~l~s~~~d~--~v 205 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH-RATVTDIAII-------DRGRNVLSASLDG--TI 205 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC-SSCEEEEEEE-------TTTTEEEEEETTS--CE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC-CCcEEEEEEc-------CCCCEEEEEcCCC--cE
Confidence 3688999999999988766443 34445 8899999999 9999999999999 89
Q ss_pred EEecCCCceEEeeeeeccccCcceeEEE----------------------eeecCcccCCCcEEEEecCCCcEEEEEccc
Q psy3599 118 KVLDKEGAVQLKRKFNVNHKSSKYQVRS----------------------TFCPIMSFREGACVVTGSEDSCVYFLDIQS 175 (223)
Q Consensus 118 ~i~d~~~~~~~~~~~~~~h~~~~~~i~~----------------------~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~ 175 (223)
++||..++..+... . .|......+.+ .|+| ++.++++|+.||.|++||+++
T Consensus 206 ~iwd~~~~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 206 RLWECGTGTTIHTF-N-RKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-----YGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp EEEETTTTEEEEEE-C-BTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-----TTEEEEEEETTSCEEEEETTT
T ss_pred EEeECCCCceeEEe-e-cCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-----CCCEEEEEcCCCeEEEEECCC
Confidence 99999988766543 2 32211111222 3456 789999999999999999998
Q ss_pred Ccccccceeec-ccccCEEEEEEecCCC-EEEEEeCCCcEEEeeCCCCC
Q psy3599 176 KEHKNAVNKLQ-GHACPVLGVSFNYDES-LLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 176 ~~~~~~~~~~~-~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~ 222 (223)
++.+..+. .|...|.+++|+|++. +|++|+.||.|++||+++++
T Consensus 279 ---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 279 ---KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp ---CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred ---CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 66666554 5888999999999998 99999999999999998763
No 53
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=4.2e-18 Score=135.99 Aligned_cols=117 Identities=9% Similarity=0.085 Sum_probs=98.9
Q ss_pred CCCeeEEEEeecccccCC--CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEE
Q psy3599 84 DCPITCLSWRSWISREAR--DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVV 160 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~--~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~ 160 (223)
..+|.+++|+ | ++.+|++++.|+ .+++||+.++..+.. +...|... +.+ +|+| ++.+++
T Consensus 125 ~~~v~~~~~~-------~~~~~~~l~s~s~dg--~i~~wd~~~~~~~~~-~~~~~~~~---i~~~~~~p-----dg~~la 186 (343)
T 3lrv_A 125 ANEIIYMYGH-------NEVNTEYFIWADNRG--TIGFQSYEDDSQYIV-HSAKSDVE---YSSGVLHK-----DSLLLA 186 (343)
T ss_dssp SSCEEEEECC-------C---CCEEEEEETTC--CEEEEESSSSCEEEE-ECCCSSCC---CCEEEECT-----TSCEEE
T ss_pred CCCEEEEEcC-------CCCCCCEEEEEeCCC--cEEEEECCCCcEEEE-EecCCCCc---eEEEEECC-----CCCEEE
Confidence 5789999999 8 999999999999 899999998876543 22133334 555 8999 799999
Q ss_pred EecCCCcEEEEEcccCcccccc-eeecc-cccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 161 TGSEDSCVYFLDIQSKEHKNAV-NKLQG-HACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 161 sgs~dg~v~iwd~~~~~~~~~~-~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|+.||.|++||+++ ++.+ ..+.. |...|.+++|+|++.+|++++ |+.|++||+++++
T Consensus 187 sg~~dg~i~iwd~~~---~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 187 LYSPDGILDVYNLSS---PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp EECTTSCEEEEESSC---TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSST
T ss_pred EEcCCCEEEEEECCC---CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCC
Confidence 999999999999999 7777 77888 999999999999999999999 5599999998865
No 54
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.80 E-value=4.6e-19 Score=140.20 Aligned_cols=149 Identities=19% Similarity=0.241 Sum_probs=109.3
Q ss_pred cccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeE
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVC 115 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (223)
.+|.+.|.+++|+++|+++.+. .+..| ..+|.+++|++ +.++.+|++++.|+
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~-----~~~~~~l~s~s~D~-- 81 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAH-----PMYGNILASCSYDR-- 81 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECC-SSCEEEEEECC-----GGGSSCEEEEETTS--
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCC-CccEEEEEeCC-----CCCCCEEEEEECCC--
Confidence 3577777777777766654332 24456 88999999981 02488999999999
Q ss_pred EEEEecCCCce--EEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCE
Q psy3599 116 ILKVLDKEGAV--QLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPV 192 (223)
Q Consensus 116 ~v~i~d~~~~~--~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v 192 (223)
.+++||..++. .+. .+ .+|... +.+ +|+|.. ++.+|++|+.|+.|++||++..........+.+|...|
T Consensus 82 ~v~iWd~~~~~~~~~~-~~-~~h~~~---V~~v~~~p~~---~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v 153 (316)
T 3bg1_A 82 KVIIWREENGTWEKSH-EH-AGHDSS---VNSVCWAPHD---YGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGC 153 (316)
T ss_dssp CEEEECCSSSCCCEEE-EE-CCCSSC---CCEEEECCTT---TCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCB
T ss_pred EEEEEECCCCcceEEE-Ec-cCCCCc---eEEEEECCCC---CCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCc
Confidence 89999998763 222 33 378887 444 899821 27899999999999999998711012345677899999
Q ss_pred EEEEEecC-----------------CCEEEEEeCCCcEEEeeCCC
Q psy3599 193 LGVSFNYD-----------------ESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 193 ~~v~~~~~-----------------~~~l~s~s~d~~i~iwd~~~ 220 (223)
.+++|+|+ +.+|++|+.|++|++||++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC
Confidence 99999997 46899999999999999864
No 55
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.79 E-value=5e-18 Score=137.32 Aligned_cols=117 Identities=17% Similarity=0.197 Sum_probs=102.2
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCC---CeEEEEEecCCCceEEeeeeecc-------------ccCcceeEEE-e
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAAN---AVCILKVLDKEGAVQLKRKFNVN-------------HKSSKYQVRS-T 146 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~d~~~~~~~~~~~~~~-------------h~~~~~~i~~-~ 146 (223)
..+|.+++|+ +++.+|++++.+ + .+++||..++..+... .+ |... +.+ .
T Consensus 233 ~~~i~~i~~~-------~~~~~l~~~~~d~~~g--~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---v~~~~ 298 (397)
T 1sq9_A 233 SNSIRSVKFS-------PQGSLLAIAHDSNSFG--CITLYETEFGERIGSL--SVPTHSSQASLGEFAHSSW---VMSLS 298 (397)
T ss_dssp CCCEEEEEEC-------SSTTEEEEEEEETTEE--EEEEEETTTCCEEEEE--CBC--------CCBSBSSC---EEEEE
T ss_pred CCccceEEEC-------CCCCEEEEEecCCCCc--eEEEEECCCCccccee--ccCcccccccccccccCCc---EEEEE
Confidence 6789999999 899999999987 7 8999999888766543 35 7777 555 8
Q ss_pred eecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeec------cc---------------ccCEEEEEEecCC----
Q psy3599 147 FCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQ------GH---------------ACPVLGVSFNYDE---- 201 (223)
Q Consensus 147 ~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~------~h---------------~~~v~~v~~~~~~---- 201 (223)
|+| ++.+|++|+.||.|++||+++ ++++..+. +| ...|.+++|+|++
T Consensus 299 ~~~-----~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 299 FND-----SGETLCSAGWDGKLRFWDVKT---KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp ECS-----SSSEEEEEETTSEEEEEETTT---TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred ECC-----CCCEEEEEeCCCeEEEEEcCC---CceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 999 799999999999999999999 88888888 78 8999999999998
Q ss_pred ------CEEEEEeCCCcEEEeeCCCCC
Q psy3599 202 ------SLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 202 ------~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+|++++.||.|++||+++++
T Consensus 371 ~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 371 MGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998864
No 56
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.79 E-value=6.8e-18 Score=136.21 Aligned_cols=147 Identities=10% Similarity=0.143 Sum_probs=108.9
Q ss_pred cCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEE
Q psy3599 58 STGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKV 119 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 119 (223)
+...+..++|+|+|+++... .....+...|.+++|+ |++.+|++++++. .+ +
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fs-------pdg~~l~s~s~~~--~~-~ 201 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFS-------TDGKVVAYITGSS--LE-V 201 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEEC-------TTSSEEEEECSSC--EE-E
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEc-------cCCceEEecccee--EE-E
Confidence 34568888999988875422 1122336789999999 9999999999888 44 4
Q ss_pred ecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCC----cEEEEEcccCcc-cccceeecccccCEE
Q psy3599 120 LDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDS----CVYFLDIQSKEH-KNAVNKLQGHACPVL 193 (223)
Q Consensus 120 ~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg----~v~iwd~~~~~~-~~~~~~~~~h~~~v~ 193 (223)
|+..++..+......+|... +.+ .|+| ++..+++++.|+ .+++|++..... ......+.+|...|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~---v~~v~fsp-----dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 202 ISTVTGSCIARKTDFDKNWS---LSKINFIA-----DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp EETTTCCEEEEECCCCTTEE---EEEEEEEE-----TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred EEeccCcceeeeecCCCCCC---EEEEEEcC-----CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE
Confidence 44444544433322366655 555 8999 799999999887 578888876110 112356778999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 194 GVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 194 ~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+++|+|+|.+||+|+.|++|+|||+++++
T Consensus 274 ~~~~Spdg~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 274 SMDVDMKGELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred eEEECCCCCceEEEcCCCEEEEEECCCCc
Confidence 99999999999999999999999998865
No 57
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1e-18 Score=147.35 Aligned_cols=145 Identities=12% Similarity=0.149 Sum_probs=113.4
Q ss_pred cccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEE--EEeecccccCCCC-eEEEEEeCCCe
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCL--SWRSWISREARDP-TLLVNIAANAV 114 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l--~~~~~~~~~~~~~-~~l~~~~~~~~ 114 (223)
.+|.+.|.++.|++.+.+.... .+..| ..+|.++ .|+ +++ .+|++++.|+
T Consensus 263 ~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H-~~~V~sv~~~~s-------~~g~~~laS~S~D~- 333 (524)
T 2j04_B 263 SLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVH-DSYILSVSTAYS-------DFEDTVVSTVAVDG- 333 (524)
T ss_dssp CCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECS-SSCEEEEEEECC-------TTSCCEEEEEETTS-
T ss_pred EcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecc-cccEEEEEEEcC-------CCCCeEEEEeccCC-
Confidence 3567788888887644332111 24455 7899999 466 777 8999999999
Q ss_pred EEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEE
Q psy3599 115 CILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLG 194 (223)
Q Consensus 115 ~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 194 (223)
.+++||+.++..+... .+|.........+|+| ++..+++++.|+.|++||++. +.++..+.+|...|++
T Consensus 334 -tvklWD~~~~~~~~~~--~~~~~~~~v~~v~fsp-----~~~~l~s~~~d~tv~lwd~~~---~~~~~~l~gH~~~V~s 402 (524)
T 2j04_B 334 -YFYIFNPKDIATTKTT--VSRFRGSNLVPVVYCP-----QIYSYIYSDGASSLRAVPSRA---AFAVHPLVSRETTITA 402 (524)
T ss_dssp -EEEEECGGGHHHHCEE--EEECSCCSCCCEEEET-----TTTEEEEECSSSEEEEEETTC---TTCCEEEEECSSCEEE
T ss_pred -eEEEEECCCCCccccc--ccccccCcccceEeCC-----CcCeEEEeCCCCcEEEEECcc---cccceeeecCCCceEE
Confidence 9999999877554432 2554321102337999 788999999999999999999 8888889999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 195 VSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 195 v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
++|+|++..|++|+.|++|++||+..
T Consensus 403 va~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 403 IGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EECCSSCCBCEEEETTTEEECCBSCS
T ss_pred EEeCCCCCeEEEEECCCEEEEEechH
Confidence 99999999999999999999999754
No 58
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.79 E-value=8.5e-18 Score=146.11 Aligned_cols=145 Identities=17% Similarity=0.218 Sum_probs=117.1
Q ss_pred ccccCCcEEEEEECCC-Cceeeee-----------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEe
Q psy3599 55 QLRSTGVIVSILCDDL-GRLSKGK-----------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIA 110 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~-~~~~~~~-----------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~ 110 (223)
+.+|.+.|.++.++++ ++++.+. .+..| ...|.+++|+ +++.+|++++
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h-~~~v~~v~~s-------~~g~~l~sgs 449 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH-SHFVEDVVLS-------SDGQFALSGS 449 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECC-SSCEEEEEEC-------TTSSEEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCC-CCcEEEEEEC-------CCCCEEEEEe
Confidence 3478899999998874 3444332 23445 7899999999 9999999999
Q ss_pred CCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccccc---ceeec
Q psy3599 111 ANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNA---VNKLQ 186 (223)
Q Consensus 111 ~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~---~~~~~ 186 (223)
.|+ .+++||+.++..+.. + .+|... +.+ +|+| ++.+|++|+.|+.|++||... ... .....
T Consensus 450 ~Dg--~v~vwd~~~~~~~~~-~-~~h~~~---v~~~~~s~-----~~~~l~s~s~D~~i~iwd~~~---~~~~~~~~~~~ 514 (694)
T 3dm0_A 450 WDG--ELRLWDLAAGVSTRR-F-VGHTKD---VLSVAFSL-----DNRQIVSASRDRTIKLWNTLG---ECKYTISEGGE 514 (694)
T ss_dssp TTS--EEEEEETTTTEEEEE-E-ECCSSC---EEEEEECT-----TSSCEEEEETTSCEEEECTTS---CEEEEECSSTT
T ss_pred CCC--cEEEEECCCCcceeE-E-eCCCCC---EEEEEEeC-----CCCEEEEEeCCCEEEEEECCC---CcceeeccCCC
Confidence 999 999999998876654 3 489888 555 8999 799999999999999999865 322 22235
Q ss_pred ccccCEEEEEEecCC--CEEEEEeCCCcEEEeeCCCCC
Q psy3599 187 GHACPVLGVSFNYDE--SLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 187 ~h~~~v~~v~~~~~~--~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|...|.+++|+|++ ..+++++.|++|++||+++++
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK 552 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc
Confidence 789999999999986 689999999999999998754
No 59
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.79 E-value=6.3e-18 Score=133.40 Aligned_cols=124 Identities=15% Similarity=0.171 Sum_probs=103.9
Q ss_pred eeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCce---EEeeeeeccccCcceeEEE-eeecCcccC
Q psy3599 79 LVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAV---QLKRKFNVNHKSSKYQVRS-TFCPIMSFR 154 (223)
Q Consensus 79 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~---~~~~~~~~~h~~~~~~i~~-~~s~~~~~~ 154 (223)
+.+| ...|++++|+ +++.+|++++.++ .+++||..++. .....+ .+|... +.+ +|+|..
T Consensus 7 ~~gH-~~~v~~~~~~-------~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~-~~~~~~---v~~~~~~~~~--- 69 (351)
T 3f3f_A 7 DSGH-DDLVHDVVYD-------FYGRHVATCSSDQ--HIKVFKLDKDTSNWELSDSW-RAHDSS---IVAIDWASPE--- 69 (351)
T ss_dssp ECCC-SSCEEEEEEC-------SSSSEEEEEETTS--EEEEEEECSSSCCEEEEEEE-ECCSSC---EEEEEECCGG---
T ss_pred Cccc-ccceeEEEEc-------CCCCEEEEeeCCC--eEEEEECCCCCCcceeccee-ccCCCc---EEEEEEcCCC---
Confidence 4566 8999999999 9999999999999 89999987652 223333 378887 555 898821
Q ss_pred CCcEEEEecCCCcEEEEEcccCccc---------ccceeecccccCEEEEEEecC--CCEEEEEeCCCcEEEeeCCCCC
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHK---------NAVNKLQGHACPVLGVSFNYD--ESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~---------~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++.+|++|+.||.|++||++. + +++..+.+|...|.+++|+|+ +.+|++++.||.|++||+++++
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDP---DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECT---TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CCCEEEEEcCCCeEEEEecCC---CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 288999999999999999987 4 457788899999999999999 9999999999999999998764
No 60
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.79 E-value=1.8e-17 Score=131.11 Aligned_cols=149 Identities=15% Similarity=0.223 Sum_probs=120.2
Q ss_pred ccccCCcEEEEEECCCCceeeee-----------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEE
Q psy3599 55 QLRSTGVIVSILCDDLGRLSKGK-----------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCIL 117 (223)
Q Consensus 55 ~~~~~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v 117 (223)
+.+|.+.|.++.|+++|+++.+. .........+..+.++ +++.+|++++.|+ .+
T Consensus 82 l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~s~s~d~--~~ 152 (340)
T 4aow_A 82 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS-------SDNRQIVSGSRDK--TI 152 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC-------TTSSCEEEEETTS--CE
T ss_pred EeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEe-------ecCccceeecCCC--eE
Confidence 34788999999999998877543 1111225677788888 8899999999998 89
Q ss_pred EEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEE
Q psy3599 118 KVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVS 196 (223)
Q Consensus 118 ~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 196 (223)
++||........... .+|... +.+ .|++.. ...++++++.|+.|++||+++ ++++..+.+|...|.+++
T Consensus 153 ~~~d~~~~~~~~~~~-~~~~~~---v~~~~~~~~~---~~~~~~s~~~d~~i~i~d~~~---~~~~~~~~~h~~~v~~~~ 222 (340)
T 4aow_A 153 KLWNTLGVCKYTVQD-ESHSEW---VSCVRFSPNS---SNPIIVSCGWDKLVKVWNLAN---CKLKTNHIGHTGYLNTVT 222 (340)
T ss_dssp EEECTTSCEEEEECS-SSCSSC---EEEEEECSCS---SSCEEEEEETTSCEEEEETTT---TEEEEEECCCSSCEEEEE
T ss_pred EEEEeCCCceEEEEe-ccccCc---ccceEEccCC---CCcEEEEEcCCCEEEEEECCC---CceeeEecCCCCcEEEEE
Confidence 999988765544333 477777 444 676631 356889999999999999999 889999999999999999
Q ss_pred EecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 197 FNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 197 ~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|+|++.+|++|+.|+.|++||+++.+
T Consensus 223 ~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 223 VSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp ECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred ECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 99999999999999999999998754
No 61
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.79 E-value=2.2e-18 Score=141.99 Aligned_cols=145 Identities=19% Similarity=0.185 Sum_probs=113.0
Q ss_pred cccCCcEEEEEECC-CCceeeee-----------------eeeecC--CCCeeEEEEeecccccCCCCeEEEEEeCCCeE
Q psy3599 56 LRSTGVIVSILCDD-LGRLSKGK-----------------RLVLSQ--DCPITCLSWRSWISREARDPTLLVNIAANAVC 115 (223)
Q Consensus 56 ~~~~~~i~~~~~~~-~~~~~~~~-----------------~~~~~~--~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (223)
.+|.+.|.++.|+| ++.++.+. .+..++ ...+.+++|+ +++.+|++++.++
T Consensus 161 ~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~g~~dg-- 231 (435)
T 4e54_B 161 IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVS-------ASSRMVVTGDNVG-- 231 (435)
T ss_dssp CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEE-------TTTTEEEEECSSS--
T ss_pred cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEEC-------CCCCEEEEEeCCC--
Confidence 36888999999997 56555433 111111 3357889999 9999999999999
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccc---eeecccccC
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAV---NKLQGHACP 191 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~---~~~~~h~~~ 191 (223)
.+++||..+. .+. .+ .+|... +.+ .|+|. ...++++|+.|+.|++||+++ .+.. ....+|...
T Consensus 232 ~i~~wd~~~~-~~~-~~-~~h~~~---v~~v~~~p~----~~~~~~s~s~d~~v~iwd~~~---~~~~~~~~~~~~h~~~ 298 (435)
T 4e54_B 232 NVILLNMDGK-ELW-NL-RMHKKK---VTHVALNPC----CDWFLATASVDQTVKIWDLRQ---VRGKASFLYSLPHRHP 298 (435)
T ss_dssp BEEEEESSSC-BCC-CS-BCCSSC---EEEEEECTT----CSSEEEEEETTSBCCEEETTT---CCSSSCCSBCCBCSSC
T ss_pred cEeeeccCcc-eeE-EE-ecccce---EEeeeecCC----CceEEEEecCcceeeEEeccc---ccccceEEEeeecccc
Confidence 8999998754 333 33 488887 555 89994 356899999999999999987 4433 344679999
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 192 VLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 192 v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|.+++|+|++.+|++++.||.|++||+++++
T Consensus 299 v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 299 VNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp EEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred ccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 9999999999999999999999999998754
No 62
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.79 E-value=2.3e-17 Score=129.37 Aligned_cols=145 Identities=14% Similarity=0.251 Sum_probs=107.9
Q ss_pred ccCCcEEEEEECCCCceeeee----------------------eeeecCCCCeeEEEEeecccccCCCCeEEE--EEeCC
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK----------------------RLVLSQDCPITCLSWRSWISREARDPTLLV--NIAAN 112 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~--~~~~~ 112 (223)
+|.+.+..+.+.++++.+.+. ....+ ...|.++.++ +.++.++. +++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~------~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 148 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWC------PWQSNVLATGGGTSD 220 (318)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCC-CSCEEEEEEC------TTSTTEEEEEECTTT
T ss_pred CccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeeccc-CCceEEEEec------CCCCcEEEEEecCCC
Confidence 566677777777766655332 11122 5678899998 23344443 44566
Q ss_pred CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEE--ecCCCcEEEEEcccCcccccceeeccccc
Q psy3599 113 AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVT--GSEDSCVYFLDIQSKEHKNAVNKLQGHAC 190 (223)
Q Consensus 113 ~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~s--gs~dg~v~iwd~~~~~~~~~~~~~~~h~~ 190 (223)
+ .+++||......... ..+.... ....|+| ++..+++ |+.|+.|++||+++ ++++..+++|..
T Consensus 221 ~--~i~lwd~~~~~~~~~---~~~~~~v--~~~~~~~-----~~~~~~~~sg~~d~~i~iwd~~~---~~~~~~l~gH~~ 285 (318)
T 4ggc_A 221 R--HIRIWNVCSGACLSA---VDAHSQV--CSILWSP-----HYKELISGHGFAQNQLVIWKYPT---MAKVAELKGHTS 285 (318)
T ss_dssp C--EEEEEETTTCCEEEE---EECSSCE--EEEEEET-----TTTEEEEEECTTTCCEEEEETTT---CCEEEEECCCSS
T ss_pred C--EEEEEeccccccccc---ccceeee--eeeeecc-----cccceEEEEEcCCCEEEEEECCC---CcEEEEEcCCCC
Confidence 6 899999987765543 2445553 3347888 4665554 45899999999999 899999999999
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEeeCCCCCC
Q psy3599 191 PVLGVSFNYDESLLATSDYQGLIILWSREKHEP 223 (223)
Q Consensus 191 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 223 (223)
.|++++|+|++.+|+|||.||+|+|||+...+|
T Consensus 286 ~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 286 RVLSLTMSPDGATVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp CEEEEEECTTSSCEEEEETTTEEEEECCSCCCC
T ss_pred CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCC
Confidence 999999999999999999999999999998877
No 63
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.78 E-value=8.6e-18 Score=136.81 Aligned_cols=146 Identities=15% Similarity=0.210 Sum_probs=119.7
Q ss_pred cccCCcEEEEEECC-CCceeeee-------------------------eeeecCCCCeeEEEEeecccccCCCC-eEEEE
Q psy3599 56 LRSTGVIVSILCDD-LGRLSKGK-------------------------RLVLSQDCPITCLSWRSWISREARDP-TLLVN 108 (223)
Q Consensus 56 ~~~~~~i~~~~~~~-~~~~~~~~-------------------------~~~~~~~~~i~~l~~~~~~~~~~~~~-~~l~~ 108 (223)
.+|.+.|.++.|+| ++.++.+. .+..| ...|.+++|+ +++ .+|++
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~-------p~~~~~l~s 149 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWH-------PTAQNVLLS 149 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEEC-------SSBTTEEEE
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEEC-------cCCCCEEEE
Confidence 46788888888888 66665433 22335 7899999999 887 69999
Q ss_pred EeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceee-c
Q psy3599 109 IAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKL-Q 186 (223)
Q Consensus 109 ~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~ 186 (223)
++.|+ .+++||+.++..+......+|... +.+ +|+| ++.+|++++.||.|++||+++ ++.+..+ .
T Consensus 150 ~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~---v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~ 216 (402)
T 2aq5_A 150 AGCDN--VILVWDVGTGAAVLTLGPDVHPDT---IYSVDWSR-----DGALICTSCRDKRVRVIEPRK---GTVVAEKDR 216 (402)
T ss_dssp EETTS--CEEEEETTTTEEEEEECTTTCCSC---EEEEEECT-----TSSCEEEEETTSEEEEEETTT---TEEEEEEEC
T ss_pred EcCCC--EEEEEECCCCCccEEEecCCCCCc---eEEEEECC-----CCCEEEEEecCCcEEEEeCCC---Cceeeeecc
Confidence 99988 899999998876654311267777 555 8999 799999999999999999999 8888888 7
Q ss_pred ccccC-EEEEEEecCCCEEEEE---eCCCcEEEeeCCCCC
Q psy3599 187 GHACP-VLGVSFNYDESLLATS---DYQGLIILWSREKHE 222 (223)
Q Consensus 187 ~h~~~-v~~v~~~~~~~~l~s~---s~d~~i~iwd~~~~~ 222 (223)
+|... +.++.|+|++.+|++| +.|+.|++||+++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 217 PHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp SSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 88775 8999999999999999 789999999998753
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.78 E-value=1.8e-17 Score=132.19 Aligned_cols=99 Identities=19% Similarity=0.333 Sum_probs=78.1
Q ss_pred cccCCcEEEEEECCC---Cceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCC
Q psy3599 56 LRSTGVIVSILCDDL---GRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAAN 112 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~---~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~ 112 (223)
.+|.+.|.++.|+|+ |+++.+. .+..| ..+|.+++|+ +++.+|++++.+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~-------~~~~~l~s~~~d 107 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH-TGPVLDVCWS-------DDGSKVFTASCD 107 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC-SSCEEEEEEC-------TTSSEEEEEETT
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc-cCCEEEEEEC-------cCCCEEEEEcCC
Confidence 367788888888886 4655332 23445 8899999999 999999999999
Q ss_pred CeEEEEEecCCCceEEeeeeeccccCcceeEEE-ee--ecCcccCCCcEEEEecCCCcEEEEEccc
Q psy3599 113 AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TF--CPIMSFREGACVVTGSEDSCVYFLDIQS 175 (223)
Q Consensus 113 ~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~--s~~~~~~~~~~l~sgs~dg~v~iwd~~~ 175 (223)
+ .+++||..++..+.. .+|... +.+ .| +| ++.++++++.||.|++||+++
T Consensus 108 g--~v~iwd~~~~~~~~~---~~~~~~---v~~~~~~~~~-----~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 108 K--TAKMWDLSSNQAIQI---AQHDAP---VKTIHWIKAP-----NYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp S--EEEEEETTTTEEEEE---EECSSC---EEEEEEEECS-----SCEEEEEEETTSEEEEECSSC
T ss_pred C--cEEEEEcCCCCceee---ccccCc---eEEEEEEeCC-----CCCEEEEccCCCcEEEEECCC
Confidence 9 999999998876653 478777 555 77 66 688899999999999999765
No 65
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.4e-17 Score=136.70 Aligned_cols=148 Identities=15% Similarity=0.146 Sum_probs=114.9
Q ss_pred cccCCcEEEEEECC-CCceeeee----------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCC
Q psy3599 56 LRSTGVIVSILCDD-LGRLSKGK----------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAAN 112 (223)
Q Consensus 56 ~~~~~~i~~~~~~~-~~~~~~~~----------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~ 112 (223)
.+|.+.|.+++|+| +++++.+. .....+..+|.+++|+ +++.+|++++.|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~-------~~~~~l~s~s~d 132 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMI-------PNFDAFAVSSKD 132 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEEC-------TTSSEEEEEETT
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEe-------CCCCEEEEEeCC
Confidence 35788999999999 88776543 1121338899999999 899999999999
Q ss_pred CeEEEEEecCC---CceEEeee-------eec-c--ccCcceeEEEe--eecCcccCCCcEEEEecCCCcEEEEEcccCc
Q psy3599 113 AVCILKVLDKE---GAVQLKRK-------FNV-N--HKSSKYQVRST--FCPIMSFREGACVVTGSEDSCVYFLDIQSKE 177 (223)
Q Consensus 113 ~~~~v~i~d~~---~~~~~~~~-------~~~-~--h~~~~~~i~~~--~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~ 177 (223)
+ .+++||+. .+..+... +.. . +.... +... +++ ++.++++|+.|+.|++||+++
T Consensus 133 g--~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~-- 201 (437)
T 3gre_A 133 G--QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYA--VRMRAFVNE-----EKSLLVALTNLSRVIIFDIRT-- 201 (437)
T ss_dssp S--EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCE--EEEEEEECS-----SCEEEEEEETTSEEEEEETTT--
T ss_pred C--EEEEEEeccccCCceeeccccceeEEEEccCcccccCc--eEEEEEEcC-----CCCEEEEEeCCCeEEEEeCCC--
Confidence 9 89999984 33222211 000 0 22232 2223 455 789999999999999999999
Q ss_pred ccccceeecc--cccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 178 HKNAVNKLQG--HACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 178 ~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++++..+.+ |...|.+++|+|++.+|++|+.||.|++||+++++
T Consensus 202 -~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 202 -LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp -CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred -CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 888998888 88999999999999999999999999999998754
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.78 E-value=1.1e-17 Score=134.01 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=114.7
Q ss_pred ccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+|.+.|.++.|+++++++.+. .+..| ...|.+++|+ +++.+|++++.++ .
T Consensus 50 ~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~~~-------~~~~~l~~~~~d~--~ 119 (372)
T 1k8k_C 50 EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI-NRAARCVRWA-------PNEKKFAVGSGSR--V 119 (372)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCC-SSCEEEEEEC-------TTSSEEEEEETTS--S
T ss_pred CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecC-CCceeEEEEC-------CCCCEEEEEeCCC--E
Confidence 566777777777766655332 11223 7789999999 9999999999888 7
Q ss_pred EEEecCCCceE--EeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcc------------------c
Q psy3599 117 LKVLDKEGAVQ--LKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQ------------------S 175 (223)
Q Consensus 117 v~i~d~~~~~~--~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~------------------~ 175 (223)
+++||...+.. ....+..+|... +.+ .|+| ++.++++|+.||.|++||++ .
T Consensus 120 v~i~d~~~~~~~~~~~~~~~~~~~~---i~~~~~~~-----~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (372)
T 1k8k_C 120 ISICYFEQENDWWVCKHIKKPIRST---VLSLDWHP-----NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPF 191 (372)
T ss_dssp EEEEEEETTTTEEEEEEECTTCCSC---EEEEEECT-----TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCT
T ss_pred EEEEEecCCCcceeeeeeecccCCC---eeEEEEcC-----CCCEEEEEcCCCCEEEEEcccccccccccccccccccch
Confidence 89999876542 111222367666 555 8999 79999999999999999964 4
Q ss_pred CcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 176 KEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 176 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++++..+.+|...|.+++|+|++.+|++++.|+.|++||+++++
T Consensus 192 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 192 ---GELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp ---TCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred ---hhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 67788888999999999999999999999999999999998765
No 67
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.78 E-value=1.1e-17 Score=133.44 Aligned_cols=122 Identities=18% Similarity=0.303 Sum_probs=104.7
Q ss_pred eeeecCCCCeeEEEEeecccccCCC---CeEEEEEeCCCeEEEEEecCCC-ceEEeeeeeccccCcceeEEE-eeecCcc
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARD---PTLLVNIAANAVCILKVLDKEG-AVQLKRKFNVNHKSSKYQVRS-TFCPIMS 152 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~---~~~l~~~~~~~~~~v~i~d~~~-~~~~~~~~~~~h~~~~~~i~~-~~s~~~~ 152 (223)
.+..| ...|++++|+ ++ +.+|++++.++ .+++||..+ +..+...+. +|... +.+ .|+|
T Consensus 34 ~~~~h-~~~v~~~~~~-------~~~~~g~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~-~h~~~---v~~~~~~~--- 96 (368)
T 3mmy_A 34 VTSSP-DDSIGCLSFS-------PPTLPGNFLIAGSWAN--DVRCWEVQDSGQTIPKAQQ-MHTGP---VLDVCWSD--- 96 (368)
T ss_dssp CSSCC-SSCEEEEEEC-------CTTSSSEEEEEEETTS--EEEEEEECTTSCEEEEEEE-ECSSC---EEEEEECT---
T ss_pred eccCC-CCceEEEEEc-------CCCCCceEEEEECCCC--cEEEEEcCCCCceeEEEec-cccCC---EEEEEECc---
Confidence 55666 8999999999 77 69999999999 899999986 555544553 88888 555 8999
Q ss_pred cCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEE--ecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 153 FREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSF--NYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 153 ~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++.+|++|+.||.|++||+.+ ++.+. +..|...|.++.| +|++.+|++++.|+.|++||+++++
T Consensus 97 --~~~~l~s~~~dg~v~iwd~~~---~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 97 --DGSKVFTASCDKTAKMWDLSS---NQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp --TSSEEEEEETTSEEEEEETTT---TEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred --CCCEEEEEcCCCcEEEEEcCC---CCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 799999999999999999998 66555 5569999999999 8899999999999999999998765
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.77 E-value=1.5e-17 Score=136.59 Aligned_cols=118 Identities=12% Similarity=0.184 Sum_probs=94.6
Q ss_pred CCeeEEEEeecccccCCCC--eEEEEEeCCCeEEEEEecCCCceEEe---------------------------------
Q psy3599 85 CPITCLSWRSWISREARDP--TLLVNIAANAVCILKVLDKEGAVQLK--------------------------------- 129 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~--~~l~~~~~~~~~~v~i~d~~~~~~~~--------------------------------- 129 (223)
.+|++++|+ +++ .+|++++.|+ .+++|+..++....
T Consensus 94 ~~V~~l~~~-------~~~~~~~l~s~s~d~--~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 164 (447)
T 3dw8_B 94 EKINKIRWL-------PQKNAAQFLLSTNDK--TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMV 164 (447)
T ss_dssp CCCCEEEEC-------CCCSSSEEEEEECSS--CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEE
T ss_pred CceEEEEEc-------CCCCcceEEEeCCCC--eEEEEecccccCCcceecccCccccccCcccccceEeccccchheee
Confidence 789999999 777 7888889888 89999987643311
Q ss_pred -----eeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccce-------eecccccCEEEEE
Q psy3599 130 -----RKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVN-------KLQGHACPVLGVS 196 (223)
Q Consensus 130 -----~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~-------~~~~h~~~v~~v~ 196 (223)
..+..+|... +.+ +|+| ++.+|++| .|+.|++||++.. ..++. .+.+|...|.+++
T Consensus 165 ~~~~~~~~~~~h~~~---v~~~~~~~-----~~~~l~s~-~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~ 233 (447)
T 3dw8_B 165 EASPRRIFANAHTYH---INSISINS-----DYETYLSA-DDLRINLWHLEIT--DRSFNIVDIKPANMEELTEVITAAE 233 (447)
T ss_dssp EEEEEEEECSCCSSC---CCEEEECT-----TSSEEEEE-CSSEEEEEETTEE--EEEEEEEECCCSSGGGCCCCEEEEE
T ss_pred eccceEEeccCCCcc---eEEEEEcC-----CCCEEEEe-CCCeEEEEECCCC--CceeeeeecccccccccCcceEEEE
Confidence 0111367777 444 8999 79999998 7999999999941 34443 4678999999999
Q ss_pred EecCC-CEEEEEeCCCcEEEeeCCCCC
Q psy3599 197 FNYDE-SLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 197 ~~~~~-~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|+|++ .+|++|+.||.|++||+++++
T Consensus 234 ~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 234 FHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred ECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 99998 999999999999999998765
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3e-17 Score=133.26 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=117.0
Q ss_pred ccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILK 118 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 118 (223)
.|.+.|..+.|+++++.+.+. .+..| ...|.++.|+ +++ +|++++.++ .++
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~-------~~~-~l~~~~~d~--~i~ 313 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH-SQSIVSASWV-------GDD-KVISCSMDG--SVR 313 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCC-SSCEEEEEEE-------TTT-EEEEEETTS--EEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCC-CccEEEEEEC-------CCC-EEEEEeCCC--cEE
Confidence 577888888998877665433 23334 7899999999 888 889999999 899
Q ss_pred EecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccc-----------------
Q psy3599 119 VLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKN----------------- 180 (223)
Q Consensus 119 i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~----------------- 180 (223)
+||..++..+.. + ..|... +.+ .|+| ++.+|++++.||.|++||+.+ .+
T Consensus 314 i~d~~~~~~~~~-~-~~~~~~---i~~~~~s~-----~~~~l~~~~~dg~i~i~~~~~---~~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 314 LWSLKQNTLLAL-S-IVDGVP---IFAGRISQ-----DGQKYAVAFMDGQVNVYDLKK---LNSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp EEETTTTEEEEE-E-ECTTCC---EEEEEECT-----TSSEEEEEETTSCEEEEECHH---HHC--------------CE
T ss_pred EEECCCCcEeEe-c-ccCCcc---EEEEEEcC-----CCCEEEEEECCCeEEEEECCC---CccceeeeecccccccCcc
Confidence 999998876654 3 367666 555 8999 799999999999999999998 77
Q ss_pred ---cceeeccccc--CEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 181 ---AVNKLQGHAC--PVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 181 ---~~~~~~~h~~--~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
++..+.+|.. .|.+++|+|++.+|++++.||.|++||++
T Consensus 381 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 381 PIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 7888999976 99999999999999999999999999986
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.77 E-value=3.1e-17 Score=131.29 Aligned_cols=121 Identities=15% Similarity=0.179 Sum_probs=99.5
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
.+..| ...|.+++|+ +++.+|++++.++ .+++||..++.........+|... +.+ .|+| ++
T Consensus 47 ~~~~h-~~~v~~~~~~-------~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~---v~~~~~~~-----~~ 108 (372)
T 1k8k_C 47 ELKEH-NGQVTGVDWA-------PDSNRIVTCGTDR--NAYVWTLKGRTWKPTLVILRINRA---ARCVRWAP-----NE 108 (372)
T ss_dssp EEECC-SSCEEEEEEE-------TTTTEEEEEETTS--CEEEEEEETTEEEEEEECCCCSSC---EEEEEECT-----TS
T ss_pred eecCC-CCcccEEEEe-------CCCCEEEEEcCCC--eEEEEECCCCeeeeeEEeecCCCc---eeEEEECC-----CC
Confidence 34455 8899999999 8999999999988 899999987764433222367666 555 8999 79
Q ss_pred cEEEEecCCCcEEEEEcccCccccc---ce-eecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKNA---VN-KLQGHACPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~~---~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
.++++|+.|+.|++||+.. ... .. ...+|...|.+++|+|++.+|++++.|+.|++||++
T Consensus 109 ~~l~~~~~d~~v~i~d~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 109 KKFAVGSGSRVISICYFEQ---ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp SEEEEEETTSSEEEEEEET---TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred CEEEEEeCCCEEEEEEecC---CCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 9999999999999999998 442 23 336788999999999999999999999999999964
No 71
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.77 E-value=8e-17 Score=127.00 Aligned_cols=141 Identities=18% Similarity=0.267 Sum_probs=117.0
Q ss_pred ccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILK 118 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 118 (223)
.+.+.|..+.++++++.+... .+..| ...|.+++|+ +++.+|++++.++ .++
T Consensus 139 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~-~~~i~~~~~~-------~~~~~l~~~~~dg--~i~ 208 (337)
T 1gxr_A 139 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDIS-------NDGTKLWTGGLDN--TVR 208 (337)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTS--EEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc-cCceEEEEEC-------CCCCEEEEEecCC--cEE
Confidence 566778888888877655332 23344 7899999999 8999999999999 899
Q ss_pred EecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEE
Q psy3599 119 VLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSF 197 (223)
Q Consensus 119 i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 197 (223)
+||..++..+.. ..+... +.+ .|+| ++.++++++.|+.|++||+++ .+. ..+..|...|.+++|
T Consensus 209 ~~d~~~~~~~~~---~~~~~~---v~~~~~s~-----~~~~l~~~~~~~~i~~~~~~~---~~~-~~~~~~~~~v~~~~~ 273 (337)
T 1gxr_A 209 SWDLREGRQLQQ---HDFTSQ---IFSLGYCP-----TGEWLAVGMESSNVEVLHVNK---PDK-YQLHLHESCVLSLKF 273 (337)
T ss_dssp EEETTTTEEEEE---EECSSC---EEEEEECT-----TSSEEEEEETTSCEEEEETTS---SCE-EEECCCSSCEEEEEE
T ss_pred EEECCCCceEee---ecCCCc---eEEEEECC-----CCCEEEEEcCCCcEEEEECCC---CCe-EEEcCCccceeEEEE
Confidence 999998876654 355555 555 8999 799999999999999999998 553 467789999999999
Q ss_pred ecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 198 NYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 198 ~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|++.+|++++.||.|++||+++++
T Consensus 274 ~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCEEEEecCCCcEEEEECCCCe
Confidence 9999999999999999999998765
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.4e-17 Score=140.48 Aligned_cols=120 Identities=13% Similarity=0.021 Sum_probs=97.5
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCC-cEEEEe
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREG-ACVVTG 162 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~-~~l~sg 162 (223)
...|++++|+ +++ .|++|+.|+ .+++||+.++......+ .+|...+..+...|+| ++ .+|+||
T Consensus 266 ~~~v~sv~~s-------~~~-~lasgs~Dg--tV~lWD~~~~~~~~~~~-~~H~~~V~sv~~~~s~-----~g~~~laS~ 329 (524)
T 2j04_B 266 DSLITTFDFL-------SPT-TVVCGFKNG--FVAEFDLTDPEVPSFYD-QVHDSYILSVSTAYSD-----FEDTVVSTV 329 (524)
T ss_dssp TTCEEEEEES-------SSS-EEEEEETTS--EEEEEETTBCSSCSEEE-ECSSSCEEEEEEECCT-----TSCCEEEEE
T ss_pred CCCEEEEEec-------CCC-eEEEEeCCC--EEEEEECCCCCCceEEe-ecccccEEEEEEEcCC-----CCCeEEEEe
Confidence 5789999998 554 799999999 99999998764333334 3898885323224666 66 899999
Q ss_pred cCCCcEEEEEcccCcccccceeeccccc--CEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 163 SEDSCVYFLDIQSKEHKNAVNKLQGHAC--PVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 163 s~dg~v~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+.|++|++||+++ ++++..+.+|.. .|.+++|+|++..+++++.|++|++||++++.
T Consensus 330 S~D~tvklWD~~~---~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 330 AVDGYFYIFNPKD---IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF 388 (524)
T ss_dssp ETTSEEEEECGGG---HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT
T ss_pred ccCCeEEEEECCC---CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc
Confidence 9999999999999 888888877754 47899999999999999999999999998764
No 73
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.77 E-value=4.9e-17 Score=131.27 Aligned_cols=145 Identities=19% Similarity=0.209 Sum_probs=113.1
Q ss_pred ccCCcEEEEEECC-CCceeeee-----------------eeeecC--CCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 57 RSTGVIVSILCDD-LGRLSKGK-----------------RLVLSQ--DCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 57 ~~~~~i~~~~~~~-~~~~~~~~-----------------~~~~~~--~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+|.+.|.++.|+| ++.++.+. .+..+. ...|.+++|+ +++.+|++++.++ .
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~-------~~~~~l~~~~~d~--~ 186 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVS-------VSRQMLATGDSTG--R 186 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEE-------TTTTEEEEEETTS--E
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEEC-------CCCCEEEEECCCC--C
Confidence 5778888888888 55555433 112221 3679999999 9999999999999 9
Q ss_pred EEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCc-EEEEecCCCcEEEEEcccCcc-cccceeecccccCEE
Q psy3599 117 LKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGA-CVVTGSEDSCVYFLDIQSKEH-KNAVNKLQGHACPVL 193 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~-~l~sgs~dg~v~iwd~~~~~~-~~~~~~~~~h~~~v~ 193 (223)
+++||+. +..+.. + .+|... +.+ +|+| ++. ++++|+.|+.|++||+++... ..++..+ +|...|.
T Consensus 187 i~i~d~~-~~~~~~-~-~~h~~~---v~~~~~~~-----~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~ 254 (383)
T 3ei3_B 187 LLLLGLD-GHEIFK-E-KLHKAK---VTHAEFNP-----RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVN 254 (383)
T ss_dssp EEEEETT-SCEEEE-E-ECSSSC---EEEEEECS-----SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEE
T ss_pred EEEEECC-CCEEEE-e-ccCCCc---EEEEEECC-----CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceE
Confidence 9999995 444443 3 478877 555 8999 576 999999999999999987211 2344444 6999999
Q ss_pred EEEEec-CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 194 GVSFNY-DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 194 ~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+++|+| ++.+|++++.|+.|++||+++++
T Consensus 255 ~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 255 AAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp EEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred EEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 999999 99999999999999999998764
No 74
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.77 E-value=2e-17 Score=134.80 Aligned_cols=107 Identities=19% Similarity=0.260 Sum_probs=96.3
Q ss_pred CCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccc
Q psy3599 101 RDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHK 179 (223)
Q Consensus 101 ~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~ 179 (223)
+++.+|++++.++ .+++||..++.... .+ .+|... +.+ +|+| ++.+|++|+.|+.|++||+.+ +
T Consensus 107 ~~~~~l~~~~~dg--~i~iwd~~~~~~~~-~~-~~h~~~---v~~~~~~~-----~~~~l~s~s~d~~i~iwd~~~---~ 171 (420)
T 3vl1_A 107 LQMRRFILGTTEG--DIKVLDSNFNLQRE-ID-QAHVSE---ITKLKFFP-----SGEALISSSQDMQLKIWSVKD---G 171 (420)
T ss_dssp SSSCEEEEEETTS--CEEEECTTSCEEEE-ET-TSSSSC---EEEEEECT-----TSSEEEEEETTSEEEEEETTT---C
T ss_pred cCCCEEEEEECCC--CEEEEeCCCcceee-ec-ccccCc---cEEEEECC-----CCCEEEEEeCCCeEEEEeCCC---C
Confidence 8999999999998 89999999886554 33 388887 666 8999 799999999999999999999 8
Q ss_pred ccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 180 NAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 180 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+.+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 8899999999999999999999999999999999999998764
No 75
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.8e-17 Score=135.10 Aligned_cols=144 Identities=14% Similarity=0.093 Sum_probs=115.0
Q ss_pred ccCCcEEEEEECCCCcee-eee--------------------eeee-cCCCCeeEEEEeecccccCCCCeEEEEEeCCCe
Q psy3599 57 RSTGVIVSILCDDLGRLS-KGK--------------------RLVL-SQDCPITCLSWRSWISREARDPTLLVNIAANAV 114 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~-~~~--------------------~~~~-~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~ 114 (223)
++.+.|.++.|+|+++.+ .+. .+.. .+...|++++|+ +++.+|++++.++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s-------p~~~~l~~~~~~g- 171 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA-------EDDTTVIIADKFG- 171 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC-------TTSSEEEEEETTS-
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc-------CCCCEEEEEeCCC-
Confidence 456678888888887764 322 1110 125789999999 9999999999888
Q ss_pred EEEEEecCCCceEEe---eeeeccccCcceeEEE-eeecCcccCC---CcEEEEecCCCcEEEEEcccCccccccee-ec
Q psy3599 115 CILKVLDKEGAVQLK---RKFNVNHKSSKYQVRS-TFCPIMSFRE---GACVVTGSEDSCVYFLDIQSKEHKNAVNK-LQ 186 (223)
Q Consensus 115 ~~v~i~d~~~~~~~~---~~~~~~h~~~~~~i~~-~~s~~~~~~~---~~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~ 186 (223)
.+.+|++.++.... ..+ .+|... +.+ .|+| + +.+|++|+.|+.|++||+++ ++++.. +.
T Consensus 172 -~v~~~~~~~~~~~~~~~~~~-~~h~~~---v~~~~~sp-----~~~~~~~l~s~~~d~~i~vwd~~~---~~~~~~~~~ 238 (450)
T 2vdu_B 172 -DVYSIDINSIPEEKFTQEPI-LGHVSM---LTDVHLIK-----DSDGHQFIITSDRDEHIKISHYPQ---CFIVDKWLF 238 (450)
T ss_dssp -EEEEEETTSCCCSSCCCCCS-EECSSC---EEEEEEEE-----CTTSCEEEEEEETTSCEEEEEESC---TTCEEEECC
T ss_pred -cEEEEecCCcccccccceee-ecccCc---eEEEEEcC-----CCCCCcEEEEEcCCCcEEEEECCC---Cceeeeeec
Confidence 78888877654332 123 378777 666 8999 7 88999999999999999998 777776 56
Q ss_pred ccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 187 GHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 187 ~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|...|.+++|+ ++.+|++++.|+.|++||+++++
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 899999999999 99999999999999999998875
No 76
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.76 E-value=6.2e-17 Score=130.01 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=68.7
Q ss_pred cccCcceeEEE-eeecCcccCCCcEEEEecCCCc-EEEEEcccCcccccceeec-c-cccCEEEEEEecCCCEEEEEeCC
Q psy3599 135 NHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSC-VYFLDIQSKEHKNAVNKLQ-G-HACPVLGVSFNYDESLLATSDYQ 210 (223)
Q Consensus 135 ~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~-v~iwd~~~~~~~~~~~~~~-~-h~~~v~~v~~~~~~~~l~s~s~d 210 (223)
+|... +.+ +|+| ++.+|++|+.|+. |++||+++ ++++..+. + |...|.+++|+|++.+|++++.|
T Consensus 193 ~h~~~---v~~~~~s~-----~g~~l~s~s~d~~~v~iwd~~~---~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 193 AHTNP---IKMVRLNR-----KSDMVATCSQDGTIIRVFKTED---GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK 261 (355)
T ss_dssp CCSSC---EEEEEECT-----TSSEEEEEETTCSEEEEEETTT---CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT
T ss_pred ccCCc---eEEEEECC-----CCCEEEEEeCCCCEEEEEECCC---CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC
Confidence 56555 555 8999 7999999999998 99999999 88999998 5 99999999999999999999999
Q ss_pred CcEEEeeCCCC
Q psy3599 211 GLIILWSREKH 221 (223)
Q Consensus 211 ~~i~iwd~~~~ 221 (223)
++|++||++.+
T Consensus 262 ~~v~iw~~~~~ 272 (355)
T 3vu4_A 262 WTLHVFEIFND 272 (355)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEEccCC
Confidence 99999999764
No 77
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.8e-17 Score=132.82 Aligned_cols=123 Identities=13% Similarity=0.111 Sum_probs=104.0
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCC--CceEEeeeeeccccCcceeEEE-eeecCcccC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKE--GAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFR 154 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~--~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~ 154 (223)
.+..| ..+|++++|+ +++.+|++++.++ .+++|+.. ++..+. .+ .+|... +.+ .|+|..
T Consensus 6 ~~~~h-~~~v~~~~~s-------~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~-~~-~~h~~~---v~~~~~~~~~--- 67 (379)
T 3jrp_A 6 IANAH-NELIHDAVLD-------YYGKRLATCSSDK--TIKIFEVEGETHKLID-TL-TGHEGP---VWRVDWAHPK--- 67 (379)
T ss_dssp CEEEC-CCCEEEEEEC-------SSSSEEEEEETTS--CEEEEEEETTEEEEEE-EE-CCCSSC---EEEEEECCGG---
T ss_pred EecCC-cccEEEEEEc-------CCCCEEEEEECCC--cEEEEecCCCcceeee-Ee-cCCCCc---EEEEEeCCCC---
Confidence 45677 9999999999 9999999999888 89999987 333333 33 488877 555 888710
Q ss_pred CCcEEEEecCCCcEEEEEcccCcccc--cceeecccccCEEEEEEecC--CCEEEEEeCCCcEEEeeCCCC
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHKN--AVNKLQGHACPVLGVSFNYD--ESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd~~~~ 221 (223)
++.+|++|+.||.|++||+.+ ++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++.+
T Consensus 68 ~~~~l~s~~~dg~v~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 68 FGTILASCSYDGKVLIWKEEN---GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp GCSEEEEEETTSCEEEEEEET---TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEeccCCEEEEEEcCC---CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 289999999999999999998 65 67788889999999999999 999999999999999999875
No 78
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=3.8e-17 Score=130.42 Aligned_cols=144 Identities=13% Similarity=0.154 Sum_probs=108.1
Q ss_pred ccCCcEEEEEECC--CCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 57 RSTGVIVSILCDD--LGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 57 ~~~~~i~~~~~~~--~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
+|.+.|.++.++| +++++.+. ....++...|.+++|+ |++.+|++|+.|+ .
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~-------pdg~~lasg~~dg--~ 193 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH-------KDSLLLALYSPDG--I 193 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC-------TTSCEEEEECTTS--C
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC-------CCCCEEEEEcCCC--E
Confidence 4557788888888 77766433 1123435679999999 9999999999999 8
Q ss_pred EEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecc---cccCE
Q psy3599 117 LKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQG---HACPV 192 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~---h~~~v 192 (223)
+++||..++..+...+..+|... +.+ .|+| ++.+|++++ |+.|++||+++ .+.+..+.. |...+
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~---v~~l~fs~-----~g~~l~s~~-~~~v~iwd~~~---~~~~~~~~~~~~~~~~~ 261 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAK---IKEVKFAD-----NGYWMVVEC-DQTVVCFDLRK---DVGTLAYPTYTIPEFKT 261 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSC---EEEEEECT-----TSSEEEEEE-SSBEEEEETTS---STTCBSSCCCBC-----
T ss_pred EEEEECCCCCCCccEEeccCCCC---EEEEEEeC-----CCCEEEEEe-CCeEEEEEcCC---CCcceeecccccccccc
Confidence 99999998876633443238877 666 8999 799999999 45999999998 666555443 44444
Q ss_pred E--EEEEecCCCEEEEEeC-CCcEEEeeCCCC
Q psy3599 193 L--GVSFNYDESLLATSDY-QGLIILWSREKH 221 (223)
Q Consensus 193 ~--~v~~~~~~~~l~s~s~-d~~i~iwd~~~~ 221 (223)
. +++|+|++.+|++++. |+.+++|++.+.
T Consensus 262 ~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 4 6999999999999998 999999998553
No 79
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.75 E-value=1.3e-16 Score=128.91 Aligned_cols=148 Identities=21% Similarity=0.303 Sum_probs=119.4
Q ss_pred cccccCCcEEEEEECC-CCceeeee------------------eee-------------ecCCCCeeEEEEeecccccCC
Q psy3599 54 DQLRSTGVIVSILCDD-LGRLSKGK------------------RLV-------------LSQDCPITCLSWRSWISREAR 101 (223)
Q Consensus 54 ~~~~~~~~i~~~~~~~-~~~~~~~~------------------~~~-------------~~~~~~i~~l~~~~~~~~~~~ 101 (223)
.+.+|.+.|.++.|+| +++++.+. ... .| ...|.+++|+ +
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~-------~ 109 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVH-RYSVETVQWY-------P 109 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCC-SSCEEEEEEC-------T
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccC-CCcEEEEEEc-------c
Confidence 3346899999999999 88877554 111 24 8899999999 6
Q ss_pred -CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccc
Q psy3599 102 -DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHK 179 (223)
Q Consensus 102 -~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~ 179 (223)
++.+|++++.++ .+++||..++..+.. ..+... +.+ .++|. ..++.++++|+.|+.|++||+++ +
T Consensus 110 ~~~~~l~s~~~d~--~i~iwd~~~~~~~~~---~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~v~~~d~~~---~ 176 (408)
T 4a11_B 110 HDTGMFTSSSFDK--TLKVWDTNTLQTADV---FNFEET---VYSHHMSPV--STKHCLVAVGTRGPKVQLCDLKS---G 176 (408)
T ss_dssp TCTTCEEEEETTS--EEEEEETTTTEEEEE---EECSSC---EEEEEECSS--CSSCCEEEEEESSSSEEEEESSS---S
T ss_pred CCCcEEEEEeCCC--eEEEeeCCCCcccee---ccCCCc---eeeeEeecC--CCCCcEEEEEcCCCeEEEEeCCC---c
Confidence 788999999999 899999998876654 245555 333 66663 11456999999999999999999 8
Q ss_pred ccceeecccccCEEEEEEecCCC-EEEEEeCCCcEEEeeCCCCC
Q psy3599 180 NAVNKLQGHACPVLGVSFNYDES-LLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 180 ~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~ 222 (223)
+++..+.+|...|.+++|+|++. +|++++.||.|++||+++++
T Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 177 SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 88999999999999999999988 69999999999999997653
No 80
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.75 E-value=6.8e-17 Score=126.26 Aligned_cols=115 Identities=17% Similarity=0.250 Sum_probs=99.5
Q ss_pred CCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEE
Q psy3599 83 QDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVT 161 (223)
Q Consensus 83 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~s 161 (223)
+...|.+++|+ +++. +++++.++ .+++||..++..+... .+|... +.+ .|+| ++ .+++
T Consensus 183 ~~~~i~~~~~~-------~~~~-~~~~~~dg--~i~i~d~~~~~~~~~~--~~~~~~---i~~~~~~~-----~~-~l~~ 241 (313)
T 3odt_A 183 HNDVVRHLAVV-------DDGH-FISCSNDG--LIKLVDMHTGDVLRTY--EGHESF---VYCIKLLP-----NG-DIVS 241 (313)
T ss_dssp CSSCEEEEEEE-------ETTE-EEEEETTS--EEEEEETTTCCEEEEE--ECCSSC---EEEEEECT-----TS-CEEE
T ss_pred CcccEEEEEEc-------CCCe-EEEccCCC--eEEEEECCchhhhhhh--hcCCce---EEEEEEec-----CC-CEEE
Confidence 47899999999 8888 88888888 8999999988766543 478877 555 8999 56 5889
Q ss_pred ecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 162 GSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 162 gs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++.||.|++||+.+ ++++..+..|...|.+++|+|++. +++++.||.|++||+++++
T Consensus 242 ~~~dg~v~iwd~~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 242 CGEDRTVRIWSKEN---GSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EETTSEEEEECTTT---CCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred EecCCEEEEEECCC---CceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence 99999999999999 889999999999999999999998 6678899999999998754
No 81
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.4e-17 Score=139.58 Aligned_cols=142 Identities=13% Similarity=0.114 Sum_probs=109.5
Q ss_pred cccCCcEEEEEECCCCceeee-----e---eee-ecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCce
Q psy3599 56 LRSTGVIVSILCDDLGRLSKG-----K---RLV-LSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAV 126 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~-----~---~~~-~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~ 126 (223)
-+|.+.|..++++|+|..-.. . .+. .+ ...|.+++|+ |+|.+||+++.++ .+++||.++
T Consensus 49 ~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~-~~~V~~vawS-------PdG~~LAs~s~dg--~V~iwd~~~-- 116 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQP-VCYPRVCKPS-------PIDDWMAVLSNNG--NVSVFKDNK-- 116 (588)
T ss_dssp SSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSC-SCCEEEEEEC-------SSSSCEEEEETTS--CEEEEETTE--
T ss_pred cCCCccEEEEEECCCCCcceEEEEeCCCceEeecCC-CCcEEEEEEC-------CCCCEEEEEeCCC--cEEEEeCCc--
Confidence 368899999999997732110 0 222 33 6789999999 9999999999999 899999654
Q ss_pred EEeeeeeccccCc--ceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccccc-------ceee----cccccCE
Q psy3599 127 QLKRKFNVNHKSS--KYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNA-------VNKL----QGHACPV 192 (223)
Q Consensus 127 ~~~~~~~~~h~~~--~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~-------~~~~----~~h~~~v 192 (223)
.+. .+ .|... ...+.+ +|+| ++.+|++|+.||.|++||+.. +.. +..+ .+|...|
T Consensus 117 ~l~-~l--~~~~~~~~~sv~svafSP-----DG~~LAsgs~DGtVkIWd~~~---~~l~~~~~i~l~ti~~~~~gh~~~V 185 (588)
T 2j04_A 117 MLT-NL--DSKGNLSSRTYHCFEWNP-----IESSIVVGNEDGELQFFSIRK---NSENTPEFYFESSIRLSDAGSKDWV 185 (588)
T ss_dssp EEE-EC--CCSSCSTTTCEEEEEECS-----SSSCEEEEETTSEEEEEECCC---CTTTCCCCEEEEEEECSCTTCCCCE
T ss_pred eee-ec--cCCCccccccEEEEEEcC-----CCCEEEEEcCCCEEEEEECCC---CccccccceeeeeeecccccccccE
Confidence 333 22 24431 111666 8999 899999999999999999998 542 4565 6788899
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 193 LGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 193 ~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+++|+|+| +++++.|++|++||+..++
T Consensus 186 ~sVawSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 186 THIVWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred EEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 999999999 8888899999999987653
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.6e-16 Score=126.70 Aligned_cols=147 Identities=12% Similarity=0.110 Sum_probs=118.8
Q ss_pred ccccccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCe
Q psy3599 53 NDQLRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAV 114 (223)
Q Consensus 53 ~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~ 114 (223)
..+.+|.+.|.++.|+++++++.+. .+..| ...|.+++|+ +++.+|++++.++
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~-------~~~~~l~s~~~dg- 96 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGH-TGTIWSIDVD-------CFTKYCVTGSADY- 96 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCC-SSCEEEEEEC-------TTSSEEEEEETTT-
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhc-CCcEEEEEEc-------CCCCEEEEEeCCC-
Confidence 3445899999999999988776543 33445 7899999999 8999999999999
Q ss_pred EEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCC-----CcEEEEEcccCcc--------cc
Q psy3599 115 CILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSED-----SCVYFLDIQSKEH--------KN 180 (223)
Q Consensus 115 ~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~d-----g~v~iwd~~~~~~--------~~ 180 (223)
.+++||+.++..+... .+... +.+ .|+| ++.++++++.+ +.|++||+..... ..
T Consensus 97 -~i~iwd~~~~~~~~~~---~~~~~---v~~~~~~~-----~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 164 (369)
T 3zwl_B 97 -SIKLWDVSNGQCVATW---KSPVP---VKRVEFSP-----CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE 164 (369)
T ss_dssp -EEEEEETTTCCEEEEE---ECSSC---EEEEEECT-----TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred -eEEEEECCCCcEEEEe---ecCCC---eEEEEEcc-----CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence 8999999988766642 35555 555 8999 79999999999 9999999987210 02
Q ss_pred cceeeccccc--CEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 181 AVNKLQGHAC--PVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 181 ~~~~~~~h~~--~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
.+..+..|.. .+.+++|+|++..|++++.||.|++||+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 3445556666 899999999999999999999999999987
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.75 E-value=1.2e-16 Score=130.17 Aligned_cols=141 Identities=19% Similarity=0.255 Sum_probs=114.8
Q ss_pred cCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEE
Q psy3599 58 STGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKV 119 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 119 (223)
+.+.|.++.|+++++++... .+..| ...|.+++|+ +.+|++++.++ .+++
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~---------~~~l~~~~~dg--~i~i 200 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGH-QARVGCLSWN---------RHVLSSGSRSG--AIHH 200 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEEE---------TTEEEEEETTS--EEEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCC-CCceEEEEEC---------CCEEEEEcCCC--CEEE
Confidence 57789999999988766443 23345 7789999987 46899999999 8999
Q ss_pred ecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEe
Q psy3599 120 LDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFN 198 (223)
Q Consensus 120 ~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 198 (223)
||..........+ .+|... +.+ .|+| ++.++++|+.|+.|++||+++ ++++..+..|...|.+++|+
T Consensus 201 ~d~~~~~~~~~~~-~~~~~~---v~~~~~~~-----~~~~l~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~v~~~~~~ 268 (401)
T 4aez_A 201 HDVRIANHQIGTL-QGHSSE---VCGLAWRS-----DGLQLASGGNDNVVQIWDARS---SIPKFTKTNHNAAVKAVAWC 268 (401)
T ss_dssp EETTSSSCEEEEE-ECCSSC---EEEEEECT-----TSSEEEEEETTSCEEEEETTC---SSEEEEECCCSSCCCEEEEC
T ss_pred EecccCcceeeEE-cCCCCC---eeEEEEcC-----CCCEEEEEeCCCeEEEccCCC---CCccEEecCCcceEEEEEEC
Confidence 9998443333344 388887 555 8999 799999999999999999999 88888999999999999999
Q ss_pred cCC-CEEEEEe--CCCcEEEeeCCCCC
Q psy3599 199 YDE-SLLATSD--YQGLIILWSREKHE 222 (223)
Q Consensus 199 ~~~-~~l~s~s--~d~~i~iwd~~~~~ 222 (223)
|++ .++++++ .|+.|++||+++++
T Consensus 269 p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 269 PWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp TTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 975 5667765 79999999998765
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.75 E-value=5e-17 Score=129.30 Aligned_cols=122 Identities=15% Similarity=0.165 Sum_probs=97.9
Q ss_pred CCCeeEEEEeecccccCC---CCeEEEEEeCCCeEEEEEecCCCceEEeeee---eccccCcceeEEE-eeecCcccCCC
Q psy3599 84 DCPITCLSWRSWISREAR---DPTLLVNIAANAVCILKVLDKEGAVQLKRKF---NVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~---~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~---~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
...|.+++|+ | ++.+|++++.++ .+++||..++..+.... ..+|... +.+ .|+| ++
T Consensus 209 ~~~v~~~~~~-------~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~-----~~ 271 (357)
T 3i2n_A 209 KNGVCSLEFD-------RKDISMNKLVATSLEG--KFHVFDMRTQHPTKGFASVSEKAHKST---VWQVRHLP-----QN 271 (357)
T ss_dssp SSCEEEEEES-------CSSSSCCEEEEEESTT--EEEEEEEEEEETTTEEEEEEEECCSSC---EEEEEEET-----TE
T ss_pred CCceEEEEcC-------CCCCCCCEEEEECCCC--eEEEEeCcCCCcccceeeeccCCCcCC---EEEEEECC-----CC
Confidence 7899999999 7 899999999999 89999987654332210 0267777 555 8999 67
Q ss_pred c-EEEEecCCCcEEEEEcccCcc----------------cccceeecccccCEEEEEEecCCCEEE-EEeCCCcEEEeeC
Q psy3599 157 A-CVVTGSEDSCVYFLDIQSKEH----------------KNAVNKLQGHACPVLGVSFNYDESLLA-TSDYQGLIILWSR 218 (223)
Q Consensus 157 ~-~l~sgs~dg~v~iwd~~~~~~----------------~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~ 218 (223)
. ++++|+.||.|++||++.... .+++..+.+|...|.+++|+|++..|+ +++.|+.|++||+
T Consensus 272 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 272 RELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 6 899999999999999985110 135677889999999999999999888 8999999999999
Q ss_pred CCCC
Q psy3599 219 EKHE 222 (223)
Q Consensus 219 ~~~~ 222 (223)
.+.+
T Consensus 352 ~~~~ 355 (357)
T 3i2n_A 352 TKLN 355 (357)
T ss_dssp CC--
T ss_pred CCcc
Confidence 8754
No 85
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.74 E-value=3.1e-17 Score=146.48 Aligned_cols=142 Identities=14% Similarity=0.079 Sum_probs=115.6
Q ss_pred cccCCcEEEEEECCCCceeeee----------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEE
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK----------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKV 119 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~----------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 119 (223)
.+|.+.|.+++|+|+++++++. .....+..+|.+++|+ + +.+|++++.|+ .+++
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fs-------p-g~~L~S~s~D~--~v~l 83 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFV-------K-GIYLVVINAKD--TVYV 83 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEE-------T-TTEEEEEETTC--EEEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEc-------C-CCEEEEEECcC--eEEE
Confidence 4788899999999988877654 1122236789999999 7 77999999999 9999
Q ss_pred ecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccc-----------eeecc
Q psy3599 120 LDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAV-----------NKLQG 187 (223)
Q Consensus 120 ~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~-----------~~~~~ 187 (223)
||+.++..+... .|... +.+ .|+| ++.++++|+.||.|++||+++ +++. ..+.+
T Consensus 84 Wd~~~~~~~~~~---~~~~~---V~~v~~sp-----~g~~l~sgs~dg~V~lwd~~~---~~~~~~~i~~~~~~~~~~~~ 149 (902)
T 2oaj_A 84 LSLYSQKVLTTV---FVPGK---ITSIDTDA-----SLDWMLIGLQNGSMIVYDIDR---DQLSSFKLDNLQKSSFFPAA 149 (902)
T ss_dssp EETTTCSEEEEE---ECSSC---EEEEECCT-----TCSEEEEEETTSCEEEEETTT---TEEEEEEECCHHHHHTCSSS
T ss_pred EECCCCcEEEEE---cCCCC---EEEEEECC-----CCCEEEEEcCCCcEEEEECCC---Cccccceecccccccccccc
Confidence 999988766543 35555 666 8999 799999999999999999988 5542 34577
Q ss_pred cccCEEEEEEecC-CCEEEEEeCCCcEEEeeCCCCC
Q psy3599 188 HACPVLGVSFNYD-ESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 188 h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|...|.+++|+|+ +..+++|+.|+.| +||+++++
T Consensus 150 h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~ 184 (902)
T 2oaj_A 150 RLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE 184 (902)
T ss_dssp CCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE
T ss_pred CCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc
Confidence 9999999999996 5789999999999 99998754
No 86
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.74 E-value=1.2e-16 Score=130.04 Aligned_cols=143 Identities=13% Similarity=0.192 Sum_probs=112.7
Q ss_pred cccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCC-eEEEEEe--CCCe
Q psy3599 56 LRSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDP-TLLVNIA--ANAV 114 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~-~~l~~~~--~~~~ 114 (223)
.+|.+.|.++.|+++++.+.+. .+..| ...|.+++|+ +++ .++++++ .++
T Consensus 214 ~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~-------p~~~~ll~~~~gs~d~- 284 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNH-NAAVKAVAWC-------PWQSNLLATGGGTMDK- 284 (401)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCC-SSCCCEEEEC-------TTSTTEEEEECCTTTC-
T ss_pred cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCC-cceEEEEEEC-------CCCCCEEEEecCCCCC-
Confidence 3688889999999987766443 22334 7899999999 654 6677765 688
Q ss_pred EEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEE--ecCCCcEEEEEcccCcccccc--eeecccc
Q psy3599 115 CILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVT--GSEDSCVYFLDIQSKEHKNAV--NKLQGHA 189 (223)
Q Consensus 115 ~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~s--gs~dg~v~iwd~~~~~~~~~~--~~~~~h~ 189 (223)
.+++||..++..+... .+... +.+ .|+| ++..+++ |+.||.|++||+.+ ++.. ..+.+|.
T Consensus 285 -~i~i~d~~~~~~~~~~---~~~~~---v~~~~~s~-----~~~~l~~~~g~~dg~i~v~~~~~---~~~~~~~~~~~h~ 349 (401)
T 4aez_A 285 -QIHFWNAATGARVNTV---DAGSQ---VTSLIWSP-----HSKEIMSTHGFPDNNLSIWSYSS---SGLTKQVDIPAHD 349 (401)
T ss_dssp -EEEEEETTTCCEEEEE---ECSSC---EEEEEECS-----SSSEEEEEECTTTCEEEEEEEET---TEEEEEEEEECCS
T ss_pred -EEEEEECCCCCEEEEE---eCCCc---EEEEEECC-----CCCeEEEEeecCCCcEEEEecCC---ccceeEEEecCCC
Confidence 8999999988766542 44445 555 8999 7888888 66999999999998 5443 4467899
Q ss_pred cCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 190 CPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 190 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
..|.+++|+|++.+|++++.||.|++||+.+++
T Consensus 350 ~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 350 TRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 999999999999999999999999999998765
No 87
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.74 E-value=5.2e-17 Score=142.56 Aligned_cols=144 Identities=18% Similarity=0.293 Sum_probs=112.9
Q ss_pred ccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCC--CeEEEEEeCCCe
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARD--PTLLVNIAANAV 114 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~--~~~l~~~~~~~~ 114 (223)
+|.+.|.++.|+++|+.+.+. .+..| ..+|++++|+ ++ +.+|++++.|+
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s-------~~~~~~~l~s~s~Dg- 77 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWA-------HPKFGTILASCSYDG- 77 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCC-SSCEEEEEEC-------CTTSCSEEEEEETTS-
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCC-cCceEEEEec-------CCCCCCEEEEEeCCC-
Confidence 566667777776655544322 33455 8899999999 66 89999999999
Q ss_pred EEEEEecCCCce--EEeeeeeccccCcceeEEE-eeecCcccCC--CcEEEEecCCCcEEEEEcccCcccccceeecccc
Q psy3599 115 CILKVLDKEGAV--QLKRKFNVNHKSSKYQVRS-TFCPIMSFRE--GACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHA 189 (223)
Q Consensus 115 ~~v~i~d~~~~~--~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~--~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~ 189 (223)
.+++||..++. .+. .+ .+|... +.+ .|+| + +..+++|+.||.|++||++... ......+.+|.
T Consensus 78 -~I~vwd~~~~~~~~~~-~~-~~h~~~---V~~v~~sp-----~~~~~~l~sgs~dg~I~vwdl~~~~-~~~~~~~~~~~ 145 (753)
T 3jro_A 78 -KVLIWKEENGRWSQIA-VH-AVHSAS---VNSVQWAP-----HEYGPLLLVASSDGKVSVVEFKENG-TTSPIIIDAHA 145 (753)
T ss_dssp -CEEEEEEETTEEEEEE-EE-CCCSSC---EEEEEECC-----GGGCSEEEEEETTSEEEEEECCSSS-CCCCEEEECCS
T ss_pred -eEEEEECCCCcccccc-cc-cCCCCC---eEEEEECC-----CCCCCEEEEEeCCCcEEEEEeecCC-CcceeEeecCC
Confidence 89999998875 333 22 478777 666 8999 6 8999999999999999998811 23455667899
Q ss_pred cCEEEEEEec-------------CCCEEEEEeCCCcEEEeeCCCC
Q psy3599 190 CPVLGVSFNY-------------DESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 190 ~~v~~v~~~~-------------~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
..|.++.|+| ++..+++|+.||.|++||++++
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETT
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCC
Confidence 9999999999 5899999999999999999865
No 88
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.74 E-value=6.4e-17 Score=132.77 Aligned_cols=146 Identities=13% Similarity=0.150 Sum_probs=113.1
Q ss_pred ccCCcEEEEEECCCCceeeee-------eeeec-------------------------CCCCeeEEEEeecccccCCCCe
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK-------RLVLS-------------------------QDCPITCLSWRSWISREARDPT 104 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~-------~~~~~-------------------------~~~~i~~l~~~~~~~~~~~~~~ 104 (223)
+|.+.|.++.|+++++.+.+. .+... ....+.++.+.. .+++.
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 183 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV-----NEEKS 183 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE-----CSSCE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE-----cCCCC
Confidence 578889999998877665433 11110 244555555221 17899
Q ss_pred EEEEEeCCCeEEEEEecCCCceEEeeeeecc--ccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccccc
Q psy3599 105 LLVNIAANAVCILKVLDKEGAVQLKRKFNVN--HKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNA 181 (223)
Q Consensus 105 ~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~--h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~ 181 (223)
+|++++.++ .+++||+.++..+... .+ |... +.+ +|+| ++.+|++|+.||.|++||+++ +++
T Consensus 184 ~l~~~~~d~--~i~iwd~~~~~~~~~~--~~~~h~~~---v~~~~~s~-----~~~~l~s~~~dg~i~iwd~~~---~~~ 248 (437)
T 3gre_A 184 LLVALTNLS--RVIIFDIRTLERLQII--ENSPRHGA---VSSICIDE-----ECCVLILGTTRGIIDIWDIRF---NVL 248 (437)
T ss_dssp EEEEEETTS--EEEEEETTTCCEEEEE--ECCGGGCC---EEEEEECT-----TSCEEEEEETTSCEEEEETTT---TEE
T ss_pred EEEEEeCCC--eEEEEeCCCCeeeEEE--ccCCCCCc---eEEEEECC-----CCCEEEEEcCCCeEEEEEcCC---ccE
Confidence 999999999 9999999988776644 24 6666 666 8999 799999999999999999999 888
Q ss_pred ceeec-ccccCEEEEEEec----CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 182 VNKLQ-GHACPVLGVSFNY----DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 182 ~~~~~-~h~~~v~~v~~~~----~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+..+. .|...|.+++|+| ++.+|++|+.||.|++||+++++
T Consensus 249 ~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 249 IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 88876 6888999997765 57799999999999999998754
No 89
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.74 E-value=9.1e-17 Score=128.08 Aligned_cols=128 Identities=20% Similarity=0.240 Sum_probs=111.4
Q ss_pred CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eee
Q psy3599 70 LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFC 148 (223)
Q Consensus 70 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s 148 (223)
.|.......+..| ..+|++++|+ +++.+|++++.++ .+++||..++..+.. + .+|... +.+ .|+
T Consensus 19 ~G~~~~~~~l~~h-~~~v~~~~~s-------~~~~~l~~~~~dg--~i~vwd~~~~~~~~~-~-~~h~~~---v~~~~~~ 83 (369)
T 3zwl_B 19 QGSHMKAIKLTGH-ERPLTQVKYN-------KEGDLLFSCSKDS--SASVWYSLNGERLGT-L-DGHTGT---IWSIDVD 83 (369)
T ss_dssp SCCSEEEEEEECC-SSCEEEEEEC-------TTSCEEEEEESSS--CEEEEETTTCCEEEE-E-CCCSSC---EEEEEEC
T ss_pred eccccccEEEEEe-eceEEEEEEc-------CCCCEEEEEeCCC--EEEEEeCCCchhhhh-h-hhcCCc---EEEEEEc
Confidence 4555555567778 9999999999 9999999999888 899999998876654 3 478887 555 899
Q ss_pred cCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCC-----CcEEEeeCCCC
Q psy3599 149 PIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQ-----GLIILWSREKH 221 (223)
Q Consensus 149 ~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 221 (223)
| ++.+|++++.||.|++||+.+ ++++..+. |...|.+++|+|++.++++++.+ +.|++||++.+
T Consensus 84 ~-----~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 84 C-----FTKYCVTGSADYSIKLWDVSN---GQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp T-----TSSEEEEEETTTEEEEEETTT---CCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred C-----CCCEEEEEeCCCeEEEEECCC---CcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 9 799999999999999999999 88888887 88899999999999999999988 99999998765
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.74 E-value=5.7e-17 Score=129.24 Aligned_cols=122 Identities=20% Similarity=0.284 Sum_probs=100.4
Q ss_pred eeeecCCCCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCceEEeeeee-ccccCcceeEEE-eeecCcccC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAVQLKRKFN-VNHKSSKYQVRS-TFCPIMSFR 154 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~-~~h~~~~~~i~~-~~s~~~~~~ 154 (223)
.+..| ..+|.+++|+ + ++.+|++++.++ .+++||..++..+..... .+|... +.+ .|+|
T Consensus 110 ~~~~~-~~~i~~~~~~-------~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~---v~~~~~~~----- 171 (366)
T 3k26_A 110 HYVGH-GNAINELKFH-------PRDPNLLLSVSKDH--ALRLWNIQTDTLVAIFGGVEGHRDE---VLSADYDL----- 171 (366)
T ss_dssp EEESC-CSCEEEEEEC-------SSCTTEEEEEETTS--CEEEEETTTTEEEEEECSTTSCSSC---EEEEEECT-----
T ss_pred eecCC-CCcEEEEEEC-------CCCCCEEEEEeCCC--eEEEEEeecCeEEEEecccccccCc---eeEEEECC-----
Confidence 34445 8899999999 7 899999999999 899999998876654210 267776 555 8999
Q ss_pred CCcEEEEecCCCcEEEEEcccCcccccceeecc----------------------------cccCEEEEEEecCCCEEEE
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQG----------------------------HACPVLGVSFNYDESLLAT 206 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~----------------------------h~~~v~~v~~~~~~~~l~s 206 (223)
++.++++|+.||.|++||+++ ++.+..+.. |...|.+++|+ +.++++
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 246 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINS---KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS 246 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCS---HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred CCCEEEEecCCCCEEEEECCC---CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence 799999999999999999998 655544443 89999999998 779999
Q ss_pred EeCCCcEEEeeCCCCC
Q psy3599 207 SDYQGLIILWSREKHE 222 (223)
Q Consensus 207 ~s~d~~i~iwd~~~~~ 222 (223)
++.|+.|++||+++++
T Consensus 247 ~~~d~~i~~wd~~~~~ 262 (366)
T 3k26_A 247 KSCENAIVCWKPGKME 262 (366)
T ss_dssp ECSSSEEEEEEESSTT
T ss_pred EecCCEEEEEeCCCcc
Confidence 9999999999988753
No 91
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.74 E-value=1.5e-16 Score=131.53 Aligned_cols=145 Identities=19% Similarity=0.298 Sum_probs=114.9
Q ss_pred ccCCcEEEEEECCCCceeeee-----------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK-----------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKV 119 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 119 (223)
+|.+.|.++.|++++.++... .+..| ..+|.+++|++. +++.+|++++.++ .+++
T Consensus 160 ~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h-~~~v~~l~~~~~-----~~~~~l~s~s~d~--~i~v 231 (464)
T 3v7d_B 160 GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGH-NSTVRCLDIVEY-----KNIKYIVTGSRDN--TLHV 231 (464)
T ss_dssp CCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEEES-----SSCEEEEEEETTS--CEEE
T ss_pred CCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCC-CCccEEEEEecC-----CCCCEEEEEcCCC--cEEE
Confidence 578888888888866433221 33445 889999999832 5779999999999 8999
Q ss_pred ecCCCceEEe----------------------eeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCc
Q psy3599 120 LDKEGAVQLK----------------------RKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKE 177 (223)
Q Consensus 120 ~d~~~~~~~~----------------------~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~ 177 (223)
||..++.... ..+ .+|... +.+ +++ ++.++++|+.||.|++||+.+
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---v~~-~~~-----~~~~l~~~~~d~~i~vwd~~~-- 299 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL-RGHMAS---VRT-VSG-----HGNIVVSGSYDNTLIVWDVAQ-- 299 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEE-CCCSSC---EEE-EEE-----ETTEEEEEETTSCEEEEETTT--
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEc-cCccce---EEE-EcC-----CCCEEEEEeCCCeEEEEECCC--
Confidence 9988664321 122 356555 332 355 689999999999999999999
Q ss_pred ccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 178 HKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 178 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++++..+.+|...|.+++|+|++..+++|+.||.|++||+++++
T Consensus 300 -~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 300 -MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp -TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred -CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 89999999999999999999999999999999999999998764
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.2e-16 Score=129.74 Aligned_cols=144 Identities=16% Similarity=0.299 Sum_probs=114.3
Q ss_pred cCCcEEEEEECCCCceeeee-----------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEe
Q psy3599 58 STGVIVSILCDDLGRLSKGK-----------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVL 120 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~ 120 (223)
|.+.|.++.|+|+++++... .+..| ..+|.+++|+ +++.+|++++.++ .+++|
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~~v~~~~~~-------~~~~~l~~~~~d~--~i~iw 176 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFH-RAPIVSVKWN-------KDGTHIISMDVEN--VTILW 176 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCC-CSCEEEEEEC-------TTSSEEEEEETTC--CEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCC-CccEEEEEEC-------CCCCEEEEEecCC--eEEEE
Confidence 56788889998887766443 23335 7899999999 9999999999888 89999
Q ss_pred cCCCceEEeeeeeccccCcce-------------eEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecc
Q psy3599 121 DKEGAVQLKRKFNVNHKSSKY-------------QVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQG 187 (223)
Q Consensus 121 d~~~~~~~~~~~~~~h~~~~~-------------~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~ 187 (223)
|..++..+... . .+..... .....|+| +..+++++.||.|++||+.+ ++.+..+.+
T Consensus 177 d~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~i~~~d~~~---~~~~~~~~~ 245 (425)
T 1r5m_A 177 NVISGTVMQHF-E-LKETGGSSINAENHSGDGSLGVDVEWVD------DDKFVIPGPKGAIFVYQITE---KTPTGKLIG 245 (425)
T ss_dssp ETTTTEEEEEE-C-CC---------------CCCBSCCEEEE------TTEEEEECGGGCEEEEETTC---SSCSEEECC
T ss_pred ECCCCcEEEEe-e-ccccCccceeeccccCCcceeeEEEEcC------CCEEEEEcCCCeEEEEEcCC---Cceeeeecc
Confidence 99988766543 2 3333200 02336777 46688999999999999999 888889999
Q ss_pred cccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 188 HACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 188 h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|...|.+++|+|++.+|++++.|+.|++||+++++
T Consensus 246 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 246 HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN 280 (425)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 99999999999999999999999999999998764
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.74 E-value=1.8e-16 Score=130.11 Aligned_cols=114 Identities=13% Similarity=0.187 Sum_probs=95.2
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeee-------eeccccCcceeEEE-eeecCcccCC
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRK-------FNVNHKSSKYQVRS-TFCPIMSFRE 155 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~-------~~~~h~~~~~~i~~-~~s~~~~~~~ 155 (223)
...|.+++|+ +++.+|+++ .|+ .+++||+......... + .+|... +.+ +|+| +
T Consensus 177 ~~~v~~~~~~-------~~~~~l~s~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~---v~~~~~~p-----~ 237 (447)
T 3dw8_B 177 TYHINSISIN-------SDYETYLSA-DDL--RINLWHLEITDRSFNIVDIKPANM-EELTEV---ITAAEFHP-----N 237 (447)
T ss_dssp SSCCCEEEEC-------TTSSEEEEE-CSS--EEEEEETTEEEEEEEEEECCCSSG-GGCCCC---EEEEEECS-----S
T ss_pred CcceEEEEEc-------CCCCEEEEe-CCC--eEEEEECCCCCceeeeeecccccc-cccCcc---eEEEEECC-----C
Confidence 7899999999 899999998 688 8999999844333221 2 377777 555 8999 6
Q ss_pred C-cEEEEecCCCcEEEEEcccCccccc----ceeeccccc------------CEEEEEEecCCCEEEEEeCCCcEEEeeC
Q psy3599 156 G-ACVVTGSEDSCVYFLDIQSKEHKNA----VNKLQGHAC------------PVLGVSFNYDESLLATSDYQGLIILWSR 218 (223)
Q Consensus 156 ~-~~l~sgs~dg~v~iwd~~~~~~~~~----~~~~~~h~~------------~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 218 (223)
+ .+|++|+.||.|++||+++ ++. +..+.+|.. .|.+++|+|++.+|++++. +.|++||+
T Consensus 238 ~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~ 313 (447)
T 3dw8_B 238 SCNTFVYSSSKGTIRLCDMRA---SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDL 313 (447)
T ss_dssp CTTEEEEEETTSCEEEEETTT---CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEET
T ss_pred CCcEEEEEeCCCeEEEEECcC---CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeC
Confidence 6 9999999999999999998 665 678888876 8999999999999999998 99999999
Q ss_pred CC
Q psy3599 219 EK 220 (223)
Q Consensus 219 ~~ 220 (223)
++
T Consensus 314 ~~ 315 (447)
T 3dw8_B 314 NM 315 (447)
T ss_dssp TC
T ss_pred CC
Confidence 86
No 94
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.74 E-value=1.5e-16 Score=128.58 Aligned_cols=116 Identities=19% Similarity=0.356 Sum_probs=102.1
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeecc---c---cCcceeEEE-eeecCcccCCC
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVN---H---KSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~---h---~~~~~~i~~-~~s~~~~~~~~ 156 (223)
...|.+++|+ +++ +|++++.++ .+++||+.++..+.. + .. | ... +.+ .|+| ++
T Consensus 186 ~~~i~~~~~~-------~~~-~l~~~~~dg--~i~i~d~~~~~~~~~-~-~~~~~h~~~~~~---i~~i~~~~-----~~ 245 (397)
T 1sq9_A 186 SQFATSVDIS-------ERG-LIATGFNNG--TVQISELSTLRPLYN-F-ESQHSMINNSNS---IRSVKFSP-----QG 245 (397)
T ss_dssp CCCCCEEEEC-------TTS-EEEEECTTS--EEEEEETTTTEEEEE-E-ECCC---CCCCC---EEEEEECS-----ST
T ss_pred CCCceEEEEC-------CCc-eEEEEeCCC--cEEEEECCCCceeEE-E-eccccccccCCc---cceEEECC-----CC
Confidence 6789999999 888 999999999 899999998866654 3 35 6 666 666 8999 79
Q ss_pred cEEEEecCC---CcEEEEEcccCcccccceeecc-------------cccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 157 ACVVTGSED---SCVYFLDIQSKEHKNAVNKLQG-------------HACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 157 ~~l~sgs~d---g~v~iwd~~~~~~~~~~~~~~~-------------h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
.+|++++.| |.|++||+++ ++++..+.+ |...|.+++|+|++.+|++++.||.|++||+++
T Consensus 246 ~~l~~~~~d~~~g~i~i~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLYETEF---GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp TEEEEEEEETTEEEEEEEETTT---CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEecCCCCceEEEEECCC---CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999 9999999999 888899988 999999999999999999999999999999987
Q ss_pred CC
Q psy3599 221 HE 222 (223)
Q Consensus 221 ~~ 222 (223)
++
T Consensus 323 ~~ 324 (397)
T 1sq9_A 323 KE 324 (397)
T ss_dssp TE
T ss_pred Cc
Confidence 64
No 95
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.73 E-value=3.4e-16 Score=133.17 Aligned_cols=142 Identities=17% Similarity=0.156 Sum_probs=120.4
Q ss_pred ccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCe-EEEEEeCCCeE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPT-LLVNIAANAVC 115 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~-~l~~~~~~~~~ 115 (223)
.+.+.|..+.|+|+++.+... .+..| ...|.+++|+ +++. +|++++.++
T Consensus 114 ~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~v~~~~~~-------~~~~~~l~~~~~d~-- 183 (615)
T 1pgu_A 114 VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGH-SQRINACHLK-------QSRPMRSMTVGDDG-- 183 (615)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSC-SSCEEEEEEC-------SSSSCEEEEEETTT--
T ss_pred cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecC-CccEEEEEEC-------CCCCcEEEEEeCCC--
Confidence 577889999999988766432 22344 7789999999 8886 899999999
Q ss_pred EEEEecCCCceEEeeeeeccccC---cceeEEE-eeecCcccCC-CcEEEEecCCCcEEEEEcccCcccccceee-c---
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKS---SKYQVRS-TFCPIMSFRE-GACVVTGSEDSCVYFLDIQSKEHKNAVNKL-Q--- 186 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~---~~~~i~~-~~s~~~~~~~-~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~--- 186 (223)
.+++||..++..+.. + .+|.. . +.+ .|+| + +.++++|+.||.|++||+++ ++.+..+ .
T Consensus 184 ~v~vwd~~~~~~~~~-~-~~~~~~~~~---v~~~~~~~-----~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~~~~ 250 (615)
T 1pgu_A 184 SVVFYQGPPFKFSAS-D-RTHHKQGSF---VRDVEFSP-----DSGEFVITVGSDRKISCFDGKS---GEFLKYIEDDQE 250 (615)
T ss_dssp EEEEEETTTBEEEEE-E-CSSSCTTCC---EEEEEECS-----TTCCEEEEEETTCCEEEEETTT---CCEEEECCBTTB
T ss_pred cEEEEeCCCcceeee-e-cccCCCCce---EEEEEECC-----CCCCEEEEEeCCCeEEEEECCC---CCEeEEeccccc
Confidence 899999998876654 3 37777 5 666 8999 7 99999999999999999999 8888888 6
Q ss_pred ccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 187 GHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 187 ~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|...|.++.|+ ++.+|++++.|+.|++||+++++
T Consensus 251 ~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 251 PVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp CCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE
T ss_pred ccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCc
Confidence 899999999999 99999999999999999998754
No 96
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.73 E-value=9.4e-17 Score=141.22 Aligned_cols=121 Identities=11% Similarity=0.236 Sum_probs=109.2
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
.+..| ...|.+++|+ |++.+|++++.++ .+++||..++..+.. + .+|... +.+ .|+| ++
T Consensus 8 ~~~~h-~~~v~~i~~s-------p~~~~la~~~~~g--~v~iwd~~~~~~~~~-~-~~~~~~---v~~~~~s~-----~~ 67 (814)
T 3mkq_A 8 TFSNR-SDRVKGIDFH-------PTEPWVLTTLYSG--RVEIWNYETQVEVRS-I-QVTETP---VRAGKFIA-----RK 67 (814)
T ss_dssp EEEEE-CSCEEEEEEC-------SSSSEEEEEETTS--EEEEEETTTTEEEEE-E-ECCSSC---EEEEEEEG-----GG
T ss_pred eeecC-CCceEEEEEC-------CCCCEEEEEeCCC--EEEEEECCCCceEEE-E-ecCCCc---EEEEEEeC-----CC
Confidence 56677 8999999999 9999999999999 899999998876664 3 378877 666 8999 79
Q ss_pred cEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.+|++|+.||.|++||+.+ ++.+..+.+|...|.+++|+|++..|++++.||.|++||++++
T Consensus 68 ~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNT---GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp TEEEEEETTSEEEEEETTT---CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred CEEEEEeCCCeEEEEECCC---CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC
Confidence 9999999999999999999 8889999999999999999999999999999999999998765
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.1e-16 Score=134.25 Aligned_cols=139 Identities=8% Similarity=0.095 Sum_probs=109.1
Q ss_pred ccCCcEEEEEECCCCceeeee-------e---------eeecCCC-----CeeEEEEeecccccCCCCeEEEEEeCCCeE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK-------R---------LVLSQDC-----PITCLSWRSWISREARDPTLLVNIAANAVC 115 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~-------~---------~~~~~~~-----~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (223)
.+...|.+++|+|+|+.+++. . +. | .. .+.+++|+ |||++|+++++|+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~-~~~~~~~sv~svafS-------PDG~~LAsgs~DG-- 151 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-S-KGNLSSRTYHCFEWN-------PIESSIVVGNEDG-- 151 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-C-SSCSTTTCEEEEEEC-------SSSSCEEEEETTS--
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-C-CCccccccEEEEEEc-------CCCCEEEEEcCCC--
Confidence 457889999999999877654 1 22 3 33 59999999 9999999999999
Q ss_pred EEEEecCCCceE------Eeeeee---ccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccccc---c
Q psy3599 116 ILKVLDKEGAVQ------LKRKFN---VNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNA---V 182 (223)
Q Consensus 116 ~v~i~d~~~~~~------~~~~~~---~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~---~ 182 (223)
.+++||..++.. ....+. .+|... +.+ +|+| ++ +++++.|+.|++||+.. ... .
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~---V~sVawSP-----dg--Laass~D~tVrlWd~~~---~~~~~~~ 218 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDW---VTHIVWYE-----DV--LVAALSNNSVFSMTVSA---SSHQPVS 218 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCC---EEEEEEET-----TE--EEEEETTCCEEEECCCS---SSSCCCE
T ss_pred EEEEEECCCCccccccceeeeeeeccccccccc---EEEEEEcC-----Cc--EEEEeCCCeEEEEECCC---Cccccce
Confidence 999999987742 122331 367777 555 8999 67 88889999999999988 553 3
Q ss_pred eee-cccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 183 NKL-QGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 183 ~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.++ .+|...|.+++|+ ++.+|+++ +++|++||+..++
T Consensus 219 ~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~ 256 (588)
T 2j04_A 219 RMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYS 256 (588)
T ss_dssp EEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTE
T ss_pred eeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCe
Confidence 456 4788899999999 68999997 7999999987653
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=2e-16 Score=138.87 Aligned_cols=153 Identities=18% Similarity=0.248 Sum_probs=114.7
Q ss_pred cccCCcEEEEEECCC--Cceeeee--------------------eeeecCCCCeeEEEEeecccccCCC--CeEEEEEeC
Q psy3599 56 LRSTGVIVSILCDDL--GRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARD--PTLLVNIAA 111 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~--~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~--~~~l~~~~~ 111 (223)
.+|.+.|.++.|+++ ++.+.+. .+..| ..+|++++|+ |+ +.+|++++.
T Consensus 50 ~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h-~~~V~~v~~s-------p~~~~~~l~sgs~ 121 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH-SASVNSVQWA-------PHEYGPLLLVASS 121 (753)
T ss_dssp CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEEC-------CGGGCSEEEEEET
T ss_pred cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCC-CCCeEEEEEC-------CCCCCCEEEEEeC
Confidence 356777777777664 5544332 22334 7899999999 77 899999999
Q ss_pred CCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcc--------cCCCcEEEEecCCCcEEEEEcccCcc-ccc
Q psy3599 112 NAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMS--------FREGACVVTGSEDSCVYFLDIQSKEH-KNA 181 (223)
Q Consensus 112 ~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~--------~~~~~~l~sgs~dg~v~iwd~~~~~~-~~~ 181 (223)
++ .+++||..++.........+|... +.+ .|+|... ..++..+++|+.||.|++||+++... ..+
T Consensus 122 dg--~I~vwdl~~~~~~~~~~~~~~~~~---v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~ 196 (753)
T 3jro_A 122 DG--KVSVVEFKENGTTSPIIIDAHAIG---VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 196 (753)
T ss_dssp TS--EEEEEECCSSSCCCCEEEECCSSC---EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEE
T ss_pred CC--cEEEEEeecCCCcceeEeecCCCc---eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccccee
Confidence 99 999999887632222211477776 555 7888210 00278999999999999999987110 155
Q ss_pred ceeecccccCEEEEEEecC---CCEEEEEeCCCcEEEeeCCCC
Q psy3599 182 VNKLQGHACPVLGVSFNYD---ESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 182 ~~~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~~~ 221 (223)
+..+.+|...|.+++|+|+ +.+|++++.||.|++||++++
T Consensus 197 ~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 197 ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 6778899999999999999 899999999999999999875
No 99
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.8e-16 Score=128.88 Aligned_cols=145 Identities=15% Similarity=0.304 Sum_probs=115.7
Q ss_pred cccCCcEEEEEECCC-Cceeeee--------------e-------------eeecCCCCeeEEEEeecccccCCC-CeEE
Q psy3599 56 LRSTGVIVSILCDDL-GRLSKGK--------------R-------------LVLSQDCPITCLSWRSWISREARD-PTLL 106 (223)
Q Consensus 56 ~~~~~~i~~~~~~~~-~~~~~~~--------------~-------------~~~~~~~~i~~l~~~~~~~~~~~~-~~~l 106 (223)
.+|.+.|.++.|+|+ ++++.+. . ...| ...|.+++|+ ++ +.+|
T Consensus 110 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~-------~~~~~~l 181 (416)
T 2pm9_A 110 SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS-VDEVISLAWN-------QSLAHVF 181 (416)
T ss_dssp CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS-SCCCCEEEEC-------SSCTTEE
T ss_pred cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC-CCCeeEEEeC-------CCCCcEE
Confidence 367788888888886 5555332 1 0123 6789999999 77 7899
Q ss_pred EEEeCCCeEEEEEecCCCceEEeeeeeccc------cCcceeEEE-eeecCcccCCCcEEEEecCCC---cEEEEEcccC
Q psy3599 107 VNIAANAVCILKVLDKEGAVQLKRKFNVNH------KSSKYQVRS-TFCPIMSFREGACVVTGSEDS---CVYFLDIQSK 176 (223)
Q Consensus 107 ~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h------~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg---~v~iwd~~~~ 176 (223)
++++.++ .+++||+.++..+... ..+ ... +.+ .|+|. +..++++++.|+ .|++||+++
T Consensus 182 ~~~~~dg--~v~iwd~~~~~~~~~~--~~~~~~~~~~~~---v~~~~~~~~----~~~~l~~~~~d~~~~~i~~~d~~~- 249 (416)
T 2pm9_A 182 ASAGSSN--FASIWDLKAKKEVIHL--SYTSPNSGIKQQ---LSVVEWHPK----NSTRVATATGSDNDPSILIWDLRN- 249 (416)
T ss_dssp EEESSSS--CEEEEETTTTEEEEEE--CCCCCSSCCCCC---EEEEEECSS----CTTEEEEEECCSSSCCCCEEETTS-
T ss_pred EEEcCCC--CEEEEECCCCCcceEE--eccccccccCCc---eEEEEECCC----CCCEEEEEECCCCCceEEEEeCCC-
Confidence 9999888 8999999988766543 233 344 666 89993 247999999999 999999998
Q ss_pred ccc-ccceeec-ccccCEEEEEEec-CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 177 EHK-NAVNKLQ-GHACPVLGVSFNY-DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 177 ~~~-~~~~~~~-~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+ .++..+. +|...|.+++|+| ++.+|++++.|+.|++||+++++
T Consensus 250 --~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 250 --ANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp --TTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC
T ss_pred --CCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc
Confidence 5 5677888 8999999999999 89999999999999999998765
No 100
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.72 E-value=6.9e-17 Score=131.29 Aligned_cols=148 Identities=11% Similarity=0.223 Sum_probs=113.9
Q ss_pred ccCCcEEEEEECCC-Cceeeee------------------eeeecC-----CCCeeEEEEeecccccCCCC-eEEEEEeC
Q psy3599 57 RSTGVIVSILCDDL-GRLSKGK------------------RLVLSQ-----DCPITCLSWRSWISREARDP-TLLVNIAA 111 (223)
Q Consensus 57 ~~~~~i~~~~~~~~-~~~~~~~------------------~~~~~~-----~~~i~~l~~~~~~~~~~~~~-~~l~~~~~ 111 (223)
.|.+.|.++.|+++ +.++.+. .+..+. ...|.+++|+ +++ .+|++++.
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------~~~~~~l~~~~~ 235 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH-------PKNSTRVATATG 235 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC-------SSCTTEEEEEEC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC-------CCCCCEEEEEEC
Confidence 56777888888886 4554332 122221 5789999999 776 68888886
Q ss_pred CC-eEEEEEecCCCceEEeeeeec-cccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccc
Q psy3599 112 NA-VCILKVLDKEGAVQLKRKFNV-NHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGH 188 (223)
Q Consensus 112 ~~-~~~v~i~d~~~~~~~~~~~~~-~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h 188 (223)
++ ...+++||..++......+ . +|... +.+ .|+|. ++.+|++++.||.|++||+++ ++++..+.+|
T Consensus 236 d~~~~~i~~~d~~~~~~~~~~~-~~~~~~~---v~~~~~s~~----~~~~l~s~~~dg~v~~wd~~~---~~~~~~~~~~ 304 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANTPLQTL-NQGHQKG---ILSLDWCHQ----DEHLLLSSGRDNTVLLWNPES---AEQLSQFPAR 304 (416)
T ss_dssp CSSSCCCCEEETTSTTSCSBCC-CSCCSSC---EEEEEECSS----CSSCEEEEESSSEEEEECSSS---CCEEEEEECS
T ss_pred CCCCceEEEEeCCCCCCCcEEe-ecCccCc---eeEEEeCCC----CCCeEEEEeCCCCEEEeeCCC---CccceeecCC
Confidence 52 0137889988753332232 3 67777 555 89984 589999999999999999999 8899999999
Q ss_pred ccCEEEEEEecCC-CEEEEEeCCCcEEEeeCCCCC
Q psy3599 189 ACPVLGVSFNYDE-SLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 189 ~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~ 222 (223)
...|.+++|+|++ .+|++++.|+.|++||+.+++
T Consensus 305 ~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 305 GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 9999999999998 899999999999999998754
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.72 E-value=2.4e-16 Score=129.60 Aligned_cols=117 Identities=20% Similarity=0.355 Sum_probs=97.1
Q ss_pred CCCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCce---EEeeeeeccccCcceeEEE-eeecCcccCCCcE
Q psy3599 84 DCPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAV---QLKRKFNVNHKSSKYQVRS-TFCPIMSFREGAC 158 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~---~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~ 158 (223)
...|.+++|+ + ++.+|++++.++ .+++||+.++. .+. .+ ..|... +.+ +|+|. ...+
T Consensus 231 ~~~v~~v~~~-------p~~~~~l~s~~~dg--~i~i~d~~~~~~~~~~~-~~-~~~~~~---v~~i~~~p~----~~~~ 292 (430)
T 2xyi_A 231 TAVVEDVAWH-------LLHESLFGSVADDQ--KLMIWDTRNNNTSKPSH-TV-DAHTAE---VNCLSFNPY----SEFI 292 (430)
T ss_dssp SSCEEEEEEC-------SSCTTEEEEEETTS--EEEEEETTCSCSSSCSE-EE-ECCSSC---EEEEEECSS----CTTE
T ss_pred CCCEeeeEEe-------CCCCCEEEEEeCCC--eEEEEECCCCCCCccee-Ee-ecCCCC---eEEEEeCCC----CCCE
Confidence 7789999999 6 788999999999 89999998662 222 33 377777 555 89994 2348
Q ss_pred EEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCC-CEEEEEeCCCcEEEeeCCC
Q psy3599 159 VVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDE-SLLATSDYQGLIILWSREK 220 (223)
Q Consensus 159 l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~ 220 (223)
+++|+.||.|++||++.. ..++..+..|...|.+++|+|++ .+|++++.|+.|++||++.
T Consensus 293 l~tg~~dg~v~vwd~~~~--~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 293 LATGSADKTVALWDLRNL--KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEEETTSEEEEEETTCT--TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEEEeCCCeEEEEeCCCC--CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 999999999999999872 35688888999999999999998 4799999999999999976
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.3e-16 Score=142.55 Aligned_cols=118 Identities=11% Similarity=0.067 Sum_probs=98.6
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEee----------eeeccccCcceeEEE-eeecCcc
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKR----------KFNVNHKSSKYQVRS-TFCPIMS 152 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~----------~~~~~h~~~~~~i~~-~~s~~~~ 152 (223)
...|++++|+ |++.+|++++.++ .+++||+.++..... .+ .+|... +.+ +|+|.
T Consensus 98 ~~~V~~v~~s-------p~g~~l~sgs~dg--~V~lwd~~~~~~~~~~i~~~~~~~~~~-~~h~~~---V~sl~~sp~-- 162 (902)
T 2oaj_A 98 PGKITSIDTD-------ASLDWMLIGLQNG--SMIVYDIDRDQLSSFKLDNLQKSSFFP-AARLSP---IVSIQWNPR-- 162 (902)
T ss_dssp SSCEEEEECC-------TTCSEEEEEETTS--CEEEEETTTTEEEEEEECCHHHHHTCS-SSCCCC---CCEEEEETT--
T ss_pred CCCEEEEEEC-------CCCCEEEEEcCCC--cEEEEECCCCccccceecccccccccc-ccCCCC---eEEEEEccC--
Confidence 5789999999 9999999999999 899999988764311 11 367776 444 89994
Q ss_pred cCCCcEEEEecCCCcEEEEEcccCcccccceeeccc------------------ccCEEEEEEecCCCEEEEEeCCCcEE
Q psy3599 153 FREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGH------------------ACPVLGVSFNYDESLLATSDYQGLII 214 (223)
Q Consensus 153 ~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h------------------~~~v~~v~~~~~~~~l~s~s~d~~i~ 214 (223)
++..+++|+.||.| +||+++ ++++..+..| ...|.+++|+|++.+|++|+.||+|+
T Consensus 163 --~~~~l~~g~~dg~v-lWd~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~ 236 (902)
T 2oaj_A 163 --DIGTVLISYEYVTL-TYSLVE---NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLV 236 (902)
T ss_dssp --EEEEEEEECSSCEE-EEETTT---TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEE
T ss_pred --CCCEEEEEeCCCcE-EEECCC---CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEE
Confidence 35789999999999 999998 7777777655 57799999999999999999999999
Q ss_pred EeeCCCCC
Q psy3599 215 LWSREKHE 222 (223)
Q Consensus 215 iwd~~~~~ 222 (223)
+||+++++
T Consensus 237 lWd~~~g~ 244 (902)
T 2oaj_A 237 FWDANSGH 244 (902)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 99998765
No 103
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.71 E-value=7.3e-16 Score=126.75 Aligned_cols=146 Identities=14% Similarity=0.247 Sum_probs=112.1
Q ss_pred ccCCcEEEEEECC-CCceeeee---------------------eeeecCCCCeeEEEEeecccccCCCCe-EEEEEeCCC
Q psy3599 57 RSTGVIVSILCDD-LGRLSKGK---------------------RLVLSQDCPITCLSWRSWISREARDPT-LLVNIAANA 113 (223)
Q Consensus 57 ~~~~~i~~~~~~~-~~~~~~~~---------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~-~l~~~~~~~ 113 (223)
+|.+.|..+.|+| ++.++.+. .+..| ...|++++|+ +++. +|++++.++
T Consensus 229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~i~~~-------p~~~~~l~tg~~dg 300 (430)
T 2xyi_A 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH-TAEVNCLSFN-------PYSEFILATGSADK 300 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC-SSCEEEEEEC-------SSCTTEEEEEETTS
T ss_pred CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC-CCCeEEEEeC-------CCCCCEEEEEeCCC
Confidence 6777888888888 44444322 22344 7889999999 7765 788999999
Q ss_pred eEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcc-----------ccc
Q psy3599 114 VCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEH-----------KNA 181 (223)
Q Consensus 114 ~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~-----------~~~ 181 (223)
.+++||+.........+. +|... +.+ .|+|. +..++++++.|+.|++||+..... .++
T Consensus 301 --~v~vwd~~~~~~~~~~~~-~h~~~---v~~i~~sp~----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 370 (430)
T 2xyi_A 301 --TVALWDLRNLKLKLHSFE-SHKDE---IFQVQWSPH----NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 370 (430)
T ss_dssp --EEEEEETTCTTSCSEEEE-CCSSC---EEEEEECSS----CTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTE
T ss_pred --eEEEEeCCCCCCCeEEee-cCCCC---EEEEEECCC----CCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcce
Confidence 899999987433333443 78777 555 89994 236899999999999999986210 145
Q ss_pred ceeecccccCEEEEEEecCCC-EEEEEeCCCcEEEeeCCC
Q psy3599 182 VNKLQGHACPVLGVSFNYDES-LLATSDYQGLIILWSREK 220 (223)
Q Consensus 182 ~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~ 220 (223)
+..+.+|...|.+++|+|++. ++++++.||.|++|++..
T Consensus 371 ~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 371 LFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 667788999999999999998 999999999999999864
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.71 E-value=3.7e-16 Score=129.15 Aligned_cols=119 Identities=19% Similarity=0.180 Sum_probs=97.9
Q ss_pred CCCeeEEEEeecccccCCCCeEE-EEEeCCCeEEEEEecCC--CceEEeeeeeccccCcceeEEE-eeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLL-VNIAANAVCILKVLDKE--GAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l-~~~~~~~~~~v~i~d~~--~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l 159 (223)
...|.+++|+ +++.+| ++++.++ .+++||.. ++..+.......|... +.+ +|+| ++.+|
T Consensus 102 ~~~v~~~~~s-------~d~~~l~~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~---v~~~~~sp-----~~~~l 164 (450)
T 2vdu_B 102 YSYIRNLRLT-------SDESRLIACADSDK--SLLVFDVDKTSKNVLKLRKRFCFSKR---PNAISIAE-----DDTTV 164 (450)
T ss_dssp CCCEEEEEEC-------TTSSEEEEEEGGGT--EEEEEEECSSSSSCEEEEEEEECSSC---EEEEEECT-----TSSEE
T ss_pred CCceEEEEEc-------CCCCEEEEEECCCC--eEEEEECcCCCCceeeeeecccCCCC---ceEEEEcC-----CCCEE
Confidence 3479999999 899886 8888888 89999988 6655543211244455 555 8999 79999
Q ss_pred EEecCCCcEEEEEcccCcccccc----eeecccccCEEEEEEecC---CCEEEEEeCCCcEEEeeCCCCC
Q psy3599 160 VTGSEDSCVYFLDIQSKEHKNAV----NKLQGHACPVLGVSFNYD---ESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~~~~~~~~~----~~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++|+.||.+++|++.. +... ..+.+|...|.+++|+|+ +.+|++|+.|+.|++||+++++
T Consensus 165 ~~~~~~g~v~~~~~~~---~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 165 IIADKFGDVYSIDINS---IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp EEEETTSEEEEEETTS---CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT
T ss_pred EEEeCCCcEEEEecCC---cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc
Confidence 9999999999999987 5543 377889999999999999 9999999999999999998764
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.71 E-value=1.1e-15 Score=130.08 Aligned_cols=145 Identities=14% Similarity=0.132 Sum_probs=118.3
Q ss_pred ccccccCCc-EEEEEECC--CCceeeee--------------------------eeeecCCCCeeEEEEeecccccCCCC
Q psy3599 53 NDQLRSTGV-IVSILCDD--LGRLSKGK--------------------------RLVLSQDCPITCLSWRSWISREARDP 103 (223)
Q Consensus 53 ~~~~~~~~~-i~~~~~~~--~~~~~~~~--------------------------~~~~~~~~~i~~l~~~~~~~~~~~~~ 103 (223)
..+.+|.+. |.++.|+| +++++.+. .+..| ..+|.+++|+ +++
T Consensus 57 ~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s-------~~~ 128 (615)
T 1pgu_A 57 VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL-AGPISDISWD-------FEG 128 (615)
T ss_dssp EEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC-SSCEEEEEEC-------TTS
T ss_pred eEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcc-cccEEEEEEe-------CCC
Confidence 344578888 99999999 88766433 11224 7799999999 999
Q ss_pred eEEEEEeCC----CeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCc-EEEEecCCCcEEEEEcccCc
Q psy3599 104 TLLVNIAAN----AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGA-CVVTGSEDSCVYFLDIQSKE 177 (223)
Q Consensus 104 ~~l~~~~~~----~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~-~l~sgs~dg~v~iwd~~~~~ 177 (223)
.+|++++.+ + .+.+||. +..+. .+ .+|... +.+ .|+| ++. .+++++.|+.|++||..+
T Consensus 129 ~~l~~~~~~~~~~~--~v~~~d~--~~~~~-~~-~~~~~~---v~~~~~~~-----~~~~~l~~~~~d~~v~vwd~~~-- 192 (615)
T 1pgu_A 129 RRLCVVGEGRDNFG--VFISWDS--GNSLG-EV-SGHSQR---INACHLKQ-----SRPMRSMTVGDDGSVVFYQGPP-- 192 (615)
T ss_dssp SEEEEEECCSSCSE--EEEETTT--CCEEE-EC-CSCSSC---EEEEEECS-----SSSCEEEEEETTTEEEEEETTT--
T ss_pred CEEEEeccCCCCcc--EEEEEEC--CCcce-ee-ecCCcc---EEEEEECC-----CCCcEEEEEeCCCcEEEEeCCC--
Confidence 999998876 5 7888983 33443 33 488877 555 8999 565 899999999999999999
Q ss_pred ccccceeeccccc---CEEEEEEecC-CCEEEEEeCCCcEEEeeCCCCC
Q psy3599 178 HKNAVNKLQGHAC---PVLGVSFNYD-ESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 178 ~~~~~~~~~~h~~---~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++++..+.+|.. .|.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 193 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 193 -FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp -BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred -cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 889999999999 9999999999 9999999999999999998765
No 106
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.71 E-value=1.4e-16 Score=129.71 Aligned_cols=130 Identities=11% Similarity=0.102 Sum_probs=96.2
Q ss_pred eeecCCCCeeEEEEeecccc-cCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCc
Q psy3599 79 LVLSQDCPITCLSWRSWISR-EARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGA 157 (223)
Q Consensus 79 ~~~~~~~~i~~l~~~~~~~~-~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~ 157 (223)
+.+| ...|.+++|+|.... .+.++.+|+++++|+ ++++||+.++..+... .+|...+ ...+|+|. ++.
T Consensus 132 ~~gH-~~~v~~v~~~p~~~~~~~~d~~~las~s~D~--tv~~Wd~~~~~~~~~~--~~~~~~v--~~v~~~p~----~~~ 200 (393)
T 4gq1_A 132 KSGH-HNFVNDIDIADVYSADNRLAEQVIASVGDDC--TLIIWRLTDEGPILAG--YPLSSPG--ISVQFRPS----NPN 200 (393)
T ss_dssp TTSC-SSCEEEEEEEEEECTTCSEEEEEEEEEETTS--EEEEEEEETTEEEEEE--EECSSCE--EEEEEETT----EEE
T ss_pred cCCC-CCceEEEEEccccccccCCCCCEEEEEECCC--eEEEEECCCCceeeee--cCCCCCc--EEEEECCC----CCc
Confidence 4556 889999999942111 123889999999999 9999999877666544 4777774 33489994 346
Q ss_pred EEEEecCCCcEEEEEcccCcccccce-------------------------eecccccCEEEEEEe-cCCCEEEEEeCCC
Q psy3599 158 CVVTGSEDSCVYFLDIQSKEHKNAVN-------------------------KLQGHACPVLGVSFN-YDESLLATSDYQG 211 (223)
Q Consensus 158 ~l~sgs~dg~v~iwd~~~~~~~~~~~-------------------------~~~~h~~~v~~v~~~-~~~~~l~s~s~d~ 211 (223)
+|++|+.|+.|++||+++ ++... ...+|...+.++.|. |++..+++++.|+
T Consensus 201 ~l~~~~~d~~v~~wd~~t---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~ 277 (393)
T 4gq1_A 201 QLIVGERNGNIRIFDWTL---NLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG 277 (393)
T ss_dssp EEEEEETTSEEEEEETTC---CC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS
T ss_pred eEEecCCCCEEEEEECCC---CcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC
Confidence 899999999999999987 33221 124677889999987 7899999999999
Q ss_pred cEEEeeCCCCC
Q psy3599 212 LIILWSREKHE 222 (223)
Q Consensus 212 ~i~iwd~~~~~ 222 (223)
++++||++.++
T Consensus 278 ~i~vwd~~~~~ 288 (393)
T 4gq1_A 278 AWLRWNLFANN 288 (393)
T ss_dssp EEEEEEC----
T ss_pred CEEEEECccCC
Confidence 99999987643
No 107
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.71 E-value=3.1e-16 Score=124.71 Aligned_cols=123 Identities=9% Similarity=0.159 Sum_probs=100.1
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCe-EEEEEeC---CCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcc
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPT-LLVNIAA---NAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMS 152 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~-~l~~~~~---~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~ 152 (223)
....| ...|.+++|+ |++. ++++++. ++ .+++||..++....... .+|... +.+ .|+|
T Consensus 13 ~~~~h-~~~v~~~~~~-------p~~~~l~~~~s~~~~d~--~v~iw~~~~~~~~~~~~-~~~~~~---v~~~~~~~--- 75 (357)
T 3i2n_A 13 IQKGF-NYTVFDCKWV-------PCSAKFVTMGNFARGTG--VIQLYEIQHGDLKLLRE-IEKAKP---IKCGTFGA--- 75 (357)
T ss_dssp EEEEC-SSCEEEEEEC-------TTSSEEEEEEC--CCCE--EEEEEEECSSSEEEEEE-EEESSC---EEEEECTT---
T ss_pred hccCC-CCceEEEEEc-------CCCceEEEecCccCCCc--EEEEEeCCCCcccceee-ecccCc---EEEEEEcC---
Confidence 34556 8999999999 8774 5556665 77 89999998876544332 377777 555 8999
Q ss_pred cCC---CcEEEEecCCCcEEEEEcccCcccc-cceeecccccCEEEEEE------ecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 153 FRE---GACVVTGSEDSCVYFLDIQSKEHKN-AVNKLQGHACPVLGVSF------NYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 153 ~~~---~~~l~sgs~dg~v~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~------~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+ +.++++|+.||.|++||+.+ ++ ++..+.+|...|.++.| +|+++.|++++.|+.|++||+++++
T Consensus 76 --~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 76 --TSLQQRYLATGDFGGNLHIWNLEA---PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp --CCTTTCCEEEEETTSCEEEECTTS---CSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred --CCCCCceEEEecCCCeEEEEeCCC---CCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 5 69999999999999999998 66 88899999999999965 6789999999999999999998764
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.70 E-value=1.8e-16 Score=129.07 Aligned_cols=113 Identities=10% Similarity=0.144 Sum_probs=92.4
Q ss_pred CCCeEEEEEeCCCeEEEEEecCCCceEEe----eeeeccccCcceeEEE-eeecCcc---cCCCcEEEEecCCCcEEEEE
Q psy3599 101 RDPTLLVNIAANAVCILKVLDKEGAVQLK----RKFNVNHKSSKYQVRS-TFCPIMS---FREGACVVTGSEDSCVYFLD 172 (223)
Q Consensus 101 ~~~~~l~~~~~~~~~~v~i~d~~~~~~~~----~~~~~~h~~~~~~i~~-~~s~~~~---~~~~~~l~sgs~dg~v~iwd 172 (223)
+++.+|++++.|+ .+++||..++.... ..+ .+|.+. |.+ +|+|... ..++.+|++|+.|++|++||
T Consensus 99 ~~~~~las~~~d~--~v~lw~~~~~~~~~~~~~~~~-~gH~~~---v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 99 VYSLFLACVCQDN--TVRLIITKNETIITQHVLGGK-SGHHNF---VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp EEEEEEEEEETTS--CEEEEEEETTEEEEEEEECTT-TSCSSC---EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEeCCC--cEEEEECCCCccceeeeeccc-CCCCCc---eEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 6677899999999 89999988775432 123 489888 555 7887321 12678999999999999999
Q ss_pred cccCcccccceeecccccCEEEEEEecCC-CEEEEEeCCCcEEEeeCCCCC
Q psy3599 173 IQSKEHKNAVNKLQGHACPVLGVSFNYDE-SLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 173 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+.+ ..++..+..|...|.+++|+|++ .+|++++.|++|++||+++++
T Consensus 173 ~~~---~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 173 LTD---EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EET---TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred CCC---CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 998 77777778899999999999986 589999999999999998764
No 109
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.70 E-value=1.9e-15 Score=122.15 Aligned_cols=147 Identities=15% Similarity=0.161 Sum_probs=112.0
Q ss_pred ccCCcEEEEEECC-CCceeeee----------------eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEE
Q psy3599 57 RSTGVIVSILCDD-LGRLSKGK----------------RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKV 119 (223)
Q Consensus 57 ~~~~~i~~~~~~~-~~~~~~~~----------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 119 (223)
+|.+.|.++.|++ ++.++.+. .........+.++.|++ ..+++.++++++.++ .+++
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~v~~ 170 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSP----VSTKHCLVAVGTRGP--KVQL 170 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECS----SCSSCCEEEEEESSS--SEEE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeec----CCCCCcEEEEEcCCC--eEEE
Confidence 3778899999988 55554332 11122367888999981 112556899999888 8999
Q ss_pred ecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCc-EEEEecCCCcEEEEEcccCcccc-cceee-----------
Q psy3599 120 LDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGA-CVVTGSEDSCVYFLDIQSKEHKN-AVNKL----------- 185 (223)
Q Consensus 120 ~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~-~~~~~----------- 185 (223)
||+.++..+.. + .+|... +.+ .|+| ++. ++++|+.||.|++||++. .. ++..+
T Consensus 171 ~d~~~~~~~~~-~-~~~~~~---v~~~~~~~-----~~~~ll~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~~~~~~ 237 (408)
T 4a11_B 171 CDLKSGSCSHI-L-QGHRQE---ILAVSWSP-----RYDYILATASADSRVKLWDVRR---ASGCLITLDQHNGKKSQAV 237 (408)
T ss_dssp EESSSSCCCEE-E-CCCCSC---EEEEEECS-----SCTTEEEEEETTSCEEEEETTC---SSCCSEECCTTTTCSCCCT
T ss_pred EeCCCcceeee-e-cCCCCc---EEEEEECC-----CCCcEEEEEcCCCcEEEEECCC---CCcccccccccccccceee
Confidence 99988765553 3 378777 555 8999 566 699999999999999987 33 33333
Q ss_pred ----cccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 186 ----QGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 186 ----~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+|...|.+++|+|++.+|++++.||.|++||+++++
T Consensus 238 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 238 ESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred ccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 6788999999999999999999999999999998764
No 110
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.70 E-value=9.4e-17 Score=132.49 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=96.2
Q ss_pred CCCeeEEEEeecccccCCCCeEEE----EEeCCCeEEEEEecCCCc--------eEE--eeeeeccccCcceeEEE-eee
Q psy3599 84 DCPITCLSWRSWISREARDPTLLV----NIAANAVCILKVLDKEGA--------VQL--KRKFNVNHKSSKYQVRS-TFC 148 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~----~~~~~~~~~v~i~d~~~~--------~~~--~~~~~~~h~~~~~~i~~-~~s 148 (223)
...|.+++|+ +++.+|+ +++.++ .+++||+.++ ..+ ...+ .+|... +.+ +|+
T Consensus 92 ~~~v~~l~~s-------pdg~~lav~~~sgs~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~---V~~v~~~ 158 (434)
T 2oit_A 92 KFPIHHLALS-------CDNLTLSACMMSSEYGS--IIAFFDVRTFSNEAKQQKRPFAYHKLL-KDAGGM---VIDMKWN 158 (434)
T ss_dssp SSCEEEEEEC-------TTSCEEEEEEEETTTEE--EEEEEEHHHHHCTTCSSCCCSEEEECC-CSGGGS---EEEEEEC
T ss_pred CCcccEEEEc-------CCCCEEEEEEeccCCCc--eEEEEEccccccCCcCCcceeeeeecc-CCCCCc---eEEEEEC
Confidence 5679999999 9999999 677788 8999997654 111 1222 367777 555 899
Q ss_pred cCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 149 PIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 149 ~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
|. ++.+|++++.||.|++||+++ +..+....+|...|.+++|+|+|.+|++|+.||.|++||++
T Consensus 159 p~----~~~~las~s~Dg~v~iwD~~~---~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 159 PT----VPSMVAVCLADGSIAVLQVTE---TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp SS----CTTEEEEEETTSCEEEEEESS---SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CC----CCCEEEEEECCCeEEEEEcCC---CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 94 388999999999999999998 66666677789999999999999999999999999999987
No 111
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.3e-15 Score=118.99 Aligned_cols=119 Identities=16% Similarity=0.288 Sum_probs=98.0
Q ss_pred eeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCc
Q psy3599 79 LVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGA 157 (223)
Q Consensus 79 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~ 157 (223)
+..| ..++.++.|.| +++.+|++++.++ .+++||... .+. .+...|... +.+ .|+| ++.
T Consensus 138 ~~~~-~~~v~~~~~~~------~~~~~l~~~~~d~--~i~i~d~~~--~~~-~~~~~~~~~---i~~~~~~~-----~~~ 197 (313)
T 3odt_A 138 LQAH-NASVWDAKVVS------FSENKFLTASADK--TIKLWQNDK--VIK-TFSGIHNDV---VRHLAVVD-----DGH 197 (313)
T ss_dssp EECC-SSCEEEEEEEE------TTTTEEEEEETTS--CEEEEETTE--EEE-EECSSCSSC---EEEEEEEE-----TTE
T ss_pred cccC-CCceeEEEEcc------CCCCEEEEEECCC--CEEEEecCc--eEE-EEeccCccc---EEEEEEcC-----CCe
Confidence 3445 88999999982 4899999999988 899999432 333 232236666 555 8998 566
Q ss_pred EEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 158 CVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 158 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+++|+.||.|++||+++ ++++..+.+|...|.+++|+|++ .|++++.||.|++||+++++
T Consensus 198 -~~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 198 -FISCSNDGLIKLVDMHT---GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp -EEEEETTSEEEEEETTT---CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC
T ss_pred -EEEccCCCeEEEEECCc---hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc
Confidence 99999999999999999 88999999999999999999999 58899999999999998865
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.69 E-value=4.7e-16 Score=142.73 Aligned_cols=122 Identities=20% Similarity=0.262 Sum_probs=108.8
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
.+..| ...|++++|+ +++.+|++++.++ .+++||..++..+... .+|... +.+ +|+| ++
T Consensus 610 ~~~~h-~~~v~~~~~s-------~~~~~l~s~~~d~--~i~vw~~~~~~~~~~~--~~h~~~---v~~~~~s~-----~~ 669 (1249)
T 3sfz_A 610 VVRPH-TDAVYHACFS-------QDGQRIASCGADK--TLQVFKAETGEKLLDI--KAHEDE---VLCCAFSS-----DD 669 (1249)
T ss_dssp EECCC-SSCEEEEEEC-------TTSSEEEEEETTS--CEEEEETTTCCEEEEE--CCCSSC---EEEEEECT-----TS
T ss_pred EEecc-cccEEEEEEC-------CCCCEEEEEeCCC--eEEEEECCCCCEEEEe--ccCCCC---EEEEEEec-----CC
Confidence 34566 8999999999 9999999999999 8999999998776643 488888 555 8999 79
Q ss_pred cEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEec--CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNY--DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.++++|+.||.|++||+.+ ++++..+.+|...|.++.|+| ++.++++|+.|+.|++||+++++
T Consensus 670 ~~l~s~~~d~~v~vwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 670 SYIATCSADKKVKIWDSAT---GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734 (1249)
T ss_dssp SEEEEEETTSEEEEEETTT---CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred CEEEEEeCCCeEEEEECCC---CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence 9999999999999999999 899999999999999999999 56689999999999999998764
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.69 E-value=3.1e-15 Score=117.13 Aligned_cols=130 Identities=19% Similarity=0.310 Sum_probs=105.5
Q ss_pred CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeec
Q psy3599 70 LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCP 149 (223)
Q Consensus 70 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~ 149 (223)
+|+++.......| ...|++++|+ +++.+|++|+.|+ .+++|+..+++.+... .+|... +.+ +++
T Consensus 54 tg~~~~~~~~~~~-~~~V~~v~~~-------~~~~~l~sgs~Dg--~v~iw~~~~~~~~~~~--~~h~~~---~~~-~~~ 117 (318)
T 4ggc_A 54 SGDILQLLQMEQP-GEYISSVAWI-------KEGNYLAVGTSSA--EVQLWDVQQQKRLRNM--TSHSAR---VGS-LSW 117 (318)
T ss_dssp TCCEEEEEECCST-TCCEEEEEEC-------TTSSEEEEEETTS--EEEEEETTTTEEEEEE--ECCSSC---EEE-EEE
T ss_pred CCCEEEEEEecCC-CCeEEEEEEC-------CCCCEEEEEECCC--cEEEeecCCceeEEEe--cCccce---EEE-eec
Confidence 3444443233334 7789999999 9999999999999 9999999999877643 488776 333 344
Q ss_pred CcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 150 IMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 150 ~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++..+++|+.++.+++|+.... ...+..+.+|...+..+.+++++.++++++.|+.|++||+++++
T Consensus 118 -----~~~~l~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 118 -----NSYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp -----ETTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred -----CCCEEEEEecCCceEeeecCCC--ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 5789999999999999998872 35567788999999999999999999999999999999998754
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.69 E-value=2.5e-15 Score=123.11 Aligned_cols=117 Identities=21% Similarity=0.342 Sum_probs=100.7
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
...|++++|+ ++|.+|++|+.|+ .+++||..++..+... .+|... +.+ +++ ++.++++|+
T Consensus 147 ~~~V~sv~fs-------pdg~~lasgs~Dg--~v~iWd~~~~~~~~~~--~~h~~~---v~~-~s~-----~~~~l~sgs 206 (420)
T 4gga_A 147 GEYISSVAWI-------KEGNYLAVGTSSA--EVQLWDVQQQKRLRNM--TSHSAR---VGS-LSW-----NSYILSSGS 206 (420)
T ss_dssp TCCEEEEEEC-------TTSSEEEEEETTS--CEEEEETTTTEEEEEE--CCCSSC---EEE-EEE-----ETTEEEEEE
T ss_pred CCcEEEEEEC-------CCCCEEEEEECCC--eEEEEEcCCCcEEEEE--eCCCCc---eEE-Eee-----CCCEEEEEe
Confidence 6789999999 9999999999999 8999999999877643 488777 443 233 478999999
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.|+.+++||.... ...+..+.+|...+..+.|+|++..+++++.|+.+++||..+++
T Consensus 207 ~d~~i~~~d~~~~--~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 207 RSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp TTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred CCCceeEeeeccc--ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 9999999998872 34567888999999999999999999999999999999998754
No 115
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.68 E-value=2.1e-15 Score=124.70 Aligned_cols=120 Identities=21% Similarity=0.341 Sum_probs=101.3
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
.+..|....+.++.+. +.+|++++.|+ .+++||..++..+.. + .+|... +.+ .|+| ++
T Consensus 116 ~l~~h~~~v~~~~~~~---------~~~l~sgs~dg--~i~vwd~~~~~~~~~-~-~~h~~~---V~~l~~~~-----~~ 174 (464)
T 3v7d_B 116 TLRGHMTSVITCLQFE---------DNYVITGADDK--MIRVYDSINKKFLLQ-L-SGHDGG---VWALKYAH-----GG 174 (464)
T ss_dssp EEECCSSSCEEEEEEE---------TTEEEEEETTS--CEEEEETTTTEEEEE-E-CCCSSC---EEEEEECS-----TT
T ss_pred EEcCCCCCcEEEEEEC---------CCEEEEEcCCC--cEEEEECCCCcEEEE-E-eCCCcC---EEEEEEcC-----CC
Confidence 5667744456777765 56999999999 899999999876664 4 489888 555 8888 45
Q ss_pred cEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEec--CCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNY--DESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+++|+.||.|++||+++ ++++..+.+|...|.+++|++ ++.++++++.|+.|++||+++++
T Consensus 175 -~l~s~s~dg~i~vwd~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 175 -ILVSGSTDRTVRVWDIKK---GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp -EEEEEETTSCEEEEETTT---TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCC
T ss_pred -EEEEEeCCCCEEEEECCC---CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCc
Confidence 999999999999999999 889999999999999999994 67899999999999999998754
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.67 E-value=6.2e-16 Score=122.45 Aligned_cols=116 Identities=14% Similarity=0.132 Sum_probs=98.6
Q ss_pred eecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCce---EEeeeeeccccCcceeEEE-eeecCcccCC
Q psy3599 80 VLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAV---QLKRKFNVNHKSSKYQVRS-TFCPIMSFRE 155 (223)
Q Consensus 80 ~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~---~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~ 155 (223)
..| ...|++++|+ +++.+|++++.++ .+++|+..++. .+. .+ .+|... +.+ +|+| +
T Consensus 8 ~~h-~~~v~~~~~s-------~~~~~l~~~~~d~--~v~iw~~~~~~~~~~~~-~~-~~~~~~---v~~~~~~~-----~ 67 (342)
T 1yfq_A 8 QAP-KDYISDIKII-------PSKSLLLITSWDG--SLTVYKFDIQAKNVDLL-QS-LRYKHP---LLCCNFID-----N 67 (342)
T ss_dssp SCC-SSCEEEEEEE-------GGGTEEEEEETTS--EEEEEEEETTTTEEEEE-EE-EECSSC---EEEEEEEE-----S
T ss_pred cCC-CCcEEEEEEc-------CCCCEEEEEcCCC--eEEEEEeCCCCccccce-ee-eecCCc---eEEEEECC-----C
Confidence 345 8899999999 8999999999999 89999987665 222 22 377777 555 8999 7
Q ss_pred Cc-EEEEecCCCcEEEEEc-ccCcccccceeecc--cccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 156 GA-CVVTGSEDSCVYFLDI-QSKEHKNAVNKLQG--HACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 156 ~~-~l~sgs~dg~v~iwd~-~~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
+. ++++|+.||.|++||+ .. ++ ...+.+ |...|.+++|+| +..|++++.|+.|++||+++
T Consensus 68 ~~~~l~~~~~dg~i~~wd~~~~---~~-~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 68 TDLQIYVGTVQGEILKVDLIGS---PS-FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp SSEEEEEEETTSCEEEECSSSS---SS-EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred CCcEEEEEcCCCeEEEEEeccC---Cc-eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 99 9999999999999999 77 54 477788 999999999999 99999999999999999875
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.65 E-value=6.7e-15 Score=116.49 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=95.1
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCC-ceEEeeeeeccccCcceeEEE-eeec-CcccCCCcEEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEG-AVQLKRKFNVNHKSSKYQVRS-TFCP-IMSFREGACVV 160 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~-~~~~~~~~~~~h~~~~~~i~~-~~s~-~~~~~~~~~l~ 160 (223)
...|.+++|+ +++ +++++.++ .+++||..+ +..........|... +.+ .|+| . +.+++
T Consensus 150 ~~~v~~~~~~-------~~~--l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~---i~~i~~~~~~-----~~~l~ 210 (342)
T 1yfq_A 150 KNKIFTMDTN-------SSR--LIVGMNNS--QVQWFRLPLCEDDNGTIEESGLKYQ---IRDVALLPKE-----QEGYA 210 (342)
T ss_dssp CCCEEEEEEC-------SSE--EEEEESTT--EEEEEESSCCTTCCCEEEECSCSSC---EEEEEECSGG-----GCEEE
T ss_pred CCceEEEEec-------CCc--EEEEeCCC--eEEEEECCccccccceeeecCCCCc---eeEEEECCCC-----CCEEE
Confidence 6789999999 666 78888888 899999987 433222222356555 555 8888 5 78999
Q ss_pred EecCCCcEEEEEcccCccc------ccceeeccccc---------CEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 161 TGSEDSCVYFLDIQSKEHK------NAVNKLQGHAC---------PVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 161 sgs~dg~v~iwd~~~~~~~------~~~~~~~~h~~---------~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|+.||.+++|+++. . +....+..|.. .|.+++|+|++.+|++++.||.|++||+++++
T Consensus 211 ~~~~dg~i~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 211 CSSIDGRVAVEFFDD---QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp EEETTSEEEEEECCT---TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred EEecCCcEEEEEEcC---CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 999999999999988 5 67778888765 99999999999999999999999999998764
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.64 E-value=1e-14 Score=120.11 Aligned_cols=116 Identities=23% Similarity=0.374 Sum_probs=93.5
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
.+..| ..+|.++.|+ +.+|++++.|+ .+++||..++..+.. + .+|... +.+ .|+ +
T Consensus 154 ~~~~h-~~~v~~~~~~---------~~~l~s~~~dg--~i~vwd~~~~~~~~~-~-~~h~~~---v~~~~~~-------~ 209 (445)
T 2ovr_B 154 TLVGH-TGGVWSSQMR---------DNIIISGSTDR--TLKVWNAETGECIHT-L-YGHTST---VRCMHLH-------E 209 (445)
T ss_dssp ECCCC-SSCEEEEEEE---------TTEEEEEETTS--CEEEEETTTTEEEEE-E-CCCSSC---EEEEEEE-------T
T ss_pred EEcCC-CCCEEEEEec---------CCEEEEEeCCC--eEEEEECCcCcEEEE-E-CCCCCc---EEEEEec-------C
Confidence 34556 7899999997 45899999888 899999998876654 3 478777 554 563 5
Q ss_pred cEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
..+++|+.||.|++||+.+ ++++..+.+|...|.++.| ++..+++|+.||.|++||+++++
T Consensus 210 ~~l~s~s~dg~i~~wd~~~---~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~ 270 (445)
T 2ovr_B 210 KRVVSGSRDATLRVWDIET---GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET 270 (445)
T ss_dssp TEEEEEETTSEEEEEESSS---CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE
T ss_pred CEEEEEeCCCEEEEEECCC---CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc
Confidence 6788999999999999988 7888888888888988888 67788888889999999887653
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.64 E-value=5e-15 Score=121.75 Aligned_cols=116 Identities=23% Similarity=0.389 Sum_probs=92.9
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREG 156 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~ 156 (223)
.+..| ...|.++.|+ +.+|++++.++ .+++||..++..+.. + .+|... +.+ .| ++
T Consensus 291 ~~~~~-~~~v~~~~~~---------~~~l~~g~~dg--~i~iwd~~~~~~~~~-~-~~h~~~---v~~~~~-------~~ 346 (435)
T 1p22_A 291 TLNGH-KRGIACLQYR---------DRLVVSGSSDN--TIRLWDIECGACLRV-L-EGHEEL---VRCIRF-------DN 346 (435)
T ss_dssp EEECC-SSCEEEEEEE---------TTEEEEEETTS--CEEEEETTTCCEEEE-E-CCCSSC---EEEEEC-------CS
T ss_pred EEcCC-CCcEEEEEeC---------CCEEEEEeCCC--eEEEEECCCCCEEEE-E-eCCcCc---EEEEEe-------cC
Confidence 34445 7788888886 57899999888 899999998877664 3 478777 554 55 47
Q ss_pred cEEEEecCCCcEEEEEcccCcccc---------cceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKN---------AVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~---------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.++++|+.||.|++||+.+ +. ++..+.+|...|.+++| ++..|++++.||.|++||+.+..
T Consensus 347 ~~l~sg~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVA---ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp SEEEEEETTSCEEEEEHHH---HTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CEEEEEeCCCcEEEEECCC---CCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 8999999999999999987 55 77888999999999999 78889999999999999987643
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.63 E-value=4.2e-15 Score=119.32 Aligned_cols=124 Identities=12% Similarity=0.190 Sum_probs=96.7
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE-EEEecCCCceEEeeeeecc-ccCcceeEEE-eeecCcccC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCI-LKVLDKEGAVQLKRKFNVN-HKSSKYQVRS-TFCPIMSFR 154 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~-v~i~d~~~~~~~~~~~~~~-h~~~~~~i~~-~~s~~~~~~ 154 (223)
.+..| ..+|++++|+ |++.+|++++.|+ . +++||..++..+.... .+ |... +.+ +|+|
T Consensus 190 ~~~~h-~~~v~~~~~s-------~~g~~l~s~s~d~--~~v~iwd~~~~~~~~~~~-~g~h~~~---v~~~~~s~----- 250 (355)
T 3vu4_A 190 LIKAH-TNPIKMVRLN-------RKSDMVATCSQDG--TIIRVFKTEDGVLVREFR-RGLDRAD---VVDMKWST----- 250 (355)
T ss_dssp EECCC-SSCEEEEEEC-------TTSSEEEEEETTC--SEEEEEETTTCCEEEEEE-CTTCCSC---EEEEEECT-----
T ss_pred EEEcc-CCceEEEEEC-------CCCCEEEEEeCCC--CEEEEEECCCCcEEEEEE-cCCCCCc---EEEEEECC-----
Confidence 45566 8899999999 9999999999998 8 9999999887776542 25 7776 665 8999
Q ss_pred CCcEEEEecCCCcEEEEEcccCcccccceeec---------------------ccccCEEEEEEecCCCEEEEEeCCCcE
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQ---------------------GHACPVLGVSFNYDESLLATSDYQGLI 213 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~---------------------~h~~~v~~v~~~~~~~~l~s~s~d~~i 213 (223)
++.+|++|+.|+.|++||++... ......+. .+......++|++++..+++++.||.+
T Consensus 251 ~~~~l~s~s~d~~v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~ 329 (355)
T 3vu4_A 251 DGSKLAVVSDKWTLHVFEIFNDQ-DNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMI 329 (355)
T ss_dssp TSCEEEEEETTCEEEEEESSCCS-CCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEE
T ss_pred CCCEEEEEECCCEEEEEEccCCC-CcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeE
Confidence 79999999999999999997611 11111111 112223668999999999999999999
Q ss_pred EEeeCCCC
Q psy3599 214 ILWSREKH 221 (223)
Q Consensus 214 ~iwd~~~~ 221 (223)
++|++..+
T Consensus 330 ~~~~~~~~ 337 (355)
T 3vu4_A 330 ETFKVVFD 337 (355)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 99998654
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.63 E-value=3.4e-14 Score=116.98 Aligned_cols=115 Identities=25% Similarity=0.407 Sum_probs=97.2
Q ss_pred eeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCc
Q psy3599 79 LVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGA 157 (223)
Q Consensus 79 ~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~ 157 (223)
+..| ...|.++.|+ +..|++++.++ .+++||..++..+.. + .+|... +.+ .| ++.
T Consensus 195 ~~~h-~~~v~~~~~~---------~~~l~s~s~dg--~i~~wd~~~~~~~~~-~-~~~~~~---v~~~~~-------~~~ 250 (445)
T 2ovr_B 195 LYGH-TSTVRCMHLH---------EKRVVSGSRDA--TLRVWDIETGQCLHV-L-MGHVAA---VRCVQY-------DGR 250 (445)
T ss_dssp ECCC-SSCEEEEEEE---------TTEEEEEETTS--EEEEEESSSCCEEEE-E-ECCSSC---EEEEEE-------CSS
T ss_pred ECCC-CCcEEEEEec---------CCEEEEEeCCC--EEEEEECCCCcEEEE-E-cCCccc---EEEEEE-------CCC
Confidence 3445 7889999987 45689999999 899999998876654 3 478777 554 55 478
Q ss_pred EEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 158 CVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 158 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+++|+.||.|++||+++ ++++..+.+|...|.++.| ++..+++++.|+.|++||+++++
T Consensus 251 ~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 251 RVVSGAYDFMVKVWDPET---ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp CEEEEETTSCEEEEEGGG---TEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEEEcCCCEEEEEECCC---CcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC
Confidence 899999999999999999 8899999999999999998 78899999999999999998765
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.63 E-value=1.4e-14 Score=119.13 Aligned_cols=113 Identities=20% Similarity=0.397 Sum_probs=96.0
Q ss_pred eecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcE
Q psy3599 80 VLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGAC 158 (223)
Q Consensus 80 ~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~ 158 (223)
..| ...|.+++|. +.+|++++.++ .+++||..++..+.. + .+|... +.+ .+ ++.+
T Consensus 253 ~~~-~~~v~~~~~~---------~~~l~s~~~dg--~i~vwd~~~~~~~~~-~-~~~~~~---v~~~~~-------~~~~ 308 (435)
T 1p22_A 253 VGH-RAAVNVVDFD---------DKYIVSASGDR--TIKVWNTSTCEFVRT-L-NGHKRG---IACLQY-------RDRL 308 (435)
T ss_dssp CCC-SSCEEEEEEE---------TTEEEEEETTS--EEEEEETTTCCEEEE-E-ECCSSC---EEEEEE-------ETTE
T ss_pred cCC-CCcEEEEEeC---------CCEEEEEeCCC--eEEEEECCcCcEEEE-E-cCCCCc---EEEEEe-------CCCE
Confidence 344 7788888876 67899999999 899999998876664 3 478777 554 55 3679
Q ss_pred EEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 159 VVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 159 l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
+++|+.||.|++||+++ ++++..+.+|...|.+++| ++.+|++|+.||.|++||++++
T Consensus 309 l~~g~~dg~i~iwd~~~---~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIEC---GACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EEEEETTSCEEEEETTT---CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHH
T ss_pred EEEEeCCCeEEEEECCC---CCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCC
Confidence 99999999999999999 8999999999999999998 7889999999999999998643
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.58 E-value=2.6e-14 Score=113.09 Aligned_cols=97 Identities=7% Similarity=0.005 Sum_probs=66.6
Q ss_pred EEEEecCCC-ceEEeeeeeccccCcceeEEEeeec-CcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccccc---
Q psy3599 116 ILKVLDKEG-AVQLKRKFNVNHKSSKYQVRSTFCP-IMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHAC--- 190 (223)
Q Consensus 116 ~v~i~d~~~-~~~~~~~~~~~h~~~~~~i~~~~s~-~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~--- 190 (223)
.|++|++.+ ++.+.. . .+|...+..+ +|+| .+ ++..|++|+.|++|++||+.+ ++++.++.+|..
T Consensus 158 ~V~~~~~s~dG~~~~s-~-~~~~~~v~~l--~fs~~~g---~~~~LaSgS~D~TIkIWDl~T---Gk~l~tL~g~~~~v~ 227 (356)
T 2w18_A 158 QVEVMTFAEDGGGKEN-Q-FLMPPEETIL--TFAEVQG---MQEALLGTTIMNNIVIWNLKT---GQLLKKMHIDDSYQA 227 (356)
T ss_dssp EEEEEEECTTSCEEEE-E-EECCCSSCEE--EEEEEET---STTEEEEEETTSEEEEEETTT---CCEEEEEECCC---C
T ss_pred cEEEEEECCCCceeee-e-ccCCCceeeE--EeeccCC---CCceEEEecCCCcEEEEECCC---CcEEEEEcCCCccee
Confidence 566666633 433332 2 2555553212 3444 11 568999999999999999999 999999987543
Q ss_pred CEEEEEEecCCCEE------------EEEeCCCcEEEeeCCCCC
Q psy3599 191 PVLGVSFNYDESLL------------ATSDYQGLIILWSREKHE 222 (223)
Q Consensus 191 ~v~~v~~~~~~~~l------------~s~s~d~~i~iwd~~~~~ 222 (223)
.+.+++|+|++.++ ++|+.|++|++||..+++
T Consensus 228 ~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 228 SVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp CCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred eeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 67788999999876 668889999999988764
No 124
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.55 E-value=2.4e-13 Score=112.07 Aligned_cols=141 Identities=14% Similarity=0.124 Sum_probs=104.3
Q ss_pred ccCCcEEEEEECCCCceee----ee-------e----------------------eeecCCCCeeEEEEeecccccCCC-
Q psy3599 57 RSTGVIVSILCDDLGRLSK----GK-------R----------------------LVLSQDCPITCLSWRSWISREARD- 102 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~----~~-------~----------------------~~~~~~~~i~~l~~~~~~~~~~~~- 102 (223)
.+.+.|.+++|+++|+.+. +. . +..| ...|.+++|+ |+
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~-------p~~ 161 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA-GGMVIDMKWN-------PTV 161 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG-GGSEEEEEEC-------SSC
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCC-CCceEEEEEC-------CCC
Confidence 3456799999999888776 21 0 1113 6789999999 66
Q ss_pred CeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCccccc
Q psy3599 103 PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNA 181 (223)
Q Consensus 103 ~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~ 181 (223)
+.+|++++.|+ .+++||+.++..+... .+|... +.+ +|+| ++.+|++|+.||.|++||.+. . .
T Consensus 162 ~~~las~s~Dg--~v~iwD~~~~~~~~~~--~~~~~~---v~~v~wsp-----dg~~lasgs~dg~v~iwd~~~---~-~ 225 (434)
T 2oit_A 162 PSMVAVCLADG--SIAVLQVTETVKVCAT--LPSTVA---VTSVCWSP-----KGKQLAVGKQNGTVVQYLPTL---Q-E 225 (434)
T ss_dssp TTEEEEEETTS--CEEEEEESSSEEEEEE--ECGGGC---EEEEEECT-----TSSCEEEEETTSCEEEECTTC---C-E
T ss_pred CCEEEEEECCC--eEEEEEcCCCcceeec--cCCCCc---eeEEEEcC-----CCCEEEEEcCCCcEEEEccCC---c-c
Confidence 88999999999 8999999887554432 367766 555 8999 799999999999999999873 1 1
Q ss_pred ceeec-------ccccCEEEEEEecCCCEEEEEe-CCC------cEEEeeCCCC
Q psy3599 182 VNKLQ-------GHACPVLGVSFNYDESLLATSD-YQG------LIILWSREKH 221 (223)
Q Consensus 182 ~~~~~-------~h~~~v~~v~~~~~~~~l~s~s-~d~------~i~iwd~~~~ 221 (223)
...+. .|...|.++.|++++.++++.+ .|| .+++|++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 226 KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 22222 2334799999999887775533 443 3899999864
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.51 E-value=2.4e-12 Score=103.78 Aligned_cols=116 Identities=15% Similarity=0.146 Sum_probs=90.7
Q ss_pred CCCeeEEEEeecccccCCCCeEEE-EEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEE-EE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLV-NIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACV-VT 161 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l-~s 161 (223)
...+.+++|+ +++.+|+ +++.++ .+++||..++..+... .+...+ ....|+| ++..+ ++
T Consensus 73 ~~~v~~~~~s-------pdg~~l~~~~~~~~--~v~v~d~~~~~~~~~~---~~~~~~--~~~~~s~-----dg~~l~~~ 133 (391)
T 1l0q_A 73 GSSPQGVAVS-------PDGKQVYVTNMASS--TLSVIDTTSNTVAGTV---KTGKSP--LGLALSP-----DGKKLYVT 133 (391)
T ss_dssp SSSEEEEEEC-------TTSSEEEEEETTTT--EEEEEETTTTEEEEEE---ECSSSE--EEEEECT-----TSSEEEEE
T ss_pred CCCccceEEC-------CCCCEEEEEECCCC--EEEEEECCCCeEEEEE---eCCCCc--ceEEECC-----CCCEEEEE
Confidence 4489999999 8888775 555668 8999999988766542 233332 3338999 67766 78
Q ss_pred ecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEE-EEEeCCCcEEEeeCCCCC
Q psy3599 162 GSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLL-ATSDYQGLIILWSREKHE 222 (223)
Q Consensus 162 gs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~ 222 (223)
++.|+.|++||+.+ ++.+..+..+. .+.+++|+|++..+ ++++.++.|++||+++++
T Consensus 134 ~~~~~~v~~~d~~~---~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 134 NNGDKTVSVINTVT---KAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp ETTTTEEEEEETTT---TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred eCCCCEEEEEECCC---CcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 89999999999998 88888877654 57999999999877 677789999999998754
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.49 E-value=4.1e-12 Score=102.45 Aligned_cols=141 Identities=11% Similarity=0.127 Sum_probs=104.0
Q ss_pred CCcEEEEEECCCCceeee-e----------------eeeecCCCCeeEEEEeecccccCCCCeEE-EEEeCCCeEEEEEe
Q psy3599 59 TGVIVSILCDDLGRLSKG-K----------------RLVLSQDCPITCLSWRSWISREARDPTLL-VNIAANAVCILKVL 120 (223)
Q Consensus 59 ~~~i~~~~~~~~~~~~~~-~----------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l-~~~~~~~~~~v~i~ 120 (223)
.+.+..+.|+|+++.+.. . .........+.+++|+ +++..| ++++.++ .+++|
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s-------~dg~~l~~~~~~~~--~v~~~ 143 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALS-------PDGKKLYVTNNGDK--TVSVI 143 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEEC-------TTSSEEEEEETTTT--EEEEE
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEEC-------CCCCEEEEEeCCCC--EEEEE
Confidence 347778888887764421 1 1111225578899999 888876 6777788 89999
Q ss_pred cCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEE-EEecCCCcEEEEEcccCcccccceeecccccCEEEEEEec
Q psy3599 121 DKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACV-VTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNY 199 (223)
Q Consensus 121 d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l-~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~ 199 (223)
|..+++.+... . .+ ..+ ....|+| ++..+ ++++.++.|++||+++ ++++..+. +...+.+++|+|
T Consensus 144 d~~~~~~~~~~-~-~~-~~~--~~~~~~~-----dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~-~~~~~~~~~~~~ 209 (391)
T 1l0q_A 144 NTVTKAVINTV-S-VG-RSP--KGIAVTP-----DGTKVYVANFDSMSISVIDTVT---NSVIDTVK-VEAAPSGIAVNP 209 (391)
T ss_dssp ETTTTEEEEEE-E-CC-SSE--EEEEECT-----TSSEEEEEETTTTEEEEEETTT---TEEEEEEE-CSSEEEEEEECT
T ss_pred ECCCCcEEEEE-e-cC-CCc--ceEEECC-----CCCEEEEEeCCCCEEEEEECCC---CeEEEEEe-cCCCccceEECC
Confidence 99988766542 2 33 332 3337999 67666 7888999999999998 77777666 456789999999
Q ss_pred CCCEEEEEe---CCCcEEEeeCCCCC
Q psy3599 200 DESLLATSD---YQGLIILWSREKHE 222 (223)
Q Consensus 200 ~~~~l~s~s---~d~~i~iwd~~~~~ 222 (223)
++..+++++ .++.|++||+++++
T Consensus 210 ~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 210 EGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp TSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred CCCEEEEEecCcCCCcEEEEECCCCe
Confidence 999888887 68999999998754
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.46 E-value=6.5e-13 Score=108.55 Aligned_cols=119 Identities=9% Similarity=0.035 Sum_probs=96.4
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeee---ccccCcceeEEE-eeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFN---VNHKSSKYQVRS-TFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~---~~h~~~~~~i~~-~~s~~~~~~~~~~l 159 (223)
...+.+++|+ +++.++++++.++ .+++||..++..+..... .+|... +.+ .|+| ++.++
T Consensus 122 ~~~~~~~~~s-------~~~~~~~~~~~~~--~i~~~d~~~g~~~~~~~~~~~~~~~~~---v~~~~~~~-----~~~~~ 184 (433)
T 3bws_A 122 GFQPKSVRFI-------DNTRLAIPLLEDE--GMDVLDINSGQTVRLSPPEKYKKKLGF---VETISIPE-----HNELW 184 (433)
T ss_dssp SSCBCCCEES-------SSSEEEEEBTTSS--SEEEEETTTCCEEEECCCHHHHTTCCE---EEEEEEGG-----GTEEE
T ss_pred CCCceEEEEe-------CCCeEEEEeCCCC--eEEEEECCCCeEeeecCcccccccCCc---eeEEEEcC-----CCEEE
Confidence 3456689999 7888888888887 789999998866542110 256555 555 7888 79999
Q ss_pred EEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEE-EEeCCCcEEEeeCCCCC
Q psy3599 160 VTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLA-TSDYQGLIILWSREKHE 222 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~~ 222 (223)
++++.|+.|++||+++ ++.+..+..|...+.+++|+|++..++ +++.|+.|++||+++++
T Consensus 185 ~s~~~d~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 185 VSQMQANAVHVFDLKT---LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp EEEGGGTEEEEEETTT---CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred EEECCCCEEEEEECCC---ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc
Confidence 9999999999999998 888888888999999999999998775 55579999999998754
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.45 E-value=5.6e-12 Score=102.99 Aligned_cols=142 Identities=8% Similarity=0.114 Sum_probs=104.9
Q ss_pred ccCCcEEEEEECCCCceeeee------------------eeeecCCCCeeEEEEeecccccCCCCeEEE-EEeCCCeEEE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK------------------RLVLSQDCPITCLSWRSWISREARDPTLLV-NIAANAVCIL 117 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~v 117 (223)
+|.+.|..+.++++++++.+. .+..+ ...+.+++|+ +++.+++ +++.++ .+
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~l~~~~~~~~--~i 236 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT-GKWSKILLYD-------PIRDLVYCSNWISE--DI 236 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS-SSSEEEEEEE-------TTTTEEEEEETTTT--EE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC-CCCeeEEEEc-------CCCCEEEEEecCCC--cE
Confidence 566778888887777665432 22233 6789999999 8887775 555778 89
Q ss_pred EEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec--------CCCcEEEEEcccCcccccceeecccc
Q psy3599 118 KVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS--------EDSCVYFLDIQSKEHKNAVNKLQGHA 189 (223)
Q Consensus 118 ~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs--------~dg~v~iwd~~~~~~~~~~~~~~~h~ 189 (223)
++||..++..+... .+...+ ....|+| ++..+++++ .|+.|++||+.+ ++.+..+ .|.
T Consensus 237 ~~~d~~~~~~~~~~---~~~~~~--~~~~~~~-----~g~~l~~~~~~~~~~~~~dg~i~~~d~~~---~~~~~~~-~~~ 302 (433)
T 3bws_A 237 SVIDRKTKLEIRKT---DKIGLP--RGLLLSK-----DGKELYIAQFSASNQESGGGRLGIYSMDK---EKLIDTI-GPP 302 (433)
T ss_dssp EEEETTTTEEEEEC---CCCSEE--EEEEECT-----TSSEEEEEEEESCTTCSCCEEEEEEETTT---TEEEEEE-EEE
T ss_pred EEEECCCCcEEEEe---cCCCCc--eEEEEcC-----CCCEEEEEECCCCccccCCCeEEEEECCC---CcEEeec-cCC
Confidence 99999888665532 222332 3338999 788888887 588999999998 7766655 456
Q ss_pred cCEEEEEEecCCC-EEEEEeCCCcEEEeeCCCCC
Q psy3599 190 CPVLGVSFNYDES-LLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 190 ~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~ 222 (223)
..+.+++|+|++. ++++++.|+.|++||+++++
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 6889999999987 55677899999999998653
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.43 E-value=1.5e-11 Score=100.78 Aligned_cols=143 Identities=13% Similarity=0.082 Sum_probs=103.8
Q ss_pred ccCCcEEEEEECCCCceeeee--------------------eeeecCCCCeeEEEEeecccccCCCCeEEE-EEeCCCeE
Q psy3599 57 RSTGVIVSILCDDLGRLSKGK--------------------RLVLSQDCPITCLSWRSWISREARDPTLLV-NIAANAVC 115 (223)
Q Consensus 57 ~~~~~i~~~~~~~~~~~~~~~--------------------~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~-~~~~~~~~ 115 (223)
++.+.+..+.|+|+|+.+... .+..+ ...+.+++|+ |+|..|+ +++.++-.
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~~~~~~~~~s-------pdg~~la~~~~~~g~~ 247 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-PRHNGAPAFS-------PDGSKLAFALSKTGSL 247 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-SSCEEEEEEC-------TTSSEEEEEECTTSSC
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-CCcccCEEEc-------CCCCEEEEEEecCCCc
Confidence 567789999999988765332 12223 5678899999 9999877 66554422
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecC-CC--cEEEEEcccCcccccceeecccccC
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSE-DS--CVYFLDIQSKEHKNAVNKLQGHACP 191 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~-dg--~v~iwd~~~~~~~~~~~~~~~h~~~ 191 (223)
.+.+||+.++... .+ ..|... +.. .|+| ++..|+.++. ++ .|++||+.+ ++ ...+..|...
T Consensus 248 ~i~~~d~~~~~~~--~l-~~~~~~---~~~~~~sp-----dg~~l~~~s~~~g~~~i~~~d~~~---~~-~~~l~~~~~~ 312 (415)
T 2hqs_A 248 NLYVMDLASGQIR--QV-TDGRSN---NTEPTWFP-----DSQNLAFTSDQAGRPQVYKVNING---GA-PQRITWEGSQ 312 (415)
T ss_dssp EEEEEETTTCCEE--EC-CCCSSC---EEEEEECT-----TSSEEEEEECTTSSCEEEEEETTS---SC-CEECCCSSSE
T ss_pred eEEEEECCCCCEE--eC-cCCCCc---ccceEECC-----CCCEEEEEECCCCCcEEEEEECCC---CC-EEEEecCCCc
Confidence 6888999877543 22 366655 555 8999 7888887776 45 677778887 55 3445556678
Q ss_pred EEEEEEecCCCEEEEEeCC---CcEEEeeCCCCC
Q psy3599 192 VLGVSFNYDESLLATSDYQ---GLIILWSREKHE 222 (223)
Q Consensus 192 v~~v~~~~~~~~l~s~s~d---~~i~iwd~~~~~ 222 (223)
+.+++|+|+|.+|++++.+ ..|++||+.+++
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 8999999999999888764 589999998764
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.40 E-value=4e-11 Score=98.18 Aligned_cols=122 Identities=14% Similarity=0.178 Sum_probs=92.9
Q ss_pred eeeecCCCCeeEEEEeecccccCCCCeEEEEEeCC-CeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCC
Q psy3599 78 RLVLSQDCPITCLSWRSWISREARDPTLLVNIAAN-AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFRE 155 (223)
Q Consensus 78 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~ 155 (223)
.+..| ...+.+++|+ |+|..|++++.+ +-..+.+||+.++.... + ..|... +.+ .|+| +
T Consensus 173 ~l~~~-~~~v~~~~~S-------pdg~~la~~s~~~~~~~i~~~d~~tg~~~~--l-~~~~~~---~~~~~~sp-----d 233 (415)
T 2hqs_A 173 VVHRS-PQPLMSPAWS-------PDGSKLAYVTFESGRSALVIQTLANGAVRQ--V-ASFPRH---NGAPAFSP-----D 233 (415)
T ss_dssp EEEEE-SSCEEEEEEC-------TTSSEEEEEECTTSSCEEEEEETTTCCEEE--E-ECCSSC---EEEEEECT-----T
T ss_pred EEeCC-CCcceeeEEc-------CCCCEEEEEEecCCCcEEEEEECCCCcEEE--e-ecCCCc---ccCEEEcC-----C
Confidence 44556 7899999999 999999988754 12278999998886543 2 366655 555 8999 7
Q ss_pred CcEEE-EecCCCc--EEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeC-CC--cEEEeeCCCCC
Q psy3599 156 GACVV-TGSEDSC--VYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDY-QG--LIILWSREKHE 222 (223)
Q Consensus 156 ~~~l~-sgs~dg~--v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~--~i~iwd~~~~~ 222 (223)
+..|+ +++.++. |++||+.+ +++ ..+..|...+.+++|+|+|..|++++. ++ .|.+||+.+++
T Consensus 234 g~~la~~~~~~g~~~i~~~d~~~---~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 234 GSKLAFALSKTGSLNLYVMDLAS---GQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTT---CCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred CCEEEEEEecCCCceEEEEECCC---CCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 88666 7777665 99999988 654 566778888999999999999988876 44 67778987654
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.27 E-value=1.4e-10 Score=89.14 Aligned_cols=117 Identities=9% Similarity=0.160 Sum_probs=84.9
Q ss_pred CCCeeEEEEeecccccCCCCeEEE-EEeCCCeEEEEEecC--CCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLV-NIAANAVCILKVLDK--EGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~v~i~d~--~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l 159 (223)
...+..++|+ +++.+|+ +++.++ .+++|+. .++... .+ ..+... +.. .|+| ++..+
T Consensus 128 ~~~~~~~~~s-------pdg~~l~~~~~~~~--~~~l~~~~~~~~~~~--~~-~~~~~~---~~~~~~s~-----dg~~l 187 (297)
T 2ojh_A 128 NLPSYWHGWS-------PDGKSFTYCGIRDQ--VFDIYSMDIDSGVET--RL-THGEGR---NDGPDYSP-----DGRWI 187 (297)
T ss_dssp SSSEEEEEEC-------TTSSEEEEEEEETT--EEEEEEEETTTCCEE--EC-CCSSSC---EEEEEECT-----TSSEE
T ss_pred CCCccceEEC-------CCCCEEEEEECCCC--ceEEEEEECCCCcce--Ec-ccCCCc---cccceECC-----CCCEE
Confidence 3458889999 8998777 666667 5677774 444332 22 255544 454 8999 68876
Q ss_pred EEec-CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCC-----------CcEEEeeCCCCC
Q psy3599 160 VTGS-EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQ-----------GLIILWSREKHE 222 (223)
Q Consensus 160 ~sgs-~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----------~~i~iwd~~~~~ 222 (223)
+.++ .++.+.+|++... ...+..+..|...+.++.|+|++..|++++.+ +.|.+||+.+++
T Consensus 188 ~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVD--GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp EEEECTTSSCEEEEEETT--SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred EEEecCCCCccEEEECCC--CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 6555 5899999998731 45567777788889999999999999888765 569999998764
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.20 E-value=9e-10 Score=86.65 Aligned_cols=139 Identities=14% Similarity=0.023 Sum_probs=95.9
Q ss_pred cCCcEEEEEECCCCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeCC-CeEEEEEecCC--CceEE-eeeee
Q psy3599 58 STGVIVSILCDDLGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAAN-AVCILKVLDKE--GAVQL-KRKFN 133 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~d~~--~~~~~-~~~~~ 133 (223)
.++.|..+..+.++.+..... ..+ ...+.+++|+ +++.+|++++.+ + .+.+|++. ++... ...+.
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~s-------pdg~~l~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQV-VDV-PGQVQPMVVS-------PDKRYLYVGVRPEF--RVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEE-EEC-SSCCCCEEEC-------TTSSEEEEEETTTT--EEEEEEECTTTCCEEEEEEEE
T ss_pred CCCeEEEEEECCCCcEEEeee-Eec-CCCCceEEEC-------CCCCEEEEeecCCC--eEEEEEecCCCCceeeccccc
Confidence 467888877776565433222 223 6788999999 999988877754 6 78888876 44322 12222
Q ss_pred ccccCcceeEEEeeecCcccCCCcEEEEec-CCCcEEEEEc---ccCcccccceeecccccCEEEEEEecCCCEEEEEe-
Q psy3599 134 VNHKSSKYQVRSTFCPIMSFREGACVVTGS-EDSCVYFLDI---QSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSD- 208 (223)
Q Consensus 134 ~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs-~dg~v~iwd~---~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s- 208 (223)
.+. .+ ...+|+| ++..+++++ .++.|++||+ .. .+.+..+..+ ..+.+++|+|++..+++++
T Consensus 82 -~~~-~~--~~~~~s~-----dg~~l~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~ 148 (343)
T 1ri6_A 82 -LPG-SL--THISTDH-----QGQFVFVGSYNAGNVSVTRLEDGLP---VGVVDVVEGL-DGCHSANISPDNRTLWVPAL 148 (343)
T ss_dssp -CSS-CC--SEEEECT-----TSSEEEEEETTTTEEEEEEEETTEE---EEEEEEECCC-TTBCCCEECTTSSEEEEEEG
T ss_pred -cCC-CC--cEEEEcC-----CCCEEEEEecCCCeEEEEECCCCcc---ccccccccCC-CCceEEEECCCCCEEEEecC
Confidence 222 32 3447999 687665554 5889999999 44 4555666544 3588899999999887777
Q ss_pred CCCcEEEeeCCC
Q psy3599 209 YQGLIILWSREK 220 (223)
Q Consensus 209 ~d~~i~iwd~~~ 220 (223)
.++.|++||+.+
T Consensus 149 ~~~~v~~~d~~~ 160 (343)
T 1ri6_A 149 KQDRICLFTVSD 160 (343)
T ss_dssp GGTEEEEEEECT
T ss_pred CCCEEEEEEecC
Confidence 899999999976
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.12 E-value=1.1e-09 Score=95.56 Aligned_cols=120 Identities=8% Similarity=0.016 Sum_probs=90.2
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeC-CC---eEEEEEecCCCceEEeeeeeccccCcc-------------------
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAA-NA---VCILKVLDKEGAVQLKRKFNVNHKSSK------------------- 140 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~-~~---~~~v~i~d~~~~~~~~~~~~~~h~~~~------------------- 140 (223)
...+.+++|+ |||++|++++. ++ ...+.+||..++...... . .+....
T Consensus 36 ~~~~~~~~~S-------pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (741)
T 2ecf_A 36 GPTLMKPKVA-------PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLV-D-SKVVLPGTETLSDEEKARRERQRIA 106 (741)
T ss_dssp CCCCEEEEEC-------TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEE-C-GGGTC--------------------
T ss_pred CCCCCCceEe-------cCCCEEEEEeccCCCCcccEEEEEECCCCceeEcc-c-hhhcccccccccchhhhhhhhhhhc
Confidence 5579999999 99999998875 44 336889999887654322 1 221110
Q ss_pred --eeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccc--cceeecccccCEEEEEEecCCCEEEEEeCCCcEEE
Q psy3599 141 --YQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKN--AVNKLQGHACPVLGVSFNYDESLLATSDYQGLIIL 215 (223)
Q Consensus 141 --~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i 215 (223)
..+.. .|+| +++.|++++. +.|++||+.+ +. .+..+..|...+.+++|+|||+.|++++ ++.|++
T Consensus 107 ~~~~v~~~~~Sp-----Dg~~l~~~~~-~~i~~~d~~~---~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~ 176 (741)
T 2ecf_A 107 AMTGIVDYQWSP-----DAQRLLFPLG-GELYLYDLKQ---EGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWV 176 (741)
T ss_dssp CCEESCCCEECT-----TSSEEEEEET-TEEEEEESSS---CSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEE
T ss_pred cccCcceeEECC-----CCCEEEEEeC-CcEEEEECCC---CCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEE
Confidence 01334 7999 8999998886 8999999998 62 3556667888899999999999999987 568999
Q ss_pred eeCCCCC
Q psy3599 216 WSREKHE 222 (223)
Q Consensus 216 wd~~~~~ 222 (223)
||+.+++
T Consensus 177 ~d~~~g~ 183 (741)
T 2ecf_A 177 IDLASGR 183 (741)
T ss_dssp EETTTTE
T ss_pred EecCCCC
Confidence 9997653
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.12 E-value=4e-10 Score=97.98 Aligned_cols=105 Identities=10% Similarity=0.023 Sum_probs=75.3
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCC---------CeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCC
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAAN---------AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFRE 155 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~---------~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~ 155 (223)
.|.+++|+ |||++|++++.+ . .+.+||..++.........+|... +.. .|+| +
T Consensus 62 ~v~~~~~S-------pDg~~l~~~~~~~~~~~~~~~~--~i~~~d~~~~~~~~l~~~~~~~~~---~~~~~~SP-----d 124 (723)
T 1xfd_A 62 RAIRYEIS-------PDREYALFSYNVEPIYQHSYTG--YYVLSKIPHGDPQSLDPPEVSNAK---LQYAGWGP-----K 124 (723)
T ss_dssp TCSEEEEC-------TTSSEEEEEESCCCCSSSCCCS--EEEEEESSSCCCEECCCTTCCSCC---CSBCCBCS-----S
T ss_pred ccceEEEC-------CCCCEEEEEecCccceeeccee--eEEEEECCCCceEeccCCcccccc---ccccEECC-----C
Confidence 48999999 999999988753 4 678999988754211100133333 333 7999 7
Q ss_pred CcEEEEecCCCcEEEEEcccCcccccceeecccccCE------------------EEEEEecCCCEEEEEeCCC
Q psy3599 156 GACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPV------------------LGVSFNYDESLLATSDYQG 211 (223)
Q Consensus 156 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v------------------~~v~~~~~~~~l~s~s~d~ 211 (223)
++.|+.++. +.|++||+.+ ++.......+...+ .++.|+|||+.|++++.|+
T Consensus 125 G~~la~~~~-~~i~~~~~~~---g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 125 GQQLIFIFE-NNIYYCAHVG---KQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp TTCEEEEET-TEEEEESSSS---SCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred CCEEEEEEC-CeEEEEECCC---CceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 999988876 7899999988 66655544433333 7899999999999987553
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.12 E-value=1.5e-08 Score=80.31 Aligned_cols=123 Identities=7% Similarity=0.037 Sum_probs=79.4
Q ss_pred CCeeEEEEeecccccCCCCeEEEE-EeCCCeEEEEEecCCC--ceEE-eeeeeccccC----cceeEEEeeecCcccCCC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVN-IAANAVCILKVLDKEG--AVQL-KRKFNVNHKS----SKYQVRSTFCPIMSFREG 156 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~d~~~--~~~~-~~~~~~~h~~----~~~~i~~~~s~~~~~~~~ 156 (223)
..+..++|+ |+|++|++ +..++ .+.+|+... +... ...+. .... .......+|+| ++
T Consensus 187 ~~p~~~~~s-------pdg~~l~v~~~~~~--~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~sp-----dG 251 (347)
T 3hfq_A 187 FGPRHLVFS-------PDGQYAFLAGELSS--QIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAIRLSH-----DG 251 (347)
T ss_dssp CCEEEEEEC-------TTSSEEEEEETTTT--EEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEEEECT-----TS
T ss_pred CCCceEEEC-------CCCCEEEEEeCCCC--EEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeEEECC-----CC
Confidence 356778999 89986555 45666 677887663 4321 11111 1111 01113337999 78
Q ss_pred cEE-EEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeC-CCcEEEe--eCCCCC
Q psy3599 157 ACV-VTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDY-QGLIILW--SREKHE 222 (223)
Q Consensus 157 ~~l-~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iw--d~~~~~ 222 (223)
++| ++...++.|.+|++...+..+.+..+..+...+..++|+|++.+|++++. ++.|.+| |..+++
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 866 56667899999999741113455566666667889999999998888775 4899999 555554
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.11 E-value=9.6e-09 Score=80.71 Aligned_cols=120 Identities=8% Similarity=0.088 Sum_probs=77.7
Q ss_pred CCCeeEEEEeecccccCCCCeEEEE-EeCCCeEEEEEecCCC--ceE--Eee--eeeccccCcceeEEEeeecCcccCCC
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVN-IAANAVCILKVLDKEG--AVQ--LKR--KFNVNHKSSKYQVRSTFCPIMSFREG 156 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~d~~~--~~~--~~~--~~~~~h~~~~~~i~~~~s~~~~~~~~ 156 (223)
...+..+.|+ +++.+|+. +..++ .+.+|+... +.. ... .+..++..........|+| ++
T Consensus 177 ~~~~~~~~~~-------pdg~~l~~~~~~~~--~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~-----dg 242 (343)
T 1ri6_A 177 GAGPRHMVFH-------PNEQYAYCVNELNS--SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-----DG 242 (343)
T ss_dssp TCCEEEEEEC-------TTSSEEEEEETTTT--EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-----TS
T ss_pred CCCcceEEEC-------CCCCEEEEEeCCCC--EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC-----CC
Confidence 4577889999 88886654 44677 788999853 321 111 1111222121112347999 67
Q ss_pred cEEE-EecCCCcEEEEEcccC-cccccceeecccccCEEEEEEecCCCEEEEEe-CCCcEEEeeC
Q psy3599 157 ACVV-TGSEDSCVYFLDIQSK-EHKNAVNKLQGHACPVLGVSFNYDESLLATSD-YQGLIILWSR 218 (223)
Q Consensus 157 ~~l~-sgs~dg~v~iwd~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~ 218 (223)
.+++ ++..++.|.+||+... ...+.+..+..+.. +.+++|+|+++.|++++ .++.+.+|++
T Consensus 243 ~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 243 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred CEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 6665 6668999999999820 01344555554444 88999999999888777 6899999954
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.10 E-value=1.4e-09 Score=94.78 Aligned_cols=100 Identities=15% Similarity=0.188 Sum_probs=75.1
Q ss_pred eeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCc---eEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEe
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGA---VQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTG 162 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~---~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sg 162 (223)
+.+++|+ |||++|++++. + .+.+||..++ ... . + ..|... +.. .|+| +++.|+.+
T Consensus 111 v~~~~~S-------pDg~~l~~~~~-~--~i~~~d~~~~~~~~~~-~-l-~~~~~~---~~~~~~SP-----DG~~la~~ 169 (741)
T 2ecf_A 111 IVDYQWS-------PDAQRLLFPLG-G--ELYLYDLKQEGKAAVR-Q-L-THGEGF---ATDAKLSP-----KGGFVSFI 169 (741)
T ss_dssp SCCCEEC-------TTSSEEEEEET-T--EEEEEESSSCSTTSCC-B-C-CCSSSC---EEEEEECT-----TSSEEEEE
T ss_pred cceeEEC-------CCCCEEEEEeC-C--cEEEEECCCCCcceEE-E-c-ccCCcc---cccccCCC-----CCCEEEEE
Confidence 7899999 99999998887 5 6889999877 332 2 2 355555 454 8999 89999988
Q ss_pred cCCCcEEEEEcccCcccccceeecccccC----------------EEEEEEecCCCEEEEEeCCC
Q psy3599 163 SEDSCVYFLDIQSKEHKNAVNKLQGHACP----------------VLGVSFNYDESLLATSDYQG 211 (223)
Q Consensus 163 s~dg~v~iwd~~~~~~~~~~~~~~~h~~~----------------v~~v~~~~~~~~l~s~s~d~ 211 (223)
+. +.|++||+.+ ++.......+... +.++.|+|||..|++++.|+
T Consensus 170 ~~-~~i~~~d~~~---g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 170 RG-RNLWVIDLAS---GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp ET-TEEEEEETTT---TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred eC-CcEEEEecCC---CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 74 5899999988 6654444433332 47799999999999988765
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.09 E-value=6.5e-10 Score=100.83 Aligned_cols=138 Identities=9% Similarity=-0.009 Sum_probs=100.4
Q ss_pred CcEEEEEEC-CCCceeeee----------------eeeecCCC-CeeEEEEeecccccCCCCeEEEEEeCCCeEEEE-Ee
Q psy3599 60 GVIVSILCD-DLGRLSKGK----------------RLVLSQDC-PITCLSWRSWISREARDPTLLVNIAANAVCILK-VL 120 (223)
Q Consensus 60 ~~i~~~~~~-~~~~~~~~~----------------~~~~~~~~-~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~-i~ 120 (223)
+.+..+.|+ |+|+.+... .+..+ .. .+..+.|+ ++..|+.++++. .+. +|
T Consensus 296 ~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~s--------dg~~l~~~s~~~--~l~~~~ 364 (1045)
T 1k32_A 296 PSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEP-LRIRYVRRGGD--------TKVAFIHGTREG--DFLGIY 364 (1045)
T ss_dssp GGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCC-SCEEEEEECSS--------SEEEEEEEETTE--EEEEEE
T ss_pred cccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCC-CcceEEeeeEc--------CCCeEEEEECCC--ceEEEE
Confidence 356778888 887754322 11112 22 45555553 677888877755 555 88
Q ss_pred cCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEec
Q psy3599 121 DKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNY 199 (223)
Q Consensus 121 d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~ 199 (223)
+..++.... + .+|... +.. .|+| ++..|++++.++.|++||+.+ ++....+.+|...+.+++|+|
T Consensus 365 d~~~~~~~~--l-~~~~~~---~~~~~~Sp-----DG~~la~~~~~~~v~~~d~~t---g~~~~~~~~~~~~v~~~~~Sp 430 (1045)
T 1k32_A 365 DYRTGKAEK--F-EENLGN---VFAMGVDR-----NGKFAVVANDRFEIMTVDLET---GKPTVIERSREAMITDFTISD 430 (1045)
T ss_dssp ETTTCCEEE--C-CCCCCS---EEEEEECT-----TSSEEEEEETTSEEEEEETTT---CCEEEEEECSSSCCCCEEECT
T ss_pred ECCCCCceE--e-cCCccc---eeeeEECC-----CCCEEEEECCCCeEEEEECCC---CceEEeccCCCCCccceEECC
Confidence 988765332 2 255555 444 8999 899999999999999999998 777777768888899999999
Q ss_pred CCCEEEEEeCCC----------cEEEeeCCCCC
Q psy3599 200 DESLLATSDYQG----------LIILWSREKHE 222 (223)
Q Consensus 200 ~~~~l~s~s~d~----------~i~iwd~~~~~ 222 (223)
+|..|++++.++ .|++||+.+++
T Consensus 431 DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 999998887654 89999997653
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.08 E-value=1.3e-09 Score=92.24 Aligned_cols=106 Identities=10% Similarity=0.132 Sum_probs=86.7
Q ss_pred CCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEc--ccCcc
Q psy3599 101 RDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDI--QSKEH 178 (223)
Q Consensus 101 ~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~--~~~~~ 178 (223)
+++.++++++.++ .+.+||..+++.+... ..++. + -...|+| ++.++++++.|+.|++||+ .+
T Consensus 147 p~~~~~vs~~~d~--~V~v~D~~t~~~~~~i-~~g~~--~--~~v~~sp-----dg~~l~v~~~d~~V~v~D~~~~t--- 211 (543)
T 1nir_A 147 LPNLFSVTLRDAG--QIALVDGDSKKIVKVI-DTGYA--V--HISRMSA-----SGRYLLVIGRDARIDMIDLWAKE--- 211 (543)
T ss_dssp GGGEEEEEEGGGT--EEEEEETTTCCEEEEE-ECSTT--E--EEEEECT-----TSCEEEEEETTSEEEEEETTSSS---
T ss_pred CCCEEEEEEcCCC--eEEEEECCCceEEEEE-ecCcc--c--ceEEECC-----CCCEEEEECCCCeEEEEECcCCC---
Confidence 7889999999888 8999999998776543 22443 2 2237999 8999999999999999999 77
Q ss_pred cccceeecccccCEEEEEEec----CCCEEEEEe-CCCcEEEeeCCCCC
Q psy3599 179 KNAVNKLQGHACPVLGVSFNY----DESLLATSD-YQGLIILWSREKHE 222 (223)
Q Consensus 179 ~~~~~~~~~h~~~v~~v~~~~----~~~~l~s~s-~d~~i~iwd~~~~~ 222 (223)
++++..+.. ...+..++|+| +|.++++++ .+++|.+||..+++
T Consensus 212 ~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 212 PTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp CEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred CcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 778888874 44579999999 999999888 48999999988765
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.08 E-value=6e-09 Score=79.83 Aligned_cols=133 Identities=12% Similarity=0.075 Sum_probs=88.3
Q ss_pred CCcEEEEEECC-CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCC-ceEEeeeeeccc
Q psy3599 59 TGVIVSILCDD-LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEG-AVQLKRKFNVNH 136 (223)
Q Consensus 59 ~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~-~~~~~~~~~~~h 136 (223)
++.|.. |+. +++.. .+..+ ...|.+++|+ |++.+|+++++ + .+.+||..+ +.... .. .++
T Consensus 21 ~~~i~~--~d~~~~~~~---~~~~~-~~~v~~~~~s-------pdg~~l~~~~~-~--~i~~~d~~~~~~~~~-~~-~~~ 82 (297)
T 2ojh_A 21 RSSIEI--FNIRTRKMR---VVWQT-PELFEAPNWS-------PDGKYLLLNSE-G--LLYRLSLAGDPSPEK-VD-TGF 82 (297)
T ss_dssp CEEEEE--EETTTTEEE---EEEEE-SSCCEEEEEC-------TTSSEEEEEET-T--EEEEEESSSCCSCEE-CC-CTT
T ss_pred ceeEEE--EeCCCCcee---eeccC-CcceEeeEEC-------CCCCEEEEEcC-C--eEEEEeCCCCCCceE-ec-ccc
Confidence 455553 444 34433 23345 7889999999 99999999875 4 588899887 64433 22 244
Q ss_pred cCcceeEEE-eeecCcccCCCcEEEEec--CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEE-EEeCCCc
Q psy3599 137 KSSKYQVRS-TFCPIMSFREGACVVTGS--EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLA-TSDYQGL 212 (223)
Q Consensus 137 ~~~~~~i~~-~~s~~~~~~~~~~l~sgs--~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~ 212 (223)
.... +.+ .|+| ++..+++++ .++...+|.+.... ++ ...+..+. .+..++|+|++..|+ +++.++.
T Consensus 83 ~~~~--~~~~~~sp-----dg~~l~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~ 152 (297)
T 2ojh_A 83 ATIC--NNDHGISP-----DGALYAISDKVEFGKSAIYLLPSTG-GT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQV 152 (297)
T ss_dssp CCCB--CSCCEECT-----TSSEEEEEECTTTSSCEEEEEETTC-CC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTE
T ss_pred cccc--ccceEECC-----CCCEEEEEEeCCCCcceEEEEECCC-Cc-eEEeecCC-CccceEECCCCCEEEEEECCCCc
Confidence 3222 444 7999 799999988 34556666554310 33 34444333 489999999999877 7778999
Q ss_pred EEEeeCC
Q psy3599 213 IILWSRE 219 (223)
Q Consensus 213 i~iwd~~ 219 (223)
++||++.
T Consensus 153 ~~l~~~~ 159 (297)
T 2ojh_A 153 FDIYSMD 159 (297)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999853
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.07 E-value=8.4e-09 Score=81.54 Aligned_cols=121 Identities=13% Similarity=0.124 Sum_probs=87.9
Q ss_pred CCCeeEEEEeecccccCCCCeEEE-EEeCCCeEEEEEecCCCceEEeeeeeccccCc-----ceeEE-EeeecCcccCCC
Q psy3599 84 DCPITCLSWRSWISREARDPTLLV-NIAANAVCILKVLDKEGAVQLKRKFNVNHKSS-----KYQVR-STFCPIMSFREG 156 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~-----~~~i~-~~~s~~~~~~~~ 156 (223)
...+..+.|+ +++.+++ +...++ .+.+||..+++.+... ..+.... ..... ..|+| ++
T Consensus 88 ~~~~~~~~~s-------~dg~~l~v~~~~~~--~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~-----dg 152 (353)
T 3vgz_A 88 DLKPFGATIN-------NTTQTLWFGNTVNS--AVTAIDAKTGEVKGRL-VLDDRKRTEEVRPLQPRELVADD-----AT 152 (353)
T ss_dssp SSCCCSEEEE-------TTTTEEEEEETTTT--EEEEEETTTCCEEEEE-ESCCCCCCSSCCCCEEEEEEEET-----TT
T ss_pred CCCcceEEEC-------CCCCEEEEEecCCC--EEEEEeCCCCeeEEEE-ecCCCccccccCCCCCceEEECC-----CC
Confidence 3457789999 8887554 555667 7899999888765532 2121111 00123 37999 67
Q ss_pred cEEEEec--CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 157 ACVVTGS--EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 157 ~~l~sgs--~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+.++.++ .++.|.+||..+ ++.+..+..+...+.++.|+|++..+++++.++.+.+||+.+++
T Consensus 153 ~~l~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 153 NTVYISGIGKESVIWVVDGGN---IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK 217 (353)
T ss_dssp TEEEEEEESSSCEEEEEETTT---TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE
T ss_pred CEEEEEecCCCceEEEEcCCC---CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe
Confidence 7666555 578899999998 88777777555667889999999999999999999999998754
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.06 E-value=2.3e-09 Score=93.09 Aligned_cols=118 Identities=10% Similarity=0.128 Sum_probs=85.4
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCC-----ceEEeeeeeccccCcc-----------eeEEE-e
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEG-----AVQLKRKFNVNHKSSK-----------YQVRS-T 146 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~-----~~~~~~~~~~~h~~~~-----------~~i~~-~ 146 (223)
...+.+++|+ |||+.|+.+.+ + .+.+|++.+ +...... ..+.... ..+.. .
T Consensus 120 ~~~~~~~~~S-------pdG~~la~~~~-~--~i~v~~~~~~~~~~g~~~~~~--~~~~~~~~~g~~~~~ee~~~~~~~~ 187 (706)
T 2z3z_A 120 NEETASLDFS-------PVGDRVAYVRN-H--NLYIARGGKLGEGMSRAIAVT--IDGTETLVYGQAVHQREFGIEKGTF 187 (706)
T ss_dssp TTCCTTCEEC-------TTSSEEEEEET-T--EEEEEECBCTTSCCCCCEESC--SCCBTTEEESSCCGGGCTTCCCSEE
T ss_pred cccccCCcCC-------CCCCEEEEEEC-C--eEEEEecCcccccCCCcEEec--cCCCCCeEcccchhhhhcCCCceEE
Confidence 5678889999 99999998654 5 688999887 6543321 1222210 00133 6
Q ss_pred eecCcccCCCcEEEEec---------------------------------CCCcEEEEEcccCcccccceee--cccccC
Q psy3599 147 FCPIMSFREGACVVTGS---------------------------------EDSCVYFLDIQSKEHKNAVNKL--QGHACP 191 (223)
Q Consensus 147 ~s~~~~~~~~~~l~sgs---------------------------------~dg~v~iwd~~~~~~~~~~~~~--~~h~~~ 191 (223)
|+| +++.|++++ .+..|++||+.+ ++..... ..|...
T Consensus 188 ~Sp-----Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~---~~~~~~~~~~~~~~~ 259 (706)
T 2z3z_A 188 WSP-----KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLAT---GKTVYLQTGEPKEKF 259 (706)
T ss_dssp ECT-----TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTT---TEEEECCCCSCTTCE
T ss_pred ECC-----CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCC---CceEeeccCCCCcee
Confidence 999 899999887 446799999988 6543332 246677
Q ss_pred EEEEEEecCCCEEEEEeCCC-----cEEEeeCCCC
Q psy3599 192 VLGVSFNYDESLLATSDYQG-----LIILWSREKH 221 (223)
Q Consensus 192 v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~ 221 (223)
+.+++|+|+|..|++++.++ .|++||+.++
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 99999999999999988775 8999999876
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.05 E-value=3e-08 Score=78.34 Aligned_cols=115 Identities=10% Similarity=0.058 Sum_probs=86.2
Q ss_pred eeEEEEeecccccCCCCeEEEEEe--CCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIA--ANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~--~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
+.++.|+ +++.++++++ .++ .+.+||..++..+... . .+...+ ....|+| ++..++.++.
T Consensus 143 ~~~~~~s-------~dg~~l~~~~~~~~~--~i~~~d~~~~~~~~~~-~-~~~~~~--~~~~~s~-----dg~~l~~~~~ 204 (353)
T 3vgz_A 143 PRELVAD-------DATNTVYISGIGKES--VIWVVDGGNIKLKTAI-Q-NTGKMS--TGLALDS-----EGKRLYTTNA 204 (353)
T ss_dssp EEEEEEE-------TTTTEEEEEEESSSC--EEEEEETTTTEEEEEE-C-CCCTTC--CCCEEET-----TTTEEEEECT
T ss_pred CceEEEC-------CCCCEEEEEecCCCc--eEEEEcCCCCceEEEe-c-CCCCcc--ceEEECC-----CCCEEEEEcC
Confidence 6889999 8888766555 466 7889999988766542 1 233332 2236899 7898999999
Q ss_pred CCcEEEEEcccCcccccceeecc----cccCEEEEEEecCCCEEEEEeC-CCcEEEeeCCCCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKLQG----HACPVLGVSFNYDESLLATSDY-QGLIILWSREKHE 222 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~~~ 222 (223)
++.+.+||..+ ++.+..+.. +...+..++|+|++..++.++. ++.|.+||+.+++
T Consensus 205 ~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 205 DGELITIDTAD---NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp TSEEEEEETTT---TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred CCeEEEEECCC---CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 99999999998 777666543 4556889999999997666654 5999999998765
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.04 E-value=1.6e-08 Score=80.06 Aligned_cols=142 Identities=9% Similarity=0.022 Sum_probs=92.5
Q ss_pred CCcEEEEEECC-CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeC--CCeEEEEEecCCCceEE-eeeeec
Q psy3599 59 TGVIVSILCDD-LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAA--NAVCILKVLDKEGAVQL-KRKFNV 134 (223)
Q Consensus 59 ~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~d~~~~~~~-~~~~~~ 134 (223)
.+.|..+.+++ +|++..... ..+ ...+..++|+ |++++++++.. ++ .+.+|++.++... ...+ .
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~-~~~-~~~p~~~a~s-------pdg~l~~~~~~~~~~--~v~~~~~~~g~~~~~~~~-~ 82 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGL-LAA-TQNPTYLALS-------AKDCLYSVDKEDDEG--GIAAWQIDGQTAHKLNTV-V 82 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEE-EEE-CSCCCCEEEC-------TTCEEEEEEEETTEE--EEEEEEEETTEEEEEEEE-E
T ss_pred CCCEEEEEEcCCCCeEEEeee-eec-cCCcceEEEc-------cCCeEEEEEecCCCc--eEEEEEecCCcEEEeeee-e
Confidence 45688888888 566544322 233 5667889999 89994444432 34 7888988766421 1111 1
Q ss_pred cccCcceeEEEeeecCcccCCCcEEEEec-CCCcEEEEEcccCcccccceeecc---------cccCEEEEEEecCCCEE
Q psy3599 135 NHKSSKYQVRSTFCPIMSFREGACVVTGS-EDSCVYFLDIQSKEHKNAVNKLQG---------HACPVLGVSFNYDESLL 204 (223)
Q Consensus 135 ~h~~~~~~i~~~~s~~~~~~~~~~l~sgs-~dg~v~iwd~~~~~~~~~~~~~~~---------h~~~v~~v~~~~~~~~l 204 (223)
.+...+ ...+|+| ++.+|++++ .++.+.+|++...+....+..+.. +...+.+++|+|++.++
T Consensus 83 ~~~~~p--~~~a~sp-----dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~ 155 (347)
T 3hfq_A 83 APGTPP--AYVAVDE-----ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLA 155 (347)
T ss_dssp EESCCC--SEEEEET-----TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEE
T ss_pred cCCCCC--EEEEECC-----CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEE
Confidence 344443 3447999 788777776 789999999963111233333321 12248899999999977
Q ss_pred EEEeCCCcEEEeeCC
Q psy3599 205 ATSDYQGLIILWSRE 219 (223)
Q Consensus 205 ~s~s~d~~i~iwd~~ 219 (223)
++...++.|.+||+.
T Consensus 156 v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEEC
Confidence 777778899999987
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.04 E-value=1.1e-09 Score=93.21 Aligned_cols=109 Identities=10% Similarity=-0.004 Sum_probs=86.3
Q ss_pred eEEEEeecccccCCCCeEEEEEeCC--CeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecC
Q psy3599 88 TCLSWRSWISREARDPTLLVNIAAN--AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 88 ~~l~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~ 164 (223)
.++.|+ |||++|++++.+ ....+.+||+.++... .+ .+|... +.. .|+| |++.|+++..
T Consensus 153 ~~~~~s-------pDG~~la~~~~~~~~~~~i~~~d~~~g~~~--~l-~~~~~~---~~~~~~Sp-----DG~~l~~~~~ 214 (582)
T 3o4h_A 153 FGFVSD-------IRGDLIAGLGFFGGGRVSLFTSNLSSGGLR--VF-DSGEGS---FSSASISP-----GMKVTAGLET 214 (582)
T ss_dssp CEEEEE-------EETTEEEEEEEEETTEEEEEEEETTTCCCE--EE-CCSSCE---EEEEEECT-----TSCEEEEEEC
T ss_pred ceEEEC-------CCCCEEEEEEEcCCCCeEEEEEcCCCCCce--Ee-ecCCCc---cccceECC-----CCCEEEEccC
Confidence 788999 999999977654 1126889998877543 22 366555 455 8999 8999998888
Q ss_pred CC--cEEEEEcccCcccccceeecccccCEEEEE--------EecCCCEEEEEeCCCcEEEeeC
Q psy3599 165 DS--CVYFLDIQSKEHKNAVNKLQGHACPVLGVS--------FNYDESLLATSDYQGLIILWSR 218 (223)
Q Consensus 165 dg--~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~--------~~~~~~~l~s~s~d~~i~iwd~ 218 (223)
++ .|++||+.+ ++.. .+.+|...+..+. |+|+|.++++++.|+.+++|++
T Consensus 215 ~~~~~i~~~d~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 215 AREARLVTVDPRD---GSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp SSCEEEEEECTTT---CCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCeeEEEEEcCCC---CcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 88 899999998 6666 6667776666667 9999998999999999999997
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.02 E-value=2.4e-09 Score=93.04 Aligned_cols=116 Identities=10% Similarity=0.119 Sum_probs=83.3
Q ss_pred eeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcc-e--------------eEEE-eeecC
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSK-Y--------------QVRS-TFCPI 150 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~-~--------------~i~~-~~s~~ 150 (223)
+..++|+ |||+.|+.++++ .+.+||..++...... ..+.... + .+.. .|+|
T Consensus 116 ~~~~~~S-------PdG~~la~~~~~---~i~~~~~~~g~~~~~~--~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp- 182 (723)
T 1xfd_A 116 LQYAGWG-------PKGQQLIFIFEN---NIYYCAHVGKQAIRVV--STGKEGVIYNGLSDWLYEEEILKTHIAHWWSP- 182 (723)
T ss_dssp CSBCCBC-------SSTTCEEEEETT---EEEEESSSSSCCEEEE--CCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-
T ss_pred ccccEEC-------CCCCEEEEEECC---eEEEEECCCCceEEEe--cCCCCCceECcccceeEEEEeccCcceEEECC-
Confidence 7789999 999999998874 5889998877544322 1222211 0 0134 7999
Q ss_pred cccCCCcEEEEecCCC----------------------------------cEEEEEcccCcccccceeeccc------cc
Q psy3599 151 MSFREGACVVTGSEDS----------------------------------CVYFLDIQSKEHKNAVNKLQGH------AC 190 (223)
Q Consensus 151 ~~~~~~~~l~sgs~dg----------------------------------~v~iwd~~~~~~~~~~~~~~~h------~~ 190 (223)
+++.|++++.|+ .|++||+.+ ++....+..+ ..
T Consensus 183 ----Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~---~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 183 ----DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG---PTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp ----TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS---SCCCEECCCCCCGGGSSE
T ss_pred ----CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC---CceeEEeeCCccCCCccc
Confidence 899998887553 799999988 6655555543 56
Q ss_pred CEEEEEEecCCCEEEEEeC----CCcEEEeeCCCCC
Q psy3599 191 PVLGVSFNYDESLLATSDY----QGLIILWSREKHE 222 (223)
Q Consensus 191 ~v~~v~~~~~~~~l~s~s~----d~~i~iwd~~~~~ 222 (223)
.+.+++|+|||..+++.+. +..|++||+.+++
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 7899999999998877653 3579999998764
No 147
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.00 E-value=2.6e-08 Score=84.30 Aligned_cols=114 Identities=9% Similarity=0.087 Sum_probs=87.4
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecC--CCceEEeeeeeccccCcceeEEEeeec----CcccCCCcEE
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANAVCILKVLDK--EGAVQLKRKFNVNHKSSKYQVRSTFCP----IMSFREGACV 159 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~--~~~~~~~~~~~~~h~~~~~~i~~~~s~----~~~~~~~~~l 159 (223)
.+..+.|+ +++++|++++.++ .+.+||+ .++..+... .+...+ ...+|+| . ++++
T Consensus 180 ~~~~v~~s-------pdg~~l~v~~~d~--~V~v~D~~~~t~~~~~~i---~~g~~p--~~va~sp~~~~d-----g~~l 240 (543)
T 1nir_A 180 AVHISRMS-------ASGRYLLVIGRDA--RIDMIDLWAKEPTKVAEI---KIGIEA--RSVESSKFKGYE-----DRYT 240 (543)
T ss_dssp TEEEEEEC-------TTSCEEEEEETTS--EEEEEETTSSSCEEEEEE---ECCSEE--EEEEECCSTTCT-----TTEE
T ss_pred ccceEEEC-------CCCCEEEEECCCC--eEEEEECcCCCCcEEEEE---ecCCCc--ceEEeCCCcCCC-----CCEE
Confidence 38899999 9999999999888 8999999 777665542 232332 3337887 5 7778
Q ss_pred EEec-CCCcEEEEEcccCcccccceeecc----------ccc-CEEEEEEecCCC-EEEEEeCCCcEEEeeCCCC
Q psy3599 160 VTGS-EDSCVYFLDIQSKEHKNAVNKLQG----------HAC-PVLGVSFNYDES-LLATSDYQGLIILWSREKH 221 (223)
Q Consensus 160 ~sgs-~dg~v~iwd~~~~~~~~~~~~~~~----------h~~-~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~ 221 (223)
++++ .++.|.+||..+ .+++..+.. |.. .+.++.++|++. ++++...++.|.+||+.+.
T Consensus 241 ~v~~~~~~~v~v~D~~t---~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 241 IAGAYWPPQFAIMDGET---LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp EEEEEESSEEEEEETTT---CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred EEEEccCCeEEEEeccc---cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 7777 489999999998 888777754 223 789999999755 5667778999999998764
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.99 E-value=8.7e-08 Score=76.34 Aligned_cols=122 Identities=7% Similarity=0.051 Sum_probs=78.7
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEe-CCCeEEEEEecCCCceEEe-eeee--ccccCcceeEEEeeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIA-ANAVCILKVLDKEGAVQLK-RKFN--VNHKSSKYQVRSTFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~d~~~~~~~~-~~~~--~~h~~~~~~i~~~~s~~~~~~~~~~l 159 (223)
...+..++|+ |+++++++++ .++ .+.+|+..++.... ..+. ..+.... ....|+| ++++|
T Consensus 210 ~~~~~~~~~s-------pdg~~l~v~~~~~~--~v~v~~~~~g~~~~~~~~~~~~~~~~~~--~~i~~sp-----dg~~l 273 (361)
T 3scy_A 210 GSGPRHLIFN-------SDGKFAYLINEIGG--TVIAFRYADGMLDEIQTVAADTVNAQGS--GDIHLSP-----DGKYL 273 (361)
T ss_dssp TCCEEEEEEC-------TTSSEEEEEETTTC--EEEEEEEETTEEEEEEEEESCSSCCCCE--EEEEECT-----TSSEE
T ss_pred CCCCeEEEEc-------CCCCEEEEEcCCCC--eEEEEEecCCceEEeEEEecCCCCCCCc--ccEEECC-----CCCEE
Confidence 3456789999 9998777665 566 78899987664311 1111 1111221 2337999 78887
Q ss_pred EEecC--CCcEEEEEcccC-cccccceeecccccCEEEEEEecCCCEEEEEe-CCCcEEEe--eCCCCC
Q psy3599 160 VTGSE--DSCVYFLDIQSK-EHKNAVNKLQGHACPVLGVSFNYDESLLATSD-YQGLIILW--SREKHE 222 (223)
Q Consensus 160 ~sgs~--dg~v~iwd~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iw--d~~~~~ 222 (223)
+.+.. ++.|.+|++... +..+.+..+.. ...+.+++|+|++++|++++ .++.|.+| |..+++
T Consensus 274 ~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 274 YASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp EEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred EEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 66555 489999999620 10223444443 44678999999999888887 67899996 444443
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.98 E-value=2.3e-08 Score=78.49 Aligned_cols=116 Identities=10% Similarity=0.085 Sum_probs=77.5
Q ss_pred CCCeeEEEEeecccccCCCCeEEE-EEeCCCeEEEEEecCCCceE---EeeeeeccccCcceeEEEeeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLV-NIAANAVCILKVLDKEGAVQ---LKRKFNVNHKSSKYQVRSTFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~v~i~d~~~~~~---~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l 159 (223)
...+..+.|+ +++++++ ++..++ .+.+||..++.. +.. + .....+ ....|+| ++.++
T Consensus 175 ~~~~~~~~~s-------pdg~~l~v~~~~~~--~v~v~d~~~~~~~~~~~~-~--~~~~~~--~~~~~sp-----dg~~l 235 (331)
T 3u4y_A 175 GTRPFNITFT-------PDGNFAFVANLIGN--SIGILETQNPENITLLNA-V--GTNNLP--GTIVVSR-----DGSTV 235 (331)
T ss_dssp SSSEEEEEEC-------TTSSEEEEEETTTT--EEEEEECSSTTSCEEEEE-E--ECSSCC--CCEEECT-----TSSEE
T ss_pred CCCccceEEC-------CCCCEEEEEeCCCC--eEEEEECCCCcccceeee-c--cCCCCC--ceEEECC-----CCCEE
Confidence 4567889999 8998554 555677 789999987765 433 2 222232 3337999 78865
Q ss_pred EE-ecCCCcEEEEEcccCccccc--ceeeccc----cc---CEEEEEEecCCCEEEEEe-CCCcEEEeeCCCC
Q psy3599 160 VT-GSEDSCVYFLDIQSKEHKNA--VNKLQGH----AC---PVLGVSFNYDESLLATSD-YQGLIILWSREKH 221 (223)
Q Consensus 160 ~s-gs~dg~v~iwd~~~~~~~~~--~~~~~~h----~~---~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~ 221 (223)
+. ...++.|.+||..+ ++. +..+..+ .. .+..++|+|++..|++++ .++.|.+||+...
T Consensus 236 ~v~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLS---GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EEECSSEEEEEEEETTT---TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EEEEcCCCEEEEEECCC---CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 54 44578899999988 554 3332211 11 235689999999876555 5679999998764
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.96 E-value=5.4e-08 Score=76.38 Aligned_cols=135 Identities=9% Similarity=0.012 Sum_probs=91.8
Q ss_pred cCCcEEEEEECC-CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEe-CCCeEEEEEecCCCceEEeeeeecc
Q psy3599 58 STGVIVSILCDD-LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIA-ANAVCILKVLDKEGAVQLKRKFNVN 135 (223)
Q Consensus 58 ~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~d~~~~~~~~~~~~~~ 135 (223)
.++.|.. ||. ++++.. .+..+ ...+ .++|+ +++.++++++ .+. .+.+||..++......+. .
T Consensus 18 ~~~~v~~--~d~~~~~~~~--~~~~~-~~~~-~~~~s-------~dg~~l~~~~~~~~--~i~~~d~~~~~~~~~~~~-~ 81 (331)
T 3u4y_A 18 HLRRISF--FSTDTLEILN--QITLG-YDFV-DTAIT-------SDCSNVVVTSDFCQ--TLVQIETQLEPPKVVAIQ-E 81 (331)
T ss_dssp GGTEEEE--EETTTCCEEE--EEECC-CCEE-EEEEC-------SSSCEEEEEESTTC--EEEEEECSSSSCEEEEEE-E
T ss_pred CCCeEEE--EeCcccceee--eEEcc-CCcc-eEEEc-------CCCCEEEEEeCCCC--eEEEEECCCCceeEEecc-c
Confidence 3456663 444 455544 23333 4556 99999 8998666555 466 788999988765222322 3
Q ss_pred ccCcceeEE-EeeecCcccCCCcEEEEecCCC---cEEEEEcccCcccccceeecccccCEEEEEEecCCCEE-EEEeCC
Q psy3599 136 HKSSKYQVR-STFCPIMSFREGACVVTGSEDS---CVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLL-ATSDYQ 210 (223)
Q Consensus 136 h~~~~~~i~-~~~s~~~~~~~~~~l~sgs~dg---~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d 210 (223)
+... .. ..|+| ++.+++++..++ .|.+||+.+ ++.+..+..+ ....+++|+|+++.+ ++...+
T Consensus 82 ~~~~---~~~~~~s~-----dg~~l~~~~~~~~~~~i~v~d~~~---~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 82 GQSS---MADVDITP-----DDQFAVTVTGLNHPFNMQSYSFLK---NKFISTIPIP-YDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp CSSC---CCCEEECT-----TSSEEEECCCSSSSCEEEEEETTT---TEEEEEEECC-TTEEEEEECTTSSCEEEEEETT
T ss_pred CCCC---ccceEECC-----CCCEEEEecCCCCcccEEEEECCC---CCeEEEEECC-CCccceEECCCCCEEEEEecCC
Confidence 3333 45 47899 788888666653 899999998 7777777644 446899999999755 455566
Q ss_pred Cc-EEEeeCCC
Q psy3599 211 GL-IILWSREK 220 (223)
Q Consensus 211 ~~-i~iwd~~~ 220 (223)
+. +.+|++..
T Consensus 150 ~~~i~~~~~~~ 160 (331)
T 3u4y_A 150 ANTVRRFKIDA 160 (331)
T ss_dssp TTEEEEEEECT
T ss_pred CceEEEEEECC
Confidence 88 99999764
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.95 E-value=1e-08 Score=93.08 Aligned_cols=114 Identities=11% Similarity=0.035 Sum_probs=92.5
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
...+..++|+ |+|.+|++++.++ .+.+||+.++.... .. .+|.... ....|+| ++.+|++++
T Consensus 378 ~~~~~~~~~S-------pDG~~la~~~~~~--~v~~~d~~tg~~~~-~~-~~~~~~v--~~~~~Sp-----DG~~la~~~ 439 (1045)
T 1k32_A 378 LGNVFAMGVD-------RNGKFAVVANDRF--EIMTVDLETGKPTV-IE-RSREAMI--TDFTISD-----NSRFIAYGF 439 (1045)
T ss_dssp CCSEEEEEEC-------TTSSEEEEEETTS--EEEEEETTTCCEEE-EE-ECSSSCC--CCEEECT-----TSCEEEEEE
T ss_pred ccceeeeEEC-------CCCCEEEEECCCC--eEEEEECCCCceEE-ec-cCCCCCc--cceEECC-----CCCeEEEEe
Confidence 5678999999 9999999999888 89999999886544 32 2666663 2237999 799888877
Q ss_pred CCC----------cEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 164 EDS----------CVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 164 ~dg----------~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
.++ .|++||+.+ ++ +..+..|...+.++.|+|+|..|++++.++..++|+..
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~---g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEG---RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTT---TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred cCccccccCCCCCeEEEEECCC---Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 654 899999998 66 66677788889999999999999999988888888754
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.94 E-value=2.6e-08 Score=79.87 Aligned_cols=142 Identities=12% Similarity=0.109 Sum_probs=92.4
Q ss_pred CcEEEEEECC-CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCC-CceEEeeeeecccc
Q psy3599 60 GVIVSILCDD-LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKE-GAVQLKRKFNVNHK 137 (223)
Q Consensus 60 ~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~-~~~~~~~~~~~~h~ 137 (223)
+.|..+.+++ +|.+.............+..++|+ +++++|++++.+ .+.+|++. ++..... ......
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~s-------pdg~~l~~~~~~---~v~~~~~~~~g~~~~~-~~~~~~ 82 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFD-------HERKNIYGAAMK---KWSSFAVKSPTEIVHE-ASHPIG 82 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEEC-------TTSSEEEEEEBT---EEEEEEEEETTEEEEE-EEEECC
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEEC-------CCCCEEEEEccc---eEEEEEECCCCCEEEe-eEeecC
Confidence 5688888887 666644332221224578899999 999988887765 57788876 5644321 110101
Q ss_pred CcceeEEEeeecCcccCCCc--EEEEec-------------CCCcEEEEEcccCcccccceeec----ccccCEEEEEEe
Q psy3599 138 SSKYQVRSTFCPIMSFREGA--CVVTGS-------------EDSCVYFLDIQSKEHKNAVNKLQ----GHACPVLGVSFN 198 (223)
Q Consensus 138 ~~~~~i~~~~s~~~~~~~~~--~l~sgs-------------~dg~v~iwd~~~~~~~~~~~~~~----~h~~~v~~v~~~ 198 (223)
+.+ ....|+| +++ ++++++ .+|.+.+|++... ++....+. .+...+.+++|+
T Consensus 83 g~~--~~~~~sp-----dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~s 153 (365)
T 1jof_A 83 GHP--RANDADT-----NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET--GKLEKNVQNYEYQENTGIHGMVFD 153 (365)
T ss_dssp SSG--GGGCTTS-----CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT--CCEEEEEEEEECCTTCCEEEEEEC
T ss_pred CCC--ccEEECC-----CCCEEEEEEecCCcceeccceeecCCceEEEEccCCC--CcCcceEeeEEeCCCCcceEEEEC
Confidence 122 2236888 788 455654 6899999999731 44333332 245578999999
Q ss_pred cCCCEEEEEe-CCCcEEEeeCC-CC
Q psy3599 199 YDESLLATSD-YQGLIILWSRE-KH 221 (223)
Q Consensus 199 ~~~~~l~s~s-~d~~i~iwd~~-~~ 221 (223)
|+|+++++++ .++.|++||+. ++
T Consensus 154 pdG~~l~~~~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 154 PTETYLYSADLTANKLWTHRKLASG 178 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTS
T ss_pred CCCCEEEEEcCCCCEEEEEEECCCC
Confidence 9999887765 46899999987 44
No 153
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.94 E-value=1.5e-07 Score=72.47 Aligned_cols=117 Identities=9% Similarity=0.138 Sum_probs=81.9
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
..+..++++ +++.++++...+. .+.+|+.... .+...-..++...+ ...++++ ++.++++...
T Consensus 164 ~~p~~i~~~-------~~g~l~v~~~~~~--~i~~~~~~g~-~~~~~~~~g~~~~p--~~i~~d~-----~G~l~v~~~~ 226 (286)
T 1q7f_A 164 EFPNGVVVN-------DKQEIFISDNRAH--CVKVFNYEGQ-YLRQIGGEGITNYP--IGVGINS-----NGEILIADNH 226 (286)
T ss_dssp SSEEEEEEC-------SSSEEEEEEGGGT--EEEEEETTCC-EEEEESCTTTSCSE--EEEEECT-----TCCEEEEECS
T ss_pred CCcEEEEEC-------CCCCEEEEECCCC--EEEEEcCCCC-EEEEEccCCccCCC--cEEEECC-----CCCEEEEeCC
Confidence 457889999 8899888877677 7888987543 33322111222332 3347888 7888888887
Q ss_pred CC-cEEEEEcccCcccccceeecccc--cCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCCC
Q psy3599 165 DS-CVYFLDIQSKEHKNAVNKLQGHA--CPVLGVSFNYDESLLATSDYQGLIILWSREKHEP 223 (223)
Q Consensus 165 dg-~v~iwd~~~~~~~~~~~~~~~h~--~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 223 (223)
++ .|.+||.. ++.+..+..+. ..+.+++++|+|+++++ +.|+.|++|++....|
T Consensus 227 ~~~~i~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 227 NNFNLTIFTQD----GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp SSCEEEEECTT----SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred CCEEEEEECCC----CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 76 99999954 45555554433 24789999999987777 5799999999876544
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.93 E-value=3e-08 Score=77.69 Aligned_cols=138 Identities=12% Similarity=0.098 Sum_probs=93.1
Q ss_pred cCCcEEEEEECC-CCceeeeeeeeecCCC-CeeEEEEeecccccCCCCeEE-EEEeCCCeEEEEEecCCCceEEeeeeec
Q psy3599 58 STGVIVSILCDD-LGRLSKGKRLVLSQDC-PITCLSWRSWISREARDPTLL-VNIAANAVCILKVLDKEGAVQLKRKFNV 134 (223)
Q Consensus 58 ~~~~i~~~~~~~-~~~~~~~~~~~~~~~~-~i~~l~~~~~~~~~~~~~~~l-~~~~~~~~~~v~i~d~~~~~~~~~~~~~ 134 (223)
.++.|.. +|. +++.+. .+...... .+..++|+ +++..+ +++..++ .+.+||..++..+... ..
T Consensus 9 ~~~~v~~--~d~~~~~~~~--~~~~~~~~~~~~~~~~s-------~dg~~l~v~~~~~~--~v~~~d~~~~~~~~~~-~~ 74 (337)
T 1pby_B 9 RPDKLVV--IDTEKMAVDK--VITIADAGPTPMVPMVA-------PGGRIAYATVNKSE--SLVKIDLVTGETLGRI-DL 74 (337)
T ss_dssp TTTEEEE--EETTTTEEEE--EEECTTCTTCCCCEEEC-------TTSSEEEEEETTTT--EEEEEETTTCCEEEEE-EC
T ss_pred CCCeEEE--EECCCCcEEE--EEEcCCCCCCccceEEc-------CCCCEEEEEeCCCC--eEEEEECCCCCeEeeE-Ec
Confidence 3455664 344 455443 22222111 57899999 888655 5566677 7899999888665432 22
Q ss_pred ccc----CcceeEEEeeecCcccCCCcEEEEec------------CCCcEEEEEcccCcccccceeecccccCEEEEEEe
Q psy3599 135 NHK----SSKYQVRSTFCPIMSFREGACVVTGS------------EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFN 198 (223)
Q Consensus 135 ~h~----~~~~~i~~~~s~~~~~~~~~~l~sgs------------~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 198 (223)
++. ..+ ....|+| +++.+++++ .++.|.+||+.+ ++.+..+.. ...+.+++|+
T Consensus 75 ~~~~~~~~~~--~~~~~s~-----dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~---~~~~~~~~~-~~~~~~~~~s 143 (337)
T 1pby_B 75 STPEERVKSL--FGAALSP-----DGKTLAIYESPVRLELTHFEVQPTRVALYDAET---LSRRKAFEA-PRQITMLAWA 143 (337)
T ss_dssp CBTTEEEECT--TCEEECT-----TSSEEEEEEEEEEECSSCEEECCCEEEEEETTT---TEEEEEEEC-CSSCCCEEEC
T ss_pred CCcccccccc--cceEECC-----CCCEEEEEecccccccccccccCceEEEEECCC---CcEEEEEeC-CCCcceeEEC
Confidence 321 122 2236888 788888775 579999999988 777666664 3457889999
Q ss_pred cCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 199 YDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 199 ~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|++..++++ ++.|.+||+.+++
T Consensus 144 ~dg~~l~~~--~~~i~~~d~~~~~ 165 (337)
T 1pby_B 144 RDGSKLYGL--GRDLHVMDPEAGT 165 (337)
T ss_dssp TTSSCEEEE--SSSEEEEETTTTE
T ss_pred CCCCEEEEe--CCeEEEEECCCCc
Confidence 999988877 6889999998754
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.92 E-value=8.5e-09 Score=81.30 Aligned_cols=107 Identities=10% Similarity=0.075 Sum_probs=79.2
Q ss_pred CCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcE-EEEecCCCcEEEEEcccCccc
Q psy3599 101 RDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGAC-VVTGSEDSCVYFLDIQSKEHK 179 (223)
Q Consensus 101 ~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~-l~sgs~dg~v~iwd~~~~~~~ 179 (223)
+++.++++++.++ .+.+||..+++.+... ..+....+ ....|+| ++.. ++++..++.|++||+.+ +
T Consensus 9 ~~~~~~v~~~~~~--~v~~~d~~~~~~~~~~-~~~~~~~~--~~~~~s~-----dg~~~~v~~~~~~~i~~~d~~t---~ 75 (349)
T 1jmx_B 9 AGHEYMIVTNYPN--NLHVVDVASDTVYKSC-VMPDKFGP--GTAMMAP-----DNRTAYVLNNHYGDIYGIDLDT---C 75 (349)
T ss_dssp TTCEEEEEEETTT--EEEEEETTTTEEEEEE-ECSSCCSS--CEEEECT-----TSSEEEEEETTTTEEEEEETTT---T
T ss_pred CCCEEEEEeCCCC--eEEEEECCCCcEEEEE-ecCCCCCC--ceeEECC-----CCCEEEEEeCCCCcEEEEeCCC---C
Confidence 7788999998888 8999999988765542 21221122 3447898 6764 56667789999999998 7
Q ss_pred ccceeeccc------ccCEEEEEEecCCCEEEEEeCC------------CcEEEeeCCC
Q psy3599 180 NAVNKLQGH------ACPVLGVSFNYDESLLATSDYQ------------GLIILWSREK 220 (223)
Q Consensus 180 ~~~~~~~~h------~~~v~~v~~~~~~~~l~s~s~d------------~~i~iwd~~~ 220 (223)
+.+..+..+ ...+.+++|+|++..+++++.+ +.|.+||+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 766665532 2236789999999999988865 8999999876
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.89 E-value=1.4e-08 Score=88.94 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=87.1
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeE--E-EeeecCcccCCCcEEEEe
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQV--R-STFCPIMSFREGACVVTG 162 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i--~-~~~s~~~~~~~~~~l~sg 162 (223)
...++.|+ +++.+|+++ ++ .+++||..++.... .+ .+|......+ . ..||| |++.|+.+
T Consensus 18 ~~~~~~w~-------~dg~~~~~~--~~--~i~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~Sp-----dg~~l~~~ 79 (740)
T 4a5s_A 18 KLYSLRWI-------SDHEYLYKQ--EN--NILVFNAEYGNSSV-FL-ENSTFDEFGHSINDYSISP-----DGQFILLE 79 (740)
T ss_dssp CCCCEEEC-------SSSEEEEEE--TT--EEEEEETTTCCEEE-EE-CTTTTTTCCSCCCEEEECT-----TSSEEEEE
T ss_pred cccccEEC-------CCCcEEEEc--CC--cEEEEECCCCceEE-EE-echhhhhhcccccceEECC-----CCCEEEEE
Confidence 46689999 999999886 66 78999999886543 33 3665432111 1 25799 89999988
Q ss_pred cCC---------CcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 163 SED---------SCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 163 s~d---------g~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+.+ +.+++||+.+ +++. .+..|...+..++|||||+.||.++ ++.|++||+.+++
T Consensus 80 ~~~~~~~r~~~~~~~~~~d~~~---~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 80 YNYVKQWRHSYTASYDIYDLNK---RQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLP 143 (740)
T ss_dssp EEEEECSSSCEEEEEEEEETTT---TEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred ECCeeeEEEccceEEEEEECCC---CcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCc
Confidence 876 5667999998 6643 4566777899999999999999985 7899999987754
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.88 E-value=1e-08 Score=89.22 Aligned_cols=118 Identities=12% Similarity=0.191 Sum_probs=81.1
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcce--------------eEEE-eeec
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKY--------------QVRS-TFCP 149 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~--------------~i~~-~~s~ 149 (223)
..+..++|+ |||+.|+.+.++ .+++|+..++....... .++....+ .... .|+|
T Consensus 110 ~~~~~~~~S-------PDG~~la~~~~~---~i~~~~~~~g~~~~l~~-~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 110 RPIQYLCWS-------PVGSKLAYVYQN---NIYLKQRPGDPPFQITF-NGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp SSBCCEEEC-------SSTTCEEEEETT---EEEEESSTTSCCEECCC-CCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred cccccceEC-------CCCCEEEEEECC---eEEEEeCCCCCcEEEec-CCCcCCeEcccccceeeeecccCcccEEECC
Confidence 457889999 999999988754 58899998775443221 13322110 0023 7999
Q ss_pred CcccCCCcEEEEecCCC----------------------------------cEEEEEcccCcccccc--------eeecc
Q psy3599 150 IMSFREGACVVTGSEDS----------------------------------CVYFLDIQSKEHKNAV--------NKLQG 187 (223)
Q Consensus 150 ~~~~~~~~~l~sgs~dg----------------------------------~v~iwd~~~~~~~~~~--------~~~~~ 187 (223)
|++.|++++.|. .|++||+.+ ++.. ..+.+
T Consensus 179 -----DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~---~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 179 -----NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY---PAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp -----TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC---HHHHCCEECCCCHHHHT
T ss_pred -----CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC---CCccceeEccCCccCCC
Confidence 899999887652 788999988 6543 22446
Q ss_pred cccCEEEEEEecCCCEEEEEeCC----CcEEEee----CCCC
Q psy3599 188 HACPVLGVSFNYDESLLATSDYQ----GLIILWS----REKH 221 (223)
Q Consensus 188 h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd----~~~~ 221 (223)
|...+.+++|+||+.++++.... ..|.+|| +.++
T Consensus 251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 78889999999998777774422 2488889 6654
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.84 E-value=3e-08 Score=84.29 Aligned_cols=111 Identities=7% Similarity=-0.008 Sum_probs=82.0
Q ss_pred CeeEEEEeecccccCCCC--eEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 86 PITCLSWRSWISREARDP--TLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~--~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
.+...+|+ +++ ..+++++.+. .+ +||+.++.... .. .+.. ....|+| +|+.|++++
T Consensus 111 ~~~~~~~s-------~dg~~~~~~s~~~~~--~~-l~d~~~g~~~~-l~--~~~~----~~~~~sp-----DG~~la~~~ 168 (582)
T 3o4h_A 111 PMRILSGV-------DTGEAVVFTGATEDR--VA-LYALDGGGLRE-LA--RLPG----FGFVSDI-----RGDLIAGLG 168 (582)
T ss_dssp SBEEEEEE-------ECSSCEEEEEECSSC--EE-EEEEETTEEEE-EE--EESS----CEEEEEE-----ETTEEEEEE
T ss_pred CceeeeeC-------CCCCeEEEEecCCCC--ce-EEEccCCcEEE-ee--cCCC----ceEEECC-----CCCEEEEEE
Confidence 34566777 555 4566666666 33 89988875433 21 2222 2225899 899999888
Q ss_pred CC----CcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCC--cEEEeeCCCCC
Q psy3599 164 ED----SCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQG--LIILWSREKHE 222 (223)
Q Consensus 164 ~d----g~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~ 222 (223)
.+ +.|++||+.+ ++. ..+..|...+..++|+|||..|++++.++ .|++||+.+++
T Consensus 169 ~~~~~~~~i~~~d~~~---g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 169 FFGGGRVSLFTSNLSS---GGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEETTEEEEEEEETTT---CCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred EcCCCCeEEEEEcCCC---CCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 77 7899999988 664 46677888899999999999999888888 89999998765
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.84 E-value=9.1e-09 Score=89.53 Aligned_cols=101 Identities=9% Similarity=0.173 Sum_probs=72.2
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeC---------CCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCC
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAA---------NAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFRE 155 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~---------~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~ 155 (223)
.+.+++|+ |||++|+.++. ++ .+.+||+.++..+... ... .. +.. .|+| +
T Consensus 61 ~~~~~~~S-------pDg~~la~~~~~~~~~~~s~~~--~i~~~d~~~g~~~~~~-~l~--~~---~~~~~~SP-----D 120 (719)
T 1z68_A 61 NASNYGLS-------PDRQFVYLESDYSKLWRYSYTA--TYYIYDLSNGEFVRGN-ELP--RP---IQYLCWSP-----V 120 (719)
T ss_dssp TCSEEEEC-------TTSSEEEEEEEEEECSSSCEEE--EEEEEETTTTEECCSS-CCC--SS---BCCEEECS-----S
T ss_pred ceeeEEEC-------CCCCeEEEEecCceeEEeecce--EEEEEECCCCccccce-ecC--cc---cccceECC-----C
Confidence 48999999 99999998775 34 8999999988652110 011 22 333 7999 7
Q ss_pred CcEEEEecCCCcEEEEEcccCcccccceee-cccccCE-----------------EEEEEecCCCEEEEEeCC
Q psy3599 156 GACVVTGSEDSCVYFLDIQSKEHKNAVNKL-QGHACPV-----------------LGVSFNYDESLLATSDYQ 210 (223)
Q Consensus 156 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-~~h~~~v-----------------~~v~~~~~~~~l~s~s~d 210 (223)
|+.|+.+. ++.|++||+.+ ++..... .++...| .+++|+|||..|++++.|
T Consensus 121 G~~la~~~-~~~i~~~~~~~---g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 121 GSKLAYVY-QNNIYLKQRPG---DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp TTCEEEEE-TTEEEEESSTT---SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred CCEEEEEE-CCeEEEEeCCC---CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 99888875 77999999987 5543322 2333222 489999999999998865
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.82 E-value=5.4e-07 Score=71.72 Aligned_cols=114 Identities=11% Similarity=0.125 Sum_probs=74.2
Q ss_pred eeEEEEeecccccCCCCeEEEEEe-CCCeEEEEEecCCCceE------Ee-----eeeeccccCcceeEEEeeecCcccC
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIA-ANAVCILKVLDKEGAVQ------LK-----RKFNVNHKSSKYQVRSTFCPIMSFR 154 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~d~~~~~~------~~-----~~~~~~h~~~~~~i~~~~s~~~~~~ 154 (223)
+.+++|+ |++++|++++ .+. .+.+|++..... +. ......+...+ ....|+|
T Consensus 157 ~~~~~~s-------pdg~~l~~~~~~~~--~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~sp----- 220 (361)
T 3scy_A 157 LHCVRIT-------PDGKYLLADDLGTD--QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGP--RHLIFNS----- 220 (361)
T ss_dssp EEEEEEC-------TTSSEEEEEETTTT--EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCE--EEEEECT-----
T ss_pred ceEEEEC-------CCCCEEEEEeCCCC--EEEEEEEcCCCCcccccceeecccccceecCCCCCC--eEEEEcC-----
Confidence 4779999 9998665544 456 678887653321 10 11111222232 3348999
Q ss_pred CCcEEEEec-CCCcEEEEEcccCccccc--ceee---cccccCEEEEEEecCCCEEEEEeC--CCcEEEeeCC
Q psy3599 155 EGACVVTGS-EDSCVYFLDIQSKEHKNA--VNKL---QGHACPVLGVSFNYDESLLATSDY--QGLIILWSRE 219 (223)
Q Consensus 155 ~~~~l~sgs-~dg~v~iwd~~~~~~~~~--~~~~---~~h~~~v~~v~~~~~~~~l~s~s~--d~~i~iwd~~ 219 (223)
++++++.++ .++.|.+||+.+ +.. +..+ ..+......++|+|+|++|++++. ++.|.+|++.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~---g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYAD---GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEET---TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCEEEEEcCCCCeEEEEEecC---CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 788776665 689999999986 432 2222 333445789999999998866654 4899999985
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.79 E-value=2.1e-07 Score=73.25 Aligned_cols=137 Identities=11% Similarity=-0.018 Sum_probs=88.3
Q ss_pred cCCcEEEEEECC-CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEE-EEeCCCeEEEEEecCCCceEEeeeeecc
Q psy3599 58 STGVIVSILCDD-LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLV-NIAANAVCILKVLDKEGAVQLKRKFNVN 135 (223)
Q Consensus 58 ~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~v~i~d~~~~~~~~~~~~~~ 135 (223)
.++.|.. +|. +++... .+.......+..++|+ +++.+++ ++..++ .+.+||..+++.+... ..+
T Consensus 19 ~~~~v~~--~d~~~~~~~~--~~~~~~~~~~~~~~~s-------~dg~~~~v~~~~~~--~i~~~d~~t~~~~~~~-~~~ 84 (349)
T 1jmx_B 19 YPNNLHV--VDVASDTVYK--SCVMPDKFGPGTAMMA-------PDNRTAYVLNNHYG--DIYGIDLDTCKNTFHA-NLS 84 (349)
T ss_dssp TTTEEEE--EETTTTEEEE--EEECSSCCSSCEEEEC-------TTSSEEEEEETTTT--EEEEEETTTTEEEEEE-ESC
T ss_pred CCCeEEE--EECCCCcEEE--EEecCCCCCCceeEEC-------CCCCEEEEEeCCCC--cEEEEeCCCCcEEEEE-Ecc
Confidence 4556663 343 455443 2333312267899999 8887554 555677 7899999888665432 112
Q ss_pred cc-----CcceeEEEeeecCcccCCCcEEEEecCC------------CcEEEEEcccCcccccc---eeecccccCEEEE
Q psy3599 136 HK-----SSKYQVRSTFCPIMSFREGACVVTGSED------------SCVYFLDIQSKEHKNAV---NKLQGHACPVLGV 195 (223)
Q Consensus 136 h~-----~~~~~i~~~~s~~~~~~~~~~l~sgs~d------------g~v~iwd~~~~~~~~~~---~~~~~h~~~v~~v 195 (223)
+. ..+ ....|+| +++++++++.+ +.|.+||+.+ ++.. ..+. +...+.++
T Consensus 85 ~~~~~~~~~~--~~~~~sp-----dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~-~~~~~~~~ 153 (349)
T 1jmx_B 85 SVPGEVGRSM--YSFAISP-----DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD---GLEAKPVRTFP-MPRQVYLM 153 (349)
T ss_dssp CSTTEEEECS--SCEEECT-----TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG---GGGBCCSEEEE-CCSSCCCE
T ss_pred cccccccccc--cceEECC-----CCCEEEEEcccccccccccccCCCeEEEEECCC---ccccceeeecc-CCCcccce
Confidence 21 111 2236899 78888888865 8999999987 5433 3333 33468889
Q ss_pred EEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 196 SFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 196 ~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|+|++. ++.++ +.|.+||+.+++
T Consensus 154 ~~s~dg~-l~~~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 154 RAADDGS-LYVAG--PDIYKMDVKTGK 177 (349)
T ss_dssp EECTTSC-EEEES--SSEEEECTTTCC
T ss_pred eECCCCc-EEEcc--CcEEEEeCCCCc
Confidence 9999999 55554 349999998765
No 162
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.72 E-value=1e-07 Score=74.61 Aligned_cols=106 Identities=15% Similarity=0.208 Sum_probs=76.8
Q ss_pred eEEEEEeCCCeEEEEEecCCCceEEeeeeeccccC-cceeEEEeeecCcccCCCc-EEEEecCCCcEEEEEcccCccccc
Q psy3599 104 TLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKS-SKYQVRSTFCPIMSFREGA-CVVTGSEDSCVYFLDIQSKEHKNA 181 (223)
Q Consensus 104 ~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~-~~~~i~~~~s~~~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~~ 181 (223)
.+|++++.++ .+.+||..+++.+... ..++.. .+ ....|+| ++. ++++++.++.|.+||+.+ ++.
T Consensus 2 ~~~v~~~~~~--~v~~~d~~~~~~~~~~-~~~~~~~~~--~~~~~s~-----dg~~l~v~~~~~~~v~~~d~~~---~~~ 68 (337)
T 1pby_B 2 DYILAPARPD--KLVVIDTEKMAVDKVI-TIADAGPTP--MVPMVAP-----GGRIAYATVNKSESLVKIDLVT---GET 68 (337)
T ss_dssp EEEEEEETTT--EEEEEETTTTEEEEEE-ECTTCTTCC--CCEEECT-----TSSEEEEEETTTTEEEEEETTT---CCE
T ss_pred cEEEEcCCCC--eEEEEECCCCcEEEEE-EcCCCCCCc--cceEEcC-----CCCEEEEEeCCCCeEEEEECCC---CCe
Confidence 5788888888 8999999988766543 223321 22 3336999 675 456777789999999998 776
Q ss_pred ceeecc-c----ccCEEEEEEecCCCEEEEEe------------CCCcEEEeeCCCCC
Q psy3599 182 VNKLQG-H----ACPVLGVSFNYDESLLATSD------------YQGLIILWSREKHE 222 (223)
Q Consensus 182 ~~~~~~-h----~~~v~~v~~~~~~~~l~s~s------------~d~~i~iwd~~~~~ 222 (223)
+..+.. + ...+.+++|+|++..+++++ .++.|.+||+.+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 126 (337)
T 1pby_B 69 LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS 126 (337)
T ss_dssp EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc
Confidence 665543 1 22567899999999888886 57999999997653
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.72 E-value=2.6e-06 Score=68.15 Aligned_cols=145 Identities=12% Similarity=0.065 Sum_probs=88.0
Q ss_pred cCCcEEEEEECCCCceeeeee-eeecCCCCeeEEEEeecccccCCCCeEEEEEe-CCCeEEEEEecCC-CceEEe-eeee
Q psy3599 58 STGVIVSILCDDLGRLSKGKR-LVLSQDCPITCLSWRSWISREARDPTLLVNIA-ANAVCILKVLDKE-GAVQLK-RKFN 133 (223)
Q Consensus 58 ~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~d~~-~~~~~~-~~~~ 133 (223)
.++.+..+..+.+|++..... +.......+.++.|+ |+|++|+++. .+. .+.+|+.. ++.... ..+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~s-------pdG~~l~~~~~~~~--~v~~~~~~~~g~~~~~~~~~ 187 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFD-------PTETYLYSADLTAN--KLWTHRKLASGEVELVGSVD 187 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEEC-------TTSSEEEEEETTTT--EEEEEEECTTSCEEEEEEEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEEC-------CCCCEEEEEcCCCC--EEEEEEECCCCCEEEeeeEe
Confidence 345566566665565543211 111225678999999 9998877665 345 68888887 554321 1111
Q ss_pred c-cccCcceeEEEeeecCcccCCCcEEEEecC-CCcEEEEEcccCcccccc------eeec----cccc------CEEEE
Q psy3599 134 V-NHKSSKYQVRSTFCPIMSFREGACVVTGSE-DSCVYFLDIQSKEHKNAV------NKLQ----GHAC------PVLGV 195 (223)
Q Consensus 134 ~-~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~-dg~v~iwd~~~~~~~~~~------~~~~----~h~~------~v~~v 195 (223)
. .|...+ ....|+| +++++++++. ++.|.+|++... .++.. ..+. +|.. .+..+
T Consensus 188 ~~~~g~~p--~~~~~sp-----dg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 259 (365)
T 1jof_A 188 APDPGDHP--RWVAMHP-----TGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADV 259 (365)
T ss_dssp CSSTTCCE--EEEEECT-----TSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEE
T ss_pred cCCCCCCC--CEeEECC-----CCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEEcCCCCcCCcccccccccccccE
Confidence 0 122332 3348999 7888777664 689999987530 03321 1222 2232 48899
Q ss_pred E-EecCCCEEEEEeCC-C-----cEEEeeCC
Q psy3599 196 S-FNYDESLLATSDYQ-G-----LIILWSRE 219 (223)
Q Consensus 196 ~-~~~~~~~l~s~s~d-~-----~i~iwd~~ 219 (223)
+ |+|+|++|++++.+ + .|.+|++.
T Consensus 260 ~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 260 CALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 9 99999988776533 2 89999985
No 164
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.72 E-value=6e-07 Score=77.83 Aligned_cols=126 Identities=15% Similarity=0.158 Sum_probs=84.0
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCC---eEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANA---VCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l 159 (223)
...+.++.|+ |||+.|++++.+. ...+.+||..++..........+......+.. .|+|.. ++.++
T Consensus 257 ~~~~~~~~~s-------pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~---dg~~l 326 (706)
T 2z3z_A 257 EKFLTNLSWS-------PDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGS---NNQFI 326 (706)
T ss_dssp TCEEEEEEEC-------TTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTC---SSEEE
T ss_pred ceeEeeEEEE-------CCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCC---CCEEE
Confidence 5678999999 9999888765332 22688899988733333321122211100222 688710 37789
Q ss_pred EEecCCCcEEEEEcc-cCcccccceeecccccCEEE-EEEecCCCEEEEEeC-CC----cEEEeeCCCCC
Q psy3599 160 VTGSEDSCVYFLDIQ-SKEHKNAVNKLQGHACPVLG-VSFNYDESLLATSDY-QG----LIILWSREKHE 222 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~-~~~~~~~~~~~~~h~~~v~~-v~~~~~~~~l~s~s~-d~----~i~iwd~~~~~ 222 (223)
++++.|+.+++|++. . +..+..+..|...+.. +.|+|++..|+.++. ++ .|..||+.+++
T Consensus 327 ~~~~~~g~~~l~~~~~~---~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 327 WQSRRDGWNHLYLYDTT---GRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp EEECTTSSCEEEEEETT---SCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred EEEccCCccEEEEEECC---CCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 999999999999987 4 5566777777777876 799999987766554 44 56777776553
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.72 E-value=1.1e-07 Score=81.84 Aligned_cols=117 Identities=13% Similarity=0.089 Sum_probs=81.5
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCC--------CeEEEEEecCCC------ceEEeeeeec-cccCcceeEEE-ee
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAAN--------AVCILKVLDKEG------AVQLKRKFNV-NHKSSKYQVRS-TF 147 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~i~d~~~------~~~~~~~~~~-~h~~~~~~i~~-~~ 147 (223)
...+.+++|+ |||+.|+.++.+ ....+.+||..+ +.. ... . .+... +.. .|
T Consensus 129 ~~~~~~~~~s-------pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l--~~~~~~~---~~~~~~ 195 (662)
T 3azo_A 129 GLRWADPVLL-------PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-REL--SDDAHRF---VTGPRL 195 (662)
T ss_dssp CEEEEEEEEE-------TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EES--SCSCSSE---ECCCEE
T ss_pred CccccCcEEC-------CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEE--EecCCCc---ccCceE
Confidence 3467889999 999998877754 223688899887 532 222 2 22222 444 79
Q ss_pred ecCcccCCCcEEEEecCC--------CcEEEEEcc-cCccc---ccceeecccccCEEEEEEecCCCEEEEEeCCC--cE
Q psy3599 148 CPIMSFREGACVVTGSED--------SCVYFLDIQ-SKEHK---NAVNKLQGHACPVLGVSFNYDESLLATSDYQG--LI 213 (223)
Q Consensus 148 s~~~~~~~~~~l~sgs~d--------g~v~iwd~~-~~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i 213 (223)
+| +++.|+.++.+ ..|++||+. + + +......+|...+..+.|+|+|.++++++.++ .|
T Consensus 196 Sp-----DG~~la~~~~~~~~~~~~~~~i~~~d~~~~---g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l 267 (662)
T 3azo_A 196 SP-----DGRQAVWLAWDHPRMPWEGTELKTARVTED---GRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNL 267 (662)
T ss_dssp CT-----TSSEEEEEEECTTCCTTTCEEEEEEEECTT---SCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEE
T ss_pred CC-----CCCEEEEEECCCCCCCCCCcEEEEEEECCC---CcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEE
Confidence 99 89988877755 379999998 5 4 33334444567899999999999888888888 56
Q ss_pred EEeeCCCC
Q psy3599 214 ILWSREKH 221 (223)
Q Consensus 214 ~iwd~~~~ 221 (223)
.+||+.++
T Consensus 268 ~~~~~~~~ 275 (662)
T 3azo_A 268 HRVDPATG 275 (662)
T ss_dssp EEECTTTC
T ss_pred EEEECCCC
Confidence 66666444
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.69 E-value=3.1e-06 Score=66.75 Aligned_cols=120 Identities=8% Similarity=0.059 Sum_probs=84.6
Q ss_pred eeEEEEeecccccCCC-CeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCc-ccCCCcEEEEecC
Q psy3599 87 ITCLSWRSWISREARD-PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIM-SFREGACVVTGSE 164 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~-~~~~~~~l~sgs~ 164 (223)
...++++ ++ +.++++...+. .|++|+..++..+.......+.... ...+++|.. ...++..+++...
T Consensus 198 p~gia~d-------~~~g~l~v~d~~~~--~I~~~~~~~G~~~~~~~~~~~~~~~--~~~~~~pg~~~~~~g~~~v~~~~ 266 (329)
T 3fvz_A 198 PHSLALV-------PHLDQLCVADRENG--RIQCFKTDTKEFVREIKHASFGRNV--FAISYIPGFLFAVNGKPYFGDQE 266 (329)
T ss_dssp EEEEEEE-------TTTTEEEEEETTTT--EEEEEETTTCCEEEEECCTTTTTCE--EEEEEETTEEEEEECCCCTTCSC
T ss_pred CcEEEEE-------CCCCEEEEEECCCC--EEEEEECCCCcEEEEEeccccCCCc--ceeeecCCEEEEeCCCEEeccCC
Confidence 7789999 77 88888887888 8999999877666543211233332 222566610 0012334444455
Q ss_pred CCcEEEEEcccCcccccceee---cccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKL---QGHACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
+..|++||..+ ++.+..+ .++-..+..++++|+|.++++...++.|++|++..
T Consensus 267 ~~~v~~~~~~~---g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 267 PVQGFVMNFSS---GEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCEEEEETTT---CCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CcEEEEEEcCC---CeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 56899999998 8877776 35667789999999998888888999999999754
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.65 E-value=6.3e-06 Score=63.28 Aligned_cols=115 Identities=10% Similarity=0.172 Sum_probs=81.6
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
...+..++++ +++.++++...+. .+.+|+.... .+...-..++...+ ...+++| ++.++++..
T Consensus 120 ~~~~~~i~~~-------~~g~l~v~~~~~~--~i~~~~~~g~-~~~~~~~~~~~~~p--~~i~~~~-----~g~l~v~~~ 182 (286)
T 1q7f_A 120 LQHPRGVTVD-------NKGRIIVVECKVM--RVIIFDQNGN-VLHKFGCSKHLEFP--NGVVVND-----KQEIFISDN 182 (286)
T ss_dssp CSCEEEEEEC-------TTSCEEEEETTTT--EEEEECTTSC-EEEEEECTTTCSSE--EEEEECS-----SSEEEEEEG
T ss_pred CCCceEEEEe-------CCCCEEEEECCCC--EEEEEcCCCC-EEEEeCCCCccCCc--EEEEECC-----CCCEEEEEC
Confidence 3567899999 8899888877777 7888886543 33322101222232 3337888 688888888
Q ss_pred CCCcEEEEEcccCcccccceeeccc--ccCEEEEEEecCCCEEEEEeCCC-cEEEeeCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGH--ACPVLGVSFNYDESLLATSDYQG-LIILWSRE 219 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~s~d~-~i~iwd~~ 219 (223)
.++.|++||... +.+..+..+ ...+..++++++|+++++...++ .|.+||..
T Consensus 183 ~~~~i~~~~~~g----~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 183 RAHCVKVFNYEG----QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp GGTEEEEEETTC----CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCCEEEEEcCCC----CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 899999999754 445555432 35688999999999988888776 99999964
No 168
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.63 E-value=2.2e-07 Score=80.79 Aligned_cols=115 Identities=11% Similarity=0.101 Sum_probs=81.3
Q ss_pred CCeeEEEEeecccccCCCCeEEEEE-----eCCCeEEEEEecCCCceEE-eeeeeccccCcceeEEEeeecCcccCCCcE
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNI-----AANAVCILKVLDKEGAVQL-KRKFNVNHKSSKYQVRSTFCPIMSFREGAC 158 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~-----~~~~~~~v~i~d~~~~~~~-~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~ 158 (223)
..+..+.|| |||++|+.+ +++. .+++||+.++..+ ...+ ..... ....|+| ++..
T Consensus 121 ~~~~~~~~S-------PDG~~la~~~~~~G~~~~--~i~v~dl~tg~~~~~~~~--~~~~~---~~~~wsp-----Dg~~ 181 (695)
T 2bkl_A 121 VSLGTWAVS-------WDGKKVAFAQKPNAADEA--VLHVIDVDSGEWSKVDVI--EGGKY---ATPKWTP-----DSKG 181 (695)
T ss_dssp EEEEEEEEC-------TTSSEEEEEEEETTCSCC--EEEEEETTTCCBCSSCCB--SCCTT---CCCEECT-----TSSE
T ss_pred EEEEEEEEC-------CCCCEEEEEECCCCCceE--EEEEEECCCCCCcCCccc--Ccccc---cceEEec-----CCCE
Confidence 368899999 999998843 2335 8999999988654 2111 11110 1126999 7999
Q ss_pred EEEecCCCc-------------EEEEEcccCcccc----cceeecccccCEEEEEEecCCCEEEEEeCCC----cEEEee
Q psy3599 159 VVTGSEDSC-------------VYFLDIQSKEHKN----AVNKLQGHACPVLGVSFNYDESLLATSDYQG----LIILWS 217 (223)
Q Consensus 159 l~sgs~dg~-------------v~iwd~~~~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~----~i~iwd 217 (223)
|+.++.|.. |++|++.+ +. ++.....|...+..+.|+|+|..|+.++.++ .|.+||
T Consensus 182 l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t---~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~ 258 (695)
T 2bkl_A 182 FYYEWLPTDPSIKVDERPGYTTIRYHTLGT---EPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKR 258 (695)
T ss_dssp EEEEECCCCTTSCGGGGGGGCEEEEEETTS---CGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEEC
T ss_pred EEEEEecCCCCCccccCCCCCEEEEEECCC---CchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEc
Confidence 998888776 99999987 43 4444455666789999999999888877665 677776
Q ss_pred CCCC
Q psy3599 218 REKH 221 (223)
Q Consensus 218 ~~~~ 221 (223)
..++
T Consensus 259 ~~~~ 262 (695)
T 2bkl_A 259 PGEK 262 (695)
T ss_dssp TTCS
T ss_pred CCCC
Confidence 5443
No 169
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.60 E-value=5.1e-07 Score=72.98 Aligned_cols=105 Identities=11% Similarity=0.070 Sum_probs=74.4
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
.. |+.++|. +.+|+++ .++ .+++||..+...... . ..|.... ....+.+ ++ +++++
T Consensus 88 p~-V~~l~fd---------~~~L~v~-~~~--~l~v~dv~sl~~~~~-~-~~~~~~v--~~i~~~~------p~-~av~~ 143 (388)
T 1xip_A 88 PD-VIFVCFH---------GDQVLVS-TRN--ALYSLDLEELSEFRT-V-TSFEKPV--FQLKNVN------NT-LVILN 143 (388)
T ss_dssp TT-EEEEEEE---------TTEEEEE-ESS--EEEEEESSSTTCEEE-E-EECSSCE--EEEEECS------SE-EEEEE
T ss_pred CC-eeEEEEC---------CCEEEEE-cCC--cEEEEEchhhhccCc-c-ceeecce--eeEEecC------CC-EEEEE
Confidence 44 8888885 6777777 566 789999875543322 2 2454442 2223433 23 88889
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.||.+.+||+.. +.... +...|+|++|+|+| ++.|..||++++|+...+
T Consensus 144 ~dG~L~v~dl~~---~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 144 SVNDLSALDLRT---KSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp TTSEEEEEETTT---CCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETT
T ss_pred CCCCEEEEEccC---Ccccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence 999999999997 55432 45679999999999 678889999999987643
No 170
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.57 E-value=7.7e-06 Score=62.05 Aligned_cols=116 Identities=13% Similarity=0.044 Sum_probs=81.5
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCC
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSED 165 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~d 165 (223)
.+..++++ +++.++++...++ .+.+|+..+....... ..+...+ ...++.+ ++.++++...+
T Consensus 151 ~p~~i~~~-------~~g~l~v~~~~~~--~i~~~~~~~~~~~~~~--~~~~~~p--~~i~~d~-----~g~l~v~~~~~ 212 (270)
T 1rwi_B 151 DPDGVAVD-------NSGNVYVTDTDNN--RVVKLEAESNNQVVLP--FTDITAP--WGIAVDE-----AGTVYVTEHNT 212 (270)
T ss_dssp SCCCEEEC-------TTCCEEEEEGGGT--EEEEECTTTCCEEECC--CSSCCSE--EEEEECT-----TCCEEEEETTT
T ss_pred CceeEEEe-------CCCCEEEEECCCC--EEEEEecCCCceEeec--ccCCCCc--eEEEECC-----CCCEEEEECCC
Confidence 56778888 8888877776666 6788898766443321 1222232 3336787 68888888888
Q ss_pred CcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 166 SCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 166 g~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+.|.+||... .........+-..+.+++++++|+++++...++.|+++++...+
T Consensus 213 ~~v~~~~~~~---~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 213 NQVVKLLAGS---TTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp SCEEEECTTC---SCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CcEEEEcCCC---CcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 8999999876 43322222333568999999999988898899999999986543
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.56 E-value=1.6e-06 Score=75.85 Aligned_cols=122 Identities=8% Similarity=0.080 Sum_probs=78.3
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcce--------------eEE-Eeee
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKY--------------QVR-STFC 148 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~--------------~i~-~~~s 148 (223)
...+....|| |||+.|+.+.++ .+.+|+..++....... .++....+ ... ..||
T Consensus 111 ~~~~~~~~~S-------PdG~~la~~~~~---~i~~~~~~~~~~~~lt~-~g~~~~~~~g~~~~v~~ee~~~~~~~~~wS 179 (740)
T 4a5s_A 111 PNNTQWVTWS-------PVGHKLAYVWNN---DIYVKIEPNLPSYRITW-TGKEDIIYNGITDWVYEEEVFSAYSALWWS 179 (740)
T ss_dssp CTTEEEEEEC-------SSTTCEEEEETT---EEEEESSTTSCCEECCS-CCBTTTEEESBCCHHHHHHTSSSSBCEEEC
T ss_pred CCcceeeEEC-------CCCCEEEEEECC---eEEEEECCCCceEEEcC-CCCccceecCcccccccchhcCCCcceEEC
Confidence 5678999999 999999988764 47889988775443222 13332210 011 2699
Q ss_pred cCcccCCCcEEEEecCCC------------------------------------cEEEEEccc---Ccccccceeec---
Q psy3599 149 PIMSFREGACVVTGSEDS------------------------------------CVYFLDIQS---KEHKNAVNKLQ--- 186 (223)
Q Consensus 149 ~~~~~~~~~~l~sgs~dg------------------------------------~v~iwd~~~---~~~~~~~~~~~--- 186 (223)
| ||+.|+.++.|. .|++||+.+ .... ....+.
T Consensus 180 p-----Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~-~~~~l~~~~ 253 (740)
T 4a5s_A 180 P-----NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA-TSIQITAPA 253 (740)
T ss_dssp T-----TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC-CEEEECCCH
T ss_pred C-----CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc-eEEEecCCc
Confidence 9 899888875432 366677654 2100 112222
Q ss_pred ---ccccCEEEEEEecCCCEEEEEe----CCCcEEEeeCCCCC
Q psy3599 187 ---GHACPVLGVSFNYDESLLATSD----YQGLIILWSREKHE 222 (223)
Q Consensus 187 ---~h~~~v~~v~~~~~~~~l~s~s----~d~~i~iwd~~~~~ 222 (223)
+|...+..++|+|||..++... .+..|++||+.+++
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 3677799999999999666553 23469999988765
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.54 E-value=5.1e-06 Score=65.48 Aligned_cols=92 Identities=22% Similarity=0.207 Sum_probs=65.4
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccc-cceee---------
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKN-AVNKL--------- 185 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~-~~~~~--------- 185 (223)
.+.+||..++..+.. +..++...+ ...+++| ++.++++...++.|++||... .. .+..+
T Consensus 70 ~i~~~d~~~g~~~~~-~~~~~~~~p--~gia~d~-----~g~l~v~d~~~~~v~~~~~~g---~~~~~~~~~~~~~~g~~ 138 (329)
T 3fvz_A 70 TILVIDPNNAEILQS-SGKNLFYLP--HGLSIDT-----DGNYWVTDVALHQVFKLDPHS---KEGPLLILGRSMQPGSD 138 (329)
T ss_dssp CEEEECTTTCCEEEE-ECTTTCSSE--EEEEECT-----TSCEEEEETTTTEEEEECTTC---SSCCSEEESBTTBCCCS
T ss_pred cEEEEECCCCeEEec-cCCCccCCc--eEEEECC-----CCCEEEEECCCCEEEEEeCCC---CeEEEEEecccCCCCCC
Confidence 477889887765543 221333332 3347888 788999999999999999765 32 44444
Q ss_pred cccccCEEEEEEec-CCCEEEEEe-CCCcEEEeeC
Q psy3599 186 QGHACPVLGVSFNY-DESLLATSD-YQGLIILWSR 218 (223)
Q Consensus 186 ~~h~~~v~~v~~~~-~~~~l~s~s-~d~~i~iwd~ 218 (223)
.++-.....++++| ++.++++.+ .++.|++||.
T Consensus 139 ~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 139 QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp TTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred ccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence 23444689999999 788888886 6899999994
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.53 E-value=2e-06 Score=74.04 Aligned_cols=115 Identities=12% Similarity=0.051 Sum_probs=75.6
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCC------eEEEEEecCC-Cc--eEEeeeeeccccCcceeEEE-eeecCcccCC
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANA------VCILKVLDKE-GA--VQLKRKFNVNHKSSKYQVRS-TFCPIMSFRE 155 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~d~~-~~--~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~ 155 (223)
.+..+.|+ |||++|+.++.+. -..+.+||+. ++ ....... .+|... +.. .|+| +
T Consensus 189 ~~~~~~~S-------pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~~~~~~---~~~~~~sp-----d 252 (662)
T 3azo_A 189 FVTGPRLS-------PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-GGPEEA---IAQAEWAP-----D 252 (662)
T ss_dssp EECCCEEC-------TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-EETTBC---EEEEEECT-----T
T ss_pred cccCceEC-------CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-CCCCce---EcceEECC-----C
Confidence 45567888 9999998766321 1268888988 45 1222222 244444 444 7999 7
Q ss_pred CcEEEEecCCC--cEEEEEcccCcccccceeecccccC--------EEEEEEecCCCEEEEEeCCCcEEEe--eCCC
Q psy3599 156 GACVVTGSEDS--CVYFLDIQSKEHKNAVNKLQGHACP--------VLGVSFNYDESLLATSDYQGLIILW--SREK 220 (223)
Q Consensus 156 ~~~l~sgs~dg--~v~iwd~~~~~~~~~~~~~~~h~~~--------v~~v~~~~~~~~l~s~s~d~~i~iw--d~~~ 220 (223)
+.++++++.++ .|++||..+ ++.......+... +.+++|+|++.++++++. +.++|| |+.+
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~---~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPAT---GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTT---CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT
T ss_pred CeEEEEECCCCCeEEEEEECCC---CceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC
Confidence 88888888888 566666655 4443333333222 567889999999999998 999999 5543
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.51 E-value=1.7e-06 Score=69.30 Aligned_cols=114 Identities=14% Similarity=0.007 Sum_probs=78.9
Q ss_pred EEEeecccccCCCCeEEEEEeC-CCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcE
Q psy3599 90 LSWRSWISREARDPTLLVNIAA-NAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCV 168 (223)
Q Consensus 90 l~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v 168 (223)
.+|+ |||+.|+.++. ++...+.+||..++..... . .++.... ....|+| ++..|+.++.++.+
T Consensus 41 ~~~S-------pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~l-t-~~~~~~~--~~~~~sp-----dg~~l~~~~~~~~l 104 (388)
T 3pe7_A 41 KCFT-------RDGSKLLFGGAFDGPWNYYLLDLNTQVATQL-T-EGRGDNT--FGGFLSP-----DDDALFYVKDGRNL 104 (388)
T ss_dssp CCBC-------TTSCEEEEEECTTSSCEEEEEETTTCEEEEC-C-CSSCBCS--SSCEECT-----TSSEEEEEETTTEE
T ss_pred ccCC-------CCCCEEEEEEcCCCCceEEEEeCCCCceEEe-e-eCCCCCc--cceEEcC-----CCCEEEEEeCCCeE
Confidence 7899 99999888775 5522466788888765432 2 2443331 1236999 89999999999999
Q ss_pred EEEEcccCcccccceeecccccCEEEEE--EecCCCEEEEE----------------------eCCCcEEEeeCCCCC
Q psy3599 169 YFLDIQSKEHKNAVNKLQGHACPVLGVS--FNYDESLLATS----------------------DYQGLIILWSREKHE 222 (223)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~--~~~~~~~l~s~----------------------s~d~~i~iwd~~~~~ 222 (223)
++||+.+ ++....+..+...+.... ++|++..++.. +.+..|.+||+.+++
T Consensus 105 ~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 105 MRVDLAT---LEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp EEEETTT---CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred EEEECCC---CcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 9999998 665555555555454343 48899888742 234679999998765
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.50 E-value=1.5e-06 Score=75.70 Aligned_cols=115 Identities=9% Similarity=0.101 Sum_probs=82.3
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeC-CC--eEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEe
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAA-NA--VCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTG 162 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~-~~--~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sg 162 (223)
.+..+.|| |||++|+.+++ ++ ...+++||+.++..+.... .+.. . -...|+| |++.|+.+
T Consensus 126 ~~~~~~~S-------PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--~~~~-~--~~~~wsp-----Dg~~l~~~ 188 (710)
T 2xdw_A 126 ALRGYAFS-------EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--ERVK-F--SCMAWTH-----DGKGMFYN 188 (710)
T ss_dssp EEEEEEEC-------TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE--EEEC-S--CCEEECT-----TSSEEEEE
T ss_pred EEEEEEEC-------CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc--cCcc-c--ceEEEEe-----CCCEEEEE
Confidence 57889999 99999886553 22 2268999999987665332 2211 1 1226999 79988888
Q ss_pred cCCCc----------------EEEEEcccCcccc----cceeecccccCEEEEEEecCCCEEEEEeC-----CCcEEEee
Q psy3599 163 SEDSC----------------VYFLDIQSKEHKN----AVNKLQGHACPVLGVSFNYDESLLATSDY-----QGLIILWS 217 (223)
Q Consensus 163 s~dg~----------------v~iwd~~~~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-----d~~i~iwd 217 (223)
+.++. |++|++.+ +. ++.....|...+..+.|+|+|..|+.++. +..|++||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~t---~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 265 (710)
T 2xdw_A 189 AYPQQDGKSDGTETSTNLHQKLYYHVLGT---DQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (710)
T ss_dssp ECCCCSSCCSSSCCCCCCCCEEEEEETTS---CGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred EECCccccccccccccCCCCEEEEEECCC---CcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEE
Confidence 87765 99999987 43 23333345666889999999998887764 56899999
Q ss_pred CCC
Q psy3599 218 REK 220 (223)
Q Consensus 218 ~~~ 220 (223)
+.+
T Consensus 266 ~~~ 268 (710)
T 2xdw_A 266 LQQ 268 (710)
T ss_dssp GGG
T ss_pred Ccc
Confidence 875
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.49 E-value=5.4e-06 Score=66.28 Aligned_cols=118 Identities=8% Similarity=-0.092 Sum_probs=79.6
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEE--
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVT-- 161 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~s-- 161 (223)
...+....|+ ||++.|+.++.+. .+.+||+.+++.... + ..+..........++| ++..++.
T Consensus 80 ~~~~~~~~~s-------pdg~~l~~~~~~~--~l~~~d~~~g~~~~~-~-~~~~~~~~~~~~~~~~-----dg~~l~~~~ 143 (388)
T 3pe7_A 80 GDNTFGGFLS-------PDDDALFYVKDGR--NLMRVDLATLEENVV-Y-QVPAEWVGYGTWVANS-----DCTKLVGIE 143 (388)
T ss_dssp CBCSSSCEEC-------TTSSEEEEEETTT--EEEEEETTTCCEEEE-E-ECCTTEEEEEEEEECT-----TSSEEEEEE
T ss_pred CCCccceEEc-------CCCCEEEEEeCCC--eEEEEECCCCcceee-e-echhhcccccceeECC-----CCCeecccc
Confidence 3445567899 9999999988877 788999988764432 2 1333321001113466 6777763
Q ss_pred --------------------ecCCCcEEEEEcccCcccccceeecccccCEEEEEEec-CCCEEEEEeCC------CcEE
Q psy3599 162 --------------------GSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNY-DESLLATSDYQ------GLII 214 (223)
Q Consensus 162 --------------------gs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d------~~i~ 214 (223)
...+..|++||+.+ ++. ..+..+...+..+.|+| ++..|+.++.+ ..|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~---g~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 144 IRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT---GES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp EEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT---CCE-EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEE
T ss_pred ccCcccccccccchhhhhhccCCcceEEEEECCC---Cce-EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEE
Confidence 23446799999988 653 34445667789999999 99988877753 3688
Q ss_pred EeeCCCC
Q psy3599 215 LWSREKH 221 (223)
Q Consensus 215 iwd~~~~ 221 (223)
++|+..+
T Consensus 220 ~~d~~~~ 226 (388)
T 3pe7_A 220 LINEDGT 226 (388)
T ss_dssp EEETTSC
T ss_pred EEeCCCC
Confidence 8887654
No 177
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.41 E-value=1.2e-05 Score=61.97 Aligned_cols=135 Identities=9% Similarity=0.088 Sum_probs=90.0
Q ss_pred cCCcEEEEEECC-CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccc
Q psy3599 58 STGVIVSILCDD-LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNH 136 (223)
Q Consensus 58 ~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h 136 (223)
.++.|. .+|+ +|+++- .+..+....+.++.++ ++|++|++ . +. .+..+|. +++.+... . .+
T Consensus 13 ~~~~v~--~~d~~tG~~~w--~~~~~~~~~~~~~~~~-------pdG~ilvs-~-~~--~V~~~d~-~G~~~W~~-~-~~ 74 (276)
T 3no2_A 13 GWNKIA--IINKDTKEIVW--EYPLEKGWECNSVAAT-------KAGEILFS-Y-SK--GAKMITR-DGRELWNI-A-AP 74 (276)
T ss_dssp TCSEEE--EEETTTTEEEE--EEECCTTCCCCEEEEC-------TTSCEEEE-C-BS--EEEEECT-TSCEEEEE-E-CC
T ss_pred CCCEEE--EEECCCCeEEE--EeCCCccCCCcCeEEC-------CCCCEEEe-C-CC--CEEEECC-CCCEEEEE-c-CC
Confidence 456666 5566 788764 2333312468899999 89999883 3 44 5778898 67666643 2 22
Q ss_pred cCcceeEEE-eeecCcccCCCcEEEEecC-CCcEEEEEcccCcccccceeec------ccccCEEEEEEecCCCEEEEEe
Q psy3599 137 KSSKYQVRS-TFCPIMSFREGACVVTGSE-DSCVYFLDIQSKEHKNAVNKLQ------GHACPVLGVSFNYDESLLATSD 208 (223)
Q Consensus 137 ~~~~~~i~~-~~s~~~~~~~~~~l~sgs~-dg~v~iwd~~~~~~~~~~~~~~------~h~~~v~~v~~~~~~~~l~s~s 208 (223)
.... +.. .+.+ +++++++.+. ++.+..+|. . ++.+..+. .+......+...++|+++++..
T Consensus 75 ~~~~--~~~~~~~~-----dG~~lv~~~~~~~~v~~vd~-~---Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~ 143 (276)
T 3no2_A 75 AGCE--MQTARILP-----DGNALVAWCGHPSTILEVNM-K---GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF 143 (276)
T ss_dssp TTCE--EEEEEECT-----TSCEEEEEESTTEEEEEECT-T---SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET
T ss_pred CCcc--ccccEECC-----CCCEEEEecCCCCEEEEEeC-C---CCEEEEEeccCCCCcccccccCceECCCCCEEEEec
Confidence 2222 444 6777 7999998877 777777775 3 45554443 2222345567789999999999
Q ss_pred CCCcEEEeeCCCCC
Q psy3599 209 YQGLIILWSREKHE 222 (223)
Q Consensus 209 ~d~~i~iwd~~~~~ 222 (223)
.++.|..||.. ++
T Consensus 144 ~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 144 ATSEVREIAPN-GQ 156 (276)
T ss_dssp TTTEEEEECTT-SC
T ss_pred CCCEEEEECCC-CC
Confidence 99999999987 54
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.37 E-value=6e-05 Score=58.98 Aligned_cols=116 Identities=13% Similarity=0.151 Sum_probs=73.5
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCC----CeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAAN----AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGAC 158 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~ 158 (223)
...+.++.++ +++.++++...+ . .+.+||..++..........+... +.. .++| ++.+
T Consensus 86 ~~~~~~i~~~-------~dg~l~v~~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~---~~~i~~d~-----~g~l 148 (333)
T 2dg1_A 86 KANPAAIKIH-------KDGRLFVCYLGDFKSTG--GIFAATENGDNLQDIIEDLSTAYC---IDDMVFDS-----KGGF 148 (333)
T ss_dssp SSSEEEEEEC-------TTSCEEEEECTTSSSCC--EEEEECTTSCSCEEEECSSSSCCC---EEEEEECT-----TSCE
T ss_pred CCCcceEEEC-------CCCcEEEEeCCCCCCCc--eEEEEeCCCCEEEEEEccCccCCc---ccceEECC-----CCCE
Confidence 5678899999 899988887665 4 567788876643211100112222 444 7888 6887
Q ss_pred EEEecC------CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEE-EEEeCCCcEEEeeCCC
Q psy3599 159 VVTGSE------DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLL-ATSDYQGLIILWSREK 220 (223)
Q Consensus 159 l~sgs~------dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~ 220 (223)
+++... .+.|+.+|... ++.. .+..+...+..++|+|++..+ ++.+.++.|.+||+.+
T Consensus 149 ~v~~~~~~~~~~~~~l~~~~~~~---~~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 149 YFTDFRGYSTNPLGGVYYVSPDF---RTVT-PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp EEEECCCBTTBCCEEEEEECTTS---CCEE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEEeccccccCCCceEEEEeCCC---CEEE-EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 777654 24566666554 3332 222233457889999999855 5555678999999853
No 179
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.36 E-value=3.7e-06 Score=73.62 Aligned_cols=115 Identities=10% Similarity=0.046 Sum_probs=78.9
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCC-C--eEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEe
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAAN-A--VCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTG 162 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~-~--~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sg 162 (223)
.+..+.|+ |||++|+.+++. + ...+++||+.++..+..... .... ....|+| + +.|+.+
T Consensus 164 ~~~~~~~S-------PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~---~~~~--~~~~wsp-----D-~~l~~~ 225 (741)
T 1yr2_A 164 ALDAWAAS-------DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK---WVKF--SGLAWLG-----N-DALLYS 225 (741)
T ss_dssp EEEEEEEC-------TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE---EEES--CCCEEST-----T-SEEEEE
T ss_pred EEEeEEEC-------CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC---Ccee--ccEEEEC-----C-CEEEEE
Confidence 57789999 999998876532 2 23789999998876543211 1110 1126999 8 888777
Q ss_pred cCCCc--------------EEEEEcccCcccc----cceeecccccCEEEEEEecCCCEEEEEeCCC-----cEEEeeCC
Q psy3599 163 SEDSC--------------VYFLDIQSKEHKN----AVNKLQGHACPVLGVSFNYDESLLATSDYQG-----LIILWSRE 219 (223)
Q Consensus 163 s~dg~--------------v~iwd~~~~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~ 219 (223)
+.++. |++|++.+ +. ++.....+...+..+.|+|+|..|+..+.++ .|++||+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~v~~~~lgt---~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~ 302 (741)
T 1yr2_A 226 RFAEPKEGQAFQALNYNQTVWLHRLGT---PQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT 302 (741)
T ss_dssp ECCCC--------CCCCCEEEEEETTS---CGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE
T ss_pred EecCcccccccccCCCCCEEEEEECCC---CchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC
Confidence 76654 88999877 33 3333333444688999999999888777543 79999987
Q ss_pred CC
Q psy3599 220 KH 221 (223)
Q Consensus 220 ~~ 221 (223)
++
T Consensus 303 ~~ 304 (741)
T 1yr2_A 303 NG 304 (741)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.34 E-value=4.1e-05 Score=58.93 Aligned_cols=133 Identities=11% Similarity=0.038 Sum_probs=89.6
Q ss_pred EECCCCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeC-CCeEEEEEecCCCceEEeeeeec----cccCcc
Q psy3599 66 LCDDLGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAA-NAVCILKVLDKEGAVQLKRKFNV----NHKSSK 140 (223)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~d~~~~~~~~~~~~~----~h~~~~ 140 (223)
.++++|+++-. +.......+.++.+. ++|.++++.+. +. .+..+|. .++.+...-.. ++....
T Consensus 60 ~~d~~G~~~W~--~~~~~~~~~~~~~~~-------~dG~~lv~~~~~~~--~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~ 127 (276)
T 3no2_A 60 MITRDGRELWN--IAAPAGCEMQTARIL-------PDGNALVAWCGHPS--TILEVNM-KGEVLSKTEFETGIERPHAQF 127 (276)
T ss_dssp EECTTSCEEEE--EECCTTCEEEEEEEC-------TTSCEEEEEESTTE--EEEEECT-TSCEEEEEEECCSCSSGGGSC
T ss_pred EECCCCCEEEE--EcCCCCccccccEEC-------CCCCEEEEecCCCC--EEEEEeC-CCCEEEEEeccCCCCcccccc
Confidence 67777776642 333323568888898 99999998776 55 5556676 45444432100 111111
Q ss_pred eeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 141 YQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 141 ~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
-.....+ +++++++...++.|..||.. ++.+.++... ....++...++++++++++.++.|..+|..+
T Consensus 128 --~~v~~~~-----~G~~lv~~~~~~~v~~~d~~----G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t 195 (276)
T 3no2_A 128 --RQINKNK-----KGNYLVPLFATSEVREIAPN----GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLES 195 (276)
T ss_dssp --SCCEECT-----TSCEEEEETTTTEEEEECTT----SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTT
T ss_pred --cCceECC-----CCCEEEEecCCCEEEEECCC----CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcC
Confidence 1113455 79999999999999999965 4666666653 3456677789999999998888999999887
Q ss_pred CC
Q psy3599 221 HE 222 (223)
Q Consensus 221 ~~ 222 (223)
++
T Consensus 196 G~ 197 (276)
T 3no2_A 196 NR 197 (276)
T ss_dssp CC
T ss_pred Cc
Confidence 75
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.32 E-value=5.3e-05 Score=59.31 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=79.6
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEe
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTG 162 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sg 162 (223)
...+.++.|+ +++.+++++..++ .+.+||..++.... .. ..+... +.. +++| ++.++++.
T Consensus 44 ~~~~~~~~~~-------~~g~l~~~~~~~~--~i~~~d~~~~~~~~-~~-~~~~~~---~~~i~~~~-----dg~l~v~~ 104 (333)
T 2dg1_A 44 GLQLEGLNFD-------RQGQLFLLDVFEG--NIFKINPETKEIKR-PF-VSHKAN---PAAIKIHK-----DGRLFVCY 104 (333)
T ss_dssp CCCEEEEEEC-------TTSCEEEEETTTC--EEEEECTTTCCEEE-EE-ECSSSS---EEEEEECT-----TSCEEEEE
T ss_pred CccccCcEEC-------CCCCEEEEECCCC--EEEEEeCCCCcEEE-Ee-eCCCCC---cceEEECC-----CCcEEEEe
Confidence 4567899999 8999888877777 78889988775433 22 133333 444 7888 78888877
Q ss_pred cCC----CcEEEEEcccCcccccceeec--ccccCEEEEEEecCCCEEEEEeC------CCcEEEeeCCC
Q psy3599 163 SED----SCVYFLDIQSKEHKNAVNKLQ--GHACPVLGVSFNYDESLLATSDY------QGLIILWSREK 220 (223)
Q Consensus 163 s~d----g~v~iwd~~~~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~------d~~i~iwd~~~ 220 (223)
..+ +.|.+||..+ +.....+. .+...+.++.++|++.++++... .+.|..+|..+
T Consensus 105 ~~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 105 LGDFKSTGGIFAATENG---DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp CTTSSSCCEEEEECTTS---CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCCCCceEEEEeCCC---CEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 666 6899999887 54432222 23457899999999998877653 24566666554
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.27 E-value=6.6e-05 Score=57.87 Aligned_cols=115 Identities=11% Similarity=0.094 Sum_probs=74.4
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcc-eeEE-EeeecCcccCCCcEEEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSK-YQVR-STFCPIMSFREGACVVT 161 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~-~~i~-~~~s~~~~~~~~~~l~s 161 (223)
...+.++.++ +++.++++...+. .+.+||..++.... ... ...... ..+. .+++| ++.++++
T Consensus 68 ~~~~~~l~~~-------~dg~l~v~~~~~~--~i~~~d~~~g~~~~-~~~-~~~~~~~~~~~~i~~d~-----~G~l~vt 131 (296)
T 3e5z_A 68 SHHQNGHCLN-------KQGHLIACSHGLR--RLERQREPGGEWES-IAD-SFEGKKLNSPNDVCLAP-----DGSLWFS 131 (296)
T ss_dssp CSSEEEEEEC-------TTCCEEEEETTTT--EEEEECSTTCCEEE-EEC-EETTEECCCCCCEEECT-----TSCEEEE
T ss_pred CCCcceeeEC-------CCCcEEEEecCCC--eEEEEcCCCCcEEE-Eee-ccCCCCCCCCCCEEECC-----CCCEEEE
Confidence 5678899999 8999888877666 68889987665332 111 111110 0022 35788 7888887
Q ss_pred ----ecC-------------CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 162 ----GSE-------------DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 162 ----gs~-------------dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
|+. .+.|+.++... + +..+..+......++|+|++..+++.+.++.|.+||+.
T Consensus 132 d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g----~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 132 DPTYGIDKPEEGYGGEMELPGRWVFRLAPDG----T-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp ECSHHHHCGGGSSCCCCCSSSCEEEEECTTS----C-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred CCccccccccccccccccCCCcEEEEECCCC----C-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 431 23444444322 2 33334455667899999999988777778999999986
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.25 E-value=5.8e-05 Score=65.68 Aligned_cols=120 Identities=10% Similarity=0.024 Sum_probs=74.6
Q ss_pred eeEEEEeecccccCCCCeEEEEEeCCC--------------eEEEEEecCCCceEEe-eeee-ccccCcceeEEEeeecC
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIAANA--------------VCILKVLDKEGAVQLK-RKFN-VNHKSSKYQVRSTFCPI 150 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~~~~--------------~~~v~i~d~~~~~~~~-~~~~-~~h~~~~~~i~~~~s~~ 150 (223)
+..++|+ |||+.|+.++.+. ...+.+|++.++.... ..+. ..|.... ....|+|
T Consensus 173 ~~~~~ws-------pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~--~~~~~Sp- 242 (710)
T 2xdw_A 173 FSCMAWT-------HDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWM--GGAELSD- 242 (710)
T ss_dssp SCCEEEC-------TTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCE--EEEEECT-
T ss_pred cceEEEE-------eCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEE--EEEEEcC-
Confidence 5678999 9999888777543 1237788887654110 1111 1233332 3447999
Q ss_pred cccCCCcEEEEecC-----CCcEEEEEcccCc----ccccceeecccccCEEEEEEecCCCEEEEEeCC----CcEEEee
Q psy3599 151 MSFREGACVVTGSE-----DSCVYFLDIQSKE----HKNAVNKLQGHACPVLGVSFNYDESLLATSDYQ----GLIILWS 217 (223)
Q Consensus 151 ~~~~~~~~l~sgs~-----dg~v~iwd~~~~~----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd 217 (223)
++.+|+.++. +..|++||+.+.. ....+..+..+...+.. .|+|+|..|+..+.. +.|.+||
T Consensus 243 ----Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 243 ----DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp ----TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred ----CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 7888877664 5689999987500 01135555556665554 488888877766543 3599999
Q ss_pred CCCC
Q psy3599 218 REKH 221 (223)
Q Consensus 218 ~~~~ 221 (223)
+.++
T Consensus 318 ~~~~ 321 (710)
T 2xdw_A 318 FTDP 321 (710)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8765
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.24 E-value=8.3e-05 Score=56.25 Aligned_cols=116 Identities=13% Similarity=0.044 Sum_probs=78.3
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
..+..+.++ +++.++++...++ .+.+++..+....... ......+ ...++++ ++.++++...
T Consensus 108 ~~p~~i~~~-------~~g~l~v~~~~~~--~i~~~~~~~~~~~~~~--~~~~~~p--~~i~~~~-----~g~l~v~~~~ 169 (270)
T 1rwi_B 108 NYPEGLAVD-------TQGAVYVADRGNN--RVVKLAAGSKTQTVLP--FTGLNDP--DGVAVDN-----SGNVYVTDTD 169 (270)
T ss_dssp SSEEEEEEC-------TTCCEEEEEGGGT--EEEEECTTCCSCEECC--CCSCCSC--CCEEECT-----TCCEEEEEGG
T ss_pred CCCcceEEC-------CCCCEEEEECCCC--EEEEEECCCceeEeec--cccCCCc--eeEEEeC-----CCCEEEEECC
Confidence 568899999 8888887766666 5666775544322211 1221221 2235777 6888888777
Q ss_pred CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
++.|.+||... .........+-..+.+++++++|.++++...++.|.+||....
T Consensus 170 ~~~i~~~~~~~---~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 170 NNRVVKLEAES---NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp GTEEEEECTTT---CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCEEEEEecCC---CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 88999999877 4433332333356889999999988888877889999998653
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.19 E-value=5.9e-05 Score=60.32 Aligned_cols=65 Identities=14% Similarity=0.267 Sum_probs=53.4
Q ss_pred eeecCcccCCCcEEEEecC-----------CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEE
Q psy3599 146 TFCPIMSFREGACVVTGSE-----------DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLII 214 (223)
Q Consensus 146 ~~s~~~~~~~~~~l~sgs~-----------dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~ 214 (223)
.|+| ++..++.... .+.|.+||..+ .+.+..+..+. +.+++|+|+|++|++++. ++|.
T Consensus 260 a~~~-----dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t---~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~ 328 (361)
T 2oiz_A 260 GLHR-----ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT---KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVN 328 (361)
T ss_dssp EEET-----TTTEEEEEEESSCCTTCTTCCCSEEEEEETTT---TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEE
T ss_pred EEec-----CCCeEEEEEccCCCcccccCCCceEEEEECCC---CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEE
Confidence 5777 5665555432 34799999999 88899988776 899999999999988886 9999
Q ss_pred EeeCCCC
Q psy3599 215 LWSREKH 221 (223)
Q Consensus 215 iwd~~~~ 221 (223)
+||..++
T Consensus 329 v~D~~t~ 335 (361)
T 2oiz_A 329 VYDISQP 335 (361)
T ss_dssp EEECSSS
T ss_pred EEECCCC
Confidence 9999887
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.19 E-value=2.7e-05 Score=66.19 Aligned_cols=105 Identities=10% Similarity=0.127 Sum_probs=78.3
Q ss_pred CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcc--cCccc
Q psy3599 102 DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQ--SKEHK 179 (223)
Q Consensus 102 ~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~--~~~~~ 179 (223)
.+.++++..+++ .+.++|..+++.+... ..+. .+ -...|+| ++.++++++.|+.|.+||+. + .
T Consensus 166 ~~~~~V~~~~~~--~V~viD~~t~~v~~~i-~~g~--~p--~~v~~Sp-----DGr~lyv~~~dg~V~viD~~~~t---~ 230 (567)
T 1qks_A 166 ENLFSVTLRDAG--QIALIDGSTYEIKTVL-DTGY--AV--HISRLSA-----SGRYLFVIGRDGKVNMIDLWMKE---P 230 (567)
T ss_dssp GGEEEEEETTTT--EEEEEETTTCCEEEEE-ECSS--CE--EEEEECT-----TSCEEEEEETTSEEEEEETTSSS---C
T ss_pred CceEEEEeCCCC--eEEEEECCCCeEEEEE-eCCC--Cc--cceEECC-----CCCEEEEEcCCCeEEEEECCCCC---C
Confidence 456677777788 8999999988766543 2232 21 2226999 89999999999999999996 6 6
Q ss_pred ccceeecccccCEEEEEEe----cCCCEEEEEe-CCCcEEEeeCCCCC
Q psy3599 180 NAVNKLQGHACPVLGVSFN----YDESLLATSD-YQGLIILWSREKHE 222 (223)
Q Consensus 180 ~~~~~~~~h~~~v~~v~~~----~~~~~l~s~s-~d~~i~iwd~~~~~ 222 (223)
+.+..+..... ...++|+ |+|.++++++ .++.+.++|..+.+
T Consensus 231 ~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 231 TTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp CEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred cEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 67777765433 5789999 6998877766 46999999987765
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.17 E-value=6e-05 Score=65.45 Aligned_cols=143 Identities=8% Similarity=-0.011 Sum_probs=85.6
Q ss_pred CcEEEEEECCCCceeeee------------eeeecC--------CCCe--eEEEEeecccccCCCCeEEEEEeCCC----
Q psy3599 60 GVIVSILCDDLGRLSKGK------------RLVLSQ--------DCPI--TCLSWRSWISREARDPTLLVNIAANA---- 113 (223)
Q Consensus 60 ~~i~~~~~~~~~~~~~~~------------~~~~~~--------~~~i--~~l~~~~~~~~~~~~~~~l~~~~~~~---- 113 (223)
..+...+|+|+|+.+... .+.... ...+ ..+.|+ +||+.|+.++.+.
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~ws-------pDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWT-------PDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEEC-------TTSSEEEEEECCCCTTS
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEe-------cCCCEEEEEEecCCCCC
Confidence 357788899988876511 111110 1112 678999 9999888877544
Q ss_pred -------eEEEEEecCCCceE---EeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCC----cEEEEEcccCccc
Q psy3599 114 -------VCILKVLDKEGAVQ---LKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDS----CVYFLDIQSKEHK 179 (223)
Q Consensus 114 -------~~~v~i~d~~~~~~---~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg----~v~iwd~~~~~~~ 179 (223)
...+.+|++.++.. +.... ..+.... ....|+| ++.+|+.++.++ .|++|+... +
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~-~~~~~~~--~~~~~Sp-----DG~~l~~~~~~~~~~~~l~~~~~~~---~ 262 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHER-TGDPTTF--LQSDLSR-----DGKYLFVYILRGWSENDVYWKRPGE---K 262 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECC-CCCTTCE--EEEEECT-----TSCCEEEEEEETTTEEEEEEECTTC---S
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEec-CCCCEEE--EEEEECC-----CCCEEEEEEeCCCCceEEEEEcCCC---C
Confidence 12388888876641 21111 1233332 3337999 788887777665 677776554 4
Q ss_pred ccceeecccccCEEEEEEecCCCEEEEEe---CCCcEEEeeCCCCC
Q psy3599 180 NAVNKLQGHACPVLGVSFNYDESLLATSD---YQGLIILWSREKHE 222 (223)
Q Consensus 180 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~s---~d~~i~iwd~~~~~ 222 (223)
+ ...+..+...+....+ +++.+++++. .++.|.+||+.+++
T Consensus 263 ~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 263 D-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp S-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred c-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 3 3444445555666666 5555555544 35789999987653
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.16 E-value=2.7e-05 Score=61.26 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=68.6
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCC---CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEE
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAAN---AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVT 161 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~s 161 (223)
..+..+.|+ |||..|+..+.+ +...+.+++..++.... .. .+.. . ....|+| ++..|+.
T Consensus 59 ~~~~~~~~S-------pDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~-l~--~~~~-~--~~~~wsp-----dg~~l~~ 120 (347)
T 2gop_A 59 ENATMPRIS-------PDGKKIAFMRANEEKKVSEIWVADLETLSSKK-IL--EAKN-I--RSLEWNE-----DSRKLLI 120 (347)
T ss_dssp ESCEEEEEC-------TTSSEEEEEEEETTTTEEEEEEEETTTTEEEE-EE--EESE-E--EEEEECT-----TSSEEEE
T ss_pred ccCCCeEEC-------CCCCEEEEEEeccCCCcceEEEEECCCCceEE-EE--cCCC-c--cceeECC-----CCCEEEE
Confidence 357789999 999988876632 33356777887775433 21 2211 2 3337999 7887777
Q ss_pred ecCC---------------------------CcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCC
Q psy3599 162 GSED---------------------------SCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQ 210 (223)
Q Consensus 162 gs~d---------------------------g~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d 210 (223)
++.+ ..|++||+.+ ++.+..+.. . .+..+.|+|+| ++++++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~---~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 121 VGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES---EEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp EEECCCC---------CCCC---------CEEEEEEEETTT---TEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred EEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC---CeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 6632 4689999988 665344444 3 68899999999 77777654
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.14 E-value=1.7e-05 Score=64.07 Aligned_cols=112 Identities=13% Similarity=0.156 Sum_probs=76.0
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceE--------EeeeeeccccCcceeEEEeeecCcccCCC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQ--------LKRKFNVNHKSSKYQVRSTFCPIMSFREG 156 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~--------~~~~~~~~h~~~~~~i~~~~s~~~~~~~~ 156 (223)
.+++.++++ +...++++++.+++ .+|+++.... ........+.. + ...+| ++
T Consensus 38 ~~~nlLais-------~~~gll~a~~~~~l---~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V--~~l~f-------d~ 97 (388)
T 1xip_A 38 ASLQNLDIS-------NSKSLFVAASGSKA---VVGELQLLRDHITSDSTPLTFKWEKEIPD-V--IFVCF-------HG 97 (388)
T ss_dssp SCCBCEEEE-------TTTTEEEEEETTEE---EEEEHHHHHHHHHSSSCCCCCSEEEECTT-E--EEEEE-------ET
T ss_pred ccccEEEEc-------CCCCEEEEeCCCEE---EEEEhhHhhhhhccccccccceEEeeCCC-e--eEEEE-------CC
Confidence 368999999 88899999988873 4465432210 00000012323 3 33356 37
Q ss_pred cEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+|+.+ .++.|++||+++ .........|+..+.++.+.+. .+++++.||.+.+||++.+.
T Consensus 98 ~~L~v~-~~~~l~v~dv~s---l~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 98 DQVLVS-TRNALYSLDLEE---LSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp TEEEEE-ESSEEEEEESSS---TTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred CEEEEE-cCCcEEEEEchh---hhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCc
Confidence 888888 889999999988 5544556667778888776543 38888999999999998653
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.13 E-value=0.00078 Score=51.35 Aligned_cols=112 Identities=11% Similarity=0.024 Sum_probs=76.2
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEe
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTG 162 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sg 162 (223)
...+..+.+. +++.++++...+. .+..+|. ++....... ...... ... .+.+ ++.++++.
T Consensus 98 ~~~~~~i~~~-------~~g~l~v~~~~~~--~i~~~d~-~g~~~~~~~-~~~~~~---~~~i~~~~-----~g~l~v~~ 158 (299)
T 2z2n_A 98 DSAPYGITEG-------PNGDIWFTEMNGN--RIGRITD-DGKIREYEL-PNKGSY---PSFITLGS-----DNALWFTE 158 (299)
T ss_dssp TCCEEEEEEC-------TTSCEEEEETTTT--EEEEECT-TCCEEEEEC-SSTTCC---EEEEEECT-----TSCEEEEE
T ss_pred CCCceeeEEC-------CCCCEEEEecCCc--eEEEECC-CCCEEEecC-CCCCCC---CceEEEcC-----CCCEEEEe
Confidence 4467888888 8888888776666 6777787 443332111 122222 333 6777 68888877
Q ss_pred cCCCcEEEEEcccCccccccee-ecccccCEEEEEEecCCCEEEEEeCCCcEEEeeC
Q psy3599 163 SEDSCVYFLDIQSKEHKNAVNK-LQGHACPVLGVSFNYDESLLATSDYQGLIILWSR 218 (223)
Q Consensus 163 s~dg~v~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 218 (223)
..++.|..||. + ++.... +..+...+.++++++++.+.++...++.|..||.
T Consensus 159 ~~~~~i~~~~~-~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 159 NQNNAIGRITE-S---GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp TTTTEEEEECT-T---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CCCCEEEEEcC-C---CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 77889999998 5 443322 3333456889999999998877767888999987
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.12 E-value=0.00092 Score=50.94 Aligned_cols=113 Identities=16% Similarity=0.127 Sum_probs=75.7
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
...+.++.++ +++.++++...++ .+..|+.... ...... ......+ ....+.+ ++.++++..
T Consensus 56 ~~~~~~i~~~-------~~g~l~v~~~~~~--~i~~~~~~g~-~~~~~~-~~~~~~~--~~i~~~~-----~g~l~v~~~ 117 (299)
T 2z2n_A 56 DAKVMCLTIS-------SDGEVWFTENAAN--KIGRITKKGI-IKEYTL-PNPDSAP--YGITEGP-----NGDIWFTEM 117 (299)
T ss_dssp TCCEEEEEEC-------TTSCEEEEETTTT--EEEEECTTSC-EEEEEC-SSTTCCE--EEEEECT-----TSCEEEEET
T ss_pred cCceeeEEEC-------CCCCEEEeCCCCC--eEEEECCCCc-EEEEeC-CCcCCCc--eeeEECC-----CCCEEEEec
Confidence 4578889998 8888888776566 5677787632 211111 1122222 3336777 688888877
Q ss_pred CCCcEEEEEcccCcccccce-eecccccCEEEEEEecCCCEEEEEeCCCcEEEeeC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVN-KLQGHACPVLGVSFNYDESLLATSDYQGLIILWSR 218 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 218 (223)
.++.|..||. . ++... ....+...+..+++.+++.++++...++.|..||.
T Consensus 118 ~~~~i~~~d~-~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 118 NGNRIGRITD-D---GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp TTTEEEEECT-T---CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCceEEEECC-C---CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 7889999998 4 33222 22334456899999999998887777788999987
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.10 E-value=5e-06 Score=66.50 Aligned_cols=116 Identities=9% Similarity=-0.083 Sum_probs=74.3
Q ss_pred eeEEEEeecccccCCCCeEEEEEeCC-CeEEEEEecCCCceEEeeeeeccccCcceeEE-EeeecCcccCCCcEEEEecC
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIAAN-AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVR-STFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~-~~~s~~~~~~~~~~l~sgs~ 164 (223)
+..++|+ |+|++|+..... +...+.++|..++..... . .+.... .. ..|+| ++..|+..+.
T Consensus 38 ~~~~~~S-------pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l-~--~~~~~~--~~~~~~sp-----dg~~l~~~~~ 100 (396)
T 3c5m_A 38 FYQKCFT-------QDGKKLLFAGDFDGNRNYYLLNLETQQAVQL-T--EGKGDN--TFGGFIST-----DERAFFYVKN 100 (396)
T ss_dssp TTSCCBC-------TTSCEEEEEECTTSSCEEEEEETTTTEEEEC-C--CSSCBC--TTTCEECT-----TSSEEEEEET
T ss_pred eecCcCC-------CCCCEEEEEEecCCCceEEEEECCCCcEEEe-e--cCCCCc--cccceECC-----CCCEEEEEEc
Confidence 6788999 999988766532 222567788887754332 1 222221 22 25899 8999999999
Q ss_pred CCcEEEEEcccCcccccceeecccccCEEE-------------------EEEecCCCEEEEE-----eCCCcEEEeeCCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKLQGHACPVLG-------------------VSFNYDESLLATS-----DYQGLIILWSREK 220 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~l~s~-----s~d~~i~iwd~~~ 220 (223)
++.|++||+.+ ++.......+...... +.|+|++..++.+ ..+..|.+||+.+
T Consensus 101 ~~~l~~~d~~~---~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~ 177 (396)
T 3c5m_A 101 ELNLMKVDLET---LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIET 177 (396)
T ss_dssp TTEEEEEETTT---CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTT
T ss_pred CCcEEEEECCC---CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCC
Confidence 98999999988 6544444433332222 3456666655543 3566789999877
Q ss_pred CC
Q psy3599 221 HE 222 (223)
Q Consensus 221 ~~ 222 (223)
++
T Consensus 178 g~ 179 (396)
T 3c5m_A 178 GE 179 (396)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.04 E-value=0.00026 Score=54.48 Aligned_cols=113 Identities=9% Similarity=0.008 Sum_probs=73.7
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCC-CceE-E-eeeeeccccCcceeEEEeeecCcccCCCcEEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKE-GAVQ-L-KRKFNVNHKSSKYQVRSTFCPIMSFREGACVV 160 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~-~~~~-~-~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~ 160 (223)
......++|+ +++.+|++.+.+. .+.+|+.. ++.. . ...+ ..+...+ -..++.+ ++.+++
T Consensus 171 ~~~~~gi~~s-------~dg~~lv~~~~~~--~i~~~~~~~~g~~~~~~~~~-~~~~~~p--~~i~~d~-----~G~l~v 233 (296)
T 3e5z_A 171 RVKPNGLAFL-------PSGNLLVSDTGDN--ATHRYCLNARGETEYQGVHF-TVEPGKT--DGLRVDA-----GGLIWA 233 (296)
T ss_dssp CSSEEEEEEC-------TTSCEEEEETTTT--EEEEEEECSSSCEEEEEEEE-CCSSSCC--CSEEEBT-----TSCEEE
T ss_pred CCCCccEEEC-------CCCCEEEEeCCCC--eEEEEEECCCCcCcCCCeEe-eCCCCCC--CeEEECC-----CCCEEE
Confidence 3456789999 9998886666666 67788875 3432 1 1122 1222222 1225777 688777
Q ss_pred EecCCCcEEEEEcccCcccccceeecccccCEEEEEE-ecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 161 TGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSF-NYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 161 sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~-~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
+. ++.|.+||... +.+..+..+.. +.+++| .|++..|..++.++ +.-++.++.
T Consensus 234 ~~--~~~v~~~~~~g----~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 234 SA--GDGVHVLTPDG----DELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EE--TTEEEEECTTS----CEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred Ec--CCeEEEECCCC----CEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 66 78899999754 56667766666 889999 58888888887654 444455543
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.98 E-value=0.00024 Score=60.34 Aligned_cols=117 Identities=7% Similarity=0.048 Sum_probs=78.3
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCC--CceEEeeeeeccccCcceeEEEeee----cCcccCCCc
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKE--GAVQLKRKFNVNHKSSKYQVRSTFC----PIMSFREGA 157 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~--~~~~~~~~~~~~h~~~~~~i~~~~s----~~~~~~~~~ 157 (223)
+..+..+.|+ +|++++.+++.++ .+.++|+. ++..+... ..+. .+ ....|+ | +++
T Consensus 196 g~~p~~v~~S-------pDGr~lyv~~~dg--~V~viD~~~~t~~~v~~i-~~G~--~P--~~ia~s~~~~p-----DGk 256 (567)
T 1qks_A 196 GYAVHISRLS-------ASGRYLFVIGRDG--KVNMIDLWMKEPTTVAEI-KIGS--EA--RSIETSKMEGW-----EDK 256 (567)
T ss_dssp SSCEEEEEEC-------TTSCEEEEEETTS--EEEEEETTSSSCCEEEEE-ECCS--EE--EEEEECCSTTC-----TTT
T ss_pred CCCccceEEC-------CCCCEEEEEcCCC--eEEEEECCCCCCcEeEEE-ecCC--CC--ceeEEccccCC-----CCC
Confidence 4567799999 9999999888888 78889985 66555432 2222 22 444788 6 687
Q ss_pred EEEEecC-CCcEEEEEcccCcccccceeecc----------c--------------------------------------
Q psy3599 158 CVVTGSE-DSCVYFLDIQSKEHKNAVNKLQG----------H-------------------------------------- 188 (223)
Q Consensus 158 ~l~sgs~-dg~v~iwd~~~~~~~~~~~~~~~----------h-------------------------------------- 188 (223)
+++.++. ++.+.++|..+ .+.+..+.. |
T Consensus 257 ~l~v~n~~~~~v~ViD~~t---~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~ 333 (567)
T 1qks_A 257 YAIAGAYWPPQYVIMDGET---LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL 333 (567)
T ss_dssp EEEEEEEETTEEEEEETTT---CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE
T ss_pred EEEEEEccCCeEEEEECCC---CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc
Confidence 7776665 58899999877 555443321 0
Q ss_pred -------ccCEEEEEEecCCCEEEEEe-CCCcEEEeeCCCCC
Q psy3599 189 -------ACPVLGVSFNYDESLLATSD-YQGLIILWSREKHE 222 (223)
Q Consensus 189 -------~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~ 222 (223)
.....++.|+|++.++++++ .++.|.++|+.+++
T Consensus 334 ~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 334 KTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp EEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred eeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 01223567888888766554 57888899987754
No 195
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.96 E-value=0.00013 Score=58.28 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=57.1
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCccc--ccceeecccccCEE
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHK--NAVNKLQGHACPVL 193 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~--~~~~~~~~h~~~v~ 193 (223)
.+.+||..+++.+... . .+. + ....|+| ++++|++++. +.|.+||..+ + +.+..+..+.....
T Consensus 287 ~v~viD~~t~~~v~~i-~-~~~--p--~~ia~sp-----dg~~l~v~n~-~~v~v~D~~t---~~l~~~~~i~~~G~~P~ 351 (361)
T 2oiz_A 287 EIWVMDTKTKQRVARI-P-GRD--A--LSMTIDQ-----QRNLMLTLDG-GNVNVYDISQ---PEPKLLRTIEGAAEASL 351 (361)
T ss_dssp EEEEEETTTTEEEEEE-E-CTT--C--CEEEEET-----TTTEEEEECS-SCEEEEECSS---SSCEEEEEETTSCSSEE
T ss_pred eEEEEECCCCcEEEEE-e-cCC--e--eEEEECC-----CCCEEEEeCC-CeEEEEECCC---CcceeeEEeccCCCCcE
Confidence 6889999999776643 3 333 3 5557999 7888888886 9999999999 8 88888766666778
Q ss_pred EEEEecCCC
Q psy3599 194 GVSFNYDES 202 (223)
Q Consensus 194 ~v~~~~~~~ 202 (223)
.+.++|+|.
T Consensus 352 ~~~~~p~G~ 360 (361)
T 2oiz_A 352 QVQFHPVGG 360 (361)
T ss_dssp EEEECCCSC
T ss_pred EEEecCCCC
Confidence 899999875
No 196
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.96 E-value=5.9e-05 Score=60.17 Aligned_cols=117 Identities=9% Similarity=0.111 Sum_probs=71.0
Q ss_pred CCCeeEEEEeecccccCC-CCeEEEEEeCCCe----EEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCc
Q psy3599 84 DCPITCLSWRSWISREAR-DPTLLVNIAANAV----CILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGA 157 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~----~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~ 157 (223)
...+..+.|+ | ++..|+..+.+.. ..+.+++..++.. ... ..+... ..+.. .|+| ++.
T Consensus 187 ~~~~~~~~~s-------p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l--~~~~~~-~~~~~~~~sp-----dg~ 250 (396)
T 3c5m_A 187 TAWLGHPIYR-------PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKI--KEHAEG-ESCTHEFWIP-----DGS 250 (396)
T ss_dssp SSCEEEEEEE-------TTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EES--SCCCTT-EEEEEEEECT-----TSS
T ss_pred CcccccceEC-------CCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEe--eccCCC-ccccceEECC-----CCC
Confidence 5567889999 7 7887776554321 1456677765532 222 122211 11444 7999 788
Q ss_pred EEEEecCC-----CcEEEEEcccCcccccceeecccccCEEEEEEec-CCCEEEEEe----------------CCCcEEE
Q psy3599 158 CVVTGSED-----SCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNY-DESLLATSD----------------YQGLIIL 215 (223)
Q Consensus 158 ~l~sgs~d-----g~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s----------------~d~~i~i 215 (223)
.|+..+.+ +.|++||+.+ ++...... ... .. +.|+| ++..+++++ .+..|.+
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~---g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~ 324 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPET---LENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV 324 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTT---CCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred EEEEEecCCCCccceEEEEECCC---CCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence 66665443 4499999987 54322211 111 23 88999 999888754 3478999
Q ss_pred eeCCCCC
Q psy3599 216 WSREKHE 222 (223)
Q Consensus 216 wd~~~~~ 222 (223)
||+.+++
T Consensus 325 ~d~~~~~ 331 (396)
T 3c5m_A 325 LNTKAKS 331 (396)
T ss_dssp EETTTTB
T ss_pred EecccCc
Confidence 9987654
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.91 E-value=0.00037 Score=54.75 Aligned_cols=115 Identities=11% Similarity=0.094 Sum_probs=76.9
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCC----------CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAAN----------AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFR 154 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~----------~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~ 154 (223)
.....+.++ +++++++++..+ . .+.++|..+++.... +.......+ ...+++|
T Consensus 172 ~~p~~i~~~-------~dG~l~v~~~~~~~~~~~~~~~~--~v~~id~~t~~v~~~-~~~~~g~~p--~~la~~~----- 234 (328)
T 3dsm_A 172 IQPTSLVMD-------KYNKMWTITDGGYEGSPYGYEAP--SLYRIDAETFTVEKQ-FKFKLGDWP--SEVQLNG----- 234 (328)
T ss_dssp SCBCCCEEC-------TTSEEEEEBCCBCTTCSSCBCCC--EEEEEETTTTEEEEE-EECCTTCCC--EEEEECT-----
T ss_pred CCccceEEc-------CCCCEEEEECCCccCCccccCCc--eEEEEECCCCeEEEE-EecCCCCCc--eeEEEec-----
Confidence 345678888 889988776643 5 678889888865543 221111222 4447898
Q ss_pred CCcEEEEecCCCcEEEEEcccCcccccce--eecccccCEEEEEEec-CCCEEEEE----eCCCcEEEeeCCCCC
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHKNAVN--KLQGHACPVLGVSFNY-DESLLATS----DYQGLIILWSREKHE 222 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~--~~~~h~~~v~~v~~~~-~~~~l~s~----s~d~~i~iwd~~~~~ 222 (223)
++..++.+.. .|++||..+ ++... .+.........++++| ++.++++. ..++.|.+||.. ++
T Consensus 235 d~~~lyv~~~--~v~~~d~~t---~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 235 TRDTLYWINN--DIWRMPVEA---DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp TSCEEEEESS--SEEEEETTC---SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred CCCEEEEEcc--EEEEEECCC---CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 6777776654 899999987 55432 1222235678999999 56777776 678899999987 43
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.90 E-value=0.0039 Score=47.39 Aligned_cols=113 Identities=13% Similarity=0.023 Sum_probs=75.5
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEe
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTG 162 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sg 162 (223)
...+..+.+. +++.++++...++ .+..+|.. +........ ..... ... .+.+ ++.++++.
T Consensus 61 ~~~~~~i~~~-------~~g~l~v~~~~~~--~v~~~d~~-g~~~~~~~~-~~~~~---~~~i~~~~-----~g~l~v~~ 121 (300)
T 2qc5_A 61 DAKVMCLIVS-------SLGDIWFTENGAN--KIGKLSKK-GGFTEYPLP-QPDSG---PYGITEGL-----NGDIWFTQ 121 (300)
T ss_dssp TCCEEEEEEC-------TTSCEEEEETTTT--EEEEECTT-SCEEEEECS-STTCC---EEEEEECS-----TTCEEEEE
T ss_pred CCcceeEEEC-------CCCCEEEEecCCC--eEEEECCC-CCeEEecCC-CCCCC---CccceECC-----CCCEEEEc
Confidence 3578889998 8888888776566 67778877 433221111 12222 333 6777 68888887
Q ss_pred cCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeC
Q psy3599 163 SEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSR 218 (223)
Q Consensus 163 s~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 218 (223)
..++.|..+|... ......+......+.++.+.+++++.++...++.|..||.
T Consensus 122 ~~~~~i~~~~~~g---~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 122 LNGDRIGKLTADG---TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp TTTTEEEEECTTS---CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred cCCCeEEEECCCC---CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 7788899988764 2222223333456889999999997777766788998887
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.89 E-value=0.0023 Score=49.21 Aligned_cols=107 Identities=10% Similarity=0.060 Sum_probs=69.6
Q ss_pred CCCeEE-EEEeCCCeEEEEEecCC-CceE----Eeeeeecccc-CcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEc
Q psy3599 101 RDPTLL-VNIAANAVCILKVLDKE-GAVQ----LKRKFNVNHK-SSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDI 173 (223)
Q Consensus 101 ~~~~~l-~~~~~~~~~~v~i~d~~-~~~~----~~~~~~~~h~-~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~ 173 (223)
+++..| ++...+. .+.+|+.. ++.. ....+. ++. ..+ ...++++ ++.++++...++.|.+||.
T Consensus 185 ~dg~~l~v~~~~~~--~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p--~~i~~d~-----~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 185 GRPYQLIVAETPTK--KLWSYDIKGPAKIENKKVWGHIP-GTHEGGA--DGMDFDE-----DNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp SCEEEEEEEETTTT--EEEEEEEEETTEEEEEEEEEECC-CCSSCEE--EEEEEBT-----TCCEEEEEETTTEEEEECT
T ss_pred CCCCEEEEEECCCC--eEEEEECCCCCccccceEEEECC-CCCCCCC--CceEECC-----CCCEEEEEcCCCEEEEEcC
Confidence 456444 4444555 56777765 3321 111111 221 221 3336777 7888888777889999999
Q ss_pred ccCcccccceeecccccCEEEEEEecCCC-EEEEEeCCCcEEEeeCCC
Q psy3599 174 QSKEHKNAVNKLQGHACPVLGVSFNYDES-LLATSDYQGLIILWSREK 220 (223)
Q Consensus 174 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~ 220 (223)
.+ ++.+..+..+...+.+++++|+++ ++++...++.|..|++..
T Consensus 255 ~~---g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 255 DG---GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TC---BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CC---CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 87 666666666667899999999998 555555678899999764
No 200
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.85 E-value=0.00024 Score=61.74 Aligned_cols=119 Identities=16% Similarity=0.165 Sum_probs=76.0
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeC-CC--eEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAA-NA--VCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVV 160 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~-~~--~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~ 160 (223)
...+..+.|| |||++|+-+.+ ++ ...++++|+.+++.+...+. +... ....|+ . ++.|+
T Consensus 128 ~~~l~~~~~S-------pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~k~----~~~~Ws-D-----g~~l~ 189 (693)
T 3iuj_A 128 TTALDQLSFS-------RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK-DVKF----SGISWL-G-----NEGFF 189 (693)
T ss_dssp CCEEEEEEEC-------TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE-EEES----CCCEEE-T-----TTEEE
T ss_pred cEEEEEEEEC-------CCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC-Ccee----ccEEEe-C-----CCEEE
Confidence 3468889999 99998885432 22 24789999999876543221 1100 011466 4 66666
Q ss_pred EecCCC-------------cEEEEEcccCccc--ccceeecc-cccCEEEEEEecCCCEEEEEe----CCCcEEEeeCCC
Q psy3599 161 TGSEDS-------------CVYFLDIQSKEHK--NAVNKLQG-HACPVLGVSFNYDESLLATSD----YQGLIILWSREK 220 (223)
Q Consensus 161 sgs~dg-------------~v~iwd~~~~~~~--~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s----~d~~i~iwd~~~ 220 (223)
.++.+. .|++|++.+.. . .++..... |......+.|+|+|..|+... .+..|+++|+.+
T Consensus 190 y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~-~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 190 YSSYDKPDGSELSARTDQHKVYFHRLGTAQ-EDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp EEESSCCC-------CCCCEEEEEETTSCG-GGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred EEEecCcccccccccCCCcEEEEEECCCCc-ccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 666663 39999988711 1 23444444 556678899999999775443 235799999876
Q ss_pred C
Q psy3599 221 H 221 (223)
Q Consensus 221 ~ 221 (223)
+
T Consensus 269 ~ 269 (693)
T 3iuj_A 269 E 269 (693)
T ss_dssp T
T ss_pred C
Confidence 5
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.81 E-value=0.00087 Score=51.65 Aligned_cols=115 Identities=10% Similarity=0.098 Sum_probs=73.9
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCC---------------CeEEEEEecCCCceEEeeeeeccccCcceeEEEeee--
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAAN---------------AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFC-- 148 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~---------------~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s-- 148 (223)
.+.++.++ +++.++++...+ . .+..++.. +.... .. .+.... -..+++
T Consensus 118 ~~~~i~~d-------~~g~l~v~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~-g~~~~-~~--~~~~~~--~~i~~~~~ 182 (314)
T 1pjx_A 118 GCNDCAFD-------YEGNLWITAPAGEVAPADYTRSMQEKFG--SIYCFTTD-GQMIQ-VD--TAFQFP--NGIAVRHM 182 (314)
T ss_dssp CCCEEEEC-------TTSCEEEEECBCBCTTSCCCBTTSSSCE--EEEEECTT-SCEEE-EE--EEESSE--EEEEEEEC
T ss_pred CCcCEEEC-------CCCCEEEEecCcccccccccccccCCCC--eEEEECCC-CCEEE-ec--cCCCCc--ceEEEecc
Confidence 47889998 888888776643 3 45556665 43222 11 222221 222677
Q ss_pred --cCcccCCCc-EEEEecCCCcEEEEEcccCcccc-----cceeecccc-cCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 149 --PIMSFREGA-CVVTGSEDSCVYFLDIQSKEHKN-----AVNKLQGHA-CPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 149 --~~~~~~~~~-~l~sgs~dg~v~iwd~~~~~~~~-----~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
| ++. ++++...++.|.+||.... +. ....+..+. ..+..++++++|+++++...++.|..||..
T Consensus 183 ~d~-----dg~~l~v~~~~~~~i~~~~~~~~--g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 183 NDG-----RPYQLIVAETPTKKLWSYDIKGP--AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp TTS-----CEEEEEEEETTTTEEEEEEEEET--TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred cCC-----CCCEEEEEECCCCeEEEEECCCC--CccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 7 665 4555567889999997620 22 233344443 557889999999998888788899999987
Q ss_pred CCC
Q psy3599 220 KHE 222 (223)
Q Consensus 220 ~~~ 222 (223)
+++
T Consensus 256 ~g~ 258 (314)
T 1pjx_A 256 GGQ 258 (314)
T ss_dssp CBS
T ss_pred CCc
Confidence 543
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.81 E-value=0.00066 Score=55.20 Aligned_cols=114 Identities=10% Similarity=0.011 Sum_probs=76.8
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
.....++|+ +++.++++...+. .++.||..++.... ... . .... . .+|+| ++..|+.+..
T Consensus 131 ~~P~~la~d-------~~g~lyv~d~~~~--~I~~id~~~g~~~~-~~~-~-~~~~--~-ia~~~-----~g~~l~~~d~ 190 (409)
T 3hrp_A 131 KYMWGIAAV-------GNNTVLAYQRDDP--RVRLISVDDNKVTT-VHP-G-FKGG--K-PAVTK-----DKQRVYSIGW 190 (409)
T ss_dssp CCEEEEEEC-------STTEEEEEETTTT--EEEEEETTTTEEEE-EEE-T-CCBC--B-CEECT-----TSSEEEEEBS
T ss_pred CCceEEEEe-------CCCCEEEEecCCC--cEEEEECCCCEEEE-eec-c-CCCC--c-eeEec-----CCCcEEEEec
Confidence 467789999 8999888877777 78899998775432 221 2 1221 2 46888 6888888777
Q ss_pred CC--cEEEEEcccCcccccceee---cc-cccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 165 DS--CVYFLDIQSKEHKNAVNKL---QG-HACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 165 dg--~v~iwd~~~~~~~~~~~~~---~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
++ .|++++... ......+ .. ....+.+++++|++..|..+..++.|+.||..++
T Consensus 191 ~~~~~I~~~d~~~---~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 191 EGTHTVYVYMKAS---GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp STTCEEEEEEGGG---TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC
T ss_pred CCCceEEEEEcCC---CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC
Confidence 65 788888776 4332333 12 3455788999995444444667889999998754
No 203
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.80 E-value=2.1e-06 Score=69.00 Aligned_cols=134 Identities=13% Similarity=0.152 Sum_probs=60.5
Q ss_pred cCCcEEEEEECC-CCceeeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccc
Q psy3599 58 STGVIVSILCDD-LGRLSKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNH 136 (223)
Q Consensus 58 ~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h 136 (223)
.++.|. .+|. +|+.+-.. . ..++.+..+. .++.++++++.++ .+..||..+++.+... . .+
T Consensus 17 ~dg~v~--a~d~~tG~~~W~~----~-~~~~~s~p~~-------~~g~~~v~~s~dg--~l~a~d~~tG~~~w~~-~-~~ 78 (369)
T 2hz6_A 17 LDGSLH--AVSKRTGSIKWTL----K-EDPVLQVPTH-------VEEPAFLPDPNDG--SLYTLGSKNNEGLTKL-P-FT 78 (369)
T ss_dssp TTSEEE--EEETTTCCEEEEE----E-CCCSCCCC------------CCEEECTTTC--CEEEC-----CCSEEC-S-CC
T ss_pred CCCEEE--EEECCCCCEEEEe----c-CCCceecceE-------cCCCEEEEeCCCC--EEEEEECCCCceeeee-e-cc
Confidence 346566 4443 66655322 1 1344444444 5666777767777 6888998877654432 1 22
Q ss_pred cCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEe
Q psy3599 137 KSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILW 216 (223)
Q Consensus 137 ~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 216 (223)
.... +. .+|.. ..+..+++|+.|+.++.||..+ ++.+..+..+. ...++|++..+++++.|+.|+.|
T Consensus 79 ~~~~--~~--~sp~~--~~~~~v~~g~~dg~v~a~D~~t---G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~ 145 (369)
T 2hz6_A 79 IPEL--VQ--ASPCR--SSDGILYMGKKQDIWYVIDLLT---GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMY 145 (369)
T ss_dssp HHHH--HT--TCSCC-------CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECC
T ss_pred Cccc--cc--cCceE--ecCCEEEEEeCCCEEEEEECCC---CcEEEEecCCC----cccccccCCEEEEEecCCEEEEE
Confidence 1111 11 12210 0355778888999999999999 88877776543 23456788889999999999999
Q ss_pred eCCCCC
Q psy3599 217 SREKHE 222 (223)
Q Consensus 217 d~~~~~ 222 (223)
|.++++
T Consensus 146 d~~tG~ 151 (369)
T 2hz6_A 146 DTKTRE 151 (369)
T ss_dssp CSSSSS
T ss_pred ECCCCC
Confidence 998876
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.79 E-value=0.0006 Score=59.64 Aligned_cols=115 Identities=11% Similarity=0.012 Sum_probs=69.0
Q ss_pred eEEEEeecccccCCCCeEEEEEeCCC------------eEEEEEecCCCceEEe-eeee-ccccCcceeEEEeeecCccc
Q psy3599 88 TCLSWRSWISREARDPTLLVNIAANA------------VCILKVLDKEGAVQLK-RKFN-VNHKSSKYQVRSTFCPIMSF 153 (223)
Q Consensus 88 ~~l~~~~~~~~~~~~~~~l~~~~~~~------------~~~v~i~d~~~~~~~~-~~~~-~~h~~~~~~i~~~~s~~~~~ 153 (223)
..+.|+ +| +.|+.++.+. ...+.+|++.++.... ..+. ..+.... ....|+|
T Consensus 212 ~~~~ws-------pD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~--~~~~~Sp---- 277 (741)
T 1yr2_A 212 SGLAWL-------GN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG--HGASVSS---- 277 (741)
T ss_dssp CCCEES-------TT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE--EEEEECT----
T ss_pred ccEEEE-------CC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE--EEEEECC----
Confidence 467788 88 7777665432 1146778876553110 1111 1222222 3447999
Q ss_pred CCCcEEEEecCCC-----cEEEEEcccCccc--ccceeecccccCEEEEEEecCCCEEEEEeC----CCcEEEeeCCCC
Q psy3599 154 REGACVVTGSEDS-----CVYFLDIQSKEHK--NAVNKLQGHACPVLGVSFNYDESLLATSDY----QGLIILWSREKH 221 (223)
Q Consensus 154 ~~~~~l~sgs~dg-----~v~iwd~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~----d~~i~iwd~~~~ 221 (223)
++.+|+..+.++ .|++||+.+ + ++...+..+...+.... +|++..|+..+. ++.|.+||+.++
T Consensus 278 -DG~~l~~~~~~~~~~~~~l~~~d~~~---~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 278 -DGRWVVITSSEGTDPVNTVHVARVTN---GKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp -TSCEEEEEEECTTCSCCEEEEEEEET---TEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred -CCCEEEEEEEccCCCcceEEEEECCC---CCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 788887766543 799999987 5 32455555555555543 488888877764 345999998763
No 205
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.79 E-value=0.00057 Score=53.72 Aligned_cols=117 Identities=8% Similarity=-0.024 Sum_probs=79.2
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeecccc----CcceeEEEeeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHK----SSKYQVRSTFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~----~~~~~i~~~~s~~~~~~~~~~l 159 (223)
......++++ +++.++++...++ .+.++|..++..... +..+.. ..+ ...++ . ++.++
T Consensus 83 ~~~p~~i~~~-------~~g~lyv~~~~~~--~v~~iD~~t~~~~~~-i~~g~~~~~~~~p--~~i~~-~-----~~~ly 144 (328)
T 3dsm_A 83 FTSPRYIHFL-------SDEKAYVTQIWDY--RIFIINPKTYEITGY-IECPDMDMESGST--EQMVQ-Y-----GKYVY 144 (328)
T ss_dssp CSSEEEEEEE-------ETTEEEEEEBSCS--EEEEEETTTTEEEEE-EECTTCCTTTCBC--CCEEE-E-----TTEEE
T ss_pred CCCCcEEEEe-------CCCeEEEEECCCC--eEEEEECCCCeEEEE-EEcCCccccCCCc--ceEEE-E-----CCEEE
Confidence 5678899998 7787666664666 788899998865543 222320 021 11233 2 46666
Q ss_pred EEec-CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCC----------CcEEEeeCCCCC
Q psy3599 160 VTGS-EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQ----------GLIILWSREKHE 222 (223)
Q Consensus 160 ~sgs-~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----------~~i~iwd~~~~~ 222 (223)
++.. .++.|.++|..+ ++.+..+... .....+.++|+|.+++++..+ +.|.++|..+++
T Consensus 145 v~~~~~~~~v~viD~~t---~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~ 214 (328)
T 3dsm_A 145 VNCWSYQNRILKIDTET---DKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT 214 (328)
T ss_dssp EEECTTCCEEEEEETTT---TEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE
T ss_pred EEcCCCCCEEEEEECCC---CeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe
Confidence 6654 488999999998 7777666543 235678899999987777654 789999987653
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.75 E-value=0.0015 Score=50.39 Aligned_cols=115 Identities=13% Similarity=0.036 Sum_probs=70.9
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCC----------CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCC
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAAN----------AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFRE 155 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~----------~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~ 155 (223)
.+.++.++ ++|.++++.... .. .+..++.. +.. .... ...... -..+|+| +
T Consensus 99 ~~~di~~d-------~dG~l~~~~~~~~~~~~~~~~~~~-~l~~~d~~-g~~-~~~~--~~~~~p--ngi~~sp-----d 159 (297)
T 3g4e_A 99 RFNDGKVD-------PAGRYFAGTMAEETAPAVLERHQG-ALYSLFPD-HHV-KKYF--DQVDIS--NGLDWSL-----D 159 (297)
T ss_dssp EEEEEEEC-------TTSCEEEEEEECCSBTTBCCTTCE-EEEEECTT-SCE-EEEE--EEESBE--EEEEECT-----T
T ss_pred CCCCEEEC-------CCCCEEEecCCcccccccccCCCc-EEEEEECC-CCE-EEEe--eccccc--cceEEcC-----C
Confidence 46778888 889877765321 11 22233443 222 1111 222221 2237898 6
Q ss_pred Cc-EEEEecCCCcEEEEEcc--cCcccc-----cceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 156 GA-CVVTGSEDSCVYFLDIQ--SKEHKN-----AVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 156 ~~-~l~sgs~dg~v~iwd~~--~~~~~~-----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++ ++++.+.++.|.+||+. + +. .+..+..+......+++.++|++.++...++.|..||..+++
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~---G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQT---GQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTT---CCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred CCEEEEecCCCCcEEEEeccCCC---CcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 76 45667778899999974 3 32 233333344567889999999988888778889999987664
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.74 E-value=0.0024 Score=49.38 Aligned_cols=114 Identities=15% Similarity=0.066 Sum_probs=70.2
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeee--cccc-CcceeEEEeeecCcccCCCcEEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFN--VNHK-SSKYQVRSTFCPIMSFREGACVV 160 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~--~~h~-~~~~~i~~~~s~~~~~~~~~~l~ 160 (223)
...+..+.++ ++|.++++...+. .+..++.+ +... .... .+.. ..+ -...+.| ++.+++
T Consensus 85 ~~~~~gl~~d-------~dG~l~v~~~~~~--~v~~~~~~-g~~~-~~~~~~~~~~~~~~--~~i~~d~-----dG~l~~ 146 (305)
T 3dr2_A 85 TAFTNGNAVD-------AQQRLVHCEHGRR--AITRSDAD-GQAH-LLVGRYAGKRLNSP--NDLIVAR-----DGAIWF 146 (305)
T ss_dssp CSCEEEEEEC-------TTSCEEEEETTTT--EEEEECTT-SCEE-EEECEETTEECSCC--CCEEECT-----TSCEEE
T ss_pred CCccceeeEC-------CCCCEEEEECCCC--EEEEECCC-CCEE-EEEeccCCCccCCC--CCEEECC-----CCCEEE
Confidence 5568889999 8999777765555 57777876 3321 1110 0111 111 1125777 788888
Q ss_pred E----ecC-------------CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCC------CcEEEee
Q psy3599 161 T----GSE-------------DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQ------GLIILWS 217 (223)
Q Consensus 161 s----gs~-------------dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd 217 (223)
+ |.. .+.|+.+|..+ ++..... .-.....++|+|++..|..+... +.|..||
T Consensus 147 td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~---g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~ 221 (305)
T 3dr2_A 147 TDPPFGLRKPSQGCPADPELAHHSVYRLPPDG---SPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFA 221 (305)
T ss_dssp ECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS---CCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEE
T ss_pred eCcCCCccccccccccccccCCCeEEEEcCCC---CcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEE
Confidence 6 442 24577777765 4433222 33456889999999977776654 6899998
Q ss_pred CCC
Q psy3599 218 REK 220 (223)
Q Consensus 218 ~~~ 220 (223)
+..
T Consensus 222 ~~~ 224 (305)
T 3dr2_A 222 WRD 224 (305)
T ss_dssp EET
T ss_pred ecC
Confidence 753
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.70 E-value=0.0035 Score=47.70 Aligned_cols=114 Identities=11% Similarity=0.000 Sum_probs=76.9
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEe
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTG 162 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sg 162 (223)
...+.++.+. +++.+.++...++ .+.++|.. +........ ..... ... .+.+ ++.++++.
T Consensus 19 ~~~p~~i~~d-------~~g~l~v~~~~~~--~v~~~~~~-~~~~~~~~~-~~~~~---~~~i~~~~-----~g~l~v~~ 79 (300)
T 2qc5_A 19 DSGPYGITSS-------EDGKVWFTQHKAN--KISSLDQS-GRIKEFEVP-TPDAK---VMCLIVSS-----LGDIWFTE 79 (300)
T ss_dssp TCCEEEEEEC-------TTSCEEEEETTTT--EEEEECTT-SCEEEEECS-STTCC---EEEEEECT-----TSCEEEEE
T ss_pred CCCcceeeEC-------CCCCEEEEcCCCC--eEEEECCC-CceEEEECC-CCCCc---ceeEEECC-----CCCEEEEe
Confidence 4578899998 8898888776666 67788877 543321111 22222 333 6777 68888877
Q ss_pred cCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 163 SEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 163 s~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
..++.|..+|... ......+......+.++++.+++.++++...++.|..||..
T Consensus 80 ~~~~~v~~~d~~g---~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 80 NGANKIGKLSKKG---GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp TTTTEEEEECTTS---CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred cCCCeEEEECCCC---CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 7788899998764 22222223234568999999999988887767889888865
No 209
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.65 E-value=8.3e-06 Score=65.53 Aligned_cols=105 Identities=14% Similarity=0.098 Sum_probs=58.2
Q ss_pred CCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccc
Q psy3599 101 RDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKN 180 (223)
Q Consensus 101 ~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~ 180 (223)
-++..|++++.++ .+..||..+|+.+... . . ... ....+.. ++..+++++.||.|+.||..+ ++
T Consensus 7 v~~~~v~~gs~dg--~v~a~d~~tG~~~W~~-~-~--~~~--~s~p~~~-----~g~~~v~~s~dg~l~a~d~~t---G~ 70 (369)
T 2hz6_A 7 LPETLLFVSTLDG--SLHAVSKRTGSIKWTL-K-E--DPV--LQVPTHV-----EEPAFLPDPNDGSLYTLGSKN---NE 70 (369)
T ss_dssp -CTTEEEEEETTS--EEEEEETTTCCEEEEE-E-C--CCS--CCCC----------CCEEECTTTCCEEEC--------C
T ss_pred eeCCEEEEEcCCC--EEEEEECCCCCEEEEe-c-C--CCc--eecceEc-----CCCEEEEeCCCCEEEEEECCC---Cc
Confidence 4567777888888 7889999999877643 2 2 222 2222333 566888889999999999988 77
Q ss_pred cceeeccccc-CEE-EEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 181 AVNKLQGHAC-PVL-GVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 181 ~~~~~~~h~~-~v~-~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+..+..+.. .+. +.... .+..+++++.|+.++.||.++|+
T Consensus 71 ~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 71 GLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp CSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---
T ss_pred eeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCc
Confidence 6655543321 110 00111 34567778889999999998876
No 210
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.61 E-value=0.00069 Score=53.06 Aligned_cols=104 Identities=15% Similarity=0.192 Sum_probs=65.2
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCC-------eEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcE
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANA-------VCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGAC 158 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~-------~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~ 158 (223)
.+..+.|+ +++ +++++..+. ...+.++| ++. ..... .+ .. +.. ++| ++..
T Consensus 172 ~~~~~~~s-------pdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~--~~-~~---~~~-~sp-----dg~~ 228 (347)
T 2gop_A 172 RFSSGIWH-------RDK-IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMF--EK-VS---FYA-VDS-----DGER 228 (347)
T ss_dssp TTCEEEEE-------TTE-EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEE--EE-ES---EEE-EEE-----CSSC
T ss_pred CcccccCC-------CCe-EEEEEecccccccccccccEEEeC--CCc-eEEec--cC-cc---eee-ECC-----CCCE
Confidence 45577888 888 766665321 11333445 443 22221 23 22 322 377 7887
Q ss_pred EEEecCC--------CcEEEEEcccCcccccceeecccccCEEE-EEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 159 VVTGSED--------SCVYFLDIQSKEHKNAVNKLQGHACPVLG-VSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 159 l~sgs~d--------g~v~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
|+.++.+ ..|++|| + ++.......|...+.. +.|+ ++ ++++++.++.++|| +.+
T Consensus 229 l~~~~~~~~~~~~~~~~l~~~d--~---~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 229 ILLYGKPEKKYMSEHNKLYIYD--G---KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp EEEEECCSSSCCCSSCEEEEEC--S---SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred EEEEEccccCCccccceEEEEC--C---CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 7766644 3688888 5 5544445556677886 8999 88 88999999999999 753
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.60 E-value=0.0072 Score=46.52 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=66.2
Q ss_pred eeEEEEeecccccCCCCeEEE-EEeCCCeEEEEEecC--CCceEEe-eeee-c-cccCcceeEEEeeecCcccCCCcEEE
Q psy3599 87 ITCLSWRSWISREARDPTLLV-NIAANAVCILKVLDK--EGAVQLK-RKFN-V-NHKSSKYQVRSTFCPIMSFREGACVV 160 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~-~~~~~~~~~v~i~d~--~~~~~~~-~~~~-~-~h~~~~~~i~~~~s~~~~~~~~~~l~ 160 (223)
...++|+ ++++.|. +.+.+. .+.+|+. .++.... ..+. . .+...+ -..++.+ ++.+.+
T Consensus 151 pngi~~s-------pdg~~lyv~~~~~~--~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p--~g~~~d~-----~G~lwv 214 (297)
T 3g4e_A 151 SNGLDWS-------LDHKIFYYIDSLSY--SVDAFDYDLQTGQISNRRSVYKLEKEEQIP--DGMCIDA-----EGKLWV 214 (297)
T ss_dssp EEEEEEC-------TTSCEEEEEEGGGT--EEEEEEECTTTCCEEEEEEEEECCGGGCEE--EEEEEBT-----TSCEEE
T ss_pred ccceEEc-------CCCCEEEEecCCCC--cEEEEeccCCCCcccCcEEEEECCCCCCCC--CeeEECC-----CCCEEE
Confidence 4568888 8887554 545555 5666765 4443211 1111 1 111221 2226777 788888
Q ss_pred EecCCCcEEEEEcccCcccccceeecccccCEEEEEEe-cCCCEEEEEe
Q psy3599 161 TGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFN-YDESLLATSD 208 (223)
Q Consensus 161 sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~s 208 (223)
+....+.|..||..+ ++.+..+..+...+++++|. |++..|..++
T Consensus 215 a~~~~~~v~~~d~~t---G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVT---GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEETTTEEEEECTTT---CCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EEcCCCEEEEEcCCC---ceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 887788899999998 88888888776789999998 8876554433
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.56 E-value=0.00045 Score=55.72 Aligned_cols=106 Identities=11% Similarity=0.022 Sum_probs=74.0
Q ss_pred CCCeEEEEEeC-----CCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec----------CC
Q psy3599 101 RDPTLLVNIAA-----NAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS----------ED 165 (223)
Q Consensus 101 ~~~~~l~~~~~-----~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs----------~d 165 (223)
|++..+..... +. .+.+.|..+++.+... ..+... ...++| +++.++.++ .+
T Consensus 42 pd~~~vyV~~~~~~~~~~--~V~ViD~~t~~v~~~I-~vG~~P-----~va~sp-----DG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVT--QQFVIDGEAGRVIGMI-DGGFLP-----NPVVAD-----DGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCTTEEEEEECGGGCSSE--EEEEEETTTTEEEEEE-EECSSC-----EEEECT-----TSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCEEEEEcCcccCCCC--EEEEEECCCCeEEEEE-ECCCCC-----cEEECC-----CCCEEEEEcccccccccCCCC
Confidence 77766665543 44 7888899988776643 324332 146899 787776654 35
Q ss_pred CcEEEEEcccCcccccceeecccc-------cCEEEEEEecCCCEEEEEeC--CCcEEEeeCCCCC
Q psy3599 166 SCVYFLDIQSKEHKNAVNKLQGHA-------CPVLGVSFNYDESLLATSDY--QGLIILWSREKHE 222 (223)
Q Consensus 166 g~v~iwd~~~~~~~~~~~~~~~h~-------~~v~~v~~~~~~~~l~s~s~--d~~i~iwd~~~~~ 222 (223)
+.|.+||..+ .+.+..+.... .....+.++|+|.++..++. ++.|.++|+.+++
T Consensus 109 ~~VsviD~~t---~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 109 DYVEVFDPVT---LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp EEEEEECTTT---CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred CEEEEEECCC---CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc
Confidence 7899999999 77777664211 13456899999998887763 6899999998764
No 213
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.48 E-value=0.0036 Score=47.78 Aligned_cols=113 Identities=8% Similarity=0.012 Sum_probs=74.8
Q ss_pred eeEEEEeecccccCCCCeEEEEEeC--CCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIAA--NAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
...+.|+ +++.++++.+. +. .+++.|+.+++.+.... .+..... ....+. ++.+.++.-.
T Consensus 23 ~~Gl~~~-------~dg~Lyvstg~~~~s--~v~~iD~~tg~v~~~i~-l~~~~fg--eGi~~~------g~~lyv~t~~ 84 (266)
T 2iwa_A 23 TQGLVYA-------ENDTLFESTGLYGRS--SVRQVALQTGKVENIHK-MDDSYFG--EGLTLL------NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEC-------STTEEEEEECSTTTC--EEEEEETTTCCEEEEEE-CCTTCCE--EEEEEE------TTEEEEEETT
T ss_pred cccEEEe-------CCCeEEEECCCCCCC--EEEEEECCCCCEEEEEe-cCCCcce--EEEEEe------CCEEEEEEec
Confidence 5789999 77777777653 45 78889999998776532 1222121 222232 2456666667
Q ss_pred CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++.+.++|..+ .+.+..+......- ..+++++..+..+..++.|.++|..+.+
T Consensus 85 ~~~v~viD~~t---~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 85 KNIGFIYDRRT---LSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp CSEEEEEETTT---TEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred CCEEEEEECCC---CcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCc
Confidence 88999999998 88888775321111 3355677766666678999999988754
No 214
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.45 E-value=0.0042 Score=53.88 Aligned_cols=53 Identities=13% Similarity=0.203 Sum_probs=41.9
Q ss_pred CcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 166 SCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 166 g~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|.|..||+.+ ++.+-.++ +..++....+...+..++.++.||.+++||.++++
T Consensus 457 g~l~A~D~~t---G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 457 GRLLAWDPVA---QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EEEEEEETTT---TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cEEEEEeCCC---CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 7799999999 88776665 33344555566778888889999999999999886
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.39 E-value=0.0047 Score=49.53 Aligned_cols=107 Identities=12% Similarity=-0.037 Sum_probs=70.1
Q ss_pred CCCeEEEEEeC---CCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec----------CCCc
Q psy3599 101 RDPTLLVNIAA---NAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS----------EDSC 167 (223)
Q Consensus 101 ~~~~~l~~~~~---~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs----------~dg~ 167 (223)
+++..+..+.. +.+..+.++|..+++.+.. ++.+... ...++| +++.++.+. .++.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~-i~~g~~p-----~i~~sp-----Dg~~lyv~n~~~~~~~rg~~~~~ 98 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH-VNGGFLP-----NPVAAH-----SGSEFALASTSFSRIAKGKRTDY 98 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEE-ecCCCCC-----CeEECC-----CCCEEEEEeccccccccCCCCCe
Confidence 55655554432 2111567889888876543 3323222 225899 788887775 3678
Q ss_pred EEEEEcccCcccccceeeccc-------ccCEEEEEEecCCCEEEEEeC--CCcEEEeeCCCCC
Q psy3599 168 VYFLDIQSKEHKNAVNKLQGH-------ACPVLGVSFNYDESLLATSDY--QGLIILWSREKHE 222 (223)
Q Consensus 168 v~iwd~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--d~~i~iwd~~~~~ 222 (223)
|.+||..+ .+.+..+... ......+.|+|+|.+|..++. ++.|.++| .+++
T Consensus 99 v~viD~~t---~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 99 VEVFDPVT---FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred EEEEECCC---CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC
Confidence 99999988 6666655321 122457899999999988874 57899999 8765
No 216
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.31 E-value=0.0085 Score=52.08 Aligned_cols=54 Identities=13% Similarity=0.116 Sum_probs=42.4
Q ss_pred CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|.|+.||+.+ ++.+-.++.+. .+....+...+.+++.++.||.++.||.++++
T Consensus 454 ~g~l~A~D~~t---G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 454 SGKLIAWDPVK---QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEETTT---TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ceeEEEEECCC---CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 37799999999 88777776443 23334556678889999999999999999986
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.27 E-value=0.0089 Score=48.52 Aligned_cols=118 Identities=8% Similarity=0.028 Sum_probs=75.1
Q ss_pred CCCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCceEEee-ee-eccccCcceeE-EEeeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAVQLKR-KF-NVNHKSSKYQV-RSTFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~~~~~-~~-~~~h~~~~~~i-~~~~s~~~~~~~~~~l 159 (223)
...+.+++++ + ++.+++ +..++ .+..||..++..... .. ..++.... +. ..+|+|. ++.++
T Consensus 218 ~~~p~~iav~-------p~~g~lyv-~d~~~--~I~~~d~~~~~~~~~~~~~~~g~~~~~-P~~~ia~~p~----~g~ly 282 (409)
T 3hrp_A 218 SGKIGAVALD-------ETEEWLYF-VDSNK--NFGRFNVKTQEVTLIKQLELSGSLGTN-PGPYLIYYFV----DSNFY 282 (409)
T ss_dssp CSCCCBCEEC-------TTSSEEEE-ECTTC--EEEEEETTTCCEEEEEECCCCSCCCCS-SCCEEEEETT----TTEEE
T ss_pred cCCcEEEEEe-------CCCCeEEE-EECCC--cEEEEECCCCCEEEEecccccCCCCCC-ccccEEEeCC----CCEEE
Confidence 4566788888 6 666666 55566 677888876643221 00 11222111 02 4468884 47777
Q ss_pred EEecCCCcEEEEEcccCcccccceeeccc---------------ccCEEEEEEecCCCEEEEEe-CCCcEEEeeCCCC
Q psy3599 160 VTGSEDSCVYFLDIQSKEHKNAVNKLQGH---------------ACPVLGVSFNYDESLLATSD-YQGLIILWSREKH 221 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~h---------------~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~ 221 (223)
++-...+.|+.|+... . +..+.++ -.....++++++|+++++-+ .++.|+.||+.++
T Consensus 283 v~d~~~~~I~~~~~~g---~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDG---E--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp EEETTTTEEEEECTTC---C--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred EEeCCCCEEEEEecCC---C--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 8877888999998765 2 2222222 13478999999999888877 8899999996554
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.16 E-value=0.026 Score=44.37 Aligned_cols=115 Identities=12% Similarity=0.027 Sum_probs=70.8
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeC-----CCeEEEEEecCCCceEEeeeeecc-----ccCcceeEEEeeecCccc
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAA-----NAVCILKVLDKEGAVQLKRKFNVN-----HKSSKYQVRSTFCPIMSF 153 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~i~d~~~~~~~~~~~~~~-----h~~~~~~i~~~~s~~~~~ 153 (223)
...+..+.++ +++.++++-.. +. .+.+||+.+++.+... ... +.... -..++++.
T Consensus 66 ~~~p~gv~~d-------~~g~L~v~D~g~~~~~~~--~i~~~d~~tg~~~~~~-~~~~~~~~~~~~~--~~v~vd~~--- 130 (343)
T 2qe8_A 66 FDTVLGIKSD-------GNGIVWMLDNGNQSKSVP--KLVAWDTLNNQLSRVI-YLPPPITLSNSFV--NDLAVDLI--- 130 (343)
T ss_dssp CSCEEEEEEC-------SSSEEEEEECHHHHTSCC--EEEEEETTTTEEEEEE-ECCTTTSCTTCCC--CEEEEETT---
T ss_pred eeEeeEEEEc-------CCCcEEEEcCCCCcCCCC--eEEEEECCCCeEEEEE-ECChhhccccccc--ceEEEecC---
Confidence 4578899999 88887776543 34 6778899888644432 111 11111 22257762
Q ss_pred CCCcEEEEec---CCCcEEEEEcccCcccccceeeccc-----------------------------ccCEEEEEEecCC
Q psy3599 154 REGACVVTGS---EDSCVYFLDIQSKEHKNAVNKLQGH-----------------------------ACPVLGVSFNYDE 201 (223)
Q Consensus 154 ~~~~~l~sgs---~dg~v~iwd~~~~~~~~~~~~~~~h-----------------------------~~~v~~v~~~~~~ 201 (223)
++..+++-. .++.|.+||..+ ++....+.+| ...+..++|+|++
T Consensus 131 -~g~~yvtd~~~~~~~~i~v~d~~~---g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg 206 (343)
T 2qe8_A 131 -HNFVYISDPAPDDKAALIRVDLQT---GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN 206 (343)
T ss_dssp -TTEEEEEECCSGGGCEEEEEETTT---CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS
T ss_pred -CCEEEEEcCccCCCCeEEEEECCC---CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC
Confidence 355556655 678899999886 4443333221 1236889999999
Q ss_pred CEEEEEeCCC-cEEEee
Q psy3599 202 SLLATSDYQG-LIILWS 217 (223)
Q Consensus 202 ~~l~s~s~d~-~i~iwd 217 (223)
..|..+..++ .+..++
T Consensus 207 ~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 207 EWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp CEEEEEESSCSEEEEEE
T ss_pred CEEEEEeCCCCeEEEEE
Confidence 9888877665 344333
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.15 E-value=0.057 Score=42.08 Aligned_cols=101 Identities=15% Similarity=0.041 Sum_probs=61.6
Q ss_pred eeEEEEeecccccCCCCeEEEEE-eCCCeEEEEEecCC--Cc-eEEe-eeee-c-cccCcceeEEE-eeecCcccCCCcE
Q psy3599 87 ITCLSWRSWISREARDPTLLVNI-AANAVCILKVLDKE--GA-VQLK-RKFN-V-NHKSSKYQVRS-TFCPIMSFREGAC 158 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~-~~~~~~~v~i~d~~--~~-~~~~-~~~~-~-~h~~~~~~i~~-~~s~~~~~~~~~~ 158 (223)
...++|+ ++++.|..+ +.++ .+.+|+.. ++ .... ..+. . ..... ... .+.+ ++.+
T Consensus 181 ~~~i~~s-------~dg~~lyv~~~~~~--~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~---p~gi~~d~-----~G~l 243 (326)
T 2ghs_A 181 PNSICFS-------PDGTTGYFVDTKVN--RLMRVPLDARTGLPTGKAEVFIDSTGIKGG---MDGSVCDA-----EGHI 243 (326)
T ss_dssp EEEEEEC-------TTSCEEEEEETTTC--EEEEEEBCTTTCCBSSCCEEEEECTTSSSE---EEEEEECT-----TSCE
T ss_pred cCCeEEc-------CCCCEEEEEECCCC--EEEEEEcccccCCcccCceEEEECCCCCCC---CCeeEECC-----CCCE
Confidence 4567888 888765544 4455 67777764 44 2100 1110 1 11122 233 5666 6887
Q ss_pred EEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEe-cCCCEEEEEe
Q psy3599 159 VVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFN-YDESLLATSD 208 (223)
Q Consensus 159 l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~s 208 (223)
.++...++.|.+||. . ++.+..+..+...+.+++|. +++..|..++
T Consensus 244 wva~~~~~~v~~~d~-~---g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 244 WNARWGEGAVDRYDT-D---GNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEEETTTEEEEECT-T---CCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEEEeCCCEEEEECC-C---CCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 777766788999997 4 55666666666679999998 8877654443
No 220
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.14 E-value=0.016 Score=44.11 Aligned_cols=110 Identities=9% Similarity=-0.018 Sum_probs=74.8
Q ss_pred eeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCC
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDS 166 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg 166 (223)
...+.|+ . +.++++++.++ .++.+|+++++.+...+ ...... .-.... ++.+.+..-.++
T Consensus 57 tqGL~~~-------~-~~Ly~stG~~g--~v~~iD~~Tgkv~~~~l--~~~~Fg--eGit~~------g~~Ly~ltw~~~ 116 (268)
T 3nok_A 57 TQGLVFH-------Q-GHFFESTGHQG--TLRQLSLESAQPVWMER--LGNIFA--EGLASD------GERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE-------T-TEEEEEETTTT--EEEECCSSCSSCSEEEE--CTTCCE--EEEEEC------SSCEEEEESSSC
T ss_pred cceEEEE-------C-CEEEEEcCCCC--EEEEEECCCCcEEeEEC--CCCcce--eEEEEe------CCEEEEEEccCC
Confidence 4678887 3 67777888888 68999999997776542 221111 112232 355666666788
Q ss_pred cEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 167 CVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+.++|..+ .+.+.++..... -+.++ +++..|..+..++.|.++|..+.+
T Consensus 117 ~v~V~D~~T---l~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 117 LLFTWSGMP---PQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp EEEEEETTT---TEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCC
T ss_pred EEEEEECCc---CcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCe
Confidence 999999999 888888874322 23444 567777777678999999988754
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.10 E-value=0.045 Score=43.77 Aligned_cols=107 Identities=9% Similarity=-0.055 Sum_probs=70.0
Q ss_pred EEEEeecccccCCCCeEEEEEe----------CCCeEEEEEecCCCceEEeeeeecc-c-----cCcceeEEEeeecCcc
Q psy3599 89 CLSWRSWISREARDPTLLVNIA----------ANAVCILKVLDKEGAVQLKRKFNVN-H-----KSSKYQVRSTFCPIMS 152 (223)
Q Consensus 89 ~l~~~~~~~~~~~~~~~l~~~~----------~~~~~~v~i~d~~~~~~~~~~~~~~-h-----~~~~~~i~~~~s~~~~ 152 (223)
.+.++ ||+++|..+. .+. .+.++|..+.+.+...- .+ . ...+ -...++|
T Consensus 70 ~i~~s-------pDg~~lyv~n~~~~~~~rg~~~~--~v~viD~~t~~~~~~i~-~~~~~~~~~g~~p--~~~~~sp--- 134 (373)
T 2mad_H 70 NPVAA-------HSGSEFALASTSFSRIAKGKRTD--YVEVFDPVTFLPIADIE-LPDAPRFDVGPYS--WMNANTP--- 134 (373)
T ss_pred CeEEC-------CCCCEEEEEeccccccccCCCCC--eEEEEECCCCcEEEEEE-CCCccccccCCCc--cceEECC---
Confidence 99999 9998888764 234 57888988775554321 12 0 0111 2336899
Q ss_pred cCCCcEEEEecC--CCcEEEEEcccCccccccee-ecccccCEEEEEEecCC-CEEEEEeCCCcEEEeeCCCC
Q psy3599 153 FREGACVVTGSE--DSCVYFLDIQSKEHKNAVNK-LQGHACPVLGVSFNYDE-SLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 153 ~~~~~~l~sgs~--dg~v~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~ 221 (223)
++++|+.++. ++.|.++| .+ ++.+.. +... . ++.+.|++ ..+++.+.||.+.++|. ++
T Consensus 135 --DG~~l~v~n~~~~~~v~viD-~t---~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 135 --NNADLLFFQFAAGPAVGLVV-QG---GSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred --CCCEEEEEecCCCCeEEEEE-CC---CCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 7988888764 47899999 88 777666 5422 1 24445554 45566677888888887 54
No 222
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.10 E-value=0.027 Score=42.31 Aligned_cols=115 Identities=13% Similarity=0.042 Sum_probs=74.2
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
.-...+.|+ . +.++.+++..+-..++.+|+.+++.+...- ....... .-.... ++.+....-.
T Consensus 21 ~ftqGL~~~-------~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~~~fg--eGi~~~------~~~ly~ltw~ 83 (243)
T 3mbr_X 21 AFTEGLFYL-------R-GHLYESTGETGRSSVRKVDLETGRILQRAE-VPPPYFG--AGIVAW------RDRLIQLTWR 83 (243)
T ss_dssp CCEEEEEEE-------T-TEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCTTCCE--EEEEEE------TTEEEEEESS
T ss_pred cccccEEEE-------C-CEEEEECCCCCCceEEEEECCCCCEEEEEe-CCCCcce--eEEEEe------CCEEEEEEee
Confidence 345678998 5 677777775422278888999997776532 1221111 222222 3556666667
Q ss_pred CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++.+.++|..+ .+.+.++..... -+.++ +++..|..+..++.|.++|..+.+
T Consensus 84 ~~~v~v~D~~t---l~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 84 NHEGFVYDLAT---LTPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp SSEEEEEETTT---TEEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCC
T ss_pred CCEEEEEECCc---CcEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCe
Confidence 88999999999 888888874332 24444 566666666668899999988754
No 223
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.06 E-value=0.019 Score=43.57 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=72.4
Q ss_pred eeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCC
Q psy3599 87 ITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDS 166 (223)
Q Consensus 87 i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg 166 (223)
...+.|+ ++.++.+++.++-..++.+|+.+++.+.... .+..... .- ..+. ++.+.+..-.++
T Consensus 45 tqGL~~~--------~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~~~Fg--eG--it~~----g~~ly~ltw~~~ 107 (262)
T 3nol_A 45 TEGFFYR--------NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LGKRYFG--EG--ISDW----KDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEE--------TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CCTTCCE--EE--EEEE----TTEEEEEESSSS
T ss_pred cceEEEE--------CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cCCccce--eE--EEEe----CCEEEEEEeeCC
Confidence 3678887 4577777776543478889999998776532 2221111 21 2231 345555555688
Q ss_pred cEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 167 CVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+.++|..+ .+.+.++..... -+.+ ++++..|..+..++.|.++|..+.+
T Consensus 108 ~v~v~D~~t---~~~~~ti~~~~e-G~gl--t~dg~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 108 LGFVWNIRN---LRQVRSFNYDGE-GWGL--THNDQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp EEEEEETTT---CCEEEEEECSSC-CCCE--EECSSCEEECCSSSEEEEECTTTCS
T ss_pred EEEEEECcc---CcEEEEEECCCC-ceEE--ecCCCEEEEECCCCeEEEEcCCCCe
Confidence 999999999 888888764322 2333 4566766666667889999988754
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.03 E-value=0.012 Score=47.32 Aligned_cols=109 Identities=10% Similarity=0.046 Sum_probs=69.5
Q ss_pred EEEEeecccccCCCCeEEEEEe----------CCCeEEEEEecCCCceEEeeeeeccc--c----CcceeEEEeeecCcc
Q psy3599 89 CLSWRSWISREARDPTLLVNIA----------ANAVCILKVLDKEGAVQLKRKFNVNH--K----SSKYQVRSTFCPIMS 152 (223)
Q Consensus 89 ~l~~~~~~~~~~~~~~~l~~~~----------~~~~~~v~i~d~~~~~~~~~~~~~~h--~----~~~~~i~~~~s~~~~ 152 (223)
.+.++ ||++++..+. .+. .+.+||..+.+.+.... .+. . ..+ -...++|
T Consensus 82 ~va~s-------pDG~~lyVan~~~~r~~~G~~~~--~VsviD~~t~~v~~~I~-v~~g~r~~~g~~P--~~~a~sp--- 146 (386)
T 3sjl_D 82 NPVVA-------DDGSFIAHASTVFSRIARGERTD--YVEVFDPVTLLPTADIE-LPDAPRFLVGTYP--WMTSLTP--- 146 (386)
T ss_dssp EEEEC-------TTSSCEEEEEEEEEETTEEEEEE--EEEEECTTTCCEEEEEE-ETTCCCCCBSCCG--GGEEECT---
T ss_pred cEEEC-------CCCCEEEEEcccccccccCCCCC--EEEEEECCCCeEEEEEE-CCCccccccCCCC--ceEEEcC---
Confidence 49999 9998776654 234 68999999887665432 121 0 111 2235899
Q ss_pred cCCCcEEEEecC--CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 153 FREGACVVTGSE--DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 153 ~~~~~~l~sgs~--dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
++++++.+.. ++.|.++|+.+ ++.+..+.... + ...+......+++.+.||++.+.++.+
T Consensus 147 --DGk~lyVan~~~~~~VsVID~~t---~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 147 --DGKTLLFYQFSPAPAVGVVDLEG---KAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp --TSSEEEEEECSSSCEEEEEETTT---TEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred --CCCEEEEEEcCCCCeEEEEECCC---CcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCC
Confidence 7888877764 68999999999 88877775321 1 122222334555666677777766654
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.03 E-value=0.003 Score=51.64 Aligned_cols=106 Identities=11% Similarity=0.018 Sum_probs=72.1
Q ss_pred CCCeEEEEEe-CC----CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec----------CC
Q psy3599 101 RDPTLLVNIA-AN----AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS----------ED 165 (223)
Q Consensus 101 ~~~~~l~~~~-~~----~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs----------~d 165 (223)
+++..+..+. .. + .+.++|..+++.+... ..+... ...++| +++.++.+. .+
T Consensus 82 ~~~~~vyV~n~~~~~~~~--~VsVID~~t~~vv~~I-~vG~~P-----gia~Sp-----Dgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAIT--QQFVIDGSTGRILGMT-DGGFLP-----HPVAAE-----DGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCTTEEEEEECTTTCSSE--EEEEEETTTTEEEEEE-EECSSC-----EEEECT-----TSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCEEEEECCCcCCCCC--eEEEEECCCCEEEEEE-ECCCCC-----ceEECC-----CCCEEEEEeccccccccCCCC
Confidence 5555444433 22 4 7888999998776643 334432 235899 677776665 36
Q ss_pred CcEEEEEcccCcccccceeeccc-------ccCEEEEEEecCCCEEEEEeC--CCcEEEeeCCCCC
Q psy3599 166 SCVYFLDIQSKEHKNAVNKLQGH-------ACPVLGVSFNYDESLLATSDY--QGLIILWSREKHE 222 (223)
Q Consensus 166 g~v~iwd~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--d~~i~iwd~~~~~ 222 (223)
+.|.++|..+ .+.+..+.-. ......+.++|+|.++..++. ++.|.+.|+.+.+
T Consensus 149 ~~VsviD~~t---~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 149 DYVEVFDPVT---FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp EEEEEECTTT---CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred CEEEEEECCC---CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 7899999998 7777666421 122346789999998888764 5789999998754
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.89 E-value=0.057 Score=42.08 Aligned_cols=111 Identities=9% Similarity=0.048 Sum_probs=67.0
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCC-----CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEE-
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAAN-----AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACV- 159 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l- 159 (223)
.+.++.++ ++|.++++...+ .. .+..++ ++.. .... ...... -..+|+| +++.+
T Consensus 135 ~~~~i~~d-------~~G~l~v~~~~~~~~~~~~-~l~~~~--~g~~-~~~~--~~~~~~--~~i~~s~-----dg~~ly 194 (326)
T 2ghs_A 135 RSNDGRMH-------PSGALWIGTMGRKAETGAG-SIYHVA--KGKV-TKLF--ADISIP--NSICFSP-----DGTTGY 194 (326)
T ss_dssp EEEEEEEC-------TTSCEEEEEEETTCCTTCE-EEEEEE--TTEE-EEEE--EEESSE--EEEEECT-----TSCEEE
T ss_pred CCCCEEEC-------CCCCEEEEeCCCcCCCCce-EEEEEe--CCcE-EEee--CCCccc--CCeEEcC-----CCCEEE
Confidence 46788898 888877765421 11 233334 3432 2111 221221 2236888 67654
Q ss_pred EEecCCCcEEEEEcc--cCccc-cc-----ceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCC
Q psy3599 160 VTGSEDSCVYFLDIQ--SKEHK-NA-----VNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~--~~~~~-~~-----~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~ 219 (223)
++.+.++.|.+||+. + + .. +..+.........+.+.++|++.++...++.|..||..
T Consensus 195 v~~~~~~~I~~~d~~~~~---Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDART---GLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEETTTCEEEEEEBCTTT---CCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred EEECCCCEEEEEEccccc---CCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 555667899999986 4 3 21 22233334456789999999988877667889999873
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.64 E-value=0.022 Score=44.80 Aligned_cols=116 Identities=7% Similarity=-0.019 Sum_probs=70.5
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEe--CCC-eEEEEEecCCCceEEeeeee------ccccCcceeEEEeeecCcccCC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIA--ANA-VCILKVLDKEGAVQLKRKFN------VNHKSSKYQVRSTFCPIMSFRE 155 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~--~~~-~~~v~i~d~~~~~~~~~~~~------~~h~~~~~~i~~~~s~~~~~~~ 155 (223)
..+..++++ ++|+++++.. .++ .+.+.+ + ++. +. .++ .++...+ ....+.+ +
T Consensus 17 ~~p~~va~~-------~~g~~~v~~~~~~~~~~~l~~~-~--~g~-~~-~~p~~~~~~~~~~~~p--~gv~~d~-----~ 77 (343)
T 2qe8_A 17 LAPGNITLT-------PDGRLFLSLHQFYQPEMQVAEL-T--QDG-LI-PFPPQSGNAIITFDTV--LGIKSDG-----N 77 (343)
T ss_dssp SCEEEEEEC-------TTSCEEEEECGGGCCSCSEEEE-E--TTE-EE-ESCCCCSSCCCCCSCE--EEEEECS-----S
T ss_pred CCcceEEEC-------CCCCEEEEeCCCCCCceEEEEE-C--CCC-ee-cCCCcccCcccceeEe--eEEEEcC-----C
Confidence 567889998 8999888864 122 113333 2 343 22 111 0122232 3337888 6
Q ss_pred CcEEEEecC-----CCcEEEEEcccCcccccceeecc------cccCEEEEEEecC-CCEEEEEe---CCCcEEEeeCCC
Q psy3599 156 GACVVTGSE-----DSCVYFLDIQSKEHKNAVNKLQG------HACPVLGVSFNYD-ESLLATSD---YQGLIILWSREK 220 (223)
Q Consensus 156 ~~~l~sgs~-----dg~v~iwd~~~~~~~~~~~~~~~------h~~~v~~v~~~~~-~~~l~s~s---~d~~i~iwd~~~ 220 (223)
+.++++-.. ++.|.+||..+ ++.+..+.. +......++++++ +..+++.+ .++.|.+||+.+
T Consensus 78 g~L~v~D~g~~~~~~~~i~~~d~~t---g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 78 GIVWMLDNGNQSKSVPKLVAWDTLN---NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp SEEEEEECHHHHTSCCEEEEEETTT---TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred CcEEEEcCCCCcCCCCeEEEEECCC---CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 776665433 57899999988 665554432 2235688999986 44556655 678899999876
Q ss_pred CC
Q psy3599 221 HE 222 (223)
Q Consensus 221 ~~ 222 (223)
++
T Consensus 155 g~ 156 (343)
T 2qe8_A 155 GL 156 (343)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.53 E-value=0.04 Score=43.64 Aligned_cols=105 Identities=12% Similarity=0.154 Sum_probs=63.5
Q ss_pred CeEEEEEeCCCeEEEEEecCCCceEEeeeeecccc-------CcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEccc
Q psy3599 103 PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHK-------SSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQS 175 (223)
Q Consensus 103 ~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~-------~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~ 175 (223)
+..+..++.++ .+..+|..+++.+...- .... ... +...... ++..++.++.++.|+.+|..+
T Consensus 53 ~~~v~~~~~~g--~v~a~d~~tG~~~W~~~-~~~~~~~~~~~~~~--~~~~~~~-----~~~~v~v~~~~g~l~a~d~~t 122 (376)
T 3q7m_A 53 DNVVYAADRAG--LVKALNADDGKEIWSVS-LAEKDGWFSKEPAL--LSGGVTV-----SGGHVYIGSEKAQVYALNTSD 122 (376)
T ss_dssp TTEEEEECTTS--EEEEEETTTCCEEEEEE-CCC---CCSCCCCC--EEEEEEE-----ETTEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEcCCC--eEEEEEccCCceeeeec-CccccccccccCcc--cccCceE-----eCCEEEEEcCCCEEEEEECCC
Confidence 34455555555 57778988887665421 1111 111 3222222 466777888999999999998
Q ss_pred CcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 176 KEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 176 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
++.+............... .+..++.++.++.+..+|.++++
T Consensus 123 ---G~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 123 ---GTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGA 164 (376)
T ss_dssp ---CCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred ---CCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCc
Confidence 7766555433221111122 24567778889999999998875
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.50 E-value=0.038 Score=42.50 Aligned_cols=105 Identities=12% Similarity=0.073 Sum_probs=60.2
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCC------CeEEEEEecCCCceEEe--eeeeccccCcceeEEEeeecCcccCCCc
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAAN------AVCILKVLDKEGAVQLK--RKFNVNHKSSKYQVRSTFCPIMSFREGA 157 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~d~~~~~~~~--~~~~~~h~~~~~~i~~~~s~~~~~~~~~ 157 (223)
....++|+ +++..|..+... . .+.+|+...+. +. ..+.......+ -...+.+ +++
T Consensus 189 ~p~gl~~s-------pdg~~lyv~~~~~~~~~~~--~i~~~~~~~~~-l~~~~~~~~~~~~~p--dgi~~d~-----~G~ 251 (305)
T 3dr2_A 189 HPNGLAFS-------PDEQTLYVSQTPEQGHGSV--EITAFAWRDGA-LHDRRHFASVPDGLP--DGFCVDR-----GGW 251 (305)
T ss_dssp SEEEEEEC-------TTSSEEEEEECCC---CCC--EEEEEEEETTE-EEEEEEEECCSSSCC--CSEEECT-----TSC
T ss_pred CCcceEEc-------CCCCEEEEEecCCcCCCCC--EEEEEEecCCC-ccCCeEEEECCCCCC--CeEEECC-----CCC
Confidence 34568888 888866655433 4 56677766443 21 11110111111 1114566 677
Q ss_pred EEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEE
Q psy3599 158 CVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLII 214 (223)
Q Consensus 158 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~ 214 (223)
+.++ +.+| |.+|+.. ++.+..+..+. .+.+++|.++++.|..++.++..+
T Consensus 252 lwv~-~~~g-v~~~~~~----g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 252 LWSS-SGTG-VCVFDSD----GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EEEC-CSSE-EEEECTT----SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred EEEe-cCCc-EEEECCC----CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 5544 4554 8899974 45566665444 578899999888777776654333
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.46 E-value=0.19 Score=38.19 Aligned_cols=102 Identities=13% Similarity=0.098 Sum_probs=67.4
Q ss_pred eEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccce
Q psy3599 104 TLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVN 183 (223)
Q Consensus 104 ~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~ 183 (223)
.+.++.-.++ .+.++|..+.+.+.. ++.+ .... . .+++ ++..++.+..++.|.++|..+ .+.+.
T Consensus 77 ~lyv~t~~~~--~v~viD~~t~~v~~~-i~~g-~~~g--~--glt~-----Dg~~l~vs~gs~~l~viD~~t---~~v~~ 140 (266)
T 2iwa_A 77 KLYQVVWLKN--IGFIYDRRTLSNIKN-FTHQ-MKDG--W--GLAT-----DGKILYGSDGTSILYEIDPHT---FKLIK 140 (266)
T ss_dssp EEEEEETTCS--EEEEEETTTTEEEEE-EECC-SSSC--C--EEEE-----CSSSEEEECSSSEEEEECTTT---CCEEE
T ss_pred EEEEEEecCC--EEEEEECCCCcEEEE-EECC-CCCe--E--EEEE-----CCCEEEEECCCCeEEEEECCC---CcEEE
Confidence 4444444666 788899998877664 4334 1222 2 2555 555555555688999999988 77666
Q ss_pred eecccc-----cCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 184 KLQGHA-----CPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 184 ~~~~h~-----~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+.--. ...+.+.|. ++...+....++.|.+-|..+++
T Consensus 141 ~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 141 KHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCC
T ss_pred EEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCc
Confidence 665321 136778888 67666666568899999998875
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.46 E-value=0.0054 Score=49.18 Aligned_cols=91 Identities=12% Similarity=-0.118 Sum_probs=64.7
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec----------CCCcEEEEEcccCcccccceee
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS----------EDSCVYFLDIQSKEHKNAVNKL 185 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs----------~dg~v~iwd~~~~~~~~~~~~~ 185 (223)
.+.+.|..+++.+.. +..+... ...++| ++..++.+. .++.|.+||..+ .+.+..+
T Consensus 47 ~vsvID~~t~~v~~~-i~vG~~P-----~i~~sp-----Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T---~~vv~~I 112 (368)
T 1mda_H 47 ENWVSCAGCGVTLGH-SLGAFLS-----LAVAGH-----SGSDFALASTSFARSAKGKRTDYVEVFDPVT---FLPIADI 112 (368)
T ss_dssp EEEEEETTTTEEEEE-EEECTTC-----EEEECT-----TSSCEEEEEEEETTTTSSSEEEEEEEECTTT---CCEEEEE
T ss_pred eEEEEECCCCeEEEE-EeCCCCC-----ceEECC-----CCCEEEEEcccccccccCCCCCEEEEEECCC---CCEEEEE
Confidence 466789999877764 3335443 235899 677777665 368899999999 8888887
Q ss_pred cccc-------cCEEEEEEecCCCEEEEEeC--CCcEEE--eeCCC
Q psy3599 186 QGHA-------CPVLGVSFNYDESLLATSDY--QGLIIL--WSREK 220 (223)
Q Consensus 186 ~~h~-------~~v~~v~~~~~~~~l~s~s~--d~~i~i--wd~~~ 220 (223)
.... .....+.++|||..+..+.. +..+.+ +|+.+
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 5330 12456899999998888864 467888 88743
No 232
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.40 E-value=0.04 Score=48.35 Aligned_cols=116 Identities=9% Similarity=0.026 Sum_probs=68.9
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeC-CC--eEEEEEecCCCc-eEEeeeeeccccCcceeEEEeeecCcccCCCcEEEE
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAA-NA--VCILKVLDKEGA-VQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVT 161 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~-~~--~~~v~i~d~~~~-~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~s 161 (223)
.+....|| ||||++|+.+.+ ++ ...+.++|+.++ ..+...+. ... ....|+| +++.|+.
T Consensus 175 ~~~~~~~S------~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-~~~-----~~~~Wsp-----Dg~~l~y 237 (751)
T 2xe4_A 175 DVMEVKPA------PPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-GTN-----GEIVWGP-----DHTSLFY 237 (751)
T ss_dssp EEEEEEEC------TTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-EEC-----SCCEECS-----STTEEEE
T ss_pred EEeeeEec------CCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-Cce-----eeEEEec-----CCCEEEE
Confidence 56677887 368888875442 21 225888899887 53321111 110 1125899 6776666
Q ss_pred ecCC-----CcEEEEEcccCccccc--ceeec-ccccCEEEEEEecCCCEEEEEeC---CCcEEEeeCCCC
Q psy3599 162 GSED-----SCVYFLDIQSKEHKNA--VNKLQ-GHACPVLGVSFNYDESLLATSDY---QGLIILWSREKH 221 (223)
Q Consensus 162 gs~d-----g~v~iwd~~~~~~~~~--~~~~~-~h~~~v~~v~~~~~~~~l~s~s~---d~~i~iwd~~~~ 221 (223)
...| ..|+.+++.+ +.. ...+. ........+.|+|||..|+..+. ...|.++|+.++
T Consensus 238 ~~~d~~~~~~~v~~~~lgt---~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 238 VTKDETLRENKVWRHVMGK---LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEECTTCCEEEEEEEETTS---CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEECCCCCCCEEEEEECCC---CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 5554 2577888876 332 12222 22345678899999998776552 345788888764
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.35 E-value=0.11 Score=42.62 Aligned_cols=151 Identities=13% Similarity=0.204 Sum_probs=86.3
Q ss_pred cCCcEEEEEECC----CCceeeeeeeeecCCCCeeEEEEeecccc----cC--CCCeEEEEEe-CCCeEEEEEecCCCc-
Q psy3599 58 STGVIVSILCDD----LGRLSKGKRLVLSQDCPITCLSWRSWISR----EA--RDPTLLVNIA-ANAVCILKVLDKEGA- 125 (223)
Q Consensus 58 ~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~i~~l~~~~~~~~----~~--~~~~~l~~~~-~~~~~~v~i~d~~~~- 125 (223)
+...+..+..+| -++++....+... +.....+.|+--.++ .. .++++|+..+ .+. .|.++|..+.
T Consensus 41 ~~d~la~vDvdp~s~ty~~vi~~~~~p~~-gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~--~I~viD~~t~p 117 (462)
T 2ece_A 41 RADFIAVVDVNPKSETYSKIVHKVELPYI-NDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSS--RIYIIDTKPNP 117 (462)
T ss_dssp CCCEEEEEECCTTSTTTTSEEEEEECSSS-CCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTC--CEEEEECCSCT
T ss_pred CCCeEEEEECCCCCCCcceEEEEEECCCC-CCcccccchhhhhhhcccccCCCccCCEEEEccCCCC--eEEEEECCCCC
Confidence 345677777777 3555553333222 445555556210011 01 4566666544 555 6778887533
Q ss_pred ---eEEeeeee---c-cccCcceeEEEeeecCcccCCCcEEEEecCC------CcEEEEEcccCcccccceeeccccc--
Q psy3599 126 ---VQLKRKFN---V-NHKSSKYQVRSTFCPIMSFREGACVVTGSED------SCVYFLDIQSKEHKNAVNKLQGHAC-- 190 (223)
Q Consensus 126 ---~~~~~~~~---~-~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~d------g~v~iwd~~~~~~~~~~~~~~~h~~-- 190 (223)
+... ... . ...+....-...+.| ++ ++++...+ |.|.+.|..+ .+.+..+..-..
T Consensus 118 ~~p~~~k-~ie~~~~~~~~g~s~Ph~~~~~p-----dG-i~Vs~~g~~~g~~~g~v~vlD~~T---~~v~~~~~~~~~~~ 187 (462)
T 2ece_A 118 REPKIIK-VIEPEEVKKVSGYSRLHTVHCGP-----DA-IYISALGNEEGEGPGGILMLDHYS---FEPLGKWEIDRGDQ 187 (462)
T ss_dssp TSCEEEE-EECHHHHHHHHCEEEEEEEEECS-----SC-EEEEEEEETTSCSCCEEEEECTTT---CCEEEECCSBCTTC
T ss_pred CCceeee-eechhhcccccCCCcccceeECC-----Ce-EEEEcCCCcCCCCCCeEEEEECCC---CeEEEEEccCCCCc
Confidence 2222 210 0 001111112234667 67 66665555 7899999998 888887763222
Q ss_pred -CEEEEEEecCCCEEEEEe-------------------CCCcEEEeeCCCC
Q psy3599 191 -PVLGVSFNYDESLLATSD-------------------YQGLIILWSREKH 221 (223)
Q Consensus 191 -~v~~v~~~~~~~~l~s~s-------------------~d~~i~iwd~~~~ 221 (223)
.-..+.|+|+++.+++.. .+.+|.+||+.++
T Consensus 188 ~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 188 YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 234578899999888885 3689999999764
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.31 E-value=0.07 Score=43.79 Aligned_cols=106 Identities=12% Similarity=0.112 Sum_probs=67.1
Q ss_pred CCCeEEEEEeCC------CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec-----------
Q psy3599 101 RDPTLLVNIAAN------AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS----------- 163 (223)
Q Consensus 101 ~~~~~l~~~~~~------~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs----------- 163 (223)
|+| +++++..+ + .+.+.|..+.+.+...- .+.....+.....|+| +++.+++..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g--~v~vlD~~T~~v~~~~~-~~~~~~~~~Yd~~~~p-----~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPG--GILMLDHYSFEPLGKWE-IDRGDQYLAYDFWWNL-----PNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp SSC-EEEEEEEETTSCSCC--EEEEECTTTCCEEEECC-SBCTTCCCCCCEEEET-----TTTEEEECBCCCHHHHTTCC
T ss_pred CCe-EEEEcCCCcCCCCCC--eEEEEECCCCeEEEEEc-cCCCCccccceEEECC-----CCCEEEEccCcCcccccccc
Confidence 888 65555543 4 57788999887666432 2322221112234788 788888875
Q ss_pred --------CCCcEEEEEcccCcccccceeeccc-c-cCEEEEEE--ecCCCEEEEEe------CCCcEEEeeC
Q psy3599 164 --------EDSCVYFLDIQSKEHKNAVNKLQGH-A-CPVLGVSF--NYDESLLATSD------YQGLIILWSR 218 (223)
Q Consensus 164 --------~dg~v~iwd~~~~~~~~~~~~~~~h-~-~~v~~v~~--~~~~~~l~s~s------~d~~i~iwd~ 218 (223)
.+..|.+||+.+ ++.+.++..- . .....+.| +|++.++..++ .+++|.+|..
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~---~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRK---RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTT---TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred chhhhhhccCCEEEEEECCC---CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 367899999998 7777776542 1 23455656 99998766665 4567766543
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.29 E-value=0.1 Score=41.28 Aligned_cols=102 Identities=8% Similarity=-0.041 Sum_probs=60.7
Q ss_pred CeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccc
Q psy3599 103 PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAV 182 (223)
Q Consensus 103 ~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~ 182 (223)
+..+..++.++ .+..+|..+++.+.... . ... +.. .|.. .+..++.++.++.++.+|..+ ++.+
T Consensus 103 ~~~v~v~~~~g--~l~a~d~~tG~~~W~~~--~-~~~---~~~--~p~~---~~~~v~v~~~~g~l~~~d~~t---G~~~ 166 (376)
T 3q7m_A 103 GGHVYIGSEKA--QVYALNTSDGTVAWQTK--V-AGE---ALS--RPVV---SDGLVLIHTSNGQLQALNEAD---GAVK 166 (376)
T ss_dssp TTEEEEEETTS--EEEEEETTTCCEEEEEE--C-SSC---CCS--CCEE---ETTEEEEECTTSEEEEEETTT---CCEE
T ss_pred CCEEEEEcCCC--EEEEEECCCCCEEEEEe--C-CCc---eEc--CCEE---ECCEEEEEcCCCeEEEEECCC---CcEE
Confidence 34444555556 57778988887665431 1 111 111 1110 355777788899999999988 7766
Q ss_pred eeecccccCE-----EEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 183 NKLQGHACPV-----LGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 183 ~~~~~h~~~v-----~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.......... ..... .+..+..++.++.+..+|.++++
T Consensus 167 W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 167 WTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp EEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCC
T ss_pred EEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCc
Confidence 6554322110 11112 24567778888999999988765
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.29 E-value=0.16 Score=41.37 Aligned_cols=79 Identities=10% Similarity=0.072 Sum_probs=54.4
Q ss_pred EEEEeecccccCCCCeEEEEEe----------CCCeEEEEEecCCCceEEeeeeecc-c-----cCcceeEEEeeecCcc
Q psy3599 89 CLSWRSWISREARDPTLLVNIA----------ANAVCILKVLDKEGAVQLKRKFNVN-H-----KSSKYQVRSTFCPIMS 152 (223)
Q Consensus 89 ~l~~~~~~~~~~~~~~~l~~~~----------~~~~~~v~i~d~~~~~~~~~~~~~~-h-----~~~~~~i~~~~s~~~~ 152 (223)
.+.++ +|++.|..+. .+. .+.++|..+++.+.... .+ . ...+ -...++|
T Consensus 122 gia~S-------pDgk~lyVan~~~~~~~~G~~~~--~VsviD~~t~~vv~~I~-v~g~~r~~~g~~P--~~~~~sp--- 186 (426)
T 3c75_H 122 HPVAA-------EDGSFFAQASTVFERIARGKRTD--YVEVFDPVTFLPIADIE-LPDAPRFLVGTYQ--WMNALTP--- 186 (426)
T ss_dssp EEEEC-------TTSSCEEEEEEEEEETTEEEEEE--EEEEECTTTCCEEEEEE-ETTCCCCCBSCCG--GGSEECT---
T ss_pred ceEEC-------CCCCEEEEEeccccccccCCCCC--EEEEEECCCCcEEEEEE-CCCccccccCCCc--ceEEEcC---
Confidence 89999 8998777654 234 68889999887665432 22 0 0111 2225888
Q ss_pred cCCCcEEEEecC--CCcEEEEEcccCcccccceeecc
Q psy3599 153 FREGACVVTGSE--DSCVYFLDIQSKEHKNAVNKLQG 187 (223)
Q Consensus 153 ~~~~~~l~sgs~--dg~v~iwd~~~~~~~~~~~~~~~ 187 (223)
++++++.+.. ++.|.+.|..+ .+.+..+..
T Consensus 187 --DGk~lyV~n~~~~~~VsVID~~t---~kvv~~I~v 218 (426)
T 3c75_H 187 --DNKNLLFYQFSPAPAVGVVDLEG---KTFDRMLDV 218 (426)
T ss_dssp --TSSEEEEEECSSSCEEEEEETTT---TEEEEEEEC
T ss_pred --CCCEEEEEecCCCCeEEEEECCC---CeEEEEEEc
Confidence 7888887764 57899999999 777776653
No 237
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.27 E-value=0.13 Score=44.55 Aligned_cols=55 Identities=16% Similarity=0.116 Sum_probs=40.9
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+|.|..||..+ ++.+-..+.+. ......+...+.+++.++.|+.++.||.++++
T Consensus 436 ~~g~l~A~D~~t---G~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 436 VSGALLAWDPVK---QKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp CEEEEEEEETTT---TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccceEEEEeCCC---CcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 347899999999 88766665332 23333445578888889999999999999876
No 238
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.27 E-value=0.079 Score=45.92 Aligned_cols=114 Identities=13% Similarity=0.023 Sum_probs=67.3
Q ss_pred CeeEEEEeecccccCCCCeEEEEEe-CCC-eEEEEEecCCCce-EEeeeeeccccCcceeEEEeeecCcccCCCcEEEEe
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIA-ANA-VCILKVLDKEGAV-QLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTG 162 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~-~~~-~~~v~i~d~~~~~-~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sg 162 (223)
....+.|+ +||++|+... .+. -..+.++|+.++. ... .+ ..+.... ...+++. ++.+++..
T Consensus 235 ~~~~~~~S-------pDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~-~l-~~~~~~~---~~~~~~~----g~~l~~~t 298 (693)
T 3iuj_A 235 RYVGATVT-------EDDRFLLISAANSTSGNRLYVKDLSQENAPLL-TV-QGDLDAD---VSLVDNK----GSTLYLLT 298 (693)
T ss_dssp SEEEEEEC-------TTSCEEEEEEESSSSCCEEEEEETTSTTCCCE-EE-ECSSSSC---EEEEEEE----TTEEEEEE
T ss_pred EEEEEEEc-------CCCCEEEEEEccCCCCcEEEEEECCCCCCceE-EE-eCCCCce---EEEEecc----CCEEEEEE
Confidence 35678899 9998876433 221 1157778876552 122 22 2444332 2224552 34555555
Q ss_pred cCC---CcEEEEEcccCccccc--ceeecccccCEEEEEEecCCCEEEEEeC-CC--cEEEeeCCC
Q psy3599 163 SED---SCVYFLDIQSKEHKNA--VNKLQGHACPVLGVSFNYDESLLATSDY-QG--LIILWSREK 220 (223)
Q Consensus 163 s~d---g~v~iwd~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~--~i~iwd~~~ 220 (223)
..+ +.|..+|+.+ +.. ...+..|...+. .|+++++.|+.... ++ .|++||+..
T Consensus 299 ~~~~~~~~l~~~d~~~---~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 299 NRDAPNRRLVTVDAAN---PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp CTTCTTCEEEEEETTS---CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred CCCCCCCEEEEEeCCC---CCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 544 5788899887 433 345555666555 88999888776654 43 588888764
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.01 E-value=0.19 Score=38.21 Aligned_cols=101 Identities=8% Similarity=-0.013 Sum_probs=66.2
Q ss_pred eEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccce
Q psy3599 104 TLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVN 183 (223)
Q Consensus 104 ~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~ 183 (223)
.+.+..-.++ .+.++|.++.+.+.+. ..+..+.. +++ ++..|+.+..++.|.++|..+ .+.+.
T Consensus 107 ~Ly~ltw~~~--~v~V~D~~Tl~~~~ti-~~~~eGwG------Lt~-----Dg~~L~vSdGs~~l~~iDp~T---~~v~~ 169 (268)
T 3nok_A 107 RLYQLTWTEG--LLFTWSGMPPQRERTT-RYSGEGWG------LCY-----WNGKLVRSDGGTMLTFHEPDG---FALVG 169 (268)
T ss_dssp CEEEEESSSC--EEEEEETTTTEEEEEE-ECSSCCCC------EEE-----ETTEEEEECSSSEEEEECTTT---CCEEE
T ss_pred EEEEEEccCC--EEEEEECCcCcEEEEE-eCCCceeE------Eec-----CCCEEEEECCCCEEEEEcCCC---CeEEE
Confidence 3333444566 7889999998777653 22322222 334 466666666688999999988 77776
Q ss_pred eecccc-----cCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 184 KLQGHA-----CPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 184 ~~~~h~-----~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+.... ..++.+.|. +|.+.+..-.++.|.+-|.++++
T Consensus 170 ~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 170 AVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred EEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 665322 145667776 67666666567889998988875
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.83 E-value=0.32 Score=41.22 Aligned_cols=55 Identities=11% Similarity=0.081 Sum_probs=37.8
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+|.|..||..+ ++.+-.+... ..+........+..+..++.|+.++.||.++++
T Consensus 442 ~~g~l~a~D~~t---G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 442 EMGQIRAFDLTT---GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CCEEEEEECTTT---CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCeEEEEECCC---CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 357899999988 7766665422 222222223346677778899999999999886
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.74 E-value=0.062 Score=46.60 Aligned_cols=77 Identities=13% Similarity=0.063 Sum_probs=51.4
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccc-cCEEE
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHA-CPVLG 194 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~-~~v~~ 194 (223)
.+..||+.+++.+... .+.... ....+.. .+.+++.|+.||.+++||..+ ++.+..+.... ....-
T Consensus 458 ~l~A~D~~tG~~~W~~---~~~~~~--~~g~~~~-----~g~~v~~g~~dg~l~a~D~~t---G~~lw~~~~~~~~~~~p 524 (677)
T 1kb0_A 458 RLLAWDPVAQKAAWSV---EHVSPW--NGGTLTT-----AGNVVFQGTADGRLVAYHAAT---GEKLWEAPTGTGVVAAP 524 (677)
T ss_dssp EEEEEETTTTEEEEEE---EESSSC--CCCEEEE-----TTTEEEEECTTSEEEEEETTT---CCEEEEEECSSCCCSCC
T ss_pred EEEEEeCCCCcEEeec---CCCCCC--cCcceEe-----CCCEEEEECCCCcEEEEECCC---CceeeeeeCCCCcccCC
Confidence 6788899998776653 222221 1113444 577888899999999999999 89888886433 22334
Q ss_pred EEEecCCCEEE
Q psy3599 195 VSFNYDESLLA 205 (223)
Q Consensus 195 v~~~~~~~~l~ 205 (223)
+.|..+|..++
T Consensus 525 ~~y~~~G~~~v 535 (677)
T 1kb0_A 525 STYMVDGRQYV 535 (677)
T ss_dssp EEEEETTEEEE
T ss_pred EEEEeCCEEEE
Confidence 56667776443
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.67 E-value=0.045 Score=47.56 Aligned_cols=76 Identities=14% Similarity=0.048 Sum_probs=51.4
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccccc-CEEE
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHAC-PVLG 194 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~-~v~~ 194 (223)
.+..||+.+++.+... .+.... ....+.. .+.+++.|+.||.++.||.++ ++.+.+++.... ...-
T Consensus 456 ~l~A~D~~tG~~~W~~---~~~~~~--~~g~~~t-----agglvf~gt~dg~l~a~D~~t---G~~lw~~~~~~~~~~~p 522 (689)
T 1yiq_A 456 KLIAWDPVKQQAAWEV---PYVTIF--NGGTLST-----AGNLVFEGSADGRVIAYAADT---GEKLWEQPAASGVMAAP 522 (689)
T ss_dssp EEEEEETTTTEEEEEE---EESSSC--CCCEEEE-----TTTEEEEECTTSEEEEEETTT---CCEEEEEECSSCCCSCC
T ss_pred eEEEEECCCCCeEeEc---cCCCCc--cCccceE-----CCCEEEEECCCCcEEEEECCC---CccceeeeCCCCcccCc
Confidence 6888999998776653 222211 1123444 578999999999999999999 998888765432 2234
Q ss_pred EEEecCCCEE
Q psy3599 195 VSFNYDESLL 204 (223)
Q Consensus 195 v~~~~~~~~l 204 (223)
+.|..+|...
T Consensus 523 ~ty~~~G~qy 532 (689)
T 1yiq_A 523 VTYSVDGEQY 532 (689)
T ss_dssp EEEEETTEEE
T ss_pred eEEEECCEEE
Confidence 6677777643
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.60 E-value=0.52 Score=35.70 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=65.3
Q ss_pred eEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccce
Q psy3599 104 TLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVN 183 (223)
Q Consensus 104 ~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~ 183 (223)
.+.+..-.++ .+.++|.++.+.+... ..+..+.. +++ ++..|+.+..++.|.++|..+ .+.+.
T Consensus 98 ~ly~ltw~~~--~v~v~D~~t~~~~~ti-~~~~eG~g------lt~-----dg~~L~~SdGs~~i~~iDp~T---~~v~~ 160 (262)
T 3nol_A 98 KIVGLTWKNG--LGFVWNIRNLRQVRSF-NYDGEGWG------LTH-----NDQYLIMSDGTPVLRFLDPES---LTPVR 160 (262)
T ss_dssp EEEEEESSSS--EEEEEETTTCCEEEEE-ECSSCCCC------EEE-----CSSCEEECCSSSEEEEECTTT---CSEEE
T ss_pred EEEEEEeeCC--EEEEEECccCcEEEEE-ECCCCceE------Eec-----CCCEEEEECCCCeEEEEcCCC---CeEEE
Confidence 3333444566 7889999988776643 22322222 344 566666655577899999998 77766
Q ss_pred eecccc-----cCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 184 KLQGHA-----CPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 184 ~~~~h~-----~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+.... ..++.+.|. +|...+..-.++.|.+-|.++++
T Consensus 161 ~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 161 TITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGK 203 (262)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCB
T ss_pred EEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCc
Confidence 654321 235567776 67766666568889988988775
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.58 E-value=0.23 Score=38.01 Aligned_cols=110 Identities=13% Similarity=0.094 Sum_probs=62.3
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs 163 (223)
..+.++... +++.+.+.+.+++ +..++.. +..+... . ..... ... ...+ +..|..++
T Consensus 215 ~~~~~~~~~-------~~g~l~v~t~~~g---l~~~~~~-g~~~~~~-~-~~~~~---~~~~~~~~------~g~l~v~t 272 (330)
T 3hxj_A 215 WTVTRPAIS-------EDGTIYVTSLDGH---LYAINPD-GTEKWRF-K-TGKRI---ESSPVIGN------TDTIYFGS 272 (330)
T ss_dssp CCCSCCEEC-------TTSCEEEEETTTE---EEEECTT-SCEEEEE-E-CSSCC---CSCCEECT------TSCEEEEC
T ss_pred cceeceEEC-------CCCeEEEEcCCCe---EEEECCC-CCEeEEe-e-CCCCc---cccceEcC------CCeEEEec
Confidence 456666666 6777666554555 3444654 4344322 1 11111 111 2332 44566678
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.+|.+..+|. + ++.+..+......+.++...+++.+ ..++.+|.+++...+..
T Consensus 273 ~~ggl~~~d~-~---g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 273 YDGHLYAINP-D---GTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYALFNLEH 325 (330)
T ss_dssp TTCEEEEECT-T---SCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEEEEC---
T ss_pred CCCCEEEECC-C---CcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEEEecccc
Confidence 8888999985 5 5555555444455666776677774 45778999998876543
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.40 E-value=0.58 Score=35.00 Aligned_cols=102 Identities=13% Similarity=0.017 Sum_probs=64.5
Q ss_pred CeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccc
Q psy3599 103 PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAV 182 (223)
Q Consensus 103 ~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~ 182 (223)
+.+.+..-.++ .+.++|.++.+.+.+. +.+..+. . +++ ++..|+.+..++.|.++|..+ .+.+
T Consensus 75 ~~ly~ltw~~~--~v~v~D~~tl~~~~ti-~~~~~Gw----g--lt~-----dg~~L~vSdgs~~l~~iDp~t---~~~~ 137 (243)
T 3mbr_X 75 DRLIQLTWRNH--EGFVYDLATLTPRARF-RYPGEGW----A--LTS-----DDSHLYMSDGTAVIRKLDPDT---LQQV 137 (243)
T ss_dssp TEEEEEESSSS--EEEEEETTTTEEEEEE-ECSSCCC----E--EEE-----CSSCEEEECSSSEEEEECTTT---CCEE
T ss_pred CEEEEEEeeCC--EEEEEECCcCcEEEEE-eCCCCce----E--Eee-----CCCEEEEECCCCeEEEEeCCC---CeEE
Confidence 34444444566 7889999998777643 3232222 2 334 455555555688899999998 7776
Q ss_pred eeecccc-----cCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 183 NKLQGHA-----CPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 183 ~~~~~h~-----~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
..++-.. ..++.+.|. +|..++..-.+..|.+-|.++++
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB
T ss_pred EEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC
Confidence 6665322 245666665 56666655567788888888765
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.39 E-value=0.045 Score=43.77 Aligned_cols=52 Identities=2% Similarity=-0.071 Sum_probs=41.7
Q ss_pred cEEEEEcccCcccccceeecccccCEEEEEEecCCC-EEEEEe-CCCcEEEeeCCCCC
Q psy3599 167 CVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDES-LLATSD-YQGLIILWSREKHE 222 (223)
Q Consensus 167 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s-~d~~i~iwd~~~~~ 222 (223)
.+.++|..+ .+.+..+.... ....+.|+|++. .+++.. .++.|.++|+.+.+
T Consensus 295 ~~~ViD~~t---~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 295 NTSSVTASV---GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEESSS---CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CEEEEECCC---CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 466999999 88888776543 578999999987 566666 59999999998764
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.20 E-value=0.41 Score=36.60 Aligned_cols=105 Identities=12% Similarity=0.144 Sum_probs=58.4
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs 163 (223)
..+.++... +++.+++ ++.++ .+..+|.. +..+... . ..... +.. ...+ ++.+++ ++
T Consensus 137 ~~~~~~~~~-------~~g~l~v-gt~~~--~l~~~d~~-g~~~~~~-~-~~~~~---~~~~~~d~-----~g~l~v-~t 194 (330)
T 3hxj_A 137 AIYATPIVS-------EDGTIYV-GSNDN--YLYAINPD-GTEKWRF-K-TNDAI---TSAASIGK-----DGTIYF-GS 194 (330)
T ss_dssp CCCSCCEEC-------TTSCEEE-ECTTS--EEEEECTT-SCEEEEE-E-CSSCC---CSCCEECT-----TCCEEE-ES
T ss_pred ceeeeeEEc-------CCCEEEE-EcCCC--EEEEECCC-CCEeEEE-e-cCCCc---eeeeEEcC-----CCEEEE-Ee
Confidence 344555555 5777555 44445 56677887 5444332 1 11111 222 2333 455544 44
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSR 218 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 218 (223)
+.+..+| .+ ++.+.........+.++...+++.+.+ ++.++.+..+|.
T Consensus 195 --~~l~~~d-~~---g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~ 242 (330)
T 3hxj_A 195 --DKVYAIN-PD---GTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP 242 (330)
T ss_dssp --SSEEEEC-TT---SCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT
T ss_pred --CEEEEEC-CC---CcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECC
Confidence 7788899 55 555555554445577777777776444 455667777764
No 248
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.06 E-value=0.83 Score=37.25 Aligned_cols=116 Identities=19% Similarity=0.243 Sum_probs=70.8
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCc---------eEEeeeeeccc-----cCcceeEEEeeecCc
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGA---------VQLKRKFNVNH-----KSSKYQVRSTFCPIM 151 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~---------~~~~~~~~~~h-----~~~~~~i~~~~s~~~ 151 (223)
.|..+..+ |+|.+||..+...+..+.+-+.... .... .+..+. ...+ ....|+|.+
T Consensus 67 ~i~qlvlS-------psG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~-ty~l~~~~~~~~s~I--~qVlWHPl~ 136 (452)
T 3pbp_A 67 DTFHVISS-------TSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIF-HYSIDEEEVGPKSSI--KKVLFHPKS 136 (452)
T ss_dssp TTCEEEEC-------TTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEE-EEEGGGCC--CCCCE--EEEEECTTB
T ss_pred ceeEEEEC-------CCCCEEEEecCCeEEEEEecCccccCccccccccccee-EEEcCCcccCCCCce--eEEEecccc
Confidence 67889999 9999999988877555544311110 0111 222232 2222 334899964
Q ss_pred ccCCCcEEEEecCCCcEEEEEcccCcccccceeec---------ccccCEEEEEEecCCCEEEEEe--CCCcEEE
Q psy3599 152 SFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQ---------GHACPVLGVSFNYDESLLATSD--YQGLIIL 215 (223)
Q Consensus 152 ~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~---------~h~~~v~~v~~~~~~~~l~s~s--~d~~i~i 215 (223)
.. +..|++-..|+.|++||+.... .++. .++ .....|.+++|.+++-.|-..+ .+|.|+-
T Consensus 137 ~~--ds~LVVLtsD~~Ir~yDl~~s~-~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 137 YR--DSCIVVLKEDDTITMFDILNSQ-EKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp GG--GCEEEEEETTSCEEEEETTCTT-SCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred CC--CCeEEEEecCCEEEEEEcccCC-CCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 33 6688888999999999998611 2222 221 2225688999988776555533 6676653
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.70 E-value=0.08 Score=44.92 Aligned_cols=106 Identities=16% Similarity=0.096 Sum_probs=65.0
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEe-CCCeEEEEEecCCCceE-----------EeeeeeccccCcceeEEEeeecCcc
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIA-ANAVCILKVLDKEGAVQ-----------LKRKFNVNHKSSKYQVRSTFCPIMS 152 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~d~~~~~~-----------~~~~~~~~h~~~~~~i~~~~s~~~~ 152 (223)
....++.++ |||+++++++ .+. .+.++|..+... +......| ..+ ...+|+|
T Consensus 277 ~~PhGv~~s-------PDGk~v~V~~~~s~--~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG--~gP--~h~aF~~--- 340 (595)
T 1fwx_A 277 NNPHGCNMA-------PDKKHLCVAGKLSP--TVTVLDVTRFDAVFYENADPRSAVVAEPELG--LGP--LHTAFDG--- 340 (595)
T ss_dssp SSCCCEEEC-------TTSSEEEEECTTSS--BEEEEEGGGHHHHHHSCCCGGGGEEECCBCC--SCE--EEEEECT---
T ss_pred CCceEEEEc-------CCCCEEEEeCCCCC--eEEEEECcccccccccccCcccceEEEcCCC--CCc--ceEEECC---
Confidence 345678888 9999888766 444 678888875421 11111112 112 6668999
Q ss_pred cCCCcEEEEecCCCcEEEEEcccCc-------ccccceeecccccCE-----EEEEEecCCCEEEEEe
Q psy3599 153 FREGACVVTGSEDSCVYFLDIQSKE-------HKNAVNKLQGHACPV-----LGVSFNYDESLLATSD 208 (223)
Q Consensus 153 ~~~~~~l~sgs~dg~v~iwd~~~~~-------~~~~~~~~~~h~~~v-----~~v~~~~~~~~l~s~s 208 (223)
+|...++.-.|+.|.+||+.... ..+.+.++..|-.+- ..+..+|||.+|+++.
T Consensus 341 --dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 341 --RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp --TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred --CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 78666677779999999987610 023455555443321 2224478999988876
No 250
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.65 E-value=0.65 Score=39.91 Aligned_cols=109 Identities=13% Similarity=0.079 Sum_probs=63.8
Q ss_pred CCeEEEEEeCC---------CeEEEEEecCCCceEEee-eeeccccCcceeEEEeeecCcccCCCcEEEEecC-CCcEEE
Q psy3599 102 DPTLLVNIAAN---------AVCILKVLDKEGAVQLKR-KFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE-DSCVYF 170 (223)
Q Consensus 102 ~~~~l~~~~~~---------~~~~v~i~d~~~~~~~~~-~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~-dg~v~i 170 (223)
++.+++.|+.+ ....+.+||+.++..... .+...+.... ...++.+ ++.+++.|+. +..+.+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~--~~~~~~~-----~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFC--PGISMDG-----NGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSS--CEEEECT-----TSCEEEECSSSTTCEEE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCcc--ccccCCC-----CCCEEEeCCCCCCceEE
Confidence 88888887632 233578899887642211 1111111110 1123445 7889999985 457999
Q ss_pred EEcccCcccccc--eeecccccCEEEEEEecCCCEEEEEe-CC-----CcEEEeeCCCC
Q psy3599 171 LDIQSKEHKNAV--NKLQGHACPVLGVSFNYDESLLATSD-YQ-----GLIILWSREKH 221 (223)
Q Consensus 171 wd~~~~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s-~d-----~~i~iwd~~~~ 221 (223)
||..+ .+.. ..+..... -.++...+++.+++.|+ .+ ..+.+||..+.
T Consensus 270 yd~~t---~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 270 YDSSS---DSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEGGG---TEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ecCcC---CceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 99887 4322 22222111 23445567899999998 34 56899998764
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.09 E-value=0.73 Score=39.81 Aligned_cols=59 Identities=8% Similarity=0.086 Sum_probs=36.5
Q ss_pred EEEecCCCceEEeeeeeccccCcc-----eeEEEeeecCcccCCCc---EEEEecCCCcEEEEEcccCcccccce
Q psy3599 117 LKVLDKEGAVQLKRKFNVNHKSSK-----YQVRSTFCPIMSFREGA---CVVTGSEDSCVYFLDIQSKEHKNAVN 183 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~~~~h~~~~-----~~i~~~~s~~~~~~~~~---~l~sgs~dg~v~iwd~~~~~~~~~~~ 183 (223)
+..+|..+++.+.......|.... ..+...+.. ++. .++.++.+|.++++|..+ ++++.
T Consensus 272 v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~-----~G~~~~~v~~~~~~G~l~~lD~~t---G~~l~ 338 (668)
T 1kv9_A 272 ILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI-----DGKPRKVLMQAPKNGFFYVLDRTN---GKLIS 338 (668)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-----TTEEEEEEEECCTTSEEEEEETTT---CCEEE
T ss_pred EEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc-----CCcEEEEEEEECCCCEEEEEECCC---CCEec
Confidence 667799999877654321232111 002212222 454 688999999999999998 77663
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.93 E-value=0.75 Score=39.08 Aligned_cols=66 Identities=15% Similarity=0.242 Sum_probs=47.3
Q ss_pred eeecCcccCCCcEEE-EecCCCcEEEEEcccCcccc------------cceeecccccCEEEEEEecCCCEEEEEeCCCc
Q psy3599 146 TFCPIMSFREGACVV-TGSEDSCVYFLDIQSKEHKN------------AVNKLQGHACPVLGVSFNYDESLLATSDYQGL 212 (223)
Q Consensus 146 ~~s~~~~~~~~~~l~-sgs~dg~v~iwd~~~~~~~~------------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~ 212 (223)
.++| ||++++ ++..+..|.++|+.+ .+ .+..+.. ......++|+|+|...++.-.|+.
T Consensus 283 ~~sP-----DGk~v~V~~~~s~~VsVid~~~---~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsq 353 (595)
T 1fwx_A 283 NMAP-----DKKHLCVAGKLSPTVTVLDVTR---FDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQ 353 (595)
T ss_dssp EECT-----TSSEEEEECTTSSBEEEEEGGG---HHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTE
T ss_pred EEcC-----CCCEEEEeCCCCCeEEEEECcc---cccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCc
Confidence 5888 677555 555678999999997 42 2233332 235788999999965566678999
Q ss_pred EEEeeCCC
Q psy3599 213 IILWSREK 220 (223)
Q Consensus 213 i~iwd~~~ 220 (223)
|..||+.+
T Consensus 354 V~kwdi~~ 361 (595)
T 1fwx_A 354 VVKWNIED 361 (595)
T ss_dssp EEEEEHHH
T ss_pred EEEEEhhH
Confidence 99999764
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.78 E-value=0.32 Score=41.37 Aligned_cols=54 Identities=15% Similarity=0.138 Sum_probs=37.3
Q ss_pred CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+|.|..||..+ ++.+-..+... ++..-.....+.+++.++.|+.++.||.++++
T Consensus 465 ~G~l~A~D~~t---G~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVS---GKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTT---CCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCC---CCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence 57899999998 77665554322 22211122246778889999999999999886
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.76 E-value=4.7 Score=35.31 Aligned_cols=141 Identities=15% Similarity=0.169 Sum_probs=79.9
Q ss_pred CCcEEEEEECCCCceeeee-------------eee-e-c-------CCCCeeEEEEeecccccCCCCeEEEEEeCCCeEE
Q psy3599 59 TGVIVSILCDDLGRLSKGK-------------RLV-L-S-------QDCPITCLSWRSWISREARDPTLLVNIAANAVCI 116 (223)
Q Consensus 59 ~~~i~~~~~~~~~~~~~~~-------------~~~-~-~-------~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 116 (223)
.+.|.++..|.+|.++... .+. . + ....|.++... .++.+-+....++
T Consensus 309 ~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d-------~~g~lWiGt~~~G--- 378 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVED-------KDKNLWIGTNDGG--- 378 (795)
T ss_dssp SSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEEC-------TTSCEEEEESSSC---
T ss_pred CCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEEC-------CCCCEEEEECCCC---
Confidence 3567788888877776532 000 0 0 12357888877 7777666544556
Q ss_pred EEEecCCCceEEeeeeec-----cccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeec----
Q psy3599 117 LKVLDKEGAVQLKRKFNV-----NHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQ---- 186 (223)
Q Consensus 117 v~i~d~~~~~~~~~~~~~-----~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~---- 186 (223)
+..++..++....-.... +-.... +.+ ...+ ++..|..|+.++-+..+|..+ ++......
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~--v~~i~~d~-----~g~~lWigt~~~Gl~~~d~~~---~~~~~~~~~~~~ 448 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNN--IKAVYVDE-----KKSLVYIGTHAGGLSILHRNS---GQVENFNQRNSQ 448 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSC--EEEEEEET-----TTTEEEEEETTTEEEEEETTT---CCEEEECTTTSC
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCcc--EEEEEEcC-----CCCEEEEEeCcCceeEEeCCC---CcEEEeecCCCC
Confidence 456677665432211000 001111 555 4444 566455677766689999877 44322111
Q ss_pred ccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 187 GHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 187 ~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.....|.++...+++.+.+... + -+.+||..++
T Consensus 449 l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~ 481 (795)
T 4a2l_A 449 LVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQR 481 (795)
T ss_dssp CSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTT
T ss_pred cCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCC
Confidence 1345789998888888665554 4 4778887653
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.67 E-value=3.4 Score=33.47 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=43.9
Q ss_pred eeecCcccCCCcEEEEecCCCcEEEEEcccCccccc--ceeecccccCEEEEEEecCCC-EEEEEeCCCcEEEeeCC
Q psy3599 146 TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNA--VNKLQGHACPVLGVSFNYDES-LLATSDYQGLIILWSRE 219 (223)
Q Consensus 146 ~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~ 219 (223)
+++|. ++.++++-...+.|+.++... +.. +..... ......++|+|+++ ++++-...+.|..++..
T Consensus 232 avdp~----~g~lyv~d~~~~~V~~~~~~~---~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 232 ETHPI----NGELYFNSWNAGQVFRYDFTT---QETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EECTT----TCCEEEEETTTTEEEEEETTT---TEEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEeCC----CCEEEEEECCCCEEEEEECCC---CcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 46663 467777776778899999876 433 222221 23457899999999 45555567888887754
No 256
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=92.39 E-value=3.2 Score=32.54 Aligned_cols=117 Identities=12% Similarity=0.086 Sum_probs=70.0
Q ss_pred CeeEEEE---eecccccCCCCeEEEEEeC-------------CCeEEEEEecCC---CceEEeeeeeccccC--------
Q psy3599 86 PITCLSW---RSWISREARDPTLLVNIAA-------------NAVCILKVLDKE---GAVQLKRKFNVNHKS-------- 138 (223)
Q Consensus 86 ~i~~l~~---~~~~~~~~~~~~~l~~~~~-------------~~~~~v~i~d~~---~~~~~~~~~~~~h~~-------- 138 (223)
.+..|.| . +++.++++... +. .+..+|+. +++.+...--.+...
T Consensus 64 ~~sGl~~~~~D-------~~grL~vv~~~~~af~~~g~~~~g~~--~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~ 134 (334)
T 2p9w_A 64 QMSGLSLLTHD-------NSKRLFAVMKNAKSFNFADQSSHGAS--SFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGK 134 (334)
T ss_dssp EEEEEEESSSS-------SCCEEEEEEEETTTTCTTSCCSSSCC--EEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSS
T ss_pred eeeEEEEeccC-------CCCcEEEEEcccccccccccccCCCC--EEEEEcCCcCCCCCEEEEecCccccccccccccc
Confidence 3578888 6 66888875331 33 67778887 554433210001111
Q ss_pred c-ceeEEEeeecCcccCCCcEEEEecCC-CcEEEEEcccCcccccceeec------ccccCEEEEEEecCCCEEEEEeCC
Q psy3599 139 S-KYQVRSTFCPIMSFREGACVVTGSED-SCVYFLDIQSKEHKNAVNKLQ------GHACPVLGVSFNYDESLLATSDYQ 210 (223)
Q Consensus 139 ~-~~~i~~~~s~~~~~~~~~~l~sgs~d-g~v~iwd~~~~~~~~~~~~~~------~h~~~v~~v~~~~~~~~l~s~s~d 210 (223)
. ......+..+ +|+..++++.- +.|...+... . .+..+. ......+.|+++|++..|+....+
T Consensus 135 ~~~~~nDvavD~-----~GnaYVt~s~~~~~I~rV~pdG---~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~ 205 (334)
T 2p9w_A 135 RPFGVVQSAQDR-----DGNSYVAFALGMPAIARVSADG---K-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGP 205 (334)
T ss_dssp CCEEEEEEEECT-----TSCEEEEEEESSCEEEEECTTS---C-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSS
T ss_pred cccCCceeEECC-----CCCEEEeCCCCCCeEEEEeCCC---C-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCC
Confidence 1 1113335677 78988888877 7766555543 2 122111 112235689999999988888779
Q ss_pred CcEEEeeCCC
Q psy3599 211 GLIILWSREK 220 (223)
Q Consensus 211 ~~i~iwd~~~ 220 (223)
+.+.-+|+++
T Consensus 206 g~L~~fD~~~ 215 (334)
T 2p9w_A 206 RALTAFDVSK 215 (334)
T ss_dssp SSEEEEECSS
T ss_pred CeEEEEcCCC
Confidence 9999999763
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.34 E-value=1.3 Score=37.76 Aligned_cols=55 Identities=7% Similarity=0.007 Sum_probs=36.5
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+|.+..||..+ ++.+-..+. ..++..-.....+.++..++.|+.++.||.++++
T Consensus 451 ~~G~l~A~D~~t---G~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 451 GLGQIKAYNAIT---GDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CCEEEEEECTTT---CCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CcCeEEEEECCC---CCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 347888899888 776655532 1112111122356777778999999999999886
No 258
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.31 E-value=3.5 Score=33.61 Aligned_cols=70 Identities=7% Similarity=0.095 Sum_probs=48.2
Q ss_pred EeeecCcccCCCcEEEEecCCCcEEEEEcccCccc-c--------cceeecc------cccCEEEEEEecC---CCEEEE
Q psy3599 145 STFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHK-N--------AVNKLQG------HACPVLGVSFNYD---ESLLAT 206 (223)
Q Consensus 145 ~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~-~--------~~~~~~~------h~~~v~~v~~~~~---~~~l~s 206 (223)
...+| +|++|+.-+.. .|.|-.+...... . ..+.+.- ...+|..+.|+|- +..|++
T Consensus 71 lvlSp-----sG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 71 VISST-----SGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp EEECT-----TSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred EEECC-----CCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 36788 78888877554 6888887731000 0 0112221 2467999999995 678999
Q ss_pred EeCCCcEEEeeCCC
Q psy3599 207 SDYQGLIILWSREK 220 (223)
Q Consensus 207 ~s~d~~i~iwd~~~ 220 (223)
-..|+.||+||+..
T Consensus 145 LtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 145 LKEDDTITMFDILN 158 (452)
T ss_dssp EETTSCEEEEETTC
T ss_pred EecCCEEEEEEccc
Confidence 99999999999975
No 259
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=91.72 E-value=3.3 Score=31.13 Aligned_cols=116 Identities=11% Similarity=0.289 Sum_probs=65.4
Q ss_pred CCCeeEEEEeecccccCCCCe-EEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEE
Q psy3599 84 DCPITCLSWRSWISREARDPT-LLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVT 161 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~-~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~s 161 (223)
...+..++|+ +++. ++++...+. .+...|.. +..+... +.+-... ... ++.+ ++.++++
T Consensus 26 ~~~lSGla~~-------~~~~~L~aV~d~~~--~I~~ld~~-g~v~~~i-~l~g~~D---~EGIa~~~-----~g~~~vs 86 (255)
T 3qqz_A 26 TNNISSLTWS-------AQSNTLFSTINKPA--AIVEMTTN-GDLIRTI-PLDFVKD---LETIEYIG-----DNQFVIS 86 (255)
T ss_dssp CSCEEEEEEE-------TTTTEEEEEEETTE--EEEEEETT-CCEEEEE-ECSSCSS---EEEEEECS-----TTEEEEE
T ss_pred ccCcceeEEe-------CCCCEEEEEECCCC--eEEEEeCC-CCEEEEE-ecCCCCC---hHHeEEeC-----CCEEEEE
Confidence 4569999999 6655 444444444 45555776 5555433 2121122 222 4555 5666666
Q ss_pred ecCCCcEEEEEcccCcccccceee------cccccCEEEEEEecCCCEEEEEeCCCcEEEeeC
Q psy3599 162 GSEDSCVYFLDIQSKEHKNAVNKL------QGHACPVLGVSFNYDESLLATSDYQGLIILWSR 218 (223)
Q Consensus 162 gs~dg~v~iwd~~~~~~~~~~~~~------~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~ 218 (223)
.-.++.+.++++........+... ...+.....++|+|.++.|.++.......+|.+
T Consensus 87 ~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 87 DERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred ECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 556678888887652100111111 113345689999999877777765555555544
No 260
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.54 E-value=3.2 Score=30.72 Aligned_cols=115 Identities=9% Similarity=-0.040 Sum_probs=65.1
Q ss_pred CCeeEEEEeecccccCCC-CeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREARD-PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
..+..++|+ ++ +.++++...++ .+..++..++.. ..... .....+ -..++.+. .+.++++-.
T Consensus 36 ~~~~gi~~d-------~~~~~ly~~d~~~~--~I~~~~~~g~~~-~~~~~-~~~~~p--~~ia~d~~----~~~lyv~d~ 98 (267)
T 1npe_A 36 KVIIGLAFD-------CVDKVVYWTDISEP--SIGRASLHGGEP-TTIIR-QDLGSP--EGIALDHL----GRTIFWTDS 98 (267)
T ss_dssp EEEEEEEEE-------TTTTEEEEEETTTT--EEEEEESSSCCC-EEEEC-TTCCCE--EEEEEETT----TTEEEEEET
T ss_pred CcEEEEEEe-------cCCCEEEEEECCCC--EEEEEecCCCCc-EEEEE-CCCCCc--cEEEEEec----CCeEEEEEC
Confidence 346789998 64 45555555566 677778765532 22211 111221 33367773 355666666
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeC---CCcEEEeeCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDY---QGLIILWSRE 219 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~---d~~i~iwd~~ 219 (223)
..+.|.+++... ..........-.....++++|++..|..+.. .+.|..+++.
T Consensus 99 ~~~~I~~~~~~g---~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 99 QLDRIEVAKMDG---TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp TTTEEEEEETTS---CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCEEEEEEcCC---CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 678899999865 3221112212235688999996554444432 3677777654
No 261
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=90.42 E-value=2.6 Score=36.85 Aligned_cols=115 Identities=10% Similarity=0.033 Sum_probs=58.6
Q ss_pred EEEEeecccccCCCCeEEEEEeCC---CeEEEEEecCCCceEE-eeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 89 CLSWRSWISREARDPTLLVNIAAN---AVCILKVLDKEGAVQL-KRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 89 ~l~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~d~~~~~~~-~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
.+.|+ +|++.|+....+ ....+..+++.++... ...+....... .+...|+| ++.+|+..+.
T Consensus 225 ~~~Ws-------pDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~--~~~~~~Sp-----Dg~~l~~~~~ 290 (751)
T 2xe4_A 225 EIVWG-------PDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLF--SAFMYKAA-----DTNTLCIGSQ 290 (751)
T ss_dssp CCEEC-------SSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTC--EEEEEECT-----TSSEEEEEEE
T ss_pred eEEEe-------cCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCce--EEEEEECC-----CCCEEEEEec
Confidence 57788 888766655432 1124556676654211 01111111122 14347999 7887765442
Q ss_pred ---CCcEEEEEcccCccc--cc--ceeecccccCEEEEEEecCCCEEEEEeCC----CcEEEeeCCC
Q psy3599 165 ---DSCVYFLDIQSKEHK--NA--VNKLQGHACPVLGVSFNYDESLLATSDYQ----GLIILWSREK 220 (223)
Q Consensus 165 ---dg~v~iwd~~~~~~~--~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~~ 220 (223)
...|+++|+.+ + +. .............+.|+..+.+++....+ ..|..+|+.+
T Consensus 291 ~~~~~~l~~~d~~~---~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 291 SPETAEVHLLDLRK---GNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CSSCEEEEEEESSS---CTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCCceEEEEECCC---CCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 33578888876 3 22 22223334455666665544444444443 2466666653
No 262
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.56 E-value=1.7 Score=32.19 Aligned_cols=108 Identities=13% Similarity=0.037 Sum_probs=59.3
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceE-E----eeeeeccccCcceeEEEeeecCcccCCCcEE
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQ-L----KRKFNVNHKSSKYQVRSTFCPIMSFREGACV 159 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~-~----~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l 159 (223)
..+.+++|+ |++.+.+. ..+. ++++ +..+... . .+. .+..+....-...|.| ++.+.
T Consensus 41 ~~~~~laf~-------P~G~LYaV-~~G~--Ly~~-~~~t~~~~~W~~s~t~--IG~~Gw~~F~a~~fD~-----~G~LY 102 (236)
T 1tl2_A 41 SNFKFLFLS-------PGGELYGV-LNDK--IYKG-TPPTHDNDNWMGRAKK--IGNGGWNQFQFLFFDP-----NGYLY 102 (236)
T ss_dssp TTCSEEEEC-------TTSCEEEE-ETTE--EEEE-SCCCSTTCCHHHHCEE--EECSCGGGCSEEEECT-----TSCEE
T ss_pred ccceeEEEC-------CCccEEEE-eCCe--EEEE-CCCCCCcccccccccE--ecccccccceEEEECC-----CCCEE
Confidence 467799999 89998887 5555 4444 4332100 0 001 1221221112225777 68877
Q ss_pred EEecCCCcEEEEEcccCccccccee---e-cccccCEEEEEEecCCCEEEEEeCCCcEE
Q psy3599 160 VTGSEDSCVYFLDIQSKEHKNAVNK---L-QGHACPVLGVSFNYDESLLATSDYQGLII 214 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~~~~~~~~~~~---~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~ 214 (223)
++ .||.|+-++-.+..+..-+.. + ..-=..+..|.+.|+|.+.+.. |+.+.
T Consensus 103 av--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 103 AV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp EE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred Ee--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 77 569888777644111111111 1 1001357899999999988777 66643
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=89.54 E-value=5.7 Score=30.31 Aligned_cols=115 Identities=15% Similarity=0.036 Sum_probs=61.7
Q ss_pred CeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCceEEeeeee--ccccCcceeEEEeeecCcccCCCcEEEEe
Q psy3599 86 PITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAVQLKRKFN--VNHKSSKYQVRSTFCPIMSFREGACVVTG 162 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~--~~h~~~~~~i~~~~s~~~~~~~~~~l~sg 162 (223)
.+..+.+. + ++.++++....+ +..+|..++. +..... .+..... .-...+.+. ++.++++-
T Consensus 81 ~p~gi~~~-------~~~g~l~v~d~~~~---i~~~d~~~g~-~~~~~~~~~~~~~~~-p~~i~~d~~----~G~l~v~d 144 (322)
T 2fp8_A 81 RTYDISYN-------LQNNQLYIVDCYYH---LSVVGSEGGH-ATQLATSVDGVPFKW-LYAVTVDQR----TGIVYFTD 144 (322)
T ss_dssp CEEEEEEE-------TTTTEEEEEETTTE---EEEECTTCEE-CEEEESEETTEECSC-EEEEEECTT----TCCEEEEE
T ss_pred CCceEEEc-------CCCCcEEEEECCCC---EEEEeCCCCE-EEEecccCCCCcccc-cceEEEecC----CCEEEEEC
Confidence 46789998 6 677766655544 4556766553 211110 0111010 022245551 25655553
Q ss_pred cC-----------------CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEE-eCCCcEEEeeCCC
Q psy3599 163 SE-----------------DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATS-DYQGLIILWSREK 220 (223)
Q Consensus 163 s~-----------------dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~~ 220 (223)
.. ++.|+.+|..+ ++...... .-.....++++|++..|..+ +..+.|..|++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~---~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 145 VSTLYDDRGVQQIMDTSDKTGRLIKYDPST---KETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp SCSSCCTTCHHHHHHHTCCCEEEEEEETTT---TEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred CcccccccccceehcccCCCceEEEEeCCC---CEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 22 36688888765 43222111 11234678999999855444 5568899998764
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.47 E-value=1.2 Score=37.75 Aligned_cols=75 Identities=17% Similarity=0.175 Sum_probs=46.7
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCE-EE
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPV-LG 194 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v-~~ 194 (223)
.+..||+.+++.+..... + ... ....... .+.+++.|+.||.++.||.++ ++.+..++...... .-
T Consensus 467 ~l~A~D~~tG~~~W~~~~-~--~~~--~~g~~~t-----agglvf~g~~dg~l~A~D~~t---G~~lW~~~~~~g~~a~P 533 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKE-H--LPL--WAGVLAT-----AGNLVFTGTGDGYFKAFDAKS---GKELWKFQTGSGIVSPP 533 (582)
T ss_dssp EEEEECTTTCCEEEEEEE-S--SCC--CSCCEEE-----TTTEEEEECTTSEEEEEETTT---CCEEEEEECSSCCCSCC
T ss_pred eEEEEECCCCCEEEEecC-C--CCC--cccceEe-----CCCEEEEECCCCcEEEEECCC---CCEEEEecCCCCcccCc
Confidence 577788888876654311 1 111 1011222 467888899999999999999 89888776533311 22
Q ss_pred EEEecCCCE
Q psy3599 195 VSFNYDESL 203 (223)
Q Consensus 195 v~~~~~~~~ 203 (223)
+.|..+|..
T Consensus 534 ~~y~~~G~q 542 (582)
T 1flg_A 534 ITWEQDGEQ 542 (582)
T ss_dssp EEEEETTEE
T ss_pred eEEEECCEE
Confidence 556667763
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=89.19 E-value=2.2 Score=36.09 Aligned_cols=78 Identities=12% Similarity=0.094 Sum_probs=46.2
Q ss_pred EEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccccc-CEEE
Q psy3599 116 ILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHAC-PVLG 194 (223)
Q Consensus 116 ~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~-~v~~ 194 (223)
.+..+|..+++.+...- +.... ....... .+..++.++.||.++.+|.++ ++.+..++.... ...-
T Consensus 445 ~l~a~D~~tG~~~W~~~---~~~~~--~~~~~~t-----~gg~v~~g~~dg~l~a~D~~t---G~~lw~~~~~~~~~~~p 511 (571)
T 2ad6_A 445 QIRAFDLTTGKAKWTKW---EKFAA--WGGTLYT-----KGGLVWYATLDGYLKALDNKD---GKELWNFKMPSGGIGSP 511 (571)
T ss_dssp EEEEECTTTCCEEEEEE---ESSCC--CSBCEEE-----TTTEEEEECTTSEEEEEETTT---CCEEEEEECSSCCCSCC
T ss_pred eEEEEECCCCCEEEEec---CCCCc--cceeEEE-----CCCEEEEEcCCCeEEEEECCC---CCEEEEEeCCCCcEeee
Confidence 56777888887665421 11111 1111222 366777799999999999999 888877764322 1122
Q ss_pred EEEecCCCEEEE
Q psy3599 195 VSFNYDESLLAT 206 (223)
Q Consensus 195 v~~~~~~~~l~s 206 (223)
+.+..++..++.
T Consensus 512 ~~~~~~G~~yv~ 523 (571)
T 2ad6_A 512 MTYSFKGKQYIG 523 (571)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCEEEEE
Confidence 345567665443
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=88.48 E-value=6.7 Score=29.75 Aligned_cols=113 Identities=19% Similarity=0.157 Sum_probs=62.9
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
.....++|+ +++.++++...++ .+..+|..+.. .. .+..+ ..+ ...++.+ +++++++...
T Consensus 32 ~~pegia~~-------~~g~lyv~d~~~~--~I~~~d~~g~~-~~-~~~~~--~~p--~gia~~~-----dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASA-------PDGTIFVTNHEVG--EIVSITPDGNQ-QI-HATVE--GKV--SGLAFTS-----NGDLVATGWN 91 (306)
T ss_dssp CCEEEEEEC-------TTSCEEEEETTTT--EEEEECTTCCE-EE-EEECS--SEE--EEEEECT-----TSCEEEEEEC
T ss_pred CCcceEEEC-------CCCCEEEEeCCCC--eEEEECCCCce-EE-EEeCC--CCc--eeEEEcC-----CCcEEEEecc
Confidence 456789998 8888777766666 67777876542 22 22111 221 2336788 6777666543
Q ss_pred CC--cEEEEEcccCcccccceeec-ccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 165 DS--CVYFLDIQSKEHKNAVNKLQ-GHACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 165 dg--~v~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
.. .|..+|..+ ++...... ........++..+++..+++-..++.|..+|...
T Consensus 92 ~~~~~v~~~d~~~---g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 92 ADSIPVVSLVKSD---GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp TTSCEEEEEECTT---SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred CCcceEEEEcCCC---CeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 22 466667666 44322111 1122234444444444455544578888888653
No 267
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.01 E-value=13 Score=32.50 Aligned_cols=116 Identities=8% Similarity=-0.006 Sum_probs=65.6
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeec---cccCcceeEEE-eeecCcccCCCcEEE
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNV---NHKSSKYQVRS-TFCPIMSFREGACVV 160 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~---~h~~~~~~i~~-~~s~~~~~~~~~~l~ 160 (223)
..|.++... ++|.+-+....++ +..++..++....-.... +-.... +.+ ...+ ++. |-
T Consensus 310 ~~i~~i~~D-------~~g~lWigt~~~G---l~~~~~~~~~~~~~~~~~~~~~l~~~~--V~~i~~d~-----~g~-lW 371 (795)
T 4a2l_A 310 RSVRSIFMD-------SQGGMWLGTYFGG---LNYYHPIRNRFKNIRNIPYKNSLSDNV--VSCIVEDK-----DKN-LW 371 (795)
T ss_dssp SCEEEEEEC-------TTSCEEEEESSSC---EEEECGGGGSSEEECCCTTSSSCSCSS--EEEEEECT-----TSC-EE
T ss_pred CcEEEEEEe-------CCcCEEEEECCCC---eEEeCCCcccceEEcCCCCCCCCCCCe--eEEEEECC-----CCC-EE
Confidence 467788877 7777666555566 445565544221100000 101111 555 3343 444 44
Q ss_pred EecCCCcEEEEEcccCcccccceeec--------ccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 161 TGSEDSCVYFLDIQSKEHKNAVNKLQ--------GHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 161 sgs~dg~v~iwd~~~~~~~~~~~~~~--------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.|+.++-+..||..+ +....... .....|.++...+++..|-.|+.++-+..||.+++
T Consensus 372 iGt~~~Gl~~~~~~~---~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 372 IGTNDGGLNLYNPIT---QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEESSSCEEEECTTT---CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred EEECCCCeEEEcCCC---CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 577776688899876 43222111 12356899988888884555666667888887764
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.71 E-value=7.7 Score=29.55 Aligned_cols=117 Identities=5% Similarity=0.011 Sum_probs=63.6
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeecc-----------------ccCcceeEEEeee
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVN-----------------HKSSKYQVRSTFC 148 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~-----------------h~~~~~~i~~~~s 148 (223)
...+++|. +++.++.++..++ .+..|+..++.......... ....+ ...++.
T Consensus 20 ~p~~i~~d-------~~g~~l~v~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p--~gi~~~ 88 (322)
T 2fp8_A 20 APNSFTFD-------STNKGFYTSVQDG--RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRT--YDISYN 88 (322)
T ss_dssp CCCCEECC-------TTCSSEEEECTTS--EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCE--EEEEEE
T ss_pred CceEEEEc-------CCCCEEEEEcCCC--eEEEECCCCCceEEEecccccccccccccccchhccccCCCC--ceEEEc
Confidence 45678888 8888666666666 56677877653221110000 00111 233566
Q ss_pred cCcccCCCcEEEEecCCCcEEEEEcccCccccc--cee-ecc-cccCEEEEEEec-CCCEEEEEeC--------------
Q psy3599 149 PIMSFREGACVVTGSEDSCVYFLDIQSKEHKNA--VNK-LQG-HACPVLGVSFNY-DESLLATSDY-------------- 209 (223)
Q Consensus 149 ~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~--~~~-~~~-h~~~v~~v~~~~-~~~~l~s~s~-------------- 209 (223)
+. ++.++++ ...+.+..+|..+ ++. +.. ..+ .......+++.+ +|++.++-..
T Consensus 89 ~~----~g~l~v~-d~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 89 LQ----NNQLYIV-DCYYHLSVVGSEG---GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp TT----TTEEEEE-ETTTEEEEECTTC---EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CC----CCcEEEE-ECCCCEEEEeCCC---CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 52 3555554 3344478888765 432 111 111 113468899999 8987776532
Q ss_pred ---CCcEEEeeCCCC
Q psy3599 210 ---QGLIILWSREKH 221 (223)
Q Consensus 210 ---d~~i~iwd~~~~ 221 (223)
++.|..||..++
T Consensus 161 ~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTK 175 (322)
T ss_dssp TCCCEEEEEEETTTT
T ss_pred cCCCceEEEEeCCCC
Confidence 366888886543
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=87.06 E-value=11 Score=30.51 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=61.3
Q ss_pred CeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCc-EEEEec
Q psy3599 86 PITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGA-CVVTGS 163 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~-~l~sgs 163 (223)
....++++ | +...|..+.... .+..+|+.++. +.... .....+ ...++++ +++ ++++..
T Consensus 138 ~P~~lavd-------p~~~g~Lyv~d~~~--~I~~id~~~~~-v~~~~--~~~~~P--~~ia~d~-----~G~~lyvad~ 198 (430)
T 3tc9_A 138 GAVWLSFD-------PKNHNHLYLVGEQH--PTRLIDFEKEY-VSTVY--SGLSKV--RTICWTH-----EADSMIITND 198 (430)
T ss_dssp CCCEEEEE-------TTEEEEEEEEEBTE--EEEEEETTTTE-EEEEE--CCCSCE--EEEEECT-----TSSEEEEEEC
T ss_pred CCCEEEEC-------CCCCCeEEEEeCCC--cEEEEECCCCE-EEEEe--cCCCCc--ceEEEeC-----CCCEEEEEeC
Confidence 45678888 6 344454444433 67778887764 32221 222222 4447888 677 455544
Q ss_pred CCC----cEEEEEcccCcccccc--eeecccccCEEEEEEec-CCCEEEEEeCCCcEEEeeCCCC
Q psy3599 164 EDS----CVYFLDIQSKEHKNAV--NKLQGHACPVLGVSFNY-DESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 164 ~dg----~v~iwd~~~~~~~~~~--~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.++ .+...+. . +... ..+.. -.....++++| ++.++++-..++.|..++...+
T Consensus 199 ~~~~~~~~v~~~~~-~---g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 199 QNNNDRPNNYILTR-E---SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp CSCTTSEEEEEEEG-G---GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred CCCcccceEEEEeC-C---Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 322 2333333 3 2222 22221 22346678899 6777777667788988887643
No 270
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.32 E-value=8.2 Score=28.43 Aligned_cols=115 Identities=12% Similarity=0.025 Sum_probs=64.2
Q ss_pred CCeeEEEEeecccccCCC-CeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREARD-PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
.....++++ ++ +.++++...+. .+.+++.+... .......+ ...+ ...+++|. ++.++++..
T Consensus 79 ~~p~~ia~d-------~~~~~lyv~d~~~~--~I~~~~~~g~~-~~~~~~~~-~~~P--~~i~vd~~----~g~lyv~~~ 141 (267)
T 1npe_A 79 GSPEGIALD-------HLGRTIFWTDSQLD--RIEVAKMDGTQ-RRVLFDTG-LVNP--RGIVTDPV----RGNLYWTDW 141 (267)
T ss_dssp CCEEEEEEE-------TTTTEEEEEETTTT--EEEEEETTSCS-CEEEECSS-CSSE--EEEEEETT----TTEEEEEEC
T ss_pred CCccEEEEE-------ecCCeEEEEECCCC--EEEEEEcCCCC-EEEEEECC-CCCc--cEEEEeeC----CCEEEEEEC
Confidence 467889998 65 45555555555 56677766432 11111111 1222 33468873 244444443
Q ss_pred C--CCcEEEEEcccCcccccceee-cccccCEEEEEEecCCCEE-EEEeCCCcEEEeeCCC
Q psy3599 164 E--DSCVYFLDIQSKEHKNAVNKL-QGHACPVLGVSFNYDESLL-ATSDYQGLIILWSREK 220 (223)
Q Consensus 164 ~--dg~v~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~ 220 (223)
. .+.|..++... .. ...+ ...-.....+++++++..| ++-...+.|..+|+..
T Consensus 142 ~~~~~~I~~~~~dg---~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 142 NRDNPKIETSHMDG---TN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp CSSSCEEEEEETTS---CC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CCCCcEEEEEecCC---CC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 3 36788888764 22 2222 1222356889999986655 4555567899888753
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=86.06 E-value=5.2 Score=30.40 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=43.3
Q ss_pred eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCC--cEEEeeCCCC
Q psy3599 146 TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQG--LIILWSREKH 221 (223)
Q Consensus 146 ~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~ 221 (223)
+|++ ++.++++-..++.|..||... .. ...+. -......+++.++++++++..... .|..+|..++
T Consensus 38 a~~~-----~g~lyv~d~~~~~I~~~d~~g---~~-~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 38 ASAP-----DGTIFVTNHEVGEIVSITPDG---NQ-QIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp EECT-----TSCEEEEETTTTEEEEECTTC---CE-EEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred EECC-----CCCEEEEeCCCCeEEEECCCC---ce-EEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 6777 688888877888999998765 32 22222 124578899999998766654332 3656665554
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=85.56 E-value=13 Score=30.07 Aligned_cols=114 Identities=10% Similarity=0.122 Sum_probs=65.1
Q ss_pred eEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCc-EEEEecCC
Q psy3599 88 TCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGA-CVVTGSED 165 (223)
Q Consensus 88 ~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~-~l~sgs~d 165 (223)
..++++ + ++.++++-..++ .+..++..++......+..+..... ...+++| +++ ++++-...
T Consensus 231 ~giavd-------~~~G~lyv~d~~~~--~V~~~d~~~g~~~~~~~~~~~~~~~--~~ia~dp-----dG~~LYvad~~~ 294 (433)
T 4hw6_A 231 KTCAVH-------PQNGKIYYTRYHHA--MISSYDPATGTLTEEEVMMDTKGSN--FHIVWHP-----TGDWAYIIYNGK 294 (433)
T ss_dssp CCCEEC-------TTTCCEEECBTTCS--EEEEECTTTCCEEEEEEECSCCSSC--EEEEECT-----TSSEEEEEETTT
T ss_pred CEEEEe-------CCCCeEEEEECCCC--EEEEEECCCCeEEEEEeccCCCCCc--ccEEEeC-----CCCEEEEEeCCC
Confidence 446666 5 677766665666 6777788766442322222222222 3347888 677 66666667
Q ss_pred CcEEEEEcccCccccc--ceeeccc---------------ccCEEEEEE---------ecCCCEEEEEeCCCcEEEeeC
Q psy3599 166 SCVYFLDIQSKEHKNA--VNKLQGH---------------ACPVLGVSF---------NYDESLLATSDYQGLIILWSR 218 (223)
Q Consensus 166 g~v~iwd~~~~~~~~~--~~~~~~h---------------~~~v~~v~~---------~~~~~~l~s~s~d~~i~iwd~ 218 (223)
+.|+.++..... +.. ...+.+. -.....+++ .+++.+.++-...+.|+.++.
T Consensus 295 ~~I~~~~~d~~~-~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 295 HCIYRVDYNRET-GKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TEEEEEEBCTTT-CCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CEEEEEeCCCCC-cccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 889998865200 211 1111110 113566888 666777777666778888874
No 273
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=83.89 E-value=14 Score=28.97 Aligned_cols=115 Identities=7% Similarity=-0.004 Sum_probs=66.8
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeecccc--Cc-ceeEEE-ee---ecCcccCCCcE
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHK--SS-KYQVRS-TF---CPIMSFREGAC 158 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~--~~-~~~i~~-~~---s~~~~~~~~~~ 158 (223)
-..++.|. +.++.++++.-.++ .|..|+...+......+. +-. .. ...... .+ .| ++.+
T Consensus 14 yPE~~~wd------~~~g~~~vs~l~~g--~V~~~~~~~~~~~~~~~~-~~s~~g~~~~~~sGl~~~~~D~-----~grL 79 (334)
T 2p9w_A 14 TPEDTIYD------RTRQVFYQSNLYKG--RIEVYNPKTQSHFNVVID-GASSNGDGEQQMSGLSLLTHDN-----SKRL 79 (334)
T ss_dssp CCSCEEEE------TTTTEEEEEETTTT--EEEEECTTTCCEEEECCT-TTCCSSCCSEEEEEEEESSSSS-----CCEE
T ss_pred CCcCccCc------CCCCEEEEEeccCC--EEEEEcCCCCeEEEEecC-CccccCCCcceeeEEEEeccCC-----CCcE
Confidence 34578887 23555555555677 788889875543332322 211 11 111222 56 46 5666
Q ss_pred EEEec-------------CCCcEEEEEcc---cCcccccceeec--cc----------c-cCEEEEEEecCCCEEEEEeC
Q psy3599 159 VVTGS-------------EDSCVYFLDIQ---SKEHKNAVNKLQ--GH----------A-CPVLGVSFNYDESLLATSDY 209 (223)
Q Consensus 159 l~sgs-------------~dg~v~iwd~~---~~~~~~~~~~~~--~h----------~-~~v~~v~~~~~~~~l~s~s~ 209 (223)
+++.. .+..|..+|+. + ++.+.... +. . .....++..++|+..++++.
T Consensus 80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~t---g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~ 156 (334)
T 2p9w_A 80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSEN---SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL 156 (334)
T ss_dssp EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTT---CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEcccccccccccccCCCCEEEEEcCCcCCC---CCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC
Confidence 66533 15779999998 6 55443332 11 1 24789999999999988876
Q ss_pred C-CcEEEee
Q psy3599 210 Q-GLIILWS 217 (223)
Q Consensus 210 d-~~i~iwd 217 (223)
. +.|...+
T Consensus 157 ~~~~I~rV~ 165 (334)
T 2p9w_A 157 GMPAIARVS 165 (334)
T ss_dssp SSCEEEEEC
T ss_pred CCCeEEEEe
Confidence 6 5544433
No 274
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=83.57 E-value=5.2 Score=34.09 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=37.1
Q ss_pred EEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec------CCCcEEEEEcccCccc
Q psy3599 106 LVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS------EDSCVYFLDIQSKEHK 179 (223)
Q Consensus 106 l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs------~dg~v~iwd~~~~~~~ 179 (223)
|+.++.++ .+..+|..+|+.+...-...+.. .+.+. -+|.. .+..++.++ .+|.|+.+|..+ +
T Consensus 124 V~v~t~dg--~l~AlDa~TG~~~W~~~~~~~~~-~~~~~--ssP~v---~~g~V~vg~~g~e~g~~g~v~A~D~~T---G 192 (599)
T 1w6s_A 124 ILKTQLDG--NVAALNAETGETVWKVENSDIKV-GSTLT--IAPYV---VKDKVIIGSSGAELGVRGYLTAYDVKT---G 192 (599)
T ss_dssp EEEECTTS--EEEEEETTTCCEEEEEECCCGGG-TCBCC--SCCEE---ETTEEEECCBCGGGTCCCEEEEEETTT---C
T ss_pred EEEEcCCC--EEEEEECCCCCEEEeecCCCCCc-cceee--cCCEE---ECCEEEEEecccccCCCCeEEEEECCC---C
Confidence 55566566 56667888887776432111110 00011 11211 133455554 378999999998 7
Q ss_pred ccceee
Q psy3599 180 NAVNKL 185 (223)
Q Consensus 180 ~~~~~~ 185 (223)
+.+-.+
T Consensus 193 ~~~W~~ 198 (599)
T 1w6s_A 193 EQVWRA 198 (599)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 765544
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=82.84 E-value=23 Score=30.81 Aligned_cols=137 Identities=12% Similarity=0.104 Sum_probs=72.9
Q ss_pred CcEEEEEECCCCceeeee-------------eeee------cCCCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEe
Q psy3599 60 GVIVSILCDDLGRLSKGK-------------RLVL------SQDCPITCLSWRSWISREARDPTLLVNIAANAVCILKVL 120 (223)
Q Consensus 60 ~~i~~~~~~~~~~~~~~~-------------~~~~------~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~ 120 (223)
+.|.++..+++|.++... .+.. -....|.++... .++.+.+....++ +..+
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d-------~~g~lWigt~~~G---l~~~ 432 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKD-------SEGNLWFGTYLGN---ISYY 432 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEEC-------TTSCEEEEETTEE---EEEE
T ss_pred cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEEC-------CCCCEEEEeccCC---EEEE
Confidence 457777777777776432 0100 002457777766 6777666443345 4566
Q ss_pred cCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeeccc-----ccCEEE
Q psy3599 121 DKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGH-----ACPVLG 194 (223)
Q Consensus 121 d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h-----~~~v~~ 194 (223)
+..++.... ....+..... +.+ ...+ ++.+.+ |+.. -+..+|..+ ++........ ...|.+
T Consensus 433 ~~~~~~~~~-~~~~~~~~~~--v~~i~~d~-----~g~lwi-gt~~-Gl~~~~~~~---~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 433 NTRLKKFQI-IELEKNELLD--VRVFYEDK-----NKKIWI-GTHA-GVFVIDLAS---KKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp CSSSCEEEE-CCSTTTCCCC--EEEEEECT-----TSEEEE-EETT-EEEEEESSS---SSCCEEECTTTSSCSCSCEEE
T ss_pred cCCCCcEEE-eccCCCCCCe--EEEEEECC-----CCCEEE-EECC-ceEEEeCCC---CeEEecccCcccccccceeEE
Confidence 776664322 1100111111 444 3343 355444 4554 488888876 4432222111 357899
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 195 VSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 195 v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
+...++|.+.+....+| +..||..+
T Consensus 500 i~~d~~g~lWigt~~~G-l~~~~~~~ 524 (781)
T 3v9f_A 500 IAQDSEGRFWIGTFGGG-VGIYTPDM 524 (781)
T ss_dssp EEECTTCCEEEEESSSC-EEEECTTC
T ss_pred EEEcCCCCEEEEEcCCC-EEEEeCCC
Confidence 98888888665543344 66677654
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=82.65 E-value=2.3 Score=36.42 Aligned_cols=64 Identities=13% Similarity=0.076 Sum_probs=42.9
Q ss_pred CCcEEEEecCCC-----------cEEEEEcccCccccc--ceeecc-cccCEEEEEEecCCCEEEEEeC-CCcEEEeeCC
Q psy3599 155 EGACVVTGSEDS-----------CVYFLDIQSKEHKNA--VNKLQG-HACPVLGVSFNYDESLLATSDY-QGLIILWSRE 219 (223)
Q Consensus 155 ~~~~l~sgs~dg-----------~v~iwd~~~~~~~~~--~~~~~~-h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~ 219 (223)
++.+++.|+.+. .+.+||..+ .+. +..+.. +.....++++..++.+++.|+. +..+.+||..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t---~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~ 273 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPST---GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSS 273 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTT---CCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCC---CcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCc
Confidence 577888877543 578899887 432 222321 3333445677889999999984 5679999986
Q ss_pred CC
Q psy3599 220 KH 221 (223)
Q Consensus 220 ~~ 221 (223)
+.
T Consensus 274 t~ 275 (656)
T 1k3i_A 274 SD 275 (656)
T ss_dssp GT
T ss_pred CC
Confidence 53
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=82.22 E-value=18 Score=29.18 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=59.2
Q ss_pred CeeEEEEeecccccCCC---CeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEe
Q psy3599 86 PITCLSWRSWISREARD---PTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTG 162 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~---~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sg 162 (223)
....++|+ ++ +.++++-.. . .++.+|+.++... .. ......+ ...++++ ++.++++-
T Consensus 140 ~P~gvavd-------~~s~~g~Lyv~D~~-~--~I~~id~~~g~v~-~~--~~~~~~P--~giavd~-----dG~lyVad 199 (433)
T 4hw6_A 140 NIWRMMFD-------PNSNYDDLYWVGQR-D--AFRHVDFVNQYVD-IK--TTNIGQC--ADVNFTL-----NGDMVVVD 199 (433)
T ss_dssp CCCEEEEC-------TTTTTCEEEEECBT-S--CEEEEETTTTEEE-EE--CCCCSCE--EEEEECT-----TCCEEEEE
T ss_pred CCceEEEc-------cccCCCEEEEEeCC-C--CEEEEECCCCEEE-Ee--ecCCCCc--cEEEECC-----CCCEEEEc
Confidence 45688898 63 565555433 4 5677788766433 22 1222222 3337888 67766654
Q ss_pred cCC---Cc-EEEEEcccCcccccc-eeecccccCEEEEEEec-CCCEEEEEeCCCcEEEeeCCCC
Q psy3599 163 SED---SC-VYFLDIQSKEHKNAV-NKLQGHACPVLGVSFNY-DESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 163 s~d---g~-v~iwd~~~~~~~~~~-~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
... .. +...+... .... ..+. .-.....++++| ++.+.++-..++.|+.+|..++
T Consensus 200 ~~~~~~~~gv~~~~~~~---~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 200 DQSSDTNTGIYLFTRAS---GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp CCSCTTSEEEEEECGGG---TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred CCCCcccceEEEEECCC---Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence 321 11 22233222 1110 1111 122345678888 6776666666778888887644
No 278
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=81.56 E-value=22 Score=29.55 Aligned_cols=66 Identities=14% Similarity=0.120 Sum_probs=42.5
Q ss_pred eeecCcccCCCcEEEEecCCCcEEEEEcc-------cCccccc-----------ceee-c-ccccCEEEEEEecCCCE-E
Q psy3599 146 TFCPIMSFREGACVVTGSEDSCVYFLDIQ-------SKEHKNA-----------VNKL-Q-GHACPVLGVSFNYDESL-L 204 (223)
Q Consensus 146 ~~s~~~~~~~~~~l~sgs~dg~v~iwd~~-------~~~~~~~-----------~~~~-~-~h~~~v~~v~~~~~~~~-l 204 (223)
+.+|. ++.++++-..++.|+.+|+. + +.. +..+ . +.......++|+|+++. .
T Consensus 253 avdp~----~g~LYvtd~~~g~V~r~d~~~~~~~~~t---g~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lY 325 (496)
T 3kya_A 253 TIHPI----NGELYFNSYEKGQVFRLDLVDYFKTIKN---GGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAY 325 (496)
T ss_dssp EECTT----TCCEEEEETTTTEEEEECHHHHHHHHHT---TCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred EEcCC----CCeEEEEECCCCEEEEEecccccccccC---ceeecccccccccccceeEecCCCCCceEEEEcCCCCEEE
Confidence 45664 56777788888899999987 4 332 1111 1 12234578999999995 4
Q ss_pred EEEeCCCcEEEeeC
Q psy3599 205 ATSDYQGLIILWSR 218 (223)
Q Consensus 205 ~s~s~d~~i~iwd~ 218 (223)
++-+....|+.++.
T Consensus 326 vaD~~~h~I~kid~ 339 (496)
T 3kya_A 326 FGVINNHYFMRSDY 339 (496)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEec
Confidence 44455677887553
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=78.38 E-value=22 Score=27.67 Aligned_cols=117 Identities=10% Similarity=-0.072 Sum_probs=65.3
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
...+..++|+ +.++.++++-..++ .|..++..++.. ......+- ..+ ...++.+. ++.++++-.
T Consensus 72 ~~~~~~l~~d------~~~~~ly~~D~~~~--~I~r~~~~g~~~-~~~~~~~~-~~p--~glavd~~----~g~ly~~d~ 135 (349)
T 3v64_C 72 LENAIALDFH------HRRELVFWSDVTLD--RILRANLNGSNV-EEVVSTGL-ESP--GGLAVDWV----HDKLYWTDS 135 (349)
T ss_dssp CSCEEEEEEE------TTTTEEEEEETTTT--EEEEEETTSCSC-EEEECSSC-SCC--CEEEEETT----TTEEEEEET
T ss_pred CCceEEEEEe------ccccEEEEEeccCC--ceEEEecCCCCc-eEEEeCCC-CCc--cEEEEecC----CCeEEEEcC
Confidence 4557899998 23455555554555 566667665432 11111111 121 22345553 466777777
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCC-EEEEEeCC-CcEEEeeCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDES-LLATSDYQ-GLIILWSRE 219 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~ 219 (223)
..+.|.+.+... ......+...-.....++++|.+. ++.+-... +.|...++.
T Consensus 136 ~~~~I~~~~~dG---~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 136 GTSRIEVANLDG---AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp TTTEEEEEETTS---CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCeEEEEcCCC---CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 778899988775 332222222234568899998654 44444444 667777654
No 280
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=77.69 E-value=35 Score=29.69 Aligned_cols=114 Identities=9% Similarity=0.019 Sum_probs=60.6
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs 163 (223)
..|.++... .++.+.+....++ +..++..++.... ... ........+.+ ...+ ++.+. .|+
T Consensus 363 ~~v~~i~~d-------~~g~lWigt~~~G---l~~~~~~~~~~~~-~~~-~~~~~~~~v~~i~~d~-----~g~lW-igt 424 (781)
T 3v9f_A 363 KVVSSVCDD-------GQGKLWIGTDGGG---INVFENGKRVAIY-NKE-NRELLSNSVLCSLKDS-----EGNLW-FGT 424 (781)
T ss_dssp SCEEEEEEC-------TTSCEEEEEBSSC---EEEEETTEEEEEC-C------CCCSBEEEEEECT-----TSCEE-EEE
T ss_pred cceEEEEEc-------CCCCEEEEeCCCc---EEEEECCCCeEEE-ccC-CCCCCCcceEEEEECC-----CCCEE-EEe
Confidence 357777776 6777665544566 4455665443221 110 00001111444 3333 35544 466
Q ss_pred CCCcEEEEEcccCcccccceee--cccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKL--QGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
.++-+..+|..+ ++..... ......|.++...+++.+.+.. . +-+..||..++
T Consensus 425 ~~~Gl~~~~~~~---~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~ 479 (781)
T 3v9f_A 425 YLGNISYYNTRL---KKFQIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASK 479 (781)
T ss_dssp TTEEEEEECSSS---CEEEECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSS
T ss_pred ccCCEEEEcCCC---CcEEEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCC
Confidence 666688888776 4322111 1134578898888777765544 3 45888887654
No 281
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=77.69 E-value=16 Score=27.50 Aligned_cols=104 Identities=2% Similarity=-0.057 Sum_probs=52.4
Q ss_pred CeEEEEEeCCCeEEEEEecCCCceEEee-eeeccccCcceeEEEeeecCcccCCCcEEEEecCC----CcEEEEEcccCc
Q psy3599 103 PTLLVNIAANAVCILKVLDKEGAVQLKR-KFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSED----SCVYFLDIQSKE 177 (223)
Q Consensus 103 ~~~l~~~~~~~~~~v~i~d~~~~~~~~~-~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~d----g~v~iwd~~~~~ 177 (223)
+.+++.|+.+....+.+||..++.-... .++ ..... ..+ ... ++.+++.|+.+ ..+.+||..+
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~---~~~-~~~-----~~~lyv~GG~~~~~~~~~~~~d~~~-- 79 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPF-EKRRD---AAC-VFW-----DNVVYILGGSQLFPIKRMDCYNVVK-- 79 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCS-CCCBS---CEE-EEE-----TTEEEEECCBSSSBCCEEEEEETTT--
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCC-cccce---eEE-EEE-----CCEEEEEeCCCCCCcceEEEEeCCC--
Confidence 4556666643222467788887643221 111 11111 111 112 57778888755 5678888877
Q ss_pred cccc--ceeecccccCEEEEEEecCCCEEEEEeCC------CcEEEeeCCCC
Q psy3599 178 HKNA--VNKLQGHACPVLGVSFNYDESLLATSDYQ------GLIILWSREKH 221 (223)
Q Consensus 178 ~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~~~~ 221 (223)
.+. +..+......-..+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 80 -~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 80 -DSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp -TEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred -CeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 332 2222211111122222 66777787755 45888887654
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=76.13 E-value=22 Score=26.56 Aligned_cols=119 Identities=10% Similarity=0.094 Sum_probs=60.4
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceE--Eeeeeecc----ccCcceeEEE-eeecCcccCCCc
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQ--LKRKFNVN----HKSSKYQVRS-TFCPIMSFREGA 157 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~--~~~~~~~~----h~~~~~~i~~-~~s~~~~~~~~~ 157 (223)
.-...|++. +++.++++.-.+. .+.+++...... .......+ ..+.. ... +|.| .++
T Consensus 70 ~D~EGIa~~-------~~g~~~vs~E~~~--~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g--~EGLA~d~-----~~~ 133 (255)
T 3qqz_A 70 KDLETIEYI-------GDNQFVISDERDY--AIYVISLTPNSEVKILKKIKIPLQESPTNCG--FEGLAYSR-----QDH 133 (255)
T ss_dssp SSEEEEEEC-------STTEEEEEETTTT--EEEEEEECTTCCEEEEEEEECCCSSCCCSSC--CEEEEEET-----TTT
T ss_pred CChHHeEEe-------CCCEEEEEECCCC--cEEEEEcCCCCeeeeeeeeccccccccccCC--cceEEEeC-----CCC
Confidence 456678887 7887766654444 344554432221 11111111 11121 444 7888 565
Q ss_pred EEEEecCCCcEEEEEcccCcccccceeec-------ccccCEEEEEEecC-CCEEEEEeCCCcEEEeeCC
Q psy3599 158 CVVTGSEDSCVYFLDIQSKEHKNAVNKLQ-------GHACPVLGVSFNYD-ESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 158 ~l~sgs~dg~v~iwd~~~~~~~~~~~~~~-------~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~ 219 (223)
.|+++.+.....+|.++.......+..+. .+.....+++++|. +.+++....++.+.++|..
T Consensus 134 ~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 134 TFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp EEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred EEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC
Confidence 66666665555555554100011111111 12234688999997 5555666666777777754
No 283
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=75.48 E-value=4.8 Score=31.66 Aligned_cols=109 Identities=9% Similarity=0.111 Sum_probs=56.4
Q ss_pred eEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEe-cCCCcEEEEEcccCcccccc
Q psy3599 104 TLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTG-SEDSCVYFLDIQSKEHKNAV 182 (223)
Q Consensus 104 ~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sg-s~dg~v~iwd~~~~~~~~~~ 182 (223)
.+++.++.|+ .+.-.|.++|+.+...-. ...... +... .+.. ..++..++.. +.||.++.++..+ +...
T Consensus 11 ~~V~v~t~dG--~l~Ald~~tG~~~W~~~~-~~~~p~--~~~~-~~~~-~~~~~~~vv~p~~dG~l~a~~~~~---G~~~ 80 (339)
T 2be1_A 11 DILIAADVEG--GLHAVDRRNGHIIWSIEP-ENFQPL--IEIQ-EPSR-LETYETLIIEPFGDGNIYYFNAHQ---GLQK 80 (339)
T ss_dssp EEEEEEETTS--CEEEEETTTTEEEEEECG-GGSCCS--EECC-CSCT-TTSSEEEEECCSTTTEEEEEETTT---EEEE
T ss_pred CEEEEEeCCC--eEEEEECCCCcEEEEecC-CccCCc--EEec-CCcc-ccCCcEEEEEECCCCEEEEEECCC---CcEE
Confidence 4555556556 566668888877765321 211222 3211 1110 0123444443 6899999999877 5332
Q ss_pred eeecc----cccCEEE---EEE-e----cCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 183 NKLQG----HACPVLG---VSF-N----YDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 183 ~~~~~----h~~~v~~---v~~-~----~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
..+.. ...++.. ... . ..+..+.+|+.++.+...|+++|+
T Consensus 81 ~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 81 LPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp EEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred eeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 22211 1112211 000 0 035567888889999888888876
No 284
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=74.94 E-value=22 Score=26.56 Aligned_cols=62 Identities=21% Similarity=0.225 Sum_probs=36.0
Q ss_pred CCcEEEEecCC-----CcEEEEEcccCccccc--ceeecccccCEEEEEEecCCCEEEEEeCC-----CcEEEeeCCCC
Q psy3599 155 EGACVVTGSED-----SCVYFLDIQSKEHKNA--VNKLQGHACPVLGVSFNYDESLLATSDYQ-----GLIILWSREKH 221 (223)
Q Consensus 155 ~~~~l~sgs~d-----g~v~iwd~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 221 (223)
++.+++.|+.+ ..+.+||..+ .+- +..+........++.+ ++.+++.|+.+ ..+.+||+++.
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRT---DSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTT---TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCC---CcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 57778888764 4688999887 332 2222211112222222 66777888755 35778888654
No 285
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=73.95 E-value=29 Score=26.98 Aligned_cols=113 Identities=13% Similarity=0.102 Sum_probs=54.5
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
......++|. ++|.++++-.. + .|.+++ .........+...........-.+++|.... ++.++++-.
T Consensus 30 l~~P~~ia~~-------pdG~l~V~e~~-g--~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~-~g~lYv~~~ 97 (352)
T 2ism_A 30 LEVPWALAFL-------PDGGMLIAERP-G--RIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQ-EPYVYAYRT 97 (352)
T ss_dssp CSCEEEEEEC-------TTSCEEEEETT-T--EEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTT-SCEEEEEEE
T ss_pred CCCceEEEEc-------CCCeEEEEeCC-C--eEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCC-CCEEEEEEe
Confidence 3456799999 99997777555 4 455555 2211111110000111111144478882100 134444443
Q ss_pred CC-----CcEEEEEcccCc--ccc-cceeec---ccccCEEEEEEecCCCEEEEEe
Q psy3599 164 ED-----SCVYFLDIQSKE--HKN-AVNKLQ---GHACPVLGVSFNYDESLLATSD 208 (223)
Q Consensus 164 ~d-----g~v~iwd~~~~~--~~~-~~~~~~---~h~~~v~~v~~~~~~~~l~s~s 208 (223)
.. +.|..++..... ..+ .+..+. +.......+.|.|+|.+.++.+
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 32 567777765300 011 222233 1111236799999998777754
No 286
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=73.87 E-value=31 Score=27.22 Aligned_cols=117 Identities=10% Similarity=-0.058 Sum_probs=64.1
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
...+..++|. +.++.++++-..++ .|..++..++.. ......+- ..+ ...++.+. .+.++++-.
T Consensus 115 ~~~~~gl~~d------~~~~~ly~~D~~~~--~I~r~~~~g~~~-~~~~~~~~-~~p--~glavd~~----~g~lY~~d~ 178 (386)
T 3v65_B 115 LENAIALDFH------HRRELVFWSDVTLD--RILRANLNGSNV-EEVVSTGL-ESP--GGLAVDWV----HDKLYWTDS 178 (386)
T ss_dssp CSCEEEEEEE------TTTTEEEEEETTTT--EEEEEETTSCCE-EEEECSSC-SCC--CCEEEETT----TTEEEEEET
T ss_pred CCccEEEEEe------cCCCeEEEEeCCCC--cEEEEecCCCCc-EEEEeCCC-CCc--cEEEEEeC----CCeEEEEcC
Confidence 4567789998 23455555555556 666677765532 22211111 111 22245553 466667777
Q ss_pred CCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEe-CC-CcEEEeeCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSD-YQ-GLIILWSRE 219 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d-~~i~iwd~~ 219 (223)
..+.|.+.++.. ......+...-.....++++|.+..|..+. .. +.|...++.
T Consensus 179 ~~~~I~~~~~dg---~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 179 GTSRIEVANLDG---AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp TTTEEEECBTTS---CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCeEEEEeCCC---CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 777888887765 322222222234568899998655444433 33 567766654
No 287
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=72.27 E-value=30 Score=26.34 Aligned_cols=116 Identities=8% Similarity=-0.049 Sum_probs=61.3
Q ss_pred CCCeeEEEEeecccccCCC-CeEEEEEeCCCeEEEEEecCCCc---eEEeeeeeccccCcceeEEEeeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARD-PTLLVNIAANAVCILKVLDKEGA---VQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~d~~~~---~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l 159 (223)
...+..++|+ +. +.++++-..++ .|..++..+. ......+. .....+ -..++.+. ++.++
T Consensus 29 ~~~p~g~~~d-------~~~~~ly~~D~~~~--~I~~~~~~g~~~~~~~~~~~~-~~~~~p--~glavd~~----~~~ly 92 (316)
T 1ijq_A 29 LRNVVALDTE-------VASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVIS-RDIQAP--DGLAVDWI----HSNIY 92 (316)
T ss_dssp CSSEEEEEEE-------TTTTEEEEEETTTT--EEEEEEC--------CEEEEC-SSCSCC--CEEEEETT----TTEEE
T ss_pred CCceEEEEEE-------eCCCEEEEEECCCC--cEEEEECCCCCCCcccEEEEe-CCCCCc--CEEEEeec----CCeEE
Confidence 4567899998 54 45555655556 5666676641 11121111 111121 22245542 45666
Q ss_pred EEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeC-C-CcEEEeeC
Q psy3599 160 VTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDY-Q-GLIILWSR 218 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d-~~i~iwd~ 218 (223)
++-...+.|.+.+... ......+...-.....++++|.+..|..+.. . +.|...++
T Consensus 93 ~~d~~~~~I~~~~~~g---~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 93 WTDSVLGTVSVADTKG---VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp EEETTTTEEEEEETTS---SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEECCCCEEEEEeCCC---CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 7767778899998765 3222222222245688999986554443333 2 56766665
No 288
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.10 E-value=54 Score=29.62 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=23.9
Q ss_pred CCcEEEEecCCCcEEEEEcccCcccccceee
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHKNAVNKL 185 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~ 185 (223)
+..++++-+.|+.+++|++.+ ++++.+.
T Consensus 246 ~~~~lftl~~D~~LRiWsl~t---~~~v~t~ 273 (950)
T 4gq2_M 246 TYNVLVMLSLDYKLKVLDLST---NQCVETI 273 (950)
T ss_dssp TTTEEEEEETTCEEEEEETTT---TEEEEEE
T ss_pred CCcEEEEEECCCEEEEEECCC---CCeEeee
Confidence 677999999999999999998 7766653
No 289
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.88 E-value=5.3 Score=36.09 Aligned_cols=32 Identities=6% Similarity=0.089 Sum_probs=28.0
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 191 PVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 191 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+.++...++..++.+-+.|+++|+|++.+++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 56778888888899999999999999998874
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=69.80 E-value=35 Score=26.14 Aligned_cols=117 Identities=6% Similarity=-0.093 Sum_probs=62.5
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE 164 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~ 164 (223)
..+..++|. +.++.++.+-..++ .|..++..++......+..+- ..+ ...++.+. ++.++++-..
T Consensus 35 ~~~~~ld~d------~~~~~lyw~D~~~~--~I~r~~~~g~~~~~~~~~~~l-~~p--~glavd~~----~g~ly~~d~~ 99 (318)
T 3sov_A 35 EDAAAVDFV------FSHGLIYWSDVSEE--AIKRTEFNKTESVQNVVVSGL-LSP--DGLACDWL----GEKLYWTDSE 99 (318)
T ss_dssp EEEEEEEEE------GGGTEEEEEETTTT--EEEEEETTSSSCCCEEEEECC-SCC--CEEEEETT----TTEEEEEETT
T ss_pred CccEEEEEE------eCCCEEEEEECCCC--cEEEEEccCCCceEEEEcCCC-CCc--cEEEEEcC----CCeEEEEECC
Confidence 346688998 13455656655556 566667665421111111111 111 22245543 4667777777
Q ss_pred CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEe--CCCcEEEeeCC
Q psy3599 165 DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSD--YQGLIILWSRE 219 (223)
Q Consensus 165 dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s--~d~~i~iwd~~ 219 (223)
.+.|.+++... ......+...-.....+++.|.+..|..+. ..+.|...++.
T Consensus 100 ~~~I~~~~~dG---~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 100 TNRIEVSNLDG---SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp TTEEEEEETTS---CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred CCEEEEEECCC---CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 78899998775 322222222234568889988654444443 24566666553
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=67.83 E-value=39 Score=25.85 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=57.2
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sgs 163 (223)
..+..+.+. +++.+++.+..+. .++-.|- +....... .+.... +.. .+.+ ++.+++.+.
T Consensus 122 ~~~~~i~~~-------~~~~~~~~~~~g~--v~~S~Dg--G~tW~~~~-~~~~~~---~~~~~~~~-----~~~~~~~g~ 181 (327)
T 2xbg_A 122 GSPRLIKAL-------GNGSAEMITNVGA--IYRTKDS--GKNWQALV-QEAIGV---MRNLNRSP-----SGEYVAVSS 181 (327)
T ss_dssp SCEEEEEEE-------ETTEEEEEETTCC--EEEESST--TSSEEEEE-CSCCCC---EEEEEECT-----TSCEEEEET
T ss_pred CCeEEEEEE-------CCCCEEEEeCCcc--EEEEcCC--CCCCEEee-cCCCcc---eEEEEEcC-----CCcEEEEEC
Confidence 346777776 6677777766555 5555443 32222111 233333 333 6777 577777665
Q ss_pred CCCcEEEEEc--ccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEe
Q psy3599 164 EDSCVYFLDI--QSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILW 216 (223)
Q Consensus 164 ~dg~v~iwd~--~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 216 (223)
..+..+-+|- .+ -+.+. ......+..+.+.+++..++.+ .+|.+++.
T Consensus 182 ~G~~~~S~d~gG~t---W~~~~--~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s 230 (327)
T 2xbg_A 182 RGSFYSTWEPGQTA---WEPHN--RTTSRRLHNMGFTPDGRLWMIV-NGGKIAFS 230 (327)
T ss_dssp TSSEEEEECTTCSS---CEEEE--CCSSSCEEEEEECTTSCEEEEE-TTTEEEEE
T ss_pred CCcEEEEeCCCCCc---eeECC--CCCCCccceeEECCCCCEEEEe-CCceEEEe
Confidence 4433333442 11 22221 2234568888888888766544 46766665
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=67.57 E-value=40 Score=29.16 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=50.7
Q ss_pred CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCC-CcEEEEEcccCcccc
Q psy3599 102 DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSED-SCVYFLDIQSKEHKN 180 (223)
Q Consensus 102 ~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~d-g~v~iwd~~~~~~~~ 180 (223)
.+.++++-.... .|.+.++..... ...+. .....+ -..++.|. .+.++++-... +.|...++.. ..
T Consensus 464 ~g~LY~tD~~~~--~I~v~d~dg~~~-~~l~~-~~~~~P--~giavDp~----~g~ly~td~~~~~~I~~~~~dG---~~ 530 (699)
T 1n7d_A 464 HSNIYWTDSVLG--TVSVADTKGVKR-KTLFR-EQGSKP--RAIVVDPV----HGFMYWTDWGTPAKIKKGGLNG---VD 530 (699)
T ss_dssp SSBCEECCTTTS--CEEEEBSSSCCE-EEECC-CSSCCC--CCEECCSS----SSCCEECCCSSSCCEEBCCSSS---CC
T ss_pred CCcEEEEeccCC--eEEEEecCCCce-EEEEe-CCCCCc--ceEEEccC----CCcEEEcccCCCCeEEEEeCCC---CC
Confidence 445555434444 466667765432 22211 111111 22246663 34444443322 6777776654 21
Q ss_pred cceee-cccccCEEEEEEecCC-CEEEEEeCCCcEEEeeCC
Q psy3599 181 AVNKL-QGHACPVLGVSFNYDE-SLLATSDYQGLIILWSRE 219 (223)
Q Consensus 181 ~~~~~-~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~ 219 (223)
...+ ...-.....|+++|++ .++++-+..+.|..+|+.
T Consensus 531 -~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 531 -IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp -CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred -eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 1111 1111234678999874 444555566778888874
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=66.15 E-value=56 Score=27.09 Aligned_cols=116 Identities=12% Similarity=0.155 Sum_probs=60.4
Q ss_pred CeeEEEEeecccccCC-CC-eEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEee-------ecCcccCCC
Q psy3599 86 PITCLSWRSWISREAR-DP-TLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTF-------CPIMSFREG 156 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~-~~-~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~-------s~~~~~~~~ 156 (223)
....|+|+ | +. .++++...+. .+++.|++.+. +......+......+...+| ++ ++
T Consensus 140 ~p~~la~d-------p~~~~~Lyv~~~~~~--~i~~ID~~~~~-v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-----~G 204 (496)
T 3kya_A 140 DNGRLAFD-------PLNKDHLYICYDGHK--AIQLIDLKNRM-LSSPLNINTIPTNRIRSIAFNKKIEGYAD-----EA 204 (496)
T ss_dssp SEEEEEEE-------TTEEEEEEEEEETEE--EEEEEETTTTE-EEEEECCTTSSCSBEEEEEECCCBTTTBC-----TT
T ss_pred CCCEEEEc-------cCCCCEEEEEECCCC--eEEEEECCCCE-EEEEEccCccccCCCcEEEEeecccccCC-----CC
Confidence 45688898 6 34 4444443434 67777888764 33332211111111133367 77 67
Q ss_pred cEEEEecCCC-------cEEEEEcccCcccccc-----eeecccccCEEEEEEecC-CCEEEEEeCCCcEEEeeCC
Q psy3599 157 ACVVTGSEDS-------CVYFLDIQSKEHKNAV-----NKLQGHACPVLGVSFNYD-ESLLATSDYQGLIILWSRE 219 (223)
Q Consensus 157 ~~l~sgs~dg-------~v~iwd~~~~~~~~~~-----~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~ 219 (223)
..|+.....+ .|.+.+.... +... ..+... .....++.+|+ +.++++--.++.|..+|+.
T Consensus 205 ~~lyvad~~~~~~~~~~~V~~i~r~~~--G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 205 EYMIVAIDYDGKGDESPSVYIIKRNAD--GTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CEEEEEECCCTTGGGEEEEEEEECCTT--SCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CEEEEEeCCCCCcccCceEEEEecCCC--CceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 7455444433 2666653220 1221 122111 12356788994 6666666678889999876
No 294
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=65.76 E-value=86 Score=29.10 Aligned_cols=60 Identities=13% Similarity=0.150 Sum_probs=40.0
Q ss_pred cEEEEecCCCcEEEEEcccCccccc--ceeecccccCEEEEEEecC------CCEEEEEeC-CCcEEEeeCCCC
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEHKNA--VNKLQGHACPVLGVSFNYD------ESLLATSDY-QGLIILWSREKH 221 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~~~~--~~~~~~h~~~v~~v~~~~~------~~~l~s~s~-d~~i~iwd~~~~ 221 (223)
..++.++ ++.+.++++.. +++ +.... -...|.|+++.|. ..+++.|.. |++++|+++...
T Consensus 524 ~~vvva~-g~~l~~fel~~---~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHP---QELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEET---TEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEE-CCEEEEEEeeC---CceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 3454444 56777787765 322 22222 2457999998763 368999986 999999998653
No 295
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=65.25 E-value=46 Score=25.78 Aligned_cols=115 Identities=12% Similarity=0.036 Sum_probs=62.2
Q ss_pred CeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCC
Q psy3599 86 PITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSED 165 (223)
Q Consensus 86 ~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~d 165 (223)
....+++. +.++.++++-.... .|.+.+.+.... .... ......+ -..++.|. ++.++++-...
T Consensus 117 ~p~glavd------~~~g~ly~~d~~~~--~I~~~~~dG~~~-~~l~-~~~l~~P--~~iavdp~----~g~ly~td~~~ 180 (349)
T 3v64_C 117 SPGGLAVD------WVHDKLYWTDSGTS--RIEVANLDGAHR-KVLL-WQSLEKP--RAIALHPM----EGTIYWTDWGN 180 (349)
T ss_dssp CCCEEEEE------TTTTEEEEEETTTT--EEEEEETTSCSC-EEEE-CTTCSCE--EEEEEETT----TTEEEEEECSS
T ss_pred CccEEEEe------cCCCeEEEEcCCCC--eEEEEcCCCCce-EEEE-eCCCCCc--ceEEEecC----cCeEEEeccCC
Confidence 34567776 13455556655555 566667664421 1111 1222222 33367774 45566665555
Q ss_pred -CcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEE-eCCCcEEEeeCC
Q psy3599 166 -SCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATS-DYQGLIILWSRE 219 (223)
Q Consensus 166 -g~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~ 219 (223)
+.|...++.. ......+...-.....++++|++..|..+ +..+.|..+|+.
T Consensus 181 ~~~I~r~~~dG---~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 181 TPRIEASSMDG---SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SCEEEEEETTS---CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEeCCC---CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 7788887765 22211112122346889999865555444 456778888765
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=62.78 E-value=40 Score=29.15 Aligned_cols=69 Identities=12% Similarity=0.077 Sum_probs=37.4
Q ss_pred eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 146 TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 146 ~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
+++|. .+.++++-+..+.|..+++... ....+......-.....|++..+ .++++....+.|..+|..+
T Consensus 546 avd~~----~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 546 TLDLL----SGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp EECTT----TCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTT
T ss_pred EEecc----CCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccC
Confidence 57773 4666677667788999988651 01112111111112233444433 4555555667888887654
No 297
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=62.28 E-value=46 Score=24.76 Aligned_cols=62 Identities=11% Similarity=0.075 Sum_probs=35.6
Q ss_pred CCcEEEEecCC-----CcEEEEEcccCccccc--ceeecccccCEEEEEEecCCCEEEEEeCCC-----cEEEeeCCCC
Q psy3599 155 EGACVVTGSED-----SCVYFLDIQSKEHKNA--VNKLQGHACPVLGVSFNYDESLLATSDYQG-----LIILWSREKH 221 (223)
Q Consensus 155 ~~~~l~sgs~d-----g~v~iwd~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~ 221 (223)
++.+++.|+.+ ..+.+||..+ .+- +..+.........+. -++.+++.|+.++ .+.+||+.+.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTT---NAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTT---TEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCC---CCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 57788888764 3688899876 322 222221111112222 2677788887553 4888888754
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=61.83 E-value=55 Score=25.49 Aligned_cols=113 Identities=12% Similarity=0.034 Sum_probs=55.4
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
......++|. +++.++++-.. + .|.+++. .+......+...........-.+++|.... ++.++++-+
T Consensus 28 l~~P~~ia~~-------pdG~l~V~e~~-g--~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~-~g~lyv~~~ 95 (354)
T 3a9g_A 28 LEVPWSIAPL-------GGGRYLVTERP-G--RLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPK-KSWVYLYAS 95 (354)
T ss_dssp CSCEEEEEEE-------ETTEEEEEETT-T--EEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTT-SCEEEEEEE
T ss_pred CCCCeEEEEc-------CCCeEEEEeCC-C--EEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCc-CCEEEEEEe
Confidence 4557899999 89997777655 4 4555564 343111111000111111144478882110 245555443
Q ss_pred C---C----CcEEEEEcccCc----ccc-cceeecc-cccCEEEEEEecCCCEEEEEe
Q psy3599 164 E---D----SCVYFLDIQSKE----HKN-AVNKLQG-HACPVLGVSFNYDESLLATSD 208 (223)
Q Consensus 164 ~---d----g~v~iwd~~~~~----~~~-~~~~~~~-h~~~v~~v~~~~~~~~l~s~s 208 (223)
. + ..|..|+..... ..+ .+..+.. .......+.|.|+|.+.++.+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 2 2 456667655410 011 1122221 111246789999998777754
No 299
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=61.41 E-value=58 Score=25.62 Aligned_cols=116 Identities=8% Similarity=-0.033 Sum_probs=62.3
Q ss_pred CCeeEEEEeecccccCC-CCeEEEEEeCC-CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEe
Q psy3599 85 CPITCLSWRSWISREAR-DPTLLVNIAAN-AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTG 162 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~-~~~~l~~~~~~-~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sg 162 (223)
.....+++. + ++.++++-... . .|...+...... ..... ..-..+ ...+++|. ++.++++=
T Consensus 202 ~~P~giavd-------p~~g~ly~td~~~~~--~I~r~~~dG~~~-~~~~~-~~~~~P--nGlavd~~----~~~lY~aD 264 (386)
T 3v65_B 202 EKPRAIALH-------PMEGTIYWTDWGNTP--RIEASSMDGSGR-RIIAD-THLFWP--NGLTIDYA----GRRMYWVD 264 (386)
T ss_dssp SCEEEEEEE-------TTTTEEEEEECSSSC--EEEEEETTSCSC-EEEEC-SSCSCE--EEEEEEGG----GTEEEEEE
T ss_pred CCCcEEEEE-------cCCCeEEEeccCCCC--EEEEEeCCCCCc-EEEEE-CCCCCe--eeEEEeCC----CCEEEEEE
Confidence 456788888 5 44555554433 4 455556654321 11111 111222 33468874 46666666
Q ss_pred cCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCCC
Q psy3599 163 SEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREKH 221 (223)
Q Consensus 163 s~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~ 221 (223)
+..+.|..+|+.. ......+...-.....+++ ..+.++.+-...+.|..+|..++
T Consensus 265 ~~~~~I~~~d~dG---~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 265 AKHHVIERANLDG---SHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp TTTTEEEEECTTS---CSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCEEEEEeCCC---CeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 6678899988765 2222222222234566777 34556666666778888774443
No 300
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=59.83 E-value=82 Score=26.90 Aligned_cols=77 Identities=12% Similarity=0.020 Sum_probs=46.1
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEe-CCCeEEEEEecCCCceE-----E---eeeeeccccCcceeEEEeeecCcccCC
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIA-ANAVCILKVLDKEGAVQ-----L---KRKFNVNHKSSKYQVRSTFCPIMSFRE 155 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~d~~~~~~-----~---~~~~~~~h~~~~~~i~~~~s~~~~~~~ 155 (223)
.....+..+ |||.+++.++ .+. .+.++|...-.. + .......-.-...++...|.+ +
T Consensus 323 ksPHGv~vs-------PDGkyi~v~GKLsp--tvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-----~ 388 (638)
T 3sbq_A 323 KNPHGCNTS-------SDGKYFIAAGKLSP--TCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-----R 388 (638)
T ss_dssp SSCCCEEEC-------TTSCEEEEECTTSS--BEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-----S
T ss_pred CCCcceeeC-------CCCCEEEEcCCCCC--eEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-----C
Confidence 344456666 9999998877 455 567777653111 0 000000001111237778988 6
Q ss_pred CcEEEEecCCCcEEEEEccc
Q psy3599 156 GACVVTGSEDSCVYFLDIQS 175 (223)
Q Consensus 156 ~~~l~sgs~dg~v~iwd~~~ 175 (223)
|+-..|--.|..|..|++..
T Consensus 389 G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 389 GNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SEEEEEETTTTEEEEEEHHH
T ss_pred CceEeeeeecceEEEEeccH
Confidence 86666777899999999986
No 301
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=59.42 E-value=51 Score=30.42 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=23.8
Q ss_pred CCcEEEEecCCCcEEEEEcccCcccccceee
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHKNAVNKL 185 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~ 185 (223)
+..++++-+.|+.+++|++.+ +.++.+.
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t---~~~v~t~ 275 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLST---NQCVETI 275 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTT---TEEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCC---CCeEEee
Confidence 578999999999999999998 7766553
No 302
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.04 E-value=14 Score=32.33 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=23.6
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 192 VLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 192 v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
|.++.+ +..++++-+.|+++|+|++++++
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 555443 57899999999999999999875
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=56.84 E-value=70 Score=25.14 Aligned_cols=30 Identities=10% Similarity=0.153 Sum_probs=23.2
Q ss_pred cCEEEEEEecCCCEEEEEe-CCCcEEEeeCC
Q psy3599 190 CPVLGVSFNYDESLLATSD-YQGLIILWSRE 219 (223)
Q Consensus 190 ~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~ 219 (223)
...+.++|+|++..|..+. ..+.|..|++.
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 3468899999998766554 57889999875
No 304
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=55.42 E-value=65 Score=24.38 Aligned_cols=114 Identities=12% Similarity=0.005 Sum_probs=62.6
Q ss_pred CCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
.....+++. . ++.++++-..+. .|.+.+..... ...... .....+ -..++.|. ++.++++..
T Consensus 77 ~~p~glavd-------~~~~~ly~~d~~~~--~I~~~~~~g~~-~~~~~~-~~~~~P--~~iavdp~----~g~ly~~d~ 139 (316)
T 1ijq_A 77 QAPDGLAVD-------WIHSNIYWTDSVLG--TVSVADTKGVK-RKTLFR-ENGSKP--RAIVVDPV----HGFMYWTDW 139 (316)
T ss_dssp SCCCEEEEE-------TTTTEEEEEETTTT--EEEEEETTSSS-EEEEEE-CTTCCE--EEEEEETT----TTEEEEEEC
T ss_pred CCcCEEEEe-------ecCCeEEEEECCCC--EEEEEeCCCCc-eEEEEE-CCCCCc--ceEEeCCC----CCEEEEEcc
Confidence 345778887 4 455556655555 66777776442 222211 111222 33367773 355555544
Q ss_pred CC-CcEEEEEcccCcccccceee-cccccCEEEEEEecCCCEEEEE-eCCCcEEEeeCC
Q psy3599 164 ED-SCVYFLDIQSKEHKNAVNKL-QGHACPVLGVSFNYDESLLATS-DYQGLIILWSRE 219 (223)
Q Consensus 164 ~d-g~v~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~ 219 (223)
.. +.|...+... . ....+ ...-.....+++++++..|..+ +..+.|..+|+.
T Consensus 140 ~~~~~I~~~~~dG---~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 140 GTPAKIKKGGLNG---V-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp SSSCEEEEEETTS---C-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCeEEEEcCCC---C-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 33 6788777654 2 22222 1122356889999876655444 456788888875
No 305
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.13 E-value=7.3 Score=35.94 Aligned_cols=32 Identities=6% Similarity=0.089 Sum_probs=26.2
Q ss_pred CEEEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 191 PVLGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 191 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
.+.+++..++..++++-+.|+++|+|++.+++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 34555666788899999999999999998874
No 306
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=55.06 E-value=1.3e+02 Score=27.85 Aligned_cols=114 Identities=12% Similarity=0.129 Sum_probs=64.3
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
.+++++++-- .|.+|+.. . . .+++|++.....+... ..+-.....+. ... .+++++.|.
T Consensus 885 ~g~v~al~~~--------~g~Lla~i-g-~--~l~vy~l~~~~~L~~~--~~~~~~i~~~~--l~~-----~~~~I~vgD 943 (1158)
T 3ei3_A 885 KGAVYSMVEF--------NGKLLASI-N-S--TVRLYEWTTEKELRTE--CNHYNNIMALY--LKT-----KGDFILVGD 943 (1158)
T ss_dssp SSCEEEEEEE--------TTEEEEEE-T-T--EEEEEEECTTSCEEEE--EEECCCSCEEE--EEE-----ETTEEEEEE
T ss_pred CCcCEEEeee--------CCEEEEEc-C-C--EEEEEECCCCceEEEE--eeccccEEEEE--Eec-----cCCEEEEEE
Confidence 5778888754 45555443 3 3 5788887654333311 11111110012 111 378889998
Q ss_pred CCCcEEEEEcccCcccccceee-cccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKL-QGHACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
.-.+|.+...+... .++...- .-+...++++.+-.+ ..++.+..+|.+.+.....
T Consensus 944 ~~~Sv~~~~y~~~~-~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 944 LMRSVLLLAYKPME-GNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp SSBCEEEEEEETTT-TEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred hhheEEEEEEEcCC-CeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 88888777665411 2222211 224567888888655 4677788899988876543
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=54.83 E-value=63 Score=23.99 Aligned_cols=62 Identities=11% Similarity=0.110 Sum_probs=34.8
Q ss_pred CCcEEEEecCC-------CcEEEEEcccCcccc--cceeecccccCEEEEEEecCCCEEEEEeCC-----CcEEEeeCCC
Q psy3599 155 EGACVVTGSED-------SCVYFLDIQSKEHKN--AVNKLQGHACPVLGVSFNYDESLLATSDYQ-----GLIILWSREK 220 (223)
Q Consensus 155 ~~~~l~sgs~d-------g~v~iwd~~~~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~ 220 (223)
++.+++.|+.+ ..+.+||..+ .+ .+..+........++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATT---NEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTT---TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCC---CcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCC
Confidence 56777777653 3478888876 32 22222211111222222 56777888754 4688888875
Q ss_pred C
Q psy3599 221 H 221 (223)
Q Consensus 221 ~ 221 (223)
.
T Consensus 230 ~ 230 (302)
T 2xn4_A 230 N 230 (302)
T ss_dssp T
T ss_pred C
Confidence 4
No 308
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=54.58 E-value=77 Score=24.98 Aligned_cols=145 Identities=10% Similarity=0.115 Sum_probs=74.4
Q ss_pred CCcEEEEEECC-CCceeeeeee--e-ecCCCCeeEEEE--eecccccCCCCe-EEEEEeCCC-eEEEEEecCCCc----e
Q psy3599 59 TGVIVSILCDD-LGRLSKGKRL--V-LSQDCPITCLSW--RSWISREARDPT-LLVNIAANA-VCILKVLDKEGA----V 126 (223)
Q Consensus 59 ~~~i~~~~~~~-~~~~~~~~~~--~-~~~~~~i~~l~~--~~~~~~~~~~~~-~l~~~~~~~-~~~v~i~d~~~~----~ 126 (223)
.+.|..+..+| .+.+...... . ......++.+++ + +..+. +++....++ +..+++.+...+ +
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~------~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~ 171 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHS------QKTGKYYAMVTGKEGEFEQYELKADKNGYISGK 171 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEEC------TTTCCEEEEEECSSSEEEEEEEEECTTSCEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEec------CCCCcEEEEEECCCCeEEEEEEEeCCCCcccce
Confidence 56788788887 3343332111 1 121266777888 4 23454 444444445 444444443322 2
Q ss_pred EEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCc--ccccceeec-c-cccCEEEEEE--ecC
Q psy3599 127 QLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKE--HKNAVNKLQ-G-HACPVLGVSF--NYD 200 (223)
Q Consensus 127 ~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~--~~~~~~~~~-~-h~~~v~~v~~--~~~ 200 (223)
.+. .|..+. .+ -.|...+ ....|+.+-++.-|..++.+... .+..+..+. + -...+..++. .++
T Consensus 172 lVR-~f~lgs--q~--EgcvvDd-----~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~ 241 (355)
T 3amr_A 172 KVR-AFKMNS--QT--EGMAADD-----EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAAD 241 (355)
T ss_dssp EEE-EEECSS--CE--EEEEEET-----TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGG
T ss_pred EEE-EecCCC--Cc--ceEEEcC-----CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCC
Confidence 333 333232 21 3345666 57788888888555555544210 023443332 1 2225677776 455
Q ss_pred CC-EEEEEe-CCCcEEEeeCC
Q psy3599 201 ES-LLATSD-YQGLIILWSRE 219 (223)
Q Consensus 201 ~~-~l~s~s-~d~~i~iwd~~ 219 (223)
+. +|+.++ .+++..+||.+
T Consensus 242 g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 242 GKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp GCEEEEEEEGGGTEEEEEESS
T ss_pred CCEEEEEEcCCCCEEEEEECC
Confidence 44 455555 57789999986
No 309
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=54.39 E-value=69 Score=24.37 Aligned_cols=106 Identities=9% Similarity=0.141 Sum_probs=58.1
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE-eeecCcccCCCcEEEEe
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS-TFCPIMSFREGACVVTG 162 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~-~~s~~~~~~~~~~l~sg 162 (223)
...+..+.+. +++.+++.+..+. .++..|.. +...... ....... +.. .+.+ ++.+++ .
T Consensus 162 ~~~~~~~~~~-------~~~~~~~~g~~G~--~~~S~d~g-G~tW~~~-~~~~~~~---~~~~~~~~-----~g~~~~-~ 221 (327)
T 2xbg_A 162 IGVMRNLNRS-------PSGEYVAVSSRGS--FYSTWEPG-QTAWEPH-NRTTSRR---LHNMGFTP-----DGRLWM-I 221 (327)
T ss_dssp CCCEEEEEEC-------TTSCEEEEETTSS--EEEEECTT-CSSCEEE-ECCSSSC---EEEEEECT-----TSCEEE-E
T ss_pred CcceEEEEEc-------CCCcEEEEECCCc--EEEEeCCC-CCceeEC-CCCCCCc---cceeEECC-----CCCEEE-E
Confidence 3467888888 7888888777766 56665531 1111111 1122223 333 5666 566554 4
Q ss_pred cCCCcEEEEEcccCcccccceeec----ccccCEEEEEEecCCCEEEEEeCCCcE
Q psy3599 163 SEDSCVYFLDIQSKEHKNAVNKLQ----GHACPVLGVSFNYDESLLATSDYQGLI 213 (223)
Q Consensus 163 s~dg~v~iwd~~~~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~s~d~~i 213 (223)
+.+|.+++.+... ++.-..+. .+...+.++.+.+++.+++.+. ++.+
T Consensus 222 ~~~G~~~~s~~D~---G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 222 VNGGKIAFSDPDN---SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp ETTTEEEEEETTE---EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred eCCceEEEecCCC---CCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 5678777764222 22111111 1223588899988877777665 6655
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=53.87 E-value=66 Score=23.93 Aligned_cols=106 Identities=7% Similarity=0.049 Sum_probs=52.3
Q ss_pred CCeEEEEEeCC--CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCC------CcEEEEEc
Q psy3599 102 DPTLLVNIAAN--AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSED------SCVYFLDI 173 (223)
Q Consensus 102 ~~~~l~~~~~~--~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~d------g~v~iwd~ 173 (223)
++.+++.|+.+ ....+.+||+.+..-... ..-..... ...+ ... ++.+++.|+.+ ..+.+||.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~-~~~~-~~~-----~~~iyv~GG~~~~~~~~~~~~~~d~ 125 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK--LGPPTPRD-SLAA-CAA-----EGKIYTSGGSEVGNSALYLFECYDT 125 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEE--ECCSSCCB-SCEE-EEE-----TTEEEEECCBBTTBSCCCCEEEEET
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC--CCCCcccc-ceeE-EEE-----CCEEEEECCCCCCCcEeeeEEEEeC
Confidence 56677766633 122567788877643221 10111110 0111 111 57777888765 45888898
Q ss_pred ccCccccc--ceeecccccCEEEEEEecCCCEEEEEeC---------CCcEEEeeCCCC
Q psy3599 174 QSKEHKNA--VNKLQGHACPVLGVSFNYDESLLATSDY---------QGLIILWSREKH 221 (223)
Q Consensus 174 ~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~---------d~~i~iwd~~~~ 221 (223)
.+ .+- +..+......-.++. -++.+++.|+. -..+.+||+.+.
T Consensus 126 ~~---~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 126 RT---ESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TT---TEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CC---CceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 77 332 222221111112222 26667777763 345788887654
No 311
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=49.82 E-value=93 Score=24.51 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=54.5
Q ss_pred CCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEE--eeecCcccCCCc---EEEEec-C--CCcEEEEE
Q psy3599 101 RDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRS--TFCPIMSFREGA---CVVTGS-E--DSCVYFLD 172 (223)
Q Consensus 101 ~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~--~~s~~~~~~~~~---~l~sgs-~--dg~v~iwd 172 (223)
+...+++.....+ -+.+||+ .++.+... ..+.-+. +.. .|.- .+. ++++.. . ++.|.+|+
T Consensus 38 p~~s~ii~t~k~~--gL~Vydl-~G~~l~~~-~~g~~nn---VD~r~~~~l-----~g~~~dla~as~R~~~~n~l~vf~ 105 (355)
T 3amr_A 38 PQNSKLITTNKKS--GLVVYSL-DGKMLHSY-NTGKLNN---VDIRYDFPL-----NGKKVDIAAASNRSEGKNTIEIYA 105 (355)
T ss_dssp GGGCEEEEEETTT--EEEEEET-TSCEEEEE-CCSCEEE---EEEEEEEEE-----TTEEEEEEEEEECSTTCCEEEEEE
T ss_pred CCccEEEEEcCCC--CEEEEcC-CCcEEEEc-cCCCccc---EEEeccccc-----CCceEeEEEEeCCCCCCCeEEEEE
Confidence 4445555555555 5789999 56566542 2122222 322 2322 232 233333 3 57899997
Q ss_pred cccCcccccceeecc------cc-cCEEEEEE--ecC-CC-EEEEEeCCCcEEEeeCC
Q psy3599 173 IQSKEHKNAVNKLQG------HA-CPVLGVSF--NYD-ES-LLATSDYQGLIILWSRE 219 (223)
Q Consensus 173 ~~~~~~~~~~~~~~~------h~-~~v~~v~~--~~~-~~-~l~s~s~d~~i~iwd~~ 219 (223)
+.... ++ +..+.. .. ..+..+++ +|. +. +++....+|.+..|++.
T Consensus 106 iDp~~-~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~ 161 (355)
T 3amr_A 106 IDGKN-GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELK 161 (355)
T ss_dssp ECTTT-CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEE
T ss_pred ECCCC-Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEE
Confidence 74200 22 333311 11 34455666 664 43 56666778999998873
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=48.83 E-value=30 Score=25.58 Aligned_cols=60 Identities=15% Similarity=0.060 Sum_probs=37.0
Q ss_pred eeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCE--------EEEEEecCCCEEEEEeCCCcEEEee
Q psy3599 146 TFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPV--------LGVSFNYDESLLATSDYQGLIILWS 217 (223)
Q Consensus 146 ~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v--------~~v~~~~~~~~l~s~s~d~~i~iwd 217 (223)
+|+| ++.+.+. .+|.++-.+..+ .....-+. -...| .++.|.|+|.+.++ .||.|.-++
T Consensus 47 af~P-----~G~LYaV--~~G~Ly~~~~~t---~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 47 FLSP-----GGELYGV--LNDKIYKGTPPT---HDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp EECT-----TSCEEEE--ETTEEEEESCCC---STTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred EECC-----CccEEEE--eCCeEEEECCCC---CCcccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEEEeC
Confidence 7898 6886666 667665555433 22211111 12223 67899999998888 468887776
Q ss_pred C
Q psy3599 218 R 218 (223)
Q Consensus 218 ~ 218 (223)
.
T Consensus 114 p 114 (236)
T 1tl2_A 114 P 114 (236)
T ss_dssp C
T ss_pred C
Confidence 5
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=48.76 E-value=81 Score=23.52 Aligned_cols=62 Identities=8% Similarity=0.072 Sum_probs=35.7
Q ss_pred CCcEEEEecCC-----CcEEEEEcccCcccc--cceeecccccCEEEEEEecCCCEEEEEeCC-----CcEEEeeCCCC
Q psy3599 155 EGACVVTGSED-----SCVYFLDIQSKEHKN--AVNKLQGHACPVLGVSFNYDESLLATSDYQ-----GLIILWSREKH 221 (223)
Q Consensus 155 ~~~~l~sgs~d-----g~v~iwd~~~~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 221 (223)
++.+++.|+.+ ..+.+||..+ .+ .+..+......-.++.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPER---NEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTT---TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCC---CeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 47777777764 3588888876 32 22222211122222333 66777788754 55888888654
No 314
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=48.65 E-value=1.4e+02 Score=26.30 Aligned_cols=117 Identities=8% Similarity=-0.070 Sum_probs=60.9
Q ss_pred CCCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCce---EEeeeeeccccCcceeEEEeeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAV---QLKRKFNVNHKSSKYQVRSTFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~---~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l 159 (223)
...+..|+|. . ++.++++-...+ .|..+++.... .....+. .....+ ...++.+. .++++
T Consensus 423 ~~~~~gl~~d-------~~~~~lY~sD~~~~--~I~~~~l~g~~~~~~~~~vi~-~~l~~P--~GLAvD~~----~~~LY 486 (791)
T 3m0c_C 423 LRNVVALDTE-------VASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVIS-RDIQAP--DGLAVDWI----HSNIY 486 (791)
T ss_dssp CSSEEEEEEE-------TTTTEEEEEETTTT--EEEEEEC--------CEEEEC-SSCSCC--CEEEEETT----TTEEE
T ss_pred CCceEEEeec-------ccCCeeEEeeccce--eEEEEeccCCCCCcceeEEEe-cCCCCc--ceeeeeec----CCcEE
Confidence 4567788998 5 455555555555 55555655321 1111111 111222 22345553 35777
Q ss_pred EEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEe-CC-CcEEEeeCC
Q psy3599 160 VTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSD-YQ-GLIILWSRE 219 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d-~~i~iwd~~ 219 (223)
++-...+.|.+.++.. ......+...-.....|++.|....|..+. .. +.|...++.
T Consensus 487 ~tD~~~~~I~v~~ldG---~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 487 WTDSVLGTVSVADTKG---VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp EEETTTTEEEEEETTS---SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEecCCCeEEEEeCCC---CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 7777788999998876 332222222233478899998744444333 22 556666553
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=48.13 E-value=84 Score=23.50 Aligned_cols=109 Identities=7% Similarity=-0.092 Sum_probs=0.0
Q ss_pred CCeEEEEEe------CCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC------CCcEE
Q psy3599 102 DPTLLVNIA------ANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE------DSCVY 169 (223)
Q Consensus 102 ~~~~l~~~~------~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~------dg~v~ 169 (223)
++.+++.|+ ......+.+||+.+..-....-........ ..+.+ ++.+++.|+. -..+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~--~~~~~-------~~~iyv~GG~~~~~~~~~~~~ 168 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH--TVLSH-------MDLVYVIGGKGSDRKCLNKMC 168 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC--EEEEE-------TTEEEEECCBCTTSCBCCCEE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce--eEEEE-------CCEEEEEeCCCCCCcccceEE
Q ss_pred EEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCc-----EEEeeCCCCC
Q psy3599 170 FLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGL-----IILWSREKHE 222 (223)
Q Consensus 170 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~-----i~iwd~~~~~ 222 (223)
+||..+ .+-...-..........+..-++.+++.|+.++. +.+||+.+.+
T Consensus 169 ~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 169 VYDPKK---FEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEETTT---TEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEeCCC---CeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
No 316
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=46.42 E-value=1.4e+02 Score=25.66 Aligned_cols=65 Identities=9% Similarity=0.199 Sum_probs=38.3
Q ss_pred CCcEEEEecCCC--cEEEEEcccCccccc--cee---ecccccCEEEEEEecC-CCEEEEEeC--C-----CcEEEeeCC
Q psy3599 155 EGACVVTGSEDS--CVYFLDIQSKEHKNA--VNK---LQGHACPVLGVSFNYD-ESLLATSDY--Q-----GLIILWSRE 219 (223)
Q Consensus 155 ~~~~l~sgs~dg--~v~iwd~~~~~~~~~--~~~---~~~h~~~v~~v~~~~~-~~~l~s~s~--d-----~~i~iwd~~ 219 (223)
++.+++.|+.++ .+.+||..+ ..- +.. .......-.++.+..+ +.+++.|+. + +.+.+||+.
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t---~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTE---EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTT---TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred CCEEEEECCCCCCCCEEEEECCC---CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 577888888755 688999877 321 111 1111112233555555 667778875 2 458888887
Q ss_pred CCC
Q psy3599 220 KHE 222 (223)
Q Consensus 220 ~~~ 222 (223)
+.+
T Consensus 577 ~~~ 579 (695)
T 2zwa_A 577 AEN 579 (695)
T ss_dssp TTC
T ss_pred CCc
Confidence 653
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=45.86 E-value=28 Score=27.22 Aligned_cols=63 Identities=8% Similarity=0.111 Sum_probs=38.2
Q ss_pred CcEEEEecCCCcEEEEEcccCcccccceeecccc-cCEEEEEEe--c-CCCEEEEE-eCCCcEEEeeCCCC
Q psy3599 156 GACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHA-CPVLGVSFN--Y-DESLLATS-DYQGLIILWSREKH 221 (223)
Q Consensus 156 ~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~-~~v~~v~~~--~-~~~~l~s~-s~d~~i~iwd~~~~ 221 (223)
+.+++.++.||.|+-.|..+ ++.+-.++... .++....-. + ++..++.. +.||.+..+|..+|
T Consensus 10 ~~~V~v~t~dG~l~Ald~~t---G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRN---GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEEETTSCEEEEETTT---TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CCEEEEEeCCCeEEEEECCC---CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 56788899999999999888 77776665431 122111100 1 22333333 57888888886654
No 318
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=45.31 E-value=99 Score=23.53 Aligned_cols=115 Identities=13% Similarity=0.043 Sum_probs=61.3
Q ss_pred CCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec-
Q psy3599 85 CPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS- 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs- 163 (223)
.....+++. +..+.++++-.... .|.+.+++... ..... ......+ ...++.|. .+.++.+-.
T Consensus 79 ~~p~glavd------~~~g~ly~~d~~~~--~I~~~~~dG~~-~~~l~-~~~~~~P--~giavdp~----~g~ly~td~~ 142 (318)
T 3sov_A 79 LSPDGLACD------WLGEKLYWTDSETN--RIEVSNLDGSL-RKVLF-WQELDQP--RAIALDPS----SGFMYWTDWG 142 (318)
T ss_dssp SCCCEEEEE------TTTTEEEEEETTTT--EEEEEETTSCS-CEEEE-CSSCSSE--EEEEEEGG----GTEEEEEECS
T ss_pred CCccEEEEE------cCCCeEEEEECCCC--EEEEEECCCCc-EEEEE-eCCCCCc--cEEEEeCC----CCEEEEEecC
Confidence 345567777 13556666655555 66777776432 11111 1222222 33367773 355555542
Q ss_pred CCCcEEEEEcccCcccccceee-cccccCEEEEEEecCCCEEEEE-eCCCcEEEeeCC
Q psy3599 164 EDSCVYFLDIQSKEHKNAVNKL-QGHACPVLGVSFNYDESLLATS-DYQGLIILWSRE 219 (223)
Q Consensus 164 ~dg~v~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~ 219 (223)
..+.|...+... .. ...+ ...-...+.+++++++..|..+ +..+.|..+|+.
T Consensus 143 ~~~~I~r~~~dG---~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 143 EVPKIERAGMDG---SS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp SSCEEEEEETTS---CS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEEcCC---CC-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 356787777654 22 2222 2112345889999865555444 456778888865
No 319
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=43.27 E-value=1.5e+02 Score=25.11 Aligned_cols=105 Identities=5% Similarity=-0.099 Sum_probs=53.8
Q ss_pred CCCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEe
Q psy3599 84 DCPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTG 162 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sg 162 (223)
......++|+ + ++.++++-..+. .|..++.+........+..+ ...+ -..++.+. .++++++-
T Consensus 39 ~~~~~~ld~~-------~~~~~ly~sD~~~~--~I~r~~~~g~~~~~~v~~~~-~~~P--~GlAvD~~----~~~ly~~d 102 (619)
T 3s94_A 39 LEDAAAVDFV-------FSHGLIYWSDVSEE--AIKRTEFNKTESVQNVVVSG-LLSP--DGLACDWL----GEKLYWTD 102 (619)
T ss_dssp CSCEEEEEEE-------TTTTEEEEEETTTT--EEEEEEC-----CEEEECSS-CSCE--EEEEEETT----TTEEEEEE
T ss_pred CCceEEEEEE-------eCCCEEEEEECCCC--eEEEEEccCCCceEEEEeCC-CCCc--CeEEEEec----CCEEEEEe
Confidence 4567889998 5 455555544445 55555665442112222111 1222 22356653 46677777
Q ss_pred cCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEE
Q psy3599 163 SEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATS 207 (223)
Q Consensus 163 s~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~ 207 (223)
...+.|.+.+... ......+...-.....+++.|.+..|..+
T Consensus 103 ~~~~~I~v~~~dG---~~~~~l~~~~l~~P~~Iavdp~~g~ly~t 144 (619)
T 3s94_A 103 SETNRIEVSNLDG---SLRKVLFWQELDQPRAIALDPSSGFMYWT 144 (619)
T ss_dssp TTTTEEEEEETTS---CSCEEEECSSCSCCCCEEEETTTTEEEEE
T ss_pred CCCCEEEEEECCC---CCEEEEEeCCCCCCceEEEecCCCeEEEe
Confidence 7788999998876 32212221222335678888864444333
No 320
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=41.40 E-value=1.3e+02 Score=23.74 Aligned_cols=117 Identities=8% Similarity=-0.076 Sum_probs=62.1
Q ss_pred CCCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCce---EEeeeeeccccCcceeEEEeeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAV---QLKRKFNVNHKSSKYQVRSTFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~---~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l 159 (223)
...+..++|+ + ++.++.+-..++ .|..+++.... ...... ......+ ...++.+. .+.++
T Consensus 111 ~~~~~~l~~d-------~~~~~lywsD~~~~--~I~~~~~~g~~~~~~~~~~~-~~~~~~p--~glavD~~----~~~lY 174 (400)
T 3p5b_L 111 LRNVVALDTE-------VASNRIYWSDLSQR--MICSTQLDRAHGVSSYDTVI-SRDIQAP--DGLAVDWI----HSNIY 174 (400)
T ss_dssp CSCEEEEEEE-------TTTTEEEEEETTTT--EEEEEEC------CCCEEEE-CSSCSCE--EEEEEETT----TTEEE
T ss_pred cCcceEEeee-------eccCceEEEecCCC--eEEEEEcccCCCCCcceEEE-eCCCCCc--ccEEEEec----CCceE
Confidence 5678899999 5 455555544555 56556665421 111111 1111221 22255553 46677
Q ss_pred EEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEe-C-CCcEEEeeCC
Q psy3599 160 VTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSD-Y-QGLIILWSRE 219 (223)
Q Consensus 160 ~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~-d~~i~iwd~~ 219 (223)
++-...+.|.+.++.. ......+...-.....+++.|.+..|..+. . .+.|...++.
T Consensus 175 ~~d~~~~~I~~~~~~g---~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 175 WTDSVLGTVSVADTKG---VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEETTTTEEEEECTTT---CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred EEECCCCeEEEEeCCC---CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 7777778898888776 332222322233468899998655444443 2 3566666654
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=40.97 E-value=1.1e+02 Score=22.62 Aligned_cols=62 Identities=10% Similarity=0.125 Sum_probs=35.6
Q ss_pred CCcEEEEecCC-----CcEEEEEcccCccccc--ceeecccccCEEEEEEecCCCEEEEEeCC-----CcEEEeeCCCC
Q psy3599 155 EGACVVTGSED-----SCVYFLDIQSKEHKNA--VNKLQGHACPVLGVSFNYDESLLATSDYQ-----GLIILWSREKH 221 (223)
Q Consensus 155 ~~~~l~sgs~d-----g~v~iwd~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 221 (223)
++.+++.|+.+ ..+.+||..+ .+- +..+........++.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~---~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHT---GHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTT---TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCC---CcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 57777877754 3588889876 322 2222211111222322 56777787754 46888988754
No 322
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=39.54 E-value=1.4e+02 Score=23.56 Aligned_cols=116 Identities=12% Similarity=0.009 Sum_probs=63.9
Q ss_pred CCeeEEEEeecccccCC-CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREAR-DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
.....+++. . .+.++++-.... .|.+.+++.... ...+. .....+ -..++.|. .+.++.+-.
T Consensus 159 ~~p~glavD-------~~~~~lY~~d~~~~--~I~~~~~~g~~~-~~l~~-~~~~~P--~~iavdp~----~g~ly~td~ 221 (400)
T 3p5b_L 159 QAPDGLAVD-------WIHSNIYWTDSVLG--TVSVADTKGVKR-KTLFR-ENGSKP--RAIVVDPV----HGFMYWTDW 221 (400)
T ss_dssp SCEEEEEEE-------TTTTEEEEEETTTT--EEEEECTTTCSE-EEEEE-CSSCCE--EEEEEETT----TTEEEEEEC
T ss_pred CCcccEEEE-------ecCCceEEEECCCC--eEEEEeCCCCce-EEEEe-CCCCCc--ceEEEecc----cCeEEEEeC
Confidence 345567776 4 566666655566 677778775432 22221 111222 33367773 355555542
Q ss_pred C-CCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEe-CCCcEEEeeCCC
Q psy3599 164 E-DSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSD-YQGLIILWSREK 220 (223)
Q Consensus 164 ~-dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~ 220 (223)
. .+.|...++.. ......+...-.....+++++++..|..+. ..+.|..+|+..
T Consensus 222 ~~~~~I~~~~~dG---~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 222 GTPAKIKKGGLNG---VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp SSSCCEEEEETTS---CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCEEEEEeCCC---CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 2 36788887765 222222222224568899998766555554 456788887653
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=37.87 E-value=1.2e+02 Score=22.48 Aligned_cols=62 Identities=10% Similarity=0.162 Sum_probs=35.7
Q ss_pred CCcEEEEecCC-----CcEEEEEcccCcccc--cceeecccccCEEEEEEecCCCEEEEEeCC-----CcEEEeeCCCC
Q psy3599 155 EGACVVTGSED-----SCVYFLDIQSKEHKN--AVNKLQGHACPVLGVSFNYDESLLATSDYQ-----GLIILWSREKH 221 (223)
Q Consensus 155 ~~~~l~sgs~d-----g~v~iwd~~~~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 221 (223)
++.+++.|+.+ ..+.+||+.+ .+ .+..+.........+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVET---ETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTT---TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCC---CcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 57777888764 4688999877 33 22222221112222222 56777887743 45788888754
No 324
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=37.69 E-value=1.3e+02 Score=22.53 Aligned_cols=107 Identities=8% Similarity=0.029 Sum_probs=0.0
Q ss_pred CCeEEEEEeCC-------CeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecC------CCcE
Q psy3599 102 DPTLLVNIAAN-------AVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSE------DSCV 168 (223)
Q Consensus 102 ~~~~l~~~~~~-------~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~------dg~v 168 (223)
++.+++.|+.+ . .+.+||+.+..-.. .........-.+.... ++.+++.|+. -..+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~--~~~~yd~~~~~W~~----~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~ 177 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLD--SVLCYDPVAAKWSE----VKNLPIKVYGHNVISH-----NGMIYCLGGKTDDKKCTNRV 177 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEE--EEEEEETTTTEEEE----ECCCSSCEESCEEEEE-----TTEEEEECCEESSSCBCCCE
T ss_pred CCEEEEEcCccCCCCcccc--eEEEEeCCCCCEeE----CCCCCCcccccEEEEE-----CCEEEEEcCCCCCCCccceE
Q ss_pred EEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCC-----CcEEEeeCCCCC
Q psy3599 169 YFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQ-----GLIILWSREKHE 222 (223)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~ 222 (223)
.+||..+ .+-...-.........-+..-++.+++.|+.+ ..+.+||+.+.+
T Consensus 178 ~~yd~~~---~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 178 FIYNPKK---GDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEETTT---TEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEcCCC---CEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=37.61 E-value=1.5e+02 Score=23.27 Aligned_cols=130 Identities=5% Similarity=-0.038 Sum_probs=66.3
Q ss_pred CcEEEEEECCCCce-eeeeeeeecCCCCeeEEEEeecccccCCCCeEEEEEeC---C-------------CeEEEEEecC
Q psy3599 60 GVIVSILCDDLGRL-SKGKRLVLSQDCPITCLSWRSWISREARDPTLLVNIAA---N-------------AVCILKVLDK 122 (223)
Q Consensus 60 ~~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~~---~-------------~~~~v~i~d~ 122 (223)
+.|..+.+++.+.. .....+....-...+++... ++|.+.++..- + .-+.++ ++.
T Consensus 139 s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~-------~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr-~d~ 210 (355)
T 3sre_A 139 STVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAV-------GPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY-YSP 210 (355)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEE-------ETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE-ECT
T ss_pred CeEEEEEEECCCCEEEEEeccccCCCCCCceEEEe-------CCCCEEecCCcEeCCcccccchhhccCCccEEEE-EEC
Confidence 44555566664332 22223333323467889998 88888877541 1 111222 343
Q ss_pred CCceEEeeeeeccccCcceeEEEeeecCcccCCCcE-EEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEec-C
Q psy3599 123 EGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGAC-VVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNY-D 200 (223)
Q Consensus 123 ~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~-l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~-~ 200 (223)
..-..+.. +- ... --.+|+| +++. +++-+..+.|+.|++...+.......+. .....-.++..+ +
T Consensus 211 ~~~~~~~~----~l-~~p--NGia~sp-----Dg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~ 277 (355)
T 3sre_A 211 NDVRVVAE----GF-DFA--NGINISP-----DGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVT 277 (355)
T ss_dssp TCCEEEEE----EE-SSE--EEEEECT-----TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTT
T ss_pred CeEEEeec----CC-ccc--CcceECC-----CCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCC
Confidence 21111111 11 111 2237999 6754 4555567889999986411011112231 234456788888 5
Q ss_pred CCEEEEEeCC
Q psy3599 201 ESLLATSDYQ 210 (223)
Q Consensus 201 ~~~l~s~s~d 210 (223)
|++.+++..+
T Consensus 278 G~lwva~~~~ 287 (355)
T 3sre_A 278 GDLWVGCHPN 287 (355)
T ss_dssp CCEEEEEESC
T ss_pred CcEEEEecCC
Confidence 8887766533
No 326
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=37.53 E-value=2.2e+02 Score=25.17 Aligned_cols=115 Identities=12% Similarity=-0.002 Sum_probs=61.7
Q ss_pred CCeeEEEEeecccccCCCC-eEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEec
Q psy3599 85 CPITCLSWRSWISREARDP-TLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGS 163 (223)
Q Consensus 85 ~~i~~l~~~~~~~~~~~~~-~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs 163 (223)
.....|++. ..+ .++++-...+ .|.+.++..... ..... .....+ -..++.|. .+.++++-.
T Consensus 471 ~~P~GLAvD-------~~~~~LY~tD~~~~--~I~v~~ldG~~~-~~l~~-~~l~~P--~gIaVDp~----~g~LYwtD~ 533 (791)
T 3m0c_C 471 QAPDGLAVD-------WIHSNIYWTDSVLG--TVSVADTKGVKR-KTLFR-ENGSKP--RAIVVDPV----HGFMYWTDW 533 (791)
T ss_dssp SCCCEEEEE-------TTTTEEEEEETTTT--EEEEEETTSSSE-EEEEE-CTTCCE--EEEEEETT----TTEEEEEEC
T ss_pred CCcceeeee-------ecCCcEEEEecCCC--eEEEEeCCCCeE-EEEEe-CCCCCc--ceEEEecC----CCCEEEecC
Confidence 345667777 444 5555555566 677777765432 22211 222222 33367773 355555543
Q ss_pred CC-CcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEe-CCCcEEEeeCC
Q psy3599 164 ED-SCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSD-YQGLIILWSRE 219 (223)
Q Consensus 164 ~d-g~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~ 219 (223)
.. +.|...++.. ......+...-.....|++++.+..|..+. ..+.|...++.
T Consensus 534 g~~~~I~~~~~dG---~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 534 GTPAKIKKGGLNG---VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp SSSCEEEEEETTS---CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCeEEEEecCC---CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 33 6777777765 322222222224578899997655555443 45667777764
No 327
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=32.69 E-value=37 Score=29.67 Aligned_cols=28 Identities=7% Similarity=0.159 Sum_probs=23.8
Q ss_pred CCcEEEEecCCCcEEEEEcccCcccccceee
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHKNAVNKL 185 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~ 185 (223)
+..++++-+.|..+|+|++.+ +.++...
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t---~~lv~t~ 257 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTS---FTLIQDY 257 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTT---TEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCC---CceEEee
Confidence 478999999999999999999 7766544
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=31.11 E-value=2.3e+02 Score=24.26 Aligned_cols=65 Identities=14% Similarity=0.240 Sum_probs=42.3
Q ss_pred CCcEEEE-ecCCCcEEEEEcccCcc---c------cc-ceeecccccCEEEEEEecCCCEEEEEeCCCcEEEeeCCC
Q psy3599 155 EGACVVT-GSEDSCVYFLDIQSKEH---K------NA-VNKLQGHACPVLGVSFNYDESLLATSDYQGLIILWSREK 220 (223)
Q Consensus 155 ~~~~l~s-gs~dg~v~iwd~~~~~~---~------~~-~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~ 220 (223)
+|++++. |-.+..+.++|++.... . .. ....+ -.-.....+|.++|+...|---|..|.-|++..
T Consensus 333 DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 333 DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 6766655 55578999999985100 0 00 11222 123467789999997777777899999999753
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=30.31 E-value=1.8e+02 Score=22.05 Aligned_cols=51 Identities=10% Similarity=0.012 Sum_probs=27.6
Q ss_pred CCcEEEEecC-C---------CcEEEEEcccCcccc--cceeec-ccccCEEEEEEecCCCEEEEEeCC
Q psy3599 155 EGACVVTGSE-D---------SCVYFLDIQSKEHKN--AVNKLQ-GHACPVLGVSFNYDESLLATSDYQ 210 (223)
Q Consensus 155 ~~~~l~sgs~-d---------g~v~iwd~~~~~~~~--~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~d 210 (223)
++.+++.|+. + ..+.+||..+ .+ .+.... .....-.++. .++.+++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~---~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT---NSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTT---TEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCC---CcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 5677777776 2 4688888876 32 222222 1111122222 467788888754
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=29.12 E-value=2.1e+02 Score=22.57 Aligned_cols=66 Identities=6% Similarity=0.033 Sum_probs=45.4
Q ss_pred EEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeecccccCEEEEEEecCCCEEEEEeCCCcEEEe
Q psy3599 143 VRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQGHACPVLGVSFNYDESLLATSDYQGLIILW 216 (223)
Q Consensus 143 i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw 216 (223)
+....++ .-..++.-+.-|.+++||+++ +.+++.-+-..+.|..-+-+....-++.....|.|.--
T Consensus 263 Vamqvs~-----kygviyviTK~G~ihlyDleT---gt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v 328 (365)
T 2xzh_A 263 VAMQISE-----KHDVVFLITKYGYIHLYDLET---GTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSV 328 (365)
T ss_dssp EEEEEET-----TTTEEEEEETTSEEEEEETTT---CCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEE
T ss_pred EEEEecc-----cCCEEEEEeCCcEEEEEEccc---CcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEE
Confidence 5555666 456777778899999999999 88888777666677655555444444455566665443
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=28.09 E-value=2.1e+02 Score=22.06 Aligned_cols=30 Identities=13% Similarity=0.111 Sum_probs=20.1
Q ss_pred CCCeeEEEEeecccccCCCCe-EEEEEeCCCeEEEEEecCC
Q psy3599 84 DCPITCLSWRSWISREARDPT-LLVNIAANAVCILKVLDKE 123 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~-~l~~~~~~~~~~v~i~d~~ 123 (223)
......|+|. ++++ ++++-.. + .|.+++..
T Consensus 17 l~~P~~i~~~-------pdG~~l~V~e~~-G--~i~~~~~~ 47 (353)
T 2g8s_A 17 LDHPWALAFL-------PDNHGMLITLRG-G--ELRHWQAG 47 (353)
T ss_dssp ESSEEEEEEC-------STTCCEEEEETT-T--EEEEEETT
T ss_pred CCCcEEEEEc-------CCCCEEEEEeCC-c--eEEEEeCC
Confidence 3456789999 8998 7776544 5 45555643
No 332
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=26.46 E-value=2.2e+02 Score=21.86 Aligned_cols=68 Identities=10% Similarity=0.172 Sum_probs=39.4
Q ss_pred EEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccccceeec---ccccCEEEEEEecC----CCEEEEEeCC-----
Q psy3599 143 VRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKNAVNKLQ---GHACPVLGVSFNYD----ESLLATSDYQ----- 210 (223)
Q Consensus 143 i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~---~h~~~v~~v~~~~~----~~~l~s~s~d----- 210 (223)
...+|.| ++.++++ ..+|.|++++-.. .+.+..+. ........++++|+ +.+.++-...
T Consensus 34 ~~ia~~p-----dG~l~V~-e~~g~I~~i~~g~---~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 34 WALAFLP-----DGGMLIA-ERPGRIRLFREGR---LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp EEEEECT-----TSCEEEE-ETTTEEEEEETTE---EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred eEEEEcC-----CCeEEEE-eCCCeEEEEECCC---ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 4447888 7886665 4568999888211 22222221 12346789999998 4444444322
Q ss_pred CcEEEeeCC
Q psy3599 211 GLIILWSRE 219 (223)
Q Consensus 211 ~~i~iwd~~ 219 (223)
+.|..|+..
T Consensus 105 ~~v~r~~~~ 113 (352)
T 2ism_A 105 NQVVRLRHL 113 (352)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEeC
Confidence 456666654
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=25.18 E-value=2.7e+02 Score=22.46 Aligned_cols=115 Identities=10% Similarity=0.025 Sum_probs=56.2
Q ss_pred CCCeeEEEEeecccccCCCCeEEEEEeCCCeEEEEEecCCCceEE-eeeeeccc---cCcceeEEEeeecCcccCCCcEE
Q psy3599 84 DCPITCLSWRSWISREARDPTLLVNIAANAVCILKVLDKEGAVQL-KRKFNVNH---KSSKYQVRSTFCPIMSFREGACV 159 (223)
Q Consensus 84 ~~~i~~l~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~d~~~~~~~-~~~~~~~h---~~~~~~i~~~~s~~~~~~~~~~l 159 (223)
......|+|. ++|+++++-...+ .|.+++..++... ...+.... ......+-.+|+|.... ++.+.
T Consensus 26 l~~P~~~a~~-------pdG~l~V~e~~gg--~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~-~g~lY 95 (454)
T 1cru_A 26 LNKPHALLWG-------PDNQIWLTERATG--KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKN-NPYIY 95 (454)
T ss_dssp CSSEEEEEEC-------TTSCEEEEETTTC--EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTT-SCEEE
T ss_pred CCCceEEEEc-------CCCcEEEEEcCCC--EEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCc-CCEEE
Confidence 3456799999 8999888876654 3444454433221 11111000 01111134478883211 24444
Q ss_pred EEecC------------CCcEEEEEcccCc----ccccce-eecc-cccCEEEEEEecCCCEEEEEe
Q psy3599 160 VTGSE------------DSCVYFLDIQSKE----HKNAVN-KLQG-HACPVLGVSFNYDESLLATSD 208 (223)
Q Consensus 160 ~sgs~------------dg~v~iwd~~~~~----~~~~~~-~~~~-h~~~v~~v~~~~~~~~l~s~s 208 (223)
++-+. ...|.-++..... ..+.+. .+.. .......+.|.|+|.+.++.+
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 44332 1245555543200 011222 2221 123468999999999877755
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=25.18 E-value=3.3e+02 Score=23.40 Aligned_cols=111 Identities=11% Similarity=0.003 Sum_probs=52.9
Q ss_pred CCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccC-cceeEE-EeeecCcccCCCcEEEEecC--C-----CcEEEEE
Q psy3599 102 DPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKS-SKYQVR-STFCPIMSFREGACVVTGSE--D-----SCVYFLD 172 (223)
Q Consensus 102 ~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~-~~~~i~-~~~s~~~~~~~~~~l~sgs~--d-----g~v~iwd 172 (223)
++.+++.|+.+.-..+.+||..+..-..... .+... ...... +.+... .+.+++.|+. + ..+.+||
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~-~g~~p~~r~~~~a~v~~~~----~~~iyv~GG~~~~~~~~~~~v~~yd 574 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTP-KDEFFQNSLVSAGLEFDPV----SKQGIILGGGFMDQTTVSDKAIIFK 574 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCC-SSGGGGSCCBSCEEEEETT----TTEEEEECCBCTTSSCBCCEEEEEE
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccC-CCCCCCcccceeEEEEeCC----CCEEEEECCcCCCCCeeeCcEEEEE
Confidence 6677777663321146678887764322110 00000 000011 123331 2667777776 2 3588899
Q ss_pred cccCccccc--------ceeec-ccccCEEEEEEecCCCEEEEEeC--------CCcEEEeeCCCC
Q psy3599 173 IQSKEHKNA--------VNKLQ-GHACPVLGVSFNYDESLLATSDY--------QGLIILWSREKH 221 (223)
Q Consensus 173 ~~~~~~~~~--------~~~~~-~h~~~v~~v~~~~~~~~l~s~s~--------d~~i~iwd~~~~ 221 (223)
+.+ ... +.... .......++. ..++.+++.|+. ...+.+||+.+.
T Consensus 575 ~~~---~~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 575 YDA---ENATEPITVIKKLQHPLFQRYGSQIKY-ITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp ECT---TCSSCCEEEEEEEECGGGCCBSCEEEE-EETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred ccC---CccccceEEEEcCCCCCCCcccceEEE-eCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 887 431 11110 1111122222 233677777774 345888998764
No 335
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=24.63 E-value=2.6e+02 Score=22.08 Aligned_cols=103 Identities=14% Similarity=0.222 Sum_probs=60.8
Q ss_pred CCCeEEEEEeCCCeEEEEEecCCCceEEeeeeeccccCcceeEEEeeecCcccCCCcEEEEecCCCcEEEEEcccCcccc
Q psy3599 101 RDPTLLVNIAANAVCILKVLDKEGAVQLKRKFNVNHKSSKYQVRSTFCPIMSFREGACVVTGSEDSCVYFLDIQSKEHKN 180 (223)
Q Consensus 101 ~~~~~l~~~~~~~~~~v~i~d~~~~~~~~~~~~~~h~~~~~~i~~~~s~~~~~~~~~~l~sgs~dg~v~iwd~~~~~~~~ 180 (223)
|....+|.-. +. .+.++|+++...+... .....+ +--.|-. .+.|+--+ +..|+-|++... ..
T Consensus 76 P~~~ViALra-g~--~LQiFnletK~klks~---~~~e~V--vfWkWis------~~~L~lVT-~taVyHWs~~~~--s~ 138 (365)
T 2xzh_A 76 PASKVIALKA-GK--TLQIFNIEMKSKMKAH---TMTDDV--TFWKWIS------LNTVALVT-DNAVYHWSMEGE--SQ 138 (365)
T ss_dssp SSSSEEEEEE-TT--EEEEEETTTTEEEEEE---ECSSCE--EEEEECS------SSEEEEEE-SSEEEEEESSTT--CC
T ss_pred CCccEEEEec-CC--eEEEechHHhhhhcce---ecCCcc--EEEEecC------CCeEEEEc-CCcEEEEcccCC--CC
Confidence 6777777655 45 7899999988776542 112232 3324543 34443333 347999998751 35
Q ss_pred cceeeccccc----CEEEEEEecCCCEEEEEe-------CCCcEEEeeCCC
Q psy3599 181 AVNKLQGHAC----PVLGVSFNYDESLLATSD-------YQGLIILWSREK 220 (223)
Q Consensus 181 ~~~~~~~h~~----~v~~v~~~~~~~~l~s~s-------~d~~i~iwd~~~ 220 (223)
+.+.+..|.. .|..-..+++..-++..+ ..|.+.+|..+.
T Consensus 139 P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 139 PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT
T ss_pred CceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc
Confidence 5555554433 566666677777554443 236677887664
No 336
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=23.63 E-value=2.8e+02 Score=22.84 Aligned_cols=59 Identities=12% Similarity=0.157 Sum_probs=36.9
Q ss_pred cEEEEecCCCcEEEEEcccCcc-----cccceeecc--cccCEEEEEEecCCCEEEEEeCCCcEEE
Q psy3599 157 ACVVTGSEDSCVYFLDIQSKEH-----KNAVNKLQG--HACPVLGVSFNYDESLLATSDYQGLIIL 215 (223)
Q Consensus 157 ~~l~sgs~dg~v~iwd~~~~~~-----~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~d~~i~i 215 (223)
..++.|..+|.|.-.-+..... ...+..+.. ...+|..+.++++...|..++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4677889999875433321000 112223332 3468899999999999999988776665
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=23.15 E-value=1.1e+02 Score=23.93 Aligned_cols=30 Identities=17% Similarity=0.081 Sum_probs=0.0
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeCCCCC
Q psy3599 193 LGVSFNYDESLLATSDYQGLIILWSREKHE 222 (223)
Q Consensus 193 ~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~ 222 (223)
+.++|.|+|.++++--..|.|++++...++
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCc
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=21.58 E-value=2.8e+02 Score=21.30 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=35.7
Q ss_pred CCcEEEEecCCCcEEEEEcccCcccccce--e-ecccccCEEEEEEecCCCEEEEEe-CCCcEEEeeC
Q psy3599 155 EGACVVTGSEDSCVYFLDIQSKEHKNAVN--K-LQGHACPVLGVSFNYDESLLATSD-YQGLIILWSR 218 (223)
Q Consensus 155 ~~~~l~sgs~dg~v~iwd~~~~~~~~~~~--~-~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~ 218 (223)
++.++++.-..+.|...++.. +.... . +......+..+++.|+|.+.++.. .+| +||-+
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNG---DKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSG--ELLKV 350 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEET---TEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTE--EEEEE
T ss_pred CCcEEEEEccCCEEEEEEeCC---CeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCC--EEEEE
Confidence 466777766677777777665 33221 1 222234789999999999776543 344 44443
Done!