BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy360
(199 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 123 bits (308), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 68/92 (73%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
+LKF+ EIGRGSFKTVY+GLDT+T V VAWCELQ++KL K LKGLQHPN
Sbjct: 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
IV FY WE T+ +K IVLVTEL TSGTLKT
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKT 118
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 47/75 (62%), Gaps = 16/75 (21%)
Query: 15 TPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGP 74
TPEF APE YEE YDESVDVYAFG C LE +TSEYPY EC AQIY++V
Sbjct: 193 TPEFXAPEXYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVT--------- 243
Query: 75 KVVFQPISGVKPQSF 89
SGVKP SF
Sbjct: 244 -------SGVKPASF 251
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
L +E+IG GSF TV+R + VAV L E+ + ++K L+HPNI
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVK--ILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
V F G +T+ + +VTE ++ G+L
Sbjct: 97 VLFMG----AVTQPPNLSIVTEYLSRGSL 121
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 15 TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
TPE+MAPE + +E +E DVY+FG+ + E++T + P+ + PAQ+ V
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN-LNPAQVVAAV 251
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
L +E+IG GSF TV+R + VAV L E+ + ++K L+HPNI
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVK--ILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
V F G +T+ + +VTE ++ G+L
Sbjct: 97 VLFMG----AVTQPPNLSIVTEYLSRGSL 121
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 15 TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
TPE+MAPE + +E +E DVY+FG+ + E++T + P+ + PAQ+ V
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN-LNPAQVVAAV 251
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
+EE+G+G+F V R + TG+ A + KKL+ + + LQHPNIV
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
+ ++ + + LV +L+T G L
Sbjct: 70 HD----SIQEESFHYLVFDLVTGGEL 91
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
+EE+G+G+F V R + TG+ A + KKL+ + + LQHPNIV
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
+ ++ + + LV +L+T G L
Sbjct: 71 HD----SIQEESFHYLVFDLVTGGEL 92
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
+EE+G+G+F V R + TG+ A + KKL+ + + LQHPNIV
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
+ ++ + + LV +L+T G L
Sbjct: 71 HD----SIQEESFHYLVFDLVTGGEL 92
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 112 EEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
+EE+G+G+F V R + TG+ A + KKL+ + + LQHPNIV
Sbjct: 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
+ ++ + + LV +L+T G L
Sbjct: 94 HD----SIQEESFHYLVFDLVTGGEL 115
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKXXXXXXXXXXXMLKGLQHPN 167
+ E++IGRG F VYR GV VA ++Q L + +LK L HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ +Y + + + +V EL +G L
Sbjct: 94 VIKYYA----SFIEDNELNIVLELADAGDL 119
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPY 51
TP +M+PE ++E Y+ D+++ G + EM+ + P+
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 247
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 273
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 273
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 273
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADEPIQIYEKIVS 252
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 245
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 253
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLN--KXXXXXXXXXXXMLKGLQHPNIVS 170
E++G G++ TVY+GL+ TGV VA L+E KL+ + ++K L+H NIV
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVA---LKEVKLDSEEGTPSTAIREISLMKELKHENIVR 67
Query: 171 FYGYWEVTLTKRKYIVLVTELMTS 194
Y +V T+ K + LV E M +
Sbjct: 68 LY---DVIHTENK-LTLVFEFMDN 87
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++APE+ + Y+++VD +A G+ + +M+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE +APE+ + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
EE+G+G+F V R + TG A + KKL+ + + L+HPNIV +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
++++ + LV +L+T G L
Sbjct: 70 D----SISEEGFHYLVFDLVTGGEL 90
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
EE+G+G+F V R + TG A + KKL+ + + L+HPNIV +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
++++ + LV +L+T G L
Sbjct: 70 D----SISEEGFHYLVFDLVTGGEL 90
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 15 TPEFMAPEM-YEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
TPE++AP + + Y+++VD +A G+ + EM+ YP P QIY+K+VS
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVS 252
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLK-GLQHPNIVSFYG 173
+G+GSF VYR TG+ VA + +K + K + L+HP+I+ Y
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 174 YWEVTLTKRKYIVLVTELMTSGTLK 198
Y+E + Y+ LV E+ +G +
Sbjct: 79 YFEDS----NYVYLVLEMCHNGEMN 99
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF ++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 71
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
QH NIV + G R+ + L+ E + G+L+
Sbjct: 72 QHDNIVKYKGV--CYSAGRRNLKLIMEFLPYGSLR 104
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 75
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 76 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 109
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 68
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 69 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 102
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 71
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 72 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 105
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 68
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 69 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 102
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 74
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 75 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 108
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 67
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 68 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 101
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 73
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 74 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 107
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 72
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 73 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 106
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 71
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 72 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 105
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 99
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
QH NIV + G R+ + L+ E + G+L+
Sbjct: 100 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLR 132
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 69
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 70 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 103
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 66
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 67 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 100
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 68
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 69 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 102
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 86
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 87 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 120
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 108 YLKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+LKF +++G+G+F +V Y L TG VA +LQ + +LK L
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSL 86
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
QH NIV + G R+ + L+ E + G+L+
Sbjct: 87 QHDNIVKYKGV--CYSAGRRNLKLIMEYLPYGSLRD 120
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
EE+G+G+F V R + G A + KKL+ + + L+HPNIV +
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
++++ + L+ +L+T G L
Sbjct: 77 D----SISEEGHHYLIFDLVTGGEL 97
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
EE+G+G+F V R + G A + KKL+ + + L+HPNIV +
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
++++ + L+ +L+T G L
Sbjct: 88 D----SISEEGHHYLIFDLVTGGEL 108
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM---ECIGPAQIYKKVVSVSIT 70
TP FMAPE+ E YD SVD +A G+ + EM + P+ E + ++ ++V+ ++T
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM---ECIGPAQIYKKVVSVSIT 70
TP FMAPE+ E YD SVD +A G+ + EM + P+ E + ++ ++V+ ++T
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM---ECIGPAQIYKKVVSVSIT 70
TP FMAPE+ E YD SVD +A G+ + EM + P+ E + ++ ++V+ ++T
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM---ECIGPAQIYKKVVSVSIT 70
TP FMAPE+ E YD SVD +A G+ + EM + P+ E + ++ ++V+ ++T
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 11 RTQRTPEFMAPEMYEE------HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
R+ +MAPE + YD DV++ G+ ++E++T ++PY C ++ KV
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242
Query: 65 V 65
+
Sbjct: 243 L 243
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 15 TPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ E+ YD D+++FG+ +E++T PY
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 15 TPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ E+ YD D+++FG+ +E++T PY
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKL---NKXXXXXXXXXXXMLKGLQHPNIVSF 171
IG+GS+ V ++ QT A + + K+ N ++K L HPNI
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 172 YGYWEVTLTKRKYIVLVTELMTSGTL 197
Y +E +YI LV EL G L
Sbjct: 94 YEVYE----DEQYICLVMELCHGGHL 115
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 18 FMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPA 58
+MAPE++E +Y E DV+++G+ + E+ T P+ E GPA
Sbjct: 170 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 211
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
++ EE +GRG+F V + VA+ E + ++ L + HPNI
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESER------KAFIVELRQLSRVNHPNI 64
Query: 169 VSFYG 173
V YG
Sbjct: 65 VKLYG 69
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 15 TPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
PE + PE+ ++ Y D+++ G+ M+E++ +PY P Q K+VV
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 271
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 18 FMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPA 58
+MAPE++E +Y E DV+++G+ + E+ T P+ E GPA
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
++ EE +GRG+F V + VA+ E + ++ L + HPNI
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESER------KAFIVELRQLSRVNHPNI 63
Query: 169 VSFYG 173
V YG
Sbjct: 64 VKLYG 68
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E+IG+G+F V R + TG A + KKL+ + + L+H NIV +
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
++++ + LV +L+T G L
Sbjct: 70 D----SISEEGFHYLVFDLVTGGEL 90
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 15 TPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
PE + PE+ ++ Y D+++ G+ M+E++ +PY P Q K+VV
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
GY + +E+IG GS+ R + T + E K ++K +L+ QHP
Sbjct: 23 GY-EVKEDIGVGSYSVCKRCIHKATNM-----EFAVKIIDKSKRDPTEEIEILLRYGQHP 76
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
NI++ ++ KY+ +VTELM G L
Sbjct: 77 NIITLKDVYD----DGKYVYVVTELMKGGEL 103
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVS 66
T F+APE+ E YD + D+++ G+ + M T P+ GP +++++
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN--GPDDTPEEILA 233
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKXXXXXXXXXXXMLKGLQHPNIVSFYG 173
+G+GSF V D TG A + ++++ K +LK L HPNI+ Y
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
++E + Y LV E+ T G L
Sbjct: 94 FFE----DKGYFYLVGEVYTGGEL 113
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 109 LKFEEEIGRGSFKTVYRG--LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
L E+IGRG+F V+ G T VAV C + L +LK HP
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC---RETLPPDLKAKFLQEARILKQYSHP 172
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
NIV G T+++ I +V EL+ G T
Sbjct: 173 NIVRLIG----VCTQKQPIYIVMELVQGGDFLT 201
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 109 LKFEEEIGRGSFKTVYRG--LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
L E+IGRG+F V+ G T VAV C + L +LK HP
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC---RETLPPDLKAKFLQEARILKQYSHP 172
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
NIV G T+++ I +V EL+ G T
Sbjct: 173 NIVRLIG----VCTQKQPIYIVMELVQGGDFLT 201
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKXXXXXXXXXXXMLKGLQHPNIVSFYG 173
+G+GSF V D TG A + ++++ K +LK L HPNI+ Y
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
++E + Y LV E+ T G L
Sbjct: 117 FFE----DKGYFYLVGEVYTGGEL 136
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKXXXXXXXXXXXMLKGLQHPNIVSFYG 173
+G+GSF V D TG A + ++++ K +LK L HPNI+ Y
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
++E + Y LV E+ T G L
Sbjct: 100 FFE----DKGYFYLVGEVYTGGEL 119
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKXXXXXXXXXXXMLKGLQHPNIVSFYG 173
+G+GSF V D TG A + ++++ K +LK L HPNI+ Y
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
++E + Y LV E+ T G L
Sbjct: 118 FFE----DKGYFYLVGEVYTGGEL 137
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Query: 15 TPEFMAPEMY------EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS 68
TP +MAPE+ + YD DV++ G+ ++EM+ E P+ E + P ++ K
Sbjct: 172 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE-LNPMRVLLK----- 225
Query: 69 ITSAGPKVVFQP 80
I + P + QP
Sbjct: 226 IAKSEPPTLAQP 237
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + ++ IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + LV E + G
Sbjct: 75 NIVKLF---EVIETE-KTLYLVMEYASGG 99
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Query: 15 TPEFMAPEMY------EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS 68
TP +MAPE+ + YD DV++ G+ ++EM+ E P+ E + P ++ K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE-LNPMRVLLK----- 251
Query: 69 ITSAGPKVVFQP 80
I + P + QP
Sbjct: 252 IAKSEPPTLAQP 263
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Query: 15 TPEFMAPEMY------EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS 68
TP +MAPE+ + YD DV++ G+ ++EM+ E P+ E + P ++ K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE-LNPMRVLLK----- 251
Query: 69 ITSAGPKVVFQP 80
I + P + QP
Sbjct: 252 IAKSEPPTLAQP 263
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 12/72 (16%)
Query: 15 TPEFMAPEMY------EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS 68
TP +MAPE+ + YD DV++ G+ ++EM+ E P+ E + P ++ K
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE-LNPMRVLLK----- 251
Query: 69 ITSAGPKVVFQP 80
I + P + QP
Sbjct: 252 IAKSEPPTLAQP 263
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 15 TPEFMAPE------MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS 68
TP +MAPE M + YD D+++ G+ ++EM+ E P+ E + P ++ K
Sbjct: 172 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE-LNPMRVLLK----- 225
Query: 69 ITSAGPKVVFQP 80
I + P + P
Sbjct: 226 IAKSDPPTLLTP 237
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 15 TPEFMAPE------MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVS 68
TP +MAPE M + YD D+++ G+ ++EM+ E P+ E + P ++ K
Sbjct: 180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE-LNPMRVLLK----- 233
Query: 69 ITSAGPKVVFQP 80
I + P + P
Sbjct: 234 IAKSDPPTLLTP 245
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 27 HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI 69
HY+E +D+Y+ G+ EM YP+ + I KK+ SVSI
Sbjct: 207 HYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSI 246
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 27 HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI 69
HY+E +D+Y+ G+ EM YP+ + I KK+ SVSI
Sbjct: 207 HYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSI 246
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKL-NKXXXXXXXXXXXMLKGLQHPNIVSFYG 173
+G+GSF V D TG A + ++++ K +LK L HPNI Y
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
++E + Y LV E+ T G L
Sbjct: 94 FFE----DKGYFYLVGEVYTGGEL 113
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 76 ITLHEVYE----NKTDVILILELVAGGEL 100
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 76 ITLHEVYE----NKTDVILILELVAGGEL 100
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMEC 54
TP +MAPE+ ++ YD D+++ G+ +E++ E P+ E
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVA 136
E+IG+GSF V++G+D +T VA
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVA 36
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMEC 54
TP +MAPE+ ++ YD D+++ G+ +E++ E P+ E
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVA 136
E+IG+GSF V++G+D +T VA
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVA 36
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILIGELVAGGEL 101
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMEC 54
TP +MAPE+ ++ YD D+++ G+ +E++ E P+ E
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVA 136
E+IG+GSF V++G+D +T VA
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVA 51
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
M Y K E+ +G G++ VY+ D+Q G VA ++ ++ +LK L
Sbjct: 20 MEKYQKLEK-VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELM 192
HPNIVS + + + LV E M
Sbjct: 78 HPNIVSLID----VIHSERCLTLVFEFM 101
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYG 173
+IG GS+ V++ + TG VA + E + + MLK L+HPN+V+
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL- 68
Query: 174 YWEVTLTKRK 183
EV KR+
Sbjct: 69 --EVFRRKRR 76
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
M Y K E+ +G G++ VY+ D+Q G VA ++ ++ +LK L
Sbjct: 20 MEKYQKLEK-VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELM 192
HPNIVS + + + LV E M
Sbjct: 78 HPNIVSLID----VIHSERCLTLVFEFM 101
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 15 TPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
PE + PE+ ++ Y D+++ G+ +E++ +PY P Q K+VV
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMEC 54
TP +MAPE+ ++ YD D+++ G+ +E++ E P+ E
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVA 136
E+IG+GSF V++G+D +T VA
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVA 56
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q +A L + +L K ++ L+HPNI+ Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
Y+ RK I L+ E G L
Sbjct: 82 YFH----DRKRIYLMLEFAPRGEL 101
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A +++++ +LK +QHPN+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + ++L+ EL+ G L
Sbjct: 77 ITLHEVYE----NKTDVILILELVAGGEL 101
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q +A L + +L K ++ L+HPNI+ Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
Y+ RK I L+ E G L
Sbjct: 82 YFH----DRKRIYLMLEFAPRGEL 101
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + TG A +++++L+ +L+ ++HPNI
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + +VL+ EL++ G L
Sbjct: 71 ITLHDIFE----NKTDVVLILELVSGGEL 95
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + TG A +++++L+ +L+ ++HPNI
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + +VL+ EL++ G L
Sbjct: 78 ITLHDIFE----NKTDVVLILELVSGGEL 102
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q +A L + +L K ++ L+HPNI+ Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
Y+ RK I L+ E G L
Sbjct: 83 YFH----DRKRIYLMLEFAPRGEL 102
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
++ + +GRGSF V+R D QTG C +++ +L GL P
Sbjct: 59 WMTHQPRVGRGSFGEVHRMKDKQTGFQ---CAVKKVRLE----VFRVEELVACAGLSSPR 111
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
IV YG + + ++ + EL+ G+L
Sbjct: 112 IVPLYG----AVREGPWVNIFMELLEGGSL 137
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
++ + +GRGSF V+R D QTG C +++ +L GL P
Sbjct: 75 WMTHQPRVGRGSFGEVHRMKDKQTGFQ---CAVKKVRLE----VFRVEELVACAGLSSPR 127
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
IV YG + + ++ + EL+ G+L
Sbjct: 128 IVPLYG----AVREGPWVNIFMELLEGGSL 153
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G F VY G+ + + VA L+E + ++K ++H
Sbjct: 10 RTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 66
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 67 PNLVQLLG----VCTREPPFYIITEFMTYGNL 94
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + LV E + G
Sbjct: 74 NIVKLF---EVIETE-KTLYLVMEYASGG 98
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + LV E + G
Sbjct: 74 NIVKLF---EVIETE-KTLYLVMEYASGG 98
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + LV E + G
Sbjct: 74 NIVKLF---EVIETE-KTLYLVMEYASGG 98
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + LV E + G
Sbjct: 74 NIVKLF---EVIETE-KTLYLVMEYASGG 98
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + LV E + G
Sbjct: 74 NIVKLF---EVIETE-KTLYLVMEYASGG 98
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + LV E + G
Sbjct: 67 NIVKLF---EVIETE-KTLYLVMEYASGG 91
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKXX--XXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A + + ++ + ++ +L+ + HPNI
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E R +VL+ EL++ G L
Sbjct: 78 ITLHDVYE----NRTDVVLILELVSGGEL 102
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E +G+G F + +TG + EL + ++ +++ L+HPN++ F
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELI--RFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTLK 198
G L K K + +TE + GTL+
Sbjct: 74 G----VLYKDKRLNFITEYIKGGTLR 95
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEM 44
P +MAPEM YDE VDV++FG+ + E+
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 173 GYWEVTLTKRKYIVLVTELMT 193
+V T+ K + LV E ++
Sbjct: 72 ---DVIHTENK-LYLVFEFLS 88
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
IG G+ V DT G+ VA +L N+ +LK + H NI+S
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 175 W--EVTLTKRKYIVLVTELMTSG 195
+ + TL + + + LV ELM +
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDAN 112
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
++ + +GRGSF V+R D QTG C +++ +L GL P
Sbjct: 73 WMTHQPRLGRGSFGEVHRMKDKQTGFQ---CAVKKVRLE----VFRVEELVACAGLSSPR 125
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
IV YG + + ++ + EL+ G+L
Sbjct: 126 IVPLYG----AVREGPWVNIFMELLEGGSL 151
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 173 GYWEVTLTKRKYIVLVTELMT 193
+V T+ K + LV E ++
Sbjct: 70 ---DVIHTENK-LYLVFEFLS 86
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 173 GYWEVTLTKRKYIVLVTELMT 193
+V T+ K + LV E ++
Sbjct: 71 ---DVIHTENK-LYLVFEFLS 87
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 173 GYWEVTLTKRKYIVLVTELMT 193
+V T+ K + LV E ++
Sbjct: 72 ---DVIHTENK-LYLVFEFLS 88
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
IG G+ V DT G+ VA +L N+ +LK + H NI+S
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 175 W--EVTLTKRKYIVLVTELMTSG 195
+ + TL + + + LV ELM +
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDAN 114
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
+LK L HPNI+ + +E +KY LVTE G L
Sbjct: 99 LLKSLDHPNIIKLFDVFE----DKKYFYLVTEFYEGGEL 133
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
E+IG G++ VY+ + TG VA +++ + +LK L HPNIV
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 16 PEFMAPEMYEEHYDESVDVYAFGMCMLEMSTS-EYPY 51
P +MAPE+ + Y + DV++ G+ +LE++ + E P+
Sbjct: 220 PRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPH 256
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
TP+++APE+ + Y +SVD +AFG+ + EM + P+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TPE++APE+ E++ Y +VD + G+ M EM P+
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKX----XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + TG A +++++L +L+ ++HPNI
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E + +VL+ EL++ G L
Sbjct: 92 ITLHDIFE----NKTDVVLILELVSGGEL 116
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPY 51
TP+++APE + + Y+ SVD ++FG+ + EM + P+
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.1 bits (74), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
TP+++APE+ + Y +SVD +AFG+ + EM + P+
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.1 bits (74), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYP 50
TP +MAPE+ ++ YD D+++ G+ +E++ E P
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVA 136
E IG+GSF V++G+D +T VA
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVA 52
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 33.1 bits (74), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
TP +MAPE+ Y VD+++ G+ ++EM E PY P Q K++
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-SPVQAMKRL 253
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.1 bits (74), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
GY+ +E IG GS+ R + T + A K ++K +L+ QHP
Sbjct: 28 GYV-VKETIGVGSYSECKRCVHKATNMEYAV-----KVIDKSKRDPSEEIEILLRYGQHP 81
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
NI++ ++ K++ LVTELM G L
Sbjct: 82 NIITLKDVYD----DGKHVYLVTELMRGGEL 108
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYME--CIGPAQIYKKVVSVSITS 71
T F+APE+ + YDE D+++ G+ + M P+ P +I ++ S T
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 72 AG 73
+G
Sbjct: 248 SG 249
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + L+ E + G
Sbjct: 75 NIVKLF---EVIETE-KTLYLIMEYASGG 99
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPE-MYEEHYDESVDVYAFGMCMLEMSTSEYPY 51
TP+++APE + + Y+ SVD ++FG+ + EM + P+
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
GY+ +E IG GS+ R + T + A K ++K +L+ QHP
Sbjct: 28 GYV-VKETIGVGSYSECKRCVHKATNMEYAV-----KVIDKSKRDPSEEIEILLRYGQHP 81
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
NI++ ++ K++ LVTELM G L
Sbjct: 82 NIITLKDVYD----DGKHVYLVTELMRGGEL 108
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYME--CIGPAQIYKKVVSVSITS 71
T F+APE+ + YDE D+++ G+ + M P+ P +I ++ S T
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 72 AG 73
+G
Sbjct: 248 SG 249
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK--LNKXXXXXXXXXXXMLKGLQH 165
Y+K EE IG G F V RG G + ++ K + ++ +H
Sbjct: 17 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 76
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
PNI+ G +T ++++TE M +G L +
Sbjct: 77 PNIIRLEG----VVTNSMPVMILTEFMENGALDS 106
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKK--LNKXXXXXXXXXXXMLKGLQH 165
Y+K EE IG G F V RG G + ++ K + ++ +H
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 74
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
PNI+ G +T ++++TE M +G L +
Sbjct: 75 PNIIRLEG----VVTNSMPVMILTEFMENGALDS 104
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G+G++ VY G D V +A E+ E+ + + K L+H NIV + G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLG- 72
Query: 175 WEVTLTKRKYIVLVTELMTSGTL 197
+ ++ +I + E + G+L
Sbjct: 73 ---SFSENGFIKIFMEQVPGGSL 92
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 15 TPEFMAPEMYEEH---YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
T ++MAPE+ ++ Y ++ D+++ G ++EM+T + P+ E P KV
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G+G++ VY G D V +A E+ E+ + + K L+H NIV + G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLG- 86
Query: 175 WEVTLTKRKYIVLVTELMTSGTL 197
+ ++ +I + E + G+L
Sbjct: 87 ---SFSENGFIKIFMEQVPGGSL 106
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 15 TPEFMAPEMYEEH---YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
T ++MAPE+ ++ Y ++ D+++ G ++EM+T + P+ E P KV
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 238
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ Y VD+++ G+ ++EM E PY
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 73
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 74 PNLVQLLG----VCTREPPFYIITEFMTYGNL 101
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 73
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 74 PNLVQLLG----VCTREPPFYIITEFMTYGNL 101
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ Y VD+++ G+ ++EM E PY
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN ++K L HP
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + L+ E + G
Sbjct: 72 NIVKLF---EVIETE-KTLYLIMEYASGG 96
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ Y VD+++ G+ ++EM E PY
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI 69
TP+++APE+ + Y++S+D ++FG+ + EM P+ + + Y+K+++ +
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILNAEL 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ Y VD+++ G+ ++EM E PY
Sbjct: 233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 32.7 bits (73), Expect = 0.12, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
T +++APE+ E+ Y +VD ++FG E T P++ P Q + KV
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
Score = 30.0 bits (66), Expect = 0.83, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
G + +E +G G F V R + TG VA+ C ++L+ ++K L
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC---RQELSPKNRERWCLEIQIMKKLN 70
Query: 165 HPNIVS 170
HPN+VS
Sbjct: 71 HPNVVS 76
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 68
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 69 PNLVQLLG----VCTREPPFYIITEFMTYGNL 96
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ Y VD+++ G+ ++EM E PY
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 76 YFHD--ATRVYLIL 87
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 224
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
TP ++APE+ E Y SVD +A G+ M EM P+
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 79 YFHD--ATRVYLIL 90
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+GRGSF V+R D QTG C +++ +L GL P IV YG
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQ---CAVKKVRLE----VFRAEELMACAGLTSPRIVPLYG- 133
Query: 175 WEVTLTKRKYIVLVTELMTSGTL 197
+ + ++ + EL+ G+L
Sbjct: 134 ---AVREGPWVNIFMELLEGGSL 153
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 32.7 bits (73), Expect = 0.13, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
T +++APE+ E+ Y +VD ++FG E T P++ P Q + KV
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
Score = 30.0 bits (66), Expect = 0.83, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
G + +E +G G F V R + TG VA+ C ++L+ ++K L
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC---RQELSPKNRERWCLEIQIMKKLN 71
Query: 165 HPNIVS 170
HPN+VS
Sbjct: 72 HPNVVS 77
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 11 RTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPY 51
R PE + P + YD DV++ G+ + E++T +PY
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ Y VD+++ G+ ++EM E PY
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
TP ++APE+ E Y SVD +A G+ M EM P+
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 102 YFHD--ATRVYLIL 113
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 250
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
TP ++APE+ E Y SVD +A G+ M EM P+
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 72
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 73 PNLVQLLG----VCTREPPFYIITEFMTYGNL 100
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 13 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 69
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 70 PNLVQLLG----VCTREPPFYIITEFMTYGNL 97
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 70
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 71 PNLVQLLG----VCTREPPFYIITEFMTYGNL 98
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 76 YFHD--ATRVYLIL 87
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 81 YFHD--ATRVYLIL 92
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 229
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 76 YFHD--ATRVYLIL 87
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 224
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 68
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 69 PNLVQLLG----VCTREPPFYIITEFMTYGNL 96
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 76 YFHD--ATRVYLIL 87
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 224
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 78 YFHD--ATRVYLIL 89
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 226
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 75 YFHD--ATRVYLIL 86
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 223
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 81 YFHD--ATRVYLIL 92
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 229
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 79 YFHD--ATRVYLIL 90
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 227
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 107 GYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
G + + IG+G+F V TG VA + + +LN + K L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSG 195
NIV + EV T+ K + LV E + G
Sbjct: 74 NIVKLF---EVIETE-KTLYLVXEYASGG 98
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 102 YFHD--ATRVYLIL 113
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 250
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 73
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 74 PNLVQLLG----VCTREPPFYIITEFMTYGNL 101
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 81 YFHD--ATRVYLIL 92
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 229
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 78 YFHD--ATRVYLIL 89
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 226
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+GRGSF V+R D QTG C +++ +L GL P IV YG
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQ---CAVKKVRLE----VFRAEELMACAGLTSPRIVPLYG- 152
Query: 175 WEVTLTKRKYIVLVTELMTSGTL 197
+ + ++ + EL+ G+L
Sbjct: 153 ---AVREGPWVNIFMELLEGGSL 172
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 76 YFHD--ATRVYLIL 87
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 224
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 93 YFHD--ATRVYLIL 104
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 241
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 68
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 69 PNLVQLLG----VCTREPPFYIITEFMTYGNL 96
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 81 YFHD--ATRVYLIL 92
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 229
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 79 YFHD--ATRVYLIL 90
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 227
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 80 YFHD--ATRVYLIL 91
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 79 YFHD--ATRVYLIL 90
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 70
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 71 PNLVQLLG----VCTREPPFYIITEFMTYGNL 98
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 77 YFHD--ATRVYLIL 88
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 225
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 77 YFHD--ATRVYLIL 88
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 225
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 73
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 74 PNLVQLLG----VCTREPPFYIITEFMTYGNL 101
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 25 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 81
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 82 PNLVQLLG----VCTREPPFYIITEFMTYGNL 109
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 79 YFHD--ATRVYLIL 90
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 227
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 76 YFHD--ATRVYLIL 87
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 224
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 59/167 (35%), Gaps = 27/167 (16%)
Query: 38 GMCMLE-MSTSEYPYMECIGPAQIYKKVVSVSITSAGPKVVFQPISGVKPQSFXXXXXXX 96
G+C +E +STS +YKK S ++ G V +S + P+
Sbjct: 36 GICSIEELSTS------------LYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVV 83
Query: 97 XXXXXXXXMRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXX 152
+ F E IGRG F VY G C + K LN+
Sbjct: 84 IGPSSLI-----VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQ 136
Query: 153 XXXXXXMLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
++K HPN++S G + L ++V M G L+
Sbjct: 137 FLTEGIIMKDFSHPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 180
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 70
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 71 PNLVQLLG----VCTREPPFYIITEFMTYGNL 98
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
TP ++APE+ E Y SVD +A G+ M EM P+
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 77 YFHD--ATRVYLIL 88
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNAM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 79 YFHD--ATRVYLIL 90
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 227
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 76 YFHD--ATRVYLIL 87
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 224
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGL-DTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
R +K +++G G F V+ G + T VAV + K ++K LQ
Sbjct: 11 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAV-----KTLKPGTMSVQAFLEEANLMKTLQ 65
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
H +V Y +TK + I ++TE M G+L
Sbjct: 66 HDKLVRLYA----VVTKEEPIYIITEFMAKGSL 94
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 10 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 66
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 67 PNLVQLLG----VCTREPPFYIITEFMTYGNL 94
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 81 YFHD--ATRVYLIL 92
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PE E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 229
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 68
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 69 PNLVQLLG----VCTREPPFYIITEFMTYGNL 96
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 80 YFHD--ATRVYLIL 91
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 18 FMAPEMYEEH----YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG 73
+MAPE+ Y DVYAFG+ + E+ T + PY QI + V S++
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 235
Query: 74 PKV 76
KV
Sbjct: 236 SKV 238
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 18 FMAPEMYEEH----YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG 73
+MAPE+ Y DVYAFG+ + E+ T + PY QI + V S++
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247
Query: 74 PKV 76
KV
Sbjct: 248 SKV 250
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q+ +A L + +L K ++ L+HPNI+ YG
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 80 YFHD--ATRVYLIL 91
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
Y E IGRGS+ V + Q G + + K ++K L HPN
Sbjct: 27 YYTLENTIGRGSWGEV--KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
I+ Y +E I LV EL T G L
Sbjct: 85 IIRLYETFEDNTD----IYLVMELCTGGEL 110
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYK 62
T +M+PE + HY D+++ G+ ++EM+ YP G I++
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE 233
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
Y E IGRGS+ V + Q G + + K ++K L HPN
Sbjct: 10 YYTLENTIGRGSWGEV--KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
I+ Y +E I LV EL T G L
Sbjct: 68 IIRLYETFEDNTD----IYLVMELCTGGEL 93
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 18 FMAPEMYEEH----YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAG 73
+MAPE+ Y DVYAFG+ + E+ T + PY QI + V S++
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247
Query: 74 PKV 76
KV
Sbjct: 248 SKV 250
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 15 TPEFMAPEMYEE--HYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI 69
T ++A E+ + HY+E +D Y+ G+ E YP+ I KK+ SVSI
Sbjct: 193 TAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKLRSVSI 246
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 275
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 276 PNLVQLLG----VCTREPPFYIITEFMTYGNL 303
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 258 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 314
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 315 PNLVQLLG----VCTREPPFYIITEFMTYGNL 342
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 180 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 236
Query: 65 V 65
V
Sbjct: 237 V 237
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 88 FTPARSLEEFNDVYLVTHLM 107
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 15 TPEFMAPE----MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIY 61
TP +MAPE M E YD VDV++ G+ +E++ + P + +Y
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY 224
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 114 EIGRGSFKTVYRGLDTQTGVAVAWCELQ-EKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
EIG GSF VY D + VA ++ K + L+ L+HPN + +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 173 G 173
G
Sbjct: 82 G 82
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM 52
TP +MAPE+ + Y VD+++ G+ +EM E PY+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+ Y +FE+ IG+G+ TVY +D TG VA+ LQ++ +++
Sbjct: 20 KKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMREN 74
Query: 164 QHPNIVSFYGYWEV 177
++PNIV++ + V
Sbjct: 75 KNPNIVNYLDSYLV 88
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM 52
TP +MAPE+ + Y VD+++ G+ +EM E PY+
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 218
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+ Y +FE+ IG+G+ TVY +D TG VA+ LQ++ +++
Sbjct: 21 KKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMREN 75
Query: 164 QHPNIVSFYGYWEV 177
++PNIV++ + V
Sbjct: 76 KNPNIVNYLDSYLV 89
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 178 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 65 V 65
V
Sbjct: 235 V 235
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 86 FTPARSLEEFNDVYLVTHLM 105
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM 52
TP +MAPE+ + Y VD+++ G+ +EM E PY+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+ Y +FE+ IG+G+ TVY +D TG VA+ LQ++ +++
Sbjct: 20 KKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMREN 74
Query: 164 QHPNIVSFYGYWEV 177
++PNIV++ + V
Sbjct: 75 KNPNIVNYLDSYLV 88
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM 52
TP +MAPE+ + Y VD+++ G+ +EM E PY+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+ Y +FE+ IG+G+ TVY +D TG VA+ LQ++ +++
Sbjct: 20 KKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMREN 74
Query: 164 QHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++PNIV++ + V + +V E + G+L
Sbjct: 75 KNPNIVNYLDSYLVG----DELWVVMEYLAGGSL 104
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 179 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 235
Query: 65 V 65
V
Sbjct: 236 V 236
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 87 FTPARSLEEFNDVYLVTHLM 106
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 179 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 235
Query: 65 V 65
V
Sbjct: 236 V 236
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 87 FTPARSLEEFNDVYLVTHLM 106
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 193 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 249
Query: 65 V 65
V
Sbjct: 250 V 250
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 101 FTPARSLEEFNDVYLVTHLM 120
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 193 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 249
Query: 65 V 65
V
Sbjct: 250 V 250
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 101 FTPARSLEEFNDVYLVTHLM 120
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 178 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 65 V 65
V
Sbjct: 235 V 235
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 86 FTPARSLEEFNDVYLVTHLM 105
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 216 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 272
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++TE MT G L
Sbjct: 273 PNLVQLLG----VCTREPPFYIITEFMTYGNL 300
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 187 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 65 V 65
V
Sbjct: 244 V 244
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 95 FTPARSLEEFNDVYLVTHLM 114
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 187 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 65 V 65
V
Sbjct: 244 V 244
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
IG G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 95 FTPARSLEEFNDVYLVTHLM 114
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 15 TPEFMAPE----MYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIY 61
TP +MAPE M E YD VDV++ G+ +E++ + P + +Y
Sbjct: 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY 263
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 114 EIGRGSFKTVYRGLDTQTGVAVAWCELQ-EKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
EIG GSF VY D + VA ++ K + L+ L+HPN + +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 173 G 173
G
Sbjct: 121 G 121
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 194 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 250
Query: 65 V 65
V
Sbjct: 251 V 251
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 102 FTPARSLEEFNDVYLVTHLM 121
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 187 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 65 V 65
V
Sbjct: 244 V 244
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 95 FTPARSLEEFNDVYLVTHLM 114
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 205 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 261
Query: 65 V 65
V
Sbjct: 262 V 262
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 113 FTPARSLEEFNDVYLVTHLM 132
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 184 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 240
Query: 65 V 65
V
Sbjct: 241 V 241
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 92 FTPARSLEEFNDVYLVTHLM 111
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYM 52
TP +MAPE+ + Y VD+++ G+ +EM E PY+
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 218
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKXXXXXXXXXXXMLKGL 163
+ Y +FE+ IG+G+ TVY +D TG VA+ LQ++ +++
Sbjct: 21 KKYTRFEK-IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMREN 75
Query: 164 QHPNIVSFYGYWEV 177
++PNIV++ + V
Sbjct: 76 KNPNIVNYLDSYLV 89
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 194 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 250
Query: 65 V 65
V
Sbjct: 251 V 251
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + + +LK ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 102 FTPARSLEEFNDVYLVTHLM 121
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 194 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 250
Query: 65 V 65
V
Sbjct: 251 V 251
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 102 FTPARSLEEFNDVYLVTHLM 121
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + ++ VA L + ++ K ++ L HPNI+ Y
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 174 YWEVTLTKRKYIVLVTELMTSGTL 197
Y+ R+ I L+ E G L
Sbjct: 91 YF----YDRRRIYLILEYAPRGEL 110
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 184 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 240
Query: 65 V 65
V
Sbjct: 241 V 241
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 92 FTPARSLEEFNDVYLVTHLM 111
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 188 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 65 V 65
V
Sbjct: 245 V 245
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 96 FTPARSLEEFNDVYLVTHLM 115
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 184 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 240
Query: 65 V 65
V
Sbjct: 241 V 241
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 92 FTPARSLEEFNDVYLVTHLM 111
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 201 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 257
Query: 65 V 65
V
Sbjct: 258 V 258
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 109 FTPARSLEEFNDVYLVTHLM 128
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 187 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 65 V 65
V
Sbjct: 244 V 244
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 95 FTPARSLEEFNDVYLVTHLM 114
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 202 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 258
Query: 65 V 65
V
Sbjct: 259 V 259
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 110 FTPARSLEEFNDVYLVTHLM 129
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 181 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 237
Query: 65 V 65
V
Sbjct: 238 V 238
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 89 FTPARSLEEFNDVYLVTHLM 108
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 178 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 65 V 65
V
Sbjct: 235 V 235
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 86 FTPARSLEEFNDVYLVTHLM 105
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 189 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245
Query: 65 V 65
V
Sbjct: 246 V 246
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 97 FTPARSLEEFNDVYLVTHLM 116
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 205 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 261
Query: 65 V 65
V
Sbjct: 262 V 262
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 113 FTPARSLEEFNDVYLVTHLM 132
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 189 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245
Query: 65 V 65
V
Sbjct: 246 V 246
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 97 FTPARSLEEFNDVYLVTHLM 116
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 201 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 257
Query: 65 V 65
V
Sbjct: 258 V 258
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 109 FTPARSLEEFNDVYLVTHLM 128
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 188 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 65 V 65
V
Sbjct: 245 V 245
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 96 FTPARSLEEFNDVYLVTHLM 115
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + Q +A L + +L K ++ L+HPNI+ YG
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 174 YWEVTLTKRKYIVL 187
Y+ R Y++L
Sbjct: 73 YFHD--ATRVYLIL 84
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E + YK++ V T
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 189 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245
Query: 65 V 65
V
Sbjct: 246 V 246
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 97 FTPARSLEEFNDVYLVTHLM 116
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
L EE IG G F VYR VAV + + L+HPNI
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTLK 198
++ G K + LV E G L
Sbjct: 69 IALRG----VCLKEPNLCLVMEFARGGPLN 94
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 18 FMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIY 61
+MAPE+ + + DV+++G+ + E+ T E P+ G A Y
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 15 TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPYME 53
TP +MAPE+ +E Y+ D+++ G+ +EM+ + PY +
Sbjct: 188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 184 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 240
Query: 65 V 65
V
Sbjct: 241 V 241
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 92 FTPARSLEEFNDVYLVTHLM 111
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 189 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245
Query: 65 V 65
V
Sbjct: 246 V 246
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 97 FTPARSLEEFNDVYLVTHLM 116
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 192 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 248
Query: 65 V 65
V
Sbjct: 249 V 249
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 100 FTPARSLEEFNDVYLVTHLM 119
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 202 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 258
Query: 65 V 65
V
Sbjct: 259 V 259
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 110 FTPARSLEEFNDVYLVTHLM 129
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
IG GS+ + G + W EL + + +L+ L+HPNIV +Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
IG GS+ + G + W EL + + +L+ L+HPNIV +Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 188 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 65 V 65
V
Sbjct: 245 V 245
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 96 FTPARSLEEFNDVYLVTHLM 115
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
IG GS+ + G + W EL + + +L+ L+HPNIV +Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 88 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 119
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 84
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 85 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 116
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
YV R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 188 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 65 V 65
V
Sbjct: 245 V 245
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 96 FTPARSLEEFNDVYLVTHLM 115
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 89 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 120
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 90 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 121
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 37 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 94
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 95 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 126
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 51 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 108
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 109 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 140
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 24 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 81
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 82 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 113
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 90 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 121
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 86
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 87 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 118
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 90 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 121
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXX----XXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 50 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 107
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 108 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 139
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 88 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 119
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 15 TPEFMAPE-MYEEHYDESVDVYAFGMCMLEM 44
TPE++APE ++++ YD +VD + G + EM
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 91 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 122
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 90 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 121
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXX----XXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 89 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 120
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXX----XXXXXXXXXMLKGLQ 164
+ F E IGRG F VY G C + K LN+ ++K
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPN++S G + L ++V M G L+
Sbjct: 91 HPNVLSLLG---ICLRSEGSPLVVLPYMKHGDLRN 122
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L T
Sbjct: 80 FDHPNIIHLEG----VVTKSKPVMIVTEYMENGSLDT 112
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
M Y+K ++ +G G++ TVY+G T VA E++ + + +LK L+
Sbjct: 1 METYIKLDK-LGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLK 58
Query: 165 HPNIVSFY 172
H NIV+ +
Sbjct: 59 HANIVTLH 66
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEE-HYDESVDVYAFGMCMLEMSTSEYPY 51
TP +MAPE+ Y VD+++ G+ ++EM E PY
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 18 FMAPEMY----EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + Y DVYAFG+ + E+ T + PY QI
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG-LQHPNIVSFYG 173
+G+G F VY + + +A L + +L K ++ L+HPNI+ YG
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 174 YWEVTLTKRKYIVL 187
Y+ + R Y++L
Sbjct: 76 YFHD--STRVYLIL 87
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSIT 70
T +++ PEM E +DE VD+++ G+ E + P+ E YK++ V T
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQDTYKRISRVEFT 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G+G+ V+RG +TG A + +LK L H NIV +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE-VLKKLNHKNIVKLFAI 75
Query: 175 WEVTLTKRKYIVLVTELMTSGTLKT 199
E T T+ K VL+ E G+L T
Sbjct: 76 EEETTTRHK--VLIMEFCPCGSLYT 98
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 14/80 (17%)
Query: 15 TPEFMAPEMYE------EH---YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
T E++ P+MYE +H Y +VD+++ G+ +T P+ GP + K V
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEV 235
Query: 66 SVSITSAGPKVVFQPISGVK 85
I + P ISGV+
Sbjct: 236 MYKIITGKPS---GAISGVQ 252
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYP 50
TP +MAPE+ ++ YD D+++ G+ +E++ E P
Sbjct: 179 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVA 136
+ IG+GSF VY+G+D T VA
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVA 48
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYPY 51
TP+++APE+ + Y +SVD +A+G+ + EM + P+
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL---QHPNIVS 170
EIG G++ TVY+ D +G VA ++ + +L+ L +HPN+V
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
+ T R+ V + L+T
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRT 99
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 73
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++ E MT G L
Sbjct: 74 PNLVQLLG----VCTREPPFYIIIEFMTYGNL 101
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEM 44
YV R R PE M M HY+++VD+++ G M E+
Sbjct: 188 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAEL 222
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 13 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 69
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++ E MT G L
Sbjct: 70 PNLVQLLG----VCTREPPFYIIIEFMTYGNL 97
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEM 44
YV R R PE M M HY+++VD+++ G M E+
Sbjct: 188 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAEL 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEM 44
YV R R PE M M HY+++VD+++ G M E+
Sbjct: 180 YVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAEL 214
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
+V R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 178 FVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 65 V 65
V
Sbjct: 235 V 235
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 86 FTPARSLEEFNDVYLVTHLM 105
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL---QHPNIVS 170
EIG G++ TVY+ D +G VA ++ + +L+ L +HPN+V
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
+ T R+ V + L+T
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRT 99
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 68
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++ E MT G L
Sbjct: 69 PNLVQLLG----VCTREPPFYIIIEFMTYGNL 96
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 5 KSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYP 50
S+V R+ +MAPE + HY D+++ G+ ++E++ YP
Sbjct: 171 NSFVGTRS-----YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGL---QHPNIVS 170
EIG G++ TVY+ D +G VA ++ + +L+ L +HPN+V
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
+ T R+ V + L+T
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRT 99
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G+G+ V+RG +TG A + +LK L H NIV +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE-VLKKLNHKNIVKLFAI 75
Query: 175 WEVTLTKRKYIVLVTELMTSGTLKT 199
E T T+ K VL+ E G+L T
Sbjct: 76 EEETTTRHK--VLIMEFCPCGSLYT 98
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 14/80 (17%)
Query: 15 TPEFMAPEMYE------EH---YDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
T E++ P+MYE +H Y +VD+++ G+ +T P+ GP + K V
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEV 235
Query: 66 SVSITSAGPKVVFQPISGVK 85
I + P ISGV+
Sbjct: 236 MYKIITGKPS---GAISGVQ 252
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
M+ Y K E+ IG G++ TV++ + +T VA ++ ++ +LK L+
Sbjct: 1 MQKYEKLEK-IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK 59
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTEL 191
H NIV + L K + LV E
Sbjct: 60 HKNIVRLHD----VLHSDKKLTLVFEF 82
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMST 46
YV R R PE + M HY+++VD+++ G M EM T
Sbjct: 183 YVVTRWYRAPEVILSWM---HYNQTVDIWSVGCIMAEMLT 219
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E+IG G++ VY+ G A +++ +K ++ +LK L+H NIV Y
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 173 GYWEVTLTKRKYIVLVTEL 191
+V TK++ +++ L
Sbjct: 67 ---DVIHTKKRLVLVFEHL 82
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E+IG G++ VY+ G A +++ +K ++ +LK L+H NIV Y
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 173 GYWEVTLTKRKYIVLVTEL 191
+V TK++ +++ L
Sbjct: 67 ---DVIHTKKRLVLVFEHL 82
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 5 KSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYP 50
S+V R+ +PE + HY D+++ G+ ++EM+ YP
Sbjct: 161 NSFVGTRSYMSPE----RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 5 KSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYP 50
S+V R+ +M+PE + HY D+++ G+ ++EM+ YP
Sbjct: 223 NSFVGTRS-----YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 10 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 66
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++ E MT G L
Sbjct: 67 PNLVQLLG----VCTREPPFYIIIEFMTYGNL 94
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
+V R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 FVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 5 KSYVNIRTQRTPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYP 50
S+V R+ +M+PE + HY D+++ G+ ++EM+ YP
Sbjct: 188 NSFVGTRS-----YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
E+IG G++ VY+ G A +++ +K ++ +LK L+H NIV Y
Sbjct: 8 EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 173 GYWEVTLTKRKYIVLVTEL 191
+V TK++ +++ L
Sbjct: 67 ---DVIHTKKRLVLVFEHL 82
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 5 KSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYP 50
S+V R+ +PE + HY D+++ G+ ++EM+ YP
Sbjct: 161 NSFVGTRSYMSPE----RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 17 EFMAPEMY---EEHYDESVDVYAFGMCMLEMSTSEYPYME 53
++MAPE EE Y E D Y+F M + + T E P+ E
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 109 LKFEEEIGRGSFKTVYRG--LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXX---MLKGL 163
+++E++IG+G F V++G + ++ VA+ L + + ++ L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 164 QHPNIVSFYG 173
HPNIV YG
Sbjct: 81 NHPNIVKLYG 90
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE 48
YV R R PE + M HY+++VD+++ G M EM T +
Sbjct: 201 YVVTRWYRAPEVILSWM---HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKV 64
+V R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++
Sbjct: 182 FVATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 65 V 65
V
Sbjct: 239 V 239
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
M+ Y K E+ IG G++ TV++ + +T VA ++ ++ +LK L+
Sbjct: 1 MQKYEKLEK-IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK 59
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTEL 191
H NIV + L K + LV E
Sbjct: 60 HKNIVRLHD----VLHSDKKLTLVFEF 82
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 17 EFMAPEMY---EEHYDESVDVYAFGMCMLEMSTSEYPYME 53
++MAPE EE Y E D Y+F M + + T E P+ E
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 109 LKFEEEIGRGSFKTVYRG--LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXX---MLKGL 163
+++E++IG+G F V++G + ++ VA+ L + + ++ L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 164 QHPNIVSFYG 173
HPNIV YG
Sbjct: 81 NHPNIVKLYG 90
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 68
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G T+ ++ E MT G L
Sbjct: 69 PNLVQLLG----VCTREPPFYIIIEFMTYGNL 96
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 5 KSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYP 50
S+V R+ +PE + HY D+++ G+ ++EM+ YP
Sbjct: 161 NSFVGTRSYMSPE----RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 17 EFMAPEMY---EEHYDESVDVYAFGMCMLEMSTSEYPYME 53
++MAPE EE Y E D Y+F M + + T E P+ E
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 109 LKFEEEIGRGSFKTVYRG--LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXX---MLKGL 163
+++E++IG+G F V++G + ++ VA+ L + + ++ L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 164 QHPNIVSFYG 173
HPNIV YG
Sbjct: 81 NHPNIVKLYG 90
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 5 KSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYP 50
S+V R+ +PE + HY D+++ G+ ++EM+ YP
Sbjct: 161 NSFVGTRSYMSPE----RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 5 KSYVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYP 50
S+V R+ +PE + HY D+++ G+ ++EM+ YP
Sbjct: 161 NSFVGTRSYMSPE----RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 15 TPEFMAPEMYE-EHYDESVDVYAFGMCMLEMSTSEYP 50
T +M+PE + HY D+++ G+ ++EM+ YP
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 114 EIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSF 171
++G G++ VY+ +DT T VA ++ + + +LK LQH NI+
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 15 TPEFMAPEMYEEH-YDESVDVYAFGMCMLEMSTSEYPY 51
TP+++APE+ +E Y +VD +A G+ + EM P+
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
+K E+ IG G F V G G + VA L+ +K M + H
Sbjct: 31 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ-FDH 89
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
PNI+ G +TK K ++++TE M +G+L
Sbjct: 90 PNIIHLEG----VVTKCKPVMIITEYMENGSLDA 119
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
+K E+ IG G F V G G + VA L+ +K M + H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ-FDH 68
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
PNI+ G +TK K ++++TE M +G+L
Sbjct: 69 PNIIHLEG----VVTKCKPVMIITEYMENGSLDA 98
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 108 YLKFEEEIGRGSFKTVYRGLDTQTG-VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
Y EE+G G+F V+R ++ TG V VA L+K ++ L HP
Sbjct: 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK---YTVKNEISIMNQLHHP 108
Query: 167 NIVSFYGYWEVTLTKRKY-IVLVTELMTSGTL 197
+++ + +E KY +VL+ E ++ G L
Sbjct: 109 KLINLHDAFE-----DKYEMVLILEFLSGGEL 135
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEXMENGSLDS 135
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 74 FDHPNIIRLEG----VVTKSKPVMIVTEXMENGSLDS 106
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG---VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
+K E+ IG G F V G G + VA L+ +K M + H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ-FDH 74
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
PNI+ G +TK K ++++TE M +G+L
Sbjct: 75 PNIIHLEG----VVTKCKPVMIITEYMENGSLDA 104
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 30.0 bits (66), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEXMENGSLDS 135
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 109 LKFEEEIGRGSFKTVYRG---LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
+K E+ IG G F V G L + + VA L+ K M + H
Sbjct: 35 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-FDH 93
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
PN++ G +TK ++++TE M +G+L +
Sbjct: 94 PNVIHLEG----VVTKSTPVMIITEFMENGSLDS 123
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKX--XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A + + ++ + ++ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E R +VL+ EL++ G L
Sbjct: 78 ITLHDVYE----NRTDVVLILELVSGGEL 102
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKX--XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A + + ++ + ++ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E R +VL+ EL++ G L
Sbjct: 78 ITLHDVYE----NRTDVVLILELVSGGEL 102
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.0 bits (66), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCE-LQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
+ E G+G+F TV G + TG++VA + +Q+ + L L HPN
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD----LAVLHHPN 80
Query: 168 IVSFYGYW 175
IV Y+
Sbjct: 81 IVQLQSYF 88
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 74 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 106
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 135
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 91 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 123
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 135
>pdb|1BCR|B Chain B, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii,
With The Microbial Peptide Aldehyde Inhibitor, Antipain,
And Arginine At Room Temperature
pdb|1BCS|B Chain B, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii,
With The Microbial Peptide Aldehyde Inhibitor,
Chymostatin, And Arginine At 100 Degrees Kelvin
Length = 160
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 35 YAFGMCMLEMSTSEYPY---MECIGPAQIYKKVVSVSITSAGPKV 76
Y+ G L +TS YP+ E G +Q+YK + VS+ AG +V
Sbjct: 87 YSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEV 131
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG+ VA +L + +LK ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 90 FTPARSLEEFNDVYLVTHLM 109
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 8 VNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKVV 65
V R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++V
Sbjct: 183 VATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 103 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 135
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +TK K +++VTE M +G+L +
Sbjct: 101 FDHPNIIRLEG----VVTKSKPVMIVTEYMENGSLDS 133
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKX--XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A + + ++ + ++ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E R +VL+ EL++ G L
Sbjct: 78 ITLHDVYE----NRTDVVLILELVSGGEL 102
>pdb|1WHT|B Chain B, Structure Of The Complex Of L-Benzylsuccinate With Wheat
Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution
Length = 153
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 35 YAFGMCMLEMSTSEYPY---MECIGPAQIYKKVVSVSITSAGPKV 76
Y+ G L +TS YP+ E G +Q+YK + VS+ AG +V
Sbjct: 85 YSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEV 129
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
+ + + E E+GRG+ VYR T A ++ +K ++K +L L
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYA-LKVLKKTVDK---KIVRTEIGVLLRLS 106
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
HPNI+ +E I LV EL+T G L
Sbjct: 107 HPNIIKLKEIFETPTE----ISLVLELVTGGEL 135
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 109 LKFEEEIGRGSFKTVYRG---LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
+K E+ IG G F V G L + + VA L+ K M + H
Sbjct: 9 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-FDH 67
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
PN++ G +TK ++++TE M +G+L +
Sbjct: 68 PNVIHLEG----VVTKSTPVMIITEFMENGSLDS 97
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKX--XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A + + ++ + ++ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E R +VL+ EL++ G L
Sbjct: 78 ITLHDVYE----NRTDVVLILELVSGGEL 102
>pdb|3SC2|B Chain B, Refined Atomic Model Of Wheat Serine Carboxypeptidase Ii
At 2.2- Angstroms Resolution
Length = 152
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 35 YAFGMCMLEMSTSEYPY---MECIGPAQIYKKVVSVSITSAGPKV 76
Y+ G L +TS YP+ E G +Q+YK + VS+ AG +V
Sbjct: 85 YSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEV 129
>pdb|1WHS|B Chain B, Structure Of The Complex Of L-Benzylsuccinate With Wheat
Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution
Length = 153
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 35 YAFGMCMLEMSTSEYPY---MECIGPAQIYKKVVSVSITSAGPKV 76
Y+ G L +TS YP+ E G +Q+YK + VS+ AG +V
Sbjct: 85 YSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEV 129
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 7 YVNIRTQRTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
Y N R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 213 YKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 113 EEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKX--XXXXXXXXXXMLKGLQHPNI 168
EE+G G F V + + TG+ A + + ++ + ++ +L+ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
++ + +E R +VL+ EL++ G L
Sbjct: 78 ITLHDVYE----NRTDVVLILELVSGGEL 102
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 113 EEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFY 172
+++G G++ V D T V A +++ ++ +LK L HPNI+ Y
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 173 GYWEVTLTKRKYIVLVTELMTSGTL 197
++E KR Y LV E G L
Sbjct: 103 DFFE---DKRNY-YLVMECYKGGEL 123
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 15 TPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSITSAGP 74
T ++APE+ + YDE DV++ G+ + + + YP +I +KV T P
Sbjct: 201 TAYYIAPEVLRKKYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKVEKGKYTFDSP 259
Query: 75 K 75
+
Sbjct: 260 E 260
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGV--AVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
+KF++ IG G+F V + + G+ A ++E + K HP
Sbjct: 17 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 76
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
NI++ G E R Y+ L E G L
Sbjct: 77 NIINLLGACE----HRGYLYLAIEYAPHGNL 103
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 8 VNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMSTSE--YPYMECIGPAQIYKKVV 65
V R R PE M M HY+++VD+++ G M E+ T +P + I ++ ++V
Sbjct: 203 VATRWYRAPEIMLNWM---HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G G++ +V DT+TG VA +L + +LK ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 175 W--EVTLTKRKYIVLVTELM 192
+ +L + + LVT LM
Sbjct: 110 FTPARSLEEFNDVYLVTHLM 129
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 7 YVNIRTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMST 46
YV R R PE M M HY+ +VD+++ G M E+ T
Sbjct: 211 YVATRWYRAPEIMLNWM---HYNMTVDIWSVGCIMAELLT 247
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAV--AWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
+KF++ IG G+F V + + G+ + A ++E + K HP
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
NI++ G E R Y+ L E G L
Sbjct: 87 NIINLLGACE----HRGYLYLAIEYAPHGNL 113
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAV--AWCELQEKKLNKXXXXXXXXXXXMLKGLQHP 166
+KF++ IG G+F V + + G+ + A ++E + K HP
Sbjct: 24 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 83
Query: 167 NIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
NI++ G E R Y+ L E G L
Sbjct: 84 NIINLLGACE----HRGYLYLAIEYAPHGNL 110
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
LK + +G G+F TVY+G+ G + VA L E K M +
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM-ASMD 75
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
HP++V G V L+ I LVT+LM G L
Sbjct: 76 HPHLVRLLG---VCLSPT--IQLVTQLMPHGCL 103
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
LK + +G G+F TVY+G+ G + VA L E K M +
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM-ASMD 98
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
HP++V G V L+ I LVT+LM G L
Sbjct: 99 HPHLVRLLG---VCLS--PTIQLVTQLMPHGCL 126
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
L F +EIG G F V+ G VA ++E +++ M+K L HP +
Sbjct: 10 LTFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSE--EDFIEEAEVMMK-LSHPKL 65
Query: 169 VSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
V YG ++ I LVTE M G L
Sbjct: 66 VQLYG----VCLEQAPICLVTEFMEHGCL 90
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 11 RTQRTPEFMAPE-MYEEHYDESVDVYAFGMCMLEM 44
R++ T +M+PE + + Y + VD+YA G+ + E+
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G GS+ V + + TG VA + E +K +LK L+H N+V+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL-- 90
Query: 175 WEVTLTKRKY 184
EV K+++
Sbjct: 91 -EVCKKKKRW 99
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 15 TPEFMAPEMY--EEHYD-ESVDVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVVSVSI 69
T EFM PE + E Y+ VD+++ G+C+ M + P+ I +++ + + +I
Sbjct: 213 TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI 270
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 18 FMAPEMY--EEHYDESVDVYAFGMCMLEMSTSEYPYMEC 54
+ APE+ HY +++D++A G E+ TSE P C
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHC 238
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 11 RTQRTPEFMAPE-MYEEHYDESVDVYAFGMCMLEM 44
R++ T +M+PE + + Y + VD+YA G+ + E+
Sbjct: 194 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 109 LKFEEEIGRGSFKTVYRG-----LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG- 162
++F EE+G F VY+G + AVA L++K + ML+
Sbjct: 11 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRAR 68
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
LQHPN+V G +TK + + ++ + G L
Sbjct: 69 LQHPNVVCLLG----VVTKDQPLSMIFSYCSHGDL 99
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +T+ + ++VTE M +G+L T
Sbjct: 107 FDHPNIIRLEG----VVTRGRLAMIVTEYMENGSLDT 139
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 109 LKFEEEIGRGSFKTVYRG-----LDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKG- 162
++F EE+G F VY+G + AVA L++K + ML+
Sbjct: 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRAR 85
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
LQHPN+V G +TK + + ++ + G L
Sbjct: 86 LQHPNVVCLLG----VVTKDQPLSMIFSYCSHGDL 116
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 18 FMAPEMYEEHYDE----SVDVYAFGMCMLEMSTSEYPYMECIGPAQI 60
+MAPE+ + DVY++G+ + E+ T E PY QI
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTLKT 199
HPNI+ G +T+ + ++VTE M +G+L T
Sbjct: 107 FDHPNIIRLEG----VVTRGRLAMIVTEYMENGSLDT 139
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM-ASVDNPHVCR 115
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 116 LLG---ICLT--STVQLITQLMPFGCL 137
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
+LK L HPNI+ Y ++E KR Y LV E+ G L
Sbjct: 57 VLKQLDHPNIMKLYEFFE---DKRNY-YLVMEVYRGGEL 91
Score = 26.6 bits (57), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 15 TPEFMAPEMYEEHYDESVDVYAFGMCM 41
T ++APE+ + YDE DV++ G+ +
Sbjct: 169 TAYYIAPEVLRKKYDEKCDVWSCGVIL 195
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G+GSF V + D T A + + +LK L HPNI+ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 175 WEVTLTKRKYIVLVTELMTSGTL 197
E + + +V EL T G L
Sbjct: 90 LEDSSS----FYIVGELYTGGEL 108
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G+GSF V + D T A + + +LK L HPNI+ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 175 WEVTLTKRKYIVLVTELMTSGTL 197
E + + +V EL T G L
Sbjct: 90 LEDSSS----FYIVGELYTGGEL 108
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 115 IGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVSFYGY 174
+G+GSF V + D T A + + +LK L HPNI+ +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 175 WEVTLTKRKYIVLVTELMTSGTL 197
E + + +V EL T G L
Sbjct: 90 LEDSSS----FYIVGELYTGGEL 108
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 109 LKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNI 168
LK E IGRG + VY+G + VAV ++ + ++H NI
Sbjct: 15 LKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQ-----NFINEKNIYRVPLMEHDNI 69
Query: 169 VSFY-GYWEVTLTKRKYIVLVTELMTSGTL 197
F G VT R +LV E +G+L
Sbjct: 70 ARFIVGDERVTADGRMEYLLVMEYYPNGSL 99
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 159 MLKGLQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
+LK L HPNI+ Y ++E KR Y LV E+ G L
Sbjct: 74 VLKQLDHPNIMKLYEFFE---DKRNY-YLVMEVYRGGEL 108
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 15 TPEFMAPEMYEEHYDESVDVYAFGMCM 41
T ++APE+ + YDE DV++ G+ +
Sbjct: 186 TAYYIAPEVLRKKYDEKCDVWSCGVIL 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 106 RGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQH 165
R + + ++G G + VY G+ + + VA L+E + ++K ++H
Sbjct: 31 RTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH 87
Query: 166 PNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
PN+V G TL YI VTE M G L
Sbjct: 88 PNLVQLLGV--CTLEPPFYI--VTEYMPYGNL 115
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 115 IGRGSFKTVYRGLDTQTG--VAVAWCELQEKKLNKX-XXXXXXXXXXMLKGLQHPNIVSF 171
+G G F TVY+ D T VA+ +L + K +L+ L HPNI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 91
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 92 LLG---ICLTST--VQLITQLMPFGCL 113
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 84
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 85 LLG---ICLTST--VQLITQLMPFGCL 106
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 81
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 82 LLG---ICLTST--VQLITQLMPFGXL 103
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 87
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 88 LLG---ICLTST--VQLITQLMPFGCL 109
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 81
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 82 LLG---ICLTST--VQLITQLMPFGCL 103
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 81
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 82 LLG---ICLTST--VQLITQLMPFGCL 103
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 106
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 107 LLG---ICLTST--VQLITQLMPFGCL 128
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 83
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 84 LLG---ICLTST--VQLITQLMPFGCL 105
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 78
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 79 LLG---ICLTST--VQLITQLMPFGCL 100
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 75
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 76 LLG---ICLTST--VQLITQLMPFGCL 97
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 83
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 84 LLG---ICLTST--VQLITQLMPFGCL 105
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 84
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 85 LLG---ICLTST--VQLITQLMPFGCL 106
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 11 RTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMST 46
R T +MAPE D+Y+FG+ +LE+ T
Sbjct: 188 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 84
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 85 LLG---ICLTST--VQLITQLMPFGCL 106
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 88
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 89 LLG---ICLTST--VQLITQLMPFGCL 110
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 11 RTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMST 46
R T +MAPE D+Y+FG+ +LE+ T
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 11 RTQRTPEFMAPEMYEEHYDESVDVYAFGMCMLEMST 46
R T +MAPE D+Y+FG+ +LE+ T
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 88
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 89 LLG---ICLTST--VQLITQLMPFGCL 110
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 115 IGRGSFKTVYRGLDTQTG----VAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPNIVS 170
+G G+F TVY+GL G + VA EL+E K M + +P++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCR 81
Query: 171 FYGYWEVTLTKRKYIVLVTELMTSGTL 197
G + LT + L+T+LM G L
Sbjct: 82 LLG---ICLTST--VQLITQLMPFGCL 103
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 109 LKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
L F +E+G G F V +RG Q VA+ ++E +++ ++ L
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRG---QYDVAIKM--IKEGSMSEDEFIEEAK---VMMNLS 57
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
H +V YG TK++ I ++TE M +G L
Sbjct: 58 HEKLVQLYG----VCTKQRPIFIITEYMANGCL 86
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 17 EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 270 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 307
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCM 41
TP ++APE+ E YD+S D+++ G+ M
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 15 TPEFMAPE-MYEEHYDESV-DVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
TP ++APE + ++ YD V DV++ G+ + M YP+ + P K +
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 109 LKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
L F +E+G G F V +RG Q VA+ ++E +++ ++ L
Sbjct: 11 LTFLKELGTGQFGVVKYGKWRG---QYDVAIK--MIKEGSMSEDEFIEEAK---VMMNLS 62
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
H +V YG TK++ I ++TE M +G L
Sbjct: 63 HEKLVQLYG----VCTKQRPIFIITEYMANGCL 91
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 109 LKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
L F +E+G G F V +RG Q VA+ K ++ L
Sbjct: 10 LTFLKELGTGQFGVVKYGKWRG---QYDVAIKMI-----KEGSMSEDEFIEEAKVMMNLS 61
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
H +V YG TK++ I ++TE M +G L
Sbjct: 62 HEKLVQLYG----VCTKQRPIFIITEYMANGCL 90
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 15 TPEFMAPE-MYEEHYDESV-DVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
TP ++APE + ++ YD V DV++ G+ + M YP+ + P K +
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 15 TPEFMAPE-MYEEHYDESV-DVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
TP ++APE + ++ YD V DV++ G+ + M YP+ + P K +
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 229
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 105 MRGYLKFEEEIGRGSFKTVYRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
M Y++ ++ IG GSF T+ G E+ +++ +L ++
Sbjct: 23 MEKYVRLQK-IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 165 HPNIVSFYGYWE 176
HPNIV + +E
Sbjct: 82 HPNIVQYRESFE 93
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 109 LKFEEEIGRGSFKTV-YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
L F +E+G G F V Y Q VA+ ++E +++ ++ L H
Sbjct: 26 LTFLKELGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAK---VMMNLSHEK 80
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
+V YG TK++ I ++TE M +G L
Sbjct: 81 LVQLYG----VCTKQRPIFIITEYMANGCL 106
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 109 LKFEEEIGRGSFKTV-YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
L F +E+G G F V Y Q VA+ ++E +++ ++ L H
Sbjct: 17 LTFLKELGTGQFGVVKYGKWRGQYDVAIK--MIKEGSMSEDEFIEEAK---VMMNLSHEK 71
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
+V YG TK++ I ++TE M +G L
Sbjct: 72 LVQLYG----VCTKQRPIFIITEYMANGCL 97
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 109 LKFEEEIGRGSFKTV----YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQ 164
L F +E+G G F V +RG Q VA+ ++E +++ ++ L
Sbjct: 11 LTFLKELGTGQFGVVKYGKWRG---QYDVAIK--MIKEGSMSEDEFIEEAK---VMMNLS 62
Query: 165 HPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
H +V YG TK++ I ++TE M +G L
Sbjct: 63 HEKLVQLYG----VCTKQRPIFIITEYMANGCL 91
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 109 LKFEEEIGRGSFKTV-YRGLDTQTGVAVAWCELQEKKLNKXXXXXXXXXXXMLKGLQHPN 167
L F +E+G G F V Y Q VA+ ++E +++ ++ L H
Sbjct: 26 LTFLKELGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAK---VMMNLSHEK 80
Query: 168 IVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
+V YG TK++ I ++TE M +G L
Sbjct: 81 LVQLYG----VCTKQRPIFIITEYMANGCL 106
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 15 TPEFMAPE-MYEEHYDESV-DVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
TP ++APE + ++ YD V DV++ G+ + M YP+ + P K +
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 15 TPEFMAPE-MYEEHYDESV-DVYAFGMCMLEMSTSEYPYMECIGPAQIYKKV 64
TP ++APE + ++ YD V DV++ G+ + M YP+ + P K +
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 248
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 250
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 253
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 14 RTP-EFMAPE-MYEEHYDESVDVYAFGMCMLEMST---SEYP 50
R P ++MAPE +++ Y DV++FG+ M E+ T S YP
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 163 LQHPNIVSFYGYWEVTLTKRKYIVLVTELMTSGTL 197
L HP +V FYG +K I +VTE +++G L
Sbjct: 60 LSHPKLVKFYG----VCSKEYPIYIVTEYISNGCL 90
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPA 58
TP ++APE+ E YD+S D+++ G+ M + P+ G A
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA 217
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 15 TPEFMAPEMY-EEHYDESVDVYAFGMCMLEMSTSEYPYMECIGPA 58
TP ++APE+ E YD+S D+++ G+ M + P+ G A
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA 236
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 26.6 bits (57), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 15 TPEFMAPE-MYEEHYDESV-DVYAFGMCMLEMSTSEYPYMECIGPAQIYKKVV 65
TP ++APE + + YD + DV++ G+ + M YP+ + P Y+K +
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTI 231
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 11 RTQRTPEFMAPEMYEE----HYDESVDVYAFGMCMLEMSTSEYPYME 53
T TP FMAPE E +++DV+A G+ + + P+M+
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,053,610
Number of Sequences: 62578
Number of extensions: 161386
Number of successful extensions: 1443
Number of sequences better than 100.0: 550
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 451
Number of HSP's that attempted gapping in prelim test: 1025
Number of HSP's gapped (non-prelim): 771
length of query: 199
length of database: 14,973,337
effective HSP length: 94
effective length of query: 105
effective length of database: 9,091,005
effective search space: 954555525
effective search space used: 954555525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)