Your job contains 1 sequence.
>psy3603
MWEKKLAGSHPEKNHGMRAERKEINRKKEAMDVYIKDLHVGIKNVNVTCIVLDISPRVTL
KENREVRTLKVADSTACINLSLWDEPGALLHPGDIVRLTKCYAQIWRNCLTLYSSKSGLI
EKIGEFCMVFNENLDMSIPIPNLPVNAPQSANGNSNPGNMNNSGNNKGNMRPNPIDRDVN
RYSNNPDKGSSSSTQNTWVTWDQLLPVKFQFFSSSSRTLKFSNFECGVYLDMCLRRRTSH
SHWFRLTAEKHSGEIRPGTVRCDC
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3603
(264 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031909 - symbol:CG5181 species:7227 "Drosophila m... 369 5.8e-34 1
UNIPROTKB|Q96AH0 - symbol:NABP1 "SOSS complex subunit B2"... 312 6.4e-28 1
UNIPROTKB|F1NRZ8 - symbol:OBFC2A "Uncharacterized protein... 310 1.0e-27 1
UNIPROTKB|F1P1M0 - symbol:OBFC2A "Uncharacterized protein... 310 1.0e-27 1
UNIPROTKB|A5D7P8 - symbol:NABP1 "SOSS complex subunit B2"... 309 1.3e-27 1
UNIPROTKB|F1SN32 - symbol:NABP1 "Uncharacterized protein"... 309 1.3e-27 1
ZFIN|ZDB-GENE-041212-71 - symbol:nabp1a "nucleic acid bin... 306 2.8e-27 1
UNIPROTKB|C9JMP5 - symbol:NABP2 "SOSS complex subunit B1"... 303 5.7e-27 1
UNIPROTKB|C9JT95 - symbol:NABP2 "SOSS complex subunit B1"... 303 5.7e-27 1
UNIPROTKB|Q9BQ15 - symbol:NABP2 "SOSS complex subunit B1"... 303 5.7e-27 1
MGI|MGI:1923258 - symbol:Nabp1 "nucleic acid binding prot... 302 7.3e-27 1
RGD|1306658 - symbol:Nabp1 "nucleic acid binding protein ... 302 7.3e-27 1
UNIPROTKB|Q6NRF9 - symbol:nabp2-b "SOSS complex subunit B... 301 9.4e-27 1
UNIPROTKB|A6QLK2 - symbol:NABP2 "SOSS complex subunit B1"... 299 1.5e-26 1
UNIPROTKB|E2R046 - symbol:NABP2 "Uncharacterized protein"... 299 1.5e-26 1
UNIPROTKB|J9P213 - symbol:NABP2 "Uncharacterized protein"... 299 1.5e-26 1
UNIPROTKB|F1SLZ8 - symbol:NABP2 "Uncharacterized protein"... 299 1.5e-26 1
MGI|MGI:1917167 - symbol:Nabp2 "nucleic acid binding prot... 299 1.5e-26 1
RGD|1308158 - symbol:Nabp2 "nucleic acid binding protein ... 299 1.5e-26 1
UNIPROTKB|Q6DE02 - symbol:nabp2-a "SOSS complex subunit B... 292 8.4e-26 1
UNIPROTKB|Q66K94 - symbol:nabp2 "SOSS complex subunit B1"... 290 1.4e-25 1
ZFIN|ZDB-GENE-050913-74 - symbol:nabp1b "nucleic acid bin... 285 4.6e-25 1
UNIPROTKB|J9NV34 - symbol:NABP2 "Uncharacterized protein"... 256 5.5e-22 1
UNIPROTKB|H7C0W4 - symbol:NABP1 "SOSS complex subunit B2"... 254 9.0e-22 1
DICTYBASE|DDB_G0279223 - symbol:DDB_G0279223 "OB fold-con... 201 3.7e-16 1
WB|WBGene00015554 - symbol:C06G3.8 species:6239 "Caenorha... 165 2.4e-12 1
TAIR|locus:2160614 - symbol:AT5G63690 "AT5G63690" species... 132 1.4e-08 1
>FB|FBgn0031909 [details] [associations]
symbol:CG5181 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR004365
Pfam:PF01336 EMBL:AE014134 GO:GO:0003677 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 eggNOG:NOG285523
GeneTree:ENSGT00390000001913 EMBL:BT010046 RefSeq:NP_609115.1
UniGene:Dm.12196 ProteinModelPortal:Q9VM17 SMR:Q9VM17 PaxDb:Q9VM17
PRIDE:Q9VM17 EnsemblMetazoa:FBtr0079467 GeneID:34018
KEGG:dme:Dmel_CG5181 UCSC:CG5181-RA FlyBase:FBgn0031909
InParanoid:Q9VM17 OMA:FKIGEFC PhylomeDB:Q9VM17 GenomeRNAi:34018
NextBio:786462 Bgee:Q9VM17 Uniprot:Q9VM17
Length = 204
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 68/105 (64%), Positives = 83/105 (79%)
Query: 35 IKDLHVGIKNVNVTCIVLDISPRVTLKENREVRTLKVADSTACINLSLWDEPGALLHPGD 94
IKD+ G+KN+NV IVL++ KENREVR KV D TACIN+S+WDEPG L+ PGD
Sbjct: 9 IKDIKPGLKNINVIFIVLEVGVATVTKENREVRNFKVGDPTACINVSIWDEPGKLIAPGD 68
Query: 95 IVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIP 139
IVRLTK YA IWR+CLTLYS K+G + KIGE+CMVFNE+++MS P
Sbjct: 69 IVRLTKGYASIWRHCLTLYSGKNGEVFKIGEYCMVFNESVNMSEP 113
>UNIPROTKB|Q96AH0 [details] [associations]
symbol:NABP1 "SOSS complex subunit B2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0070876 "SOSS
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0010212
"response to ionizing radiation" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] [GO:0003697
"single-stranded DNA binding" evidence=ISS] InterPro:IPR004365
Pfam:PF01336 GO:GO:0003723 GO:GO:0010212 EMBL:CH471058
GO:GO:0003697 GO:GO:0000724 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0031576 GO:GO:0070876 eggNOG:NOG285523
HOGENOM:HOG000006622 CTD:64859 OMA:VHTGPES EMBL:AK026486
EMBL:AL832659 EMBL:AC114778 EMBL:BC017114 EMBL:BC107723
IPI:IPI00010228 IPI:IPI00059434 IPI:IPI00892743
RefSeq:NP_001026886.1 RefSeq:NP_001241665.1 UniGene:Hs.591610
ProteinModelPortal:Q96AH0 SMR:Q96AH0 STRING:Q96AH0 DMDM:74760705
PRIDE:Q96AH0 DNASU:64859 Ensembl:ENST00000307849
Ensembl:ENST00000409510 Ensembl:ENST00000410026
Ensembl:ENST00000425611 Ensembl:ENST00000451500 GeneID:64859
KEGG:hsa:64859 UCSC:uc002usw.3 UCSC:uc021vug.1
GeneCards:GC02P192543 H-InvDB:HIX0002686 HGNC:HGNC:26232 MIM:612103
neXtProt:NX_Q96AH0 PharmGKB:PA143485566 InParanoid:Q96AH0
PhylomeDB:Q96AH0 GenomeRNAi:64859 NextBio:67011 ArrayExpress:Q96AH0
Bgee:Q96AH0 CleanEx:HS_OBFC2A Genevestigator:Q96AH0 Uniprot:Q96AH0
Length = 204
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 60/120 (50%), Positives = 87/120 (72%)
Query: 24 INRKKEAMDVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSL 82
+NR + + ++I+D+ G+KN+NV IVL+I RVT K+ EVR+ KVAD T I +S+
Sbjct: 1 MNRVNDPL-IFIRDIKPGLKNLNVVFIVLEIG-RVTKTKDGHEVRSCKVADKTGSITISV 58
Query: 83 WDEPGALLHPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPN 142
WDE G L+ PGDI+RLT+ YA +W+ CLTLY+ + G ++KIGEFCMV++E + S P P+
Sbjct: 59 WDEIGGLIQPGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSEVPNFSEPNPD 118
>UNIPROTKB|F1NRZ8 [details] [associations]
symbol:OBFC2A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0070876 "SOSS complex" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0003723 GO:GO:0010212
GO:GO:0000724 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0031576 GO:GO:0070876 GeneTree:ENSGT00390000001913
OMA:VHTGPES EMBL:AADN02019747 EMBL:AADN02019748 EMBL:AADN02019749
EMBL:AADN02019750 EMBL:AADN02019751 IPI:IPI00572467
Ensembl:ENSGALT00000012532 ArrayExpress:F1NRZ8 Uniprot:F1NRZ8
Length = 210
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/108 (55%), Positives = 80/108 (74%)
Query: 33 VYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALLH 91
V+IKD+ G+KN+NV IVL+I RVT K+ EVR+ KVAD T I +S+WDE G+L+
Sbjct: 10 VFIKDIKPGLKNLNVVFIVLEIG-RVTKTKDGHEVRSCKVADKTGSITISVWDEIGSLIQ 68
Query: 92 PGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIP 139
PGDI+RLTK YA +W+ CLTLY+ + G + KIGEFCMV++E + S P
Sbjct: 69 PGDIIRLTKGYASLWKGCLTLYTGRGGELHKIGEFCMVYSEVPNFSEP 116
>UNIPROTKB|F1P1M0 [details] [associations]
symbol:OBFC2A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GeneTree:ENSGT00390000001913
EMBL:AADN02019747 EMBL:AADN02019748 EMBL:AADN02019749
EMBL:AADN02019750 EMBL:AADN02019751 IPI:IPI00683240
Ensembl:ENSGALT00000033569 ArrayExpress:F1P1M0 Uniprot:F1P1M0
Length = 194
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/108 (55%), Positives = 80/108 (74%)
Query: 33 VYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALLH 91
V+IKD+ G+KN+NV IVL+I RVT K+ EVR+ KVAD T I +S+WDE G+L+
Sbjct: 1 VFIKDIKPGLKNLNVVFIVLEIG-RVTKTKDGHEVRSCKVADKTGSITISVWDEIGSLIQ 59
Query: 92 PGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIP 139
PGDI+RLTK YA +W+ CLTLY+ + G + KIGEFCMV++E + S P
Sbjct: 60 PGDIIRLTKGYASLWKGCLTLYTGRGGELHKIGEFCMVYSEVPNFSEP 107
>UNIPROTKB|A5D7P8 [details] [associations]
symbol:NABP1 "SOSS complex subunit B2" species:9913 "Bos
taurus" [GO:0070876 "SOSS complex" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR004365 Pfam:PF01336 GO:GO:0003677
GO:GO:0003723 GO:GO:0010212 GO:GO:0000724 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0031576 GO:GO:0070876
eggNOG:NOG285523 GeneTree:ENSGT00390000001913 HOGENOM:HOG000006622
OrthoDB:EOG4PC9T3 EMBL:BC140638 IPI:IPI00691252
RefSeq:NP_001091593.1 UniGene:Bt.3546 ProteinModelPortal:A5D7P8
Ensembl:ENSBTAT00000024821 GeneID:613474 KEGG:bta:613474 CTD:64859
InParanoid:A5D7P8 OMA:VHTGPES NextBio:20898594 Uniprot:A5D7P8
Length = 206
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 59/111 (53%), Positives = 82/111 (73%)
Query: 33 VYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALLH 91
++IKD+ G+KN+NV IVL+I RVT K+ EVR+ KVAD T I +S+WDE G L+
Sbjct: 9 LFIKDIKPGLKNLNVVFIVLEIG-RVTKTKDGHEVRSCKVADKTGSITISVWDEIGGLIQ 67
Query: 92 PGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPN 142
PGDI+RLT+ YA +W+ CLTLY+ + G ++KIGEFCMV++E + S P P+
Sbjct: 68 PGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSELPNFSEPNPD 118
>UNIPROTKB|F1SN32 [details] [associations]
symbol:NABP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070876 "SOSS complex" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR004365
Pfam:PF01336 GO:GO:0003723 GO:GO:0010212 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0031576
GO:GO:0070876 GeneTree:ENSGT00390000001913 OMA:VHTGPES
EMBL:CU467019 RefSeq:NP_001231420.1 UniGene:Ssc.18304
ProteinModelPortal:F1SN32 Ensembl:ENSSSCT00000017487
GeneID:100155066 KEGG:ssc:100155066 CTD:424046 Uniprot:F1SN32
Length = 204
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 59/111 (53%), Positives = 82/111 (73%)
Query: 33 VYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALLH 91
++IKD+ G+KN+NV IVL+I RVT K+ EVR+ KVAD T I +S+WDE G L+
Sbjct: 9 LFIKDIKPGLKNLNVVFIVLEIG-RVTKTKDGHEVRSCKVADKTGSITISVWDEIGGLIQ 67
Query: 92 PGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPN 142
PGDI+RLT+ YA +W+ CLTLY+ + G ++KIGEFCMV++E + S P P+
Sbjct: 68 PGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSEVPNFSEPNPD 118
>ZFIN|ZDB-GENE-041212-71 [details] [associations]
symbol:nabp1a "nucleic acid binding protein 1a"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA] InterPro:IPR004365 Pfam:PF01336
ZFIN:ZDB-GENE-041212-71 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GeneTree:ENSGT00390000001913
EMBL:CT867952 Ensembl:ENSDART00000007914 Bgee:G1K2E9 Uniprot:G1K2E9
Length = 217
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 63/126 (50%), Positives = 87/126 (69%)
Query: 25 NRKKEAMDVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLW 83
N EA+ + IKD+ G KN+N+ IVL+I RVT K+ EVR+ +VAD + I +S+W
Sbjct: 3 NISNEAV-ILIKDVKPGSKNLNIVFIVLEIG-RVTKTKDGHEVRSCRVADKSGSIAISVW 60
Query: 84 DEPGALLHPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPNL 143
DE G+L+ PGDI+RLT+ YA IW+ CLTLY+ + G ++KIGEFCMV++E + S P P L
Sbjct: 61 DELGSLIQPGDIIRLTRGYASIWKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEL 120
Query: 144 PVNAPQ 149
A Q
Sbjct: 121 LAQANQ 126
>UNIPROTKB|C9JMP5 [details] [associations]
symbol:NABP2 "SOSS complex subunit B1" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AC073896
HOGENOM:HOG000006622 HGNC:HGNC:28412 IPI:IPI00894387
ProteinModelPortal:C9JMP5 SMR:C9JMP5 STRING:C9JMP5
Ensembl:ENST00000399713 ArrayExpress:C9JMP5 Bgee:C9JMP5
Uniprot:C9JMP5
Length = 152
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/122 (49%), Positives = 84/122 (68%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPNLPVN-APQ 149
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P AP
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYSTQQAPN 122
Query: 150 SA 151
A
Sbjct: 123 KA 124
>UNIPROTKB|C9JT95 [details] [associations]
symbol:NABP2 "SOSS complex subunit B1" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AC073896
HOGENOM:HOG000006622 OrthoDB:EOG4PC9T3 HGNC:HGNC:28412
IPI:IPI00894509 ProteinModelPortal:C9JT95 SMR:C9JT95 STRING:C9JT95
Ensembl:ENST00000447747 ArrayExpress:C9JT95 Bgee:C9JT95
Uniprot:C9JT95
Length = 144
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/122 (49%), Positives = 84/122 (68%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPNLPVN-APQ 149
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P AP
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYSTQQAPN 122
Query: 150 SA 151
A
Sbjct: 123 KA 124
>UNIPROTKB|Q9BQ15 [details] [associations]
symbol:NABP2 "SOSS complex subunit B1" species:9606 "Homo
sapiens" [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0000075
"cell cycle checkpoint" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=IMP] [GO:0070876 "SOSS complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004365 Pfam:PF01336 EMBL:CH471054
GO:GO:0010212 GO:GO:0003697 GO:GO:0000724 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0031576 GO:GO:0070876
EMBL:AC073896 CTD:79035 eggNOG:NOG285523 HOGENOM:HOG000006622
OMA:NHTAAGP OrthoDB:EOG4PC9T3 EMBL:AY203942 EMBL:BC001079
EMBL:BC006171 IPI:IPI00031633 IPI:IPI00893801 RefSeq:NP_076973.1
UniGene:Hs.240170 ProteinModelPortal:Q9BQ15 SMR:Q9BQ15
IntAct:Q9BQ15 STRING:Q9BQ15 PhosphoSite:Q9BQ15 DMDM:74761196
PaxDb:Q9BQ15 PRIDE:Q9BQ15 DNASU:79035 Ensembl:ENST00000267023
Ensembl:ENST00000341463 Ensembl:ENST00000380198 GeneID:79035
KEGG:hsa:79035 UCSC:uc001ski.3 GeneCards:GC12P056616
HGNC:HGNC:28412 HPA:HPA044615 MIM:612104 neXtProt:NX_Q9BQ15
PharmGKB:PA143485567 InParanoid:Q9BQ15 PhylomeDB:Q9BQ15
GenomeRNAi:79035 NextBio:67757 ArrayExpress:Q9BQ15 Bgee:Q9BQ15
CleanEx:HS_OBFC2B Genevestigator:Q9BQ15 Uniprot:Q9BQ15
Length = 211
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/122 (49%), Positives = 84/122 (68%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPNLPVN-APQ 149
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P AP
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYSTQQAPN 122
Query: 150 SA 151
A
Sbjct: 123 KA 124
>MGI|MGI:1923258 [details] [associations]
symbol:Nabp1 "nucleic acid binding protein 1" species:10090
"Mus musculus" [GO:0000075 "cell cycle checkpoint" evidence=ISO]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003723 "RNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0010212 "response to ionizing
radiation" evidence=ISO] [GO:0070876 "SOSS complex" evidence=ISO]
InterPro:IPR004365 Pfam:PF01336 MGI:MGI:1923258 GO:GO:0003723
GO:GO:0010212 GO:GO:0003697 GO:GO:0000724 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0031576 GO:GO:0070876
eggNOG:NOG285523 GeneTree:ENSGT00390000001913 HOGENOM:HOG000006622
OrthoDB:EOG4PC9T3 CTD:64859 OMA:VHTGPES EMBL:AY880264 EMBL:AK015312
EMBL:AK028886 EMBL:AK028936 EMBL:AK049396 EMBL:AK083915
EMBL:AK163613 EMBL:AK166300 EMBL:AK167652 EMBL:BC095967
EMBL:BC131923 EMBL:BC132532 IPI:IPI00309733 IPI:IPI00894792
RefSeq:NP_082972.2 UniGene:Mm.196290 ProteinModelPortal:Q8BGW5
SMR:Q8BGW5 STRING:Q8BGW5 PaxDb:Q8BGW5 PRIDE:Q8BGW5
Ensembl:ENSMUST00000027279 GeneID:109019 KEGG:mmu:109019
UCSC:uc007axn.1 UCSC:uc007axo.1 InParanoid:Q8BGW5 NextBio:361576
Bgee:Q8BGW5 Genevestigator:Q8BGW5 Uniprot:Q8BGW5
Length = 198
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 58/111 (52%), Positives = 81/111 (72%)
Query: 33 VYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALLH 91
++IKD+ G+KN+NV IVL+I RVT K+ EVR+ KVAD T I +S+WDE G L+
Sbjct: 9 LFIKDIKAGLKNLNVVFIVLEIG-RVTKTKDGHEVRSCKVADRTGSITISVWDEIGGLIQ 67
Query: 92 PGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPN 142
GDI+RLT+ YA +W+ CLTLY+ + G ++KIGEFCMV++E + S P P+
Sbjct: 68 TGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSEVPNFSEPNPD 118
>RGD|1306658 [details] [associations]
symbol:Nabp1 "nucleic acid binding protein 1" species:10116
"Rattus norvegicus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO;ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO;ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISO;ISS] [GO:0003723 "RNA
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006281 "DNA repair" evidence=ISO;ISS] [GO:0006974 "response to
DNA damage stimulus" evidence=ISO;ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISO;ISS] [GO:0070876 "SOSS complex"
evidence=ISO;ISS] InterPro:IPR004365 Pfam:PF01336 RGD:1306658
GO:GO:0003723 GO:GO:0010212 GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0031576
GO:GO:0070876 eggNOG:NOG285523 GeneTree:ENSGT00390000001913
HOGENOM:HOG000006622 OrthoDB:EOG4PC9T3 CTD:64859 OMA:VHTGPES
EMBL:BC089852 IPI:IPI00208312 RefSeq:NP_001014238.1
UniGene:Rn.21433 ProteinModelPortal:Q5FVP2
Ensembl:ENSRNOT00000021403 GeneID:363227 KEGG:rno:363227
UCSC:RGD:1306658 InParanoid:Q5FVP2 NextBio:682902
Genevestigator:Q5FVP2 Uniprot:Q5FVP2
Length = 198
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 58/111 (52%), Positives = 81/111 (72%)
Query: 33 VYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALLH 91
++IKD+ G+KN+NV IVL+I RVT K+ EVR+ KVAD T I +S+WDE G L+
Sbjct: 9 LFIKDIKAGLKNLNVVFIVLEIG-RVTKTKDGHEVRSCKVADRTGSITISVWDEIGGLIQ 67
Query: 92 PGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPN 142
GDI+RLT+ YA +W+ CLTLY+ + G ++KIGEFCMV++E + S P P+
Sbjct: 68 TGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSEVPNFSEPNPD 118
>UNIPROTKB|Q6NRF9 [details] [associations]
symbol:nabp2-b "SOSS complex subunit B1-B" species:8355
"Xenopus laevis" [GO:0000075 "cell cycle checkpoint" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0010212 GO:GO:0003697
GO:GO:0000724 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0031576 GO:GO:0070876 EMBL:BC070793 RefSeq:NP_001084896.1
UniGene:Xl.24827 ProteinModelPortal:Q6NRF9 GeneID:431947
KEGG:xla:431947 CTD:431947 Xenbase:XB-GENE-6251551 Uniprot:Q6NRF9
Length = 203
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 65/164 (39%), Positives = 92/164 (56%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN++V IVL+ RVT K+ EVRT KVAD T IN+S+WDE G +
Sbjct: 4 ETFVKDVKPGLKNLSVLFIVLETG-RVTKTKDGHEVRTCKVADKTGTINISVWDEVGNFI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPNLPVNAPQS 150
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P Q+
Sbjct: 63 QPGDIIRLTKGYASLFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYTAQQSQN 122
Query: 151 AXXXXXXXXXXXXXXXXXXXXXXPIDRDVNRYSNNPDKGSSSST 194
P D D SN+ ++ ST
Sbjct: 123 KQAQAESGTGTNNHNSSSPAPPAP-DLDNGNGSNSSGPSTNQST 165
>UNIPROTKB|A6QLK2 [details] [associations]
symbol:NABP2 "SOSS complex subunit B1" species:9913 "Bos
taurus" [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0000075 "cell cycle checkpoint" evidence=ISS]
[GO:0070876 "SOSS complex" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=ISS]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0010212 GO:GO:0003697
GO:GO:0000724 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0031576 GO:GO:0070876 CTD:79035 EMBL:BC147994 IPI:IPI00839312
RefSeq:NP_001094621.1 UniGene:Bt.12435 ProteinModelPortal:A6QLK2
Ensembl:ENSBTAT00000044279 GeneID:533842 KEGG:bta:533842
eggNOG:NOG285523 GeneTree:ENSGT00390000001913 HOGENOM:HOG000006622
InParanoid:A6QLK2 OMA:NHTAAGP OrthoDB:EOG4PC9T3 NextBio:20876167
Uniprot:A6QLK2
Length = 211
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/111 (51%), Positives = 81/111 (72%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIP 141
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNP 113
>UNIPROTKB|E2R046 [details] [associations]
symbol:NABP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070876 "SOSS complex" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] InterPro:IPR004365 Pfam:PF01336 GO:GO:0010212
GO:GO:0003697 GO:GO:0000724 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0031576 GO:GO:0070876
GeneTree:ENSGT00390000001913 OMA:NHTAAGP EMBL:AAEX03006923
RefSeq:XP_531632.2 ProteinModelPortal:E2R046
Ensembl:ENSCAFT00000000104 GeneID:474400 KEGG:cfa:474400
CTD:100412029 NextBio:20850423 Uniprot:E2R046
Length = 211
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/111 (51%), Positives = 81/111 (72%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIP 141
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNP 113
>UNIPROTKB|J9P213 [details] [associations]
symbol:NABP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GeneTree:ENSGT00390000001913
EMBL:AAEX03006923 Ensembl:ENSCAFT00000044960 Uniprot:J9P213
Length = 211
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/111 (51%), Positives = 81/111 (72%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIP 141
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNP 113
>UNIPROTKB|F1SLZ8 [details] [associations]
symbol:NABP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070876 "SOSS complex" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] InterPro:IPR004365 Pfam:PF01336 GO:GO:0010212
GO:GO:0003697 GO:GO:0000724 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0031576 GO:GO:0070876
GeneTree:ENSGT00390000001913 OMA:NHTAAGP EMBL:CU694915
Ensembl:ENSSSCT00000000412 Uniprot:F1SLZ8
Length = 213
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/111 (51%), Positives = 81/111 (72%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIP 141
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNP 113
>MGI|MGI:1917167 [details] [associations]
symbol:Nabp2 "nucleic acid binding protein 2" species:10090
"Mus musculus" [GO:0000075 "cell cycle checkpoint" evidence=ISO]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0070876 "SOSS
complex" evidence=ISO] InterPro:IPR004365 Pfam:PF01336
MGI:MGI:1917167 GO:GO:0010212 GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0031576
GO:GO:0070876 CTD:79035 eggNOG:NOG285523
GeneTree:ENSGT00390000001913 HOGENOM:HOG000006622 OrthoDB:EOG4PC9T3
EMBL:DQ158906 EMBL:BC026942 IPI:IPI00153704 RefSeq:NP_081533.1
UniGene:Mm.46614 ProteinModelPortal:Q8R2Y9 SMR:Q8R2Y9 STRING:Q8R2Y9
PhosphoSite:Q8R2Y9 PaxDb:Q8R2Y9 PRIDE:Q8R2Y9
Ensembl:ENSMUST00000026439 Ensembl:ENSMUST00000164199 GeneID:69917
KEGG:mmu:69917 UCSC:uc007hmq.1 InParanoid:Q8R2Y9 ChiTaRS:OBFC2B
NextBio:330605 Bgee:Q8R2Y9 Genevestigator:Q8R2Y9 Uniprot:Q8R2Y9
Length = 212
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/111 (51%), Positives = 81/111 (72%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIP 141
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNP 113
>RGD|1308158 [details] [associations]
symbol:Nabp2 "nucleic acid binding protein 2" species:10116
"Rattus norvegicus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO;ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO;ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=ISO;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO;ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISO;ISS] [GO:0070876 "SOSS complex" evidence=ISO;ISS]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR004365
Pfam:PF01336 RGD:1308158 GO:GO:0010212 GO:GO:0003697 GO:GO:0000724
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0031576
GO:GO:0070876 CTD:79035 eggNOG:NOG285523
GeneTree:ENSGT00390000001913 HOGENOM:HOG000006622 OMA:NHTAAGP
OrthoDB:EOG4PC9T3 EMBL:BC104710 IPI:IPI00365941
RefSeq:NP_001030111.2 RefSeq:NP_001231748.1 UniGene:Rn.23934
ProteinModelPortal:Q3SWT1 STRING:Q3SWT1 Ensembl:ENSRNOT00000031362
GeneID:362813 KEGG:rno:362813 UCSC:RGD:1308158 InParanoid:Q3SWT1
NextBio:681349 Genevestigator:Q3SWT1 Uniprot:Q3SWT1
Length = 211
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/111 (51%), Positives = 81/111 (72%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN+N+ IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G L+
Sbjct: 4 ETFVKDIKPGLKNLNLIFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIP 141
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P
Sbjct: 63 QPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNP 113
>UNIPROTKB|Q6DE02 [details] [associations]
symbol:nabp2-a "SOSS complex subunit B1-A" species:8355
"Xenopus laevis" [GO:0000075 "cell cycle checkpoint" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0070876 "SOSS complex" evidence=ISS]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0010212 GO:GO:0003697
GO:GO:0000724 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0031576 GO:GO:0070876 EMBL:BC077346 RefSeq:NP_001086717.1
UniGene:Xl.41740 ProteinModelPortal:Q6DE02 GeneID:446552
KEGG:xla:446552 CTD:79035 Xenbase:XB-GENE-985194 Uniprot:Q6DE02
Length = 203
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 58/120 (48%), Positives = 82/120 (68%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN++V IVL+ RVT K+ EVRT KVAD T IN+S+WDE G +
Sbjct: 4 ETFVKDVKPGLKNLSVLFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDELGNFI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPNLPVNAPQS 150
PGDI+RL+K YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P QS
Sbjct: 63 QPGDIIRLSKGYASLFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYIAQQSQS 122
>UNIPROTKB|Q66K94 [details] [associations]
symbol:nabp2 "SOSS complex subunit B1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0010212
"response to ionizing radiation" evidence=ISS] [GO:0070876 "SOSS
complex" evidence=ISS] InterPro:IPR004365 Pfam:PF01336
GO:GO:0010212 GO:GO:0003697 GO:GO:0000724 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0031576 GO:GO:0070876
CTD:79035 eggNOG:NOG285523 HOGENOM:HOG000006622 OrthoDB:EOG4PC9T3
EMBL:CR762209 EMBL:BC080502 RefSeq:NP_001007990.1 UniGene:Str.11818
ProteinModelPortal:Q66K94 STRING:Q66K94 GeneID:493352
KEGG:xtr:493352 Xenbase:XB-GENE-985188 InParanoid:Q66K94
Bgee:Q66K94 Uniprot:Q66K94
Length = 203
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 56/111 (50%), Positives = 80/111 (72%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVT-LKENREVRTLKVADSTACINLSLWDEPGALL 90
+ ++KD+ G+KN++V IVL+ RVT K+ EVRT KVAD T IN+S+WD+ G +
Sbjct: 4 ETFVKDVKPGLKNLSVLFIVLETG-RVTKTKDGHEVRTCKVADKTGSINISVWDDLGNFI 62
Query: 91 HPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIP 141
PGDI+RLTK YA +++ CLTLY+ + G ++KIGEFCMV++E + S P P
Sbjct: 63 QPGDIIRLTKGYASLFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNP 113
>ZFIN|ZDB-GENE-050913-74 [details] [associations]
symbol:nabp1b "nucleic acid binding protein 1b"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR004365 Pfam:PF01336 ZFIN:ZDB-GENE-050913-74
GO:GO:0003676 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:NOG285523 HOGENOM:HOG000006622 OrthoDB:EOG4PC9T3
EMBL:BC097147 IPI:IPI00619647 RefSeq:NP_001025423.1
UniGene:Dr.75662 ProteinModelPortal:Q4V8Y5 GeneID:570609
KEGG:dre:570609 CTD:570609 HOVERGEN:HBG096827 InParanoid:Q4V8Y5
NextBio:20890212 Uniprot:Q4V8Y5
Length = 216
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 53/109 (48%), Positives = 76/109 (69%)
Query: 35 IKDLHVGIKNVNVTCIVLDISPRVTLKENREVRTLKVADSTACINLSLWDEPGALLHPGD 94
IKDL G+KN+N+ IVL+ K+ EVR+ KVAD T I +S+WDE G+L+ GD
Sbjct: 12 IKDLKAGLKNINLVFIVLETGRVSKTKDGHEVRSCKVADRTGSITISVWDEVGSLIQTGD 71
Query: 95 IVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPNL 143
I+RLT+ YA +++ CLTLY ++G ++KIGEFCM+F+E + S P P +
Sbjct: 72 IIRLTRGYASLFKGCLTLYIGRTGDLQKIGEFCMIFSETPNFSEPNPEV 120
>UNIPROTKB|J9NV34 [details] [associations]
symbol:NABP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GeneTree:ENSGT00390000001913
EMBL:AAEX03006923 Ensembl:ENSCAFT00000044811 Uniprot:J9NV34
Length = 201
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 50/93 (53%), Positives = 68/93 (73%)
Query: 52 LDISP--RVT-LKENREVRTLKVADSTACINLSLWDEPGALLHPGDIVRLTKCYAQIWRN 108
+D+ P RVT K+ EVRT KVAD T IN+S+WD+ G L+ PGDI+RLTK YA +++
Sbjct: 11 VDLFPSGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPGDIIRLTKGYASVFKG 70
Query: 109 CLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIP 141
CLTLY+ + G ++KIGEFCMV++E + S P P
Sbjct: 71 CLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNP 103
>UNIPROTKB|H7C0W4 [details] [associations]
symbol:NABP1 "SOSS complex subunit B2" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR004365 Pfam:PF01336 GO:GO:0003676 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AC114778 HGNC:HGNC:26232
ProteinModelPortal:H7C0W4 Ensembl:ENST00000435931 Uniprot:H7C0W4
Length = 168
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 47/87 (54%), Positives = 64/87 (73%)
Query: 57 RVT-LKENREVRTLKVADSTACINLSLWDEPGALLHPGDIVRLTKCYAQIWRNCLTLYSS 115
RVT K+ EVR+ KVAD T I +S+WDE G L+ PGDI+RLT+ YA +W+ CLTLY+
Sbjct: 2 RVTKTKDGHEVRSCKVADKTGSITISVWDEIGGLIQPGDIIRLTRGYASMWKGCLTLYTG 61
Query: 116 KSGLIEKIGEFCMVFNENLDMSIPIPN 142
+ G ++KIGEFCMV++E + S P P+
Sbjct: 62 RGGELQKIGEFCMVYSEVPNFSEPNPD 88
>DICTYBASE|DDB_G0279223 [details] [associations]
symbol:DDB_G0279223 "OB fold-containing protein,
nucleic acid binding" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] dictyBase:DDB_G0279223 GO:GO:0003677
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AAFI02000030 eggNOG:NOG285523 RefSeq:XP_641736.1
ProteinModelPortal:Q54X41 EnsemblProtists:DDB0233690 GeneID:8621933
KEGG:ddi:DDB_G0279223 InParanoid:Q54X41 OMA:SKNINCV
ProtClustDB:CLSZ2430701 Uniprot:Q54X41
Length = 183
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 46/101 (45%), Positives = 61/101 (60%)
Query: 43 KNVNVTCIVLDISPRVTLKENREVRTLKVADSTACINLSLWDEPGALLHPGDIVRLTKCY 102
KN+N IVLD P KE + L VADSTA IN+++WD G + PGDI+RL Y
Sbjct: 14 KNINCVFIVLDKGPPTKKKEGTIYQVL-VADSTASINMTVWDALGEQIQPGDILRLKGGY 72
Query: 103 AQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSIPIPNL 143
+ I+ L LY K+G+IEKIGEF F E ++S + N+
Sbjct: 73 SNIYIELLNLYVGKTGIIEKIGEFTFPFVEAPNLSSTLWNV 113
>WB|WBGene00015554 [details] [associations]
symbol:C06G3.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR004365
Pfam:PF01336 GO:GO:0003676 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:FO080396 eggNOG:NOG285523
GeneTree:ENSGT00390000001913 PIR:T30095 RefSeq:NP_501089.1
ProteinModelPortal:Q17749 SMR:Q17749 STRING:Q17749 PaxDb:Q17749
EnsemblMetazoa:C06G3.8 GeneID:177470 KEGG:cel:CELE_C06G3.8
UCSC:C06G3.8 CTD:177470 WormBase:C06G3.8 HOGENOM:HOG000016020
InParanoid:Q17749 OMA:PEFTETF NextBio:896966 Uniprot:Q17749
Length = 137
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 41/113 (36%), Positives = 66/113 (58%)
Query: 32 DVYIKDLHVGIKNVNVTCIVLDISPRVTLK-ENREVRTLKVADSTACINLSLWD-EPGAL 89
D+ + L + + +VT IVLD P + + + + ++KVAD++ IN S+ + E
Sbjct: 4 DIPLHQLQPNMNSFSVTVIVLD--PGIHRRTQTGTIISMKVADASGSINASIMNPEFNET 61
Query: 90 LHPGDIVRLTKCYAQIWRNCLTLYSSKSGLIEKIGEFCMVFNENLDMSI-PIP 141
PGDI++ Y I++ LTL KSG +K+GEF MVF+E D+S+ P+P
Sbjct: 62 FKPGDILKFRGAYTSIYQGGLTLSVGKSGECKKVGEFMMVFSETPDISMMPLP 114
>TAIR|locus:2160614 [details] [associations]
symbol:AT5G63690 "AT5G63690" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AB005234
eggNOG:NOG285523 IPI:IPI00542678 RefSeq:NP_201174.1
UniGene:At.65702 ProteinModelPortal:Q9FFP5 SMR:Q9FFP5 PRIDE:Q9FFP5
DNASU:836489 EnsemblPlants:AT5G63690.1 GeneID:836489
KEGG:ath:AT5G63690 TAIR:At5g63690 HOGENOM:HOG000242378
InParanoid:Q9FFP5 OMA:DECDAFE PhylomeDB:Q9FFP5
ProtClustDB:CLSN2687575 Genevestigator:Q9FFP5 Uniprot:Q9FFP5
Length = 139
Score = 132 (51.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 31 MDVYIKDLHVGIKN-VNVTCIVLDISPRVTLKENREVRTLKVADSTACINLSLWDEPGAL 89
M +++KD+ +N ++ I+LD + + + AD TA +++ LW +
Sbjct: 1 MQLFLKDIVPAAQNNIDTRFIILD-KAKSSAANGKNYCIALAADETAAVHIQLWGDECDA 59
Query: 90 LHPGDIVRLTKCYAQIWRNC-LTLYSSKSGLIEKIGEFCMVFNENLDMS----IPIPNLP 144
GDIV+LT RN L L + K G +EK+GEF + F E ++S IP P P
Sbjct: 60 FEAGDIVKLTNGIFSYVRNSGLILRAGKRGKMEKMGEFTVAFVETPNISEIQWIPDPENP 119
Query: 145 VNAPQS 150
QS
Sbjct: 120 KRYIQS 125
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 264 242 0.00096 113 3 11 22 0.42 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 617 (66 KB)
Total size of DFA: 218 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.27u 0.07s 20.34t Elapsed: 00:00:05
Total cpu time: 20.28u 0.07s 20.35t Elapsed: 00:00:05
Start: Thu Aug 15 11:05:25 2013 End: Thu Aug 15 11:05:30 2013