Your job contains 1 sequence.
>psy3606
MSTHQLEQSFNRNSDDTMDDTDDKDDSKRKSRNLSEKKRRDQFNMLINELCTMVSTNNRK
MDKSTVLKSTIAFLKNYNGLYDCLIMIGYFTNFKCI
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3606
(96 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0023076 - symbol:Clk "Clock" species:7227 "Drosoph... 184 9.6e-14 2
UNIPROTKB|H7C0J4 - symbol:NPAS2 "Neuronal PAS domain-cont... 149 1.2e-10 1
UNIPROTKB|H7C0Z2 - symbol:NPAS2 "Neuronal PAS domain-cont... 143 5.2e-10 1
UNIPROTKB|H7BZA3 - symbol:NPAS2 "Neuronal PAS domain-cont... 143 9.9e-10 1
UNIPROTKB|C9JK03 - symbol:CLOCK "Circadian locomoter outp... 136 2.9e-09 1
UNIPROTKB|J9P4Q7 - symbol:NPAS2 "Uncharacterized protein"... 143 7.4e-09 1
UNIPROTKB|F6QL92 - symbol:NPAS2 "Uncharacterized protein"... 143 9.3e-09 1
UNIPROTKB|F1STF9 - symbol:NPAS2 "Uncharacterized protein"... 143 9.4e-09 1
UNIPROTKB|F1P5G3 - symbol:NPAS2 "Neuronal PAS domain-cont... 143 9.7e-09 1
UNIPROTKB|Q5ZQU2 - symbol:NPAS2 "Neuronal PAS domain-cont... 143 9.7e-09 1
MGI|MGI:109232 - symbol:Npas2 "neuronal PAS domain protei... 143 9.7e-09 1
UNIPROTKB|E1BZV0 - symbol:NPAS2 "Neuronal PAS domain-cont... 143 9.7e-09 1
UNIPROTKB|F1PPU8 - symbol:NPAS2 "Uncharacterized protein"... 143 9.7e-09 1
UNIPROTKB|Q99743 - symbol:NPAS2 "Neuronal PAS domain-cont... 143 9.8e-09 1
UNIPROTKB|F5H027 - symbol:NPAS2 "Neuronal PAS domain-cont... 143 1.1e-08 1
UNIPROTKB|F1NKI9 - symbol:CLOCK "Circadian locomoter outp... 136 1.3e-08 2
UNIPROTKB|F1NKI8 - symbol:CLOCK "Circadian locomoter outp... 136 1.4e-08 2
UNIPROTKB|Q8QGQ6 - symbol:CLOCK "Circadian locomoter outp... 136 1.4e-08 2
UNIPROTKB|F1P1C0 - symbol:CLOCK "Circadian locomoter outp... 136 1.4e-08 2
ZFIN|ZDB-GENE-990630-14 - symbol:clock "clock" species:79... 141 1.8e-08 1
UNIPROTKB|F1RVI1 - symbol:CLOCK "Uncharacterized protein"... 136 1.9e-08 1
RGD|1309681 - symbol:Npas2 "neuronal PAS domain protein 2... 140 2.0e-08 1
ZFIN|ZDB-GENE-030408-3 - symbol:npas2 "neuronal PAS domai... 137 4.4e-08 1
ZFIN|ZDB-GENE-030408-2 - symbol:clock3 "clock homolog 3 (... 136 5.4e-08 1
UNIPROTKB|D4A4R8 - symbol:Clock "Circadian locomoter outp... 136 5.6e-08 1
UNIPROTKB|F1MLT7 - symbol:CLOCK "Uncharacterized protein"... 136 5.7e-08 1
UNIPROTKB|O15516 - symbol:CLOCK "Circadian locomoter outp... 136 5.7e-08 1
UNIPROTKB|Q5RAK8 - symbol:CLOCK "Circadian locomoter outp... 136 5.7e-08 1
UNIPROTKB|F1PSD8 - symbol:CLOCK "Uncharacterized protein"... 136 5.7e-08 1
MGI|MGI:99698 - symbol:Clock "circadian locomotor output ... 136 5.7e-08 1
UNIPROTKB|F1M012 - symbol:Clock "Circadian locomoter outp... 136 5.8e-08 1
RGD|620271 - symbol:Clock "clock circadian regulator" spe... 136 5.8e-08 1
UNIPROTKB|Q9WVS9 - symbol:Clock "Circadian locomoter outp... 136 5.8e-08 1
UNIPROTKB|Q91YB0 - symbol:Clock "Circadian locomoter outp... 136 5.8e-08 1
UNIPROTKB|Q91YB2 - symbol:Clock "Circadian locomoter outp... 136 5.8e-08 1
UNIPROTKB|F1NGR0 - symbol:F1NGR0 "Uncharacterized protein... 133 8.8e-08 1
UNIPROTKB|Q91YA8 - symbol:Clock "Circadian locomoter outp... 132 1.6e-07 1
UNIPROTKB|Q9DG35 - symbol:BMAL1 "BHLH-PAS transcription f... 97 3.9e-05 1
UNIPROTKB|E9PKF0 - symbol:ARNTL "Aryl hydrocarbon recepto... 97 3.9e-05 1
UNIPROTKB|E9PPV4 - symbol:ARNTL "Aryl hydrocarbon recepto... 97 3.9e-05 1
ZFIN|ZDB-GENE-000509-2 - symbol:arntl2 "aryl hydrocarbon ... 104 0.00010 1
UNIPROTKB|H0Y5R1 - symbol:ARNTL2 "Aryl hydrocarbon recept... 103 0.00012 1
UNIPROTKB|Q8WYA1 - symbol:ARNTL2 "Aryl hydrocarbon recept... 103 0.00013 1
UNIPROTKB|F1S6X1 - symbol:LOC100738978 "Uncharacterized p... 97 0.00016 1
UNIPROTKB|F1N4Q7 - symbol:ARNTL2 "Uncharacterized protein... 101 0.00022 1
UNIPROTKB|J9P3T5 - symbol:ARNTL2 "Uncharacterized protein... 99 0.00033 1
UNIPROTKB|Q8QGQ7 - symbol:ARNTL2 "Aryl hydrocarbon recept... 99 0.00035 1
UNIPROTKB|F1NQL8 - symbol:ARNTL2 "Aryl hydrocarbon recept... 99 0.00035 1
UNIPROTKB|E1C1C5 - symbol:ARNTL2 "Aryl hydrocarbon recept... 99 0.00035 1
UNIPROTKB|F1PZY3 - symbol:ARNTL2 "Uncharacterized protein... 99 0.00035 1
UNIPROTKB|F8W6J9 - symbol:ARNTL "Aryl hydrocarbon recepto... 97 0.00046 1
UNIPROTKB|Q5R4T2 - symbol:ARNTL "Aryl hydrocarbon recepto... 97 0.00057 1
UNIPROTKB|E1BLF5 - symbol:ARNTL "Uncharacterized protein"... 97 0.00057 1
UNIPROTKB|O00327 - symbol:ARNTL "Aryl hydrocarbon recepto... 97 0.00057 1
UNIPROTKB|A0MLS5 - symbol:ARNTL "Aryl hydrocarbon recepto... 97 0.00057 1
UNIPROTKB|O88529 - symbol:ARNTL "Aryl hydrocarbon recepto... 97 0.00057 1
UNIPROTKB|Q91YA9 - symbol:Arntl "Aryl hydrocarbon recepto... 97 0.00057 1
RGD|62003 - symbol:Arntl "aryl hydrocarbon receptor nucle... 97 0.00057 1
UNIPROTKB|Q9EPW1 - symbol:Arntl "Aryl hydrocarbon recepto... 97 0.00057 1
ZFIN|ZDB-GENE-000509-1 - symbol:arntl1a "aryl hydrocarbon... 97 0.00057 1
UNIPROTKB|E2R130 - symbol:ARNTL "Uncharacterized protein"... 97 0.00058 1
MGI|MGI:1096381 - symbol:Arntl "aryl hydrocarbon receptor... 97 0.00058 1
UNIPROTKB|Q9I8T7 - symbol:ARNTL "Aryl hydrocarbon recepto... 97 0.00058 1
ZFIN|ZDB-GENE-030408-1 - symbol:arntl1b "aryl hydrocarbon... 97 0.00060 1
UNIPROTKB|J9NTT7 - symbol:ARNTL "Uncharacterized protein"... 97 0.00061 1
>FB|FBgn0023076 [details] [associations]
symbol:Clk "Clock" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;NAS;TAS]
[GO:0007623 "circadian rhythm" evidence=NAS;IMP;TAS] [GO:0046982
"protein heterodimerization activity" evidence=NAS;IPI] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=NAS] [GO:0048148
"behavioral response to cocaine" evidence=NAS;TAS] [GO:0045475
"locomotor rhythm" evidence=IMP;NAS;TAS] [GO:0008062 "eclosion
rhythm" evidence=NAS;TAS] [GO:0045187 "regulation of circadian
sleep/wake cycle, sleep" evidence=IMP] [GO:0007622 "rhythmic
behavior" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IDA;NAS;TAS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0032922
"circadian regulation of gene expression" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0003677
GO:GO:0045187 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 GO:GO:0046982
GO:GO:0048148 GO:GO:0045475 GO:GO:0032922 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG300360 KO:K02223 EMBL:AF065133 EMBL:AF069997
EMBL:AF067207 PIR:T13062 PIR:T13068 PIR:T13071
RefSeq:NP_001014574.1 RefSeq:NP_001014576.1 RefSeq:NP_523964.2
UniGene:Dm.7596 ProteinModelPortal:O61735 SMR:O61735 IntAct:O61735
MINT:MINT-7025605 STRING:O61735 PaxDb:O61735
EnsemblMetazoa:FBtr0100132 GeneID:38872 KEGG:dme:Dmel_CG7391
UCSC:CG7391-RA CTD:363233 FlyBase:FBgn0023076 InParanoid:O61735
OMA:IVACHEE OrthoDB:EOG4HHMHD PhylomeDB:O61735 GenomeRNAi:38872
NextBio:810786 Bgee:O61735 GermOnline:CG7391 GO:GO:0008062
Uniprot:O61735
Length = 1027
Score = 184 (69.8 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 34 LSEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYNGLYD 82
LSEKKRRDQFN L+N+L ++ST++RKMDKSTVLKSTIAFLKN+N D
Sbjct: 22 LSEKKRRDQFNSLVNDLSALISTSSRKMDKSTVLKSTIAFLKNHNEATD 70
Score = 33 (16.7 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 81 YDCLIMIGYFTN 92
Y+ + +GYF N
Sbjct: 190 YELVKFVGYFRN 201
>UNIPROTKB|H7C0J4 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00353 GO:GO:0005737 GO:GO:0003700
GO:GO:0005667 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC016738 EMBL:AC092168 EMBL:AC106891 HGNC:HGNC:7895
ChiTaRS:NPAS2 ProteinModelPortal:H7C0J4 Ensembl:ENST00000451740
Bgee:H7C0J4 Uniprot:H7C0J4
Length = 107
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYNG 79
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +NG
Sbjct: 1 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHNG 45
>UNIPROTKB|H7C0Z2 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 ProteinModelPortal:H7C0Z2
Ensembl:ENST00000427413 Uniprot:H7C0Z2
Length = 208
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 83 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 126
>UNIPROTKB|H7BZA3 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 ProteinModelPortal:H7BZA3
Ensembl:ENST00000448812 Uniprot:H7BZA3
Length = 258
Score = 143 (55.4 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 7 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 50
>UNIPROTKB|C9JK03 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0003677 GO:GO:0009649 GO:GO:0005667
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 GO:GO:0001190
Gene3D:4.10.280.10 SUPFAM:SSF47459 HGNC:HGNC:2082 EMBL:AC069200
EMBL:AC024243 EMBL:AC110372 IPI:IPI00853422
ProteinModelPortal:C9JK03 SMR:C9JK03 STRING:C9JK03
Ensembl:ENST00000435527 HOGENOM:HOG000171249 ArrayExpress:C9JK03
Bgee:C9JK03 Uniprot:C9JK03
Length = 182
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|J9P4Q7 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03007435
Ensembl:ENSCAFT00000047996 Uniprot:J9P4Q7
Length = 668
Score = 143 (55.4 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 7 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 50
>UNIPROTKB|F6QL92 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045475 "locomotor
rhythm" evidence=IEA] [GO:0042745 "circadian sleep/wake cycle"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0045475 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042745 OMA:KFVGNFR EMBL:DAAA02030201 IPI:IPI00706386
Ensembl:ENSBTAT00000026257 Uniprot:F6QL92
Length = 794
Score = 143 (55.4 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 7 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 50
>UNIPROTKB|F1STF9 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:CU407191
EMBL:CU972480 Ensembl:ENSSSCT00000008948 Uniprot:F1STF9
Length = 796
Score = 143 (55.4 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 60
>UNIPROTKB|F1P5G3 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 IPI:IPI00575691
EMBL:AADN02017717 Ensembl:ENSGALT00000027080 ArrayExpress:F1P5G3
Uniprot:F1P5G3
Length = 815
Score = 143 (55.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 60
>UNIPROTKB|Q5ZQU2 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048511
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 HSSP:Q99814 EMBL:AF396828 EMBL:AF193071
IPI:IPI00575691 RefSeq:NP_001025713.1 UniGene:Gga.235
ProteinModelPortal:Q5ZQU2 STRING:Q5ZQU2 GeneID:395433
KEGG:gga:395433 CTD:4862 KO:K09026 NextBio:20815517 Uniprot:Q5ZQU2
Length = 815
Score = 143 (55.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 60
>MGI|MGI:109232 [details] [associations]
symbol:Npas2 "neuronal PAS domain protein 2" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0042745 "circadian sleep/wake
cycle" evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:109232 GO:GO:0005829 GO:GO:0005654 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GO:GO:0045475 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:NOG300360 HOGENOM:HOG000234382 HOVERGEN:HBG050997 CTD:4862
KO:K09026 OrthoDB:EOG444KJQ GO:GO:0042745 EMBL:U77969
IPI:IPI00625137 RefSeq:NP_032745.2 UniGene:Mm.2380
ProteinModelPortal:P97460 SMR:P97460 STRING:P97460
PhosphoSite:P97460 PRIDE:P97460 GeneID:18143 KEGG:mmu:18143
UCSC:uc007atd.2 InParanoid:P97460 NextBio:293396 CleanEx:MM_NPAS2
Genevestigator:P97460 GermOnline:ENSMUSG00000026077 Uniprot:P97460
Length = 816
Score = 143 (55.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 60
>UNIPROTKB|E1BZV0 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0042745 "circadian
sleep/wake cycle" evidence=IEA] [GO:0045475 "locomotor rhythm"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:AADN02017717
IPI:IPI00823351 Ensembl:ENSGALT00000036585 ArrayExpress:E1BZV0
Uniprot:E1BZV0
Length = 817
Score = 143 (55.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 19 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 62
>UNIPROTKB|F1PPU8 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:AAEX03007435
Ensembl:ENSCAFT00000003487 Uniprot:F1PPU8
Length = 818
Score = 143 (55.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 60
>UNIPROTKB|Q99743 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0042745 "circadian sleep/wake
cycle" evidence=IEA] [GO:0045475 "locomotor rhythm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0007417 "central nervous system development" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0051879 "Hsp90 protein
binding" evidence=IDA] Reactome:REACT_111217 InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005829
GO:GO:0044281 GO:GO:0003677 GO:GO:0045944 GO:GO:0007417
GO:GO:0003700 GO:GO:0044255 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 MIM:608516 GO:GO:0045475 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0051879
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
eggNOG:NOG300360 HOVERGEN:HBG050997 CTD:4862 KO:K09026 EMBL:U77970
EMBL:AC016738 EMBL:AC092168 EMBL:AC106891 EMBL:BC051351
EMBL:BC072383 EMBL:U51625 IPI:IPI00956556 RefSeq:NP_002509.2
UniGene:Hs.156832 UniGene:Hs.705895 ProteinModelPortal:Q99743
SMR:Q99743 IntAct:Q99743 STRING:Q99743 PhosphoSite:Q99743
DMDM:311033423 PaxDb:Q99743 PRIDE:Q99743 Ensembl:ENST00000335681
GeneID:4862 KEGG:hsa:4862 UCSC:uc002tap.1 GeneCards:GC02P101436
H-InvDB:HIX0200274 HGNC:HGNC:7895 HPA:HPA019674 MIM:603347
neXtProt:NX_Q99743 PharmGKB:PA31696 InParanoid:Q99743
OrthoDB:EOG444KJQ PhylomeDB:Q99743 ChiTaRS:NPAS2 GenomeRNAi:4862
NextBio:18730 ArrayExpress:Q99743 Bgee:Q99743 CleanEx:HS_NPAS2
Genevestigator:Q99743 GermOnline:ENSG00000170485 GO:GO:0042745
Uniprot:Q99743
Length = 824
Score = 143 (55.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 60
>UNIPROTKB|F5H027 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 IPI:IPI00916781
ProteinModelPortal:F5H027 SMR:F5H027 Ensembl:ENST00000542504
UCSC:uc010yvt.1 OMA:KFVGNFR ArrayExpress:F5H027 Bgee:F5H027
Uniprot:F5H027
Length = 889
Score = 143 (55.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RKMDK+TVL+ I FL+ +N
Sbjct: 82 SEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN 125
>UNIPROTKB|F1NKI9 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AADN02031315
EMBL:AADN02031314 IPI:IPI00581385 Ensembl:ENSGALT00000037539
ArrayExpress:F1NKI9 Uniprot:F1NKI9
Length = 854
Score = 136 (52.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
Score = 30 (15.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 4/10 (40%), Positives = 7/10 (70%)
Query: 87 IGYFTNFKCI 96
+ + NFKC+
Sbjct: 213 VKFIGNFKCL 222
>UNIPROTKB|F1NKI8 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AADN02031315
EMBL:AADN02031314 IPI:IPI01017404 Ensembl:ENSGALT00000037540
ArrayExpress:F1NKI8 Uniprot:F1NKI8
Length = 859
Score = 136 (52.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 43 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 85
Score = 30 (15.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 4/10 (40%), Positives = 7/10 (70%)
Query: 87 IGYFTNFKCI 96
+ + NFKC+
Sbjct: 214 VKFIGNFKCL 223
>UNIPROTKB|Q8QGQ6 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0071479
"cellular response to ionizing radiation" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0005667
GO:GO:0000978 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 GO:GO:0071479 GO:GO:0070888 EMBL:AF132531 EMBL:AF144425
EMBL:AF246959 IPI:IPI00814237 IPI:IPI00819507 RefSeq:NP_989505.2
UniGene:Gga.2707 ProteinModelPortal:Q8QGQ6 STRING:Q8QGQ6
GeneID:373991 KEGG:gga:373991 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 InParanoid:Q8QGQ6 KO:K02223
NextBio:20813520 ArrayExpress:Q8QGQ6 Uniprot:Q8QGQ6
Length = 875
Score = 136 (52.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
Score = 30 (15.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 4/10 (40%), Positives = 7/10 (70%)
Query: 87 IGYFTNFKCI 96
+ + NFKC+
Sbjct: 213 VKFIGNFKCL 222
>UNIPROTKB|F1P1C0 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0071479 "cellular response to ionizing radiation" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0000077 GO:GO:0005694 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071479 GO:GO:0070888 IPI:IPI00819507
OMA:AHEKMAQ EMBL:AADN02031315 EMBL:AADN02031314
Ensembl:ENSGALT00000022394 ArrayExpress:F1P1C0 Uniprot:F1P1C0
Length = 877
Score = 136 (52.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
Score = 30 (15.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 4/10 (40%), Positives = 7/10 (70%)
Query: 87 IGYFTNFKCI 96
+ + NFKC+
Sbjct: 213 VKFIGNFKCL 222
>ZFIN|ZDB-GENE-990630-14 [details] [associations]
symbol:clock "clock" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046982
"protein heterodimerization activity" evidence=NAS] [GO:0009648
"photoperiodism" evidence=IEP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IGI;IMP]
[GO:0009416 "response to light stimulus" evidence=IGI;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009266 "response to temperature stimulus" evidence=IDA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-990630-14 GO:GO:0005737 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009266 GO:GO:0009648 CTD:9575 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 HSSP:Q99814 EMBL:AF133306
IPI:IPI00503983 RefSeq:NP_571032.1 UniGene:Dr.81289
ProteinModelPortal:Q9W6J4 DIP:DIP-46451N STRING:Q9W6J4 GeneID:30140
KEGG:dre:30140 InParanoid:Q9W6J4 NextBio:20806615
ArrayExpress:Q9W6J4 Uniprot:Q9W6J4
Length = 893
Score = 141 (54.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL TM+ N RKMDKST+L+ +I FL+ +
Sbjct: 33 SEKKRRDQFNVLIKELGTMLPGNTRKMDKSTILQKSIDFLRKH 75
>UNIPROTKB|F1RVI1 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CU861936 Ensembl:ENSSSCT00000009755
OMA:ANARRAW Uniprot:F1RVI1
Length = 410
Score = 136 (52.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>RGD|1309681 [details] [associations]
symbol:Npas2 "neuronal PAS domain protein 2" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0042745 "circadian
sleep/wake cycle" evidence=IEA;ISO] [GO:0045475 "locomotor rhythm"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:1309681 GO:GO:0005737
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0045475 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:4862 KO:K09026 GO:GO:0042745 IPI:IPI00870127
RefSeq:NP_001101684.2 UniGene:Rn.8285 Ensembl:ENSRNOT00000059571
GeneID:316351 KEGG:rno:316351 UCSC:RGD:1309681 NextBio:670757
Uniprot:F1MAG2
Length = 816
Score = 140 (54.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNYN 78
SEKKRRDQFN+LI EL +M+ N RK+DK+TVL+ I FL+ +N
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTRKLDKTTVLEKVIGFLQKHN 60
>ZFIN|ZDB-GENE-030408-3 [details] [associations]
symbol:npas2 "neuronal PAS domain protein 2"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0009648
"photoperiodism" evidence=IEP] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0009416 "response to light stimulus"
evidence=IGI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-030408-3 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009648 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 HSSP:Q99814 CTD:4862 OrthoDB:EOG444KJQ
OMA:GHPRKMD EMBL:CU464080 EMBL:BC163256 EMBL:AB087255
IPI:IPI00505783 RefSeq:NP_840084.1 UniGene:Dr.24959 STRING:Q8JIG3
Ensembl:ENSDART00000014806 GeneID:352934 KEGG:dre:352934
InParanoid:Q8JIG3 NextBio:20812676 Uniprot:Q8JIG3
Length = 845
Score = 137 (53.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNN--RKMDKSTVLKSTIAFLK 75
SEKKRRDQFN+LI ELCTM+ RKMDKST+L+ TI FL+
Sbjct: 50 SEKKRRDQFNVLIKELCTMLQGQGHPRKMDKSTILQRTIDFLQ 92
>ZFIN|ZDB-GENE-030408-2 [details] [associations]
symbol:clock3 "clock homolog 3 (mouse)" species:7955
"Danio rerio" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009648
"photoperiodism" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009416 "response to light stimulus"
evidence=IGI] [GO:0007623 "circadian rhythm" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-030408-2 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009648 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 OrthoDB:EOG476JZV EMBL:BX901913 EMBL:BX548248
EMBL:CR926462 EMBL:BC162682 IPI:IPI00483024 UniGene:Dr.86747
STRING:B3DH92 Ensembl:ENSDART00000103119 Ensembl:ENSDART00000133959
Uniprot:B3DH92
Length = 820
Score = 136 (52.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLK 75
SEKKRRDQFN+LI EL TM+ N RKMDKST+L+ +I +L+
Sbjct: 32 SEKKRRDQFNVLIKELGTMLPGNTRKMDKSTILQKSIDYLR 72
>UNIPROTKB|D4A4R8 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00201128 UniGene:Rn.205839 EMBL:CH473981
Ensembl:ENSRNOT00000002981 Uniprot:D4A4R8
Length = 833
Score = 136 (52.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|F1MLT7 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071479 GO:GO:0070888 OMA:AHEKMAQ EMBL:DAAA02017731
EMBL:DAAA02017732 IPI:IPI00999446 Ensembl:ENSBTAT00000061480
Uniprot:F1MLT7
Length = 846
Score = 136 (52.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 43 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 85
>UNIPROTKB|O15516 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IDA] [GO:0000077
"DNA damage checkpoint" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0032922 "circadian regulation of gene expression" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007623 "circadian rhythm"
evidence=TAS] [GO:0009648 "photoperiodism" evidence=TAS]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0070888
"E-box binding" evidence=IDA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005829 GO:GO:0000077
GO:GO:0005694 GO:GO:0007165 GO:GO:0009649 GO:GO:0016573
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071479 GO:GO:0070888
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
PDB:4H10 PDBsum:4H10 GO:GO:0004402 GO:GO:0009648 CTD:9575
eggNOG:NOG300360 HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223
EMBL:AF011568 EMBL:AH008440 EMBL:EF015897 EMBL:AB002332
EMBL:AK291708 EMBL:BC126157 EMBL:BC126159 EMBL:AB005535
IPI:IPI00007284 RefSeq:NP_001254772.1 RefSeq:NP_004889.1
UniGene:Hs.436975 UniGene:Hs.689578 ProteinModelPortal:O15516
SMR:O15516 IntAct:O15516 STRING:O15516 PhosphoSite:O15516
PRIDE:O15516 DNASU:9575 Ensembl:ENST00000309964
Ensembl:ENST00000381322 Ensembl:ENST00000513440 GeneID:9575
KEGG:hsa:9575 UCSC:uc003haz.1 GeneCards:GC04M056294 HGNC:HGNC:2082
HPA:HPA001867 HPA:HPA027565 MIM:601851 neXtProt:NX_O15516
PharmGKB:PA26609 InParanoid:O15516 OMA:AHEKMAQ OrthoDB:EOG476JZV
PhylomeDB:O15516 GenomeRNAi:9575 NextBio:35907 ArrayExpress:O15516
Bgee:O15516 CleanEx:HS_CLOCK Genevestigator:O15516
GermOnline:ENSG00000134852 Uniprot:O15516
Length = 846
Score = 136 (52.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|Q5RAK8 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9601 "Pongo abelii" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0005694
GO:GO:0003677 GO:GO:0016573 GO:GO:0003700 GO:GO:0006351
GO:GO:0006974 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0004402 CTD:9575 HOVERGEN:HBG050997 KO:K02223 EMBL:CR859007
RefSeq:NP_001125706.1 UniGene:Pab.7567 ProteinModelPortal:Q5RAK8
GeneID:100172630 KEGG:pon:100172630 InParanoid:Q5RAK8
Uniprot:Q5RAK8
Length = 846
Score = 136 (52.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|F1PSD8 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071479 GO:GO:0070888 OMA:AHEKMAQ EMBL:AAEX03009082
Ensembl:ENSCAFT00000003400 Uniprot:F1PSD8
Length = 848
Score = 136 (52.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 43 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 85
>MGI|MGI:99698 [details] [associations]
symbol:Clock "circadian locomotor output cycles kaput"
species:10090 "Mus musculus" [GO:0000077 "DNA damage checkpoint"
evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO] [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA;IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IDA;IMP]
[GO:0008134 "transcription factor binding" evidence=ISA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016746
"transferase activity, transferring acyl groups" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IC;ISO;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:99698 GO:GO:0005829 GO:GO:0000077 GO:GO:0005694
GO:GO:0009649 GO:GO:0016573 GO:GO:0005667 GO:GO:0000978
GO:GO:0001077 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0071479 GO:GO:0070888
Reactome:REACT_109335 Reactome:REACT_24972 PDB:4F3L PDBsum:4F3L
GO:GO:0004402 CTD:9575 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 OMA:AHEKMAQ OrthoDB:EOG476JZV
EMBL:AF000998 EMBL:AF146793 IPI:IPI00230536 IPI:IPI00420596
RefSeq:NP_031741.1 UniGene:Mm.3552 UniGene:Mm.392894
ProteinModelPortal:O08785 SMR:O08785 DIP:DIP-30958N IntAct:O08785
MINT:MINT-4654078 STRING:O08785 PhosphoSite:O08785 PRIDE:O08785
DNASU:12753 Ensembl:ENSMUST00000075159 GeneID:12753 KEGG:mmu:12753
InParanoid:O08785 NextBio:282092 Bgee:O08785 CleanEx:MM_CLOCK
Genevestigator:O08785 GermOnline:ENSMUSG00000029238 Uniprot:O08785
Length = 855
Score = 136 (52.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|F1M012 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00557436 Ensembl:ENSRNOT00000051891
ArrayExpress:F1M012 Uniprot:F1M012
Length = 857
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 44 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 86
>RGD|620271 [details] [associations]
symbol:Clock "clock circadian regulator" species:10116 "Rattus
norvegicus" [GO:0000077 "DNA damage checkpoint" evidence=IEA;ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=ISO;NAS] [GO:0009649
"entrainment of circadian clock" evidence=IEP] [GO:0032922
"circadian regulation of gene expression" evidence=IEA;ISO;ISS]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA;ISO] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:620271 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0009649
GO:GO:0016573 GO:GO:0003700 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0071479 GO:GO:0070888 GO:GO:0004402 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223 EMBL:AB019258
EMBL:AB019259 IPI:IPI00201128 IPI:IPI00205319 RefSeq:NP_068628.1
UniGene:Rn.205839 ProteinModelPortal:Q9WVS9 STRING:Q9WVS9
PhosphoSite:Q9WVS9 GeneID:60447 KEGG:rno:60447 UCSC:RGD:620271
InParanoid:Q9WVS9 NextBio:612192 ArrayExpress:Q9WVS9
Genevestigator:Q9WVS9 GermOnline:ENSRNOG00000002175 Uniprot:Q9WVS9
Length = 862
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|Q9WVS9 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0009649
GO:GO:0016573 GO:GO:0003700 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0071479 GO:GO:0070888 GO:GO:0004402 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223 EMBL:AB019258
EMBL:AB019259 IPI:IPI00201128 IPI:IPI00205319 RefSeq:NP_068628.1
UniGene:Rn.205839 ProteinModelPortal:Q9WVS9 STRING:Q9WVS9
PhosphoSite:Q9WVS9 GeneID:60447 KEGG:rno:60447 UCSC:RGD:620271
InParanoid:Q9WVS9 NextBio:612192 ArrayExpress:Q9WVS9
Genevestigator:Q9WVS9 GermOnline:ENSRNOG00000002175 Uniprot:Q9WVS9
Length = 862
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|Q91YB0 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:1026970 "Nannospalax galili" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 EMBL:AJ318057
GO:GO:0005737 GO:GO:0005694 GO:GO:0003677 GO:GO:0016573
GO:GO:0003700 GO:GO:0006351 GO:GO:0006974 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 GO:GO:0004402 HOVERGEN:HBG050997
ProteinModelPortal:Q91YB0 Uniprot:Q91YB0
Length = 865
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|Q91YB2 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:164324 "Spalax carmeli" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0016573 GO:GO:0003700
GO:GO:0006351 GO:GO:0006974 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 GO:GO:0004402 HOVERGEN:HBG050997 EMBL:AJ318058
ProteinModelPortal:Q91YB2 Uniprot:Q91YB2
Length = 865
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N RKMDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|F1NGR0 [details] [associations]
symbol:F1NGR0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AADN02013650 EMBL:AADN02013651 IPI:IPI00577457
Ensembl:ENSGALT00000014751 OMA:GHPRKMD Uniprot:F1NGR0
Length = 675
Score = 133 (51.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNR--KMDKSTVLKSTIAFLK 75
SEKKRRDQFN+LI ELCTM+ + KMDKST+L+ TI FL+
Sbjct: 18 SEKKRRDQFNVLIKELCTMLQGHGHPLKMDKSTILQRTIDFLQ 60
>UNIPROTKB|Q91YA8 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:134510 "Nannospalax judaei" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0016573 GO:GO:0003700
GO:GO:0006351 GO:GO:0006974 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 HOVERGEN:HBG050997 EMBL:AJ318059 HSSP:Q99814
ProteinModelPortal:Q91YA8 Uniprot:Q91YA8
Length = 865
Score = 132 (51.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNNRKMDKSTVLKSTIAFLKNY 77
SEKKRRDQFN+LI EL +M+ N R+MDKSTVL+ +I FL+ +
Sbjct: 42 SEKKRRDQFNVLIKELGSMLPGNAREMDKSTVLQKSIDFLRKH 84
>UNIPROTKB|Q9DG35 [details] [associations]
symbol:BMAL1 "BHLH-PAS transcription factor BMAL1"
species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0007623 GO:GO:0005667 GO:GO:0000060
GO:GO:0004871 GO:GO:0000982 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 HOVERGEN:HBG000164 UniGene:Gga.1329 EMBL:AADN02030623
EMBL:AF193070 IPI:IPI00679553 STRING:Q9DG35
Ensembl:ENSGALT00000008634 HOGENOM:HOG000199297 InParanoid:Q9DG35
Uniprot:Q9DG35
Length = 127
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 2 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 48
>UNIPROTKB|E9PKF0 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000060 "protein import
into nucleus, translocation" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0005667 GO:GO:0000060 GO:GO:0000982 GO:GO:0001190
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042176 EMBL:AC016884
EMBL:AC022878 IPI:IPI00413132 HGNC:HGNC:701
ProteinModelPortal:E9PKF0 SMR:E9PKF0 Ensembl:ENST00000529388
ArrayExpress:E9PKF0 Bgee:E9PKF0 Uniprot:E9PKF0
Length = 135
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|E9PPV4 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884 EMBL:AC022878
HGNC:HGNC:701 IPI:IPI00978797 ProteinModelPortal:E9PPV4 SMR:E9PPV4
Ensembl:ENST00000530357 ArrayExpress:E9PPV4 Bgee:E9PPV4
Uniprot:E9PPV4
Length = 141
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 84
>ZFIN|ZDB-GENE-000509-2 [details] [associations]
symbol:arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-2
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG107503 OrthoDB:EOG4DFPNB GO:GO:0009648
eggNOG:NOG285764 EMBL:BC128806 IPI:IPI00482035 UniGene:Dr.81323
ProteinModelPortal:A1A5T9 InParanoid:A1A5T9 ArrayExpress:A1A5T9
Uniprot:A1A5T9
Length = 631
Score = 104 (41.7 bits), Expect = 0.00010, P = 0.00010
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N LI+EL M+ T N RK+DK TVL+ + LK+ G
Sbjct: 98 EKRRRDKMNNLIDELAAMIPTCNPMSRKLDKLTVLRMAVQHLKSLKG 144
>UNIPROTKB|H0Y5R1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC068794
EMBL:AC092829 HGNC:HGNC:18984 Ensembl:ENST00000457040
Uniprot:H0Y5R1
Length = 588
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNGLYDCLIMIGYFT 91
+EK+RRD+ N LI EL M+ N RK+DK TVL+ + L++ GL + + Y
Sbjct: 67 TEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKGLTNSYVGSNYRP 126
Query: 92 NF 93
+F
Sbjct: 127 SF 128
>UNIPROTKB|Q8WYA1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0009649 "entrainment of circadian clock"
evidence=NAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007623 "circadian
rhythm" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0009649 GO:GO:0007623 GO:GO:0045944
GO:GO:0005667 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG107503 CTD:56938 eggNOG:NOG288887 KO:K09099
EMBL:AB039921 EMBL:AF256215 EMBL:AF231338 EMBL:AF231339
EMBL:AF246960 EMBL:AF246961 EMBL:AF246962 EMBL:AF246963
EMBL:AK296706 EMBL:AC068794 EMBL:AC092829 EMBL:BC000172
EMBL:BC125061 EMBL:BC125062 IPI:IPI00142781 IPI:IPI00163662
IPI:IPI00465306 IPI:IPI00788724 IPI:IPI00789255 IPI:IPI00795339
IPI:IPI00827866 IPI:IPI00827897 IPI:IPI01009213
RefSeq:NP_001234931.1 RefSeq:NP_001234932.1 RefSeq:NP_001234933.1
RefSeq:NP_001234934.1 RefSeq:NP_064568.3 UniGene:Hs.434269
UniGene:Hs.445447 PDB:2KDK PDBsum:2KDK ProteinModelPortal:Q8WYA1
SMR:Q8WYA1 IntAct:Q8WYA1 STRING:Q8WYA1 PhosphoSite:Q8WYA1
DMDM:124007121 PaxDb:Q8WYA1 PRIDE:Q8WYA1 Ensembl:ENST00000261178
Ensembl:ENST00000266503 Ensembl:ENST00000311001
Ensembl:ENST00000395901 Ensembl:ENST00000542388
Ensembl:ENST00000544915 Ensembl:ENST00000546179 GeneID:56938
KEGG:hsa:56938 UCSC:uc001rht.2 UCSC:uc001rhu.2 UCSC:uc001rhv.2
UCSC:uc001rhw.3 UCSC:uc009zji.2 GeneCards:GC12P027485
H-InvDB:HIX0037110 HGNC:HGNC:18984 MIM:614517 neXtProt:NX_Q8WYA1
PharmGKB:PA134896555 InParanoid:Q8WYA1 OMA:IPQCNPM PhylomeDB:Q8WYA1
GenomeRNAi:56938 NextBio:62501 ArrayExpress:Q8WYA1 Bgee:Q8WYA1
CleanEx:HS_ARNTL2 Genevestigator:Q8WYA1 Uniprot:Q8WYA1
Length = 636
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNGLYDCLIMIGYFT 91
+EK+RRD+ N LI EL M+ N RK+DK TVL+ + L++ GL + + Y
Sbjct: 115 TEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKGLTNSYVGSNYRP 174
Query: 92 NF 93
+F
Sbjct: 175 SF 176
>UNIPROTKB|F1S6X1 [details] [associations]
symbol:LOC100738978 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU914667
Ensembl:ENSSSCT00000014635 OMA:KKXILNG Uniprot:F1S6X1
Length = 273
Score = 97 (39.2 bits), Expect = 0.00016, P = 0.00016
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|F1N4Q7 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0045944 GO:GO:0005667 GO:GO:0004871 GO:GO:0000982
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:IPQCNPM EMBL:DAAA02014003
IPI:IPI00837789 Ensembl:ENSBTAT00000043261 Uniprot:F1N4Q7
Length = 629
Score = 101 (40.6 bits), Expect = 0.00022, P = 0.00022
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 35 SEKKRRDQFNMLINELCTMV---STNNRKMDKSTVLKSTIAFLKNYNGLYDC 83
+EK+RRD+ N LI +L TM+ S RK+DK TVL+ + L++ G+ C
Sbjct: 105 TEKRRRDKMNNLIGKLSTMIPQCSPMARKLDKLTVLRLAVQHLRSLKGMTSC 156
>UNIPROTKB|J9P3T5 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03015178
Ensembl:ENSCAFT00000046810 Uniprot:J9P3T5
Length = 593
Score = 99 (39.9 bits), Expect = 0.00033, P = 0.00033
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNGL 80
+EK+RRD+ N LI EL M+ N RK+DK TVL+ + LK+ G+
Sbjct: 73 TEKRRRDKMNNLIEELSAMIPQCNPVPRKLDKLTVLRMAVQHLKSLKGM 121
>UNIPROTKB|Q8QGQ7 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048511 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P27540 HOVERGEN:HBG107503 EMBL:AF246958
IPI:IPI00819869 RefSeq:NP_989464.1 UniGene:Gga.2818
ProteinModelPortal:Q8QGQ7 GeneID:373925 KEGG:gga:373925 CTD:56938
eggNOG:NOG288887 KO:K09099 NextBio:20813457 Uniprot:Q8QGQ7
Length = 622
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNGLYDCLIMIGYFT 91
+EK+RRD+ N LI EL M+ N RK+DK TVL+ + LK+ G + Y
Sbjct: 100 TEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKGSTSSYTEVRYKP 159
Query: 92 NF 93
+F
Sbjct: 160 SF 161
>UNIPROTKB|F1NQL8 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00819869 EMBL:AADN02006684
Ensembl:ENSGALT00000037361 ArrayExpress:F1NQL8 Uniprot:F1NQL8
Length = 623
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNGLYDCLIMIGYFT 91
+EK+RRD+ N LI EL M+ N RK+DK TVL+ + LK+ G + Y
Sbjct: 100 TEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKGSTSSYTEVRYKP 159
Query: 92 NF 93
+F
Sbjct: 160 SF 161
>UNIPROTKB|E1C1C5 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AADN02006684 IPI:IPI00598933
Ensembl:ENSGALT00000022820 ArrayExpress:E1C1C5 Uniprot:E1C1C5
Length = 624
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNGLYDCLIMIGYFT 91
+EK+RRD+ N LI EL M+ N RK+DK TVL+ + LK+ G + Y
Sbjct: 100 TEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKGSTSSYTEVRYKP 159
Query: 92 NF 93
+F
Sbjct: 160 SF 161
>UNIPROTKB|F1PZY3 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AAEX03015178 Ensembl:ENSCAFT00000017664
Uniprot:F1PZY3
Length = 624
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 35 SEKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNGL 80
+EK+RRD+ N LI EL M+ N RK+DK TVL+ + LK+ G+
Sbjct: 104 TEKRRRDKMNNLIEELSAMIPQCNPVPRKLDKLTVLRMAVQHLKSLKGM 152
>UNIPROTKB|F8W6J9 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884
EMBL:AC022878 IPI:IPI00217732 HGNC:HGNC:701
ProteinModelPortal:F8W6J9 SMR:F8W6J9 Ensembl:ENST00000389708
ArrayExpress:F8W6J9 Bgee:F8W6J9 Uniprot:F8W6J9
Length = 526
Score = 97 (39.2 bits), Expect = 0.00046, P = 0.00046
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|Q5R4T2 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9601 "Pongo abelii"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 CTD:406
HOVERGEN:HBG107503 KO:K02296 EMBL:CR861161 RefSeq:NP_001126900.1
UniGene:Pab.3880 ProteinModelPortal:Q5R4T2 GeneID:100173916
KEGG:pon:100173916 Uniprot:Q5R4T2
Length = 625
Score = 97 (39.2 bits), Expect = 0.00057, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|E1BLF5 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 CTD:406 KO:K02296 OMA:EKINTNC EMBL:DAAA02040648
IPI:IPI00712443 RefSeq:NP_001178099.1 UniGene:Bt.39079 PRIDE:E1BLF5
Ensembl:ENSBTAT00000017323 GeneID:530705 KEGG:bta:530705
NextBio:20875311 Uniprot:E1BLF5
Length = 626
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|O00327 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IPI] [GO:0051879
"Hsp90 protein binding" evidence=IDA] [GO:0000982 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
EMBL:CH471064 GO:GO:0003677 GO:GO:0045944 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
HOGENOM:HOG000234379 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0051879 GO:GO:0042176 Pathway_Interaction_DB:circadianpathway
Reactome:REACT_24941 CTD:406 HOVERGEN:HBG107503 KO:K02296
OMA:EKINTNC OrthoDB:EOG4NS3B2 EMBL:D89722 EMBL:AB000812
EMBL:AB000813 EMBL:AB000814 EMBL:AB000815 EMBL:AB000816 EMBL:U51627
EMBL:U60415 EMBL:AF044288 EMBL:AK095749 EMBL:AK291510 EMBL:EF015894
EMBL:AC016884 EMBL:AC022878 EMBL:BC016674 EMBL:BC031214
EMBL:BC041129 IPI:IPI00217732 IPI:IPI00217734 IPI:IPI00217735
IPI:IPI00217736 IPI:IPI00412162 IPI:IPI00413132 IPI:IPI00783543
IPI:IPI00879656 IPI:IPI00910251 PIR:JC5405 PIR:JC5407 PIR:PC4288
PIR:PC4289 RefSeq:NP_001025443.1 RefSeq:NP_001025444.1
RefSeq:NP_001169.3 UniGene:Hs.65734 PDB:4H10 PDBsum:4H10
ProteinModelPortal:O00327 SMR:O00327 IntAct:O00327 STRING:O00327
PhosphoSite:O00327 PaxDb:O00327 PRIDE:O00327 DNASU:406
Ensembl:ENST00000361003 Ensembl:ENST00000389707
Ensembl:ENST00000396441 Ensembl:ENST00000401424
Ensembl:ENST00000403290 Ensembl:ENST00000403482
Ensembl:ENST00000403510 GeneID:406 KEGG:hsa:406 UCSC:uc001mkp.3
UCSC:uc001mkr.3 UCSC:uc001mks.3 UCSC:uc001mkx.3 UCSC:uc009ygm.1
GeneCards:GC11P013299 HGNC:HGNC:701 MIM:602550 neXtProt:NX_O00327
PharmGKB:PA24996 InParanoid:O00327 GenomeRNAi:406 NextBio:1701
ArrayExpress:O00327 Bgee:O00327 Genevestigator:O00327
GermOnline:ENSG00000133794 Uniprot:O00327
Length = 626
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|A0MLS5 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9796 "Equus caballus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296
OrthoDB:EOG4NS3B2 EMBL:DQ988038 RefSeq:NP_001075390.1
UniGene:Eca.2805 ProteinModelPortal:A0MLS5 STRING:A0MLS5
GeneID:100034115 KEGG:ecb:100034115 InParanoid:A0MLS5
Uniprot:A0MLS5
Length = 626
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|O88529 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10036 "Mesocricetus auratus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 EMBL:AF070917
ProteinModelPortal:O88529 IntAct:O88529 Uniprot:O88529
Length = 626
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|Q91YA9 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:1026970 "Nannospalax galili"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AJ318060 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
HOVERGEN:HBG107503 ProteinModelPortal:Q91YA9 Uniprot:Q91YA9
Length = 626
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>RGD|62003 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear translocator-like"
species:10116 "Rattus norvegicus" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISO] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007623 "circadian rhythm"
evidence=IEP;ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0032922 "circadian regulation of gene expression"
evidence=ISO;ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=NAS] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:62003 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0042752 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296 EMBL:AB012600
EMBL:AF015953 EMBL:AF317669 EMBL:BC099833 IPI:IPI00339130
IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2 UniGene:Rn.14532
ProteinModelPortal:Q9EPW1 STRING:Q9EPW1 PhosphoSite:Q9EPW1
Ensembl:ENSRNOT00000019645 GeneID:29657 KEGG:rno:29657
UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>UNIPROTKB|Q9EPW1 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:62003
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503
KO:K02296 EMBL:AB012600 EMBL:AF015953 EMBL:AF317669 EMBL:BC099833
IPI:IPI00339130 IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2
UniGene:Rn.14532 ProteinModelPortal:Q9EPW1 STRING:Q9EPW1
PhosphoSite:Q9EPW1 Ensembl:ENSRNOT00000019645 GeneID:29657
KEGG:rno:29657 UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>ZFIN|ZDB-GENE-000509-1 [details] [associations]
symbol:arntl1a "aryl hydrocarbon receptor nuclear
translocator-like 1a" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0007623 "circadian rhythm" evidence=IGI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-1
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC GO:GO:0009648
EMBL:CR759966 EMBL:AF144689 EMBL:AF144690 IPI:IPI00490446
RefSeq:NP_571652.1 UniGene:Dr.75458 DIP:DIP-46453N STRING:Q9I879
Ensembl:ENSDART00000023959 Ensembl:ENSDART00000148660 GeneID:58098
KEGG:dre:58098 CTD:58098 InParanoid:Q9I879 NextBio:20892352
Uniprot:Q9I879
Length = 626
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00057
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 85 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 131
>UNIPROTKB|E2R130 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03012928
Ensembl:ENSCAFT00000012969 Uniprot:E2R130
Length = 627
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00058
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
>MGI|MGI:1096381 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear
translocator-like" species:10090 "Mus musculus" [GO:0000060
"protein import into nucleus, translocation" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA;IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IDA;IMP] [GO:0008134 "transcription factor binding"
evidence=ISA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=ISO] [GO:0032922
"circadian regulation of gene expression" evidence=IDA] [GO:0042176
"regulation of protein catabolic process" evidence=IDA] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IC;ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:1096381 GO:GO:0005829 GO:GO:0003677 GO:GO:0005667
GO:GO:0001077 GO:GO:0000060 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0042176
GO:GO:0016604 Reactome:REACT_109335 Reactome:REACT_24972 CTD:406
HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC OrthoDB:EOG4NS3B2
EMBL:AB012601 EMBL:AB015203 EMBL:AB012602 EMBL:AB014494
EMBL:BC025973 EMBL:BC011080 IPI:IPI00403502 IPI:IPI00462286
IPI:IPI00474434 IPI:IPI00474567 IPI:IPI00875930 PIR:JE0270
RefSeq:NP_001229977.1 RefSeq:NP_031515.1 UniGene:Mm.440371 PDB:4F3L
PDBsum:4F3L ProteinModelPortal:Q9WTL8 SMR:Q9WTL8 DIP:DIP-43977N
IntAct:Q9WTL8 MINT:MINT-1657344 STRING:Q9WTL8 PhosphoSite:Q9WTL8
PaxDb:Q9WTL8 PRIDE:Q9WTL8 Ensembl:ENSMUST00000047321 GeneID:11865
KEGG:mmu:11865 UCSC:uc009jhf.1 UCSC:uc009jhi.1 UCSC:uc009jhj.1
InParanoid:Q9WTL8 NextBio:279875 Bgee:Q9WTL8 Genevestigator:Q9WTL8
GermOnline:ENSMUSG00000055116 Uniprot:Q9WTL8
Length = 632
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00058
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 88 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 134
>UNIPROTKB|Q9I8T7 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 GO:GO:0042176
EMBL:AF205219 EMBL:AF246957 IPI:IPI00577807 RefSeq:NP_001001463.1
UniGene:Gga.1329 ProteinModelPortal:Q9I8T7 STRING:Q9I8T7
Ensembl:ENSGALT00000032732 GeneID:374115 KEGG:gga:374115 CTD:406
HOVERGEN:HBG107503 InParanoid:Q9I8T7 KO:K02296 OMA:EKINTNC
OrthoDB:EOG4NS3B2 NextBio:20813631 ArrayExpress:Q9I8T7
Uniprot:Q9I8T7
Length = 633
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00058
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 88 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 134
>ZFIN|ZDB-GENE-030408-1 [details] [associations]
symbol:arntl1b "aryl hydrocarbon receptor nuclear
translocator-like 1b" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0009648 "photoperiodism" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-030408-1
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009648 EMBL:CR318647 IPI:IPI00859492
Ensembl:ENSDART00000098259 OMA:REKINTH Uniprot:E7F4H0
Length = 646
Score = 97 (39.2 bits), Expect = 0.00060, P = 0.00060
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 107 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 153
>UNIPROTKB|J9NTT7 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:EKINTNC EMBL:AAEX03012928
Ensembl:ENSCAFT00000044767 Uniprot:J9NTT7
Length = 659
Score = 97 (39.2 bits), Expect = 0.00061, P = 0.00061
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 EKKRRDQFNMLINELCTMVSTNN---RKMDKSTVLKSTIAFLKNYNG 79
EK+RRD+ N I+EL ++V T N RK+DK TVL+ + +K G
Sbjct: 113 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 159
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.134 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 96 73 0.00091 102 3 11 22 0.41 28
29 0.45 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 485 (52 KB)
Total size of DFA: 90 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.86u 0.08s 8.94t Elapsed: 00:00:07
Total cpu time: 8.86u 0.08s 8.94t Elapsed: 00:00:07
Start: Thu Aug 15 11:08:51 2013 End: Thu Aug 15 11:08:58 2013