BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy3611
         (472 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|91078814|ref|XP_970649.1| PREDICTED: similar to ran gtpase-activating protein [Tribolium
           castaneum]
 gi|270003723|gb|EFA00171.1| hypothetical protein TcasGA2_TC002993 [Tribolium castaneum]
          Length = 534

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 159/239 (66%), Positives = 189/239 (79%), Gaps = 1/239 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GARL ELD+SDNAFGPIGVEGLA LLRSS C+ALEEL+LNNNGLGITG KLL+ AL DCY
Sbjct: 111 GARLTELDMSDNAFGPIGVEGLAALLRSSSCYALEELRLNNNGLGITGGKLLASALTDCY 170

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            SSK+ G PL LKVFIAGRNRLENEGAK LA VFK + TLE + MPQNGIYHVGI+ALS+
Sbjct: 171 NSSKETGKPLQLKVFIAGRNRLENEGAKALAEVFKMIGTLEEIAMPQNGIYHVGISALSE 230

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           AF +NKNL+ LNLNDNTI  KGA  + +AL  L  L  +N GDCLLK+AGA S+A  L T
Sbjct: 231 AFTQNKNLQILNLNDNTIGEKGAEAIAKALPHLQQLKEINFGDCLLKTAGAISLANVLKT 290

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
            +  LE++ L  NEI ++GGL LVKAM NK+KLK +N++ NQFGE+G +++E  +K  G
Sbjct: 291 GHANLEELTLGHNEIRLKGGLQLVKAMANKSKLKVLNLNGNQFGEDGRKQIETEIKQIG 349



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/150 (56%), Positives = 110/150 (73%), Gaps = 1/150 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA VFK + TLE + MPQNGIYHVGI+ALS+AF +NK L+ LNLNDNTI  KGA  + +A
Sbjct: 200 LAEVFKMIGTLEEIAMPQNGIYHVGISALSEAFTQNKNLQILNLNDNTIGEKGAEAIAKA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  L  +N GDCLLK+AGA S+A  L T +  LE++ L  NEI ++GGL LVKAM N
Sbjct: 260 LPHLQQLKEINFGDCLLKTAGAISLANVLKTGHANLEELTLGHNEIRLKGGLQLVKAMAN 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFG 150
           K+KLK +N++ NQFGE+G +++E  +K  G
Sbjct: 320 KSKLKVLNLNGNQFGEDGRKQIETEIKQIG 349


>gi|322796742|gb|EFZ19175.1| hypothetical protein SINV_13014 [Solenopsis invicta]
          Length = 553

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 139/246 (56%), Positives = 178/246 (72%), Gaps = 3/246 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G++L ELDLSDNAFGPIG++GLA+LL SS C+AL++LKLNNNGLGI+G K+L+KAL  C+
Sbjct: 75  GSQLTELDLSDNAFGPIGIQGLANLLASSPCYALQQLKLNNNGLGISGGKMLAKALEKCH 134

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           E+S KEG+PLALKVFI GRNRLENEGA+ LA+VF+KLKTLE V M QNGIYHVGI A++ 
Sbjct: 135 ENSSKEGTPLALKVFIVGRNRLENEGAQALASVFEKLKTLEEVVMQQNGIYHVGIAAIAQ 194

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT- 402
               N NLR LNLNDNTI  KGA  L + L     L  LNLGDCLLK+ GA ++A+ L  
Sbjct: 195 GLSANPNLRVLNLNDNTIGLKGARALAKVLPIFRGLEELNLGDCLLKTKGALALAEALEI 254

Query: 403 --DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
             ++T+L  ++L+CNE+    G  + KA  +KT L  + +  N FG EG E + +++   
Sbjct: 255 HGNHTSLRYLDLSCNELRAPAGNAIAKATHDKTLLTNLQLDGNCFGTEGRENLREILAKL 314

Query: 461 GMAAAL 466
           G   AL
Sbjct: 315 GRLDAL 320



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 97/157 (61%), Gaps = 3/157 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+VF+KLKTLE V M QNGIYHVGI A++     N  LR LNLNDNTI  KGA  L + 
Sbjct: 164 LASVFEKLKTLEEVVMQQNGIYHVGIAAIAQGLSANPNLRVLNLNDNTIGLKGARALAKV 223

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT---DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L     L  LNLGDCLLK+ GA ++A+ L    ++T+L  ++L+CNE+    G  + KA 
Sbjct: 224 LPIFRGLEELNLGDCLLKTKGALALAEALEIHGNHTSLRYLDLSCNELRAPAGNAIAKAT 283

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
            +KT L  + +  N FG EG E + +++   G   AL
Sbjct: 284 HDKTLLTNLQLDGNCFGTEGRENLREILAKLGRLDAL 320


>gi|405976660|gb|EKC41159.1| Ran GTPase-activating protein 1 [Crassostrea gigas]
          Length = 517

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 138/254 (54%), Positives = 188/254 (74%), Gaps = 2/254 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +K GA LV LDLSDNAFGP G+ GL  LL+SS C+ L+EL+LNNNGLGITG K+L++ L 
Sbjct: 57  MKAGAGLVVLDLSDNAFGPNGIVGLVALLKSSSCYTLQELRLNNNGLGITGGKVLAECLT 116

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+++S K G PL LKVF++GRNRLEN GA  LAAVFK L +LE V MPQNGIY  GITA
Sbjct: 117 ECHQNSVKAGKPLKLKVFVSGRNRLENPGATALAAVFKALGSLEEVAMPQNGIYAEGITA 176

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L++AF ENKNLR +NL+DNT T KGA  + + L KL +L ++N GDCL+++ GA +I + 
Sbjct: 177 LAEAFAENKNLRVMNLSDNTFTQKGAKNMAKVLPKLQNLEVINYGDCLVRTEGAIAITEA 236

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L + +  L+++NL+ +EI  +G + +V+ MKNK  LK+++++ N FGE G EE+++ MK+
Sbjct: 237 LKEGHQKLKELNLSGSEIHKRGAIAVVENMKNKPNLKKLDLNCNMFGESGKEEIKEAMKN 296

Query: 460 FGMAAALV-LEDDE 472
            G    L  L DDE
Sbjct: 297 NGKLDILASLSDDE 310



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 131/206 (63%), Gaps = 16/206 (7%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAAVFK L +LE V MPQNGIY  GITAL++AF ENK LR +NL+DNT T KGA  + + 
Sbjct: 149 LAAVFKALGSLEEVAMPQNGIYAEGITALAEAFAENKNLRVMNLSDNTFTQKGAKNMAKV 208

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KL +L ++N GDCL+++ GA +I + L + +  L+++NL+ +EI  +G + +V+ MKN
Sbjct: 209 LPKLQNLEVINYGDCLVRTEGAIAITEALKEGHQKLKELNLSGSEIHKRGAIAVVENMKN 268

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDDEG-------------ECSD 166
           K  LK+++++ N FGE G EE+++ MK+ G    L  L DDEG             E  D
Sbjct: 269 KPNLKKLDLNCNMFGESGKEEIKEAMKNNGKLDILASLSDDEGSDEEEVDEGDDQGEEED 328

Query: 167 EEQDE-ESEEENDSDAEGDNSNLSHN 191
             QD+ E EE ND + +    ++S N
Sbjct: 329 VGQDDVEGEEVNDPELQVKGKSISPN 354



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 13/137 (9%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS----------KLPSLA 69
           NGI  VG+ AL  +      L+ L LN+N +   G   L + L+          K   L 
Sbjct: 76  NGI--VGLVALLKS-SSCYTLQELRLNNNGLGITGGKVLAECLTECHQNSVKAGKPLKLK 132

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           +   G   L++ GA+++A       +LE+V +  N I  +G   L +A      L+ +N+
Sbjct: 133 VFVSGRNRLENPGATALAAVFKALGSLEEVAMPQNGIYAEGITALAEAFAENKNLRVMNL 192

Query: 130 SENQFGEEGVEEMEKLM 146
           S+N F ++G + M K++
Sbjct: 193 SDNTFTQKGAKNMAKVL 209


>gi|332019511|gb|EGI59990.1| Ran GTPase-activating protein 1 [Acromyrmex echinatior]
          Length = 583

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 135/236 (57%), Positives = 174/236 (73%), Gaps = 3/236 (1%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           ++L ELDLSDNAFGPIG+EGLA+LL SS C+ L++LKLNNNGLGI+G K+L+KAL  CYE
Sbjct: 111 SQLTELDLSDNAFGPIGIEGLANLLASSPCYTLQQLKLNNNGLGISGGKMLAKALEKCYE 170

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           +S  EG+P ALKVFI GRNRLENEGA+ LA+VF++LKTLE V M QNGIYHVGI A++  
Sbjct: 171 NSSSEGTPFALKVFIVGRNRLENEGAQALASVFERLKTLEEVVMQQNGIYHVGIAAIAKG 230

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
              N NLR LNLNDNTI  KGA  L +AL     L  LNLGDCLLK+ GA  IA+ L   
Sbjct: 231 LSVNPNLRVLNLNDNTIGLKGAKALAKALPTFRGLEELNLGDCLLKTKGALVIAEALQIH 290

Query: 403 -DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            ++T+L +++L+ NE+ +  G  + KAM +KT L  + +  N FG EG E++ +++
Sbjct: 291 GNHTSLRNLDLSNNELRMDAGNAIAKAMHDKTLLTNLELDGNCFGTEGREKLRQIL 346



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 97/148 (65%), Gaps = 3/148 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+VF++LKTLE V M QNGIYHVGI A++     N  LR LNLNDNTI  KGA  L +A
Sbjct: 199 LASVFERLKTLEEVVMQQNGIYHVGIAAIAKGLSVNPNLRVLNLNDNTIGLKGAKALAKA 258

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT---DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L     L  LNLGDCLLK+ GA  IA+ L    ++T+L +++L+ NE+ +  G  + KAM
Sbjct: 259 LPTFRGLEELNLGDCLLKTKGALVIAEALQIHGNHTSLRNLDLSNNELRMDAGNAIAKAM 318

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLM 146
            +KT L  + +  N FG EG E++ +++
Sbjct: 319 HDKTLLTNLELDGNCFGTEGREKLRQIL 346


>gi|158296865|ref|XP_001689011.1| AGAP008267-PA [Anopheles gambiae str. PEST]
 gi|157014917|gb|EDO63574.1| AGAP008267-PA [Anopheles gambiae str. PEST]
          Length = 598

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 138/252 (54%), Positives = 178/252 (70%), Gaps = 1/252 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L  LD SDNA GP G+ GL DLL+S+ C+ LE+LKLNN GLGI G  +L+KAL 
Sbjct: 106 ITAGAQLTVLDCSDNALGPNGMVGLVDLLKSATCYTLEQLKLNNCGLGIEGGTMLAKALL 165

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           + + +S+K G PLALKVFIAGRNRLEN GAK L+ +F  + TLE++EMPQNGIYHVGITA
Sbjct: 166 EGHTASRKVGKPLALKVFIAGRNRLENAGAKALSEMFATVGTLEQIEMPQNGIYHVGITA 225

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LSDAF  N+NLR LNLNDNTI  KGA  L  A+  L  L  +N GDCLLK+ GA  I + 
Sbjct: 226 LSDAFRVNRNLRILNLNDNTIGPKGAAALSVAVQDLHHLREINFGDCLLKTKGAVLIGEA 285

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L   +T LE ++   NEI   GG  LV A  NK +L+ + ++ NQFG+E  E+M++LM++
Sbjct: 286 LHQAHTELEVMDFGYNEIGPDGGFALVNASANKGRLRSLVLNGNQFGDECCEQMKELMRT 345

Query: 460 FGMAAALVLEDD 471
           +    A+ LE+D
Sbjct: 346 YERDRAMELEED 357



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/160 (50%), Positives = 106/160 (66%), Gaps = 1/160 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+ +F  + TLE +EMPQNGIYHVGITALSDAF  N+ LR LNLNDNTI  KGA  L  A
Sbjct: 198 LSEMFATVGTLEQIEMPQNGIYHVGITALSDAFRVNRNLRILNLNDNTIGPKGAAALSVA 257

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L  +N GDCLLK+ GA  I + L   +T LE ++   NEI   GG  LV A  N
Sbjct: 258 VQDLHHLREINFGDCLLKTKGAVLIGEALHQAHTELEVMDFGYNEIGPDGGFALVNASAN 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
           K +L+ + ++ NQFG+E  E+M++LM+++    A+ LE+D
Sbjct: 318 KGRLRSLVLNGNQFGDECCEQMKELMRTYERDRAMELEED 357


>gi|156555416|ref|XP_001605648.1| PREDICTED: ran GTPase-activating protein 1-like [Nasonia
           vitripennis]
          Length = 587

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 135/230 (58%), Positives = 166/230 (72%), Gaps = 4/230 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G +LVELDLSDNAFGPIGV+GLADLLRSS C+ L+EL+LNNNGLGITG K+L+KAL DC+
Sbjct: 114 GTQLVELDLSDNAFGPIGVKGLADLLRSSSCYTLKELRLNNNGLGITGGKMLAKALMDCH 173

Query: 284 ESSKKEGS-PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            +S ++ S P  LKVFIAGRNRLENEGA  LA VF+ L +LE V MPQNGIYHVGI+AL+
Sbjct: 174 NNSMRDTSKPFGLKVFIAGRNRLENEGATALAEVFRTLTSLEEVVMPQNGIYHVGISALA 233

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +    N+ LR LNLNDNT+  KGA  L   L     L  LNLGDCLLK+ GA  +A  L 
Sbjct: 234 NGLSVNQGLRILNLNDNTVGPKGAQALADVLHNFSCLERLNLGDCLLKTRGAVVLADALG 293

Query: 403 DN---TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            N    +L ++NL+ NEI ++G   +  AM +KT+L  + +  N FGEEG
Sbjct: 294 INGNHPSLTELNLSFNEIKIRGAGSIADAMADKTQLTTLILDGNAFGEEG 343



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/140 (49%), Positives = 89/140 (63%), Gaps = 3/140 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA VF+ L +LE V MPQNGIYHVGI+AL++    N+ LR LNLNDNT+  KGA  L   
Sbjct: 204 LAEVFRTLTSLEEVVMPQNGIYHVGISALANGLSVNQGLRILNLNDNTVGPKGAQALADV 263

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN---TTLEDVNLTCNEISVQGGLDLVKAM 118
           L     L  LNLGDCLLK+ GA  +A  L  N    +L ++NL+ NEI ++G   +  AM
Sbjct: 264 LHNFSCLERLNLGDCLLKTRGAVVLADALGINGNHPSLTELNLSFNEIKIRGAGSIADAM 323

Query: 119 KNKTKLKQINVSENQFGEEG 138
            +KT+L  + +  N FGEEG
Sbjct: 324 ADKTQLTTLILDGNAFGEEG 343



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQAL------- 62
           L  +++  N    +G+  L+D    +    L+ L LN+N +   G   L +AL       
Sbjct: 117 LVELDLSDNAFGPIGVKGLADLLRSSSCYTLKELRLNNNGLGITGGKMLAKALMDCHNNS 176

Query: 63  ----SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
               SK   L +   G   L++ GA+++A+     T+LE+V +  N I   G   L   +
Sbjct: 177 MRDTSKPFGLKVFIAGRNRLENEGATALAEVFRTLTSLEEVVMPQNGIYHVGISALANGL 236

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
                L+ +N+++N  G +G + +  ++ +F     L L D
Sbjct: 237 SVNQGLRILNLNDNTVGPKGAQALADVLHNFSCLERLNLGD 277


>gi|427785591|gb|JAA58247.1| Putative ran gtpase activating protein 1 [Rhipicephalus pulchellus]
          Length = 570

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/243 (55%), Positives = 166/243 (68%), Gaps = 1/243 (0%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A L ELDLSDNAFGPIG   L  LL S  CF LE L+LNNNGLG  G + L+KAL  C E
Sbjct: 113 ATLTELDLSDNAFGPIGAGALLPLLSSPVCFQLEVLRLNNNGLGTGGAEFLAKALTKCIE 172

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
            S K G PLAL+  + GRNRLEN GA  + AVF KL TLE V +PQNGIYH GI AL++ 
Sbjct: 173 DSTKAGKPLALRTLVCGRNRLENVGAIAMGAVFGKLHTLEEVALPQNGIYHEGIAALANG 232

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-D 403
              NKNLR LNLNDNT T KGA  + QAL  L +L ++N GDCLLK+AGA  IA  L   
Sbjct: 233 LMSNKNLRILNLNDNTFTVKGARHMAQALRHLDNLEVINFGDCLLKTAGAKEIANSLKHG 292

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 463
           +  L++VNL  NEI+++GGL++V+A+K K  L+ + +  N+FG EGV  +E +M++ G  
Sbjct: 293 HNALKEVNLGNNEIALEGGLEIVEALKGKPDLETLELDGNKFGPEGVNTLEAVMEAVGKI 352

Query: 464 AAL 466
            AL
Sbjct: 353 EAL 355



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 79/155 (50%), Positives = 106/155 (68%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + AVF KL TLE V +PQNGIYH GI AL++    NK LR LNLNDNT T KGA  + QA
Sbjct: 201 MGAVFGKLHTLEEVALPQNGIYHEGIAALANGLMSNKNLRILNLNDNTFTVKGARHMAQA 260

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L +L ++N GDCLLK+AGA  IA  L   +  L++VNL  NEI+++GGL++V+A+K 
Sbjct: 261 LRHLDNLEVINFGDCLLKTAGAKEIANSLKHGHNALKEVNLGNNEIALEGGLEIVEALKG 320

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K  L+ + +  N+FG EGV  +E +M++ G   AL
Sbjct: 321 KPDLETLELDGNKFGPEGVNTLEAVMEAVGKIEAL 355



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 19/219 (8%)

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE-NEGAKM 312
           C  LE L L  N LG+   K + KAL  C    +        K    GR R E  +  + 
Sbjct: 49  CPKLEMLCLEGNTLGVDAAKAIGKALESCPNLKRA-----LWKDLFTGRLRTEIPDAVRF 103

Query: 313 LAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKGAIPL 369
           L++     K TL  +++  N    +G  AL           L  L LN+N +   GA  L
Sbjct: 104 LSSGMLLAKATLTELDLSDNAFGPIGAGALLPLLSSPVCFQLEVLRLNNNGLGTGGAEFL 163

Query: 370 GQALSKL---------P-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            +AL+K          P +L  L  G   L++ GA ++        TLE+V L  N I  
Sbjct: 164 AKALTKCIEDSTKAGKPLALRTLVCGRNRLENVGAIAMGAVFGKLHTLEEVALPQNGIYH 223

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +G   L   + +   L+ +N+++N F  +G   M + ++
Sbjct: 224 EGIAALANGLMSNKNLRILNLNDNTFTVKGARHMAQALR 262


>gi|296486973|tpg|DAA29086.1| TPA: chondroadherin-like [Bos taurus]
          Length = 585

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAIAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI  +  L + +A+ +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 288 IHGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MAA L
Sbjct: 348 FNMAAVL 354



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 103/155 (66%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI  +  L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAIAIADAIHGGLPKLKELNLSFGEIKREAALSVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E+++++++ F MAA L
Sbjct: 320 KTELEKLDLNGNMLGEEGCEQLQEVLEGFNMAAVL 354


>gi|158519829|ref|NP_001103559.1| ran GTPase-activating protein 1 [Bos taurus]
 gi|158262606|gb|AAI54379.1| Ran GTPase activating protein 1 [Bos taurus]
          Length = 585

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAIAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI  +  L + +A+ +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 288 IHGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MAA L
Sbjct: 348 FNMAAVL 354



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 103/155 (66%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI  +  L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAIAIADAIHGGLPKLKELNLSFGEIKREAALSVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E+++++++ F MAA L
Sbjct: 320 KTELEKLDLNGNMLGEEGCEQLQEVLEGFNMAAVL 354


>gi|440893622|gb|ELR46319.1| Ran GTPase-activating protein 1, partial [Bos grunniens mutus]
          Length = 640

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 164 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 223

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 224 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 283

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 284 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAIAIADA 343

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI  +  L + +A+ +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 344 IHGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEEGCEQLQEVLEG 403

Query: 460 FGMAAAL 466
           F MAA L
Sbjct: 404 FNMAAVL 410



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 103/155 (66%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 256 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 315

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI  +  L + +A+ +
Sbjct: 316 LKTLRQVEVINFGDCLVRSKGAIAIADAIHGGLPKLKELNLSFGEIKREAALSVAEAVAD 375

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E+++++++ F MAA L
Sbjct: 376 KTELEKLDLNGNMLGEEGCEQLQEVLEGFNMAAVL 410



 Score = 38.1 bits (87), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%)

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
           +L +   G   L++ GA+++A+      TLE+V++  N I+  G   L +A      L+ 
Sbjct: 237 ALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRV 296

Query: 127 INVSENQFGEEGVEEMEKLMKSF 149
           IN+++N F E+G   M K +K+ 
Sbjct: 297 INLNDNTFTEKGAVAMAKTLKTL 319


>gi|426225822|ref|XP_004007060.1| PREDICTED: ran GTPase-activating protein 1 [Ovis aries]
          Length = 581

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 124/247 (50%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  L+ +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLQVINLNDNTFTEKGAVAMAKTLRALRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI  +  L + +A+ +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 288 IRGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MAA L
Sbjct: 348 FNMAAVL 354



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 103/155 (66%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  L+ +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLQVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI  +  L + +A+ +
Sbjct: 260 LRALRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFGEIKREAALSVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E+++++++ F MAA L
Sbjct: 320 KTELEKLDLNGNMLGEEGCEQLQEVLEGFNMAAVL 354


>gi|312385248|gb|EFR29797.1| hypothetical protein AND_01001 [Anopheles darlingi]
          Length = 585

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/247 (54%), Positives = 171/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L  LD SDNA GP G+ GL DLL+S+ C++L+ELKLNN GLGI G  +L+KAL 
Sbjct: 107 ITAGAQLTVLDCSDNALGPNGMVGLVDLLKSATCYSLKELKLNNCGLGIEGGTMLAKALL 166

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           + +  SK  G PLALKVFIAGRNRLEN GAK L+ +F  + TLE++EMPQNGIYH GITA
Sbjct: 167 EGHAGSKATGKPLALKVFIAGRNRLENAGAKALSEMFATIGTLEQIEMPQNGIYHPGITA 226

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS+AF+ N NLR LNLNDNTI  +GA  L  AL  L  L  +N GDCLLK+ GA  I + 
Sbjct: 227 LSEAFKGNPNLRILNLNDNTIGPRGAAALADALVYLQQLREINFGDCLLKTRGALLIGEA 286

Query: 401 L-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L  ++  +E ++   NEI  +GGL LV A  NK +L+ I ++ N FG+E  E+M +LM  
Sbjct: 287 LHEEHLQIELLDFGFNEIGPEGGLALVNAAANKERLRSIVLNGNAFGDECCEQMIELMDD 346

Query: 460 FGMAAAL 466
           +G A A 
Sbjct: 347 YGRADAF 353



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+ +F  + TLE +EMPQNGIYH GITALS+AF+ N  LR LNLNDNTI  +GA  L  A
Sbjct: 199 LSEMFATIGTLEQIEMPQNGIYHPGITALSEAFKGNPNLRILNLNDNTIGPRGAAALADA 258

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  L  +N GDCLLK+ GA  I + L  ++  +E ++   NEI  +GGL LV A  N
Sbjct: 259 LVYLQQLREINFGDCLLKTRGALLIGEALHEEHLQIELLDFGFNEIGPEGGLALVNAAAN 318

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L+ I ++ N FG+E  E+M +LM  +G A A 
Sbjct: 319 KERLRSIVLNGNAFGDECCEQMIELMDDYGRADAF 353


>gi|328790127|ref|XP_395378.4| PREDICTED: ran GTPase-activating protein 1-like [Apis mellifera]
          Length = 598

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/254 (53%), Positives = 174/254 (68%), Gaps = 5/254 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L ELDLSDNAFGPIG+EGLA+ L SS C+ L  L+L+NNGLGI+G K+L+KAL DCY
Sbjct: 114 GTHLFELDLSDNAFGPIGIEGLANFLTSSSCYTLRVLRLDNNGLGISGGKMLAKALLDCY 173

Query: 284 ESSKKEGSP-LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            +S + GSP LALKVF+AGRNRLENEGAK LA+VF+KL +LE V MPQNGIYH GITAL+
Sbjct: 174 NNSFEAGSPPLALKVFVAGRNRLENEGAKALASVFQKLTSLEEVAMPQNGIYHEGITALA 233

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           +    N  LR LNLNDNT+  KGA  + +AL    +L  LNLGDCLLK+ G+  +A+ L 
Sbjct: 234 NGLSYNPGLRILNLNDNTVGLKGAQAIAKALPNFKNLEQLNLGDCLLKTRGSMVLAEALG 293

Query: 402 --TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMK 458
                 +L ++NL+ NEI  +G   +  AM +K  L  + +  N FG+EG   + + L  
Sbjct: 294 VEGSYPSLTELNLSYNEIKTKGANPIALAMADKKHLATLQLDGNNFGKEGCTILRDSLTI 353

Query: 459 SFGMAAALVLEDDE 472
           S  + +   L+DDE
Sbjct: 354 SERIGSLSTLDDDE 367



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 100/164 (60%), Gaps = 4/164 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+VF+KL +LE V MPQNGIYH GITAL++    N  LR LNLNDNT+  KGA  + +A
Sbjct: 204 LASVFQKLTSLEEVAMPQNGIYHEGITALANGLSYNPGLRILNLNDNTVGLKGAQAIAKA 263

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L    +L  LNLGDCLLK+ G+  +A+ L       +L ++NL+ NEI  +G   +  AM
Sbjct: 264 LPNFKNLEQLNLGDCLLKTRGSMVLAEALGVEGSYPSLTELNLSYNEIKTKGANPIALAM 323

Query: 119 KNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDE 161
            +K  L  + +  N FG+EG   + + L  S  + +   L+DDE
Sbjct: 324 ADKKHLATLQLDGNNFGKEGCTILRDSLTISERIGSLSTLDDDE 367


>gi|197100783|ref|NP_001127649.1| ran GTPase-activating protein 1 [Pongo abelii]
 gi|55733181|emb|CAH93274.1| hypothetical protein [Pongo abelii]
          Length = 592

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 124/247 (50%), Positives = 171/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS C  L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACLTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMSDKAELEKLDLNGNTLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMSD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354


>gi|410902027|ref|XP_003964496.1| PREDICTED: ran GTPase-activating protein 1-like [Takifugu rubripes]
          Length = 576

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 120/244 (49%), Positives = 179/244 (73%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GARL  LDLSDNAFGP GV+G+  LL+SS C+ L+EL+LNN G+G+ G K+L+ +L +CY
Sbjct: 111 GARLTILDLSDNAFGPDGVKGIEKLLKSSACYTLQELRLNNCGMGVGGGKILAASLVECY 170

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           E S KEG+PL+LKVF+AGRNRLEN+GA  LA  F+ + +LE V MPQNGI + GITAL+ 
Sbjct: 171 EKSSKEGAPLSLKVFVAGRNRLENDGATALAQAFQMMGSLEEVHMPQNGINYPGITALAK 230

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A + N  LR LNLNDNT T KGA+ + QAL  L S+ ++N GDCL++ +GA +IA+ +++
Sbjct: 231 AMQHNTGLRILNLNDNTFTEKGAVAMAQALKYLNSIQVINFGDCLVRPSGAVAIAESISE 290

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
               L+++NL+  EI+ +  L++ +A+K+K++L++++++ N  G +G + +   ++S  M
Sbjct: 291 GQPILKELNLSFGEITEEAALEVARAIKDKSQLEKLDLNGNCLGVDGCKALIDSLESMNM 350

Query: 463 AAAL 466
           A  L
Sbjct: 351 AEVL 354



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 106/155 (68%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + +LE V MPQNGI + GITAL+ A + N  LR LNLNDNT T KGA+ + QA
Sbjct: 200 LAQAFQMMGSLEEVHMPQNGINYPGITALAKAMQHNTGLRILNLNDNTFTEKGAVAMAQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L S+ ++N GDCL++ +GA +IA+ +++    L+++NL+  EI+ +  L++ +A+K+
Sbjct: 260 LKYLNSIQVINFGDCLVRPSGAVAIAESISEGQPILKELNLSFGEITEEAALEVARAIKD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K++L++++++ N  G +G + +   ++S  MA  L
Sbjct: 320 KSQLEKLDLNGNCLGVDGCKALIDSLESMNMAEVL 354



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 48/81 (59%)

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
           SL +   G   L++ GA+++A+      +LE+V++  N I+  G   L KAM++ T L+ 
Sbjct: 181 SLKVFVAGRNRLENDGATALAQAFQMMGSLEEVHMPQNGINYPGITALAKAMQHNTGLRI 240

Query: 127 INVSENQFGEEGVEEMEKLMK 147
           +N+++N F E+G   M + +K
Sbjct: 241 LNLNDNTFTEKGAVAMAQALK 261


>gi|242019857|ref|XP_002430375.1| Ran GTPase-activating protein, putative [Pediculus humanus
           corporis]
 gi|212515499|gb|EEB17637.1| Ran GTPase-activating protein, putative [Pediculus humanus
           corporis]
          Length = 588

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 131/250 (52%), Positives = 177/250 (70%), Gaps = 2/250 (0%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A+L ELDLSDNAFGPIGV GL  LL S  C+ L+ LKLNNNGLGI+G K+L+KAL  C++
Sbjct: 103 AQLTELDLSDNAFGPIGVSGLGSLLSSPACYQLQVLKLNNNGLGISGGKMLAKALLKCHK 162

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           +S K+G  L+LK+   GRNRLEN GA  LA VF+ L +LE + M QNGIYH GI ALS++
Sbjct: 163 NSSKDGKALSLKLIQIGRNRLENAGAVALAEVFQTLGSLEEISMYQNGIYHEGIKALSES 222

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD- 403
           F++N NLR ++LNDNTIT KGA  +  AL  L  L +LN  DCLL++ GA+ +A  LT+ 
Sbjct: 223 FKKNSNLRLIDLNDNTITLKGAKHIANALPHLQKLKVLNFDDCLLRTDGATVLADALTEK 282

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 462
           +  LE++ L  NEI ++ GL + KA+KNK+++K++NV+ NQFG  G  ++ E+L K   +
Sbjct: 283 HMNLEELYLGNNEIRIESGLAIAKAIKNKSQMKKLNVNGNQFGSVGTTKLKEELTKMEKI 342

Query: 463 AAALVLEDDE 472
                + DDE
Sbjct: 343 QVLETMSDDE 352



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/179 (44%), Positives = 118/179 (65%), Gaps = 5/179 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA VF+ L +LE + M QNGIYH GI ALS++F++N  LR ++LNDNTIT KGA  +  A
Sbjct: 191 LAEVFQTLGSLEEISMYQNGIYHEGIKALSESFKKNSNLRLIDLNDNTITLKGAKHIANA 250

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  L +LN  DCLL++ GA+ +A  LT+ +  LE++ L  NEI ++ GL + KA+KN
Sbjct: 251 LPHLQKLKVLNFDDCLLRTDGATVLADALTEKHMNLEELYLGNNEIRIESGLAIAKAIKN 310

Query: 121 KTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDE---GECSDEEQDEESEE 175
           K+++K++NV+ NQFG  G  ++ E+L K   +     + DDE   G+  DE +D E+ +
Sbjct: 311 KSQMKKLNVNGNQFGSVGTTKLKEELTKMEKIQVLETMSDDESFNGDDDDENRDSENSQ 369


>gi|288557286|ref|NP_001165668.1| ran GTPase-activating protein 1 [Xenopus laevis]
 gi|117558143|gb|AAI26017.1| Unknown (protein for MGC:154793) [Xenopus laevis]
          Length = 585

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 121/244 (49%), Positives = 174/244 (71%), Gaps = 1/244 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L ELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLTELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C++ S   G PLALKVFIAGRNRLEN+GA  L+  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHKKSSAHGKPLALKVFIAGRNRLENDGATALSEAFRLIGTLEEVHMPQNGINHAGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+++F+ N  L+ +NLNDNT T KG + + +AL  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAESFKANSLLKVINLNDNTFTEKGGVAMAEALKTLRQVEVINFGDCLVRSKGAQAIASA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L+D+NL+  EI     + LV+++++K+ L++++++ N  GEEG E+++++++S
Sbjct: 288 LKEGLHKLKDLNLSYCEIKADAAVSLVESVEDKSDLEKLDLNGNCLGEEGCEQVQEILES 347

Query: 460 FGMA 463
             MA
Sbjct: 348 INMA 351



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 105/152 (69%), Gaps = 1/152 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  F+ + TLE V MPQNGI H GITAL+++F+ N  L+ +NLNDNT T KG + + +A
Sbjct: 200 LSEAFRLIGTLEEVHMPQNGINHAGITALAESFKANSLLKVINLNDNTFTEKGGVAMAEA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  L +    L+D+NL+  EI     + LV+++++
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAQAIASALKEGLHKLKDLNLSYCEIKADAAVSLVESVED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           K+ L++++++ N  GEEG E+++++++S  MA
Sbjct: 320 KSDLEKLDLNGNCLGEEGCEQVQEILESINMA 351


>gi|157117093|ref|XP_001658696.1| ran gtpase-activating protein [Aedes aegypti]
 gi|108876187|gb|EAT40412.1| AAEL007858-PA [Aedes aegypti]
          Length = 583

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/247 (53%), Positives = 171/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L  LD SDNA GP G+ GL DLL+S+ C+ L+ELKLNN GLGI G K+LSKAL 
Sbjct: 107 IAAGAQLTVLDCSDNALGPNGMTGLVDLLKSATCYTLQELKLNNCGLGIGGGKMLSKALL 166

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C+ +S + G PL+LKVFIAGRNRLEN+GAK LA VF K++TLE +EMPQNGIYHVGITA
Sbjct: 167 ACHAASSELGKPLSLKVFIAGRNRLENDGAKALAEVFGKVRTLEHIEMPQNGIYHVGITA 226

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS+AF+EN NL+ LNLNDNTI  KGA  +  A+  L  L  +N GDCLLK+ GA  + + 
Sbjct: 227 LSEAFKENGNLKVLNLNDNTIGPKGAAAIADAIYDLQCLREINFGDCLLKTKGAMLLGEA 286

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L + +T +E +N   NEI  +GG  +  A  NK  LK + +  NQFG E  E++ + +  
Sbjct: 287 LQEAHTDIEVLNFGFNEIGPEGGFAIANATYNKDNLKSLILDGNQFGYECREQLRETLTQ 346

Query: 460 FGMAAAL 466
           +    AL
Sbjct: 347 YDRLEAL 353



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA VF K++TLEH+EMPQNGIYHVGITALS+AF+EN  L+ LNLNDNTI  KGA  +  A
Sbjct: 199 LAEVFGKVRTLEHIEMPQNGIYHVGITALSEAFKENGNLKVLNLNDNTIGPKGAAAIADA 258

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L  +N GDCLLK+ GA  + + L + +T +E +N   NEI  +GG  +  A  N
Sbjct: 259 IYDLQCLREINFGDCLLKTKGAMLLGEALQEAHTDIEVLNFGFNEIGPEGGFAIANATYN 318

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K  LK + +  NQFG E  E++ + +  +    AL
Sbjct: 319 KDNLKSLILDGNQFGYECREQLRETLTQYDRLEAL 353


>gi|380018240|ref|XP_003693041.1| PREDICTED: LOW QUALITY PROTEIN: ran GTPase-activating protein
           1-like [Apis florea]
          Length = 598

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/230 (55%), Positives = 163/230 (70%), Gaps = 4/230 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L ELDLSDNAFGPIG+EGLA+ L SS C+ L  L+L+NNGLGI+G K+L+KAL DCY
Sbjct: 114 GTHLFELDLSDNAFGPIGIEGLANFLTSSSCYTLRVLRLDNNGLGISGGKMLAKALLDCY 173

Query: 284 ESSKKEGSP-LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            +S + GSP LALKVF+AGRNRLENEGAK LA+VF+KL +LE V MPQNGIY+ GITAL+
Sbjct: 174 NNSFEAGSPPLALKVFVAGRNRLENEGAKALASVFQKLTSLEEVAMPQNGIYYEGITALA 233

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           +    N  LR LNLNDNT+  KGA  + +AL    +L  LNLGDCLLK+ G+  +A+ L 
Sbjct: 234 NGLSHNPGLRILNLNDNTVGLKGAQAIAKALPXFKNLEQLNLGDCLLKTQGSMVLAEALG 293

Query: 402 --TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
                 +L ++NL+ NEI  +G   +  AM +K  L  + +  N FG+EG
Sbjct: 294 VEGSYPSLTELNLSYNEIKTKGANPIALAMADKKHLVTLQLDGNNFGKEG 343



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/140 (46%), Positives = 89/140 (63%), Gaps = 3/140 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+VF+KL +LE V MPQNGIY+ GITAL++    N  LR LNLNDNT+  KGA  + +A
Sbjct: 204 LASVFQKLTSLEEVAMPQNGIYYEGITALANGLSHNPGLRILNLNDNTVGLKGAQAIAKA 263

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L    +L  LNLGDCLLK+ G+  +A+ L       +L ++NL+ NEI  +G   +  AM
Sbjct: 264 LPXFKNLEQLNLGDCLLKTQGSMVLAEALGVEGSYPSLTELNLSYNEIKTKGANPIALAM 323

Query: 119 KNKTKLKQINVSENQFGEEG 138
            +K  L  + +  N FG+EG
Sbjct: 324 ADKKHLVTLQLDGNNFGKEG 343


>gi|350396997|ref|XP_003484734.1| PREDICTED: ran GTPase-activating protein 1-like [Bombus impatiens]
          Length = 595

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 128/230 (55%), Positives = 161/230 (70%), Gaps = 4/230 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G RL ELDLSDNAFGPIG+EGLA+ L SS C+ L  L+LNNNGLGI+G K+L+KAL DCY
Sbjct: 114 GTRLFELDLSDNAFGPIGIEGLANFLTSSSCYTLRVLRLNNNGLGISGGKILAKALLDCY 173

Query: 284 ESSKKEGSP-LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            +S + GSP LALKVF+AGRNRLEN+GAK LA+VF+KL +LE V MPQNGIY+ GI AL+
Sbjct: 174 NNSFQGGSPALALKVFVAGRNRLENDGAKALASVFEKLTSLEEVVMPQNGIYYQGIIALA 233

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           +    N  LR LNLNDNT+  KGA  + +AL    +L  LNLGDCLLK+ GA  +A+ L 
Sbjct: 234 NGLSSNPGLRILNLNDNTVGPKGAQAIAKALPNFQNLEQLNLGDCLLKTQGAVVLAEALG 293

Query: 402 --TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
                  L ++NL+ NEI  +G   +  AM  K +L  + +  N FG+ G
Sbjct: 294 VEGSYPLLAELNLSYNEIRTRGANPIALAMAKKERLVTLQLDGNHFGQTG 343



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 3/140 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+VF+KL +LE V MPQNGIY+ GI AL++    N  LR LNLNDNT+  KGA  + +A
Sbjct: 204 LASVFEKLTSLEEVVMPQNGIYYQGIIALANGLSSNPGLRILNLNDNTVGPKGAQAIAKA 263

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L    +L  LNLGDCLLK+ GA  +A+ L        L ++NL+ NEI  +G   +  AM
Sbjct: 264 LPNFQNLEQLNLGDCLLKTQGAVVLAEALGVEGSYPLLAELNLSYNEIRTRGANPIALAM 323

Query: 119 KNKTKLKQINVSENQFGEEG 138
             K +L  + +  N FG+ G
Sbjct: 324 AKKERLVTLQLDGNHFGQTG 343



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 29/251 (11%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQAL------- 62
           L  +++  N    +GI  L++    +    LR L LN+N +   G   L +AL       
Sbjct: 117 LFELDLSDNAFGPIGIEGLANFLTSSSCYTLRVLRLNNNGLGISGGKILAKALLDCYNNS 176

Query: 63  ----SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
               S   +L +   G   L++ GA ++A      T+LE+V +  N I  QG + L   +
Sbjct: 177 FQGGSPALALKVFVAGRNRLENDGAKALASVFEKLTSLEEVVMPQNGIYYQGIIALANGL 236

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEND 178
            +   L+ +N+++N  G +G + + K + +F     L L    G+C  + Q      E  
Sbjct: 237 SSNPGLRILNLNDNTVGPKGAQAIAKALPNFQNLEQLNL----GDCLLKTQGAVVLAE-A 291

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
              EG    L+  + N S+N               +N   +++    RLV L L  N FG
Sbjct: 292 LGVEGSYPLLA--ELNLSYNEIRTRG---------ANPIALAMAKKERLVTLQLDGNHFG 340

Query: 239 PIGVEGLADLL 249
             G   L D L
Sbjct: 341 QTGRTILRDSL 351


>gi|327272532|ref|XP_003221038.1| PREDICTED: ran GTPase-activating protein 1-like isoform 2 [Anolis
           carolinensis]
          Length = 579

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  G +L ELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGCQLTELDLSDNAFGPDGVRGFEPLLKSPACFTLQELKLNNCGMGIGGGKILAGALK 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G  LALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSVQGKSLALKVFVAGRNRLENDGATALAEAFSVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L KL  + I+N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKKLRQVEIINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +++    L+++NL+  EI     L + +A ++K++L++++++ N FGEEG E+++++++ 
Sbjct: 288 VSEGLHKLKELNLSFCEIKRDAALIIAEATEDKSELEKLDLNGNCFGEEGCEQLQEILEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAEVL 354



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 106/155 (68%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFSVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KL  + I+N GDCL++S GA +IA+ +++    L+++NL+  EI     L + +A ++
Sbjct: 260 LKKLRQVEIINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKRDAALIIAEATED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K++L++++++ N FGEEG E+++++++ F MA  L
Sbjct: 320 KSELEKLDLNGNCFGEEGCEQLQEILEGFNMAEVL 354


>gi|327272530|ref|XP_003221037.1| PREDICTED: ran GTPase-activating protein 1-like isoform 1 [Anolis
           carolinensis]
          Length = 591

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  G +L ELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGCQLTELDLSDNAFGPDGVRGFEPLLKSPACFTLQELKLNNCGMGIGGGKILAGALK 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G  LALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSVQGKSLALKVFVAGRNRLENDGATALAEAFSVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L KL  + I+N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKKLRQVEIINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +++    L+++NL+  EI     L + +A ++K++L++++++ N FGEEG E+++++++ 
Sbjct: 288 VSEGLHKLKELNLSFCEIKRDAALIIAEATEDKSELEKLDLNGNCFGEEGCEQLQEILEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAEVL 354



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 106/155 (68%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFSVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KL  + I+N GDCL++S GA +IA+ +++    L+++NL+  EI     L + +A ++
Sbjct: 260 LKKLRQVEIINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKRDAALIIAEATED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K++L++++++ N FGEEG E+++++++ F MA  L
Sbjct: 320 KSELEKLDLNGNCFGEEGCEQLQEILEGFNMAEVL 354


>gi|327272536|ref|XP_003221040.1| PREDICTED: ran GTPase-activating protein 1-like isoform 4 [Anolis
           carolinensis]
          Length = 591

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  G +L ELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGCQLTELDLSDNAFGPDGVRGFEPLLKSPACFTLQELKLNNCGMGIGGGKILAGALK 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G  LALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSVQGKSLALKVFVAGRNRLENDGATALAEAFSVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L KL  + I+N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKKLRQVEIINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +++    L+++NL+  EI     L + +A ++K++L++++++ N FGEEG E+++++++ 
Sbjct: 288 VSEGLHKLKELNLSFCEIKRDAALIIAEATEDKSELEKLDLNGNCFGEEGCEQLQEILEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAEVL 354



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 106/155 (68%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFSVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KL  + I+N GDCL++S GA +IA+ +++    L+++NL+  EI     L + +A ++
Sbjct: 260 LKKLRQVEIINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKRDAALIIAEATED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K++L++++++ N FGEEG E+++++++ F MA  L
Sbjct: 320 KSELEKLDLNGNCFGEEGCEQLQEILEGFNMAEVL 354


>gi|443704243|gb|ELU01388.1| hypothetical protein CAPTEDRAFT_162509 [Capitella teleta]
          Length = 565

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/234 (51%), Positives = 170/234 (72%), Gaps = 1/234 (0%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A+L+ELDLSDNAFGP G++GL   L+S  CF+L+EL+LNNNGLGITG K+L+ +L +C+ 
Sbjct: 113 AKLIELDLSDNAFGPNGMQGLVVFLKSPSCFSLKELRLNNNGLGITGGKMLAASLLECHT 172

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
            S   G+PLAL+VF++GR RLENEG+  LA  FK + +LE V MPQNGI+H GITAL++A
Sbjct: 173 KSLAAGTPLALRVFVSGRGRLENEGSMRLAEAFKAIGSLEEVRMPQNGIFHEGITALAEA 232

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-D 403
           F  N  L+ L+L+DN  T KGA  + ++L K+  L  +N GDCL+K+ GA ++A  +  +
Sbjct: 233 FAFNPKLKILDLSDNIFTEKGASAMAKSLPKMSVLESMNFGDCLIKTKGAHALAAVIKGN 292

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           N  L+ VNL+ NEI V GG  + +A+KNKT L +++++ NQ G+EGVE +   M
Sbjct: 293 NPLLQRVNLSFNEIEVSGGKAIAEAVKNKTGLIELDLNGNQLGDEGVEVVRGAM 346



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/146 (47%), Positives = 100/146 (68%), Gaps = 1/146 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK + +LE V MPQNGI+H GITAL++AF  N KL+ L+L+DN  T KGA  + ++
Sbjct: 201 LAEAFKAIGSLEEVRMPQNGIFHEGITALAEAFAFNPKLKILDLSDNIFTEKGASAMAKS 260

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L K+  L  +N GDCL+K+ GA ++A  +  +N  L+ VNL+ NEI V GG  + +A+KN
Sbjct: 261 LPKMSVLESMNFGDCLIKTKGAHALAAVIKGNNPLLQRVNLSFNEIEVSGGKAIAEAVKN 320

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLM 146
           KT L +++++ NQ G+EGVE +   M
Sbjct: 321 KTGLIELDLNGNQLGDEGVEVVRGAM 346


>gi|327272534|ref|XP_003221039.1| PREDICTED: ran GTPase-activating protein 1-like isoform 3 [Anolis
           carolinensis]
          Length = 580

 Score =  241 bits (616), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  G +L ELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGCQLTELDLSDNAFGPDGVRGFEPLLKSPACFTLQELKLNNCGMGIGGGKILAGALK 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G  LALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSVQGKSLALKVFVAGRNRLENDGATALAEAFSVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L KL  + I+N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKKLRQVEIINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +++    L+++NL+  EI     L + +A ++K++L++++++ N FGEEG E+++++++ 
Sbjct: 288 VSEGLHKLKELNLSFCEIKRDAALIIAEATEDKSELEKLDLNGNCFGEEGCEQLQEILEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAEVL 354



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 106/155 (68%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFSVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KL  + I+N GDCL++S GA +IA+ +++    L+++NL+  EI     L + +A ++
Sbjct: 260 LKKLRQVEIINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKRDAALIIAEATED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K++L++++++ N FGEEG E+++++++ F MA  L
Sbjct: 320 KSELEKLDLNGNCFGEEGCEQLQEILEGFNMAEVL 354


>gi|3914621|sp|O13066.1|RAGP1_XENLA RecName: Full=Ran GTPase-activating protein 1; Short=RanGAP1
 gi|2062660|gb|AAB62321.1| RanGTPase activating protein [Xenopus laevis]
          Length = 580

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 120/244 (49%), Positives = 173/244 (70%), Gaps = 1/244 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L ELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLTELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C++ S   G PLALKVFIAGRNRLEN+GA  L+  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHKKSSAHGKPLALKVFIAGRNRLENDGATALSEAFRLIGTLEEVHMPQNGINHAGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+++F+ N  L+ +NLNDNT T KG + + +AL  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAESFKANSLLKVINLNDNTFTEKGGVAMAEALKTLRQVEVINFGDCLVRSKGAQAIASA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L+D+NL+  EI     + L +++++K+ L++++++ N  GEEG E+++++++S
Sbjct: 288 LKEGLHKLKDLNLSYCEIKADAAVSLAESVEDKSDLEKLDLNGNCLGEEGCEQVQEILES 347

Query: 460 FGMA 463
             MA
Sbjct: 348 INMA 351



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 104/152 (68%), Gaps = 1/152 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  F+ + TLE V MPQNGI H GITAL+++F+ N  L+ +NLNDNT T KG + + +A
Sbjct: 200 LSEAFRLIGTLEEVHMPQNGINHAGITALAESFKANSLLKVINLNDNTFTEKGGVAMAEA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  L +    L+D+NL+  EI     + L +++++
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAQAIASALKEGLHKLKDLNLSYCEIKADAAVSLAESVED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           K+ L++++++ N  GEEG E+++++++S  MA
Sbjct: 320 KSDLEKLDLNGNCLGEEGCEQVQEILESINMA 351


>gi|297261155|ref|XP_002798410.1| PREDICTED: ran GTPase-activating protein 1 isoform 2 [Macaca
           mulatta]
          Length = 627

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 2/253 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 149 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 208

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H G+TA
Sbjct: 209 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGVTA 268

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 269 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 328

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 329 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKTELEKLDLNGNTLGEEGCEQLQEVLEG 388

Query: 460 FGMAAALV-LEDD 471
           F MA  L  L DD
Sbjct: 389 FNMAKVLASLSDD 401



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 105/161 (65%), Gaps = 2/161 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 241 LAEAFRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 300

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 301 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 360

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDD 160
           KT+L++++++ N  GEEG E+++++++ F MA  L  L DD
Sbjct: 361 KTELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDD 401


>gi|57525383|ref|NP_001006237.1| ran GTPase-activating protein 1 [Gallus gallus]
 gi|53133664|emb|CAG32161.1| hypothetical protein RCJMB04_19c24 [Gallus gallus]
          Length = 580

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 121/247 (48%), Positives = 172/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  C+ L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACYTLQELKLNNCGMGIGGGKILAAALK 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALK+F+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKIFMAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  L+ +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINSLLKVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLVRSKGALAIADA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L+++NL+  EI     L + +A+++K +L++++++ N  GEEG E+++++++ 
Sbjct: 288 LKEGLHKLKELNLSFCEIKRDAALSVAEAIEDKVELEKLDLNGNSLGEEGCEQLQEILEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMATVL 354



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 102/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  L+ +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINSLLKVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  L +    L+++NL+  EI     L + +A+++
Sbjct: 260 LKALRQVEVINFGDCLVRSKGALAIADALKEGLHKLKELNLSFCEIKRDAALSVAEAIED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KVELEKLDLNGNSLGEEGCEQLQEILEGFNMATVL 354


>gi|297261157|ref|XP_001099367.2| PREDICTED: ran GTPase-activating protein 1 isoform 1 [Macaca
           mulatta]
          Length = 641

 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 2/253 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 163 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 222

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H G+TA
Sbjct: 223 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGVTA 282

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 283 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 342

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 343 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKTELEKLDLNGNTLGEEGCEQLQEVLEG 402

Query: 460 FGMAAALV-LEDD 471
           F MA  L  L DD
Sbjct: 403 FNMAKVLASLSDD 415



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 105/161 (65%), Gaps = 2/161 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 255 LAEAFRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 314

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 315 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 374

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDD 160
           KT+L++++++ N  GEEG E+++++++ F MA  L  L DD
Sbjct: 375 KTELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDD 415


>gi|16041122|dbj|BAB69728.1| hypothetical protein [Macaca fascicularis]
          Length = 641

 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 2/253 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 163 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 222

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H G+TA
Sbjct: 223 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGVTA 282

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 283 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 342

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 343 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKTELEKLDLNGNTLGEEGCEQLQEVLEG 402

Query: 460 FGMAAALV-LEDD 471
           F MA  L  L DD
Sbjct: 403 FNMAKVLASLSDD 415



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 105/161 (65%), Gaps = 2/161 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 255 LAEAFRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 314

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 315 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 374

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDD 160
           KT+L++++++ N  GEEG E+++++++ F MA  L  L DD
Sbjct: 375 KTELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDD 415


>gi|326911999|ref|XP_003202342.1| PREDICTED: ran GTPase-activating protein 1-like [Meleagris
           gallopavo]
          Length = 576

 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 121/247 (48%), Positives = 172/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  C+ L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACYTLQELKLNNCGMGIGGGKILAAALK 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALK+F+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKIFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  L+ +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINSLLKVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLVRSKGALAIADA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L+++NL+  EI     L + +A+++K +L++++++ N  GEEG E+++++++ 
Sbjct: 288 LKEGLHKLKELNLSFCEIKRDAALSVAEAIEDKAELEKLDLNGNCLGEEGCEQLQEILEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMATVL 354



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 102/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  L+ +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINSLLKVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  L +    L+++NL+  EI     L + +A+++
Sbjct: 260 LKALRQVEVINFGDCLVRSKGALAIADALKEGLHKLKELNLSFCEIKRDAALSVAEAIED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KAELEKLDLNGNCLGEEGCEQLQEILEGFNMATVL 354


>gi|340716605|ref|XP_003396787.1| PREDICTED: LOW QUALITY PROTEIN: ran GTPase-activating protein
           1-like [Bombus terrestris]
          Length = 594

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/254 (52%), Positives = 171/254 (67%), Gaps = 5/254 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G RL ELDLSDNAFGPIG+EGLA+ L SS C+ L  L+LNNNGLGI+G K+L+KAL DCY
Sbjct: 114 GTRLFELDLSDNAFGPIGIEGLANFLTSSSCYTLRVLRLNNNGLGISGGKILAKALLDCY 173

Query: 284 ESSKKEGSP-LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            +S + GSP LALKVF+AGRNRLEN+GAK LA+VF+KL +LE V MPQNGIY+ GI AL+
Sbjct: 174 NNSFQGGSPALALKVFVAGRNRLENDGAKALASVFEKLTSLEEVVMPQNGIYYEGIIALA 233

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           +    N  LR LNLNDNT+  KGA  + +AL    +L  LNLGDCLLK+ G   +A+ L 
Sbjct: 234 NGLSSNPGLRILNLNDNTVGPKGAQAIAKALPNFQNLEQLNLGDCLLKTQGGVVLAEALG 293

Query: 402 --TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMK 458
                  L ++NL+ NEI  +G   +  AM  K +L  + +  N FG+ G   + + L+ 
Sbjct: 294 VEGSYPLLAELNLSYNEIRTRGANPIALAMAKKERLVTLQLDGNHFGQTGRTILRDSLII 353

Query: 459 SFGMAAALVLEDDE 472
           S  + +   L DDE
Sbjct: 354 SERIGSLGTLNDDE 367



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 96/164 (58%), Gaps = 4/164 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+VF+KL +LE V MPQNGIY+ GI AL++    N  LR LNLNDNT+  KGA  + +A
Sbjct: 204 LASVFEKLTSLEEVVMPQNGIYYEGIIALANGLSSNPGLRILNLNDNTVGPKGAQAIAKA 263

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L    +L  LNLGDCLLK+ G   +A+ L        L ++NL+ NEI  +G   +  AM
Sbjct: 264 LPNFQNLEQLNLGDCLLKTQGGVVLAEALGVEGSYPLLAELNLSYNEIRTRGANPIALAM 323

Query: 119 KNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDE 161
             K +L  + +  N FG+ G   + + L+ S  + +   L DDE
Sbjct: 324 AKKERLVTLQLDGNHFGQTGRTILRDSLIISERIGSLGTLNDDE 367



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 29/251 (11%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQAL------- 62
           L  +++  N    +GI  L++    +    LR L LN+N +   G   L +AL       
Sbjct: 117 LFELDLSDNAFGPIGIEGLANFLTSSSCYTLRVLRLNNNGLGISGGKILAKALLDCYNNS 176

Query: 63  ----SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
               S   +L +   G   L++ GA ++A      T+LE+V +  N I  +G + L   +
Sbjct: 177 FQGGSPALALKVFVAGRNRLENDGAKALASVFEKLTSLEEVVMPQNGIYYEGIIALANGL 236

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEND 178
            +   L+ +N+++N  G +G + + K + +F     L L    G+C  + Q      E  
Sbjct: 237 SSNPGLRILNLNDNTVGPKGAQAIAKALPNFQNLEQLNL----GDCLLKTQGGVVLAE-A 291

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
              EG    L+  + N S+N               +N   +++    RLV L L  N FG
Sbjct: 292 LGVEGSYPLLA--ELNLSYNEIRTRG---------ANPIALAMAKKERLVTLQLDGNHFG 340

Query: 239 PIGVEGLADLL 249
             G   L D L
Sbjct: 341 QTGRTILRDSL 351


>gi|346472239|gb|AEO35964.1| hypothetical protein [Amblyomma maculatum]
          Length = 568

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/242 (54%), Positives = 170/242 (70%), Gaps = 1/242 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L + A L ELDLSDNAFGP+G E L  LL S CCF LE L+LNNNGLG  G  LL+KAL 
Sbjct: 108 LLSKAMLTELDLSDNAFGPVGAEALVVLLSSPCCFQLEVLRLNNNGLGTGGAALLAKALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C   S   G PLAL+ FI GRNRLEN GA  L+AVF KL +L+ V +PQNGIYH GI A
Sbjct: 168 ACITESTAAGKPLALRTFICGRNRLENPGAIALSAVFGKLNSLQEVALPQNGIYHEGIAA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+     N++LR LNLNDNT T +GA  + QAL  L  L I+N GDCL+++AGA +IA  
Sbjct: 228 LAKGLVCNRDLRVLNLNDNTFTPEGARHMSQALCHLNKLEIINFGDCLIRTAGAKAIAIA 287

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L D ++TL+DVNL  NE+++ GGL +V+A+K+K  L+ + +  N+FG +GV ++E +M++
Sbjct: 288 LKDGHSTLKDVNLGYNELTLDGGLAIVEAVKDKPLLETLELDGNKFGTDGVGKLEGVMEA 347

Query: 460 FG 461
            G
Sbjct: 348 AG 349



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 74/150 (49%), Positives = 107/150 (71%), Gaps = 1/150 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+AVF KL +L+ V +PQNGIYH GI AL+     N+ LR LNLNDNT T +GA  + QA
Sbjct: 200 LSAVFGKLNSLQEVALPQNGIYHEGIAALAKGLVCNRDLRVLNLNDNTFTPEGARHMSQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  L I+N GDCL+++AGA +IA  L D ++TL+DVNL  NE+++ GGL +V+A+K+
Sbjct: 260 LCHLNKLEIINFGDCLIRTAGAKAIAIALKDGHSTLKDVNLGYNELTLDGGLAIVEAVKD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFG 150
           K  L+ + +  N+FG +GV ++E +M++ G
Sbjct: 320 KPLLETLELDGNKFGTDGVGKLEGVMEAAG 349


>gi|355563706|gb|EHH20268.1| hypothetical protein EGK_03083 [Macaca mulatta]
 gi|355785021|gb|EHH65872.1| hypothetical protein EGM_02728 [Macaca fascicularis]
          Length = 587

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKTELEKLDLNGNTLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 102/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KTELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354


>gi|402884369|ref|XP_003905658.1| PREDICTED: ran GTPase-activating protein 1 [Papio anubis]
          Length = 649

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/253 (50%), Positives = 176/253 (69%), Gaps = 2/253 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 171 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 230

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H G+TA
Sbjct: 231 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGVTA 290

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 291 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 350

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +KT+L++++++ N  GEEG E+++++++ 
Sbjct: 351 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKTELEKLDLNGNTLGEEGCEQLQEVLEG 410

Query: 460 FGMAAALV-LEDD 471
           F MA  L  L DD
Sbjct: 411 FNMAKVLASLSDD 423



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 105/161 (65%), Gaps = 2/161 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 263 LAEAFRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 322

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 323 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 382

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDD 160
           KT+L++++++ N  GEEG E+++++++ F MA  L  L DD
Sbjct: 383 KTELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDD 423


>gi|4506411|ref|NP_002874.1| ran GTPase-activating protein 1 [Homo sapiens]
 gi|1172922|sp|P46060.1|RAGP1_HUMAN RecName: Full=Ran GTPase-activating protein 1; Short=RanGAP1
 gi|575268|emb|CAA57714.1| RanGAP1 [Homo sapiens]
 gi|15559354|gb|AAH14044.1| Ran GTPase activating protein 1 [Homo sapiens]
 gi|34783356|gb|AAH41396.1| RANGAP1 protein [Homo sapiens]
 gi|47678645|emb|CAG30443.1| RANGAP1 [Homo sapiens]
 gi|109451454|emb|CAK54588.1| RANGAP1 [synthetic construct]
 gi|109452050|emb|CAK54887.1| RANGAP1 [synthetic construct]
 gi|119580827|gb|EAW60423.1| Ran GTPase activating protein 1, isoform CRA_d [Homo sapiens]
 gi|119580828|gb|EAW60424.1| Ran GTPase activating protein 1, isoform CRA_d [Homo sapiens]
 gi|168270736|dbj|BAG10161.1| Ran GTPase-activating protein 1 [synthetic construct]
          Length = 587

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354


>gi|14017887|dbj|BAB47464.1| KIAA1835 protein [Homo sapiens]
          Length = 623

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 144 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALT 203

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 204 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 263

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 264 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 323

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 324 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 383

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 384 FNMAKVL 390



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 236 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 295

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 296 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 355

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 356 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 390


>gi|195031272|ref|XP_001988320.1| GH11099 [Drosophila grimshawi]
 gi|193904320|gb|EDW03187.1| GH11099 [Drosophila grimshawi]
          Length = 601

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/247 (50%), Positives = 166/247 (67%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L  LDLSDNA GP G+ GL + LRS  C++L+EL LNN GLG  G ++LS AL 
Sbjct: 104 IAAGAKLTVLDLSDNALGPNGMTGLEEFLRSPVCYSLQELYLNNCGLGPEGGRMLSVALI 163

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D YE++K  G PL L++F+AGRNRLENEGAK L+  FK+L+TLE + MPQN IYHVG+  
Sbjct: 164 DLYENAKAAGKPLQLRIFVAGRNRLENEGAKALSKTFKRLQTLEEITMPQNSIYHVGVAD 223

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+++F+ N +LR LN+NDNT+T KGA  +       P L  +N GDCLLK+ GA   A+ 
Sbjct: 224 LAESFKLNPHLRVLNMNDNTLTIKGASKIADVFVHTPLLREINFGDCLLKTDGAYLFAEA 283

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L  N   LE +++  N+I+  GGL LV AM+NK KL+ +N+  N FG  GV ++   +  
Sbjct: 284 LEKNHEHLEVLDMGFNDINYDGGLVLVTAMQNKPKLRSLNLDGNCFGHSGVAQIIAEITK 343

Query: 460 FGMAAAL 466
           F   AAL
Sbjct: 344 FRNPAAL 350



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 97/155 (62%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  FK+L+TLE + MPQN IYHVG+  L+++F+ N  LR LN+NDNT+T KGA  +   
Sbjct: 196 LSKTFKRLQTLEEITMPQNSIYHVGVADLAESFKLNPHLRVLNMNDNTLTIKGASKIADV 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
               P L  +N GDCLLK+ GA   A+ L  N   LE +++  N+I+  GGL LV AM+N
Sbjct: 256 FVHTPLLREINFGDCLLKTDGAYLFAEALEKNHEHLEVLDMGFNDINYDGGLVLVTAMQN 315

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K KL+ +N+  N FG  GV ++   +  F   AAL
Sbjct: 316 KPKLRSLNLDGNCFGHSGVAQIIAEITKFRNPAAL 350


>gi|119580824|gb|EAW60420.1| Ran GTPase activating protein 1, isoform CRA_a [Homo sapiens]
          Length = 669

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 173/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 163 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALT 222

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 223 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 282

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 283 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 342

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 343 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 402

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 403 FNMAKVL 409



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 255 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 314

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 315 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 374

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 375 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 409


>gi|426394588|ref|XP_004063574.1| PREDICTED: ran GTPase-activating protein 1 isoform 1 [Gorilla
           gorilla gorilla]
 gi|426394590|ref|XP_004063575.1| PREDICTED: ran GTPase-activating protein 1 isoform 2 [Gorilla
           gorilla gorilla]
 gi|426394592|ref|XP_004063576.1| PREDICTED: ran GTPase-activating protein 1 isoform 3 [Gorilla
           gorilla gorilla]
          Length = 587

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 172/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354


>gi|224095079|ref|XP_002197657.1| PREDICTED: ran GTPase-activating protein 1 [Taeniopygia guttata]
          Length = 571

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 120/247 (48%), Positives = 172/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  C+ L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 IAAGAQLVELDLSDNAFGPDGVRGFEALLKSPACYTLQELKLNNCGMGIGGGKILAAALK 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALK+F+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKIFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  L+ +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLKVINLNDNTFTEKGAVAMAETLKALRQIEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + +    L+++NL+  EI     L + +A+++KT+L++++++ N  GEE  E++ ++++ 
Sbjct: 288 VKEGLHKLKELNLSFCEIKRDAALTVAEAIEDKTELEKLDLNGNCLGEEVCEQLHEILEG 347

Query: 460 FGMAAAL 466
           F MA+ L
Sbjct: 348 FNMASVL 354



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 102/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  L+ +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINPLLKVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  + +    L+++NL+  EI     L + +A+++
Sbjct: 260 LKALRQIEVINFGDCLVRSKGAVAIADAVKEGLHKLKELNLSFCEIKRDAALTVAEAIED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEE  E++ ++++ F MA+ L
Sbjct: 320 KTELEKLDLNGNCLGEEVCEQLHEILEGFNMASVL 354


>gi|183986703|ref|NP_001116940.1| Ran GTPase activating protein 1 [Xenopus (Silurana) tropicalis]
 gi|170284506|gb|AAI61050.1| rangap1 protein [Xenopus (Silurana) tropicalis]
          Length = 582

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 119/244 (48%), Positives = 172/244 (70%), Gaps = 1/244 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L ELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 109 ITAGAQLTELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 168

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +CY+ S   G PLALKVFIAGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 169 ECYKKSSSHGKPLALKVFIAGRNRLENDGATALAEAFRLIGTLEEVHMPQNGINHAGITA 228

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+++F+ N  L+ +NLNDNT T KG I + +AL  L  + ++N GDCL++S GA +IA  
Sbjct: 229 LAESFKANSLLKVINLNDNTFTEKGGIAMAEALKTLRQVEVINFGDCLVRSKGAQAIATA 288

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L+++NL+  EI     + L ++++++++L++++++ N  GE G E+++++++ 
Sbjct: 289 LKEGLHKLKELNLSFCEIKRDAAVVLAESVEDRSELQKLDLNGNCLGEGGCEQVQEILEG 348

Query: 460 FGMA 463
             MA
Sbjct: 349 ISMA 352



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 103/152 (67%), Gaps = 1/152 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+++F+ N  L+ +NLNDNT T KG I + +A
Sbjct: 201 LAEAFRLIGTLEEVHMPQNGINHAGITALAESFKANSLLKVINLNDNTFTEKGGIAMAEA 260

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  L +    L+++NL+  EI     + L +++++
Sbjct: 261 LKTLRQVEVINFGDCLVRSKGAQAIATALKEGLHKLKELNLSFCEIKRDAAVVLAESVED 320

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           +++L++++++ N  GE G E+++++++   MA
Sbjct: 321 RSELQKLDLNGNCLGEGGCEQVQEILEGISMA 352


>gi|307170455|gb|EFN62725.1| Ran GTPase-activating protein 1 [Camponotus floridanus]
          Length = 531

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/214 (58%), Positives = 158/214 (73%), Gaps = 3/214 (1%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           ++L ELDLSDNAFGPIG++GLA+LL SS C+ L+EL+LNNNGLGI+G K+L+KAL  C E
Sbjct: 111 SQLTELDLSDNAFGPIGIQGLANLLTSSPCYTLQELRLNNNGLGISGGKMLAKALEKCLE 170

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           +S KEG+PLALKVFI GRNRLENEGA+ LA VF+KLKTLE V M QNGIYH+GI A++  
Sbjct: 171 NSSKEGAPLALKVFIVGRNRLENEGAQALAGVFEKLKTLEEVVMQQNGIYHIGIAAIAQG 230

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
              N NLR LNLNDNTI  KGA  L + L     L  LNLGDCLLK+ GA  +A+ L   
Sbjct: 231 LSANPNLRVLNLNDNTIGLKGAKALAKVLPIFRGLEELNLGDCLLKTKGALILAETLEIH 290

Query: 403 -DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
            ++ +L+ ++L+ NE+ V  G  + KA  +KT L
Sbjct: 291 GNHPSLKYLDLSNNELRVDAGNAIAKATHDKTLL 324



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 3/126 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA VF+KLKTLE V M QNGIYH+GI A++     N  LR LNLNDNTI  KGA  L + 
Sbjct: 199 LAGVFEKLKTLEEVVMQQNGIYHIGIAAIAQGLSANPNLRVLNLNDNTIGLKGAKALAKV 258

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT---DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L     L  LNLGDCLLK+ GA  +A+ L    ++ +L+ ++L+ NE+ V  G  + KA 
Sbjct: 259 LPIFRGLEELNLGDCLLKTKGALILAETLEIHGNHPSLKYLDLSNNELRVDAGNAIAKAT 318

Query: 119 KNKTKL 124
            +KT L
Sbjct: 319 HDKTLL 324



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 3/119 (2%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           +N + + G  AL+  FE+ K L  + +  N I + G   + Q LS  P+L +LNL D  +
Sbjct: 188 RNRLENEGAQALAGVFEKLKTLEEVVMQQNGIYHIGIAAIAQGLSANPNLRVLNLNDNTI 247

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK---NKTKLKQINVSENQF 134
              GA ++AK L     LE++NL    +  +G L L + ++   N   LK +++S N+ 
Sbjct: 248 GLKGAKALAKVLPIFRGLEELNLGDCLLKTKGALILAETLEIHGNHPSLKYLDLSNNEL 306


>gi|223648660|gb|ACN11088.1| Ran GTPase-activating protein 1 [Salmo salar]
          Length = 538

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 118/243 (48%), Positives = 172/243 (70%), Gaps = 1/243 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GARL  LDLSDNAFGP GV+G+  LL+S+ C  L+EL+LNN G+GI G K+L+ AL 
Sbjct: 108 MTAGARLTVLDLSDNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +CY+ S  +G+PL LKVFIAGRNRLEN+GA  LA  F+ + +LE V +PQNGI H G+TA
Sbjct: 168 ECYKQSSAQGTPLGLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A + N  LR LNLNDNT T KGAI + QAL  L S+ ++N GDCL++S GA +IA+ 
Sbjct: 228 LATAMQHNPQLRVLNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +T+    L+++NL+  EI+ +  L + ++++ K  L++++++ N  G+EG + + ++M  
Sbjct: 288 VTEGLPILKELNLSFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGQEGCDALREVMDG 347

Query: 460 FGM 462
             M
Sbjct: 348 LNM 350



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 102/151 (67%), Gaps = 1/151 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + +LE V +PQNGI H G+TAL+ A + N +LR LNLNDNT T KGAI + QA
Sbjct: 200 LAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRVLNLNDNTFTKKGAIAMAQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L S+ ++N GDCL++S GA +IA+ +T+    L+++NL+  EI+ +  L + ++++ 
Sbjct: 260 LKHLRSVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNLSFGEITGEAALLVAQSVEG 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
           K  L++++++ N  G+EG + + ++M    M
Sbjct: 320 KATLEKLDLNGNCLGQEGCDALREVMDGLNM 350


>gi|114686613|ref|XP_001169248.1| PREDICTED: ran GTPase-activating protein 1 isoform 5 [Pan
           troglodytes]
 gi|114686615|ref|XP_001169322.1| PREDICTED: ran GTPase-activating protein 1 isoform 8 [Pan
           troglodytes]
 gi|332859885|ref|XP_001169029.2| PREDICTED: ran GTPase-activating protein 1 isoform 1 [Pan
           troglodytes]
 gi|410055961|ref|XP_003953944.1| PREDICTED: ran GTPase-activating protein 1 [Pan troglodytes]
 gi|410221174|gb|JAA07806.1| Ran GTPase activating protein 1 [Pan troglodytes]
 gi|410341045|gb|JAA39469.1| Ran GTPase activating protein 1 [Pan troglodytes]
 gi|410341047|gb|JAA39470.1| Ran GTPase activating protein 1 [Pan troglodytes]
          Length = 587

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 172/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354


>gi|410260414|gb|JAA18173.1| Ran GTPase activating protein 1 [Pan troglodytes]
          Length = 587

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 172/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354


>gi|213511692|ref|NP_001133352.1| retrograde Golgi transport protein RGP1 homolog [Salmo salar]
 gi|209151695|gb|ACI33079.1| Ran GTPase-activating protein 1 [Salmo salar]
          Length = 573

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 117/243 (48%), Positives = 172/243 (70%), Gaps = 1/243 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GARL  LDLSDNAFGP GV+G+  LL+S+ C  L+EL+LNN G+G+ G K+L+ AL 
Sbjct: 108 MTAGARLTVLDLSDNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGVGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +CY+ S  +G+PL LKVFIAGRNRLEN+GA  LA  F+ + +LE V +PQNGI H G+TA
Sbjct: 168 ECYKQSSAQGTPLGLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A + N  LR LNLNDNT T KGAI + QAL  L  + ++N GDCL++S GA +IA+ 
Sbjct: 228 LATAMQHNPQLRVLNLNDNTFTKKGAIAMAQALKHLRRVQVINFGDCLVRSEGAIAIAEA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +T+    L+++NL+  EI+ +  L + ++++ K  L++++++ N  GEEG +++ ++M  
Sbjct: 288 VTEGLPILKELNLSFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDDLREVMDG 347

Query: 460 FGM 462
             M
Sbjct: 348 LNM 350



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 102/151 (67%), Gaps = 1/151 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + +LE V +PQNGI H G+TAL+ A + N +LR LNLNDNT T KGAI + QA
Sbjct: 200 LAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRVLNLNDNTFTKKGAIAMAQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA+ +T+    L+++NL+  EI+ +  L + ++++ 
Sbjct: 260 LKHLRRVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNLSFGEITGEAALLVAQSVEG 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
           K  L++++++ N  GEEG +++ ++M    M
Sbjct: 320 KATLEKLDLNGNCLGEEGCDDLREVMDGLNM 350


>gi|72003823|gb|AAZ65852.1| Ran GTPase-activating protein [Aedes aegypti]
 gi|77808099|gb|ABB03731.1| Ran GTPase-activating protein [Aedes aegypti]
          Length = 583

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/247 (53%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L  LD SDNA GP G+ GL DLL+S+ C+ L+E KLNN GLGI G K+LSKAL 
Sbjct: 107 IAAGAQLTVLDCSDNALGPNGMTGLVDLLKSATCYTLQEPKLNNCGLGIGGGKMLSKALL 166

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C+ +S + G PL+LKVFIAGRNRLEN+GAK LA VF K++TLE + MPQNGIYHVGITA
Sbjct: 167 ACHAASSELGKPLSLKVFIAGRNRLENDGAKALAEVFGKVRTLEHIGMPQNGIYHVGITA 226

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS+AF+EN NL+ LNLNDNTI  KGA  +  A+  L  L  +N GDCLLK+ GA  + + 
Sbjct: 227 LSEAFKENGNLKVLNLNDNTIGPKGAAAIADAIYDLQCLREINFGDCLLKTKGAMLLGEA 286

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L + +T +E +N   NEI  +GG  +  A  NK  LK + +  NQFG E  E++ + +  
Sbjct: 287 LQEAHTDIEVLNFGFNEIGPEGGFAIANATYNKDNLKSLILDGNQFGYECREQLRETLTQ 346

Query: 460 FGMAAAL 466
           +    AL
Sbjct: 347 YDRLEAL 353



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA VF K++TLEH+ MPQNGIYHVGITALS+AF+EN  L+ LNLNDNTI  KGA  +  A
Sbjct: 199 LAEVFGKVRTLEHIGMPQNGIYHVGITALSEAFKENGNLKVLNLNDNTIGPKGAAAIADA 258

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L  +N GDCLLK+ GA  + + L + +T +E +N   NEI  +GG  +  A  N
Sbjct: 259 IYDLQCLREINFGDCLLKTKGAMLLGEALQEAHTDIEVLNFGFNEIGPEGGFAIANATYN 318

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K  LK + +  NQFG E  E++ + +  +    AL
Sbjct: 319 KDNLKSLILDGNQFGYECREQLRETLTQYDRLEAL 353



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 87/219 (39%), Gaps = 37/219 (16%)

Query: 254 CFALEELKLNNNGLGITGCKLLSKALH-----------DCYESSKKEGSPLALKVFIAGR 302
           C  L  L L  N LG+   K ++KAL            D +    K   PLALK      
Sbjct: 47  CTGLHSLNLEGNTLGVEAAKGIAKALEKHPELKEALWKDLFTGRMKTEIPLALKAM---- 102

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNT 360
                 G  M+AA  +    L  ++   N +   G+T L D  +      L+   LN+  
Sbjct: 103 ------GEGMIAAGAQ----LTVLDCSDNALGPNGMTGLVDLLKSATCYTLQEPKLNNCG 152

Query: 361 ITYKGAIPLGQA----------LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           +   G   L +A          L K  SL +   G   L++ GA ++A+      TLE +
Sbjct: 153 LGIGGGKMLSKALLACHAASSELGKPLSLKVFIAGRNRLENDGAKALAEVFGKVRTLEHI 212

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            +  N I   G   L +A K    LK +N+++N  G +G
Sbjct: 213 GMPQNGIYHVGITALSEAFKENGNLKVLNLNDNTIGPKG 251


>gi|395819691|ref|XP_003783213.1| PREDICTED: ran GTPase-activating protein 1 [Otolemur garnettii]
          Length = 585

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 126/247 (51%), Positives = 171/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALI 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +CY  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECYRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +KT+L++++++ N  GEEG E++++++  
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKTELEKLDLNGNILGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KTELEKLDLNGNILGEEGCEQLQEVLDGFNMAKVL 354


>gi|390458866|ref|XP_002806612.2| PREDICTED: LOW QUALITY PROTEIN: ran GTPase-activating protein 1
           [Callithrix jacchus]
          Length = 642

 Score =  238 bits (606), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 124/247 (50%), Positives = 172/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 163 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLRELKLNNCGMGIGGGKILAAALT 222

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C++ S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H G+TA
Sbjct: 223 ECHQKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGVTA 282

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 283 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 342

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E++++++  
Sbjct: 343 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLDG 402

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 403 FNMAKVL 409



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 255 LAEAFRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 314

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 315 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 374

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++  F MA  L
Sbjct: 375 KAELEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVL 409



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 10/120 (8%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALS----------KLPSLAILNLGDCLLKSAGASSIAKY 89
           LR L LN+  +   G   L  AL+          K  +L +   G   L++ GA+++A+ 
Sbjct: 199 LRELKLNNCGMGIGGGKILAAALTECHQKSSAQGKPLALKVFVAGRNRLENDGATALAEA 258

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
                TLE+V++  N I+  G   L +A      L+ IN+++N F E+G   M + +K+ 
Sbjct: 259 FRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTL 318


>gi|291410330|ref|XP_002721453.1| PREDICTED: Ran GTPase activating protein 1 [Oryctolagus cuniculus]
          Length = 630

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 171/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF+L+ELKLNN G+GI G K+L+ AL 
Sbjct: 149 VTAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFSLQELKLNNCGMGIGGGKILAAALT 208

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +CY  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 209 ECYRKSSSQGKPLALKVFMAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 268

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 269 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 328

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     + + +A+ +KT+L++++++ N  GEEG E++++++ S
Sbjct: 329 VRGGLPKLKELNLSFCEIKRDAAVAVAEAVADKTELEKLDLNGNTLGEEGCEQLQEVLDS 388

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 389 FNMAKVL 395



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 241 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 300

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     + + +A+ +
Sbjct: 301 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAAVAVAEAVAD 360

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E++++++ SF MA  L
Sbjct: 361 KTELEKLDLNGNTLGEEGCEQLQEVLDSFNMAKVL 395


>gi|148232694|ref|NP_001080230.1| RAN GTPase activating protein 1 [Xenopus laevis]
 gi|27694806|gb|AAH43982.1| Rangap1-prov protein [Xenopus laevis]
          Length = 584

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 119/244 (48%), Positives = 170/244 (69%), Gaps = 1/244 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L ELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLTELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +CY+ S   G PLALKVFIAGRNRLEN+GA  L+  F+ + +LE V MPQNGI H GITA
Sbjct: 168 ECYKKSSSHGKPLALKVFIAGRNRLENDGATALSEAFRLIGSLEEVHMPQNGINHAGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+D+F+ N  L+ +NLNDNT T KG I + +AL  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LADSFKANSLLKVINLNDNTFTEKGGIAMAEALKTLRQVEVINFGDCLVRSKGAQAIASA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L+++NL+  EI     + L +++++K+ L++++++ N  GE G E++++++  
Sbjct: 288 LKEGLHKLKELNLSFCEIKRDAAVSLAESVEDKSDLEKLDLNGNCLGEGGCEQVQEILDG 347

Query: 460 FGMA 463
             MA
Sbjct: 348 INMA 351



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 101/152 (66%), Gaps = 1/152 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  F+ + +LE V MPQNGI H GITAL+D+F+ N  L+ +NLNDNT T KG I + +A
Sbjct: 200 LSEAFRLIGSLEEVHMPQNGINHAGITALADSFKANSLLKVINLNDNTFTEKGGIAMAEA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  L +    L+++NL+  EI     + L +++++
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAQAIASALKEGLHKLKELNLSFCEIKRDAAVSLAESVED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           K+ L++++++ N  GE G E++++++    MA
Sbjct: 320 KSDLEKLDLNGNCLGEGGCEQVQEILDGINMA 351


>gi|403282920|ref|XP_003932881.1| PREDICTED: ran GTPase-activating protein 1 isoform 1 [Saimiri
           boliviensis boliviensis]
 gi|403282922|ref|XP_003932882.1| PREDICTED: ran GTPase-activating protein 1 isoform 2 [Saimiri
           boliviensis boliviensis]
 gi|403282924|ref|XP_003932883.1| PREDICTED: ran GTPase-activating protein 1 isoform 3 [Saimiri
           boliviensis boliviensis]
          Length = 583

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/247 (50%), Positives = 171/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLRELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAIAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E++++++  
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAIAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVL 354



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 10/120 (8%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALS----------KLPSLAILNLGDCLLKSAGASSIAKY 89
           LR L LN+  +   G   L  AL+          K  +L +   G   L++ GA+++A+ 
Sbjct: 144 LRELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEA 203

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
                TLE+V++  N I+  G   L +A      L+ IN+++N F E+G   M + +K+ 
Sbjct: 204 FRVIGTLEEVHMPQNGINHPGVTALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTL 263


>gi|383853317|ref|XP_003702169.1| PREDICTED: ran GTPase-activating protein 1-like [Megachile
           rotundata]
          Length = 617

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/239 (52%), Positives = 165/239 (69%), Gaps = 4/239 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G +L ELDLSDNAFGP+GV G+A  L SS C+ L  LKL+N GLG TG K+++KAL DCY
Sbjct: 114 GTQLTELDLSDNAFGPVGVRGIASFLTSSSCYTLRILKLHNTGLGATGGKIVAKALLDCY 173

Query: 284 ESSKKEG-SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            +S K G SPLALKVF+AGRNRLE+EGA+ LA+VF+KL +LE V MPQNGIYH GITA++
Sbjct: 174 NNSSKAGTSPLALKVFVAGRNRLEDEGAEALASVFQKLTSLEEVVMPQNGIYHQGITAIA 233

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
                N  L+ LNLNDNT+ +KGA  L +AL    +L  LNLGDCLLK+ G+  +A+ L 
Sbjct: 234 HGLSSNPGLKILNLNDNTVGFKGAQALAKALPNFQNLEQLNLGDCLLKTQGSLILAEALG 293

Query: 402 --TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  +L ++NL+ NEI  +G   + +AM +K +L  + +  N FG  G   +  L+K
Sbjct: 294 VEGNYPSLTELNLSYNEIRKEGANSIAQAMADKKRLITLELDGNSFGRSGRTMLCNLLK 352



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 94/149 (63%), Gaps = 3/149 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+VF+KL +LE V MPQNGIYH GITA++     N  L+ LNLNDNT+ +KGA  L +A
Sbjct: 204 LASVFQKLTSLEEVVMPQNGIYHQGITAIAHGLSSNPGLKILNLNDNTVGFKGAQALAKA 263

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L    +L  LNLGDCLLK+ G+  +A+ L    +  +L ++NL+ NEI  +G   + +AM
Sbjct: 264 LPNFQNLEQLNLGDCLLKTQGSLILAEALGVEGNYPSLTELNLSYNEIRKEGANSIAQAM 323

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            +K +L  + +  N FG  G   +  L+K
Sbjct: 324 ADKKRLITLELDGNSFGRSGRTMLCNLLK 352



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 29/254 (11%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQAL------- 62
           L  +++  N    VG+  ++     +    LR L L++  +   G   + +AL       
Sbjct: 117 LTELDLSDNAFGPVGVRGIASFLTSSSCYTLRILKLHNTGLGATGGKIVAKALLDCYNNS 176

Query: 63  ----SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
               +   +L +   G   L+  GA ++A      T+LE+V +  N I  QG   +   +
Sbjct: 177 SKAGTSPLALKVFVAGRNRLEDEGAEALASVFQKLTSLEEVVMPQNGIYHQGITAIAHGL 236

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEND 178
            +   LK +N+++N  G +G + + K + +F     L L    G+C  + Q      E  
Sbjct: 237 SSNPGLKILNLNDNTVGFKGAQALAKALPNFQNLEQLNL----GDCLLKTQGSLILAE-A 291

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
              EG+  +L+  + N S+N   +   NS            ++    RL+ L+L  N+FG
Sbjct: 292 LGVEGNYPSLT--ELNLSYNEIRKEGANS---------IAQAMADKKRLITLELDGNSFG 340

Query: 239 PIGVEGLADLLRSS 252
             G   L +LL+ S
Sbjct: 341 RSGRTMLCNLLKDS 354


>gi|344296192|ref|XP_003419793.1| PREDICTED: ran GTPase-activating protein 1 [Loxodonta africana]
          Length = 587

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/247 (49%), Positives = 167/247 (67%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 VTAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+ A
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVMA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA  + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAAAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E++++++  
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVGDKAELEKLDLNGNTLGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+ AL+ AF  N  LR +NLNDNT T KGA  + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVMALAQAFAINPLLRVINLNDNTFTEKGAAAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVGD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVL 354


>gi|307214022|gb|EFN89229.1| Ran GTPase-activating protein 1 [Harpegnathos saltator]
          Length = 503

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/220 (56%), Positives = 159/220 (72%), Gaps = 3/220 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G RL ELDLSDNAFGPIG++GLADLL S  C+ L+EL+LNNNGLGI+G K+L++AL  C+
Sbjct: 114 GTRLTELDLSDNAFGPIGIQGLADLLISHPCYTLQELRLNNNGLGISGGKILAQALLKCH 173

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +S KEG PLALKVFI GRNRLENEGA+ LA VF +LKTLE V M QNGIYH GI A++ 
Sbjct: 174 ANSSKEGKPLALKVFIVGRNRLENEGAQALACVFNELKTLEEVVMQQNGIYHKGIEAIAY 233

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT- 402
               N NLR +NLNDNTI  KGA  + + L    +L  LNLGDCLLK+ GA  +A+ L  
Sbjct: 234 GLSANPNLRIVNLNDNTIGLKGARAVAKVLPTFRNLEELNLGDCLLKTKGALVLAEALAI 293

Query: 403 --DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
             ++ +L +++L+ NEI + GG  + +AM +KT L  + +
Sbjct: 294 IGNHPSLRNLDLSHNEIRIDGGKAIAQAMIDKTLLSNLQL 333



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 3/131 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA VF +LKTLE V M QNGIYH GI A++     N  LR +NLNDNTI  KGA  + + 
Sbjct: 203 LACVFNELKTLEEVVMQQNGIYHKGIEAIAYGLSANPNLRIVNLNDNTIGLKGARAVAKV 262

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT---DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L    +L  LNLGDCLLK+ GA  +A+ L    ++ +L +++L+ NEI + GG  + +AM
Sbjct: 263 LPTFRNLEELNLGDCLLKTKGALVLAEALAIIGNHPSLRNLDLSHNEIRIDGGKAIAQAM 322

Query: 119 KNKTKLKQINV 129
            +KT L  + +
Sbjct: 323 IDKTLLSNLQL 333



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 12/150 (8%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQALSKL---- 65
           L  +++  N    +GI  L+D    +    L+ L LN+N +   G   L QAL K     
Sbjct: 117 LTELDLSDNAFGPIGIQGLADLLISHPCYTLQELRLNNNGLGISGGKILAQALLKCHANS 176

Query: 66  -----P-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
                P +L +  +G   L++ GA ++A    +  TLE+V +  N I  +G   +   + 
Sbjct: 177 SKEGKPLALKVFIVGRNRLENEGAQALACVFNELKTLEEVVMQQNGIYHKGIEAIAYGLS 236

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
               L+ +N+++N  G +G   + K++ +F
Sbjct: 237 ANPNLRIVNLNDNTIGLKGARAVAKVLPTF 266


>gi|410297586|gb|JAA27393.1| Ran GTPase activating protein 1 [Pan troglodytes]
 gi|410297588|gb|JAA27394.1| Ran GTPase activating protein 1 [Pan troglodytes]
          Length = 587

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 171/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL +S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLGRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL +S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLGRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354


>gi|348511273|ref|XP_003443169.1| PREDICTED: ran GTPase-activating protein 1-like [Oreochromis
           niloticus]
          Length = 579

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/242 (48%), Positives = 172/242 (71%), Gaps = 1/242 (0%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
            GARL  LDLSDNAFGP GV+G+ +LL+SS C+ L+EL+LNN G+GI G K+L+ AL   
Sbjct: 110 AGARLTVLDLSDNAFGPDGVKGIENLLKSSTCYTLQELRLNNCGMGIGGGKILAAALIYN 169

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           ++ S  EGSP +LKVF+AGRNRLEN+GA  LA  FK + ++E V MPQNGI H G+TAL+
Sbjct: 170 HKKSSAEGSPFSLKVFVAGRNRLENDGATALAQAFKLIGSMEEVHMPQNGINHAGVTALA 229

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +A + N  LR LNLNDNT T KGAI + QAL  L S+ ++N GDCL++  GA +IA  ++
Sbjct: 230 EAMQHNPGLRILNLNDNTFTEKGAIAMAQALKHLRSIQVINFGDCLVRPEGAKAIAASVS 289

Query: 403 DN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           +    L+++NL+  EI+    L + +A+K+K +L++++++ N  GE+G   ++  M++  
Sbjct: 290 EGLPILKELNLSYGEITEDAALVVAQAVKDKDQLEKLDLNGNCIGEDGCRALKVAMEAMN 349

Query: 462 MA 463
           M+
Sbjct: 350 MS 351



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 102/152 (67%), Gaps = 1/152 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK + ++E V MPQNGI H G+TAL++A + N  LR LNLNDNT T KGAI + QA
Sbjct: 200 LAQAFKLIGSMEEVHMPQNGINHAGVTALAEAMQHNPGLRILNLNDNTFTEKGAIAMAQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L S+ ++N GDCL++  GA +IA  +++    L+++NL+  EI+    L + +A+K+
Sbjct: 260 LKHLRSIQVINFGDCLVRPEGAKAIAASVSEGLPILKELNLSYGEITEDAALVVAQAVKD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           K +L++++++ N  GE+G   ++  M++  M+
Sbjct: 320 KDQLEKLDLNGNCIGEDGCRALKVAMEAMNMS 351


>gi|119580826|gb|EAW60422.1| Ran GTPase activating protein 1, isoform CRA_c [Homo sapiens]
          Length = 615

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/248 (50%), Positives = 172/248 (69%), Gaps = 2/248 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 163 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALT 222

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 223 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 282

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 283 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 342

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV-SENQFGEEGVEEMEKLMK 458
           +      L+++NL+  EI     L + +AM +K +L+++++   N  GEEG E+++++++
Sbjct: 343 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGSNTLGEEGCEQLQEVLE 402

Query: 459 SFGMAAAL 466
            F MA  L
Sbjct: 403 GFNMAKVL 410



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/156 (42%), Positives = 100/156 (64%), Gaps = 2/156 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 255 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 314

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 315 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 374

Query: 121 KTKLKQINV-SENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L+++++   N  GEEG E+++++++ F MA  L
Sbjct: 375 KAELEKLDLNGSNTLGEEGCEQLQEVLEGFNMAKVL 410


>gi|119580825|gb|EAW60421.1| Ran GTPase activating protein 1, isoform CRA_b [Homo sapiens]
          Length = 588

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/248 (50%), Positives = 173/248 (69%), Gaps = 2/248 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS-ENQFGEEGVEEMEKLMK 458
           +      L+++NL+  EI     L + +AM +K +L++++++  N  GEEG E+++++++
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGSNTLGEEGCEQLQEVLE 347

Query: 459 SFGMAAAL 466
            F MA  L
Sbjct: 348 GFNMAKVL 355



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/156 (42%), Positives = 101/156 (64%), Gaps = 2/156 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVS-ENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++  N  GEEG E+++++++ F MA  L
Sbjct: 320 KAELEKLDLNGSNTLGEEGCEQLQEVLEGFNMAKVL 355


>gi|431900045|gb|ELK07980.1| Ran GTPase-activating protein 1 [Pteropus alecto]
          Length = 585

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 124/247 (50%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + Q L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRIINLNDNTFTEKGAVAMAQTLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E++++++  
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNILGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FSMAKVL 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + Q 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRIINLNDNTFTEKGAVAMAQT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KAELEKLDLNGNILGEEGCEQLQEVLDGFSMAKVL 354


>gi|37360568|dbj|BAC98262.1| mKIAA1835 protein [Mus musculus]
          Length = 646

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 165 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 224

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 225 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 284

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 285 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 344

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E+++++M S
Sbjct: 345 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 404

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 405 FNMAKVL 411



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 257 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 316

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 317 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 376

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 377 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 411


>gi|321475579|gb|EFX86541.1| hypothetical protein DAPPUDRAFT_307848 [Daphnia pulex]
          Length = 590

 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 119/247 (48%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A L+ELDLSDNA GP+G+EGL   L+S  C++L+ ++LNNNGLGI G ++L++AL+DC +
Sbjct: 113 ANLIELDLSDNALGPVGMEGLVQFLKSPVCYSLKCIRLNNNGLGIYGGRMLAQALNDCLK 172

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           +SK+ GSPL LK FI GRNRLENEGA  L+  FK + TLE V+MPQN I H GI AL+ A
Sbjct: 173 ASKEAGSPLNLKTFIVGRNRLENEGAIALSEFFKAVGTLEEVQMPQNFIRHPGILALASA 232

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD- 403
              N  LR LN NDNT T++G+  + +AL K   L+++N GDCL+++ GA  +AK L+  
Sbjct: 233 LIHNPGLRILNFNDNTFTWRGSQAVAEALPKWQQLSVINFGDCLIRTKGAEFLAKALSSG 292

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 463
           +  L++V +   EI++ G   L  ++KNK  LK  +++ NQ GEEG +E++ +    G  
Sbjct: 293 HEHLKEVYMDHGEINLSGAKLLANSLKNKKMLKICDLNGNQLGEEGCQELKDIFSGLGEK 352

Query: 464 AALVLED 470
             L L D
Sbjct: 353 VLLSLSD 359



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 97/159 (61%), Gaps = 1/159 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  FK + TLE V+MPQN I H GI AL+ A   N  LR LN NDNT T++G+  + +A
Sbjct: 201 LSEFFKAVGTLEEVQMPQNFIRHPGILALASALIHNPGLRILNFNDNTFTWRGSQAVAEA 260

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L K   L+++N GDCL+++ GA  +AK L+  +  L++V +   EI++ G   L  ++KN
Sbjct: 261 LPKWQQLSVINFGDCLIRTKGAEFLAKALSSGHEHLKEVYMDHGEINLSGAKLLANSLKN 320

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           K  LK  +++ NQ GEEG +E++ +    G    L L D
Sbjct: 321 KKMLKICDLNGNQLGEEGCQELKDIFSGLGEKVLLSLSD 359


>gi|148672614|gb|EDL04561.1| RAN GTPase activating protein 1, isoform CRA_b [Mus musculus]
          Length = 680

 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 199 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 258

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 259 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 318

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 319 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 378

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E+++++M S
Sbjct: 379 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 438

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 439 FNMAKVL 445



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 291 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 350

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 351 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 410

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 411 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 445


>gi|444723811|gb|ELW64441.1| Ran GTPase-activating protein 1 [Tupaia chinensis]
          Length = 1379

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 170 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 229

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 230 ECHHKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITA 289

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 290 LAQAFAINPLLRVVNLNDNTFTEKGAMAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 349

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +KT L++++++ N  GEEG E++++++  
Sbjct: 350 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKTALEKLDLNGNTLGEEGCEQLQEVLDG 409

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 410 FNMAKVL 416



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 262 LAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINPLLRVVNLNDNTFTEKGAMAMAET 321

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 322 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 381

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT L++++++ N  GEEG E++++++  F MA  L
Sbjct: 382 KTALEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVL 416


>gi|226051567|ref|NP_001139646.1| ran GTPase-activating protein 1 [Mus musculus]
 gi|226062635|ref|NP_035371.4| ran GTPase-activating protein 1 [Mus musculus]
 gi|341941806|sp|P46061.2|RAGP1_MOUSE RecName: Full=Ran GTPase-activating protein 1; Short=RanGAP1
 gi|42490971|gb|AAH66213.1| Rangap1 protein [Mus musculus]
 gi|47937396|gb|AAH71200.1| Rangap1 protein [Mus musculus]
 gi|74144736|dbj|BAE27347.1| unnamed protein product [Mus musculus]
 gi|74186578|dbj|BAE34767.1| unnamed protein product [Mus musculus]
 gi|74197221|dbj|BAE35154.1| unnamed protein product [Mus musculus]
          Length = 589

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E+++++M S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 354


>gi|15928791|gb|AAH14855.1| Rangap1 protein [Mus musculus]
          Length = 589

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E+++++M S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 354


>gi|335006705|ref|NP_001229407.1| ran GTPase-activating protein 1 [Equus caballus]
          Length = 590

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKSLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E++++++  
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNTLGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FSMATVL 354



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKSLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLDGFSMATVL 354



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 45/83 (54%)

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
           +L +   G   L++ GA+++A+      TLE+V++  N I+  G   L +A      L+ 
Sbjct: 181 ALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRV 240

Query: 127 INVSENQFGEEGVEEMEKLMKSF 149
           IN+++N F E+G   M K +KS 
Sbjct: 241 INLNDNTFTEKGAVAMAKTLKSL 263


>gi|26353858|dbj|BAC40559.1| unnamed protein product [Mus musculus]
          Length = 589

 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E+++++M S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 354


>gi|722240|gb|AAB60517.1| RNA1 homolog [Mus musculus]
 gi|148672615|gb|EDL04562.1| RAN GTPase activating protein 1, isoform CRA_c [Mus musculus]
          Length = 589

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E+++++M S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 354


>gi|390333375|ref|XP_796931.2| PREDICTED: ran GTPase-activating protein 1 [Strongylocentrotus
           purpuratus]
          Length = 573

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 122/247 (49%), Positives = 171/247 (69%), Gaps = 2/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA LVE+DLSDNAFGP GV+ + +LL SS C++L E++ NNNGLGI G KL+++AL 
Sbjct: 107 MTAGAHLVEIDLSDNAFGPDGVKAVRELLESSSCYSLREMRFNNNGLGIGG-KLMAEALI 165

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C+E S K G PLALKVFIAGRNRLEN GA  LA  FK + TLE + +PQNGI + GITA
Sbjct: 166 TCHEKSSKAGKPLALKVFIAGRNRLENPGATALAKAFKIIGTLEEIALPQNGINYEGITA 225

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L++A E + NL+ LNLNDNT T +GA P+ +A+  L  L ++N GDCL++S GA +IA  
Sbjct: 226 LAEAVEYSHNLKILNLNDNTFTARGAKPMAKAIKNLNKLEVINFGDCLVRSEGADAIANS 285

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +   +L+++NL   EI  +  + + ++M  K  L  ++++ N  GEEG+E ++ +M +
Sbjct: 286 LREGVPSLKELNLAFGEIKKEAAVRVAESMDTKPHLTLLDLNGNNIGEEGIELIQGIMDA 345

Query: 460 FGMAAAL 466
              A AL
Sbjct: 346 NNHADAL 352



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK + TLE + +PQNGI + GITAL++A E +  L+ LNLNDNT T +GA P+ +A
Sbjct: 198 LAKAFKIIGTLEEIALPQNGINYEGITALAEAVEYSHNLKILNLNDNTFTARGAKPMAKA 257

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L ++N GDCL++S GA +IA  L +   +L+++NL   EI  +  + + ++M  
Sbjct: 258 IKNLNKLEVINFGDCLVRSEGADAIANSLREGVPSLKELNLAFGEIKKEAAVRVAESMDT 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K  L  ++++ N  GEEG+E ++ +M +   A AL
Sbjct: 318 KPHLTLLDLNGNNIGEEGIELIQGIMDANNHADAL 352



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 20/222 (9%)

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
            C  ++ LKLN N +G+   + L+KAL    +  +   S +       GR R E   A M
Sbjct: 46  ACEGIQSLKLNGNTIGVEAAQALAKALESKPQFQRARWSDM-----FTGRLRSEIPPALM 100

Query: 313 L--AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKGAIP 368
              A +      L  +++  N     G+ A+ +  E +   +LR +  N+N +   G + 
Sbjct: 101 SLGAGIMTAGAHLVEIDLSDNAFGPDGVKAVRELLESSSCYSLREMRFNNNGLGIGGKL- 159

Query: 369 LGQAL----------SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           + +AL           K  +L +   G   L++ GA+++AK      TLE++ L  N I+
Sbjct: 160 MAEALITCHEKSSKAGKPLALKVFIAGRNRLENPGATALAKAFKIIGTLEEIALPQNGIN 219

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
            +G   L +A++    LK +N+++N F   G + M K +K+ 
Sbjct: 220 YEGITALAEAVEYSHNLKILNLNDNTFTARGAKPMAKAIKNL 261



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 13/150 (8%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQAL------- 62
           L  +++  N     G+ A+ +  E +    LR +  N+N +   G + + +AL       
Sbjct: 113 LVEIDLSDNAFGPDGVKAVRELLESSSCYSLREMRFNNNGLGIGGKL-MAEALITCHEKS 171

Query: 63  ---SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
               K  +L +   G   L++ GA+++AK      TLE++ L  N I+ +G   L +A++
Sbjct: 172 SKAGKPLALKVFIAGRNRLENPGATALAKAFKIIGTLEEIALPQNGINYEGITALAEAVE 231

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
               LK +N+++N F   G + M K +K+ 
Sbjct: 232 YSHNLKILNLNDNTFTARGAKPMAKAIKNL 261


>gi|281341909|gb|EFB17493.1| hypothetical protein PANDA_016778 [Ailuropoda melanoleuca]
          Length = 556

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  +  +N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEAINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +KT+L++++++ N  GEEG E++++++  
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKTELEKLDLNGNTLGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  +  +N GDCL++S GA +IA+ +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEAINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KTELEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVL 354


>gi|301783323|ref|XP_002927074.1| PREDICTED: ran GTPase-activating protein 1-like [Ailuropoda
           melanoleuca]
          Length = 578

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 169/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  +  +N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEAINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +KT+L++++++ N  GEEG E++++++  
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKTELEKLDLNGNTLGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  +  +N GDCL++S GA +IA+ +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEAINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KTELEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVL 354


>gi|115495069|ref|NP_001070084.1| RAN GTPase activating protein 1 [Danio rerio]
 gi|115313865|gb|AAI24541.1| Zgc:154097 [Danio rerio]
          Length = 570

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 115/242 (47%), Positives = 174/242 (71%), Gaps = 1/242 (0%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
            GARL  LDLSDNAFGP GV+G+  LL+S+ C  L+EL+LNN G+GI G K+L+ AL +C
Sbjct: 110 AGARLKVLDLSDNAFGPDGVKGIEKLLKSAACHTLQELRLNNCGMGIGGGKILAAALSEC 169

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           ++ S   G+P  LKVFIAGRNRLEN+GA  LA  F+ + +LE V MPQNGI + G+TAL+
Sbjct: 170 HQQSSALGAPFKLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINYPGVTALA 229

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
            A + N  LR LNLNDNT T KGA+ + QAL  L ++ ++N GDCL++S GAS++A+ + 
Sbjct: 230 TAMQHNPQLRVLNLNDNTFTKKGAMAMAQALKHLRNVQVINFGDCLVRSEGASALAETVR 289

Query: 403 DN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           +    L+++NL+  EI  +  L++ +++++K + ++++++ N  GE+G + +++LM+S  
Sbjct: 290 EGLPILKELNLSFGEIMEEAALEVAQSVQHKDQFEKLDLNGNSLGEDGCKSLKQLMESIN 349

Query: 462 MA 463
           MA
Sbjct: 350 MA 351



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 107/152 (70%), Gaps = 1/152 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + +LE V MPQNGI + G+TAL+ A + N +LR LNLNDNT T KGA+ + QA
Sbjct: 200 LAQAFQLMGSLEEVHMPQNGINYPGVTALATAMQHNPQLRVLNLNDNTFTKKGAMAMAQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L ++ ++N GDCL++S GAS++A+ + +    L+++NL+  EI  +  L++ +++++
Sbjct: 260 LKHLRNVQVINFGDCLVRSEGASALAETVREGLPILKELNLSFGEIMEEAALEVAQSVQH 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           K + ++++++ N  GE+G + +++LM+S  MA
Sbjct: 320 KDQFEKLDLNGNSLGEDGCKSLKQLMESINMA 351


>gi|348569560|ref|XP_003470566.1| PREDICTED: ran GTPase-activating protein 1-like [Cavia porcellus]
          Length = 584

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/247 (49%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TL+ V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGVIGTLQEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K  L++++++ N  GEEG E++++++ S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAGLEKLDLNGNALGEEGCEQLQEVLDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TL+ V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGVIGTLQEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K  L++++++ N  GEEG E++++++ SF MA  L
Sbjct: 320 KAGLEKLDLNGNALGEEGCEQLQEVLDSFNMAKVL 354


>gi|472852|gb|AAA17681.1| homolog of yeast RNA1, RNA production and processing protein, Swiss
           Prot Accession Number P11745 [Mus musculus]
          Length = 589

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/247 (49%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLRLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E+++++M S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 354


>gi|410965691|ref|XP_003989375.1| PREDICTED: ran GTPase-activating protein 1 [Felis catus]
          Length = 587

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/247 (49%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E++++++  
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNTLGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVL 354


>gi|31127291|gb|AAH52862.1| Rangap1 protein [Mus musculus]
          Length = 589

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 122/247 (49%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + +    L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETPKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E+++++M S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
              L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 PKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 354


>gi|354496472|ref|XP_003510350.1| PREDICTED: ran GTPase-activating protein 1 [Cricetulus griseus]
 gi|344249103|gb|EGW05207.1| Ran GTPase-activating protein 1 [Cricetulus griseus]
          Length = 586

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  +  +N GDCL++S GA +IA  
Sbjct: 228 LAQAFSINPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEAINFGDCLVRSKGAIAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E++++++ S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVLDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FSMAKVL 354



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFSINPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  +  +N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEAINFGDCLVRSKGAIAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++ SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVLDSFSMAKVL 354


>gi|195397650|ref|XP_002057441.1| GJ18130 [Drosophila virilis]
 gi|194141095|gb|EDW57514.1| GJ18130 [Drosophila virilis]
          Length = 609

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 119/240 (49%), Positives = 164/240 (68%), Gaps = 5/240 (2%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L  LDLSDNA GP G+ GL + LRS  CF+L+EL LNN GLG  G ++LS+AL 
Sbjct: 104 IAAGAKLTVLDLSDNALGPNGMTGLEEFLRSPVCFSLQELYLNNCGLGPEGGRMLSEALI 163

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D ++++K  G+PL L++F+AGRNRLEN GAK ++  FK L+TLE + MPQN IYHVG+ A
Sbjct: 164 DLHKNAKVAGTPLQLRIFVAGRNRLENAGAKAISKTFKVLQTLEEITMPQNSIYHVGVAA 223

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ +F++N +LR LN+NDNT+  +GA  + +     P L  ++ GDCLLK+ GA   A+ 
Sbjct: 224 LASSFKKNPHLRVLNMNDNTLNVRGAAKIAEVFEHTPLLREIDFGDCLLKTDGAYHFAEA 283

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG----VEEMEK 455
           L  N   LE ++L  NEI+  GGL LV A++NK KL+  N+  N FG+ G    VE+M K
Sbjct: 284 LEQNHEHLEVLDLGFNEINYDGGLALVTAVQNKPKLRIFNLDGNCFGQAGSAQIVEQMAK 343



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 5/148 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++  FK L+TLE + MPQN IYHVG+ AL+ +F++N  LR LN+NDNT+  +GA  + + 
Sbjct: 196 ISKTFKVLQTLEEITMPQNSIYHVGVAALASSFKKNPHLRVLNMNDNTLNVRGAAKIAEV 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
               P L  ++ GDCLLK+ GA   A+ L  N   LE ++L  NEI+  GGL LV A++N
Sbjct: 256 FEHTPLLREIDFGDCLLKTDGAYHFAEALEQNHEHLEVLDLGFNEINYDGGLALVTAVQN 315

Query: 121 KTKLKQINVSENQFGEEG----VEEMEK 144
           K KL+  N+  N FG+ G    VE+M K
Sbjct: 316 KPKLRIFNLDGNCFGQAGSAQIVEQMAK 343


>gi|351710321|gb|EHB13240.1| Ran GTPase-activating protein 1 [Heterocephalus glaber]
          Length = 584

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 122/247 (49%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEGLLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TL  V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLREVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E++++++  
Sbjct: 288 IRGALPKLKELNLSFCEIKRDAALAVAEAMADKAELERLDLNGNALGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TL  V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLREVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGALPKLKELNLSFCEIKRDAALAVAEAMAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KAELERLDLNGNALGEEGCEQLQEVLDGFNMAKVL 354


>gi|345776899|ref|XP_538355.3| PREDICTED: ran GTPase-activating protein 1 [Canis lupus familiaris]
          Length = 587

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 122/247 (49%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L    ++N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E++++++  
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMARVL 354



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L    ++N GDCL++S GA +IA+ +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++  F MA  L
Sbjct: 320 KAELEKLDLNGNMLGEEGCEQLQEVLDGFNMARVL 354


>gi|355678613|gb|AER96159.1| chondroadherin [Mustela putorius furo]
          Length = 372

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA  + + L  L  + ++N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAAAMAKTLKTLRQVEVINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +KT+L++++++ N  GEEG E +++++  
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKTELEKLDLNGNILGEEGCERLQEVLDG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FSMAKVL 354



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA  + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAAAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA+ +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           KT+L++++++ N  GEEG E +++++  F MA  L
Sbjct: 320 KTELEKLDLNGNILGEEGCERLQEVLDGFSMAKVL 354


>gi|349501086|ref|NP_001231784.1| RAN GTPase activating protein 1 [Rattus norvegicus]
 gi|149065835|gb|EDM15708.1| rCG59652, isoform CRA_b [Rattus norvegicus]
          Length = 586

 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 121/247 (48%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E++++++ S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVLDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++ SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVLDSFNMAKVL 354


>gi|51858739|gb|AAH82056.1| RAN GTPase activating protein 1 [Rattus norvegicus]
          Length = 431

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 121/247 (48%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KG + + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +A+ +K +L++++++ N  GEEG E++++++ S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVLDS 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAKVL 354



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E++++++ SF MA  L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVLDSFNMAKVL 354


>gi|345317759|ref|XP_001509116.2| PREDICTED: ran GTPase-activating protein 1 [Ornithorhynchus
           anatinus]
          Length = 587

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 172/247 (69%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA LVELDLSDNAFGP GV+G   LL+SS C+ L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAHLVELDLSDNAFGPDGVQGFEALLKSSACYTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S + G PLALKVF+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSELGKPLALKVFVAGRNRLENDGATALAEAFGNIGTLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  +  LR +NLNDNT T KGA+ + + L  L  +  +N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAISPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEAINFGDCLVRSKGAVAIAEA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L L +A ++K++L++++++ N  GEEG E+++++++ 
Sbjct: 288 VKMGLHKLKELNLSFCEIKRDAALVLAEAAEDKSELEKLDLNGNALGEEGCEQLQEILEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FNMAHVL 354



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  +  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGNIGTLEEVHMPQNGINHPGITALAQAFAISPLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  +  +N GDCL++S GA +IA+ +      L+++NL+  EI     L L +A ++
Sbjct: 260 LKTLRQVEAINFGDCLVRSKGAVAIAEAVKMGLHKLKELNLSFCEIKRDAALVLAEAAED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K++L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KSELEKLDLNGNALGEEGCEQLQEILEGFNMAHVL 354



 Score = 38.1 bits (87), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 51/98 (52%)

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L K  +L +   G   L++ GA+++A+   +  TLE+V++  N I+  G   L +A    
Sbjct: 176 LGKPLALKVFVAGRNRLENDGATALAEAFGNIGTLEEVHMPQNGINHPGITALAQAFAIS 235

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
             L+ IN+++N F E+G   M + +K+     A+   D
Sbjct: 236 PLLRVINLNDNTFTEKGAVAMAETLKTLRQVEAINFGD 273


>gi|195119009|ref|XP_002004024.1| GI18223 [Drosophila mojavensis]
 gi|193914599|gb|EDW13466.1| GI18223 [Drosophila mojavensis]
          Length = 602

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/247 (48%), Positives = 166/247 (67%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L  LDLSDNA GP G+ GL   LRS  C++L+EL LNN GLG  G ++LS AL 
Sbjct: 109 IAAGAKLTVLDLSDNALGPNGMTGLEKFLRSPVCYSLQELYLNNCGLGPEGGRMLSIALI 168

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D ++++K+ G+PL L+VF+AGRNRLEN GAK L+  FK L+TLE + +PQN IYHVG+ A
Sbjct: 169 DLHKNAKEAGTPLQLRVFVAGRNRLENAGAKALSKTFKVLQTLEEITIPQNSIYHVGVAA 228

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ +F++N +LR LN+NDNT+  +GA  + +     P L  +N GDCLLK+ GA   A+ 
Sbjct: 229 LASSFKQNPHLRILNMNDNTLGVRGAAKIAEVFEHTPLLREINFGDCLLKTDGAYHFAEA 288

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L  N   LE ++L  N+I+  GGL LV A+++K KL+  N+  N FG+ G E++   M  
Sbjct: 289 LEQNHEQLELLDLGFNDINYDGGLVLVTAVQHKPKLRVFNLDGNCFGQHGSEQIVAQMAK 348

Query: 460 FGMAAAL 466
              AAAL
Sbjct: 349 CKNAAAL 355



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  FK L+TLE + +PQN IYHVG+ AL+ +F++N  LR LN+NDNT+  +GA  + + 
Sbjct: 201 LSKTFKVLQTLEEITIPQNSIYHVGVAALASSFKQNPHLRILNMNDNTLGVRGAAKIAEV 260

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
               P L  +N GDCLLK+ GA   A+ L  N   LE ++L  N+I+  GGL LV A+++
Sbjct: 261 FEHTPLLREINFGDCLLKTDGAYHFAEALEQNHEQLELLDLGFNDINYDGGLVLVTAVQH 320

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K KL+  N+  N FG+ G E++   M     AAAL
Sbjct: 321 KPKLRVFNLDGNCFGQHGSEQIVAQMAKCKNAAAL 355


>gi|195484460|ref|XP_002090704.1| GE13255 [Drosophila yakuba]
 gi|194176805|gb|EDW90416.1| GE13255 [Drosophila yakuba]
          Length = 591

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/244 (51%), Positives = 163/244 (66%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA+L  LDLSDNA GP G+ GL + LRS  C++L+EL L N GLG  G ++LSKAL D +
Sbjct: 109 GAKLTVLDLSDNALGPNGMRGLEEFLRSPVCYSLQELLLYNCGLGPEGGRMLSKALIDLH 168

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            ++ K G PL L+VFI  RNRLEN GA  LAA FK LKT E + + QN IY  G+ ALS+
Sbjct: 169 ANANKAGFPLQLRVFIGSRNRLENTGAMALAAAFKTLKTFEEIVLEQNSIYFDGVEALSE 228

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           +F+EN +LR LN+NDNT+  +GA  + + L  LP L  L+LGDCL+K+ GA    + L +
Sbjct: 229 SFKENPHLRVLNMNDNTVKSQGAEKIAEVLPYLPMLRELSLGDCLIKTNGAYHFGEVLES 288

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
            N  LE VNL+ NEI+  GGL LV AM+ K+KL+ +N+  N FG EG E++   M     
Sbjct: 289 ANDQLEVVNLSFNEINSDGGLVLVNAMRKKSKLRILNLDGNSFGLEGSEQIIHEMNKLPT 348

Query: 463 AAAL 466
           AAAL
Sbjct: 349 AAAL 352



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 108/181 (59%), Gaps = 13/181 (7%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK LKT E + + QN IY  G+ ALS++F+EN  LR LN+NDNT+  +GA  + + 
Sbjct: 198 LAAAFKTLKTFEEIVLEQNSIYFDGVEALSESFKENPHLRVLNMNDNTVKSQGAEKIAEV 257

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  L+LGDCL+K+ GA    + L + N  LE VNL+ NEI+  GGL LV AM+ 
Sbjct: 258 LPYLPMLRELSLGDCLIKTNGAYHFGEVLESANDQLEVVNLSFNEINSDGGLVLVNAMRK 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           K+KL+ +N+  N FG EG E++   M     AAAL            +  EE   END D
Sbjct: 318 KSKLRILNLDGNSFGLEGSEQIIHEMNKLPTAAAL------------QPFEEINSENDDD 365

Query: 181 A 181
           +
Sbjct: 366 S 366


>gi|126338709|ref|XP_001363897.1| PREDICTED: ran GTPase-activating protein 1 [Monodelphis domestica]
          Length = 572

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/254 (50%), Positives = 177/254 (69%), Gaps = 2/254 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L+ELKLNN GLGI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLQELKLNNCGLGIGGGKILAAALM 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S   G PLALKVF+AGRNRLEN+GA  LA  F  + TLE + MPQNGI H G+TA
Sbjct: 168 ECHRKSSATGKPLALKVFVAGRNRLENDGATALAEAFGTIGTLEEIHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAVNSLLRVINLNDNTFTEKGAVAMAKTLKALRQVEVINFGDCLVRSRGALAIAEA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + +    L+++NL+  EI     L + +A+++K+ L++++++ N  GEEG E+++++++ 
Sbjct: 288 VKEGLHRLKELNLSFCEIKRDAALAIGEAVEDKSDLEKLDLNGNALGEEGCEQLQEILEG 347

Query: 460 FGMAAALV-LEDDE 472
           F M   LV L DDE
Sbjct: 348 FNMVHTLVSLSDDE 361



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 109/164 (66%), Gaps = 2/164 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE + MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGTIGTLEEIHMPQNGINHPGVTALAQAFAVNSLLRVINLNDNTFTEKGAVAMAKT 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA+ + +    L+++NL+  EI     L + +A+++
Sbjct: 260 LKALRQVEVINFGDCLVRSRGALAIAEAVKEGLHRLKELNLSFCEIKRDAALAIGEAVED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDDEGE 163
           K+ L++++++ N  GEEG E+++++++ F M   LV L DDEG+
Sbjct: 320 KSDLEKLDLNGNALGEEGCEQLQEILEGFNMVHTLVSLSDDEGD 363



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 48/89 (53%)

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A  K  +L +   G   L++ GA+++A+      TLE++++  N I+  G   L +A   
Sbjct: 175 ATGKPLALKVFVAGRNRLENDGATALAEAFGTIGTLEEIHMPQNGINHPGVTALAQAFAV 234

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSF 149
            + L+ IN+++N F E+G   M K +K+ 
Sbjct: 235 NSLLRVINLNDNTFTEKGAVAMAKTLKAL 263


>gi|395540684|ref|XP_003772282.1| PREDICTED: ran GTPase-activating protein 1 [Sarcophilus harrisii]
          Length = 581

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/247 (49%), Positives = 174/247 (70%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+SS CF L+ELKLNN GLGI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLQELKLNNCGLGIGGGKILASALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F  + TLE + MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGAMALAEAFGSIGTLEEIHMPQNGINHPGVTA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA+ 
Sbjct: 228 LAQAFAGNSLLRVINLNDNTFTEKGAVAMAETLKILRQVEVINFGDCLVRSRGALAIAEA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + +    L+++NL+  EI     L + +A+++K+ L++++++ N  GEEG E+++++++ 
Sbjct: 288 VKEGLHRLKELNLSFCEIKRDAALAIAEAVEDKSDLEKLDLNGNALGEEGCEQLQEILEG 347

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 348 FSMAHTL 354



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 103/155 (66%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE + MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 200 LAEAFGSIGTLEEIHMPQNGINHPGVTALAQAFAGNSLLRVINLNDNTFTEKGAVAMAET 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA+ + +    L+++NL+  EI     L + +A+++
Sbjct: 260 LKILRQVEVINFGDCLVRSRGALAIAEAVKEGLHRLKELNLSFCEIKRDAALAIAEAVED 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K+ L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 320 KSDLEKLDLNGNALGEEGCEQLQEILEGFSMAHTL 354


>gi|198433674|ref|XP_002128833.1| PREDICTED: similar to Ran GTPase activating protein 1 [Ciona
           intestinalis]
          Length = 573

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/254 (50%), Positives = 178/254 (70%), Gaps = 3/254 (1%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           + + ARLVELDLSDNAFGP   +   +LL+S   F L+ LK NNNGLG  G  +L++ L 
Sbjct: 112 ITSKARLVELDLSDNAFGPDCAKACVELLKSPSAFTLQILKFNNNGLGGGG-IILAQTLI 170

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +CYE S  EG PL LKVF+AGRNRLEN GAK LA  FK + TLE +++PQNGI H GITA
Sbjct: 171 ECYEKSSAEGKPLKLKVFVAGRNRLENPGAKALAKAFKTIGTLEEIQLPQNGIQHAGITA 230

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+DA + + +LRHLNLNDNT T KGAI + +A+  + SL I+N GDCL+++ GA +I K 
Sbjct: 231 LADAVKHSPSLRHLNLNDNTFTDKGAISMAEAMKHIDSLEIVNFGDCLVRTNGAKAIGKS 290

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L D N  L+++ L+  EI ++GG+ +   ++NK  L++++++ N+FGEEGV+E++     
Sbjct: 291 LEDSNPNLKELLLSFGEIQLEGGIAICNGLENKEFLQKLDLNGNKFGEEGVDEVKDRAND 350

Query: 460 FGMAAALV-LEDDE 472
           F    AL  L+DDE
Sbjct: 351 FCCKNALTSLDDDE 364



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/186 (45%), Positives = 126/186 (67%), Gaps = 3/186 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK + TLE +++PQNGI H GITAL+DA + +  LRHLNLNDNT T KGAI + +A
Sbjct: 203 LAKAFKTIGTLEEIQLPQNGIQHAGITALADAVKHSPSLRHLNLNDNTFTDKGAISMAEA 262

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  + SL I+N GDCL+++ GA +I K L D N  L+++ L+  EI ++GG+ +   ++N
Sbjct: 263 MKHIDSLEIVNFGDCLVRTNGAKAIGKSLEDSNPNLKELLLSFGEIQLEGGIAICNGLEN 322

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDDEGECSD-EEQDEESEEEND 178
           K  L++++++ N+FGEEGV+E++     F    AL  L+DDEG  SD +E+D   E++ND
Sbjct: 323 KEFLQKLDLNGNKFGEEGVDEVKDRANDFCCKNALTSLDDDEGIDSDSDEEDSCGEDDND 382

Query: 179 SDAEGD 184
             +  D
Sbjct: 383 GRSPED 388



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L +   G   L++ GA ++AK      TLE++ L  N I   G   L  A+K+   L+ +
Sbjct: 185 LKVFVAGRNRLENPGAKALAKAFKTIGTLEEIQLPQNGIQHAGITALADAVKHSPSLRHL 244

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           N+++N F ++G   M + MK
Sbjct: 245 NLNDNTFTDKGAISMAEAMK 264


>gi|449283301|gb|EMC89978.1| Ran GTPase-activating protein 1 [Columba livia]
          Length = 560

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 118/247 (47%), Positives = 167/247 (67%), Gaps = 10/247 (4%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  C+ L+ELKLNN G+GI G K+L     
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSHACYTLQELKLNNCGMGIGGGKILE---- 163

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                S  +G PLALK+F+AGRNRLEN+GA  LA  F  + TLE V MPQNGI H GITA
Sbjct: 164 -----SSAQGKPLALKIFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITA 218

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  L+ +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 219 LAQAFAINPLLKVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLVRSKGAVAIADA 278

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + +    L+++NL+  EI     L + +A+++K +L++++++ N  GEEG E+++++++ 
Sbjct: 279 VKEGLHKLKELNLSFCEIKRDAALTVAEAIEDKAELEKLDLNGNCLGEEGCEQLQEILEG 338

Query: 460 FGMAAAL 466
           F MAA L
Sbjct: 339 FNMAAVL 345



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 103/155 (66%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H GITAL+ AF  N  L+ +NLNDNT T KGA+ + + 
Sbjct: 191 LAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINPLLKVINLNDNTFTEKGAVAMAET 250

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  + +    L+++NL+  EI     L + +A+++
Sbjct: 251 LKALRQVEVINFGDCLVRSKGAVAIADAVKEGLHKLKELNLSFCEIKRDAALTVAEAIED 310

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MAA L
Sbjct: 311 KAELEKLDLNGNCLGEEGCEQLQEILEGFNMAAVL 345


>gi|432870737|ref|XP_004071823.1| PREDICTED: ran GTPase-activating protein 1-like [Oryzias latipes]
          Length = 580

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/244 (49%), Positives = 175/244 (71%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GARL  LDLSDNAFGP GV+G+  LL+S+ C+ L+EL+LNN G+GI G K+L+ +L  C+
Sbjct: 111 GARLTVLDLSDNAFGPDGVKGIEKLLKSTSCYTLQELRLNNCGMGIGGGKILAASLMHCH 170

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           + S  E +PL+LKVF+AGRNRLEN+GA  LA  F+ + TLE V MPQNGI H G+TAL+ 
Sbjct: 171 QKSSAEKTPLSLKVFVAGRNRLENDGAAALAQAFQLIGTLEEVHMPQNGINHPGVTALAS 230

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A ++N  LR LNLNDNT T KGA+ + QAL  L S+ ++N GDCL++ AGA +IA+ +T+
Sbjct: 231 AMQQNPQLRILNLNDNTFTEKGALAMAQALKHLHSIQVINFGDCLVRPAGAKAIAEAVTE 290

Query: 404 N-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
               L ++NL+  EI+ +  L L  A+K+K +L++++++ N  GE+G + ++++M+   M
Sbjct: 291 GLPALMELNLSFGEITEEAALALAHAVKDKEQLQRLDLNGNCLGEDGCKALKEVMEGMNM 350

Query: 463 AAAL 466
              L
Sbjct: 351 GQLL 354



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 101/146 (69%), Gaps = 1/146 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE V MPQNGI H G+TAL+ A ++N +LR LNLNDNT T KGA+ + QAL  L S+ +
Sbjct: 209 TLEEVHMPQNGINHPGVTALASAMQQNPQLRILNLNDNTFTEKGALAMAQALKHLHSIQV 268

Query: 71  LNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           +N GDCL++ AGA +IA+ +T+    L ++NL+  EI+ +  L L  A+K+K +L+++++
Sbjct: 269 INFGDCLVRPAGAKAIAEAVTEGLPALMELNLSFGEITEEAALALAHAVKDKEQLQRLDL 328

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAAL 155
           + N  GE+G + ++++M+   M   L
Sbjct: 329 NGNCLGEDGCKALKEVMEGMNMGQLL 354


>gi|2623618|gb|AAB86471.1| GTPase activating protein RanGAP1 [Strongylocentrotus purpuratus]
          Length = 332

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 114/227 (50%), Positives = 159/227 (70%), Gaps = 2/227 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA LVE+DLSDNAFGP GV+ + +LL SS C++L E++ NNNGLGI G KL+++AL 
Sbjct: 107 MTAGAHLVEIDLSDNAFGPDGVKAVRELLESSSCYSLREMRFNNNGLGIGG-KLMAEALI 165

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C+E S K G PLALKVFIAGRNRLEN GA +LA  FK + TLE + +PQNGI + GITA
Sbjct: 166 TCHEKSTKAGKPLALKVFIAGRNRLENPGATVLAKAFKIIGTLEEIALPQNGINYEGITA 225

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L++A E + NL+ LNLNDNT T +GA P+ +A+  L  L ++N GDCL++S GA +IA  
Sbjct: 226 LAEAVEYSHNLKILNLNDNTFTARGAKPMAKAIKNLSKLEVINFGDCLVRSEGADAIANS 285

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
           L +   +L+++NL   EI  +  + + ++M  K  L  ++++ N  G
Sbjct: 286 LREGVPSLKELNLAFGEIKKEAAVRVAESMDTKPHLTLLDLNGNNIG 332



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 1/136 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA  FK + TLE + +PQNGI + GITAL++A E +  L+ LNLNDNT T +GA P+ +
Sbjct: 197 VLAKAFKIIGTLEEIALPQNGINYEGITALAEAVEYSHNLKILNLNDNTFTARGAKPMAK 256

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMK 119
           A+  L  L ++N GDCL++S GA +IA  L +   +L+++NL   EI  +  + + ++M 
Sbjct: 257 AIKNLSKLEVINFGDCLVRSEGADAIANSLREGVPSLKELNLAFGEIKKEAAVRVAESMD 316

Query: 120 NKTKLKQINVSENQFG 135
            K  L  ++++ N  G
Sbjct: 317 TKPHLTLLDLNGNNIG 332



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 20/222 (9%)

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
            C  ++ LKLN N +G+   + L+KAL    +  +   S +       GR R E   A M
Sbjct: 46  ACEGIQSLKLNGNTIGVEAAQALAKALESKPQFQRARWSDM-----FTGRLRSEIPPALM 100

Query: 313 L--AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKGAIP 368
              A +      L  +++  N     G+ A+ +  E +   +LR +  N+N +   G + 
Sbjct: 101 SLGAGIMTAGAHLVEIDLSDNAFGPDGVKAVRELLESSSCYSLREMRFNNNGLGIGGKL- 159

Query: 369 LGQAL----------SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           + +AL           K  +L +   G   L++ GA+ +AK      TLE++ L  N I+
Sbjct: 160 MAEALITCHEKSTKAGKPLALKVFIAGRNRLENPGATVLAKAFKIIGTLEEIALPQNGIN 219

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
            +G   L +A++    LK +N+++N F   G + M K +K+ 
Sbjct: 220 YEGITALAEAVEYSHNLKILNLNDNTFTARGAKPMAKAIKNL 261



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 13/150 (8%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQAL------- 62
           L  +++  N     G+ A+ +  E +    LR +  N+N +   G + + +AL       
Sbjct: 113 LVEIDLSDNAFGPDGVKAVRELLESSSCYSLREMRFNNNGLGIGGKL-MAEALITCHEKS 171

Query: 63  ---SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
               K  +L +   G   L++ GA+ +AK      TLE++ L  N I+ +G   L +A++
Sbjct: 172 TKAGKPLALKVFIAGRNRLENPGATVLAKAFKIIGTLEEIALPQNGINYEGITALAEAVE 231

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
               LK +N+++N F   G + M K +K+ 
Sbjct: 232 YSHNLKILNLNDNTFTARGAKPMAKAIKNL 261


>gi|194879550|ref|XP_001974254.1| GG21182 [Drosophila erecta]
 gi|190657441|gb|EDV54654.1| GG21182 [Drosophila erecta]
          Length = 591

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/244 (48%), Positives = 164/244 (67%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA+L  LDLSDNA GP G+ GL + LRS  C++L+EL L N GLG  G  +LSKAL D +
Sbjct: 109 GAKLTVLDLSDNALGPNGMRGLEEFLRSPVCYSLQELLLYNCGLGPEGGSMLSKALIDLH 168

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            ++ + GSPL L+VFI  RNRLEN+GA  LAA FK LKT E + + QN IY  G+ ALS+
Sbjct: 169 ANANEAGSPLQLRVFIGSRNRLENDGATALAAAFKTLKTFEEIVLEQNSIYFDGVKALSE 228

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           +F+EN +LR LN+NDNT+  +GA  + + L  +P L  L+ GDCL+K+ GA    + L +
Sbjct: 229 SFKENSHLRVLNMNDNTLKSRGAEKIAEVLPFVPMLRELSFGDCLIKTNGAYQFGEVLES 288

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
            N  LE ++L+ N+I+  GGL LV AM+NK+KL+ +N+  N FG +G +++   M     
Sbjct: 289 ANDQLEVIDLSFNDINSDGGLVLVNAMRNKSKLRFLNLDGNCFGHDGSKQIINEMNKLPT 348

Query: 463 AAAL 466
           AAAL
Sbjct: 349 AAAL 352



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK LKT E + + QN IY  G+ ALS++F+EN  LR LN+NDNT+  +GA  + + 
Sbjct: 198 LAAAFKTLKTFEEIVLEQNSIYFDGVKALSESFKENSHLRVLNMNDNTLKSRGAEKIAEV 257

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  +P L  L+ GDCL+K+ GA    + L + N  LE ++L+ N+I+  GGL LV AM+N
Sbjct: 258 LPFVPMLRELSFGDCLIKTNGAYQFGEVLESANDQLEVIDLSFNDINSDGGLVLVNAMRN 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K+KL+ +N+  N FG +G +++   M     AAAL
Sbjct: 318 KSKLRFLNLDGNCFGHDGSKQIINEMNKLPTAAAL 352


>gi|194761212|ref|XP_001962823.1| GF14235 [Drosophila ananassae]
 gi|190616520|gb|EDV32044.1| GF14235 [Drosophila ananassae]
          Length = 596

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/247 (48%), Positives = 164/247 (66%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+L  LDLSDNA GP G+ GL + LRS  C++L+EL L N GLG  G  +LSKAL 
Sbjct: 106 IAAGAKLTVLDLSDNALGPNGMRGLEEFLRSPVCYSLQELHLFNCGLGPEGGTMLSKALI 165

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D +++++K GSPL L+VFI GRNRLEN GAK ++  F+ LKTLE + + QN I++ GI +
Sbjct: 166 DLHDNAQKAGSPLQLRVFIGGRNRLENTGAKAMSNAFRTLKTLEEIVLLQNSIFYQGIIS 225

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+++F+EN +LR LNLNDN +  KGA  L + L  L  L  +N GDCL+K+ GA  + + 
Sbjct: 226 LAESFKENVHLRVLNLNDNILRPKGAAKLAEVLPYLTMLREINFGDCLMKTNGAYHLGEA 285

Query: 401 L-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L   N  LE ++L+ NEI+  GGL LV AMKNK KL+ +N+  N F  +G E++   M  
Sbjct: 286 LEASNEQLESIDLSFNEINSDGGLVLVGAMKNKPKLRYLNLDGNCFRSDGCEQVIAEMSK 345

Query: 460 FGMAAAL 466
              A AL
Sbjct: 346 LPNAKAL 352



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++  F+ LKTLE + + QN I++ GI +L+++F+EN  LR LNLNDN +  KGA  L + 
Sbjct: 198 MSNAFRTLKTLEEIVLLQNSIFYQGIISLAESFKENVHLRVLNLNDNILRPKGAAKLAEV 257

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  L  +N GDCL+K+ GA  + + L   N  LE ++L+ NEI+  GGL LV AMKN
Sbjct: 258 LPYLTMLREINFGDCLMKTNGAYHLGEALEASNEQLESIDLSFNEINSDGGLVLVGAMKN 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K KL+ +N+  N F  +G E++   M     A AL
Sbjct: 318 KPKLRYLNLDGNCFRSDGCEQVIAEMSKLPNAKAL 352


>gi|160773360|gb|AAI55268.1| Rangap1 protein [Danio rerio]
          Length = 576

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 119/243 (48%), Positives = 167/243 (68%), Gaps = 1/243 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           + +GARL +LDLSDNAFGP GV+G+ +LL+SS C+ L+EL+LNN G+G  G  +L+ AL 
Sbjct: 108 MTSGARLTQLDLSDNAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C++ S    SPL LKVFIAGRNRLEN+GA  LA  FK L +LE V MPQNGI H GITA
Sbjct: 168 ECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFKLLGSLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A + N NL+ LNLNDNT T KG+  + +A+  L  L  +N GDCL++S GA +IA  
Sbjct: 228 LAAALKHNPNLQVLNLNDNTFTTKGSKAMAEAIRHLQCLKAINFGDCLVRSEGAIAIAGA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L ++NL+  EI     + + KA++ K  L++++++ N FGE+G E +++ M+ 
Sbjct: 288 LREGLHLLRELNLSFGEICEAAAMVVAKAVQGKADLEKLDLNGNCFGEDGCEALKEAMEK 347

Query: 460 FGM 462
             M
Sbjct: 348 MNM 350



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 1/151 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK L +LE V MPQNGI H GITAL+ A + N  L+ LNLNDNT T KG+  + +A
Sbjct: 200 LAKAFKLLGSLEEVHMPQNGINHPGITALAAALKHNPNLQVLNLNDNTFTTKGSKAMAEA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L  +N GDCL++S GA +IA  L +    L ++NL+  EI     + + KA++ 
Sbjct: 260 IRHLQCLKAINFGDCLVRSEGAIAIAGALREGLHLLRELNLSFGEICEAAAMVVAKAVQG 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
           K  L++++++ N FGE+G E +++ M+   M
Sbjct: 320 KADLEKLDLNGNCFGEDGCEALKEAMEKMNM 350


>gi|47085695|ref|NP_998154.1| Ran GTPase activating protein 1b [Danio rerio]
 gi|32451805|gb|AAH54654.1| Ran GTPase activating protein 1 [Danio rerio]
          Length = 577

 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 119/243 (48%), Positives = 167/243 (68%), Gaps = 1/243 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           + +GARL +LDLSDNAFGP GV+G+ +LL+SS C+ L+EL+LNN G+G  G  +L+ AL 
Sbjct: 108 MTSGARLTQLDLSDNAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C++ S    SPL LKVFIAGRNRLEN+GA  LA  FK L +LE V MPQNGI H GITA
Sbjct: 168 ECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFKLLGSLEEVHMPQNGINHPGITA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A + N NL+ LNLNDNT T KG+  + +A+  L  L  +N GDCL++S GA +IA  
Sbjct: 228 LAAALKHNPNLQVLNLNDNTFTTKGSKAMAEAIRNLQCLKAINFGDCLVRSEGAIAIAGA 287

Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L ++NL+  EI     + + KA++ K  L++++++ N FGE+G E +++ M+ 
Sbjct: 288 LREGLHLLRELNLSFGEICEAAAMVVAKAVQGKADLEKLDLNGNCFGEDGCEALKEAMEK 347

Query: 460 FGM 462
             M
Sbjct: 348 MNM 350



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 1/151 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK L +LE V MPQNGI H GITAL+ A + N  L+ LNLNDNT T KG+  + +A
Sbjct: 200 LAKAFKLLGSLEEVHMPQNGINHPGITALAAALKHNPNLQVLNLNDNTFTTKGSKAMAEA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L  +N GDCL++S GA +IA  L +    L ++NL+  EI     + + KA++ 
Sbjct: 260 IRNLQCLKAINFGDCLVRSEGAIAIAGALREGLHLLRELNLSFGEICEAAAMVVAKAVQG 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
           K  L++++++ N FGE+G E +++ M+   M
Sbjct: 320 KADLEKLDLNGNCFGEDGCEALKEAMEKMNM 350


>gi|410895841|ref|XP_003961408.1| PREDICTED: ran GTPase-activating protein 1-like [Takifugu rubripes]
          Length = 550

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 112/244 (45%), Positives = 167/244 (68%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G RL ELDLSDNAFGP GV+G+  LL+S  C  L ELKLNN G+G+ G K+L++AL +C+
Sbjct: 111 GVRLTELDLSDNAFGPDGVKGIERLLKSPSCHTLRELKLNNCGMGVGGGKILAEALIECH 170

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
             S + G+P  L+VF+AGRNRLENEGA+ LA  F+ + +LE V MPQNGI H G+ AL+ 
Sbjct: 171 RRSTEVGAPFRLRVFVAGRNRLENEGARALAKAFQLIGSLEEVHMPQNGINHAGVVALAS 230

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A   N+ LR LN NDNT T KG + + +AL+ L SL ++N GDCL++S GA ++A  + +
Sbjct: 231 AMRHNRELRVLNFNDNTFTKKGTLAMAKALTHLRSLQVVNFGDCLVRSEGAIALAAVIRE 290

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
               L+++NL+  EI+    L + +A+ +K ++++++++ N  GE+G E + ++M+    
Sbjct: 291 GVPVLKELNLSYGEITEAAALVVARAVMDKPQMERLDLNGNCLGEDGCEALREVMEEMDK 350

Query: 463 AAAL 466
           A  L
Sbjct: 351 ADML 354



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + +LE V MPQNGI H G+ AL+ A   N++LR LN NDNT T KG + + +A
Sbjct: 200 LAKAFQLIGSLEEVHMPQNGINHAGVVALASAMRHNRELRVLNFNDNTFTKKGTLAMAKA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L+ L SL ++N GDCL++S GA ++A  + +    L+++NL+  EI+    L + +A+ +
Sbjct: 260 LTHLRSLQVVNFGDCLVRSEGAIALAAVIREGVPVLKELNLSYGEITEAAALVVARAVMD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K ++++++++ N  GE+G E + ++M+    A  L
Sbjct: 320 KPQMERLDLNGNCLGEDGCEALREVMEEMDKADML 354



 Score = 38.1 bits (87), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKL---------P-SLAILNLGDCLLKSAGASSIAKY 89
           LR L LN+  +   G   L +AL +          P  L +   G   L++ GA ++AK 
Sbjct: 144 LRELKLNNCGMGVGGGKILAEALIECHRRSTEVGAPFRLRVFVAGRNRLENEGARALAKA 203

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
                +LE+V++  N I+  G + L  AM++  +L+ +N ++N F ++G   M K
Sbjct: 204 FQLIGSLEEVHMPQNGINHAGVVALASAMRHNRELRVLNFNDNTFTKKGTLAMAK 258


>gi|432921807|ref|XP_004080233.1| PREDICTED: ran GTPase-activating protein 1-like [Oryzias latipes]
          Length = 577

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 113/239 (47%), Positives = 167/239 (69%), Gaps = 1/239 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GARL ELDLSDNAFGP GV+G+  LL+S+ C +L+EL+LNN G+GI G K+L++AL 
Sbjct: 115 MGAGARLTELDLSDNAFGPDGVKGIEQLLKSASCHSLKELRLNNCGMGIGGGKILAEALT 174

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           + +  S   G+PL L+VF+AGRNRLENEGA  LA  FK + +LE V +PQNGI H G+TA
Sbjct: 175 EGHRRSSALGAPLRLRVFMAGRNRLENEGASALAKAFKLIGSLEEVHLPQNGINHAGVTA 234

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A  +N  LR +NLNDNT T +GA+ +  AL  L ++ ++N GDCL++S GA ++A  
Sbjct: 235 LAAAMRQNPELRVVNLNDNTFTRRGALAMAHALRPLRNVQVINFGDCLVRSEGAVALAAV 294

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +   TL +VNL+  EI+    + + +A+ +K  +++++++ N  GE+G E +  LM+
Sbjct: 295 LREGLPTLREVNLSFGEITEAAAMAVAQAVADKPSMEKVDLNGNCLGEDGCEALRDLME 353



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 97/147 (65%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK + +LE V +PQNGI H G+TAL+ A  +N +LR +NLNDNT T +GA+ +  A
Sbjct: 207 LAKAFKLIGSLEEVHLPQNGINHAGVTALAAAMRQNPELRVVNLNDNTFTRRGALAMAHA 266

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L ++ ++N GDCL++S GA ++A  L +   TL +VNL+  EI+    + + +A+ +
Sbjct: 267 LRPLRNVQVINFGDCLVRSEGAVALAAVLREGLPTLREVNLSFGEITEAAAMAVAQAVAD 326

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  +++++++ N  GE+G E +  LM+
Sbjct: 327 KPSMEKVDLNGNCLGEDGCEALRDLME 353



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 10/120 (8%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSK---------LP-SLAILNLGDCLLKSAGASSIAKY 89
           L+ L LN+  +   G   L +AL++          P  L +   G   L++ GAS++AK 
Sbjct: 151 LKELRLNNCGMGIGGGKILAEALTEGHRRSSALGAPLRLRVFMAGRNRLENEGASALAKA 210

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
                +LE+V+L  N I+  G   L  AM+   +L+ +N+++N F   G   M   ++  
Sbjct: 211 FKLIGSLEEVHLPQNGINHAGVTALAAAMRQNPELRVVNLNDNTFTRRGALAMAHALRPL 270


>gi|348502381|ref|XP_003438746.1| PREDICTED: ran GTPase-activating protein 1-like [Oreochromis
           niloticus]
          Length = 577

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/241 (47%), Positives = 165/241 (68%), Gaps = 1/241 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GARL ELDLSDNAFGP GV+G+  LL+S  C  L ELKLNN G+GI G K+L++AL 
Sbjct: 108 MGAGARLTELDLSDNAFGPDGVKGIEQLLKSPSCHTLRELKLNNCGMGIGGGKILAEALI 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S   G+PL L+VFIAGRNRLENEGA  LA  F+ L +LE + MPQNGI + G+ A
Sbjct: 168 ECHRQSSSLGAPLRLRVFIAGRNRLENEGASALAKAFQLLGSLEEIHMPQNGINYSGVMA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A   N  LR LNLNDNT T KG++ + QAL  L ++ ++N GDCL++S GA ++A  
Sbjct: 228 LASAIRHNPELRVLNLNDNTFTKKGSLAMAQALRHLRNIQVINFGDCLVRSEGAVALAAV 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L +    L+++NL+  EI+    L + +A+ +K  +++++++ N  GEEG E + + M++
Sbjct: 288 LREGLPILKELNLSFGEITEAAALVVAQAVADKADMEKLDLNGNCLGEEGCEALREAMEN 347

Query: 460 F 460
            
Sbjct: 348 M 348



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 97/149 (65%), Gaps = 1/149 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ L +LE + MPQNGI + G+ AL+ A   N +LR LNLNDNT T KG++ + QA
Sbjct: 200 LAKAFQLLGSLEEIHMPQNGINYSGVMALASAIRHNPELRVLNLNDNTFTKKGSLAMAQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L ++ ++N GDCL++S GA ++A  L +    L+++NL+  EI+    L + +A+ +
Sbjct: 260 LRHLRNIQVINFGDCLVRSEGAVALAAVLREGLPILKELNLSFGEITEAAALVVAQAVAD 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           K  +++++++ N  GEEG E + + M++ 
Sbjct: 320 KADMEKLDLNGNCLGEEGCEALREAMENM 348



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 31/222 (13%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHD------CYESSKKEGSPLALKVFIAGRNRLENEGA 310
           L  L+L  N LG+   + ++KAL +      CY S               GR R E   A
Sbjct: 51  LRALRLEGNTLGVEAAQAIAKALENKDMLQRCYWSD-----------MFTGRLRSEIPPA 99

Query: 311 --KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKGA 366
              M +AV      L  +++  N     G+  +    +      LR L LN+  +   G 
Sbjct: 100 LRSMGSAVMGAGARLTELDLSDNAFGPDGVKGIEQLLKSPSCHTLRELKLNNCGMGIGGG 159

Query: 367 IPLGQAL-------SKLPS---LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             L +AL       S L +   L +   G   L++ GAS++AK      +LE++++  N 
Sbjct: 160 KILAEALIECHRQSSSLGAPLRLRVFIAGRNRLENEGASALAKAFQLLGSLEEIHMPQNG 219

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           I+  G + L  A+++  +L+ +N+++N F ++G   M + ++
Sbjct: 220 INYSGVMALASAIRHNPELRVLNLNDNTFTKKGSLAMAQALR 261



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 10/118 (8%)

Query: 40  LRHLNLNDNTITYKGAIPLGQAL-------SKLPS---LAILNLGDCLLKSAGASSIAKY 89
           LR L LN+  +   G   L +AL       S L +   L +   G   L++ GAS++AK 
Sbjct: 144 LRELKLNNCGMGIGGGKILAEALIECHRQSSSLGAPLRLRVFIAGRNRLENEGASALAKA 203

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
                +LE++++  N I+  G + L  A+++  +L+ +N+++N F ++G   M + ++
Sbjct: 204 FQLLGSLEEIHMPQNGINYSGVMALASAIRHNPELRVLNLNDNTFTKKGSLAMAQALR 261


>gi|47208732|emb|CAF93384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 595

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/244 (49%), Positives = 158/244 (64%), Gaps = 28/244 (11%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GARL  LDLSDNAFGP GV+G+  LL+SS CF L+EL+LNN G+GI G K+L+ +L +CY
Sbjct: 111 GARLAILDLSDNAFGPDGVKGIEKLLKSSACFTLQELRLNNCGMGIGGGKILAASLIECY 170

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           + S KEG PL+LKVF+AGRNRLEN+GA  LA  F+ + +LE V MPQNGI + GITAL+ 
Sbjct: 171 KKSSKEGDPLSLKVFVAGRNRLENDGATALAQAFQMMGSLEEVHMPQNGINYPGITALAT 230

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A + N  LR LNLNDNT T KGA+ + QAL  L S+ ++N GDCL++ +GA +IA+    
Sbjct: 231 AMQHNAGLRILNLNDNTFTEKGAVAMAQALKHLNSIQVINFGDCLVRPSGAVAIAE---- 286

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS-ENQFGEEGVEEMEKLMKSFGM 462
                         S+  GL +         LK++N+S  N  GE+G   +   M+S  M
Sbjct: 287 --------------SISEGLPI---------LKELNLSFGNCLGEDGCRALVDSMESMNM 323

Query: 463 AAAL 466
           A  L
Sbjct: 324 ADVL 327



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 86/155 (55%), Gaps = 28/155 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + +LE V MPQNGI + GITAL+ A + N  LR LNLNDNT T KGA+ + QA
Sbjct: 200 LAQAFQMMGSLEEVHMPQNGINYPGITALATAMQHNAGLRILNLNDNTFTEKGAVAMAQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L  L S+ ++N GDCL++ +GA +IA+                  S+  GL +       
Sbjct: 260 LKHLNSIQVINFGDCLVRPSGAVAIAE------------------SISEGLPI------- 294

Query: 122 TKLKQINVS-ENQFGEEGVEEMEKLMKSFGMAAAL 155
             LK++N+S  N  GE+G   +   M+S  MA  L
Sbjct: 295 --LKELNLSFGNCLGEDGCRALVDSMESMNMADVL 327



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 46/81 (56%)

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
           SL +   G   L++ GA+++A+      +LE+V++  N I+  G   L  AM++   L+ 
Sbjct: 181 SLKVFVAGRNRLENDGATALAQAFQMMGSLEEVHMPQNGINYPGITALATAMQHNAGLRI 240

Query: 127 INVSENQFGEEGVEEMEKLMK 147
           +N+++N F E+G   M + +K
Sbjct: 241 LNLNDNTFTEKGAVAMAQALK 261


>gi|317419169|emb|CBN81206.1| Ran GTPase-activating protein 1 [Dicentrarchus labrax]
          Length = 569

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 112/241 (46%), Positives = 163/241 (67%), Gaps = 1/241 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GARL ELDLSDNAFGP GV+G+  LL+S  C  L ELKLNN G+GI G K+L++AL 
Sbjct: 108 MSAGARLTELDLSDNAFGPDGVKGIEQLLKSPSCHTLRELKLNNCGMGIGGGKILAEALI 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C+  S   G+PL L+VFIAGRNRLENEGA+ LA  F+ + +LE V MPQNGI + G+ A
Sbjct: 168 ECHRQSSAHGAPLKLRVFIAGRNRLENEGARALAKAFQLMGSLEEVHMPQNGINYAGVMA 227

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A   N  LR LN NDNT T KG + + QAL  L ++ ++N GDCL++S GA ++A  
Sbjct: 228 LASAMRHNPELRVLNFNDNTFTKKGTLAMAQALRHLRNVQVINFGDCLVRSEGAIALAAV 287

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + +    L+++NL+  EI+    L + +A+     +++++++ N  GEEG E + ++M++
Sbjct: 288 VREGLPILKELNLSFGEITEAAALVVAQAVTANPHMEKVDLNGNCLGEEGCEALREVMEN 347

Query: 460 F 460
            
Sbjct: 348 M 348



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 94/149 (63%), Gaps = 1/149 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + +LE V MPQNGI + G+ AL+ A   N +LR LN NDNT T KG + + QA
Sbjct: 200 LAKAFQLMGSLEEVHMPQNGINYAGVMALASAMRHNPELRVLNFNDNTFTKKGTLAMAQA 259

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L ++ ++N GDCL++S GA ++A  + +    L+++NL+  EI+    L + +A+  
Sbjct: 260 LRHLRNVQVINFGDCLVRSEGAIALAAVVREGLPILKELNLSFGEITEAAALVVAQAVTA 319

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSF 149
              +++++++ N  GEEG E + ++M++ 
Sbjct: 320 NPHMEKVDLNGNCLGEEGCEALREVMENM 348



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 10/118 (8%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKL---------P-SLAILNLGDCLLKSAGASSIAKY 89
           LR L LN+  +   G   L +AL +          P  L +   G   L++ GA ++AK 
Sbjct: 144 LRELKLNNCGMGIGGGKILAEALIECHRQSSAHGAPLKLRVFIAGRNRLENEGARALAKA 203

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
                +LE+V++  N I+  G + L  AM++  +L+ +N ++N F ++G   M + ++
Sbjct: 204 FQLMGSLEEVHMPQNGINYAGVMALASAMRHNPELRVLNFNDNTFTKKGTLAMAQALR 261


>gi|195438264|ref|XP_002067057.1| GK24798 [Drosophila willistoni]
 gi|194163142|gb|EDW78043.1| GK24798 [Drosophila willistoni]
          Length = 585

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 115/247 (46%), Positives = 163/247 (65%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           ++  A L  LDLSDNA GP G++GL   LRS  C++L+EL L+N GLG  G  +LS AL 
Sbjct: 104 IEAKAHLTVLDLSDNALGPNGMKGLETFLRSPVCYSLQELHLHNCGLGPEGGSMLSSALL 163

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D + ++KK G+PL L+VF+AGRNRLEN GA  LA  FK L+TLE + + QN IYH G++ 
Sbjct: 164 DLHANAKKAGTPLQLRVFVAGRNRLENVGAAALAKAFKVLQTLEEIVLMQNSIYHDGVSV 223

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+++F+ N +LR +N+NDNT   KGA  + +     P L  +N GDCL+K+ GA   A+ 
Sbjct: 224 LAESFKANTHLRVINMNDNTFAVKGAAKMAEVFEHTPLLREINFGDCLMKTDGAYHFAEA 283

Query: 401 LT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L  +N  LE V+L+ N+I+  GGL ++ AM++K KL  +N+  N FG EG  ++ +LM  
Sbjct: 284 LEGNNGNLEVVDLSFNDINSDGGLVIITAMQSKPKLTYLNLDGNCFGHEGCAQIIELMAK 343

Query: 460 FGMAAAL 466
            G  +AL
Sbjct: 344 NGNPSAL 350



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 97/155 (62%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK L+TLE + + QN IYH G++ L+++F+ N  LR +N+NDNT   KGA  + + 
Sbjct: 196 LAKAFKVLQTLEEIVLMQNSIYHDGVSVLAESFKANTHLRVINMNDNTFAVKGAAKMAEV 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
               P L  +N GDCL+K+ GA   A+ L  +N  LE V+L+ N+I+  GGL ++ AM++
Sbjct: 256 FEHTPLLREINFGDCLMKTDGAYHFAEALEGNNGNLEVVDLSFNDINSDGGLVIITAMQS 315

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K KL  +N+  N FG EG  ++ +LM   G  +AL
Sbjct: 316 KPKLTYLNLDGNCFGHEGCAQIIELMAKNGNPSAL 350



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L +   G   L++ GA+++AK      TLE++ L  N I   G   L ++ K  T L+ I
Sbjct: 178 LRVFVAGRNRLENVGAAALAKAFKVLQTLEEIVLMQNSIYHDGVSVLAESFKANTHLRVI 237

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGEC 164
           N+++N F  +G  +M ++ +       L+ E + G+C
Sbjct: 238 NMNDNTFAVKGAAKMAEVFEH----TPLLREINFGDC 270


>gi|240972673|ref|XP_002401157.1| Ran GTPase-activating protein, putative [Ixodes scapularis]
 gi|215490982|gb|EEC00623.1| Ran GTPase-activating protein, putative [Ixodes scapularis]
          Length = 527

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/250 (49%), Positives = 165/250 (66%), Gaps = 2/250 (0%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           ARL ELDLSDNAFGP+G+  L  LL S CCF L+ L LNNNGLG  G +LL+KAL  C  
Sbjct: 113 ARLTELDLSDNAFGPVGIGALVPLLSSPCCFQLKTLLLNNNGLGPGGAELLAKALGACLA 172

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
            S+K G+PL L+  + GRNRLEN GA  LAAV   + +LE + +PQNGI+H G+ AL+  
Sbjct: 173 ESRKAGTPLQLRTLVCGRNRLENVGATALAAVLADMGSLEELSLPQNGIFHEGVGALAKG 232

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              N NL  LNLNDN  T +GA  + QA+ +L  L +LN GDCL+K+AGA ++AK L   
Sbjct: 233 VAANPNLHLLNLNDNIFTPEGARQMAQAVRRLDKLEVLNFGDCLVKTAGAKALAKGLAGG 292

Query: 405 TT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 463
           ++ L +V L  N IS+ GGL LV+A+K++ +L+ + +  N+FG  GVE++E  M + G  
Sbjct: 293 SSPLREVQLGYNGISLSGGLALVEALKDRPQLEVLELDGNKFGTHGVEQLEAAMDAVGKL 352

Query: 464 AAL-VLEDDE 472
             L    DDE
Sbjct: 353 DKLCAFSDDE 362



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 2/163 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAAV   + +LE + +PQNGI+H G+ AL+     N  L  LNLNDN  T +GA  + QA
Sbjct: 201 LAAVLADMGSLEELSLPQNGIFHEGVGALAKGVAANPNLHLLNLNDNIFTPEGARQMAQA 260

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           + +L  L +LN GDCL+K+AGA ++AK L   ++ L +V L  N IS+ GGL LV+A+K+
Sbjct: 261 VRRLDKLEVLNFGDCLVKTAGAKALAKGLAGGSSPLREVQLGYNGISLSGGLALVEALKD 320

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEG 162
           + +L+ + +  N+FG  GVE++E  M + G    L    DDEG
Sbjct: 321 RPQLEVLELDGNKFGTHGVEQLEAAMDAVGKLDKLCAFSDDEG 363


>gi|442628395|ref|NP_001260579.1| Ran GTPase activating protein, isoform C [Drosophila melanogaster]
 gi|440213937|gb|AGB93114.1| Ran GTPase activating protein, isoform C [Drosophila melanogaster]
          Length = 588

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/244 (48%), Positives = 159/244 (65%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA+L  LDLSDNA GP G+ GL +LLRS  C++L+EL L N GLG  G  +LS+AL D +
Sbjct: 99  GAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLH 158

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            ++ K G PL L+VFI  RNRLE+ GA  +A  F+ LKT E + + QN IY  G+ AL++
Sbjct: 159 ANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAE 218

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           +F+ N +LR LN+NDNT+  +GA  + +AL  LP L  ++ GDCL+K+ GA    + L  
Sbjct: 219 SFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALER 278

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
            N  LE ++L  NEI+  GGL LV AM NK KL+ +N+  N FGEEG E++   M     
Sbjct: 279 GNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLPT 338

Query: 463 AAAL 466
           AAAL
Sbjct: 339 AAAL 342



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 3/180 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+ LKT E + + QN IY  G+ AL+++F+ N  LR LN+NDNT+  +GA  + +A
Sbjct: 188 MATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEA 247

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  ++ GDCL+K+ GA    + L   N  LE ++L  NEI+  GGL LV AM N
Sbjct: 248 LPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGN 307

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           K KL+ +N+  N FGEEG E++   M     AAA  L+  + +  ++ +DE   ++ D+D
Sbjct: 308 KPKLRILNLDGNSFGEEGSEKIISEMSKLPTAAA--LQPFQHQEEEDLEDEYQADKQDAD 365


>gi|17136452|ref|NP_476712.1| Ran GTPase activating protein, isoform A [Drosophila melanogaster]
 gi|442628393|ref|NP_001260578.1| Ran GTPase activating protein, isoform B [Drosophila melanogaster]
 gi|20455240|sp|Q9VIW3.1|RAGP1_DROME RecName: Full=Ran GTPase-activating protein; Short=RanGAP; AltName:
           Full=Protein segregation distorter
 gi|7298584|gb|AAF53801.1| Ran GTPase activating protein, isoform A [Drosophila melanogaster]
 gi|16769096|gb|AAL28767.1| LD16356p [Drosophila melanogaster]
 gi|220943294|gb|ACL84190.1| RanGap-PA [synthetic construct]
 gi|220953420|gb|ACL89253.1| RanGap-PA [synthetic construct]
 gi|440213936|gb|AGB93113.1| Ran GTPase activating protein, isoform B [Drosophila melanogaster]
          Length = 596

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/244 (48%), Positives = 159/244 (65%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA+L  LDLSDNA GP G+ GL +LLRS  C++L+EL L N GLG  G  +LS+AL D +
Sbjct: 107 GAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLH 166

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            ++ K G PL L+VFI  RNRLE+ GA  +A  F+ LKT E + + QN IY  G+ AL++
Sbjct: 167 ANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAE 226

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           +F+ N +LR LN+NDNT+  +GA  + +AL  LP L  ++ GDCL+K+ GA    + L  
Sbjct: 227 SFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALER 286

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
            N  LE ++L  NEI+  GGL LV AM NK KL+ +N+  N FGEEG E++   M     
Sbjct: 287 GNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLPT 346

Query: 463 AAAL 466
           AAAL
Sbjct: 347 AAAL 350



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 3/180 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+ LKT E + + QN IY  G+ AL+++F+ N  LR LN+NDNT+  +GA  + +A
Sbjct: 196 MATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEA 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  ++ GDCL+K+ GA    + L   N  LE ++L  NEI+  GGL LV AM N
Sbjct: 256 LPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGN 315

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           K KL+ +N+  N FGEEG E++   M     AAA  L+  + +  ++ +DE   ++ D+D
Sbjct: 316 KPKLRILNLDGNSFGEEGSEKIISEMSKLPTAAA--LQPFQHQEEEDLEDEYQADKQDAD 373


>gi|224976686|gb|ACN71313.1| Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976702|gb|ACN71321.1| Ran GTPase activating protein [Drosophila melanogaster]
          Length = 362

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/245 (48%), Positives = 159/245 (64%), Gaps = 1/245 (0%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
            GA+L  LDLSDNA GP G+ GL +LLRS  C++L+EL L N GLG  G  +LS+AL D 
Sbjct: 106 AGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDL 165

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           + ++ K G PL L+VFI  RNRLE+ GA  +A  F+ LKT E + + QN IY  G+ AL+
Sbjct: 166 HANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALA 225

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           ++F+ N +LR LN+NDNT+  +GA  + +AL  LP L  ++ GDCL+K+ GA    + L 
Sbjct: 226 ESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALE 285

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             N  LE ++L  NEI+  GGL LV AM NK KL+ +N+  N FGEEG E++   M    
Sbjct: 286 RGNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLP 345

Query: 462 MAAAL 466
            AAAL
Sbjct: 346 TAAAL 350



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+ LKT E + + QN IY  G+ AL+++F+ N  LR LN+NDNT+  +GA  + +A
Sbjct: 196 MATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEA 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  ++ GDCL+K+ GA    + L   N  LE ++L  NEI+  GGL LV AM N
Sbjct: 256 LPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGN 315

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K KL+ +N+  N FGEEG E++   M     AAAL
Sbjct: 316 KPKLRILNLDGNSFGEEGSEKIISEMSKLPTAAAL 350


>gi|224976688|gb|ACN71314.1| Ran GTPase activating protein [Drosophila melanogaster]
          Length = 362

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/245 (48%), Positives = 159/245 (64%), Gaps = 1/245 (0%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
            GA+L  LDLSDNA GP G+ GL +LLRS  C++L+EL L N GLG  G  +LS+AL D 
Sbjct: 106 AGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDL 165

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           + ++ K G PL L+VFI  RNRLE+ GA  +A  F+ LKT E + + QN IY  G+ AL+
Sbjct: 166 HANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALA 225

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           ++F+ N +LR LN+NDNT+  +GA  + +AL  LP L  ++ GDCL+K+ GA    + L 
Sbjct: 226 ESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALE 285

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             N  LE ++L  NEI+  GGL LV AM NK KL+ +N+  N FGEEG E++   M    
Sbjct: 286 RGNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLP 345

Query: 462 MAAAL 466
            AAAL
Sbjct: 346 TAAAL 350



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 103/172 (59%), Gaps = 6/172 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+ LKT E + + QN IY  G+ AL+++F+ N  LR LN+NDNT+  +GA  + +A
Sbjct: 196 MATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEA 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  ++ GDCL+K+ GA    + L   N  LE ++L  NEI+  GGL LV AM N
Sbjct: 256 LPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGN 315

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           K KL+ +N+  N FGEEG E++   M     AAAL    D+     EE+D E
Sbjct: 316 KPKLRILNLDGNSFGEEGSEKIISEMSKLPTAAALQPFQDQ-----EEEDLE 362


>gi|224976684|gb|ACN71312.1| Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976690|gb|ACN71315.1| Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976692|gb|ACN71316.1| Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976694|gb|ACN71317.1| Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976696|gb|ACN71318.1| Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976698|gb|ACN71319.1| Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976700|gb|ACN71320.1| Ran GTPase activating protein [Drosophila melanogaster]
          Length = 362

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/245 (48%), Positives = 158/245 (64%), Gaps = 1/245 (0%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
            GA+L  LDLSDNA GP G+ GL +LLRS  C++L+EL L N GLG  G  +LS+AL D 
Sbjct: 106 AGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDL 165

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           + ++ K G PL L+VFI  RNRLE+ GA  +A  F+ LKT E + + QN IY  G+ AL+
Sbjct: 166 HANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALA 225

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           ++F+ N +LR LN+NDNT+  +GA  + +AL  LP L  ++ GDCL+K+ GA    + L 
Sbjct: 226 ESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALE 285

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             N  LE ++L  NEI+  GGL LV AM NK KL+ +N+  N FGEEG E +   M    
Sbjct: 286 RGNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEMIISEMSKLP 345

Query: 462 MAAAL 466
            AAAL
Sbjct: 346 TAAAL 350



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 102/172 (59%), Gaps = 6/172 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+ LKT E + + QN IY  G+ AL+++F+ N  LR LN+NDNT+  +GA  + +A
Sbjct: 196 MATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEA 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  ++ GDCL+K+ GA    + L   N  LE ++L  NEI+  GGL LV AM N
Sbjct: 256 LPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGN 315

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           K KL+ +N+  N FGEEG E +   M     AAAL    D+     EE+D E
Sbjct: 316 KPKLRILNLDGNSFGEEGSEMIISEMSKLPTAAALQPFQDQ-----EEEDLE 362


>gi|224976748|gb|ACN71322.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976750|gb|ACN71323.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976752|gb|ACN71324.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976754|gb|ACN71325.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976756|gb|ACN71326.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976758|gb|ACN71327.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976760|gb|ACN71328.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976762|gb|ACN71329.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976764|gb|ACN71330.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976766|gb|ACN71331.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976768|gb|ACN71332.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
 gi|224976770|gb|ACN71333.1| Sd-Ran GTPase activating protein [Drosophila melanogaster]
          Length = 362

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/245 (48%), Positives = 158/245 (64%), Gaps = 1/245 (0%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
            GA+L  LDLSDNA GP G+ GL +LLRS  C++L+EL L N GLG  G  +LS+AL D 
Sbjct: 106 AGAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDL 165

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           + ++ K G PL L+VFI  RNRLE+ GA  +A  F+ LKT E + + QN IY  G+ AL+
Sbjct: 166 HANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALA 225

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           ++F+ N +LR LN+NDNT+  +GA  + +AL  LP L  ++ GDCL+K+ GA    + L 
Sbjct: 226 ESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALE 285

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             N  LE ++L  NEI+  GGL LV AM NK KL+ +N+  N FGEEG E +   M    
Sbjct: 286 RGNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEMIISEMSKLP 345

Query: 462 MAAAL 466
            AAAL
Sbjct: 346 TAAAL 350



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 102/172 (59%), Gaps = 6/172 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+ LKT E + + QN IY  G+ AL+++F+ N  LR LN+NDNT+  +GA  + +A
Sbjct: 196 MATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEA 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  ++ GDCL+K+ GA    + L   N  LE ++L  NEI+  GGL LV AM N
Sbjct: 256 LPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGN 315

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           K KL+ +N+  N FGEEG E +   M     AAAL    D+     EE+D E
Sbjct: 316 KPKLRILNLDGNSFGEEGSEMIISEMSKLPTAAALQPFQDQ-----EEEDLE 362


>gi|340381190|ref|XP_003389104.1| PREDICTED: ran GTPase-activating protein 1-like [Amphimedon
           queenslandica]
          Length = 559

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/244 (49%), Positives = 174/244 (71%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GARLVELDLSDNAFGP GVEG++ LL S  C+ L+ LK NNNGLGI G K+LSKAL  CY
Sbjct: 99  GARLVELDLSDNAFGPAGVEGVSTLLTSEVCYTLKILKFNNNGLGIGGGKILSKALLQCY 158

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           + + + G+  AL+VF +GRNRLEN+GA+ LA VF+ L +L  + MPQNGIY  GI+AL+ 
Sbjct: 159 QEASEVGAKFALEVFQSGRNRLENDGARALAEVFETLGSLVELSMPQNGIYCDGISALAR 218

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A ++N +LR LNL+DNT T  G+  +   +  L  L ++N G+CL++S GA +IA+ + D
Sbjct: 219 ALKKNPHLRVLNLSDNTFTEDGSALMADVIPSLQELEVINFGECLVRSKGAVAIAEAVKD 278

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
            +  L ++ L+ NE+ +  G  +V A+ NK++L  ++++ N FGEEGVE ++++M++ G+
Sbjct: 279 GHQMLRELWLSYNELDINSGAAIVSALSNKSQLAVLDLNGNAFGEEGVERIQEMMEAAGL 338

Query: 463 AAAL 466
             AL
Sbjct: 339 EQAL 342



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 103/155 (66%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA VF+ L +L  + MPQNGIY  GI+AL+ A ++N  LR LNL+DNT T  G+  +   
Sbjct: 188 LAEVFETLGSLVELSMPQNGIYCDGISALARALKKNPHLRVLNLSDNTFTEDGSALMADV 247

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L ++N G+CL++S GA +IA+ + D +  L ++ L+ NE+ +  G  +V A+ N
Sbjct: 248 IPSLQELEVINFGECLVRSKGAVAIAEAVKDGHQMLRELWLSYNELDINSGAAIVSALSN 307

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K++L  ++++ N FGEEGVE ++++M++ G+  AL
Sbjct: 308 KSQLAVLDLNGNAFGEEGVERIQEMMEAAGLEQAL 342


>gi|4877972|gb|AAD31518.1|AF143860_1 RanGAP [Drosophila melanogaster]
          Length = 596

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 117/244 (47%), Positives = 159/244 (65%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA+L  LDLS+NA GP G+ GL +LLRS  C++L+EL L N GLG  G  +LS+AL D +
Sbjct: 107 GAKLTVLDLSENALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLH 166

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            ++ K G PL L+VFI  RNRLE+ GA  +A  F+ LKT E + + QN IY  G+ AL++
Sbjct: 167 ANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAE 226

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           +F+ N +LR LN+NDNT+  +GA  + +AL  LP L  ++ GDCL+K+ GA    + L  
Sbjct: 227 SFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALER 286

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
            N  LE ++L  NEI+  GGL LV AM NK KL+ +N+  N FGEEG E++   M     
Sbjct: 287 GNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLPT 346

Query: 463 AAAL 466
           AAAL
Sbjct: 347 AAAL 350



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 3/180 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+ LKT E + + QN IY  G+ AL+++F+ N  LR LN+NDNT+  +GA  + +A
Sbjct: 196 MATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEA 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  ++ GDCL+K+ GA    + L   N  LE ++L  NEI+  GGL LV AM N
Sbjct: 256 LPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGN 315

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           K KL+ +N+  N FGEEG E++   M     AAA  L+  + +  ++ +DE   ++ D+D
Sbjct: 316 KPKLRILNLDGNSFGEEGSEKIISEMSKLPTAAA--LQPFQHQEEEDLEDEYQADKQDAD 373


>gi|198473351|ref|XP_001356263.2| GA22178 [Drosophila pseudoobscura pseudoobscura]
 gi|198139417|gb|EAL33326.2| GA22178 [Drosophila pseudoobscura pseudoobscura]
          Length = 583

 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 113/247 (45%), Positives = 162/247 (65%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           ++  A+L  LDLSDNA GP G+ GL   LRS  C++L+EL L N GLG  G  +LS+AL 
Sbjct: 106 IEAKAKLTVLDLSDNALGPNGMRGLEAFLRSPVCYSLQELHLYNCGLGSEGGAMLSRALI 165

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D + ++KK G+PL L++F+ GRNRLE+ GAK +A  F  LKT + + + QN IY  G+ A
Sbjct: 166 DLHANAKKAGTPLQLRLFMGGRNRLEDAGAKAMANAFATLKTFQEIVLLQNSIYLEGVKA 225

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+D+F+ N +LR LN+ DNT+  KGA  + + +  L  L  +N GDCL+ + GA  IA+ 
Sbjct: 226 LADSFKANPHLRVLNMYDNTLKSKGADEIAEVIKSLTMLREINFGDCLIGTNGAYQIAEA 285

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L + N  LE ++L+ NEI+  GGL LV A++NK KL+ +N+  N FGEEG  ++ + M  
Sbjct: 286 LENSNYDLEVIDLSSNEINSDGGLVLVTAIQNKPKLRVLNIDSNCFGEEGCAQIIEQMSM 345

Query: 460 FGMAAAL 466
           +  A AL
Sbjct: 346 YPNAVAL 352



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F  LKT + + + QN IY  G+ AL+D+F+ N  LR LN+ DNT+  KGA  + + 
Sbjct: 198 MANAFATLKTFQEIVLLQNSIYLEGVKALADSFKANPHLRVLNMYDNTLKSKGADEIAEV 257

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L  +N GDCL+ + GA  IA+ L + N  LE ++L+ NEI+  GGL LV A++N
Sbjct: 258 IKSLTMLREINFGDCLIGTNGAYQIAEALENSNYDLEVIDLSSNEINSDGGLVLVTAIQN 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K KL+ +N+  N FGEEG  ++ + M  +  A AL
Sbjct: 318 KPKLRVLNIDSNCFGEEGCAQIIEQMSMYPNAVAL 352


>gi|195164668|ref|XP_002023168.1| GL21210 [Drosophila persimilis]
 gi|194105253|gb|EDW27296.1| GL21210 [Drosophila persimilis]
          Length = 583

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 113/247 (45%), Positives = 162/247 (65%), Gaps = 1/247 (0%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           ++  A+L  LDLSDNA GP G+ GL   LRS  C++L+EL L N GLG  G  +LS+AL 
Sbjct: 106 IEAKAKLTVLDLSDNALGPNGMRGLEAFLRSPVCYSLQELHLYNCGLGSEGGAMLSRALI 165

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D + ++KK G+PL L++F+ GRNRLE+ GAK +A  F  LKT + + + QN IY  G+ A
Sbjct: 166 DLHANAKKAGTPLQLRLFMGGRNRLEDAGAKAMANAFATLKTFQEIVLLQNSIYLEGVKA 225

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+D+F+ N +LR LN+ DNT+  KGA  + + +  L  L  +N GDCL+ + GA  IA+ 
Sbjct: 226 LADSFKANPHLRVLNMYDNTLKSKGADEIAEVIKSLTMLREINFGDCLIGTNGAYQIAEA 285

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L + N  LE ++L+ NEI+  GGL LV A++NK KL+ +N+  N FGEEG  ++ + M  
Sbjct: 286 LENSNYDLEVIDLSSNEINSDGGLVLVTAIQNKPKLRVLNIDSNCFGEEGCAQIIEQMSM 345

Query: 460 FGMAAAL 466
           +  A AL
Sbjct: 346 YPNAVAL 352



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F  LKT + + + QN IY  G+ AL+D+F+ N  LR LN+ DNT+  KGA  + + 
Sbjct: 198 MANAFATLKTFQEIVLLQNSIYLEGVKALADSFKANPHLRVLNMYDNTLKSKGADEIAEV 257

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L  L  +N GDCL+ + GA  IA+ L + N  LE ++L+ NEI+  GGL LV A++N
Sbjct: 258 IKSLTMLREINFGDCLIGTNGAYQIAEALENSNYDLEVIDLSSNEINSDGGLVLVTAIQN 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K KL+ +N+  N FGEEG  ++ + M  +  A AL
Sbjct: 318 KPKLRVLNIDSNCFGEEGCAQIIEQMSMYPNAVAL 352


>gi|195345099|ref|XP_002039113.1| GM17349 [Drosophila sechellia]
 gi|194134243|gb|EDW55759.1| GM17349 [Drosophila sechellia]
          Length = 602

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/244 (47%), Positives = 156/244 (63%), Gaps = 1/244 (0%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA+L  LDLSDNA GP G+ GL   LRS  C++L+EL L N GLG  G  +LS+AL D +
Sbjct: 109 GAKLTVLDLSDNALGPNGMRGLEKFLRSPVCYSLQELLLCNCGLGPEGGSMLSQALIDLH 168

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            ++ K G PL L+VF+  RNRLE+ GA  +A  F+ LKTLE + + QN IY  G+ AL+ 
Sbjct: 169 ANANKAGFPLQLRVFMGPRNRLEDTGAMAMATTFQTLKTLEEIVLEQNSIYFKGVEALAK 228

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           +F+ N +LR LN+NDNT+   GA  + + L  LP L  ++ GDCL+++ GA  + + L  
Sbjct: 229 SFKNNPHLRVLNMNDNTLKSNGAEQIAEVLPFLPLLREMSFGDCLIQTNGAYHLGEALER 288

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
            N  LE ++L  NEI+  GGL LV AM+NK KL+ +N+  N FGE G EE+   M     
Sbjct: 289 GNEQLEVIDLGFNEINSDGGLVLVNAMRNKPKLRILNLDGNWFGEAGSEEIISEMSKLPT 348

Query: 463 AAAL 466
           AAAL
Sbjct: 349 AAAL 352



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 105/177 (59%), Gaps = 8/177 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+ LKTLE + + QN IY  G+ AL+ +F+ N  LR LN+NDNT+   GA  + + 
Sbjct: 198 MATTFQTLKTLEEIVLEQNSIYFKGVEALAKSFKNNPHLRVLNMNDNTLKSNGAEQIAEV 257

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  LP L  ++ GDCL+++ GA  + + L   N  LE ++L  NEI+  GGL LV AM+N
Sbjct: 258 LPFLPLLREMSFGDCLIQTNGAYHLGEALERGNEQLEVIDLGFNEINSDGGLVLVNAMRN 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           K KL+ +N+  N FGE G EE+   M     AAAL       +    +++E+S +EN
Sbjct: 318 KPKLRILNLDGNWFGEAGSEEIISEMSKLPTAAAL-------QPFQHQEEEDSVDEN 367


>gi|313245785|emb|CBY34780.1| unnamed protein product [Oikopleura dioica]
          Length = 858

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 171/549 (31%), Positives = 260/549 (47%), Gaps = 97/549 (17%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FKKL +LE V M QNGI   G  AL++AF+ +  +R +NLNDN +T KGA  +  A
Sbjct: 209 LAVGFKKLGSLEEVTMHQNGITWKGAAALAEAFK-HCPMRLINLNDNILTQKGAHAVALA 267

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L  +P+L IL+LGDCLL+  GA S+A  L     +  VN + + + ++G L ++KA+   
Sbjct: 268 LRSIPTLEILDLGDCLLRDKGAQSLAAGLKSCENIHTVNFSYSAVRIEGALQVIKALP-L 326

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEE-----QDEESEEE 176
            +++++++  N FG+EG E+++ +    G      L++DEG+  + E      D E E+E
Sbjct: 327 AQMEKLDLDGNCFGDEGCEQLQAMSDLVGD-----LQNDEGDEDESENENAVTDSEDEDE 381

Query: 177 NDSDAEGD-----------NSNLSHNDSNHS--------HNASNQSHNNSNQSHNTSNQS 217
           +   +  D           N NL    S            N +   H    + ++ ++  
Sbjct: 382 HYQGSSVDIVKELQVGCMKNVNLGQEASPVDEECEPMLEQNTTVDFHGKGLKVNDETDAQ 441

Query: 218 HM--SLKTGARLVELDLSDNAFGPIGVEG---------------LADL----LRSSCCFA 256
            +  ++    RL+ L LS N   P G +                LAD+    L+     A
Sbjct: 442 PIIDAINQKDRLITLRLSGNTLAPDGAKAIALALKGRNELQHLLLADIFTGRLKDEIPVA 501

Query: 257 LEELK---------------LNNNGLGITGCKLLSKALH--------------------- 280
           ++ L                L++N  G  G K +   L                      
Sbjct: 502 IQHLNDALNLGEGCRLRTLDLSDNAFGPNGAKAVEPWLRTKCCLKLQTLLLNNNGLGVFG 561

Query: 281 ---------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
                    D  + S+K    L L+ FIAGRNRLE EG   LA  F K+ TLE  + PQN
Sbjct: 562 AKMIANGLSDLIKLSQKVNVKLMLRKFIAGRNRLEIEGTAALAEQFGKMGTLEDYQSPQN 621

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
           GI   GI AL+    +NK L+ LN+NDN +T +G   L        +L  L+LGDCL++S
Sbjct: 622 GIQAKGIEALAKGLSKNKGLKILNINDNIVTERGVASLVPVFKNCKNLERLDLGDCLIRS 681

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            GA  +A+ L     L  VNL+ NEI+   G+ +  A  +   L+ +N++ NQFGE G E
Sbjct: 682 KGAKIVAENLQGLPNLRQVNLSYNEINAIAGIAVANATGSLKLLENLNLNGNQFGEVGCE 741

Query: 452 EMEKLMKSF 460
           E+ + MK+ 
Sbjct: 742 EVLEAMKAL 750



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 153/240 (63%), Gaps = 2/240 (0%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
           K+GAR+ +LDLSDNAFGP G +G+  +L +  C  +EEL LNN GLG +G +++   L  
Sbjct: 118 KSGARIKKLDLSDNAFGPNGAKGVKPILETDACLEMEELLLNNCGLGESGGEIIGAGLEI 177

Query: 282 CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
             ++ +K G    LK+FIAGRNR E +G+  LA  FKKL +LE V M QNGI   G  AL
Sbjct: 178 LNDNIRKAGLTPKLKIFIAGRNRQEVKGSAALAVGFKKLGSLEEVTMHQNGITWKGAAAL 237

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           ++AF+    +R +NLNDN +T KGA  +  AL  +P+L IL+LGDCLL+  GA S+A  L
Sbjct: 238 AEAFKHCP-MRLINLNDNILTQKGAHAVALALRSIPTLEILDLGDCLLRDKGAQSLAAGL 296

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
                +  VN + + + ++G L ++KA+    +++++++  N FG+EG E+++ +    G
Sbjct: 297 KSCENIHTVNFSYSAVRIEGALQVIKALP-LAQMEKLDLDGNCFGDEGCEQLQAMSDLVG 355


>gi|313224500|emb|CBY20290.1| unnamed protein product [Oikopleura dioica]
          Length = 880

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 171/549 (31%), Positives = 260/549 (47%), Gaps = 97/549 (17%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FKKL +LE V M QNGI   G  AL++AF+ +  +R +NLNDN +T KGA  +  A
Sbjct: 209 LAVGFKKLGSLEEVTMHQNGITWKGAAALAEAFK-HCPMRLINLNDNILTQKGAHAVALA 267

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L  +P+L IL+LGDCLL+  GA S+A  L     +  VN + + + ++G L ++KA+   
Sbjct: 268 LRSIPTLEILDLGDCLLRDKGAQSLAAGLKSCENIHTVNFSYSAVRIEGALQVIKALP-L 326

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEE-----QDEESEEE 176
            +++++++  N FG+EG E+++ +    G      L++DEG+  + E      D E E+E
Sbjct: 327 AQMEKLDLDGNCFGDEGCEQLQAMSDLVGD-----LQNDEGDEDESENENAVTDSEDEDE 381

Query: 177 NDSDAEGD-----------NSNLSHNDSNHS--------HNASNQSHNNSNQSHNTSNQS 217
           +   +  D           N NL    S            N +   H    + ++ ++  
Sbjct: 382 HYQGSSVDIVKELQVGCMKNVNLGQEASPVDEECEPMLEQNTTVDFHGKGLKVNDETDAQ 441

Query: 218 HM--SLKTGARLVELDLSDNAFGPIGVEG---------------LADL----LRSSCCFA 256
            +  ++    RL+ L LS N   P G +                LAD+    L+     A
Sbjct: 442 PIIDAINQKDRLITLRLSGNTLAPDGAKAIALALKGRNELQHLLLADIFTGRLKDEIPVA 501

Query: 257 LEELK---------------LNNNGLGITGCKLLSKALH--------------------- 280
           ++ L                L++N  G  G K +   L                      
Sbjct: 502 IQHLNDALNLGEGCRLRTLDLSDNAFGPNGAKAVEPWLRTKCCLKLQTLLLNNNGLGVFG 561

Query: 281 ---------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
                    D  + S+K    L L+ FIAGRNRLE EG   LA  F K+ TLE  + PQN
Sbjct: 562 AKMIANGLSDLIKLSQKVNVKLMLRKFIAGRNRLEIEGTAALAEQFGKMGTLEDYQSPQN 621

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
           GI   GI AL+    +NK L+ LN+NDN +T +G   L        +L  L+LGDCL++S
Sbjct: 622 GIQAKGIEALAKGLSKNKGLKILNINDNIVTERGVASLVPVFKNCKNLERLDLGDCLIRS 681

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            GA  +A+ L     L  VNL+ NEI+   G+ +  A  +   L+ +N++ NQFGE G E
Sbjct: 682 KGAKIVAENLQGLPNLRQVNLSYNEINAIAGIAVANATGSLKLLENLNLNGNQFGEVGCE 741

Query: 452 EMEKLMKSF 460
           E+ + MK+ 
Sbjct: 742 EVLEAMKAL 750



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 153/240 (63%), Gaps = 2/240 (0%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
           K+GAR+ +LDLSDNAFGP G +G+  +L +  C  +EEL LNN GLG +G +++   L  
Sbjct: 118 KSGARIKKLDLSDNAFGPNGAKGVKPILETDACLEMEELLLNNCGLGESGGEIIGAGLEI 177

Query: 282 CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
             ++ +K G    LK+FIAGRNR E +G+  LA  FKKL +LE V M QNGI   G  AL
Sbjct: 178 LNDNIRKAGLTPKLKIFIAGRNRQEVKGSAALAVGFKKLGSLEEVTMHQNGITWKGAAAL 237

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           ++AF+    +R +NLNDN +T KGA  +  AL  +P+L IL+LGDCLL+  GA S+A  L
Sbjct: 238 AEAFKHCP-MRLINLNDNILTQKGAHAVALALRSIPTLEILDLGDCLLRDKGAQSLAAGL 296

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
                +  VN + + + ++G L ++KA+    +++++++  N FG+EG E+++ +    G
Sbjct: 297 KSCENIHTVNFSYSAVRIEGALQVIKALP-LAQMEKLDLDGNCFGDEGCEQLQAMSDLVG 355


>gi|47226138|emb|CAG04512.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1174

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 102/196 (52%), Positives = 135/196 (68%), Gaps = 5/196 (2%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GARL ELDLSDNAFGP GV G+  LL+S  C  L ELKLNN G+G+ G K+L++AL +C+
Sbjct: 111 GARLTELDLSDNAFGPDGVRGVERLLKSPSCHTLRELKLNNCGMGVGGGKILAEALMECH 170

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
             S   G+PL L+VF+AGRNRLENEGA  LA  F    +LE V +PQNGI H G+ AL+ 
Sbjct: 171 RQSTAAGAPLRLRVFVAGRNRLENEGAFALAKAF----SLEEVHLPQNGINHAGVVALAS 226

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A   N+ LR LN NDNT T KG + + +AL  L +L ++N GDCL++S GA ++A  L +
Sbjct: 227 AARHNRQLRVLNFNDNTFTKKGTLAMAKALRHLRNLQVVNFGDCLVRSEGAIALAAVLRE 286

Query: 404 N-TTLEDVNLTCNEIS 418
               L+++NL+  EI+
Sbjct: 287 GLPVLKELNLSFGEIT 302



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 1/106 (0%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A    K  +LE V +PQNGI H G+ AL+ A   N++LR LN NDNT T KG + + +AL
Sbjct: 197 AFALAKAFSLEEVHLPQNGINHAGVVALASAARHNRQLRVLNFNDNTFTKKGTLAMAKAL 256

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEIS 107
             L +L ++N GDCL++S GA ++A  L +    L+++NL+  EI+
Sbjct: 257 RHLRNLQVVNFGDCLVRSEGAIALAAVLREGLPVLKELNLSFGEIT 302


>gi|358337705|dbj|GAA56049.1| Ran GTPase-activating protein 1, partial [Clonorchis sinensis]
          Length = 768

 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/252 (44%), Positives = 164/252 (65%), Gaps = 8/252 (3%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           + +GA+LVELDLSDNAFGP GV G+ +LL S  CF LE L++NN GLG  GC+ L++AL 
Sbjct: 123 ISSGAQLVELDLSDNAFGPNGVVGVVELLSSPACFTLEVLRMNNQGLGHEGCRYLTQALE 182

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI-YHV--G 337
              E+  + G  LALKVF A RNRLEN GA+MLA V   + +LE + + QNGI  H   G
Sbjct: 183 KGREACNRHG--LALKVFSASRNRLENVGAQMLAKVLADMGSLEELSLCQNGIGIHGKDG 240

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
           + +LS     N  LR LNL+DNT+T +G   + +AL  L  L  L+LGDC+L+S+GA ++
Sbjct: 241 MQSLSKILMANTKLRLLNLSDNTLTAEGGKIIAKALRSLGKLEELHLGDCILRSSGAQAL 300

Query: 398 AKYLTDNTTLED---VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
           A  L D     D   +NL+ NEI+ Q G+ LV ++ +K+ L+ ++++ N+FG+ G++ + 
Sbjct: 301 AAVLDDPKVSPDLRVLNLSGNEITRQAGVSLVLSLGSKSHLESLDLNANEFGKSGIQAII 360

Query: 455 KLMKSFGMAAAL 466
           + ++S  +   L
Sbjct: 361 RSLESIDLLHTL 372



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 99/161 (61%), Gaps = 6/161 (3%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGI-YHV--GITALSDAFEENKKLRHLNLNDNTITYKGAIP 57
           MLA V   + +LE + + QNGI  H   G+ +LS     N KLR LNL+DNT+T +G   
Sbjct: 212 MLAKVLADMGSLEELSLCQNGIGIHGKDGMQSLSKILMANTKLRLLNLSDNTLTAEGGKI 271

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED---VNLTCNEISVQGGLDL 114
           + +AL  L  L  L+LGDC+L+S+GA ++A  L D     D   +NL+ NEI+ Q G+ L
Sbjct: 272 IAKALRSLGKLEELHLGDCILRSSGAQALAAVLDDPKVSPDLRVLNLSGNEITRQAGVSL 331

Query: 115 VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           V ++ +K+ L+ ++++ N+FG+ G++ + + ++S  +   L
Sbjct: 332 VLSLGSKSHLESLDLNANEFGKSGIQAIIRSLESIDLLHTL 372



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 24/228 (10%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML----AA 315
           L L  N LGI   + L  AL    E++KK    +   +F     RL+ E A  L    + 
Sbjct: 69  LNLTGNTLGIVAAEPLGAAL----ENNKKLRRCIFSDLFTG---RLKTEIAPALRHLCSG 121

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKGAIPLGQAL 373
           +      L  +++  N     G+  + +         L  L +N+  + ++G   L QAL
Sbjct: 122 IISSGAQLVELDLSDNAFGPNGVVGVVELLSSPACFTLEVLRMNNQGLGHEGCRYLTQAL 181

Query: 374 SKLP--------SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG--GL 423
            K          +L + +     L++ GA  +AK L D  +LE+++L  N I + G  G+
Sbjct: 182 EKGREACNRHGLALKVFSASRNRLENVGAQMLAKVLADMGSLEELSLCQNGIGIHGKDGM 241

Query: 424 D-LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
             L K +   TKL+ +N+S+N    EG + + K ++S G    L L D
Sbjct: 242 QSLSKILMANTKLRLLNLSDNTLTAEGGKIIAKALRSLGKLEELHLGD 289



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 11/131 (8%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLP--------SLAILNLGDCLLKSAGASSIAKYLT 91
           L  L +N+  + ++G   L QAL K          +L + +     L++ GA  +AK L 
Sbjct: 159 LEVLRMNNQGLGHEGCRYLTQALEKGREACNRHGLALKVFSASRNRLENVGAQMLAKVLA 218

Query: 92  DNTTLEDVNLTCNEISVQG--GLD-LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           D  +LE+++L  N I + G  G+  L K +   TKL+ +N+S+N    EG + + K ++S
Sbjct: 219 DMGSLEELSLCQNGIGIHGKDGMQSLSKILMANTKLRLLNLSDNTLTAEGGKIIAKALRS 278

Query: 149 FGMAAALVLED 159
            G    L L D
Sbjct: 279 LGKLEELHLGD 289


>gi|260785500|ref|XP_002587799.1| hypothetical protein BRAFLDRAFT_126584 [Branchiostoma floridae]
 gi|229272952|gb|EEN43810.1| hypothetical protein BRAFLDRAFT_126584 [Branchiostoma floridae]
          Length = 1246

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 152/406 (37%), Positives = 216/406 (53%), Gaps = 52/406 (12%)

Query: 67   SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            +L +   G   L++ GA +++K      TLE+V++  N I   G   L +A      L+ 
Sbjct: 815  ALKVFISGRNRLENPGAKALSKAFKVIGTLEEVSMPQNGIQHLGITALAEAFSENKNLRV 874

Query: 127  INVSENQFGEEGVEEMEKL-----MKSFGM-AAALVLEDDEGECSDEEQDEESEEENDSD 180
            +N+++N F E+G E M K      +K F + + ++ LE         E  +   E  D  
Sbjct: 875  VNLNDNIFTEKGAESMAKKKRKVSLKDFSLFSVSIHLES----TIPAEIVKAVLEAVDLQ 930

Query: 181  AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
            A     N    ++  +  A+ + H    +S   +      +   A LVELDLSDNAFGP 
Sbjct: 931  ALRLEGNTVGVEAAKAIAAALEKHPEFEESLGGA-----VITANAHLVELDLSDNAFGPD 985

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            GV+    LL S   + LE LKLNNNGLG+ G ++LS+AL +C+ +S  EG PLALKVFI+
Sbjct: 986  GVKACRGLLTSKAVYTLEVLKLNNNGLGVGGGQILSEALIECHTASSTEGKPLALKVFIS 1045

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
            GRNRLEN GAK L+  FK + TLE V MPQNGI H+GITAL++AF ENKNLR +NLNDN 
Sbjct: 1046 GRNRLENPGAKALSKAFKVIGTLEEVSMPQNGIQHLGITALAEAFSENKNLRVVNLNDNI 1105

Query: 361  ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
             T K                            GA S+AK L          L+ NEI   
Sbjct: 1106 FTEK----------------------------GAESMAKELI---------LSYNEIRKD 1128

Query: 421  GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
              + + +A++ K  LK+++++ NQ GEEG+EE+   +++F M   L
Sbjct: 1129 AAILVAEAVEGKEHLKKLDLNGNQLGEEGIEELSGTLEAFDMVDVL 1174



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/252 (45%), Positives = 155/252 (61%), Gaps = 18/252 (7%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A LVELDLSDNAFGP GV+    LL S   + LE LKLNNNGLG+ G ++LS+AL +C+ 
Sbjct: 746 AHLVELDLSDNAFGPDGVKACRGLLTSKAVYTLEVLKLNNNGLGVGGGQILSEALIECHT 805

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           +S  EG PLALKVFI+GRNRLEN GAK L+  FK + TLE V MPQNGI H+GITAL++A
Sbjct: 806 ASSTEGKPLALKVFISGRNRLENPGAKALSKAFKVIGTLEEVSMPQNGIQHLGITALAEA 865

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL--LKSAGASSIAKYLT 402
           F ENKNLR +NLNDN  T KGA  + +   K+ SL   +L      L+S   + I K + 
Sbjct: 866 FSENKNLRVVNLNDNIFTEKGAESMAKKKRKV-SLKDFSLFSVSIHLESTIPAEIVKAVL 924

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK---------------LKQINVSENQFGE 447
           +   L+ + L  N + V+    +  A++   +               L ++++S+N FG 
Sbjct: 925 EAVDLQALRLEGNTVGVEAAKAIAAALEKHPEFEESLGGAVITANAHLVELDLSDNAFGP 984

Query: 448 EGVEEMEKLMKS 459
           +GV+    L+ S
Sbjct: 985 DGVKACRGLLTS 996



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 37/154 (24%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            L+  FK + TLE V MPQNGI H+GITAL++AF ENK LR +NLNDN  T K        
Sbjct: 1058 LSKAFKVIGTLEEVSMPQNGIQHLGITALAEAFSENKNLRVVNLNDNIFTEK-------- 1109

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
                                GA S+AK L          L+ NEI     + + +A++ K
Sbjct: 1110 --------------------GAESMAKELI---------LSYNEIRKDAAILVAEAVEGK 1140

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
              LK+++++ NQ GEEG+EE+   +++F M   L
Sbjct: 1141 EHLKKLDLNGNQLGEEGIEELSGTLEAFDMVDVL 1174



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 18/164 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  FK + TLE V MPQNGI H+GITAL++AF ENK LR +NLNDN  T KGA  + + 
Sbjct: 834 LSKAFKVIGTLEEVSMPQNGIQHLGITALAEAFSENKNLRVVNLNDNIFTEKGAESMAKK 893

Query: 62  LSKLPSLAILNLGDCL--LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
             K+ SL   +L      L+S   + I K + +   L+ + L  N + V+    +  A++
Sbjct: 894 KRKV-SLKDFSLFSVSIHLESTIPAEIVKAVLEAVDLQALRLEGNTVGVEAAKAIAAALE 952

Query: 120 NKTK---------------LKQINVSENQFGEEGVEEMEKLMKS 148
              +               L ++++S+N FG +GV+    L+ S
Sbjct: 953 KHPEFEESLGGAVITANAHLVELDLSDNAFGPDGVKACRGLLTS 996



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 3/121 (2%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           +N + + G  ALS AF+    L  +++  N I + G   L +A S+  +L ++NL D + 
Sbjct: 823 RNRLENPGAKALSKAFKVIGTLEEVSMPQNGIQHLGITALAEAFSENKNLRVVNLNDNIF 882

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL--DLVKAMKNKTKLKQINVSENQFGE 136
              GA S+AK      +L+D +L    I ++  +  ++VKA+     L+ + +  N  G 
Sbjct: 883 TEKGAESMAKK-KRKVSLKDFSLFSVSIHLESTIPAEIVKAVLEAVDLQALRLEGNTVGV 941

Query: 137 E 137
           E
Sbjct: 942 E 942


>gi|402592127|gb|EJW86056.1| hypothetical protein WUBG_03034 [Wuchereria bancrofti]
          Length = 817

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/230 (44%), Positives = 149/230 (64%), Gaps = 3/230 (1%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           ++ G RLVELDLSDNAFGPIG +GL + L SS  ++L+ LKLNNNGLG  G K++ KAL 
Sbjct: 91  IRCGTRLVELDLSDNAFGPIGAKGLEEFLESSSAYSLKVLKLNNNGLG-AGGKIIGKALI 149

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C+ +++K+G    LK F+AGRNRLE+ GA  LA  F+ L +LE + M Q+GI   GI A
Sbjct: 150 RCHVNAQKDGQIFQLKTFVAGRNRLEDPGAFALAEAFQVLGSLEEITMYQDGIRAKGIEA 209

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK- 399
           LS++F  N+NLR +NL+DNT T  GA  + + +  L +L +LN GDCL +  GA +I   
Sbjct: 210 LSESFRYNRNLRIINLSDNTFTVNGACAMAKVVRDLMNLEVLNFGDCLCRDKGALAIISN 269

Query: 400 -YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
             L+ ++ L+++NL+ NE+S +    ++  +     LK + +  N  G +
Sbjct: 270 ISLSSHSHLKEINLSGNELSPRAVEIILDRVSQGLHLKSLVLHTNNMGAQ 319



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 209/465 (44%), Gaps = 78/465 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ L +LE + M Q+GI   GI ALS++F  N+ LR +NL+DNT T  GA  + + 
Sbjct: 182 LAEAFQVLGSLEEITMYQDGIRAKGIEALSESFRYNRNLRIINLSDNTFTVNGACAMAKV 241

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAK--YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           +  L +L +LN GDCL +  GA +I     L+ ++ L+++NL+ NE+S +    ++  + 
Sbjct: 242 VRDLMNLEVLNFGDCLCRDKGALAIISNISLSSHSHLKEINLSGNELSPRAVEIILDRVS 301

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK-SFGMAAALVLEDDEGECSDEEQDEESEEEND 178
               LK + +  N  G +  +   K  K SF          D GE SD++   + +E +D
Sbjct: 302 QGLHLKSLVLHTNNMGAQFDKVKSKCNKYSF---------IDLGEESDDQGTLDEDEGSD 352

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF- 237
              E  +     + SN+   +  +   N    H  S+ SH SLK       +   +  + 
Sbjct: 353 VCQEFYSEESHSSYSNNE--SGYEQMKNGIPIH--SSTSHRSLKADDYQTIISFRNQQWN 408

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
               VE +   L S     ++ L L+ N +GI  C+ +++ L                  
Sbjct: 409 SEDDVEAVTQALLSRKF--VKALDLHRNYIGINACRRIAEVL------------------ 448

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
               R R++             ++++E V + QNGI   GI  L  AF  N NL+ + L+
Sbjct: 449 ----RERMQ-----------MNMQSIEEVNLSQNGITAEGIVQLVHAFRSNPNLKVIILS 493

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            NT+ ++GAI + + L  L SL IL+L  C     G  ++A  L+ +T L          
Sbjct: 494 GNTLEFEGAIAVAEVLPSLRSLEILDLSSCACHERGILAVATNLSSSTHL---------- 543

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
                           +L+ ++ S N  G + V+++ ++  S G 
Sbjct: 544 ----------------RLRVLDFSSNALGADAVQQIVRIFSSGGF 572



 Score = 38.5 bits (88), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 24/218 (11%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML--- 313
           +E L+L  N +G+   + LS+AL    E  +   S +          RL+ E   +L   
Sbjct: 34  VEVLELRGNTIGVGAGERLSRALEFHPELKRALWSDMF-------TGRLKEEIPPILRFL 86

Query: 314 -AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKGAIPLG 370
             A+ +    L  +++  N    +G   L +  E +   +L+ L LN+N +   G I +G
Sbjct: 87  CCAMIRCGTRLVELDLSDNAFGPIGAKGLEEFLESSSAYSLKVLKLNNNGLGAGGKI-IG 145

Query: 371 QALSK----------LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           +AL +          +  L     G   L+  GA ++A+      +LE++ +  + I  +
Sbjct: 146 KALIRCHVNAQKDGQIFQLKTFVAGRNRLEDPGAFALAEAFQVLGSLEEITMYQDGIRAK 205

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           G   L ++ +    L+ IN+S+N F   G   M K+++
Sbjct: 206 GIEALSESFRYNRNLRIINLSDNTFTVNGACAMAKVVR 243


>gi|156356048|ref|XP_001623743.1| predicted protein [Nematostella vectensis]
 gi|156210471|gb|EDO31643.1| predicted protein [Nematostella vectensis]
          Length = 355

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/225 (49%), Positives = 154/225 (68%), Gaps = 1/225 (0%)

Query: 217 SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS 276
           S   +  G RLVELDLSDNAFGP GV+    LL S  C++L+ L+ NNNGLG+ G KLLS
Sbjct: 107 SDAVISAGTRLVELDLSDNAFGPDGVKACVKLLTSPACYSLKILRFNNNGLGVGGGKLLS 166

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
            AL D ++SS   G+PL L+VFI+GRNRLEN G+K LA  FK + TL  V+MPQNGI H 
Sbjct: 167 GALLDNHKSSTAAGTPLKLEVFISGRNRLENPGSKCLAEAFKTIGTLVEVQMPQNGIQHE 226

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           GITAL+++F  N NL+ +NLNDN  T KGA  + + L  L ++ ++N GDCL+KSAGA +
Sbjct: 227 GITALAESFRSNPNLKIINLNDNIFTEKGATSMAKVLPTLNNVEVINFGDCLVKSAGAVA 286

Query: 397 IAKY-LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
           +A+   T    L+++ L+ +EI     L + K+++NK   K++++
Sbjct: 287 LAEACCTSLPNLKELILSFDEIKKDAALTVAKSVQNKADFKKLDL 331



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 84/129 (65%), Gaps = 1/129 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK + TL  V+MPQNGI H GITAL+++F  N  L+ +NLNDN  T KGA  + + 
Sbjct: 203 LAEAFKTIGTLVEVQMPQNGIQHEGITALAESFRSNPNLKIINLNDNIFTEKGATSMAKV 262

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKY-LTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L ++ ++N GDCL+KSAGA ++A+   T    L+++ L+ +EI     L + K+++N
Sbjct: 263 LPTLNNVEVINFGDCLVKSAGAVALAEACCTSLPNLKELILSFDEIKKDAALTVAKSVQN 322

Query: 121 KTKLKQINV 129
           K   K++++
Sbjct: 323 KADFKKLDL 331


>gi|341900676|gb|EGT56611.1| hypothetical protein CAEBREN_04083 [Caenorhabditis brenneri]
          Length = 576

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/235 (45%), Positives = 144/235 (61%), Gaps = 8/235 (3%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +K GA++ ELDLSDNAFGPIG + L + L S   F+LE LKLNNNGLG+ G K ++K+L 
Sbjct: 146 IKAGAKIKELDLSDNAFGPIGADALKEFLESPSAFSLEVLKLNNNGLGVGG-KQIAKSLT 204

Query: 281 DCYESSKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           +C   S   G  S L LK FIAGRNRLEN GA  LAA FK LKT+E  ++ QNGI+  GI
Sbjct: 205 ECLRKSIAVGGESRLRLKTFIAGRNRLENPGANALAATFKSLKTVEWFDIRQNGIHEEGI 264

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A+  A + N+NLR+L L DNT+  KGA  L + L   P L +LNL DCL++ AG + + 
Sbjct: 265 RAIVAALKYNRNLRYLWLEDNTVLPKGAKALARTLESWPKLEVLNLSDCLIRDAGCNYVV 324

Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKN---KTKLKQINVSENQFGEE 448
            +L    +  L+ V L  NE++      L++        T    +++  N FG+E
Sbjct: 325 DHLNPQLHRHLKHVYLCGNELTPPVAKLLIQKWAKFDGFTPKPVLHIHTNSFGDE 379



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK LKT+E  ++ QNGI+  GI A+  A + N+ LR+L L DNT+  KGA  L + 
Sbjct: 239 LAATFKSLKTVEWFDIRQNGIHEEGIRAIVAALKYNRNLRYLWLEDNTVLPKGAKALART 298

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P L +LNL DCL++ AG + +  +L    +  L+ V L  NE++      L++   
Sbjct: 299 LESWPKLEVLNLSDCLIRDAGCNYVVDHLNPQLHRHLKHVYLCGNELTPPVAKLLIQKWA 358

Query: 120 N---KTKLKQINVSENQFGEE 137
                T    +++  N FG+E
Sbjct: 359 KFDGFTPKPVLHIHTNSFGDE 379


>gi|308481906|ref|XP_003103157.1| CRE-RAN-2 protein [Caenorhabditis remanei]
 gi|308260262|gb|EFP04215.1| CRE-RAN-2 protein [Caenorhabditis remanei]
          Length = 988

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/236 (45%), Positives = 144/236 (61%), Gaps = 9/236 (3%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +K G ++ ELDLSDNAFGPIG + L + L S   + LE LKLNNNGLG+ G K ++K+L 
Sbjct: 537 IKAGCKIRELDLSDNAFGPIGADALKEFLESPSAYTLEVLKLNNNGLGVGG-KQIAKSLT 595

Query: 281 DCYESSKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           +C   S   G  + L LK F+AGRNRLEN GA  LAA FK L+T+E  ++ QNGI+  GI
Sbjct: 596 ECLRKSIAVGGENRLRLKTFVAGRNRLENPGAHALAATFKSLETVEWFDVRQNGIHEEGI 655

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            AL  A + N+NLRHL L DNT+  KGA  L +AL   P L +LNL DCLL+ AG + + 
Sbjct: 656 RALVTALKHNRNLRHLWLEDNTVLPKGAKALARALESWPKLEVLNLSDCLLRDAGCNYVI 715

Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK----TKLKQINVSENQFGEE 448
            +L    +  L+ V L  NE++      L++    K    T    +++  N FG+E
Sbjct: 716 DHLNPQLHRHLKHVYLCGNELTPPVAKLLIQKWIQKFDGFTPKPTLHIHTNSFGDE 771



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 130/225 (57%), Gaps = 5/225 (2%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  LDLSDNAFG    + L + L+S   F+LE L LNNNGLG+ G + + +AL +   +S
Sbjct: 135 LTTLDLSDNAFGAGLRDSLFNFLQSPALFSLENLILNNNGLGLAG-ETVGEALCELIATS 193

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           +KEG PL LK F+ GRNRLE      L   F  +KTLE + +PQNGI    I AL+ AF 
Sbjct: 194 RKEGRPLILKKFVCGRNRLEIVSTIALTNAFIMMKTLEEIRLPQNGIGGEAIKALAQAFA 253

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNT 405
            N NLR +++NDN +  +GA+ L + L +L  + +L+LGDC+    G  +I   L     
Sbjct: 254 ANPNLRVIDINDNFVCPEGALELAEVLPELHHIQVLDLGDCVCDDPGVVAILSGLDRRRD 313

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV--SENQFGEE 448
            L+ V L+ N I+    +D +    N  ++  ++V  S N FGE+
Sbjct: 314 CLQKVVLSGNNIT-SDVIDAIGDFFNSARMSHVHVDISFNMFGED 357



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 6/142 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK L+T+E  ++ QNGI+  GI AL  A + N+ LRHL L DNT+  KGA  L +A
Sbjct: 630 LAATFKSLETVEWFDVRQNGIHEEGIRALVTALKHNRNLRHLWLEDNTVLPKGAKALARA 689

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P L +LNL DCLL+ AG + +  +L    +  L+ V L  NE++      L++   
Sbjct: 690 LESWPKLEVLNLSDCLLRDAGCNYVIDHLNPQLHRHLKHVYLCGNELTPPVAKLLIQKWI 749

Query: 120 NK----TKLKQINVSENQFGEE 137
            K    T    +++  N FG+E
Sbjct: 750 QKFDGFTPKPTLHIHTNSFGDE 771



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 218/502 (43%), Gaps = 51/502 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L   F  +KTLE + +PQNGI    I AL+ AF  N  LR +++NDN +  +GA+ L + 
Sbjct: 220 LTNAFIMMKTLEEIRLPQNGIGGEAIKALAQAFAANPNLRVIDINDNFVCPEGALELAEV 279

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L +L  + +L+LGDC+    G  +I   L      L+ V L+ N I+    +D +    N
Sbjct: 280 LPELHHIQVLDLGDCVCDDPGVVAILSGLDRRRDCLQKVVLSGNNIT-SDVIDAIGDFFN 338

Query: 121 KTKLKQINV--SENQFGEEGVEEMEKLMKS---FGMAAALVLEDDEGECSD-EEQ---DE 171
             ++  ++V  S N FGE+      +  +    FG        DDE   SD EEQ   D 
Sbjct: 339 SARMSHVHVDISFNMFGEDFDAAKARHGRGNIDFGRRG-----DDELLSSDGEEQGAEDA 393

Query: 172 ESEEENDSDAEGDNSNL----SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARL 227
             EE   SD    + N     S  D+  + N  N+           S+ S  S   G  +
Sbjct: 394 SMEEGQFSDVLNTSGNTVIERSPADAVLAENMMNEMLTRGFGCFKISD-SDQSAPNGGLI 452

Query: 228 VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSK 287
             LD S         + +  ++ S+    ++ L+L  N LGI    +++KAL    E  +
Sbjct: 453 SFLDKSLKLDTAESADQVVKVINSAK--TMKALELRGNTLGIAAGNVIAKALERHPELER 510

Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK----TLERVEMPQNGIYHVGITALSD 343
              S L          RL+NE   +L A+ K +      +  +++  N    +G  AL +
Sbjct: 511 CLWSDLF-------TGRLKNEIPPILEALGKAMIKAGCKIRELDLSDNAFGPIGADALKE 563

Query: 344 AFEENK--NLRHLNLNDNTITYKG---AIPLGQALSKLPSLAI-----LNL-----GDCL 388
             E      L  L LN+N +   G   A  L + L K  S+A+     L L     G   
Sbjct: 564 FLESPSAYTLEVLKLNNNGLGVGGKQIAKSLTECLRK--SIAVGGENRLRLKTFVAGRNR 621

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           L++ GA ++A       T+E  ++  N I  +G   LV A+K+   L+ + + +N    +
Sbjct: 622 LENPGAHALAATFKSLETVEWFDVRQNGIHEEGIRALVTALKHNRNLRHLWLEDNTVLPK 681

Query: 449 GVEEMEKLMKSFGMAAALVLED 470
           G + + + ++S+     L L D
Sbjct: 682 GAKALARALESWPKLEVLNLSD 703


>gi|341900696|gb|EGT56631.1| hypothetical protein CAEBREN_20551 [Caenorhabditis brenneri]
          Length = 961

 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 107/235 (45%), Positives = 144/235 (61%), Gaps = 8/235 (3%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +K GA++ ELDLSDNAFGPIG + L + L S   F+LE LKLNNNGLG+ G K ++K+L 
Sbjct: 531 IKAGAKIKELDLSDNAFGPIGADALKEFLESPSAFSLEVLKLNNNGLGVGG-KQIAKSLT 589

Query: 281 DCYESSKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           +C   S   G  S L LK FIAGRNRLEN GA  LAA FK L+T+E  ++ QNGI+  GI
Sbjct: 590 ECLRKSIAVGGESRLRLKTFIAGRNRLENPGAHALAATFKSLETVEWFDVRQNGIHEEGI 649

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A+  A + N+NLRHL L DNT+  KGA  L + L   P L +LNL DCL++ AG + + 
Sbjct: 650 RAIVAALKYNRNLRHLWLEDNTVLPKGAKALARTLESWPKLEVLNLSDCLIRDAGCNYVV 709

Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKN---KTKLKQINVSENQFGEE 448
            +L    +  L+ V L  NE++      L++        T    +++  N FG+E
Sbjct: 710 DHLNPQLHRHLKHVYLCGNELTPPVAKLLIQKWAKFDGFTPKPVLHIHTNSFGDE 764



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 127/241 (52%), Gaps = 28/241 (11%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           +G +L  LDLSDNAFG    + L   L+S   + LE L LNNNGLG+ G + +  AL   
Sbjct: 132 SGCQLKTLDLSDNAFGAGLSKSLFSFLQSPALYTLENLILNNNGLGLAG-ETVGNALCQL 190

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
             SSK  G PL LK F+ GRNRLE +    L   F  ++TLE + +PQNGI    I AL+
Sbjct: 191 INSSKAAGKPLKLKKFVCGRNRLEVQSTIALTDAFIMMQTLEEIRLPQNGIKEPAIAALA 250

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
            AF+ N++LR +++NDN    +GA+ L + L  L  L IL+LGDC+    G         
Sbjct: 251 QAFKANRSLRVIDINDNFCGPEGALELAEVLPDLHHLEILDLGDCICDDPGI-------- 302

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
                         I++ GGLD     + +  L+++ +S N    + ++E+     S GM
Sbjct: 303 --------------IAIIGGLD-----RRRDCLQKVVLSGNNITSDVIQEIGSFFNSAGM 343

Query: 463 A 463
           +
Sbjct: 344 S 344



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK L+T+E  ++ QNGI+  GI A+  A + N+ LRHL L DNT+  KGA  L + 
Sbjct: 624 LAATFKSLETVEWFDVRQNGIHEEGIRAIVAALKYNRNLRHLWLEDNTVLPKGAKALART 683

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P L +LNL DCL++ AG + +  +L    +  L+ V L  NE++      L++   
Sbjct: 684 LESWPKLEVLNLSDCLIRDAGCNYVVDHLNPQLHRHLKHVYLCGNELTPPVAKLLIQKWA 743

Query: 120 N---KTKLKQINVSENQFGEE 137
                T    +++  N FG+E
Sbjct: 744 KFDGFTPKPVLHIHTNSFGDE 764



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 213/514 (41%), Gaps = 82/514 (15%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L   F  ++TLE + +PQNGI    I AL+ AF+ N+ LR +++NDN    +GA+ L + 
Sbjct: 221 LTDAFIMMQTLEEIRLPQNGIKEPAIAALAQAFKANRSLRVIDINDNFCGPEGALELAEV 280

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L  L  L IL+LGDC+    G                       I++ GGLD     + +
Sbjct: 281 LPDLHHLEILDLGDCICDDPGI----------------------IAIIGGLD-----RRR 313

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV--LEDDEGECSDEEQDEESEEENDS 179
             L+++ +S N    + ++E+     S GM+   V    +  GE  D  + +  +   D 
Sbjct: 314 DCLQKVVLSGNNITSDVIQEIGSFFNSAGMSHVKVDISVNMFGEDFDAAKAQFGQGNIDF 373

Query: 180 DAEG-DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
              G D    S  +       ++   +  N SH T     +      ++++ D+ +  FG
Sbjct: 374 GRRGDDELLSSDEEEEQGAEDASMEEDALNTSHETVINRSIQPNAVDQMMD-DMVNKGFG 432

Query: 239 PIGVE------GLADLLRSSCCF-----------------ALEELKLNNNGLGITGCKLL 275
            I +       GL   L  S                    +++ L+L  N LGI   K +
Sbjct: 433 CIKITDDSQNNGLVSFLDQSLKLDTAEKASEVVKAIQATQSMKALELRGNTLGIEAGKEI 492

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV----FKKLKTLERVEMPQN 331
           +KAL    E  +   S L          RL++E   +L A+     K    ++ +++  N
Sbjct: 493 AKALETHPELERCLWSDLF-------TGRLKHEIPPILEALGRGMIKAGAKIKELDLSDN 545

Query: 332 GIYHVGITALSDAFEENK--NLRHLNLNDNTITYKG---AIPLGQALSKLPSLAI----- 381
               +G  AL +  E     +L  L LN+N +   G   A  L + L K  S+A+     
Sbjct: 546 AFGPIGADALKEFLESPSAFSLEVLKLNNNGLGVGGKQIAKSLTECLRK--SIAVGGESR 603

Query: 382 LNL-----GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
           L L     G   L++ GA ++A       T+E  ++  N I  +G   +V A+K    L+
Sbjct: 604 LRLKTFIAGRNRLENPGAHALAATFKSLETVEWFDVRQNGIHEEGIRAIVAALKYNRNLR 663

Query: 437 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
            + + +N    +G + + + ++S+     L L D
Sbjct: 664 HLWLEDNTVLPKGAKALARTLESWPKLEVLNLSD 697


>gi|268575432|ref|XP_002642695.1| C. briggsae CBR-RAN-2 protein [Caenorhabditis briggsae]
          Length = 933

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/202 (50%), Positives = 133/202 (65%), Gaps = 5/202 (2%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA++ ELDLSDNAFGPIG + + +LL S   + LE LKLNNNGLGI G K ++K+L 
Sbjct: 506 IAAGAKIRELDLSDNAFGPIGADAIKELLESPSAYTLETLKLNNNGLGIGG-KQIAKSLA 564

Query: 281 DCYESSKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           +C   S   G  + L LK FIAGRNRLEN GA  LAA FK L+T+E  ++ QNGI+  GI
Sbjct: 565 ECLRKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKSLETVEWFDVRQNGIHEEGI 624

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            AL  A + N+NLRHL L DNT+  KGA  L +AL   P L +LNL DCL++ AG + I 
Sbjct: 625 RALVSALKHNRNLRHLWLEDNTVLPKGAKALARALESWPKLEVLNLSDCLIRDAGCNYII 684

Query: 399 KYLTD--NTTLEDVNLTCNEIS 418
            +L    +  L++V L  NE++
Sbjct: 685 DHLNPQLHRHLKNVYLCGNELT 706



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 128/241 (53%), Gaps = 28/241 (11%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           +G +L  LDLSDNAFG    + L++ L+S   ++LE L LNNNGLG+ G +++  AL   
Sbjct: 105 SGCQLTTLDLSDNAFGAGLSDSLSNFLQSPALYSLENLILNNNGLGLAG-EVVGNALCSL 163

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
             +S+K G PL LK F+ GRNRLE      L+  F  ++TLE + +PQNGI      AL+
Sbjct: 164 ISASQKAGRPLKLKKFVCGRNRLEVVSTIALSDAFILMQTLEEIRLPQNGIREPAFGALA 223

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
            A + NKNLR ++LNDN    +GA+ L + L  L  L IL+LGDC+    G         
Sbjct: 224 VALQANKNLRIIDLNDNICGTQGALELAEILPDLHHLEILDLGDCVCDDDGV-------- 275

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
                         + +  GLD     + +  LK++ +S N    + +EE+     S GM
Sbjct: 276 --------------VGILSGLD-----RKRDCLKKVVLSGNNITADIIEEIGDFFNSAGM 316

Query: 463 A 463
           A
Sbjct: 317 A 317



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 2/108 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK L+T+E  ++ QNGI+  GI AL  A + N+ LRHL L DNT+  KGA  L +A
Sbjct: 599 LAATFKSLETVEWFDVRQNGIHEEGIRALVSALKHNRNLRHLWLEDNTVLPKGAKALARA 658

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEIS 107
           L   P L +LNL DCL++ AG + I  +L    +  L++V L  NE++
Sbjct: 659 LESWPKLEVLNLSDCLIRDAGCNYIIDHLNPQLHRHLKNVYLCGNELT 706



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 213/515 (41%), Gaps = 82/515 (15%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  F  ++TLE + +PQNGI      AL+ A + NK LR ++LNDN    +GA+ L + 
Sbjct: 194 LSDAFILMQTLEEIRLPQNGIREPAFGALAVALQANKNLRIIDLNDNICGTQGALELAEI 253

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L  L  L IL+LGDC+    G                       + +  GLD     + +
Sbjct: 254 LPDLHHLEILDLGDCVCDDDGV----------------------VGILSGLD-----RKR 286

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV--LEDDEGECSDEEQDEESEEENDS 179
             LK++ +S N    + +EE+     S GMA   V    +  GE  D  +    +   D 
Sbjct: 287 DCLKKVVLSGNNITADIIEEIGDFFNSAGMAHVKVDISVNMFGEDFDAAKARYGKGNIDF 346

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
              GD+  LS +      + ++   +  N S +T  +        A+ +  +L    FG 
Sbjct: 347 GRRGDDELLSSDGEEMEADDASMEEDAMNTSRDTIIERSAEESDKAQQMLNELVTKGFGC 406

Query: 240 IGV----------------EGLA-DLLRS--------SCCFALEELKLNNNGLGITGCKL 274
           I +                +GL  D  +S        +   +++ L+L  N LGI    L
Sbjct: 407 IRIGDPVETASTDRVSFLDKGLKLDTAQSAEKVVKIITATRSMKTLELRGNTLGIDAGVL 466

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL----KTLERVEMPQ 330
           +++AL    E  K   S L          RL+NE   +L A+ K +      +  +++  
Sbjct: 467 IARALESHPELEKCLWSDLF-------TGRLKNEIPPVLEALGKGIIAAGAKIRELDLSD 519

Query: 331 NGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKG---AIPLGQALSKLPSLAI---- 381
           N    +G  A+ +  E      L  L LN+N +   G   A  L + L K  S+A+    
Sbjct: 520 NAFGPIGADAIKELLESPSAYTLETLKLNNNGLGIGGKQIAKSLAECLRK--SIAVGGEN 577

Query: 382 -LNL-----GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
            L L     G   L++ GA ++A       T+E  ++  N I  +G   LV A+K+   L
Sbjct: 578 RLRLKTFIAGRNRLENPGAHALAATFKSLETVEWFDVRQNGIHEEGIRALVSALKHNRNL 637

Query: 436 KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           + + + +N    +G + + + ++S+     L L D
Sbjct: 638 RHLWLEDNTVLPKGAKALARALESWPKLEVLNLSD 672


>gi|25151676|ref|NP_741232.1| Protein RAN-2, isoform b [Caenorhabditis elegans]
 gi|351058543|emb|CCD66005.1| Protein RAN-2, isoform b [Caenorhabditis elegans]
          Length = 926

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 144/235 (61%), Gaps = 8/235 (3%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  G ++ ELDLSDNAFGPIG + L DLL S   F+LE LKLNNNGLGI G K ++K+L 
Sbjct: 498 MTAGCKIKELDLSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLGIGG-KQIAKSLT 556

Query: 281 DCYESSKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           +C   S   G  + L LK FIAGRNRLEN GA  LAA FK L+T+E  ++ QNGI+  GI
Sbjct: 557 ECLRKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQNGIHEEGI 616

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            AL  A + N+NLR+L L DNT+  KGA  L + L   P L +LNL DCL++ AG + I 
Sbjct: 617 RALVAALKHNRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLSDCLIRDAGCNYII 676

Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ---INVSENQFGEE 448
            +L    +  L++V L  NE++      L++       L     +++  N FG+E
Sbjct: 677 DHLNPQHHRHLKNVYLCGNELTPPVAKLLIQKWSKFDGLTPKPVLHIHTNSFGDE 731



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/230 (42%), Positives = 138/230 (60%), Gaps = 6/230 (2%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           +G RL  LDLSDNAFG      L + L+S   ++LE L LNNNGLG+ G K + KAL   
Sbjct: 94  SGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALYSLENLILNNNGLGLAG-KTVGKALCSL 152

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            ++SKK G+PL LK F+ GRNRLE E    L+  F KL TLE + +PQNGI   GI AL+
Sbjct: 153 IDASKKAGTPLKLKKFVCGRNRLEVESTIALSDAFIKLGTLEEIRLPQNGIRDDGIIALA 212

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           +AF  NK LR +++NDN    +GAI + + LS L  + +L+LGDC+    G  +I   L 
Sbjct: 213 EAFRMNKKLRIIDINDNFCCPEGAIQISEVLSDLQFIEVLDLGDCVCDDPGVLAIIAELD 272

Query: 402 -TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL--KQINVSENQFGEE 448
             +   L+ V L+ N I+    +D + A  N  K+   ++++S N FG++
Sbjct: 273 KINRDCLKKVVLSGNNIT-SDVIDEIGACFNSPKMCHVKVDISVNMFGKD 321



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 231/510 (45%), Gaps = 69/510 (13%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  F KL TLE + +PQNGI   GI AL++AF  NKKLR +++NDN    +GAI + + 
Sbjct: 183 LSDAFIKLGTLEEIRLPQNGIRDDGIIALAEAFRMNKKLRIIDINDNFCCPEGAIQISEV 242

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           LS L  + +L+LGDC+    G  +I   L   +   L+ V L+ N I+    +D + A  
Sbjct: 243 LSDLQFIEVLDLGDCVCDDPGVLAIIAELDKINRDCLKKVVLSGNNIT-SDVIDEIGACF 301

Query: 120 NKTKL--KQINVSENQFGEEGVEEMEKLMKS---FGMAAALVLEDDEGECSDEEQDEESE 174
           N  K+   ++++S N FG++      +  K    FG      L   + E     +D   E
Sbjct: 302 NSPKMCHVKVDISVNMFGKDFDSAKARHGKGNIDFGRRGDDELLSSDEEEEQGAEDASME 361

Query: 175 EE---NDSDAEGDNSNLSHNDSNHSHN------------ASNQSHNNSNQSHNTSNQSHM 219
           E+      +   D SNL    ++   N              NQ ++N N   +  ++S  
Sbjct: 362 EDAFNTSRETVIDRSNLHEASADEMMNDLMNKGFGCMKIEDNQQNSNGNGMVSFLDKS-- 419

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
                   ++LD +++A   + V   A         +++ L+L  N LGI    +++KAL
Sbjct: 420 --------LKLDTAESAEPVVKVIAAAS--------SMKALELRGNTLGIAAGNVIAKAL 463

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT----LERVEMPQNGIYH 335
               ES  +    L   +F     RL+NE   +L A+ K + T    ++ +++  N    
Sbjct: 464 ----ESHPELERCLWSDLFTG---RLKNEIPPILEALGKAMMTAGCKIKELDLSDNAFGP 516

Query: 336 VGITALSDAFEENK--NLRHLNLNDNTITYKG---AIPLGQALSKLPSLAI-----LNL- 384
           +G  AL D  E     +L  L LN+N +   G   A  L + L K  S+A+     L L 
Sbjct: 517 IGADALKDLLESPSSFSLEVLKLNNNGLGIGGKQIAKSLTECLRK--SIAVGGENRLRLK 574

Query: 385 ----GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
               G   L++ GA ++A       T+E  ++  N I  +G   LV A+K+   L+ + +
Sbjct: 575 TFIAGRNRLENPGAHALAATFKALETVEWFDVRQNGIHEEGIRALVAALKHNRNLRYLWL 634

Query: 441 SENQFGEEGVEEMEKLMKSFGMAAALVLED 470
            +N    +G + + K ++S+     L L D
Sbjct: 635 EDNTVLPKGAKALAKTLESWPKLEVLNLSD 664



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 5/141 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK L+T+E  ++ QNGI+  GI AL  A + N+ LR+L L DNT+  KGA  L + 
Sbjct: 591 LAATFKALETVEWFDVRQNGIHEEGIRALVAALKHNRNLRYLWLEDNTVLPKGAKALAKT 650

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P L +LNL DCL++ AG + I  +L    +  L++V L  NE++      L++   
Sbjct: 651 LESWPKLEVLNLSDCLIRDAGCNYIIDHLNPQHHRHLKNVYLCGNELTPPVAKLLIQKWS 710

Query: 120 NKTKLKQ---INVSENQFGEE 137
               L     +++  N FG+E
Sbjct: 711 KFDGLTPKPVLHIHTNSFGDE 731


>gi|391348856|ref|XP_003748657.1| PREDICTED: ran GTPase-activating protein 1-like [Metaseiulus
           occidentalis]
          Length = 403

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 154/246 (62%), Gaps = 3/246 (1%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           + +G +LVELD S NAFG + +  L  LL +S CF+L EL+L+N GLG +G   L++AL 
Sbjct: 108 ISSGCQLVELDFSGNAFGELAINALYSLLTASTCFSLRELRLHNTGLGPSGGVRLAQALL 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           +C E  K EG+   L+ F+ GR+RLENEGAK LA  F     L+ + +PQNGI+  G+TA
Sbjct: 168 ECLE--KSEGA-FRLETFVCGRSRLENEGAKALAKFFANSPDLKELIIPQNGIFKEGLTA 224

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           + +A      +  LN+NDN ++  GA  +   L++L SL  LN+GDC+L+S GA  +A+ 
Sbjct: 225 IGEALTNCPEILALNVNDNILSAHGAEMIKTYLAQLTSLRYLNVGDCVLRSKGAEHLAEA 284

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           + +   L +++L  NEI +  GL +V+A+ NK  L  + +  N FG++G+  +E  M+  
Sbjct: 285 IQELHDLRELHLGHNEIEIDAGLKIVEAVANKANLSVLELDGNCFGKQGIALIEDRMEKL 344

Query: 461 GMAAAL 466
           G+  AL
Sbjct: 345 GLIEAL 350



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 92/154 (59%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F     L+ + +PQNGI+  G+TA+ +A     ++  LN+NDN ++  GA  +   
Sbjct: 197 LAKFFANSPDLKELIIPQNGIFKEGLTAIGEALTNCPEILALNVNDNILSAHGAEMIKTY 256

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L++L SL  LN+GDC+L+S GA  +A+ + +   L +++L  NEI +  GL +V+A+ NK
Sbjct: 257 LAQLTSLRYLNVGDCVLRSKGAEHLAEAIQELHDLRELHLGHNEIEIDAGLKIVEAVANK 316

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
             L  + +  N FG++G+  +E  M+  G+  AL
Sbjct: 317 ANLSVLELDGNCFGKQGIALIEDRMEKLGLIEAL 350


>gi|71982449|ref|NP_741233.2| Protein RAN-2, isoform a [Caenorhabditis elegans]
 gi|68845661|sp|P34342.3|RGP2_CAEEL RecName: Full=Ran GTPase-activating protein 2; AltName: Full=Ran
           nuclear import/export-related protein 2; AltName:
           Full=RanGAP
 gi|351058542|emb|CCD66004.1| Protein RAN-2, isoform a [Caenorhabditis elegans]
          Length = 960

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 144/235 (61%), Gaps = 8/235 (3%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  G ++ ELDLSDNAFGPIG + L DLL S   F+LE LKLNNNGLGI G K ++K+L 
Sbjct: 535 MTAGCKIKELDLSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLGIGG-KQIAKSLT 593

Query: 281 DCYESSKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           +C   S   G  + L LK FIAGRNRLEN GA  LAA FK L+T+E  ++ QNGI+  GI
Sbjct: 594 ECLRKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQNGIHEEGI 653

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            AL  A + N+NLR+L L DNT+  KGA  L + L   P L +LNL DCL++ AG + I 
Sbjct: 654 RALVAALKHNRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLSDCLIRDAGCNYII 713

Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ---INVSENQFGEE 448
            +L    +  L++V L  NE++      L++       L     +++  N FG+E
Sbjct: 714 DHLNPQHHRHLKNVYLCGNELTPPVAKLLIQKWSKFDGLTPKPVLHIHTNSFGDE 768



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/230 (42%), Positives = 138/230 (60%), Gaps = 6/230 (2%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           +G RL  LDLSDNAFG      L + L+S   ++LE L LNNNGLG+ G K + KAL   
Sbjct: 131 SGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALYSLENLILNNNGLGLAG-KTVGKALCSL 189

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            ++SKK G+PL LK F+ GRNRLE E    L+  F KL TLE + +PQNGI   GI AL+
Sbjct: 190 IDASKKAGTPLKLKKFVCGRNRLEVESTIALSDAFIKLGTLEEIRLPQNGIRDDGIIALA 249

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           +AF  NK LR +++NDN    +GAI + + LS L  + +L+LGDC+    G  +I   L 
Sbjct: 250 EAFRMNKKLRIIDINDNFCCPEGAIQISEVLSDLQFIEVLDLGDCVCDDPGVLAIIAELD 309

Query: 402 -TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL--KQINVSENQFGEE 448
             +   L+ V L+ N I+    +D + A  N  K+   ++++S N FG++
Sbjct: 310 KINRDCLKKVVLSGNNIT-SDVIDEIGACFNSPKMCHVKVDISVNMFGKD 358



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 231/510 (45%), Gaps = 69/510 (13%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  F KL TLE + +PQNGI   GI AL++AF  NKKLR +++NDN    +GAI + + 
Sbjct: 220 LSDAFIKLGTLEEIRLPQNGIRDDGIIALAEAFRMNKKLRIIDINDNFCCPEGAIQISEV 279

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           LS L  + +L+LGDC+    G  +I   L   +   L+ V L+ N I+    +D + A  
Sbjct: 280 LSDLQFIEVLDLGDCVCDDPGVLAIIAELDKINRDCLKKVVLSGNNIT-SDVIDEIGACF 338

Query: 120 NKTKL--KQINVSENQFGEEGVEEMEKLMKS---FGMAAALVLEDDEGECSDEEQDEESE 174
           N  K+   ++++S N FG++      +  K    FG      L   + E     +D   E
Sbjct: 339 NSPKMCHVKVDISVNMFGKDFDSAKARHGKGNIDFGRRGDDELLSSDEEEEQGAEDASME 398

Query: 175 EE---NDSDAEGDNSNLSHNDSNHSHN------------ASNQSHNNSNQSHNTSNQSHM 219
           E+      +   D SNL    ++   N              NQ ++N N   +  ++S  
Sbjct: 399 EDAFNTSRETVIDRSNLHEASADEMMNDLMNKGFGCMKIEDNQQNSNGNGMVSFLDKS-- 456

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
                   ++LD +++A   + V   A         +++ L+L  N LGI    +++KAL
Sbjct: 457 --------LKLDTAESAEPVVKVIAAAS--------SMKALELRGNTLGIAAGNVIAKAL 500

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT----LERVEMPQNGIYH 335
               ES  +    L   +F     RL+NE   +L A+ K + T    ++ +++  N    
Sbjct: 501 ----ESHPELERCLWSDLFTG---RLKNEIPPILEALGKAMMTAGCKIKELDLSDNAFGP 553

Query: 336 VGITALSDAFEENK--NLRHLNLNDNTITYKG---AIPLGQALSKLPSLAI-----LNL- 384
           +G  AL D  E     +L  L LN+N +   G   A  L + L K  S+A+     L L 
Sbjct: 554 IGADALKDLLESPSSFSLEVLKLNNNGLGIGGKQIAKSLTECLRK--SIAVGGENRLRLK 611

Query: 385 ----GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
               G   L++ GA ++A       T+E  ++  N I  +G   LV A+K+   L+ + +
Sbjct: 612 TFIAGRNRLENPGAHALAATFKALETVEWFDVRQNGIHEEGIRALVAALKHNRNLRYLWL 671

Query: 441 SENQFGEEGVEEMEKLMKSFGMAAALVLED 470
            +N    +G + + K ++S+     L L D
Sbjct: 672 EDNTVLPKGAKALAKTLESWPKLEVLNLSD 701



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 5/141 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK L+T+E  ++ QNGI+  GI AL  A + N+ LR+L L DNT+  KGA  L + 
Sbjct: 628 LAATFKALETVEWFDVRQNGIHEEGIRALVAALKHNRNLRYLWLEDNTVLPKGAKALAKT 687

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P L +LNL DCL++ AG + I  +L    +  L++V L  NE++      L++   
Sbjct: 688 LESWPKLEVLNLSDCLIRDAGCNYIIDHLNPQHHRHLKNVYLCGNELTPPVAKLLIQKWS 747

Query: 120 NKTKLKQ---INVSENQFGEE 137
               L     +++  N FG+E
Sbjct: 748 KFDGLTPKPVLHIHTNSFGDE 768


>gi|324502482|gb|ADY41093.1| Ran GTPase-activating protein 2 [Ascaris suum]
          Length = 949

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 99/225 (44%), Positives = 145/225 (64%), Gaps = 3/225 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G +LVELDLSDNAFGPIG EG+   L S   ++L+ LKLNNNGLG  G K+++K+L  C 
Sbjct: 489 GVQLVELDLSDNAFGPIGAEGIEKFLESPAAYSLQVLKLNNNGLG-AGGKVIAKSLKQCC 547

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            ++K++G    LK F+AGRNRLE  GA  LA  F+ + TLE V M QNGI   GI AL+ 
Sbjct: 548 INAKRDGRCFRLKTFVAGRNRLEVPGAIALAEAFQLIGTLEEVTMHQNGIKAKGIEALAS 607

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           +F+ N  LR +NL+DNT T  GA+ + + L  L  + +LNL DCL ++ GA +I   L+ 
Sbjct: 608 SFKCNPKLRVINLSDNTFTVVGALAMAKVLPSLRLIEVLNLSDCLCRNDGAIAIVASLSS 667

Query: 404 --NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
             +  L+++NL+ NE+S +    +V++++   +L+ + +  N  G
Sbjct: 668 LVHFRLKEINLSGNELSAETVEKVVRSLETSFRLQSLVLHTNNLG 712



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 3/209 (1%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G +L ELDLSDNAFGPIG +G+   L S   ++L+ LKLNNNGLG  G K+++K+L  C 
Sbjct: 96  GVQLTELDLSDNAFGPIGADGIEKFLESPAAYSLQVLKLNNNGLG-AGGKIIAKSLKQCC 154

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            ++K++G    L+ F+AGRNRLE  GA   A  F+++ +LE V MPQNGI   GI AL+ 
Sbjct: 155 LNAKQDGRCFRLRTFVAGRNRLEIAGAIAFADAFQEIGSLEEVSMPQNGINAKGIEALAK 214

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-- 401
           +F  N +LR +NL DNT T  GA    + L  L  L  L+ GDCL ++AG  +I   L  
Sbjct: 215 SFRYNAHLRTINLADNTFTAVGARAFAEILPSLNYLETLDFGDCLCRNAGVDAIMANLDP 274

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             + +L+ +NL+ NE++      +++ MK
Sbjct: 275 VKHPSLKTINLSGNELNANTVEKVLQKMK 303



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 107/188 (56%), Gaps = 4/188 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V M QNGI   GI AL+ +F+ N KLR +NL+DNT T  GA+ + + 
Sbjct: 577 LAEAFQLIGTLEEVTMHQNGIKAKGIEALASSFKCNPKLRVINLSDNTFTVVGALAMAKV 636

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L  L  + +LNL DCL ++ GA +I   L+   +  L+++NL+ NE+S +    +V++++
Sbjct: 637 LPSLRLIEVLNLSDCLCRNDGAIAIVASLSSLVHFRLKEINLSGNELSAETVEKVVRSLE 696

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
              +L+ + +  N  G    +E+++   S          DD+G   D E+D E+  + +S
Sbjct: 697 TSFRLQSLVLHTNNLGHR-FDELKQYTSSKAFVDLGEESDDQGSL-DGEEDTETRSDEES 754

Query: 180 DAEGDNSN 187
             EGD+ N
Sbjct: 755 GNEGDDEN 762


>gi|320168283|gb|EFW45182.1| ran GTPase activating protein 1 [Capsaspora owczarzaki ATCC 30864]
          Length = 403

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/235 (42%), Positives = 152/235 (64%), Gaps = 7/235 (2%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L E++ SDNAFGPIG E L+ L+  +    LE +++NNNGLG  G  +++KAL +   S
Sbjct: 99  KLREINFSDNAFGPIGAERLSPLIAGN--RNLEVIRVNNNGLGSIGGTIVAKALCELANS 156

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
            +    P+ L  F+AGRNRLEN+GA  LA  F +LKTL  + MPQNGI+++GI  L++AF
Sbjct: 157 DQ----PVRLHTFVAGRNRLENKGATALAHAFTQLKTLRLIAMPQNGIHYIGIGKLAEAF 212

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-DN 404
             N  L+ ++LNDNT T KG   + +A++ L +L  +N GDCL + AG  ++ + LT  +
Sbjct: 213 VSNPGLQVIDLNDNTFTSKGGKNMAKAIASLKTLKRINFGDCLARKAGGKALIEALTGGH 272

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             LED++L+ NE+       L++A+K  T LKQINV  N+   +GV++++  + S
Sbjct: 273 ELLEDLDLSYNELKPANAEQLIEALKTLTGLKQINVLGNEMSNKGVKKIKAALAS 327



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 95/148 (64%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F +LKTL  + MPQNGI+++GI  L++AF  N  L+ ++LNDNT T KG   + +A
Sbjct: 180 LAHAFTQLKTLRLIAMPQNGIHYIGIGKLAEAFVSNPGLQVIDLNDNTFTSKGGKNMAKA 239

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           ++ L +L  +N GDCL + AG  ++ + LT  +  LED++L+ NE+       L++A+K 
Sbjct: 240 IASLKTLKRINFGDCLARKAGGKALIEALTGGHELLEDLDLSYNELKPANAEQLIEALKT 299

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
            T LKQINV  N+   +GV++++  + S
Sbjct: 300 LTGLKQINVLGNEMSNKGVKKIKAALAS 327



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 25/218 (11%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG-----RNRLENE--- 308
           L+ L L+ N  G+  C  +  AL           +P A  + +        +RL +E   
Sbjct: 37  LQHLTLSGNTFGVEACVAICSAL-----------APHAATLEVVNFSDIFTSRLHSEIRD 85

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
                +A    +  L  +    N    +G   LS     N+NL  + +N+N +   G   
Sbjct: 86  AVTAFSAALVNMPKLREINFSDNAFGPIGAERLSPLIAGNRNLEVIRVNNNGLGSIGGTI 145

Query: 369 LGQALSKLPS------LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
           + +AL +L +      L     G   L++ GA+++A   T   TL  + +  N I   G 
Sbjct: 146 VAKALCELANSDQPVRLHTFVAGRNRLENKGATALAHAFTQLKTLRLIAMPQNGIHYIGI 205

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
             L +A  +   L+ I++++N F  +G + M K + S 
Sbjct: 206 GKLAEAFVSNPGLQVIDLNDNTFTSKGGKNMAKAIASL 243


>gi|291228142|ref|XP_002734024.1| PREDICTED: RAN GTPase activating protein 1-like [Saccoglossus
           kowalevskii]
          Length = 594

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/239 (44%), Positives = 155/239 (64%), Gaps = 20/239 (8%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A LVELDLSDNAFG  GV    +LL+S  C+++ EL+ NNNGLGI G K+LS AL +C++
Sbjct: 113 AHLVELDLSDNAFGADGVRACTELLQSEACYSIRELRFNNNGLGIGGGKILSAALIECHK 172

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
            S   G PL+L++FIAGRNRLEN+GA  LA  FK + TLE V MPQNGI H GI+AL+D+
Sbjct: 173 KSSAAGKPLSLQLFIAGRNRLENDGATALALAFKTIGTLEHVAMPQNGINHQGISALADS 232

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
           F +N  L+                   A + LP L ++N GDCL++SAGA +IA  L   
Sbjct: 233 FAKNDKLK-------------------AFANLPELEVINFGDCLVRSAGAQAIANALEHG 273

Query: 405 TT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
              L+++NL+  EI     L + K++++K  L++++++ N  GEEG++ + ++ +S G+
Sbjct: 274 VPKLKELNLSFGEIKKDAALAVAKSVQSKKNLEKLDLNGNGLGEEGIDSINEIFESVGI 332



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 91/151 (60%), Gaps = 20/151 (13%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK + TLEHV MPQNGI H GI+AL+D+F +N KL+                   A
Sbjct: 201 LALAFKTIGTLEHVAMPQNGINHQGISALADSFAKNDKLK-------------------A 241

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
            + LP L ++N GDCL++SAGA +IA  L      L+++NL+  EI     L + K++++
Sbjct: 242 FANLPELEVINFGDCLVRSAGAQAIANALEHGVPKLKELNLSFGEIKKDAALAVAKSVQS 301

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
           K  L++++++ N  GEEG++ + ++ +S G+
Sbjct: 302 KKNLEKLDLNGNGLGEEGIDSINEIFESVGI 332


>gi|341900725|gb|EGT56660.1| hypothetical protein CAEBREN_04174 [Caenorhabditis brenneri]
          Length = 564

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 143/235 (60%), Gaps = 8/235 (3%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +K GA++ ELDLSDNAFGPIG + L + L S   F+LE LKLNNNGLG+ G K ++++L 
Sbjct: 135 IKAGAKIKELDLSDNAFGPIGADALKEFLESPSAFSLEVLKLNNNGLGVGG-KQIAESLT 193

Query: 281 DCYESSKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           +C   S   G  S L LK FIAG+NRLE  GA  LAA FK L+T+E  ++ QNGI+  GI
Sbjct: 194 ECLRKSIAVGGESRLRLKTFIAGQNRLETPGAHALAATFKSLETVEWFDVRQNGIHEEGI 253

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A+  A + N+NLRHL L DNT+  KGA  L + L   P L +LNL DCL++ AG + + 
Sbjct: 254 RAIVAALKYNRNLRHLWLEDNTVLPKGAKALARTLESWPKLEVLNLSDCLIRDAGCNYVV 313

Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKN---KTKLKQINVSENQFGEE 448
            +L    +  L+ V L  NE++      L++        T    +++  N FG+E
Sbjct: 314 DHLNPQLHRHLKHVYLCGNELTPPVAKLLIQKWAKFDGFTPKPVLHIHTNSFGDE 368



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 5/141 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK L+T+E  ++ QNGI+  GI A+  A + N+ LRHL L DNT+  KGA  L + 
Sbjct: 228 LAATFKSLETVEWFDVRQNGIHEEGIRAIVAALKYNRNLRHLWLEDNTVLPKGAKALART 287

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P L +LNL DCL++ AG + +  +L    +  L+ V L  NE++      L++   
Sbjct: 288 LESWPKLEVLNLSDCLIRDAGCNYVVDHLNPQLHRHLKHVYLCGNELTPPVAKLLIQKWA 347

Query: 120 N---KTKLKQINVSENQFGEE 137
                T    +++  N FG+E
Sbjct: 348 KFDGFTPKPVLHIHTNSFGDE 368


>gi|443686000|gb|ELT89424.1| hypothetical protein CAPTEDRAFT_107728, partial [Capitella teleta]
          Length = 226

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 87/152 (57%), Positives = 116/152 (76%), Gaps = 1/152 (0%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A+L+ELDLSDNAFGP G++GL   L+S  CF+L+EL+LNNNGLGITG K+L+ +L +C+ 
Sbjct: 75  AKLIELDLSDNAFGPNGMQGLVVFLKSPSCFSLKELRLNNNGLGITGGKMLAASLLECHT 134

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
            S   G+PLAL+VF++GR RLENEG+  LA  FK + +LE V MPQNGI+H GITAL++A
Sbjct: 135 KSLAAGTPLALRVFVSGRGRLENEGSMRLAEAFKAIGSLEEVRMPQNGIFHEGITALAEA 194

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
           F  N  L+ L+L+DN  T KGA  + + +SKL
Sbjct: 195 FAFNPKLKILDLSDNIFTEKGASAMAK-VSKL 225



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  FK + +LE V MPQNGI+H GITAL++AF  N KL+ L+L+DN  T KGA  + + 
Sbjct: 163 LAEAFKAIGSLEEVRMPQNGIFHEGITALAEAFAFNPKLKILDLSDNIFTEKGASAMAK- 221

Query: 62  LSKL 65
           +SKL
Sbjct: 222 VSKL 225



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 21/220 (9%)

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
           C  +  L+L  N LG+   K ++KAL    E  +   S +       GR + E   A   
Sbjct: 11  CKEMRWLRLEGNTLGVEAAKGIAKALEKHPEFQRALWSDM-----FTGRLKTEIPDALRF 65

Query: 314 ---AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKGAIP 368
                +    K +E +++  N     G+  L    +     +L+ L LN+N +   G   
Sbjct: 66  LGNGIILANAKLIE-LDLSDNAFGPNGMQGLVVFLKSPSCFSLKELRLNNNGLGITGGKM 124

Query: 369 LGQAL---------SKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           L  +L         +  P +L +   G   L++ G+  +A+      +LE+V +  N I 
Sbjct: 125 LAASLLECHTKSLAAGTPLALRVFVSGRGRLENEGSMRLAEAFKAIGSLEEVRMPQNGIF 184

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +G   L +A     KLK +++S+N F E+G   M K+ K
Sbjct: 185 HEGITALAEAFAFNPKLKILDLSDNIFTEKGASAMAKVSK 224


>gi|393907496|gb|EJD74672.1| leucine Rich Repeat family protein [Loa loa]
          Length = 823

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 146/233 (62%), Gaps = 3/233 (1%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +K G RLVELDLSDNAFGPI  + L + L SS  ++L+ LKLNNNGLG  G K++ KAL 
Sbjct: 98  IKCGTRLVELDLSDNAFGPIAAKELKEFLESSSAYSLKVLKLNNNGLG-AGGKIIGKALI 156

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C+ ++++EG    LK FIAGRNRLE+ GA  LA  F+ L +LE + M Q+GI   GI A
Sbjct: 157 TCHANAQREGQNFRLKTFIAGRNRLEDPGAVALAKAFQVLGSLEEIVMYQDGIRAKGIEA 216

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK- 399
           LS++F  N +L+ +NL+DNT T  GA  + + +  L +L +LN GDCL +  GA +I   
Sbjct: 217 LSESFLYNPSLKIINLSDNTFTVNGARAMAKVVRDLMNLEVLNFGDCLCRDKGALAIISN 276

Query: 400 -YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
             L  ++ L+++NL+ NE+S +    ++  +     LK + +  N  G   V+
Sbjct: 277 ISLPFHSRLKEINLSGNELSPRVVEIILDKVSQGLHLKSLVLHTNNMGARFVQ 329



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 205/467 (43%), Gaps = 82/467 (17%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ L +LE + M Q+GI   GI ALS++F  N  L+ +NL+DNT T  GA  + + 
Sbjct: 189 LAKAFQVLGSLEEIVMYQDGIRAKGIEALSESFLYNPSLKIINLSDNTFTVNGARAMAKV 248

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAK--YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           +  L +L +LN GDCL +  GA +I     L  ++ L+++NL+ NE+S +    ++  + 
Sbjct: 249 VRDLMNLEVLNFGDCLCRDKGALAIISNISLPFHSRLKEINLSGNELSPRVVEIILDKVS 308

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED----DEGECSDEEQDEESEE 175
               LK + +  N  G   V+   K  K   +      +D    DE E SD+ Q+  SEE
Sbjct: 309 QGLHLKSLVLHTNNMGARFVQVKSKCDKYDFIDLGEESDDQGTLDEDEESDDYQELYSEE 368

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
            + S +  ++ +    D N +H+ +    N S +S   S Q+ +S +      E D+   
Sbjct: 369 SHFSYSNNESGDEQVEDGNTTHDVT---INKSLESD--SCQTVISFRNQRWNSEEDV--- 420

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
             G +    L+          L+ L L  N +GI  C+ +++ L                
Sbjct: 421 --GTVTQALLSQKF-------LKVLDLRENYIGIGACRRIAEVL---------------- 455

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
                 R R++             +++LE V + QNG    G+  L  AF  N  L+ + 
Sbjct: 456 ------RERMQ-----------MNMQSLEEVNLSQNGTIAEGMIELVHAFRSNPELKVII 498

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L+ NT+   GAI + + LS L  L +L+L  C     G  ++A  L+ +T L        
Sbjct: 499 LSGNTLNVDGAIAVAEMLSSLRLLEVLDLSSCTCHERGIIAVATNLSSSTHL-------- 550

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
                             +L+ ++ S N  G + ++ + ++  S G 
Sbjct: 551 ------------------RLRVLDFSSNALGADAIQRIVRVFASGGF 579


>gi|312094501|ref|XP_003148043.1| hypothetical protein LOAG_12482 [Loa loa]
          Length = 454

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 146/233 (62%), Gaps = 3/233 (1%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +K G RLVELDLSDNAFGPI  + L + L SS  ++L+ LKLNNNGLG  G K++ KAL 
Sbjct: 28  IKCGTRLVELDLSDNAFGPIAAKELKEFLESSSAYSLKVLKLNNNGLG-AGGKIIGKALI 86

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C+ ++++EG    LK FIAGRNRLE+ GA  LA  F+ L +LE + M Q+GI   GI A
Sbjct: 87  TCHANAQREGQNFRLKTFIAGRNRLEDPGAVALAKAFQVLGSLEEIVMYQDGIRAKGIEA 146

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK- 399
           LS++F  N +L+ +NL+DNT T  GA  + + +  L +L +LN GDCL +  GA +I   
Sbjct: 147 LSESFLYNPSLKIINLSDNTFTVNGARAMAKVVRDLMNLEVLNFGDCLCRDKGALAIISN 206

Query: 400 -YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
             L  ++ L+++NL+ NE+S +    ++  +     LK + +  N  G   V+
Sbjct: 207 ISLPFHSRLKEINLSGNELSPRVVEIILDKVSQGLHLKSLVLHTNNMGARFVQ 259



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 183/409 (44%), Gaps = 77/409 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ L +LE + M Q+GI   GI ALS++F  N  L+ +NL+DNT T  GA  + + 
Sbjct: 119 LAKAFQVLGSLEEIVMYQDGIRAKGIEALSESFLYNPSLKIINLSDNTFTVNGARAMAKV 178

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAK--YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           +  L +L +LN GDCL +  GA +I     L  ++ L+++NL+ NE+S +    ++  + 
Sbjct: 179 VRDLMNLEVLNFGDCLCRDKGALAIISNISLPFHSRLKEINLSGNELSPRVVEIILDKVS 238

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
               LK + +  N  G   V+   K  K   +        D GE SD++   + +EE+D 
Sbjct: 239 QGLHLKSLVLHTNNMGARFVQVKSKCDKYDFI--------DLGEESDDQGTLDEDEESDD 290

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
             E       +++ +H   ++N+S +   +  NT+   H+   T A L +       F  
Sbjct: 291 YQE------LYSEESHFSYSNNESGDEQVEDGNTT---HVGTVTQALLSQ------KF-- 333

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
                            L+ L L  N +GI  C+ +++ L                    
Sbjct: 334 -----------------LKVLDLRENYIGIGACRRIAEVL-------------------- 356

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
             R R++             +++LE V + QNG    G+  L  AF  N  L+ + L+ N
Sbjct: 357 --RERMQ-----------MNMQSLEEVNLSQNGTIAEGMIELVHAFRSNPELKVIILSGN 403

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
           T+   GAI + + LS L  L +L+L  C     G  ++A  L+ +T L 
Sbjct: 404 TLNVDGAIAVAEMLSSLRLLEVLDLSSCTCHERGIIAVATNLSSSTHLR 452


>gi|353231365|emb|CCD77783.1| putative ran gtpase-activating protein [Schistosoma mansoni]
          Length = 744

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/254 (41%), Positives = 160/254 (62%), Gaps = 8/254 (3%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +++VELDLSDNAFGP GV G+ DLL S+ C  LE L++NN GLG  GC+ L++AL +   
Sbjct: 102 SQIVELDLSDNAFGPNGVVGITDLLASNTCHTLEILRMNNQGLGHEGCRYLAEALEEGRC 161

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT---AL 341
            SK +G  L LK+F  GRNRLEN GA+ML+ VF  + +LE + + QNGI   GI    +L
Sbjct: 162 LSKNQG--LLLKIFSGGRNRLENVGAQMLSKVFCDMGSLEELSLYQNGIGIHGIDGILSL 219

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
               + + NLR LNL+DN++T +G   + +AL  + +L  L L DC+L+S G  ++A   
Sbjct: 220 VKIIKSSPNLRVLNLSDNSLTPRGGEAIARALPSVVNLEELYLSDCILRSTGVKALASAF 279

Query: 402 TDNTT---LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            D  T   L  +NLT NEI +  G++L+ ++ NK+ L+ ++++ N+FG  GV  + + + 
Sbjct: 280 EDPDTTPNLRVLNLTGNEIKLSAGINLILSLGNKSHLELLDLNANEFGRSGVRSIIQTLD 339

Query: 459 SFGMAAALVLEDDE 472
           S G+   L   +D+
Sbjct: 340 SVGLLHTLPNPNDK 353



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 128/238 (53%), Gaps = 22/238 (9%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGIT---ALSDAFEENKKLRHLNLNDNTITYKGAIP 57
           ML+ VF  + +LE + + QNGI   GI    +L    + +  LR LNL+DN++T +G   
Sbjct: 187 MLSKVFCDMGSLEELSLYQNGIGIHGIDGILSLVKIIKSSPNLRVLNLSDNSLTPRGGEA 246

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT---LEDVNLTCNEISVQGGLDL 114
           + +AL  + +L  L L DC+L+S G  ++A    D  T   L  +NLT NEI +  G++L
Sbjct: 247 IARALPSVVNLEELYLSDCILRSTGVKALASAFEDPDTTPNLRVLNLTGNEIKLSAGINL 306

Query: 115 VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL------------VLEDDEG 162
           + ++ NK+ L+ ++++ N+FG  GV  + + + S G+   L            V+E+   
Sbjct: 307 ILSLGNKSHLELLDLNANEFGRSGVRSIIQTLDSVGLLHTLPNPNDKDLSSISVVEESYL 366

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNS----NQSHNTSNQ 216
              DE+Q  + E E+D   EG+  ++ +ND+    ++ ++  ++     NQ+  TS+Q
Sbjct: 367 WAFDEDQGSDQEGEDDETNEGEEEDVDNNDAEEYDDSRSRYGDDDDERENQTDTTSDQ 424


>gi|256086166|ref|XP_002579275.1| ran gtpase-activating protein [Schistosoma mansoni]
          Length = 688

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/254 (41%), Positives = 160/254 (62%), Gaps = 8/254 (3%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +++VELDLSDNAFGP GV G+ DLL S+ C  LE L++NN GLG  GC+ L++AL +   
Sbjct: 102 SQIVELDLSDNAFGPNGVVGITDLLASNTCHTLEILRMNNQGLGHEGCRYLAEALEEGRC 161

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT---AL 341
            SK +G  L LK+F  GRNRLEN GA+ML+ VF  + +LE + + QNGI   GI    +L
Sbjct: 162 LSKNQG--LLLKIFSGGRNRLENVGAQMLSKVFCDMGSLEELSLYQNGIGIHGIDGILSL 219

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
               + + NLR LNL+DN++T +G   + +AL  + +L  L L DC+L+S G  ++A   
Sbjct: 220 VKIIKSSPNLRVLNLSDNSLTPRGGEAIARALPSVVNLEELYLSDCILRSTGVKALASAF 279

Query: 402 TDNTT---LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            D  T   L  +NLT NEI +  G++L+ ++ NK+ L+ ++++ N+FG  GV  + + + 
Sbjct: 280 EDPDTTPNLRVLNLTGNEIKLSAGINLILSLGNKSHLELLDLNANEFGRSGVRSIIQTLD 339

Query: 459 SFGMAAALVLEDDE 472
           S G+   L   +D+
Sbjct: 340 SVGLLHTLPNPNDK 353



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 115/211 (54%), Gaps = 18/211 (8%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGIT---ALSDAFEENKKLRHLNLNDNTITYKGAIP 57
           ML+ VF  + +LE + + QNGI   GI    +L    + +  LR LNL+DN++T +G   
Sbjct: 187 MLSKVFCDMGSLEELSLYQNGIGIHGIDGILSLVKIIKSSPNLRVLNLSDNSLTPRGGEA 246

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT---LEDVNLTCNEISVQGGLDL 114
           + +AL  + +L  L L DC+L+S G  ++A    D  T   L  +NLT NEI +  G++L
Sbjct: 247 IARALPSVVNLEELYLSDCILRSTGVKALASAFEDPDTTPNLRVLNLTGNEIKLSAGINL 306

Query: 115 VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL------------VLEDDEG 162
           + ++ NK+ L+ ++++ N+FG  GV  + + + S G+   L            V+E+   
Sbjct: 307 ILSLGNKSHLELLDLNANEFGRSGVRSIIQTLDSVGLLHTLPNPNDKDLSSISVVEESYL 366

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDS 193
              DE+Q  + E E+D   EG+  ++ +ND+
Sbjct: 367 WAFDEDQGSDQEGEDDETNEGEEEDVDNNDA 397


>gi|332230976|ref|XP_003264669.1| PREDICTED: ran GTPase-activating protein 1 [Nomascus leucogenys]
          Length = 575

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/199 (44%), Positives = 132/199 (66%), Gaps = 1/199 (0%)

Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
           I    +L+ AL +C+  S  +G PL+LKVF+AGRNRLEN+GA  LA  F+ + TLE V M
Sbjct: 145 IPPALILAAALTECHRKSSAQGKPLSLKVFVAGRNRLENDGATALAEAFRVIGTLEEVHM 204

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
           PQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL
Sbjct: 205 PQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCL 264

Query: 389 LKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
           ++S GA +IA  +      L+++NL+  EI     L + +AM +K +L++++++ N  GE
Sbjct: 265 VRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGE 324

Query: 448 EGVEEMEKLMKSFGMAAAL 466
           EG E+++++++ F MA  L
Sbjct: 325 EGCEQLQEVLEGFNMAKVL 343



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 101/155 (65%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 189 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 248

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +
Sbjct: 249 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 308

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++++ F MA  L
Sbjct: 309 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 343


>gi|170591789|ref|XP_001900652.1| Leucine Rich Repeat family protein [Brugia malayi]
 gi|158591804|gb|EDP30407.1| Leucine Rich Repeat family protein [Brugia malayi]
          Length = 595

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 136/230 (59%), Gaps = 17/230 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           ++ G RLVELDLSDNAFGP+G +GL + L SS  ++LE               ++ KAL 
Sbjct: 98  IRCGTRLVELDLSDNAFGPVGAKGLEEFLESSSAYSLE---------------IIGKALI 142

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C+ +++K+G    LK F+AGRNRLE+ GA  LA  F+ L +LE + M Q+GI   GI A
Sbjct: 143 RCHINAQKDGQIFQLKTFVAGRNRLEDPGAFALAEAFQVLGSLEEITMYQDGIRAKGIEA 202

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK- 399
           LS++F  N NLR +NL+DNT T  GA  + + +  L +L ILN GDCL +  GA +I   
Sbjct: 203 LSESFRYNPNLRIINLSDNTFTVSGACAMAKVVRDLMNLEILNFGDCLCRDKGALAIISN 262

Query: 400 -YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
             L  ++ L+++NL+ NE+S +    ++  +     LK + +  N  G +
Sbjct: 263 ISLLSHSHLKEINLSGNELSPRAVEIILDRVSQGLHLKSLVLHTNNMGAQ 312



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 207/468 (44%), Gaps = 89/468 (19%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ L +LE + M Q+GI   GI ALS++F  N  LR +NL+DNT T  GA  + + 
Sbjct: 175 LAEAFQVLGSLEEITMYQDGIRAKGIEALSESFRYNPNLRIINLSDNTFTVSGACAMAKV 234

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAK--YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           +  L +L ILN GDCL +  GA +I     L  ++ L+++NL+ NE+S +    ++  + 
Sbjct: 235 VRDLMNLEILNFGDCLCRDKGALAIISNISLLSHSHLKEINLSGNELSPRAVEIILDRVS 294

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK-SFGMAAALVLEDDEGECSDEEQDEESEEEND 178
               LK + +  N  G +  E   K  K SF          D GE SD++   + +E ND
Sbjct: 295 QGLHLKSLVLHTNNMGAQFDEVKSKCNKYSF---------IDLGEESDDQGTLDEDEGND 345

Query: 179 SDAE----GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSD 234
              E      +S+ S+N+S +       + + S ++ +   Q+ +S K      E D   
Sbjct: 346 VCQEFYSEESHSSYSNNESGYEKMKDGSTFHRSLEADDY--QTVISFKNQQWNSEDD--- 400

Query: 235 NAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLA 294
                  VE +   L S     +  L L+ N +GI  C  +++ L               
Sbjct: 401 -------VEAVTQALLSRKFVKV--LDLHRNYIGINACTRIAEVL--------------- 436

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
                  R R+E             ++++E V + QNGI   G+  L  AF  N NL+ +
Sbjct: 437 -------RKRME-----------MNMQSIEEVNLSQNGITAEGMVQLVHAFRSNPNLKVI 478

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            L+ NT+ ++GAI + + L  L SL IL+L  C     G  ++A  L  +T L       
Sbjct: 479 VLSGNTLEFEGAISVAEVLPSLRSLEILDLSSCACHERGILAVAANLNSSTHL------- 531

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
                              +LK ++ S N  G + ++++ ++  S G 
Sbjct: 532 -------------------RLKVLDFSSNALGADAIQQIVRIFSSGGF 560


>gi|426394594|ref|XP_004063577.1| PREDICTED: ran GTPase-activating protein 1 isoform 4 [Gorilla
           gorilla gorilla]
          Length = 532

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 139/247 (56%), Gaps = 46/247 (18%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K++     
Sbjct: 98  ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKVIG---- 153

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                                                    TLE V MPQNGI H GITA
Sbjct: 154 -----------------------------------------TLEEVHMPQNGINHPGITA 172

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 173 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 232

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 233 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 292

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 293 FNMAKVL 299



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 98/150 (65%), Gaps = 1/150 (0%)

Query: 7   KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + L  L 
Sbjct: 150 KVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 209

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +K +L+
Sbjct: 210 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 269

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           +++++ N  GEEG E+++++++ F MA  L
Sbjct: 270 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 299


>gi|332859889|ref|XP_003317309.1| PREDICTED: ran GTPase-activating protein 1 [Pan troglodytes]
          Length = 532

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 139/247 (56%), Gaps = 46/247 (18%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K++     
Sbjct: 98  ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKVIG---- 153

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                                                    TLE V MPQNGI H GITA
Sbjct: 154 -----------------------------------------TLEEVHMPQNGINHPGITA 172

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 173 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 232

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 233 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 292

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 293 FNMAKVL 299



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 98/150 (65%), Gaps = 1/150 (0%)

Query: 7   KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + L  L 
Sbjct: 150 KVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 209

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +K +L+
Sbjct: 210 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 269

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           +++++ N  GEEG E+++++++ F MA  L
Sbjct: 270 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 299


>gi|397487152|ref|XP_003814671.1| PREDICTED: ran GTPase-activating protein 1 [Pan paniscus]
          Length = 530

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 139/247 (56%), Gaps = 46/247 (18%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K++     
Sbjct: 98  ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKVIG---- 153

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                                                    TLE V MPQNGI H GITA
Sbjct: 154 -----------------------------------------TLEEVHMPQNGINHPGITA 172

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 173 LAQAFAVNLLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 232

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 233 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 292

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 293 FNMAKVL 299



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 98/150 (65%), Gaps = 1/150 (0%)

Query: 7   KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K + TLE V MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + L  L 
Sbjct: 150 KVIGTLEEVHMPQNGINHPGITALAQAFAVNLLLRVINLNDNTFTEKGAVAMAETLKTLR 209

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +K +L+
Sbjct: 210 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 269

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           +++++ N  GEEG E+++++++ F MA  L
Sbjct: 270 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 299


>gi|194378826|dbj|BAG63578.1| unnamed protein product [Homo sapiens]
          Length = 532

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 139/247 (56%), Gaps = 46/247 (18%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L+ELKLNN G+GI G K++     
Sbjct: 98  ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKVIG---- 153

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                                                    TLE V MPQNGI H GITA
Sbjct: 154 -----------------------------------------TLEEVHMPQNGINHPGITA 172

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            + AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDCL++S GA +IA  
Sbjct: 173 PAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 232

Query: 401 LTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +      L+++NL+  EI     L + +AM +K +L++++++ N  GEEG E+++++++ 
Sbjct: 233 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 292

Query: 460 FGMAAAL 466
           F MA  L
Sbjct: 293 FNMAKVL 299



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 97/150 (64%), Gaps = 1/150 (0%)

Query: 7   KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K + TLE V MPQNGI H GITA + AF  N  LR +NLNDNT T KGA+ + + L  L 
Sbjct: 150 KVIGTLEEVHMPQNGINHPGITAPAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 209

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +AM +K +L+
Sbjct: 210 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 269

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           +++++ N  GEEG E+++++++ F MA  L
Sbjct: 270 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 299


>gi|328769777|gb|EGF79820.1| hypothetical protein BATDEDRAFT_19906 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 387

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 149/238 (62%), Gaps = 6/238 (2%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LV+LDLSDNAFGP G + L  LL ++    +E L+LNNNGLGI G +L+S+AL +  + +
Sbjct: 96  LVDLDLSDNAFGPAGAKPLMRLLTNN--RNIETLRLNNNGLGIEGGRLVSEALIEAQKLN 153

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAF 345
           + E    +LKV I GRNRLE+ GA   A  F+   K+L  V MPQN I   GI+ L  + 
Sbjct: 154 EAESRISSLKVVIVGRNRLESAGAGHFAKAFEAHKKSLHTVRMPQNSIRPEGISNLLTSL 213

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-DN 404
            +   L +L+L DNT T +G++ L   +   P+L +L++GDCLLK++G+ +I K LT ++
Sbjct: 214 RQCDKLEYLDLQDNTFTREGSLALAAGIPHWPNLRVLDIGDCLLKTSGSGAIIKALTSES 273

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE--EGVEEMEKLMKSF 460
           T LE +NL+ NEI     + LV  + NKT ++ I ++ N F    + V  + ++++++
Sbjct: 274 TKLEHLNLSFNEIKEPAAMLLVMMLANKTCIESIQLNGNIFESDCDSVNSIRRMLETY 331



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 88/143 (61%), Gaps = 3/143 (2%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K+L  V MPQN I   GI+ L  +  +  KL +L+L DNT T +G++ L   +   P+L 
Sbjct: 189 KSLHTVRMPQNSIRPEGISNLLTSLRQCDKLEYLDLQDNTFTREGSLALAAGIPHWPNLR 248

Query: 70  ILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
           +L++GDCLLK++G+ +I K LT ++T LE +NL+ NEI     + LV  + NKT ++ I 
Sbjct: 249 VLDIGDCLLKTSGSGAIIKALTSESTKLEHLNLSFNEIKEPAAMLLVMMLANKTCIESIQ 308

Query: 129 VSENQFGE--EGVEEMEKLMKSF 149
           ++ N F    + V  + ++++++
Sbjct: 309 LNGNIFESDCDSVNSIRRMLETY 331



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 39/153 (25%)

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL---------------------- 373
           + + A  +AFE+ K+L  L+L+DN     GA PL + L                      
Sbjct: 81  LALDAFVEAFEDKKHLVDLDLSDNAFGPAGAKPLMRLLTNNRNIETLRLNNNGLGIEGGR 140

Query: 374 ----------------SKLPSLAILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNLTCNE 416
                           S++ SL ++ +G   L+SAGA   AK +     +L  V +  N 
Sbjct: 141 LVSEALIEAQKLNEAESRISSLKVVIVGRNRLESAGAGHFAKAFEAHKKSLHTVRMPQNS 200

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           I  +G  +L+ +++   KL+ +++ +N F  EG
Sbjct: 201 IRPEGISNLLTSLRQCDKLEYLDLQDNTFTREG 233



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 39/153 (25%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL---------------------- 62
           + + A  +AFE+ K L  L+L+DN     GA PL + L                      
Sbjct: 81  LALDAFVEAFEDKKHLVDLDLSDNAFGPAGAKPLMRLLTNNRNIETLRLNNNGLGIEGGR 140

Query: 63  ----------------SKLPSLAILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNLTCNE 105
                           S++ SL ++ +G   L+SAGA   AK +     +L  V +  N 
Sbjct: 141 LVSEALIEAQKLNEAESRISSLKVVIVGRNRLESAGAGHFAKAFEAHKKSLHTVRMPQNS 200

Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           I  +G  +L+ +++   KL+ +++ +N F  EG
Sbjct: 201 IRPEGISNLLTSLRQCDKLEYLDLQDNTFTREG 233


>gi|443714715|gb|ELU06997.1| hypothetical protein CAPTEDRAFT_106804, partial [Capitella teleta]
          Length = 200

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/126 (58%), Positives = 98/126 (77%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A+L+ELDLSDNAFGP G++GL   L+S  CF+L+EL+LNNNGLGITG K+L+ +L +C+ 
Sbjct: 75  AKLIELDLSDNAFGPNGMQGLVVFLKSPSCFSLKELRLNNNGLGITGGKMLAASLLECHT 134

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
            S   G+PLAL+VF++GR RLENEG+  LA  FK + +LE V MPQNGI+H GITAL++A
Sbjct: 135 KSLAAGTPLALRVFVSGRGRLENEGSMRLAEAFKAIGSLEEVRMPQNGIFHEGITALAEA 194

Query: 345 FEENKN 350
               +N
Sbjct: 195 LPSTQN 200



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK 38
           LA  FK + +LE V MPQNGI+H GITAL++A    +
Sbjct: 163 LAEAFKAIGSLEEVRMPQNGIFHEGITALAEALPSTQ 199


>gi|449664352|ref|XP_002155956.2| PREDICTED: ran GTPase-activating protein 1-like [Hydra
           magnipapillata]
          Length = 528

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/199 (44%), Positives = 125/199 (62%), Gaps = 2/199 (1%)

Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
           I   ++L+ A   C+ SSK   +P ALKVFI+GRNRLENEGAK L+  FK L +LE + M
Sbjct: 113 ICMLQILADAFITCHNSSKLTRTPFALKVFISGRNRLENEGAKALSEAFKILGSLEEITM 172

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
           PQNGI   GI  L++AF++N NL+ +N+NDNT T  GA  L + +  L +L  LN+GDCL
Sbjct: 173 PQNGIRPEGIVYLAEAFQKNTNLKIININDNTCTESGAKALAKCIPSLLNLETLNVGDCL 232

Query: 389 LK-SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
           LK S   +         T L+++ L+ NEI   GGL + K+M NK  L+ +N+  NQ G 
Sbjct: 233 LKDSGALALAGALNAKMTNLKEIILSFNEIRRDGGLAIAKSMANKEALQMLNLDGNQLG- 291

Query: 448 EGVEEMEKLMKSFGMAAAL 466
           + ++E+++LM   G   AL
Sbjct: 292 DSIKEIKRLMTDIGNVQAL 310



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 2/155 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+  FK L +LE + MPQNGI   GI  L++AF++N  L+ +N+NDNT T  GA  L + 
Sbjct: 157 LSEAFKILGSLEEITMPQNGIRPEGIVYLAEAFQKNTNLKIININDNTCTESGAKALAKC 216

Query: 62  LSKLPSLAILNLGDCLLK-SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +  L +L  LN+GDCLLK S   +         T L+++ L+ NEI   GGL + K+M N
Sbjct: 217 IPSLLNLETLNVGDCLLKDSGALALAGALNAKMTNLKEIILSFNEIRRDGGLAIAKSMAN 276

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K  L+ +N+  NQ G + ++E+++LM   G   AL
Sbjct: 277 KEALQMLNLDGNQLG-DSIKEIKRLMTDIGNVQAL 310


>gi|341900609|gb|EGT56544.1| hypothetical protein CAEBREN_10109 [Caenorhabditis brenneri]
          Length = 681

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 5/211 (2%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +K GA++ ELDLSDN+FGPIG   L + L S   F+LE LKLNNNGLG+ G K ++++L 
Sbjct: 109 IKAGAKIKELDLSDNSFGPIGANALKEFLESPSAFSLEVLKLNNNGLGVGG-KQIAESLT 167

Query: 281 DCYESSKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           +C   S   G  S L LK FIAGRNRLE+ G   LAA FK L+T+E +++ +N I   GI
Sbjct: 168 ECLRKSIAVGGESRLRLKTFIAGRNRLESPGVYALAATFKSLETVEWLDVRENDITDRGI 227

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A+ DA + N+NLRHL L +N +  +    L + L   P L +LNL  CL+   G + + 
Sbjct: 228 RAIVDALKYNRNLRHLWLEENGMLLESVKELAKTLESWPKLEVLNLSYCLIDEVGCNYLV 287

Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVK 427
            +L    +  L+ V L  N+++      L++
Sbjct: 288 DHLNPQLHRHLKHVYLCHNDLAAPVAKSLIQ 318



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 2/117 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA FK L+T+E +++ +N I   GI A+ DA + N+ LRHL L +N +  +    L + 
Sbjct: 202 LAATFKSLETVEWLDVRENDITDRGIRAIVDALKYNRNLRHLWLEENGMLLESVKELAKT 261

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVK 116
           L   P L +LNL  CL+   G + +  +L    +  L+ V L  N+++      L++
Sbjct: 262 LESWPKLEVLNLSYCLIDEVGCNYLVDHLNPQLHRHLKHVYLCHNDLAAPVAKSLIQ 318



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 28/224 (12%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           +++ L+L  N LGI   K ++KAL    E  +   S L      AGR  LE+E   +L A
Sbjct: 51  SMKALELRGNKLGIEAGKEIAKALETHPELERCLWSDL-----FAGR--LEHEIPPILEA 103

Query: 316 V----FKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTITYKG---A 366
           +     K    ++ +++  N    +G  AL +  E     +L  L LN+N +   G   A
Sbjct: 104 LGRGMIKAGAKIKELDLSDNSFGPIGANALKEFLESPSAFSLEVLKLNNNGLGVGGKQIA 163

Query: 367 IPLGQALSKLPSLAI-----LNL-----GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             L + L K  S+A+     L L     G   L+S G  ++A       T+E +++  N+
Sbjct: 164 ESLTECLRK--SIAVGGESRLRLKTFIAGRNRLESPGVYALAATFKSLETVEWLDVREND 221

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           I+ +G   +V A+K    L+ + + EN    E V+E+ K ++S+
Sbjct: 222 ITDRGIRAIVDALKYNRNLRHLWLEENGMLLESVKELAKTLESW 265


>gi|196005969|ref|XP_002112851.1| hypothetical protein TRIADDRAFT_56415 [Trichoplax adhaerens]
 gi|190584892|gb|EDV24961.1| hypothetical protein TRIADDRAFT_56415 [Trichoplax adhaerens]
          Length = 497

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/265 (40%), Positives = 154/265 (58%), Gaps = 27/265 (10%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A LVE+DLSDNAFGP G+  +  LL     + ++ LKLNNNGLG  G K+L+ AL +CY+
Sbjct: 111 ASLVEIDLSDNAFGPDGINAVKSLLSGRPGYTIKTLKLNNNGLGPNGGKILAAALRECYK 170

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           +S   G   +LK FI GRNRLE  G++ LA+ FK + TLE V MPQNGI   GI  L  A
Sbjct: 171 NS---GDKFSLKTFICGRNRLEIAGSEALASAFKIIGTLEDVSMPQNGIKSEGIVPLVCA 227

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQ---------------ALSKLPSLAILNLGDCLL 389
              NK+L+ LNLNDN  +  G+  L +               A++  P L  LN+GDCLL
Sbjct: 228 LACNKSLKRLNLNDNIFSQDGSKALAEVSLFCNWFCEKHCRKAMANWPYLQYLNVGDCLL 287

Query: 390 KSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
            S GA +IA  +   N  L++V +  N+I     + L  A+KN + L++++++       
Sbjct: 288 GSDGAIAIANVIEKHNPNLQEVLVDSNDIETDAAIKLATALKNCSSLQKLDIN------- 340

Query: 449 GVEEMEKLMKSFGMAAALV-LEDDE 472
           G+EE++  ++   +A +L  L DDE
Sbjct: 341 GIEELKHCIEGSVVADSLCSLSDDE 365



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 30/227 (13%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ- 60
           LA+ FK + TLE V MPQNGI   GI  L  A   NK L+ LNLNDN  +  G+  L + 
Sbjct: 196 LASAFKIIGTLEDVSMPQNGIKSEGIVPLVCALACNKSLKRLNLNDNIFSQDGSKALAEV 255

Query: 61  --------------ALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNE 105
                         A++  P L  LN+GDCLL S GA +IA  +   N  L++V +  N+
Sbjct: 256 SLFCNWFCEKHCRKAMANWPYLQYLNVGDCLLGSDGAIAIANVIEKHNPNLQEVLVDSND 315

Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDDEG-- 162
           I     + L  A+KN + L++++++       G+EE++  ++   +A +L  L DDEG  
Sbjct: 316 IETDAAIKLATALKNCSSLQKLDIN-------GIEELKHCIEGSVVADSLCSLSDDEGLL 368

Query: 163 -ECSDEEQDEESEEENDSDAEG---DNSNLSHNDSNHSHNASNQSHN 205
            E  D+    ++EEE   D  G   ++S L     + + +AS +S N
Sbjct: 369 DEAEDDSDASDAEEEPGDDTTGKLIEDSELHVTGKSVTPDASPRSLN 415


>gi|58266704|ref|XP_570508.1| Ran GTPase activator [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134110884|ref|XP_775906.1| hypothetical protein CNBD3140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258572|gb|EAL21259.1| hypothetical protein CNBD3140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226741|gb|AAW43201.1| Ran GTPase activator, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 404

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/252 (42%), Positives = 144/252 (57%), Gaps = 11/252 (4%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVELDLSDNAFG    + L   L+S+  F +   KLNNNGLG  G  +++KAL D     
Sbjct: 95  LVELDLSDNAFGGRCADALVPFLQSNTHFQI--FKLNNNGLGPWGGSVVAKALLDNAAKC 152

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           +KEG   +LKV + GRNRLEN  A   A  F K + L+ V+MPQNGI   GI AL++   
Sbjct: 153 EKEGKESSLKVVVCGRNRLENGSAPDWAEAFGKHRNLKEVKMPQNGIRMEGIQALAEGLS 212

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DN 404
             K L HL+L DNT T  G   + + L   P+L  LNL DCLL SAG  ++A  L+   N
Sbjct: 213 NCKELEHLDLQDNTATKTGTRAIVKHLGSWPNLKHLNLSDCLLGSAGGIALATSLSLGSN 272

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE---NQFGE--EGVEEMEKLMKS 459
             LE + L   E+  +  ++L+    ++  LK++ V E   N+F E  E VEE++K ++ 
Sbjct: 273 PKLESLKLQYGEMDKR-AIELLSVAISQ-HLKELTVLELNGNRFSEDDECVEELKKALEL 330

Query: 460 FGMAAALVLEDD 471
           +G   AL   DD
Sbjct: 331 WGHEEALDELDD 342



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 9/166 (5%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A  F K + L+ V+MPQNGI   GI AL++     K+L HL+L DNT T  G   + + 
Sbjct: 179 WAEAFGKHRNLKEVKMPQNGIRMEGIQALAEGLSNCKELEHLDLQDNTATKTGTRAIVKH 238

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P+L  LNL DCLL SAG  ++A  L+   N  LE + L   E+  +  ++L+    
Sbjct: 239 LGSWPNLKHLNLSDCLLGSAGGIALATSLSLGSNPKLESLKLQYGEMDKR-AIELLSVAI 297

Query: 120 NKTKLKQINVSE---NQFGE--EGVEEMEKLMKSFGMAAALVLEDD 160
           ++  LK++ V E   N+F E  E VEE++K ++ +G   AL   DD
Sbjct: 298 SQ-HLKELTVLELNGNRFSEDDECVEELKKALELWGHEEALDELDD 342



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 28/175 (16%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERV------------EMPQNGIYHVGITALSDAFEEN 348
           G N L  E  + +A+V KK   L+ V            E+PQ       ++AL +A  ++
Sbjct: 39  GGNSLGVEACEAIASVLKKKTNLKVVDLADIFTGRLISEIPQ------ALSALCNALSDH 92

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN---- 404
            +L  L+L+DN    + A  L   L       I  L +  L   G S +AK L DN    
Sbjct: 93  TSLVELDLSDNAFGGRCADALVPFLQSNTHFQIFKLNNNGLGPWGGSVVAKALLDNAAKC 152

Query: 405 ------TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
                 ++L+ V    N +      D  +A      LK++ + +N    EG++ +
Sbjct: 153 EKEGKESSLKVVVCGRNRLENGSAPDWAEAFGKHRNLKEVKMPQNGIRMEGIQAL 207


>gi|194764390|ref|XP_001964313.1| GF20782 [Drosophila ananassae]
 gi|190619238|gb|EDV34762.1| GF20782 [Drosophila ananassae]
          Length = 375

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 145/263 (55%), Gaps = 8/263 (3%)

Query: 217 SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS 276
           +H  +   ++L  LDL  N  G  G  GL  +L S  C+ L+EL L+N  L      +L+
Sbjct: 90  AHGLMAADSQLTVLDLGMNNLGTDGFIGLDAILCSRSCYTLQELHLDNCSLMPHATDMLA 149

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
            +L   Y+S+KK  +PL L+V   G N +E EG   L  VFK +KTLE +++ QN I+  
Sbjct: 150 HSLFQLYQSAKKANTPLKLRVITLGNNSMEVEGCSQLCEVFKVMKTLEVIDLKQNDIFLE 209

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L++A   N  LR  N+NDN ++ +G   +   L +L  L  ++ GDCL+ + GA  
Sbjct: 210 GVDTLAEALAANLQLRIFNMNDNILS-EGLEGICMVLPQLTMLREIDFGDCLIGNKGAFQ 268

Query: 397 IAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           ++  L ++   LE ++L  N I V GGL +VK++KNK  L+ + +  N FG  G + + +
Sbjct: 269 LSHALFNHLNHLEFLDLGFNHICVDGGLAVVKSLKNKANLRYLYLGGNCFGSRGCQRILR 328

Query: 456 LMKSFGMAAAL------VLEDDE 472
            MK    AAAL      V EDDE
Sbjct: 329 EMKKLPTAAALGPFDEDVSEDDE 351



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 8/184 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  VFK +KTLE +++ QN I+  G+  L++A   N +LR  N+NDN ++ +G   +   
Sbjct: 186 LCEVFKVMKTLEVIDLKQNDIFLEGVDTLAEALAANLQLRIFNMNDNILS-EGLEGICMV 244

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           L +L  L  ++ GDCL+ + GA  ++  L ++   LE ++L  N I V GGL +VK++KN
Sbjct: 245 LPQLTMLREIDFGDCLIGNKGAFQLSHALFNHLNHLEFLDLGFNHICVDGGLAVVKSLKN 304

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL------VLEDDEGECSDEEQDEESE 174
           K  L+ + +  N FG  G + + + MK    AAAL      V EDDE        DEE  
Sbjct: 305 KANLRYLYLGGNCFGSRGCQRILREMKKLPTAAALGPFDEDVSEDDEFYVDTSFDDEEGF 364

Query: 175 EEND 178
           +  D
Sbjct: 365 DATD 368


>gi|321257639|ref|XP_003193660.1| ran GTPase activator [Cryptococcus gattii WM276]
 gi|317460130|gb|ADV21873.1| Ran GTPase activator, putative [Cryptococcus gattii WM276]
          Length = 410

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/250 (40%), Positives = 140/250 (56%), Gaps = 7/250 (2%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVELDLSDNAFG    + L   L+S+  F +   KLNNNGLG  G  +++KAL D     
Sbjct: 95  LVELDLSDNAFGGRCADALVPFLQSNTHFQI--FKLNNNGLGPWGGSVIAKALLDNAAKC 152

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           +KEG   +L+V + GRNRLEN  A   A  F K + L+ V+MPQNGI   GI AL++   
Sbjct: 153 EKEGKESSLRVIVCGRNRLENGSAPDWAEAFGKHRNLKEVKMPQNGIRMEGIQALAEGLS 212

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DN 404
             + L HL+L DNT T  G   + + L   P+L  LNL DCLL SAG  ++A  L+   N
Sbjct: 213 NCRELEHLDLQDNTATKTGTRAIVKHLCSWPNLKHLNLSDCLLGSAGGIALATSLSLGSN 272

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEG--VEEMEKLMKSFG 461
             LE + L   E+  +    L  A+    K L  + ++ N+F E+   VEE++K ++ +G
Sbjct: 273 PKLESLKLQYGEMDKRAVELLSIAISQHLKELTVLELNGNRFYEDDDCVEELKKALELWG 332

Query: 462 MAAALVLEDD 471
              AL   DD
Sbjct: 333 HEEALDELDD 342



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A  F K + L+ V+MPQNGI   GI AL++     ++L HL+L DNT T  G   + + 
Sbjct: 179 WAEAFGKHRNLKEVKMPQNGIRMEGIQALAEGLSNCRELEHLDLQDNTATKTGTRAIVKH 238

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P+L  LNL DCLL SAG  ++A  L+   N  LE + L   E+  +    L  A+ 
Sbjct: 239 LCSWPNLKHLNLSDCLLGSAGGIALATSLSLGSNPKLESLKLQYGEMDKRAVELLSIAIS 298

Query: 120 NKTK-LKQINVSENQFGEEG--VEEMEKLMKSFGMAAALVLEDD 160
              K L  + ++ N+F E+   VEE++K ++ +G   AL   DD
Sbjct: 299 QHLKELTVLELNGNRFYEDDDCVEELKKALELWGHEEALDELDD 342



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 28/175 (16%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERV------------EMPQNGIYHVGITALSDAFEEN 348
           G N L  E  + +A V KK   L+ V            E+PQ       ++AL +A  E+
Sbjct: 39  GGNSLGIEACEAIANVLKKKTNLKVVDLADIFTGRLISEIPQ------ALSALCNALSEH 92

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN---- 404
            +L  L+L+DN    + A  L   L       I  L +  L   G S IAK L DN    
Sbjct: 93  TSLVELDLSDNAFGGRCADALVPFLQSNTHFQIFKLNNNGLGPWGGSVIAKALLDNAAKC 152

Query: 405 ------TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
                 ++L  +    N +      D  +A      LK++ + +N    EG++ +
Sbjct: 153 EKEGKESSLRVIVCGRNRLENGSAPDWAEAFGKHRNLKEVKMPQNGIRMEGIQAL 207


>gi|405120175|gb|AFR94946.1| ran GTPase activator [Cryptococcus neoformans var. grubii H99]
          Length = 406

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/250 (40%), Positives = 140/250 (56%), Gaps = 7/250 (2%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVELDLSDNAFG    + L   L+S+  F +   KLNNNGLG  G  +++KAL +     
Sbjct: 95  LVELDLSDNAFGGRCADALVPFLQSNTHFQI--FKLNNNGLGPWGGSVVAKALLNNGAKC 152

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           +KEG   +L+V + GRNRLE+  A   AA F K + L+ V+MPQNGI   GI AL++   
Sbjct: 153 EKEGKESSLRVIVCGRNRLEDGSAPDWAAAFGKHRNLKEVKMPQNGIRMEGIQALAEGLS 212

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DN 404
             K L HL+L DNT T  G   + + L   P+L  LNL DCLL SAG  ++   L+   N
Sbjct: 213 NCKELEHLDLQDNTATKTGTRAIVKHLDSWPNLKHLNLSDCLLGSAGGIALTTSLSLGSN 272

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGE--EGVEEMEKLMKSFG 461
             LE + L   E+  +    L  A+    K L  + ++ N+F E  E VEE++K ++ +G
Sbjct: 273 PKLESLKLQYGEMDKRAVELLSVAISQHLKELTVLELNGNRFSEDDECVEELKKALELWG 332

Query: 462 MAAALVLEDD 471
              AL   DD
Sbjct: 333 HEEALDELDD 342



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            AA F K + L+ V+MPQNGI   GI AL++     K+L HL+L DNT T  G   + + 
Sbjct: 179 WAAAFGKHRNLKEVKMPQNGIRMEGIQALAEGLSNCKELEHLDLQDNTATKTGTRAIVKH 238

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P+L  LNL DCLL SAG  ++   L+   N  LE + L   E+  +    L  A+ 
Sbjct: 239 LDSWPNLKHLNLSDCLLGSAGGIALTTSLSLGSNPKLESLKLQYGEMDKRAVELLSVAIS 298

Query: 120 NKTK-LKQINVSENQFGE--EGVEEMEKLMKSFGMAAALVLEDD 160
              K L  + ++ N+F E  E VEE++K ++ +G   AL   DD
Sbjct: 299 QHLKELTVLELNGNRFSEDDECVEELKKALELWGHEEALDELDD 342


>gi|339242785|ref|XP_003377318.1| putative leucine Rich repeat-containing domain protein [Trichinella
           spiralis]
 gi|316973893|gb|EFV57437.1| putative leucine Rich repeat-containing domain protein [Trichinella
           spiralis]
          Length = 436

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/281 (33%), Positives = 140/281 (49%), Gaps = 49/281 (17%)

Query: 198 NASNQSHNNSNQSHNT--SNQSHMS---LKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
           N+S +S  N N +       Q H+    +++GA++  LDLSD+AFG IG + L     S 
Sbjct: 109 NSSIKSKQNFNYTFCAVFGCQKHIFDAIVESGAKIEMLDLSDSAFGKIGADELVRFFSSP 168

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
             ++L  L L+NNGLGI G ++++ AL   + +SK       LK  + GRNRLEN GA  
Sbjct: 169 SAWSLHTLLLHNNGLGIGGGQVIANALKTAHYNSKMANVKFNLKTVVIGRNRLENAGAMA 228

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           LA  F+ + TLE + MPQNGI   GIT L  AF +N +L+ ++L+DNT +   A  L   
Sbjct: 229 LADAFQTIGTLEEIVMPQNGITGPGITELLKAFSKNPSLKKIDLSDNTFSKDAAFSLKDM 288

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L +L  L  +N  DCLL++  A  +A+                                 
Sbjct: 289 LKQLKQLEFVNFDDCLLRNHCAEHLAQ--------------------------------- 315

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL--VLEDD 471
                    +NQFGE+GV+ ++ +    G+A  L  + EDD
Sbjct: 316 ---------DNQFGEKGVKVIKNIASDLGLADFLGSLSEDD 347



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 43/162 (26%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE + MPQNGI   GIT L  AF +N  L+ ++L+DNT +   A  L   
Sbjct: 229 LADAFQTIGTLEEIVMPQNGITGPGITELLKAFSKNPSLKKIDLSDNTFSKDAAFSLKDM 288

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +L  L  +N  DCLL++  A  +A+                                 
Sbjct: 289 LKQLKQLEFVNFDDCLLRNHCAEHLAQ--------------------------------- 315

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEG 162
                    +NQFGE+GV+ ++ +    G+A  L  L +D+G
Sbjct: 316 ---------DNQFGEKGVKVIKNIASDLGLADFLGSLSEDDG 348



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 43/75 (57%)

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           +G   L++AGA ++A       TLE++ +  N I+  G  +L+KA      LK+I++S+N
Sbjct: 216 IGRNRLENAGAMALADAFQTIGTLEEIVMPQNGITGPGITELLKAFSKNPSLKKIDLSDN 275

Query: 133 QFGEEGVEEMEKLMK 147
            F ++    ++ ++K
Sbjct: 276 TFSKDAAFSLKDMLK 290


>gi|384486283|gb|EIE78463.1| hypothetical protein RO3G_03167 [Rhizopus delemar RA 99-880]
          Length = 362

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/222 (43%), Positives = 130/222 (58%), Gaps = 3/222 (1%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L+ELDLSDNAFGP G   L D L ++    L+ L+LNNNGLGI G  +++KAL    + +
Sbjct: 65  LLELDLSDNAFGPAGARPLIDFLTNTKT--LQTLRLNNNGLGIGGGTMVAKALQANADQA 122

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           K E    +L+  I GRNRLE+  +K LA  F    TL+ V MPQNGI   GI  + +  +
Sbjct: 123 KAENRISSLRTIICGRNRLEDGSSKALAQAFASHGTLQVVRMPQNGIRPDGIRTIIEGLK 182

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
           E KNL+HL+L DNT T KG+  L  AL   P L ILN+ DCLL   G++S+   L  N  
Sbjct: 183 ECKNLQHLDLQDNTFTAKGSKALADALGDWPELEILNVSDCLLSKKGSASVFGALHQNKK 242

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGE 447
           L ++    NEI       L  A+K   K L+++ ++ N+F E
Sbjct: 243 LRELMAQYNEIQADAVDILAGAIKGHLKLLEKVELNGNRFDE 284



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 1/136 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F    TL+ V MPQNGI   GI  + +  +E K L+HL+L DNT T KG+  L  A
Sbjct: 149 LAQAFASHGTLQVVRMPQNGIRPDGIRTIIEGLKECKNLQHLDLQDNTFTAKGSKALADA 208

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   P L ILN+ DCLL   G++S+   L  N  L ++    NEI       L  A+K  
Sbjct: 209 LGDWPELEILNVSDCLLSKKGSASVFGALHQNKKLRELMAQYNEIQADAVDILAGAIKGH 268

Query: 122 TK-LKQINVSENQFGE 136
            K L+++ ++ N+F E
Sbjct: 269 LKLLEKVELNGNRFDE 284


>gi|269994416|dbj|BAI50372.1| Ran GTPase activating protein 1 [Leiolepis reevesii rubritaeniata]
          Length = 341

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 108/155 (69%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+ + TLE V MPQNGI H GITAL++AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 1   LAEAFRVIGTLEEVHMPQNGITHPGITALAEAFAVNPLLRVINLNDNTFTEKGAVAMAET 60

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KL  + ++N GDCL++S GA +IA+ +++    L+++NL+  EI     L + +A +N
Sbjct: 61  LKKLRQVEVINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKRDAALIIAEATEN 120

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K++L++++++ N FGEEG E+++++++ F MA  L
Sbjct: 121 KSELEKLDLNGNSFGEEGCEQLQEILEGFNMAEVL 155



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 108/155 (69%), Gaps = 1/155 (0%)

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           LA  F+ + TLE V MPQNGI H GITAL++AF  N  LR +NLNDNT T KGA+ + + 
Sbjct: 1   LAEAFRVIGTLEEVHMPQNGITHPGITALAEAFAVNPLLRVINLNDNTFTEKGAVAMAET 60

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 431
           L KL  + ++N GDCL++S GA +IA+ +++    L+++NL+  EI     L + +A +N
Sbjct: 61  LKKLRQVEVINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKRDAALIIAEATEN 120

Query: 432 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
           K++L++++++ N FGEEG E+++++++ F MA  L
Sbjct: 121 KSELEKLDLNGNSFGEEGCEQLQEILEGFNMAEVL 155


>gi|392580439|gb|EIW73566.1| hypothetical protein TREMEDRAFT_26727 [Tremella mesenterica DSM
           1558]
          Length = 416

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/252 (39%), Positives = 134/252 (53%), Gaps = 7/252 (2%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL +   LVE++LSDNAFG    + +   L S+  F +   KLNNNGLG  G  ++S AL
Sbjct: 99  SLISHTSLVEINLSDNAFGGRCADSMVPFLSSNTHFQI--FKLNNNGLGPQGGIIISSAL 156

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
               E  K EG P  LKV I GRNRLEN  A   A  F     L+ + MPQNGI   GI 
Sbjct: 157 LKNAEKCKSEGKPSNLKVIICGRNRLENGSASSWAKAFSAHGNLKEIRMPQNGIRMEGIK 216

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           +LS+  E N  L  L+L DNTIT  G   L + L K   L  LNL DCLL  +G  ++A 
Sbjct: 217 SLSEGLENNTKLEILDLQDNTITKIGMRSLIKVLPKWKELKELNLSDCLLGPSGGIALAS 276

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQF--GEEGVEEME 454
            L   +N  LE + L   E+  +    L +A+ ++  KLK++ ++ N F   ++ VE + 
Sbjct: 277 LLAKGNNDKLEILKLQYGELDKRFVEILTEAIAQHLKKLKELELNGNWFEADDDCVEGLR 336

Query: 455 KLMKSFGMAAAL 466
           K +   G   AL
Sbjct: 337 KALALNGFEDAL 348



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 5/159 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A  F     L+ + MPQNGI   GI +LS+  E N KL  L+L DNTIT  G   L + 
Sbjct: 190 WAKAFSAHGNLKEIRMPQNGIRMEGIKSLSEGLENNTKLEILDLQDNTITKIGMRSLIKV 249

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM- 118
           L K   L  LNL DCLL  +G  ++A  L   +N  LE + L   E+  +    L +A+ 
Sbjct: 250 LPKWKELKELNLSDCLLGPSGGIALASLLAKGNNDKLEILKLQYGELDKRFVEILTEAIA 309

Query: 119 KNKTKLKQINVSENQF--GEEGVEEMEKLMKSFGMAAAL 155
           ++  KLK++ ++ N F   ++ VE + K +   G   AL
Sbjct: 310 QHLKKLKELELNGNWFEADDDCVEGLRKALALNGFEDAL 348



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 20/217 (9%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +EE+ L  N LG+  C+ L++         KK    + L     G  RL  E  + L+A+
Sbjct: 44  VEEVHLGGNSLGVGACEALAEVF-----KQKKGLKIVNLADIFTG--RLITEIPQSLSAL 96

Query: 317 FKKL---KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
              L    +L  + +  N        ++      N + +   LN+N +  +G I +  AL
Sbjct: 97  CSSLISHTSLVEINLSDNAFGGRCADSMVPFLSSNTHFQIFKLNNNGLGPQGGIIISSAL 156

Query: 374 SK---------LPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
            K          PS L ++  G   L++  ASS AK  + +  L+++ +  N I ++G  
Sbjct: 157 LKNAEKCKSEGKPSNLKVIICGRNRLENGSASSWAKAFSAHGNLKEIRMPQNGIRMEGIK 216

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
            L + ++N TKL+ +++ +N   + G+  + K++  +
Sbjct: 217 SLSEGLENNTKLEILDLQDNTITKIGMRSLIKVLPKW 253



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 9/126 (7%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL-- 65
           ++K +E V +  N +      AL++ F++ K L+ +NL D   T +    + Q+LS L  
Sbjct: 40  EMKDVEEVHLGGNSLGVGACEALAEVFKQKKGLKIVNLAD-IFTGRLITEIPQSLSALCS 98

Query: 66  -----PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA-MK 119
                 SL  +NL D       A S+  +L+ NT  +   L  N +  QGG+ +  A +K
Sbjct: 99  SLISHTSLVEINLSDNAFGGRCADSMVPFLSSNTHFQIFKLNNNGLGPQGGIIISSALLK 158

Query: 120 NKTKLK 125
           N  K K
Sbjct: 159 NAEKCK 164



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 10/123 (8%)

Query: 37  NKKLRHLNLNDNTITYKGAIPLGQALSK---------LPS-LAILNLGDCLLKSAGASSI 86
           N   +   LN+N +  +G I +  AL K          PS L ++  G   L++  ASS 
Sbjct: 131 NTHFQIFKLNNNGLGPQGGIIISSALLKNAEKCKSEGKPSNLKVIICGRNRLENGSASSW 190

Query: 87  AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
           AK  + +  L+++ +  N I ++G   L + ++N TKL+ +++ +N   + G+  + K++
Sbjct: 191 AKAFSAHGNLKEIRMPQNGIRMEGIKSLSEGLENNTKLEILDLQDNTITKIGMRSLIKVL 250

Query: 147 KSF 149
             +
Sbjct: 251 PKW 253


>gi|342320572|gb|EGU12512.1| Ran GTPase activator, putative [Rhodotorula glutinis ATCC 204091]
          Length = 407

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 130/246 (52%), Gaps = 20/246 (8%)

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
           SDNAFG    E + D + S+   +LE L+LNNNG+G  G  +++ AL +  + ++KEG  
Sbjct: 100 SDNAFGGRSAEPMLDFISSAP--SLEILRLNNNGMGPQGGAMIAGALLENAKKAEKEGRK 157

Query: 293 LALKVFI-------------AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
             L+V +              GRNRLEN  A   AA F  L TL  V MPQNGI   GI 
Sbjct: 158 SKLRVLVCEDEWLMQLEDGSTGRNRLENGSAPDFAAAFSALTTLAEVRMPQNGIRMEGIE 217

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+    ++N NL+ L+L DNT T KG+  + ++L   P L ILNL DCLL+  G  SI  
Sbjct: 218 AIVKGLQKNPNLQWLDLQDNTATEKGSRAIAESLPFWPKLRILNLSDCLLRPRGGLSIFT 277

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGV-EEMEK 455
            L    N  L  + L  NE+  +    L  A+  +   L  + ++ N +G +G  EE EK
Sbjct: 278 TLLSGSNPLLTSLKLQSNELDTRAITQLAAAIALHGEHLTDLELNGN-YGVDGTEEEYEK 336

Query: 456 LMKSFG 461
           + ++ G
Sbjct: 337 VREALG 342



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            AA F  L TL  V MPQNGI   GI A+    ++N  L+ L+L DNT T KG+  + ++
Sbjct: 191 FAAAFSALTTLAEVRMPQNGIRMEGIEAIVKGLQKNPNLQWLDLQDNTATEKGSRAIAES 250

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L   P L ILNL DCLL+  G  SI   L    N  L  + L  NE+  +    L  A+ 
Sbjct: 251 LPFWPKLRILNLSDCLLRPRGGLSIFTTLLSGSNPLLTSLKLQSNELDTRAITQLAAAIA 310

Query: 120 -NKTKLKQINVSENQFGEEGV-EEMEKLMKSFG 150
            +   L  + ++ N +G +G  EE EK+ ++ G
Sbjct: 311 LHGEHLTDLELNGN-YGVDGTEEEYEKVREALG 342


>gi|409042121|gb|EKM51605.1| hypothetical protein PHACADRAFT_150139 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 395

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 133/260 (51%), Gaps = 16/260 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    LVE++LSDNAFG   V  +  LL ++  F +  LKLNNNGLG  G  +++ AL
Sbjct: 90  ALKDKTSLVEINLSDNAFGGRSVNPMVPLLTTNRSFQI--LKLNNNGLGPAGGAVIADAL 147

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 SKKEG+P  L+  I GRNRLE+  A   A  F+    L  + MPQNGI   GI+
Sbjct: 148 LQSALLSKKEGTPSNLRTVICGRNRLEDGSASAWAKAFEAHGGLTEIRMPQNGIRMDGIS 207

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC-LLKSAGASSIA 398
           AL       K L  L+L DNT    G+  +   L + PSL  LNL DC L K    S I 
Sbjct: 208 ALVQGISACKGLELLDLEDNTFGRLGSKTMAGVLKRWPSLHTLNLSDCHLTKEGDISPIV 267

Query: 399 KYLTD--NTTLEDVNLTCNEISVQ------GGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           + L D  N  L  + L  N    Q      GG++    M    +L+  ++ E    +EG+
Sbjct: 268 EILADGSNPNLHTLRLQNNNFETQTYQLLSGGIESGLGMLKLLELQWNDIEEE---DEGL 324

Query: 451 EEMEKLMKSFGMAAALVLED 470
           E + +++K  G    LV++D
Sbjct: 325 EILSRVLK--GRGGKLVVDD 342



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 77/167 (46%), Gaps = 14/167 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A  F+    L  + MPQNGI   GI+AL       K L  L+L DNT    G+  +   
Sbjct: 181 WAKAFEAHGGLTEIRMPQNGIRMDGISALVQGISACKGLELLDLEDNTFGRLGSKTMAGV 240

Query: 62  LSKLPSLAILNLGDC-LLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQ------GGL 112
           L + PSL  LNL DC L K    S I + L D  N  L  + L  N    Q      GG+
Sbjct: 241 LKRWPSLHTLNLSDCHLTKEGDISPIVEILADGSNPNLHTLRLQNNNFETQTYQLLSGGI 300

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           +    M    +L+  ++ E    +EG+E + +++K  G    LV++D
Sbjct: 301 ESGLGMLKLLELQWNDIEEE---DEGLEILSRVLK--GRGGKLVVDD 342



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 56/220 (25%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLER------------VEMPQNGIYHVGITALSDAFEEN 348
           G N +  E A+ LA   +K K L+              E+PQ       ++A+ DA ++ 
Sbjct: 41  GGNTIGVEAAQALAEFLEKTKVLKVADFADIFTGRLITEIPQ------ALSAICDALKDK 94

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL-------------GDCLLKSA--- 392
            +L  +NL+DN    +   P+   L+   S  IL L              D LL+SA   
Sbjct: 95  TSLVEINLSDNAFGGRSVNPMVPLLTTNRSFQILKLNNNGLGPAGGAVIADALLQSALLS 154

Query: 393 ----------------------GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
                                  AS+ AK    +  L ++ +  N I + G   LV+ + 
Sbjct: 155 KKEGTPSNLRTVICGRNRLEDGSASAWAKAFEAHGGLTEIRMPQNGIRMDGISALVQGIS 214

Query: 431 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
               L+ +++ +N FG  G + M  ++K +     L L D
Sbjct: 215 ACKGLELLDLEDNTFGRLGSKTMAGVLKRWPSLHTLNLSD 254


>gi|343425313|emb|CBQ68849.1| probable ran GTPase activating protein 1 [Sporisorium reilianum
           SRZ2]
          Length = 393

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 140/251 (55%), Gaps = 8/251 (3%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVEL+LSDNAFG    E + + L+++  F++  LKLNNNGLGITG  ++++AL++  ++ 
Sbjct: 98  LVELNLSDNAFGGRSAEPMVNFLKNNHSFSV--LKLNNNGLGITGGTIVAEALYEAAQNL 155

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           K +G    L+  I GRNRLEN  A + A  +     L  V M QNGI   GI A+S    
Sbjct: 156 KTKGLESKLRTVICGRNRLENGSAPVWAKAYAAHGGLVEVRMFQNGIRMEGIEAISKGLA 215

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--N 404
              NL  L+L DNT T +G+  +   L K P L  LNL DCLLK  G + +   L +  N
Sbjct: 216 SCANLEVLDLQDNTATLRGSRAIAACLPKWPKLTTLNLSDCLLKPKGGALVFGALANGSN 275

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGE--EGVEEMEKLMKSFG 461
             LE + +   ++  +    L  A++ + TKL +++++ N   E  E +E+++  +   G
Sbjct: 276 PALETIQVQYCDLDRKVLDQLGSAIELHLTKLTKLDINGNWADEDDECIEKIKSALAKHG 335

Query: 462 MAAALVLEDDE 472
              AL LE DE
Sbjct: 336 HEDAL-LELDE 345



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 6/155 (3%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  V M QNGI   GI A+S        L  L+L DNT T +G+  +   L K P L  L
Sbjct: 192 LVEVRMFQNGIRMEGIEAISKGLASCANLEVLDLQDNTATLRGSRAIAACLPKWPKLTTL 251

Query: 72  NLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQIN 128
           NL DCLLK  G + +   L +  N  LE + +   ++  +    L  A++ + TKL +++
Sbjct: 252 NLSDCLLKPKGGALVFGALANGSNPALETIQVQYCDLDRKVLDQLGSAIELHLTKLTKLD 311

Query: 129 VSENQFGE--EGVEEMEKLMKSFGMAAALVLEDDE 161
           ++ N   E  E +E+++  +   G   AL LE DE
Sbjct: 312 INGNWADEDDECIEKIKSALAKHGHEDAL-LELDE 345


>gi|406694621|gb|EKC97945.1| Ran GTPase activator [Trichosporon asahii var. asahii CBS 8904]
          Length = 1114

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 133/250 (53%), Gaps = 7/250 (2%)

Query: 227  LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
            LVELDLSDNAFG    + +   L+++  + +  +KLNN GLG  G K+++ A+ +     
Sbjct: 799  LVELDLSDNAFGGRCADAMTSFLKNNDVYQV--IKLNNTGLGPEGGKVIAGAILELANRL 856

Query: 287  KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            K+EG    L+  + GR+RLEN  A + A  F     L+ + MPQNGI   GI AL+    
Sbjct: 857  KEEGKTSQLRTVVCGRSRLENGSASVWADAFAAHGGLKEIRMPQNGIRMEGIEALAKGLA 916

Query: 347  ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--N 404
             NK+L HL+L DNT T  G   L + L   P+L  LNL DCLL  AG  ++   L +  N
Sbjct: 917  HNKDLEHLDLQDNTATRSGTRALVRVLENWPNLRHLNLSDCLLGKAGGIALGTALANGSN 976

Query: 405  TTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFG--EEGVEEMEKLMKSFG 461
              LE + L   E   +    L  A+ ++ T L ++ ++ NQ    +E +EE+ K +   G
Sbjct: 977  PKLESLKLQYGEFDKRTIELLSTAVAQHLTNLTELELNGNQCDAEDEAIEELRKALALHG 1036

Query: 462  MAAALVLEDD 471
               AL   DD
Sbjct: 1037 NEDALDDLDD 1046



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 86/172 (50%), Gaps = 6/172 (3%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            + A  F     L+ + MPQNGI   GI AL+     NK L HL+L DNT T  G   L +
Sbjct: 882  VWADAFAAHGGLKEIRMPQNGIRMEGIEALAKGLAHNKDLEHLDLQDNTATRSGTRALVR 941

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAM 118
             L   P+L  LNL DCLL  AG  ++   L +  N  LE + L   E   +    L  A+
Sbjct: 942  VLENWPNLRHLNLSDCLLGKAGGIALGTALANGSNPKLESLKLQYGEFDKRTIELLSTAV 1001

Query: 119  -KNKTKLKQINVSENQFG--EEGVEEMEKLMKSFGMAAAL-VLEDDEGECSD 166
             ++ T L ++ ++ NQ    +E +EE+ K +   G   AL  L+D E  CSD
Sbjct: 1002 AQHLTNLTELELNGNQCDAEDEAIEELRKALALHGNEDALDDLDDMEEPCSD 1053


>gi|167516082|ref|XP_001742382.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779006|gb|EDQ92620.1| predicted protein [Monosiga brevicollis MX1]
          Length = 720

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 4/236 (1%)

Query: 214 SNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCK 273
           S  +H+ LK    L  LDLSDNA  P G E L  L+  S C  L+ L LNN G+G +G  
Sbjct: 216 SRFAHVFLKFD-NLTWLDLSDNAVNPQGAENLFPLI--SRCLTLKRLVLNNTGVGPSGGA 272

Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
            + KAL       +++G+P AL+ FI GR+RLE +G+  +   F+ + +L  V +  NGI
Sbjct: 273 TVGKALQAACRLGQEKGTPYALEAFILGRSRLELDGSIEIGKAFEMMGSLREVRVNNNGI 332

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
           Y  GI AL+     N+NL  L L+DN I  +G I LG    + P+L  + L    L+ AG
Sbjct: 333 YEEGIVALARGLAHNQNLEILELSDNAIKRRGGIALGHMARRCPNLHTVLLETTCLRDAG 392

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
              I + L     L  ++++ N+++ Q    L+  +K K  ++Q+  + N FGE G
Sbjct: 393 VIPILEGLNGAKQLSHLDISYNDLTKQSLNVLLSILKGK-PVRQLEANGNLFGESG 447



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 1/133 (0%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           F+ + +L  V +  NGIY  GI AL+     N+ L  L L+DN I  +G I LG    + 
Sbjct: 316 FEMMGSLREVRVNNNGIYEEGIVALARGLAHNQNLEILELSDNAIKRRGGIALGHMARRC 375

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
           P+L  + L    L+ AG   I + L     L  ++++ N+++ Q    L+  +K K  ++
Sbjct: 376 PNLHTVLLETTCLRDAGVIPILEGLNGAKQLSHLDISYNDLTKQSLNVLLSILKGK-PVR 434

Query: 126 QINVSENQFGEEG 138
           Q+  + N FGE G
Sbjct: 435 QLEANGNLFGESG 447



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 13/141 (9%)

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
           R ++P+    H  ++  +  F +  NL  L+L+DN +  +GA  L   +S+  +L  L L
Sbjct: 205 RRKIPE---IHPALSRFAHVFLKFDNLTWLDLSDNAVNPQGAENLFPLISRCLTLKRLVL 261

Query: 385 GDCLLKSAGASSIAKYLT----------DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 434
            +  +  +G +++ K L               LE   L  + + + G +++ KA +    
Sbjct: 262 NNTGVGPSGGATVGKALQAACRLGQEKGTPYALEAFILGRSRLELDGSIEIGKAFEMMGS 321

Query: 435 LKQINVSENQFGEEGVEEMEK 455
           L+++ V+ N   EEG+  + +
Sbjct: 322 LREVRVNNNGIYEEGIVALAR 342


>gi|409078881|gb|EKM79243.1| hypothetical protein AGABI1DRAFT_74106 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 386

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 6/176 (3%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    LVE+DLSDNAFG   VE +   L  +  F +  LKL NNGLG  G ++++ AL
Sbjct: 85  ALKDKTSLVEIDLSDNAFGGRSVEPMVPFLTHNHSFQI--LKLTNNGLGPAGGRVIADAL 142

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +    S+K G+   L+V I GRNRLE+  A+  A  F +  TLE V MPQNGI   G+ 
Sbjct: 143 RENALISRKAGNKSNLRVVICGRNRLEDGSAQAWADAFAEHGTLEDVRMPQNGIRMDGMI 202

Query: 340 ALSDAFEENKNLRHLNLNDNTIT----YKGAIPLGQALSKLPSLAILNLGDCLLKS 391
           AL+   ++N  LRH++  DNT T      G     +A++  P L +LNL DC+L +
Sbjct: 203 ALAAGLKKNPGLRHIDFQDNTFTDDRKDTGVQAWAKAMASWPELGVLNLSDCVLSA 258



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTIT----YKGAIP 57
            A  F +  TLE V MPQNGI   G+ AL+   ++N  LRH++  DNT T      G   
Sbjct: 176 WADAFAEHGTLEDVRMPQNGIRMDGMIALAAGLKKNPGLRHIDFQDNTFTDDRKDTGVQA 235

Query: 58  LGQALSKLPSLAILNLGDCLLKS 80
             +A++  P L +LNL DC+L +
Sbjct: 236 WAKAMASWPELGVLNLSDCVLSA 258



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 42/176 (23%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            +TA+ +A ++   L  ++L+DN    +   P+   L+   S  IL L +  L  AG   
Sbjct: 78  ALTAICNALKDKTSLVEIDLSDNAFGGRSVEPMVPFLTHNHSFQILKLTNNGLGPAGGRV 137

Query: 86  IAKYLTDNT--------------------------------------TLEDVNLTCNEIS 107
           IA  L +N                                       TLEDV +  N I 
Sbjct: 138 IADALRENALISRKAGNKSNLRVVICGRNRLEDGSAQAWADAFAEHGTLEDVRMPQNGIR 197

Query: 108 VQGGLDLVKAMKNKTKLKQINVSENQFGEE----GVEEMEKLMKSFGMAAALVLED 159
           + G + L   +K    L+ I+  +N F ++    GV+   K M S+     L L D
Sbjct: 198 MDGMIALAAGLKKNPGLRHIDFQDNTFTDDRKDTGVQAWAKAMASWPELGVLNLSD 253


>gi|426195789|gb|EKV45718.1| hypothetical protein AGABI2DRAFT_223923 [Agaricus bisporus var.
           bisporus H97]
          Length = 386

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 6/176 (3%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    LVE+DLSDNAFG   VE +   L  +  F +  LKL NNGLG  G ++++ AL
Sbjct: 85  ALKDKTSLVEIDLSDNAFGGRSVEPMVPFLTHNHSFQI--LKLTNNGLGPAGGRVIADAL 142

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +    S+K G+   L+V I GRNRLE+  A+  A  F +  TLE V MPQNGI   G+ 
Sbjct: 143 RENALISRKAGNKSNLRVVICGRNRLEDGSAQAWADAFAEHGTLEDVRMPQNGIRMDGMI 202

Query: 340 ALSDAFEENKNLRHLNLNDNTIT----YKGAIPLGQALSKLPSLAILNLGDCLLKS 391
           AL+   ++N  LRH++  DNT T      G     +A++  P L +LNL DC+L +
Sbjct: 203 ALAAGLKKNPGLRHIDFQDNTFTDDRKDTGVQAWAKAMASWPELGVLNLSDCVLSA 258



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTIT----YKGAIP 57
            A  F +  TLE V MPQNGI   G+ AL+   ++N  LRH++  DNT T      G   
Sbjct: 176 WADAFAEHGTLEDVRMPQNGIRMDGMIALAAGLKKNPGLRHIDFQDNTFTDDRKDTGVQA 235

Query: 58  LGQALSKLPSLAILNLGDCLLKS 80
             +A++  P L +LNL DC+L +
Sbjct: 236 WAKAMASWPELGVLNLSDCVLSA 258



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 42/176 (23%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            +TA+ +A ++   L  ++L+DN    +   P+   L+   S  IL L +  L  AG   
Sbjct: 78  ALTAICNALKDKTSLVEIDLSDNAFGGRSVEPMVPFLTHNHSFQILKLTNNGLGPAGGRV 137

Query: 86  IAKYLTDNT--------------------------------------TLEDVNLTCNEIS 107
           IA  L +N                                       TLEDV +  N I 
Sbjct: 138 IADALRENALISRKAGNKSNLRVVICGRNRLEDGSAQAWADAFAEHGTLEDVRMPQNGIR 197

Query: 108 VQGGLDLVKAMKNKTKLKQINVSENQFGEE----GVEEMEKLMKSFGMAAALVLED 159
           + G + L   +K    L+ I+  +N F ++    GV+   K M S+     L L D
Sbjct: 198 MDGMIALAAGLKKNPGLRHIDFQDNTFTDDRKDTGVQAWAKAMASWPELGVLNLSD 253


>gi|401885055|gb|EJT49186.1| Ran GTPase activator [Trichosporon asahii var. asahii CBS 2479]
          Length = 1170

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 133/250 (53%), Gaps = 7/250 (2%)

Query: 227  LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
            LVELDLSDNAFG    + +   L+++  + +  +KLNN GLG  G K+++ A+ +     
Sbjct: 858  LVELDLSDNAFGGRCADAMTSFLKNNDVYQV--IKLNNTGLGPEGGKVIAGAILELANRL 915

Query: 287  KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            K+EG    L+  + GR+RLEN  A + A  F     L+ + MPQNGI   GI AL+    
Sbjct: 916  KEEGKTSQLRTVVCGRSRLENGSASVWADAFAAHGGLKEIRMPQNGIRMEGIEALAKGLA 975

Query: 347  ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--N 404
             NK+L HL+L DNT T  G   L + L   P+L  LNL DCLL  AG  ++   L +  N
Sbjct: 976  HNKDLEHLDLQDNTATRSGTRALVRVLENWPNLRHLNLSDCLLGKAGGIALGTALANGSN 1035

Query: 405  TTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFG--EEGVEEMEKLMKSFG 461
              LE + L   E   +    L  A+ ++ T L ++ ++ NQ    +E +EE+ K +   G
Sbjct: 1036 PKLESLKLQYGEFDKRTIELLSTAVAQHLTNLTELELNGNQCDAEDEAIEELRKALALHG 1095

Query: 462  MAAALVLEDD 471
               AL   DD
Sbjct: 1096 NEDALDDLDD 1105



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 86/172 (50%), Gaps = 6/172 (3%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            + A  F     L+ + MPQNGI   GI AL+     NK L HL+L DNT T  G   L +
Sbjct: 941  VWADAFAAHGGLKEIRMPQNGIRMEGIEALAKGLAHNKDLEHLDLQDNTATRSGTRALVR 1000

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAM 118
             L   P+L  LNL DCLL  AG  ++   L +  N  LE + L   E   +    L  A+
Sbjct: 1001 VLENWPNLRHLNLSDCLLGKAGGIALGTALANGSNPKLESLKLQYGEFDKRTIELLSTAV 1060

Query: 119  -KNKTKLKQINVSENQFG--EEGVEEMEKLMKSFGMAAAL-VLEDDEGECSD 166
             ++ T L ++ ++ NQ    +E +EE+ K +   G   AL  L+D E  CSD
Sbjct: 1061 AQHLTNLTELELNGNQCDAEDEAIEELRKALALHGNEDALDDLDDMEEPCSD 1112


>gi|71020425|ref|XP_760443.1| hypothetical protein UM04296.1 [Ustilago maydis 521]
 gi|46100112|gb|EAK85345.1| hypothetical protein UM04296.1 [Ustilago maydis 521]
          Length = 517

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 135/252 (53%), Gaps = 10/252 (3%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVEL+LSDNAFG    E + + L+++  F++  LKLNNNGLGITG  ++++AL +  ++ 
Sbjct: 98  LVELNLSDNAFGGRSAEPMVNFLKNNHSFSV--LKLNNNGLGITGGTIVAEALFEAAQNL 155

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           K +G    L+  I GRNRLEN  A + A  +     L  V M QNGI   GI A+S    
Sbjct: 156 KTKGLQSKLRTVICGRNRLENGSAPVWAKAYAAHGGLTEVRMFQNGIRMEGIEAISKGLA 215

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DN 404
              NL  L+L DNT T +G+  +   L K P L  LNL DCLLK  G   +   L    N
Sbjct: 216 SCPNLEVLDLQDNTATLRGSRAIAACLPKWPKLKTLNLSDCLLKPKGGRLVFGALAAGSN 275

Query: 405 TTLEDVNLT-CN---EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
             LE + +  C+   ++  Q G  +   + N TKL  IN +     +E +E+++  +   
Sbjct: 276 PALETIQVQYCDLDRQVLDQLGSAIELHLSNLTKL-DINGNWADEEDECIEKIKSALAKH 334

Query: 461 GMAAALVLEDDE 472
           G   AL LE DE
Sbjct: 335 GHEDAL-LELDE 345



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 8/156 (5%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  V M QNGI   GI A+S        L  L+L DNT T +G+  +   L K P L  L
Sbjct: 192 LTEVRMFQNGIRMEGIEAISKGLASCPNLEVLDLQDNTATLRGSRAIAACLPKWPKLKTL 251

Query: 72  NLGDCLLKSAGASSIAKYLT--DNTTLEDVNLT-CN---EISVQGGLDLVKAMKNKTKLK 125
           NL DCLLK  G   +   L    N  LE + +  C+   ++  Q G  +   + N TKL 
Sbjct: 252 NLSDCLLKPKGGRLVFGALAAGSNPALETIQVQYCDLDRQVLDQLGSAIELHLSNLTKL- 310

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
            IN +     +E +E+++  +   G   AL LE DE
Sbjct: 311 DINGNWADEEDECIEKIKSALAKHGHEDAL-LELDE 345


>gi|443898332|dbj|GAC75667.1| ran GTPase-activating protein [Pseudozyma antarctica T-34]
          Length = 399

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 108/188 (57%), Gaps = 4/188 (2%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVEL+LSDNAFG    E + + L+++  F++  LKLNNNGLGITG  ++++AL++  ++ 
Sbjct: 98  LVELNLSDNAFGGRSAEPMVNFLKNNHSFSV--LKLNNNGLGITGGTIVAEALYEAAQNL 155

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           K +G    L+  I GRNRLEN  A + A  +     L  V M QNGI   GI A+S    
Sbjct: 156 KAKGLESKLRTVICGRNRLENGSAPVWAKAYAAHGGLVEVRMFQNGIRMEGIEAISKGLA 215

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--N 404
              NL  L+L DNT T +G+  +   L K P L  LNL DCLLK  G + +   L +  N
Sbjct: 216 SCPNLEVLDLQDNTATLRGSRAIAACLPKWPKLKTLNLSDCLLKPKGGALVFGALANGSN 275

Query: 405 TTLEDVNL 412
             LE + +
Sbjct: 276 PALETIQV 283



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  V M QNGI   GI A+S        L  L+L DNT T +G+  +   L K P L  L
Sbjct: 192 LVEVRMFQNGIRMEGIEAISKGLASCPNLEVLDLQDNTATLRGSRAIAACLPKWPKLKTL 251

Query: 72  NLGDCLLKSAGASSIAKYLTD--NTTLEDVNL 101
           NL DCLLK  G + +   L +  N  LE + +
Sbjct: 252 NLSDCLLKPKGGALVFGALANGSNPALETIQV 283


>gi|148672613|gb|EDL04560.1| RAN GTPase activating protein 1, isoform CRA_a [Mus musculus]
          Length = 247

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 73/97 (75%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
           +C+  S  +G PLALKVF+AGRNRLEN+GA  LA  F
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAF 204


>gi|149065836|gb|EDM15709.1| rCG59652, isoform CRA_c [Rattus norvegicus]
          Length = 232

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/102 (59%), Positives = 73/102 (71%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV G   LL+S  CF L+ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
           +C+  S  +G PL LKVF+AGRNRLEN+GA  LA  F    T
Sbjct: 168 ECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFGAFVT 209


>gi|388855629|emb|CCF50852.1| probable ran GTPase activating protein 1 [Ustilago hordei]
          Length = 399

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 4/188 (2%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVE++LSDNAFG    + + + L+++  F++  LKLNNNGLGITG  ++++AL++  ++ 
Sbjct: 98  LVEINLSDNAFGGRSAQPMVNFLKNNHSFSV--LKLNNNGLGITGGTIVAEALYEAAQNL 155

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
             +G    L+  I GRNRLEN  A + A  +   + L  V M QNGI   GI A+S    
Sbjct: 156 NAKGLQSNLRTVICGRNRLENGSAPVWAKAYAAHRGLVEVRMFQNGIRMEGIEAISKGLA 215

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--N 404
              NL  L+L DNT T +G+  +   L K P L  LNL DCLLK  G + +   L +  N
Sbjct: 216 SCPNLEVLDLQDNTATLRGSRAIAACLPKWPKLKTLNLSDCLLKPKGGALVFGALANGSN 275

Query: 405 TTLEDVNL 412
             LE + +
Sbjct: 276 PALETIQV 283



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           + A  +   + L  V M QNGI   GI A+S        L  L+L DNT T +G+  +  
Sbjct: 181 VWAKAYAAHRGLVEVRMFQNGIRMEGIEAISKGLASCPNLEVLDLQDNTATLRGSRAIAA 240

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNL 101
            L K P L  LNL DCLLK  G + +   L +  N  LE + +
Sbjct: 241 CLPKWPKLKTLNLSDCLLKPKGGALVFGALANGSNPALETIQV 283


>gi|390333078|ref|XP_003723637.1| PREDICTED: ran GTPase-activating protein 1-like [Strongylocentrotus
           purpuratus]
          Length = 230

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 1/98 (1%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA LVE+DLSDNAFGP GV+ + +LL SS C+ L E++ NNNGLGI G KL+++AL 
Sbjct: 99  MTAGAHLVEIDLSDNAFGPDGVKAVRELLESSSCYTLREMRFNNNGLGIGG-KLMAEALI 157

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
            C+E S K G PLALKVFIAGRNRLEN GA  LA  FK
Sbjct: 158 TCHEKSSKAGKPLALKVFIAGRNRLENPGATALAKAFK 195


>gi|320581888|gb|EFW96107.1| GTPase activating protein (GAP) [Ogataea parapolymorpha DL-1]
          Length = 391

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 129/234 (55%), Gaps = 7/234 (2%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L+LSDNA G   ++ L + L S+   ++E L L NNGLG      + KAL+   +  +KE
Sbjct: 111 LNLSDNALGQDTIDILEEFLSSAK--SVEHLILTNNGLGPFSGARVGKALYRLAKLKEKE 168

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDAFEEN 348
            +P +LK F  GRNRLEN     LA  FK    L+ + + QNGI   GI  L +      
Sbjct: 169 NAP-SLKTFWCGRNRLENGSVDYLAIGFKANSDLQEIRLYQNGIRPQGIAKLINQGLAHL 227

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTT 406
            NL+ L+L DNT T  G++ L  AL K P L  LN+ DCLLKSAG   + + L D  ++ 
Sbjct: 228 NNLKVLDLQDNTFTVPGSLALASALPKWPELTELNVNDCLLKSAGCLKVIQGLADLKDSK 287

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           LE + L  NE+       L + + + + LK + ++ N+F EE  E +EK+ ++F
Sbjct: 288 LETLKLQYNELESDSLEVLARVVPSLSALKLLELNGNRF-EEDSELIEKITETF 340



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 82/156 (52%), Gaps = 14/156 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLN------LNDNTITYKGA 55
           LA  FK    L+ + + QNGI   GI  L      N+ L HLN      L DNT T  G+
Sbjct: 191 LAIGFKANSDLQEIRLYQNGIRPQGIAKLI-----NQGLAHLNNLKVLDLQDNTFTVPGS 245

Query: 56  IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLD 113
           + L  AL K P L  LN+ DCLLKSAG   + + L D  ++ LE + L  NE+       
Sbjct: 246 LALASALPKWPELTELNVNDCLLKSAGCLKVIQGLADLKDSKLETLKLQYNELESDSLEV 305

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L + + + + LK + ++ N+F EE  E +EK+ ++F
Sbjct: 306 LARVVPSLSALKLLELNGNRF-EEDSELIEKITETF 340


>gi|164658604|ref|XP_001730427.1| hypothetical protein MGL_2223 [Malassezia globosa CBS 7966]
 gi|159104323|gb|EDP43213.1| hypothetical protein MGL_2223 [Malassezia globosa CBS 7966]
          Length = 397

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 109/179 (60%), Gaps = 7/179 (3%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L E++LSDNAFG    E + +LL ++   ++  LKL+NNGLG++G  +++ AL   YES
Sbjct: 101 QLEEVNLSDNAFGGRSAEPMVNLLTNNRHISV--LKLSNNGLGVSGGTIVADAL---YES 155

Query: 286 SK--KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           +K  K+G    L+V + GRNRLEN  A   A  F + + +  V + QNGI   G+ AL +
Sbjct: 156 AKHLKDGEKSQLRVVVCGRNRLENGSAIAWARAFAQHRGITEVSLYQNGIRMEGVRALCE 215

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
              + K+L  LNL DNT T +G+  + +AL   P L  LNL DCLLKS G S + + L+
Sbjct: 216 GLSDCKDLEVLNLQDNTATLRGSRSVAKALPNWPHLRTLNLSDCLLKSKGGSLLFESLS 274



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 50/90 (55%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A  F + + +  V + QNGI   G+ AL +   + K L  LNL DNT T +G+  + +A
Sbjct: 185 WARAFAQHRGITEVSLYQNGIRMEGVRALCEGLSDCKDLEVLNLQDNTATLRGSRSVAKA 244

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT 91
           L   P L  LNL DCLLKS G S + + L+
Sbjct: 245 LPNWPHLRTLNLSDCLLKSKGGSLLFESLS 274


>gi|238596313|ref|XP_002394016.1| hypothetical protein MPER_06164 [Moniliophthora perniciosa FA553]
 gi|215462369|gb|EEB94946.1| hypothetical protein MPER_06164 [Moniliophthora perniciosa FA553]
          Length = 342

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 131/252 (51%), Gaps = 26/252 (10%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVELDLSDNAFG   V+ +   L  +  F +  LKLNNNGLG  G  +L+ AL +    S
Sbjct: 96  LVELDLSDNAFGGRSVDPMVPFLTQNRSFQI--LKLNNNGLGPAGGTVLANALLESARLS 153

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
             EG    L+ FI GRNRLE+  A   A  F     L  + MPQNGI   GITAL+    
Sbjct: 154 AAEGKKSNLRTFICGRNRLEDGSAPAWAEAFAAHGRLVEIRMPQNGIRMDGITALAKGLA 213

Query: 347 ENKNLRHLNLNDNTITYKGAI----PLGQALSKLPSLAILNLGDCLLKSAG-ASSIAKYL 401
           +N +L++++L DNT T++GA+        AL+  P L  LNL DC+L   G A S+ + L
Sbjct: 214 KNADLQYIDLQDNTFTFEGALTGVQAWSDALASWPKLRTLNLSDCVLSGDGEAPSLVETL 273

Query: 402 T--DNTTLEDVNLTCNEI----------SVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
               N  L  + L  N +          S+QG L  + ++    +L+  +V E+   +  
Sbjct: 274 AAGSNPKLHTLQLQNNNLEAETFARINESIQGPLKSLMSL----ELQWTDVEED---DTN 326

Query: 450 VEEMEKLMKSFG 461
           +EE+   MK  G
Sbjct: 327 LEEIGTHMKRRG 338



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 24/156 (15%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAI----PLGQALSKLPS 67
           L  + MPQNGI   GITAL+    +N  L++++L DNT T++GA+        AL+  P 
Sbjct: 190 LVEIRMPQNGIRMDGITALAKGLAKNADLQYIDLQDNTFTFEGALTGVQAWSDALASWPK 249

Query: 68  LAILNLGDCLLKSAG-ASSIAKYLT--DNTTLEDVNLTCNEI----------SVQGGLDL 114
           L  LNL DC+L   G A S+ + L    N  L  + L  N +          S+QG L  
Sbjct: 250 LRTLNLSDCVLSGDGEAPSLVETLAAGSNPKLHTLQLQNNNLEAETFARINESIQGPLKS 309

Query: 115 VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 150
           + ++    +L+  +V E+   +  +EE+   MK  G
Sbjct: 310 LMSL----ELQWTDVEED---DTNLEEIGTHMKRRG 338


>gi|388581078|gb|EIM21388.1| RNI-like protein [Wallemia sebi CBS 633.66]
          Length = 406

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 106/183 (57%), Gaps = 7/183 (3%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL    +L E++LSDNAFG    E + +LL +     L+ LKLNNNGLGI G K++S AL
Sbjct: 97  SLLKCPKLEEVNLSDNAFGGRSAEPMVNLLSNHP--NLQVLKLNNNGLGIEGGKIVSGAL 154

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGI 338
                +S  EGS   L+V + GRNRLEN  +   A  +   K TL+ V+MPQNGI   GI
Sbjct: 155 KSL--ASHPEGS--KLRVVVCGRNRLENGSSDSWAEAYSLHKNTLQVVKMPQNGIRPEGI 210

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
           TA+        +LR L+L DNT+T  G+I L  A+    +L ++N+ DCL    G   IA
Sbjct: 211 TAILGGLTNCNDLRELDLQDNTMTKNGSIALSNAIKSWSNLEVINISDCLTGGRGGIEIA 270

Query: 399 KYL 401
           K L
Sbjct: 271 KSL 273



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 46/80 (57%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ V+MPQNGI   GITA+         LR L+L DNT+T  G+I L  A+    +L +
Sbjct: 194 TLQVVKMPQNGIRPEGITAILGGLTNCNDLRELDLQDNTMTKNGSIALSNAIKSWSNLEV 253

Query: 71  LNLGDCLLKSAGASSIAKYL 90
           +N+ DCL    G   IAK L
Sbjct: 254 INISDCLTGGRGGIEIAKSL 273


>gi|449549129|gb|EMD40095.1| hypothetical protein CERSUDRAFT_45376 [Ceriporiopsis subvermispora
           B]
          Length = 403

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 121/237 (51%), Gaps = 6/237 (2%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVELDLSDNAFG   V+ +   L  +  F  + LKLNNNGLG  G  ++++AL    E S
Sbjct: 93  LVELDLSDNAFGGRSVDPMVPFLTQNRAF--QVLKLNNNGLGPAGGAVIARALLRSAELS 150

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           K+ G P  L+  I GRNRLE+  A   AA F+    L  V MPQNGI   GI AL     
Sbjct: 151 KEAGQPSNLRTVICGRNRLEDGSAPAWAAAFRAHGALREVRMPQNGIRMDGIAALVGGLS 210

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA-SSIAKYLT--D 403
               L HL+L DNT    GA  +  AL   P L  LNL DC+L   GA S + + L    
Sbjct: 211 ACAALEHLDLQDNTFGEAGAAAMAGALGGWPGLRTLNLSDCVLADEGAVSPVVEVLAGGS 270

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           N  LE + L  N +  Q    L + + +   LK + V  N+  E+  E +  L  +F
Sbjct: 271 NPKLETLQLQNNNLETQSWAILAQGIASLPILKTLEVQWNEV-EDDDESISALQSAF 326



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  V MPQNGI   GI AL         L HL+L DNT    GA  +  AL   P L  L
Sbjct: 187 LREVRMPQNGIRMDGIAALVGGLSACAALEHLDLQDNTFGEAGAAAMAGALGGWPGLRTL 246

Query: 72  NLGDCLLKSAGA-SSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
           NL DC+L   GA S + + L    N  LE + L  N +  Q    L + + +   LK + 
Sbjct: 247 NLSDCVLADEGAVSPVVEVLAGGSNPKLETLQLQNNNLETQSWAILAQGIASLPILKTLE 306

Query: 129 VSENQFGEEGVEEMEKLMKSF 149
           V  N+  E+  E +  L  +F
Sbjct: 307 VQWNEV-EDDDESISALQSAF 326


>gi|320170770|gb|EFW47669.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 453

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 210/455 (46%), Gaps = 39/455 (8%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+  K+   V +  +GI       +++  ++N  L+ L+L+D+ I   GA  +G AL  
Sbjct: 12  LFETAKSFSSVVLSSSGITDEDALVIAEGLKQNNHLQMLDLSDSQIGDAGAQAIGLALRN 71

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P+L  LNL +  +  AGA +IA+ L  +TT+ ++ +  N+I  +G   +  A++ K  L
Sbjct: 72  KPTLGFLNLSENKIGDAGARAIAEGLQTSTTVTELWMRRNQIGDEGAQAIGSALQKKANL 131

Query: 125 KQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
             +++SEN+ G+ G   + E L  S  +    +  +  G               D+ A+ 
Sbjct: 132 SILHLSENKIGDIGTRAIAEGLQTSTALTQLWMFTNQIG---------------DAGAQA 176

Query: 184 DNSNLSHNDSNHSHNASNQS--HNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPI 240
             S L         N  N S  H + N+  +   ++    L+T   L EL L  N  G  
Sbjct: 177 IGSAL--------RNKPNLSILHLSWNKIGDAGARAIAEGLQTSTVLTELGLHSNQIGDA 228

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G + +   L++     L EL +NNN +G TG + +++    C  S+       AL  F  
Sbjct: 229 GAQAIGSALQNKAN--LSELYMNNNMIGGTGARAIAEG---CQTST-------ALTDFRM 276

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
             N + + GA+ L    +    L  + +  N I   G  A+++       L    ++ N 
Sbjct: 277 QANLIGDAGAQALGPALQNKANLSILYLNSNNISDTGALAIAEGLHAKTALTDFRMSINQ 336

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I   GA  +G AL  + +L+IL+LG+  +   GA ++A+ L    TL    ++ N++   
Sbjct: 337 IGDAGAQAIGSALRNMANLSILSLGENKIGDTGACAVAEGLQATATLTQFGMSANQVGDA 396

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           G   +  A++N+T L ++++S+NQ     V+ + +
Sbjct: 397 GARAIGSALRNQTNLSKLHLSDNQISSSAVQLLSQ 431



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 12/241 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+  A L  L LS+N  G IG   +A+ L++S   AL +L +  N +G  G + +  AL
Sbjct: 124 ALQKKANLSILHLSENKIGDIGTRAIAEGLQTST--ALTQLWMFTNQIGDAGAQAIGSAL 181

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +             L +     N++ + GA+ +A   +    L  + +  N I   G  
Sbjct: 182 RNKPN----------LSILHLSWNKIGDAGARAIAEGLQTSTVLTELGLHSNQIGDAGAQ 231

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+  A +   NL  L +N+N I   GA  + +      +L    +   L+  AGA ++  
Sbjct: 232 AIGSALQNKANLSELYMNNNMIGGTGARAIAEGCQTSTALTDFRMQANLIGDAGAQALGP 291

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L +   L  + L  N IS  G L + + +  KT L    +S NQ G+ G + +   +++
Sbjct: 292 ALQNKANLSILYLNSNNISDTGALAIAEGLHAKTALTDFRMSINQIGDAGAQAIGSALRN 351

Query: 460 F 460
            
Sbjct: 352 M 352



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 97/436 (22%), Positives = 184/436 (42%), Gaps = 61/436 (13%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDN------------ 48
           ++A   K+   L+ +++  + I   G  A+  A      L  LNL++N            
Sbjct: 36  VIAEGLKQNNHLQMLDLSDSQIGDAGAQAIGLALRNKPTLGFLNLSENKIGDAGARAIAE 95

Query: 49  ------TITY----------KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 92
                 T+T           +GA  +G AL K  +L+IL+L +  +   G  +IA+ L  
Sbjct: 96  GLQTSTTVTELWMRRNQIGDEGAQAIGSALQKKANLSILHLSENKIGDIGTRAIAEGLQT 155

Query: 93  NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           +T L  + +  N+I   G   +  A++NK  L  +++S N+ G+ G   + +     G+ 
Sbjct: 156 STALTQLWMFTNQIGDAGAQAIGSALRNKPNLSILHLSWNKIGDAGARAIAE-----GLQ 210

Query: 153 AALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN 212
            + VL          E    S +  D+ A+   S L  N +N S     + + N+N    
Sbjct: 211 TSTVL---------TELGLHSNQIGDAGAQAIGSAL-QNKANLS-----ELYMNNNMIGG 255

Query: 213 TSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG 271
           T  ++     +T   L +  +  N  G  G + L   L++    ++  L LN+N +  TG
Sbjct: 256 TGARAIAEGCQTSTALTDFRMQANLIGDAGAQALGPALQNKANLSI--LYLNSNNISDTG 313

Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
              +++ LH          +  AL  F    N++ + GA+ + +  + +  L  + + +N
Sbjct: 314 ALAIAEGLH----------AKTALTDFRMSINQIGDAGAQAIGSALRNMANLSILSLGEN 363

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
            I   G  A+++  +    L    ++ N +   GA  +G AL    +L+ L+L D  + S
Sbjct: 364 KIGDTGACAVAEGLQATATLTQFGMSANQVGDAGARAIGSALRNQTNLSKLHLSDNQISS 423

Query: 392 AGASSIAKYLTDNTTL 407
           +    +++ L  N  L
Sbjct: 424 SAVQLLSQSLPTNCEL 439



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 81/157 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           +++ + GA+ +    +   TL  + + +N I   G  A+++  + +  +  L +  N I 
Sbjct: 55  SQIGDAGAQAIGLALRNKPTLGFLNLSENKIGDAGARAIAEGLQTSTTVTELWMRRNQIG 114

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA  +G AL K  +L+IL+L +  +   G  +IA+ L  +T L  + +  N+I   G 
Sbjct: 115 DEGAQAIGSALQKKANLSILHLSENKIGDIGTRAIAEGLQTSTALTQLWMFTNQIGDAGA 174

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +  A++NK  L  +++S N+ G+ G   + + +++
Sbjct: 175 QAIGSALRNKPNLSILHLSWNKIGDAGARAIAEGLQT 211



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 105/266 (39%), Gaps = 30/266 (11%)

Query: 4   AVFKKLKT---LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           A+ + L+T   L  + +  N I   G  A+  A +    L  L +N+N I   GA  + +
Sbjct: 204 AIAEGLQTSTVLTELGLHSNQIGDAGAQAIGSALQNKANLSELYMNNNMIGGTGARAIAE 263

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
                 +L    +   L+  AGA ++   L +   L  + L  N IS  G L + + +  
Sbjct: 264 GCQTSTALTDFRMQANLIGDAGAQALGPALQNKANLSILYLNSNNISDTGALAIAEGLHA 323

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED----DEGECSDEEQDEESEEE 176
           KT L    +S NQ G+ G + +   +++    + L L +    D G C+           
Sbjct: 324 KTALTDFRMSINQIGDAGAQAIGSALRNMANLSILSLGENKIGDTGACAV---------- 373

Query: 177 NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
               AEG  +  +      S N    +   +  S         +L+    L +L LSDN 
Sbjct: 374 ----AEGLQATATLTQFGMSANQVGDAGARAIGS---------ALRNQTNLSKLHLSDNQ 420

Query: 237 FGPIGVEGLADLLRSSCCFALEELKL 262
                V+ L+  L ++C  A E  ++
Sbjct: 421 ISSSAVQLLSQSLPTNCELAAERQRI 446


>gi|320170518|gb|EFW47417.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 623

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 196/447 (43%), Gaps = 69/447 (15%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L++A + N K   L+L  N I   GA  + +AL    +L  L+L D  +  AGA +IA+ 
Sbjct: 35  LAEALQVNTKRADLSLGQNQIGCAGAGAIAEALKVNTTLVRLSLDDNQIGDAGAQAIAEA 94

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L  NT LE ++L  N I   G   + +A+K    L  +++S+NQ G+ G + +       
Sbjct: 95  LKVNTGLETLDLNWNRIGAAGTQAIAEALKVNKTLTNLDLSDNQMGDVGAQAI------- 147

Query: 150 GMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQ 209
                                          AEG   N + +  N + N   ++   +  
Sbjct: 148 -------------------------------AEGLKVNTTLDTLNLASNTIGEAGVIAE- 175

Query: 210 SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
                     +LK   RL +L L +N  G  G + +A+ L+ +    L EL L +N +G 
Sbjct: 176 ----------ALKVNTRLTQLRLGENRIGDAGAQAIAEALKVNPT--LRELMLGSNRIGD 223

Query: 270 TGCKLLSKAL------HDCYESSKKEGSPLA------------LKVFIAGRNRLENEGAK 311
            G + +++AL       +    S + G   A            L+  + G NR+ + GA+
Sbjct: 224 AGAQAIAEALKVNPTLRELVLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGAQ 283

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            +A V K    +  + +  N I  +G  A+++  + NK +++L +  N     GA+ + +
Sbjct: 284 AIAEVLKPNTAMTWLGLGGNQIGPLGAQAIAEMLKVNKTMKNLYVAGNRFGGDGALAIAE 343

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
           A     ++  L+L D  L  AGA SIA  L  NTT+  V L  N+I   G  ++  A+K 
Sbjct: 344 AFKVNTTMTTLDLRDNQLGDAGAMSIAGTLKVNTTVTGVYLCDNQIGSAGAREIALALKV 403

Query: 432 KTKLKQINVSENQFGEEGVEEMEKLMK 458
            T L  + +  NQ  E G +E+ K ++
Sbjct: 404 NTTLTSLGLRANQITETGAQEIAKALR 430



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 191/437 (43%), Gaps = 61/437 (13%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +  N I   G  A+++A + N  L  L+LN N I   G   + +A
Sbjct: 63  IAEALKVNTTLVRLSLDDNQIGDAGAQAIAEALKVNTGLETLDLNWNRIGAAGTQAIAEA 122

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L D  +   GA +IA+ L  NTTL+ +NL  N I   G   + +A+K  
Sbjct: 123 LKVNKTLTNLDLSDNQMGDVGAQAIAEGLKVNTTLDTLNLASNTIGEAG--VIAEALKVN 180

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           T+L Q+ + EN+ G+ G + + + +K       L+L                        
Sbjct: 181 TRLTQLRLGENRIGDAGAQAIAEALKVNPTLRELML------------------------ 216

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
                      SN   +A  Q+   +             LK    L EL L  N  G  G
Sbjct: 217 ----------GSNRIGDAGAQAIAEA-------------LKVNPTLRELVLGSNRIGDAG 253

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
            + +A+ L+ +    L EL L +N +G  G + +++ L              A+     G
Sbjct: 254 AQAIAEALKVNPT--LRELVLGSNRIGDAGAQAIAEVLKPNT----------AMTWLGLG 301

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
            N++   GA+ +A + K  KT++ + +  N     G  A+++AF+ N  +  L+L DN +
Sbjct: 302 GNQIGPLGAQAIAEMLKVNKTMKNLYVAGNRFGGDGALAIAEAFKVNTTMTTLDLRDNQL 361

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA+ +   L    ++  + L D  + SAGA  IA  L  NTTL  + L  N+I+  G
Sbjct: 362 GDAGAMSIAGTLKVNTTVTGVYLCDNQIGSAGAREIALALKVNTTLTSLGLRANQITETG 421

Query: 422 GLDLVKAMKNKTKLKQI 438
             ++ KA++   KLK +
Sbjct: 422 AQEIAKALRVNKKLKYL 438



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 169/387 (43%), Gaps = 61/387 (15%)

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +A+ L  NT   D++L  N+I   G   + +A+K  T L ++++ +NQ G+ G + + + 
Sbjct: 35  LAEALQVNTKRADLSLGQNQIGCAGAGAIAEALKVNTTLVRLSLDDNQIGDAGAQAIAEA 94

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
           +K                                     N+ L   D N +   +  +  
Sbjct: 95  LKV------------------------------------NTGLETLDLNWNRIGAAGTQA 118

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
            +            +LK    L  LDLSDN  G +G + +A+ L+ +    L+ L L +N
Sbjct: 119 IAE-----------ALKVNKTLTNLDLSDNQMGDVGAQAIAEGLKVNTT--LDTLNLASN 165

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
            +G  G  ++++AL      ++       L++   G NR+ + GA+ +A   K   TL  
Sbjct: 166 TIGEAG--VIAEALKVNTRLTQ-------LRL---GENRIGDAGAQAIAEALKVNPTLRE 213

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + +  N I   G  A+++A + N  LR L L  N I   GA  + +AL   P+L  L LG
Sbjct: 214 LMLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGAQAIAEALKVNPTLRELVLG 273

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
              +  AGA +IA+ L  NT +  + L  N+I   G   + + +K    +K + V+ N+F
Sbjct: 274 SNRIGDAGAQAIAEVLKPNTAMTWLGLGGNQIGPLGAQAIAEMLKVNKTMKNLYVAGNRF 333

Query: 446 GEEGVEEMEKLMKSFGMAAALVLEDDE 472
           G +G   + +  K       L L D++
Sbjct: 334 GGDGALAIAEAFKVNTTMTTLDLRDNQ 360



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A   K    L  + + +N I   G  A+++A + N  LR L L  N I   GA  + +
Sbjct: 172 VIAEALKVNTRLTQLRLGENRIGDAGAQAIAEALKVNPTLRELMLGSNRIGDAGAQAIAE 231

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL   P+L  L LG   +  AGA +IA+ L  N TL ++ L  N I   G   + + +K 
Sbjct: 232 ALKVNPTLRELVLGSNRIGDAGAQAIAEALKVNPTLRELVLGSNRIGDAGAQAIAEVLKP 291

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
            T +  + +  NQ G  G + + +++K
Sbjct: 292 NTAMTWLGLGGNQIGPLGAQAIAEMLK 318


>gi|358053939|dbj|GAA99904.1| hypothetical protein E5Q_06607 [Mixia osmundae IAM 14324]
          Length = 419

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 130/244 (53%), Gaps = 9/244 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG   VE + D L  +   AL  LKLNNNGLG  G  +++ AL     +SK++
Sbjct: 99  IDLSDNAFGGRSVEPMVDFLVGNT--ALSILKLNNNGLGPAGGSVVADALTASAANSKQK 156

Query: 290 GSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGI-TALSDAFEE 347
           G    L+  + GRNRLEN  A   A A+     +++ V+M QNGI   G  T ++D    
Sbjct: 157 GKRTNLQTIVCGRNRLENGSAPAWAKAIRAHASSIKEVKMVQNGIRPEGFATLVTDGLRH 216

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NT 405
             +L  L+L DNT T +G+  + +AL   P L  LNL DCLL+  GA  I + L    N 
Sbjct: 217 CPSLETLDLQDNTATLRGSRAIARALPHWPKLKSLNLSDCLLRPKGAVMIMEALNKGHNP 276

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEG--VEEMEKLMKSFGM 462
            L ++ L  NEI  +    L  A+ +  K L  I ++ N+ G+E   V ++   +++ G 
Sbjct: 277 ELTELKLQSNEIDDRAVRILKLALGSHLKRLSVIELNGNRVGDEDEVVIDLRSALETNGF 336

Query: 463 AAAL 466
             AL
Sbjct: 337 PDAL 340



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 6/158 (3%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A+     +++ V+M QNGI   G  T ++D       L  L+L DNT T +G+  + +AL
Sbjct: 183 AIRAHASSIKEVKMVQNGIRPEGFATLVTDGLRHCPSLETLDLQDNTATLRGSRAIARAL 242

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
              P L  LNL DCLL+  GA  I + L    N  L ++ L  NEI  +    L  A+ +
Sbjct: 243 PHWPKLKSLNLSDCLLRPKGAVMIMEALNKGHNPELTELKLQSNEIDDRAVRILKLALGS 302

Query: 121 KTK-LKQINVSENQFGEEG--VEEMEKLMKSFGMAAAL 155
             K L  I ++ N+ G+E   V ++   +++ G   AL
Sbjct: 303 HLKRLSVIELNGNRVGDEDEVVIDLRSALETNGFPDAL 340


>gi|170090211|ref|XP_001876328.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649588|gb|EDR13830.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 402

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 104/182 (57%), Gaps = 6/182 (3%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    LVEL+LSDNAFG   V+ +   L  +  F +  LKLNNNGLG  G  ++++AL
Sbjct: 92  ALKDKTSLVELNLSDNAFGGRSVDPMVPFLTHNRSFQI--LKLNNNGLGPAGGSVIAEAL 149

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +    SK EG    L+  I GRNRLEN  A   A  F    TL  V MPQNGI   G+T
Sbjct: 150 VESARLSKAEGRTSNLRTVICGRNRLENGSAPAWAEAFAAHGTLVEVRMPQNGIRMEGVT 209

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK-LPS---LAILNLGDCLLKSAGAS 395
           AL+    +N +L+H++L DNT T  G +   +A ++ LPS   L  LNL DC+L + G  
Sbjct: 210 ALARGLAKNPHLQHIDLQDNTFTADGELTGLEAWTEALPSWLDLHTLNLSDCVLSAEGEV 269

Query: 396 SI 397
            I
Sbjct: 270 PI 271



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK-LPS-- 67
           TL  V MPQNGI   G+TAL+    +N  L+H++L DNT T  G +   +A ++ LPS  
Sbjct: 192 TLVEVRMPQNGIRMEGVTALARGLAKNPHLQHIDLQDNTFTADGELTGLEAWTEALPSWL 251

Query: 68  -LAILNLGDCLLKSAGASSI 86
            L  LNL DC+L + G   I
Sbjct: 252 DLHTLNLSDCVLSAEGEVPI 271



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 51/225 (22%)

Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
           G KL ++A  + Y    K+  P  ++    G N L  + ++ LA    K K L+  +   
Sbjct: 16  GLKLNTRADIEPY---LKDVDPTTIEEIHFGGNTLGVDASQALAEFLDKTKVLKVADFAD 72

Query: 331 NGIY--------HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
             I+         + ++A+ DA ++  +L  LNL+DN    +   P+   L+   S  IL
Sbjct: 73  --IFTGRLISEIPLALSAICDALKDKTSLVELNLSDNAFGGRSVDPMVPFLTHNRSFQIL 130

Query: 383 NLGDCLLKSAGASSIAKYLTDNT------------------------------------- 405
            L +  L  AG S IA+ L ++                                      
Sbjct: 131 KLNNNGLGPAGGSVIAEALVESARLSKAEGRTSNLRTVICGRNRLENGSAPAWAEAFAAH 190

Query: 406 -TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            TL +V +  N I ++G   L + +     L+ I++ +N F  +G
Sbjct: 191 GTLVEVRMPQNGIRMEGVTALARGLAKNPHLQHIDLQDNTFTADG 235


>gi|320166401|gb|EFW43300.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 575

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 214/457 (46%), Gaps = 33/457 (7%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           M  N I   G  A+++  + + +L    ++ N I   GA  +G AL    +L+ILNL + 
Sbjct: 80  MTSNMIGDAGARAIAEGLQASPELADFRMDTNQIGDAGAQAIGVALRNKANLSILNLDEN 139

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
            +  AGA +IA+ L  +T L ++ ++ N+I   G   +  A+ NK  L  +++ EN+ G+
Sbjct: 140 KIGDAGARAIAEGLQTSTALTELRMSSNQIGDAGAQAIGAALGNKANLSMLDLHENKIGD 199

Query: 137 EGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHS 196
            G   + + +++    A L +               + +  D+ A+   S L  N +N S
Sbjct: 200 AGARAIAEGLRTSTALAKLGMH--------------ANQIGDAGAQAIGSAL-QNKANLS 244

Query: 197 HNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
                  + +SN+  +   +S    L+T   L++L +  N  G  G + +   LR+    
Sbjct: 245 -----MLYLSSNKIGDAGARSIAEGLQTSIELIDLRMDTNQIGDTGAQAIGSALRNKPDL 299

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           ++  L L+ N +G  G + +++ L    E +      L ++      N++ + GA+ +  
Sbjct: 300 SV--LYLDENKIGDAGARAIAEGLQTSAELTD-----LRMQT-----NQIGDAGAQAIGL 347

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
             +    L  + + +N I   G +A+++  + +  L  L ++ N     GA  +G AL  
Sbjct: 348 ALRNKANLSMLYLEENNIGDAGASAVAEGLQTSTALTELRMHTNQFGDTGAKAIGSALRN 407

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
            P+L++L L    +  +GA +IA+ L  +T L  +++  N+I   G   +  A++NK  L
Sbjct: 408 KPNLSVLGLNSNKIGDSGARAIAEGLKTSTALAVLDMFNNQIGDAGAQAIGSALRNKAGL 467

Query: 436 KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             + +S NQ G+ G   + + ++   +  AL + D++
Sbjct: 468 AMLYLSSNQIGDSGARAIAEGIQGSAVLTALRMHDNQ 504



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 27/419 (6%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + + +N I   G  A+++  + +  L  L ++ N I   GA  +G AL    +L++L
Sbjct: 131 LSILNLDENKIGDAGARAIAEGLQTSTALTELRMSSNQIGDAGAQAIGAALGNKANLSML 190

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L +  +  AGA +IA+ L  +T L  + +  N+I   G   +  A++NK  L  + +S 
Sbjct: 191 DLHENKIGDAGARAIAEGLRTSTALAKLGMHANQIGDAGAQAIGSALQNKANLSMLYLSS 250

Query: 132 NQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDE-EQDEESEEENDSDAE------- 182
           N+ G+ G   + E L  S  +   + L  D  +  D   Q   S   N  D         
Sbjct: 251 NKIGDAGARSIAEGLQTSIEL---IDLRMDTNQIGDTGAQAIGSALRNKPDLSVLYLDEN 307

Query: 183 --GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGP 239
             GD    +  +   +          +NQ  +   Q+  ++L+  A L  L L +N  G 
Sbjct: 308 KIGDAGARAIAEGLQTSAELTDLRMQTNQIGDAGAQAIGLALRNKANLSMLYLEENNIGD 367

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
            G   +A+ L++S   AL EL+++ N  G TG K +  AL +     K   S L L    
Sbjct: 368 AGASAVAEGLQTST--ALTELRMHTNQFGDTGAKAIGSALRN-----KPNLSVLGLN--- 417

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N++ + GA+ +A   K    L  ++M  N I   G  A+  A      L  L L+ N
Sbjct: 418 --SNKIGDSGARAIAEGLKTSTALAVLDMFNNQIGDAGAQAIGSALRNKAGLAMLYLSSN 475

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
            I   GA  + + +     L  L + D  +  AGA +I   L +   L  ++L+ N+IS
Sbjct: 476 QIGDSGARAIAEGIQGSAVLTALRMHDNQIGDAGAQAIGFALWNKAELSKLSLSQNQIS 534



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 79/157 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + + GA+ +    +    L  + M  N I   G  A+++  + +  L    ++ N I 
Sbjct: 55  NEIGDAGARAIGLALRTKSNLCNLYMTSNMIGDAGARAIAEGLQASPELADFRMDTNQIG 114

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  +G AL    +L+ILNL +  +  AGA +IA+ L  +T L ++ ++ N+I   G 
Sbjct: 115 DAGAQAIGVALRNKANLSILNLDENKIGDAGARAIAEGLQTSTALTELRMSSNQIGDAGA 174

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +  A+ NK  L  +++ EN+ G+ G   + + +++
Sbjct: 175 QAIGAALGNKANLSMLDLHENKIGDAGARAIAEGLRT 211



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           +++ +E A ++A   K+   L+ +++  N I   G  A+  A     NL +L +  N I 
Sbjct: 27  SKITDEDALVIAKGLKENSKLQLLDLEDNEIGDAGARAIGLALRTKSNLCNLYMTSNMIG 86

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + + L   P LA   +    +  AGA +I   L +   L  +NL  N+I   G 
Sbjct: 87  DAGARAIAEGLQASPELADFRMDTNQIGDAGAQAIGVALRNKANLSILNLDENKIGDAGA 146

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             + + ++  T L ++ +S NQ G+ G + +
Sbjct: 147 RAIAEGLQTSTALTELRMSSNQIGDAGAQAI 177



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 64/129 (49%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  A+++  + +  L  L++ +N I   GA  +G AL     LA+L L    + 
Sbjct: 419 NKIGDSGARAIAEGLKTSTALAVLDMFNNQIGDAGAQAIGSALRNKAGLAMLYLSSNQIG 478

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            +GA +IA+ +  +  L  + +  N+I   G   +  A+ NK +L ++++S+NQ     V
Sbjct: 479 DSGARAIAEGIQGSAVLTALRMHDNQIGDAGAQAIGFALWNKAELSKLSLSQNQISPSVV 538

Query: 140 EEMEKLMKS 148
           +   K + +
Sbjct: 539 QLFSKRLPA 547


>gi|336370155|gb|EGN98496.1| hypothetical protein SERLA73DRAFT_12877 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 337

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 124/250 (49%), Gaps = 13/250 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    LVE++LSDNAFG   V+ +   L  +  F +  L+L NNGLG  G  +++ AL
Sbjct: 87  ALKDKTSLVEINLSDNAFGGRSVDPMVPFLTHNHSFQI--LRLTNNGLGPAGGAVIADAL 144

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
           H+    SK EG    L   I GRNRLEN  A   A  F    TL  V MPQNGI   G+T
Sbjct: 145 HESARLSKAEGKTSKLHTVICGRNRLENGSATAWAEAFAAHGTLTDVRMPQNGIRMEGMT 204

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGA----IPLGQALSKLPSLAILNLGDCLLKSAG-A 394
           AL++   +   L+H++  DNT T  G+         ALS  P L  LNL DC+L + G  
Sbjct: 205 ALANGLSKCPALQHIDFQDNTFTEDGSEMGVKAWADALSSWPDLTTLNLSDCVLSNEGEI 264

Query: 395 SSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF--GEEGV 450
             + K LT   N  L+ + L  N +  Q    L  A+   T L  I   E Q+   EE  
Sbjct: 265 PLLLKALTTGSNIKLQSLQLQNNNLEAQTFALLADAI--STHLSSIKTLELQWNDAEEDD 322

Query: 451 EEMEKLMKSF 460
           E ++ +  + 
Sbjct: 323 ENLDTIADTL 332



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGA----IPLGQALSKLP 66
           TL  V MPQNGI   G+TAL++   +   L+H++  DNT T  G+         ALS  P
Sbjct: 187 TLTDVRMPQNGIRMEGMTALANGLSKCPALQHIDFQDNTFTEDGSEMGVKAWADALSSWP 246

Query: 67  SLAILNLGDCLLKSAG-ASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
            L  LNL DC+L + G    + K LT   N  L+ + L  N +  Q    L  A+   T 
Sbjct: 247 DLTTLNLSDCVLSNEGEIPLLLKALTTGSNIKLQSLQLQNNNLEAQTFALLADAI--STH 304

Query: 124 LKQINVSENQF--GEEGVEEMEKLMKSF 149
           L  I   E Q+   EE  E ++ +  + 
Sbjct: 305 LSSIKTLELQWNDAEEDDENLDTIADTL 332


>gi|443920635|gb|ELU40521.1| Ran GTPase activator [Rhizoctonia solani AG-1 IA]
          Length = 615

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 99/183 (54%), Gaps = 3/183 (1%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    ++EL+LSDNAFG    E +   L  +  F +   KLNNNGLGI G ++++ AL
Sbjct: 100 ALKDKKSIIELNLSDNAFGGRSAEPMVPFLTHNRSFQV--FKLNNNGLGIAGGEIIANAL 157

Query: 280 HDCYESSKKEG-SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
               E+SK EG     L+  I GRNRLEN  A   A  F     L  V MPQNGI   GI
Sbjct: 158 LANAEASKAEGIHTTPLRTVICGRNRLENGSAPFWARAFAAHGGLTEVRMPQNGIRMEGI 217

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             +S    +   L+ L+L DNT T  G+  + ++L   P L ILNL DCLL   G  ++A
Sbjct: 218 AEISKGLAKCSKLQILDLQDNTCTESGSRAVAESLKSWPDLRILNLSDCLLGPKGGIALA 277

Query: 399 KYL 401
             L
Sbjct: 278 TAL 280



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 46/90 (51%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
             A  F     L  V MPQNGI   GI  +S    +  KL+ L+L DNT T  G+  + +
Sbjct: 191 FWARAFAAHGGLTEVRMPQNGIRMEGIAEISKGLAKCSKLQILDLQDNTCTESGSRAVAE 250

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYL 90
           +L   P L ILNL DCLL   G  ++A  L
Sbjct: 251 SLKSWPDLRILNLSDCLLGPKGGIALATAL 280


>gi|326430794|gb|EGD76364.1| hypothetical protein PTSG_11683 [Salpingoeca sp. ATCC 50818]
          Length = 634

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 125/248 (50%), Gaps = 11/248 (4%)

Query: 218 HMSLKTGAR-------LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGIT 270
           H SLK  A        L  LD SDNA  P G E +A LL  S C  L+EL LNN G+G  
Sbjct: 130 HPSLKFFAEAFLNFDNLTVLDFSDNAVNPSGAENIAPLL--SQCLTLKELYLNNTGVGPA 187

Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
           G + + KAL   +    + G P  L+ F+ GR+RLE  G + ++  F +++TL  + +  
Sbjct: 188 GGETIGKALQAAHARGVQLGQPYCLEKFVLGRSRLEIPGCREVSKAFARIRTLREIRINN 247

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           NGI+  G+   + A  +  NL  L ++DN +  +  + L +AL  L  L +    D  L+
Sbjct: 248 NGIFTEGLVDFAQAVAKCPNLEVLEVSDNHLKTRAGLALAKALRHLKRLRVFISSDTGLQ 307

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
                +I   L  +T +  +NL  NE+S +    ++  +  KT  + ++V  N+FGE G 
Sbjct: 308 DRAGLAIVDSLA-HTPISVLNLAYNEMSKKVLTRILTKLNGKT-FELLDVQGNEFGENGY 365

Query: 451 EEMEKLMK 458
            ++E +  
Sbjct: 366 AQLEDMFP 373



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           F +++TL  + +  NGI+  G+   + A  +   L  L ++DN +  +  + L +AL  L
Sbjct: 234 FARIRTLREIRINNNGIFTEGLVDFAQAVAKCPNLEVLEVSDNHLKTRAGLALAKALRHL 293

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
             L +    D  L+     +I   L  +T +  +NL  NE+S +    ++  +  KT  +
Sbjct: 294 KRLRVFISSDTGLQDRAGLAIVDSLA-HTPISVLNLAYNEMSKKVLTRILTKLNGKT-FE 351

Query: 126 QINVSENQFGEEGVEEMEKLMK 147
            ++V  N+FGE G  ++E +  
Sbjct: 352 LLDVQGNEFGENGYAQLEDMFP 373


>gi|336382922|gb|EGO24072.1| hypothetical protein SERLADRAFT_450362 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 397

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 124/250 (49%), Gaps = 13/250 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    LVE++LSDNAFG   V+ +   L  +  F +  L+L NNGLG  G  +++ AL
Sbjct: 90  ALKDKTSLVEINLSDNAFGGRSVDPMVPFLTHNHSFQI--LRLTNNGLGPAGGAVIADAL 147

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
           H+    SK EG    L   I GRNRLEN  A   A  F    TL  V MPQNGI   G+T
Sbjct: 148 HESARLSKAEGKTSKLHTVICGRNRLENGSATAWAEAFAAHGTLTDVRMPQNGIRMEGMT 207

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGA----IPLGQALSKLPSLAILNLGDCLLKSAG-A 394
           AL++   +   L+H++  DNT T  G+         ALS  P L  LNL DC+L + G  
Sbjct: 208 ALANGLSKCPALQHIDFQDNTFTEDGSEMGVKAWADALSSWPDLTTLNLSDCVLSNEGEI 267

Query: 395 SSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF--GEEGV 450
             + K LT   N  L+ + L  N +  Q    L  A+   T L  I   E Q+   EE  
Sbjct: 268 PLLLKALTTGSNIKLQSLQLQNNNLEAQTFALLADAI--STHLSSIKTLELQWNDAEEDD 325

Query: 451 EEMEKLMKSF 460
           E ++ +  + 
Sbjct: 326 ENLDTIADTL 335



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGA----IPLGQALSKLP 66
           TL  V MPQNGI   G+TAL++   +   L+H++  DNT T  G+         ALS  P
Sbjct: 190 TLTDVRMPQNGIRMEGMTALANGLSKCPALQHIDFQDNTFTEDGSEMGVKAWADALSSWP 249

Query: 67  SLAILNLGDCLLKSAG-ASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
            L  LNL DC+L + G    + K LT   N  L+ + L  N +  Q    L  A+   T 
Sbjct: 250 DLTTLNLSDCVLSNEGEIPLLLKALTTGSNIKLQSLQLQNNNLEAQTFALLADAI--STH 307

Query: 124 LKQINVSENQF--GEEGVEEMEKLMKSF 149
           L  I   E Q+   EE  E ++ +  + 
Sbjct: 308 LSSIKTLELQWNDAEEDDENLDTIADTL 335


>gi|74228882|dbj|BAE21919.1| unnamed protein product [Mus musculus]
          Length = 396

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 7   LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 66

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 67  LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 126

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 127 KAELEKLDLNGNDLGEEGCEQLQEVMDSFNMAKVL 161



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           LA  F  + TLE V MPQNGI H G+TAL+ AF  N  LR +NLNDNT T KG + + + 
Sbjct: 7   LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 66

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 431
           L  L  + ++N GDCL++S GA +IA  +      L+++NL+  EI     L + +A+ +
Sbjct: 67  LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 126

Query: 432 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
           K +L++++++ N  GEEG E+++++M SF MA  L
Sbjct: 127 KAELEKLDLNGNDLGEEGCEQLQEVMDSFNMAKVL 161


>gi|328850057|gb|EGF99227.1| hypothetical protein MELLADRAFT_94827 [Melampsora larici-populina
           98AG31]
          Length = 528

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 131/245 (53%), Gaps = 18/245 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG   V+ +   L S     LEEL+L NNGLG  G  +++ AL++    +++ 
Sbjct: 99  IDLSDNAFGGRCVDSMVPFLSSH--LPLEELRLANNGLGPAGATVIADALYELGLKARQA 156

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
             P  L+  I GRNR EN  AK    VF+    L  V + QN   + G   L        
Sbjct: 157 NQPSRLRKIICGRNRCENGSAKSWGRVFEVHSELTEVRLFQNDFRNHGWDPLMSGLACCS 216

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTL 407
            L  L++ DNT T KG+  +  AL +L +L  LNLGDCLL+  G + IA+ L   +N+ L
Sbjct: 217 KLEVLDMWDNTATEKGSRAVASALPQLKNLRELNLGDCLLRPRGGAMIARALKLGNNSKL 276

Query: 408 EDVNLTCNEI--SVQGGL-DLVKAMKNKTKLKQINVSENQFGE-EGVEE-------MEKL 456
           E + L+ +EI   V G L D V      +KLK++ +++N FG+ E  EE       M+K 
Sbjct: 277 ELLKLSGSEIDEEVVGLLVDFVTGY--GSKLKRVELNDN-FGDAEAAEELTGVWGNMKKA 333

Query: 457 MKSFG 461
           + ++G
Sbjct: 334 LDTWG 338



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 16/159 (10%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           VF+    L  V + QN   + G   L        KL  L++ DNT T KG+  +  AL +
Sbjct: 183 VFEVHSELTEVRLFQNDFRNHGWDPLMSGLACCSKLEVLDMWDNTATEKGSRAVASALPQ 242

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEI--SVQGGL-DLVKAMK 119
           L +L  LNLGDCLL+  G + IA+ L   +N+ LE + L+ +EI   V G L D V    
Sbjct: 243 LKNLRELNLGDCLLRPRGGAMIARALKLGNNSKLELLKLSGSEIDEEVVGLLVDFVTGY- 301

Query: 120 NKTKLKQINVSENQFGE-EGVEE-------MEKLMKSFG 150
             +KLK++ +++N FG+ E  EE       M+K + ++G
Sbjct: 302 -GSKLKRVELNDN-FGDAEAAEELTGVWGNMKKALDTWG 338


>gi|403412159|emb|CCL98859.1| predicted protein [Fibroporia radiculosa]
          Length = 386

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/250 (39%), Positives = 128/250 (51%), Gaps = 10/250 (4%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVE+DLSDNAFG   V+ +   L  +  F +  LKLNNNGLG  G   ++ AL    E S
Sbjct: 93  LVEIDLSDNAFGGRSVDPMVPFLTQNRSFQV--LKLNNNGLGPAGGATVADALLRSAELS 150

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
              G P  L+V I GRNRLE+  A   AA F     L  V MPQNGI   G  AL+    
Sbjct: 151 AAAGEPSNLRVVICGRNRLEDGAAPAWAAAFSAHGGLTEVRMPQNGIRMAGAAALAHGLS 210

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA-SSIAKYLT--D 403
               L HL+L DNT    G++ +  AL   PSL  LNL DC+L   GA S + + L    
Sbjct: 211 SCAGLAHLDLQDNTFGETGSVAMATALRAWPSLRFLNLSDCVLAEEGAVSPVLEALVGGS 270

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGE--EGVEEMEKLMKSF 460
           N  LE + L  N +  Q    L + ++ +   LK + +  N+  E  EG+  + +LMK  
Sbjct: 271 NPKLEVLQLQNNNLEAQSFSLLAEGLELHLPVLKMLEMQWNEVEEDDEGIAALLRLMKKR 330

Query: 461 GMAAALVLED 470
           G    LVL+D
Sbjct: 331 G--GKLVLDD 338



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  V MPQNGI   G  AL+        L HL+L DNT    G++ +  AL   PSL  L
Sbjct: 187 LTEVRMPQNGIRMAGAAALAHGLSSCAGLAHLDLQDNTFGETGSVAMATALRAWPSLRFL 246

Query: 72  NLGDCLLKSAGA-SSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQI 127
           NL DC+L   GA S + + L    N  LE + L  N +  Q    L + ++ +   LK +
Sbjct: 247 NLSDCVLAEEGAVSPVLEALVGGSNPKLEVLQLQNNNLEAQSFSLLAEGLELHLPVLKML 306

Query: 128 NVSENQFGE--EGVEEMEKLMKSFGMAAALVLED 159
            +  N+  E  EG+  + +LMK  G    LVL+D
Sbjct: 307 EMQWNEVEEDDEGIAALLRLMKKRG--GKLVLDD 338


>gi|390603503|gb|EIN12895.1| RNI-like protein, partial [Punctularia strigosozonata HHB-11173
           SS5]
          Length = 384

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 120/247 (48%), Gaps = 14/247 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVE+DLSDNAFG      +   L  +  F++  LKLNNNGLG  G  +++ AL +    S
Sbjct: 94  LVEIDLSDNAFGARSAVPMVPFLTKNRSFSI--LKLNNNGLGPAGGAVIASALLESARLS 151

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           +KEG    LK  I GRNRLE+  A   A  F    TLE V MPQNGI   GI AL+    
Sbjct: 152 EKEGKKSNLKTIICGRNRLEDGSALTWAEAFAAHGTLEDVRMPQNGIRQDGIIALAKGLS 211

Query: 347 ENKNLRHLNLNDNTITY----KGAIPLGQALSKLPSLAILNLGDCLLKSAG---ASSIAK 399
           +N  L  L+L DN        +G+  +  AL   P L  L+  DC++ S       +I  
Sbjct: 212 KNPALERLDLQDNAFNVDDSDEGSRAMANALPLWPGLQQLDFSDCVIASEDDHTPPAIID 271

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGE--EGVEEME 454
            L    N  L  + L  N I  +    L +++  +   LK++ +  N   E  E +  M 
Sbjct: 272 ALAAGSNPKLHTLQLQNNNIGAESFAMLAESLPQRMPLLKRLELQWNDIDEDDEALNTMT 331

Query: 455 KLMKSFG 461
            L+K+ G
Sbjct: 332 DLLKARG 338



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 12/161 (7%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITY----KGAIP 57
            A  F    TLE V MPQNGI   GI AL+    +N  L  L+L DN        +G+  
Sbjct: 178 WAEAFAAHGTLEDVRMPQNGIRQDGIIALAKGLSKNPALERLDLQDNAFNVDDSDEGSRA 237

Query: 58  LGQALSKLPSLAILNLGDCLLKSAG---ASSIAKYLT--DNTTLEDVNLTCNEISVQGGL 112
           +  AL   P L  L+  DC++ S       +I   L    N  L  + L  N I  +   
Sbjct: 238 MANALPLWPGLQQLDFSDCVIASEDDHTPPAIIDALAAGSNPKLHTLQLQNNNIGAESFA 297

Query: 113 DLVKAMKNKTK-LKQINVSENQFGE--EGVEEMEKLMKSFG 150
            L +++  +   LK++ +  N   E  E +  M  L+K+ G
Sbjct: 298 MLAESLPQRMPLLKRLELQWNDIDEDDEALNTMTDLLKARG 338



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 44/201 (21%)

Query: 301 GRNRLENEGAKMLAAVFKK---LKTLERVEMPQNGIY---HVGITALSDAFEENKNLRHL 354
           G N +    AK LAA   K   LK  +  ++  + +     V ++A+ DA  +  +L  +
Sbjct: 38  GGNTIGVGAAKALAAFLTKADKLKIADFADIFTSRLIDEIPVALSAMCDALIDKTSLVEI 97

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--------- 405
           +L+DN    + A+P+   L+K  S +IL L +  L  AG + IA  L ++          
Sbjct: 98  DLSDNAFGARSAVPMVPFLTKNRSFSILKLNNNGLGPAGGAVIASALLESARLSEKEGKK 157

Query: 406 -----------------------------TLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
                                        TLEDV +  N I   G + L K +     L+
Sbjct: 158 SNLKTIICGRNRLEDGSALTWAEAFAAHGTLEDVRMPQNGIRQDGIIALAKGLSKNPALE 217

Query: 437 QINVSENQFGEEGVEEMEKLM 457
           ++++ +N F  +  +E  + M
Sbjct: 218 RLDLQDNAFNVDDSDEGSRAM 238



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 38/160 (23%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           V ++A+ DA  +   L  ++L+DN    + A+P+   L+K  S +IL L +  L  AG +
Sbjct: 79  VALSAMCDALIDKTSLVEIDLSDNAFGARSAVPMVPFLTKNRSFSILKLNNNGLGPAGGA 138

Query: 85  SIAKYLTDNT--------------------------------------TLEDVNLTCNEI 106
            IA  L ++                                       TLEDV +  N I
Sbjct: 139 VIASALLESARLSEKEGKKSNLKTIICGRNRLEDGSALTWAEAFAAHGTLEDVRMPQNGI 198

Query: 107 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
              G + L K +     L+++++ +N F  +  +E  + M
Sbjct: 199 RQDGIIALAKGLSKNPALERLDLQDNAFNVDDSDEGSRAM 238


>gi|188501476|gb|ACD54608.1| leucine rich repeat containing proteins-like protein [Adineta vaga]
          Length = 1420

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 222/497 (44%), Gaps = 63/497 (12%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-------------------KKLRH 42
           LA  F+  KTL ++ +  N +   GI  L+DAF  N                   K LR+
Sbjct: 107 LANAFRNNKTLVNINLSNNQLGDEGIEYLADAFRYNTVIMDFSNRITDYGAECLAKTLRN 166

Query: 43  ------LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
                 L+L  N I+ KG   L +AL    +L  L+L    +   GA S+A  L +NT L
Sbjct: 167 NTTINTLDLRWNNISTKGTQQLAEALPHNTTLTNLDLSWNAIDDQGAQSLADALQNNTIL 226

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
           E +NL  N I   G   LV + +N   L   N+S N  G +G++ +   +K+      L 
Sbjct: 227 ETLNLASNRIGGHGAQQLVASRQNHDILTTFNLSSNHIGHDGMKLLADALKTNKSIVTLD 286

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
           L                     S+  GD+  + H      +N +  + N S+    TS  
Sbjct: 287 LA--------------------SNRIGDDG-VQHLIVALKNNTTLTTLNLSSNQIRTSGI 325

Query: 217 SHMS--LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
           +++S  ++    L  +DLS N  G  G + LA ++ ++    +  L ++NN +G +G + 
Sbjct: 326 AYLSQAIEDTTALTVIDLSYNEIGITGAKDLATIILTNAT--ITTLLVSNNQIGSSGIQY 383

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           +S AL       +   + +++ +    +N++ +EG K LA   K   T+  +++ QN I 
Sbjct: 384 ISYAL-------QNNTTIISIDL---SKNQIGDEGMKHLANALKHNTTITTIDLSQNQIT 433

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSA 392
             GI  L +  + N  L +++L  N IT KGA  L  ++ +   + I  LNL   L+   
Sbjct: 434 DKGIEHLGNVLKFNTTLTNISLVSNKITDKGADSLASSIQQ-HKIMINELNLAHNLIGDQ 492

Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
           GA S+A YL   TTL  + L  N I+      L  A ++ T L  +N+S +Q  EE  + 
Sbjct: 493 GARSLANYLQYQTTLTKLELIGNPITSNASRYLSDAFRHNTTLVSLNLSLSQIDEEERQT 552

Query: 453 MEKLMKSFGMAAALVLE 469
           +    +S     +L LE
Sbjct: 553 VTNAYRSNSTFTSLDLE 569



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 208/476 (43%), Gaps = 51/476 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K   T+  +++ QN I   GI  L +  + N  L +++L  N IT KGA  L  +
Sbjct: 412 LANALKHNTTITTIDLSQNQITDKGIEHLGNVLKFNTTLTNISLVSNKITDKGADSLASS 471

Query: 62  LSKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           + +   + I  LNL   L+   GA S+A YL   TTL  + L  N I+      L  A +
Sbjct: 472 IQQ-HKIMINELNLAHNLIGDQGARSLANYLQYQTTLTKLELIGNPITSNASRYLSDAFR 530

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE-GECSDEEQDEESEEEND 178
           + T L  +N+S +Q  EE  + +    +S     +L LE    G    +     S     
Sbjct: 531 HNTTLVSLNLSLSQIDEEERQTVTNAYRSNSTFTSLDLEHSGIGRTGAQILTTLS----- 585

Query: 179 SDAEGDNSNLSHNDSN-----HSHNA-----SNQSHNNSNQSHNTSN----QSHMSLKTG 224
                 N NL HN        H   A      N+  ++    H +SN    Q+ +  +T 
Sbjct: 586 ------NLNLRHNKITGKAIQHLSEALRTGTVNEYFSHYFSFHVSSNIDWIQNFLPPQT- 638

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
             L  LDL+ N  G  G   LAD +R++    +  L L +N +G  G + L+  L     
Sbjct: 639 --LTTLDLAANGIGTEGARYLADAIRNNKT--ITSLDLKSNKIGSGGVRYLADTL----- 689

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
                   + L +   G N +  EG + L  VF+  KTL  +++  NGI   G   L++A
Sbjct: 690 --------VTLDL---GSNAIGTEGIQYLVDVFQDNKTLSALDLGTNGIGVDGAQHLANA 738

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
           F  N  L  L+L  N I  +G   L        +L IL+L    +   GA  +A+   +N
Sbjct: 739 FRNNVTLTTLDLRGNEIGVEGVRHLSDMFRDNKTLTILDLRSNGIGDKGAQYLAEAFRNN 798

Query: 405 TTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            TL  ++L  N I  +G    L+ A ++   L  +++S+N+   EGV+ +   +++
Sbjct: 799 NTLTTLHLGSNGIRAKGIRYLLLDAFQSNQTLTYLDLSDNKISLEGVKYLADGLRT 854



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 187/425 (44%), Gaps = 42/425 (9%)

Query: 38  KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 97
           + L  L+ ++  I YKGA  L  A+    +L  L+L    +   G   +A  L  N T+ 
Sbjct: 31  QTLEQLDFSNKQIGYKGAEQLADAVRNSTTLTELDLSKNHIGDQGVQYLADALLHNKTIA 90

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK--SFGMAAAL 155
            ++L  N I   G   L  A +N   L  IN+S NQ G+EG+E +    +  +  M  + 
Sbjct: 91  TLDLADNSIGAHGAHHLANAFRNNKTLVNINLSNNQLGDEGIEYLADAFRYNTVIMDFSN 150

Query: 156 VLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSN 215
            + D   EC                A+   +N + N  +   N         N S   + 
Sbjct: 151 RITDYGAECL---------------AKTLRNNTTINTLDLRWN---------NISTKGTQ 186

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           Q   +L     L  LDLS NA    G + LAD L+++    LE L L +N +G  G + L
Sbjct: 187 QLAEALPHNTTLTNLDLSWNAIDDQGAQSLADALQNNTI--LETLNLASNRIGGHGAQQL 244

Query: 276 --SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
             S+  HD             L  F    N + ++G K+LA   K  K++  +++  N I
Sbjct: 245 VASRQNHDI------------LTTFNLSSNHIGHDGMKLLADALKTNKSIVTLDLASNRI 292

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G+  L  A + N  L  LNL+ N I   G   L QA+    +L +++L    +   G
Sbjct: 293 GDDGVQHLIVALKNNTTLTTLNLSSNQIRTSGIAYLSQAIEDTTALTVIDLSYNEIGITG 352

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           A  +A  +  N T+  + ++ N+I   G   +  A++N T +  I++S+NQ G+EG++ +
Sbjct: 353 AKDLATIILTNATITTLLVSNNQIGSSGIQYISYALQNNTTIISIDLSKNQIGDEGMKHL 412

Query: 454 EKLMK 458
              +K
Sbjct: 413 ANALK 417



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 13/233 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LV LDL  NA G  G++ L D+ + +    L  L L  NG+G+ G + L+ A  +     
Sbjct: 689 LVTLDLGSNAIGTEGIQYLVDVFQDNKT--LSALDLGTNGIGVDGAQHLANAFRN----- 741

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
                 + L       N +  EG + L+ +F+  KTL  +++  NGI   G   L++AF 
Sbjct: 742 -----NVTLTTLDLRGNEIGVEGVRHLSDMFRDNKTLTILDLRSNGIGDKGAQYLAEAFR 796

Query: 347 ENKNLRHLNLNDNTITYKGA-IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
            N  L  L+L  N I  KG    L  A     +L  L+L D  +   G   +A  L  N 
Sbjct: 797 NNNTLTTLHLGSNGIRAKGIRYLLLDAFQSNQTLTYLDLSDNKISLEGVKYLADGLRTNK 856

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           TL ++NL  N++ V+G   +  A+++   L  +++S N+ G EG + +   ++
Sbjct: 857 TLTNINLANNKVGVEGIQYIADALRSNVTLTMLDLSGNKMGVEGAQHLANAIR 909



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 156/391 (39%), Gaps = 59/391 (15%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           F   +TL  +++  NGI   G   L+DA   NK +  L+L  N I   G   L       
Sbjct: 633 FLPPQTLTTLDLAANGIGTEGARYLADAIRNNKTITSLDLKSNKIGSGGVRYLA------ 686

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            +L  L+LG   + + G   +     DN TL  ++L  N I V G   L  A +N   L 
Sbjct: 687 DTLVTLDLGSNAIGTEGIQYLVDVFQDNKTLSALDLGTNGIGVDGAQHLANAFRNNVTLT 746

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
            +++  N+ G EGV  +  + +       L L                     S+  GD 
Sbjct: 747 TLDLRGNEIGVEGVRHLSDMFRDNKTLTILDLR--------------------SNGIGDK 786

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM--SLKTGARLVELDLSDNAFGPIGVE 243
                 ++  ++N     H  SN       +  +  + ++   L  LDLSDN     GV+
Sbjct: 787 GAQYLAEAFRNNNTLTTLHLGSNGIRAKGIRYLLLDAFQSNQTLTYLDLSDNKISLEGVK 846

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
            LAD LR++    L  + L NN +G+ G + ++ AL           S + L +     N
Sbjct: 847 YLADGLRTNKT--LTNINLANNKVGVEGIQYIADALR----------SNVTLTMLDLSGN 894

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV-GITALSDAFEENKNLRHLNLNDNTIT 362
           ++  EGA+ LA     ++  E V    + I  +  I  L       K L  LNL DN I 
Sbjct: 895 KMGVEGAQHLA---NAIRNNEVVIFENSSILFIQNIVIL-------KTLIILNLADNRIG 944

Query: 363 YKGAIPLGQALSK-----LPSLAILNLGDCL 388
            +G   LG AL         S+ ILN   CL
Sbjct: 945 DQGVQYLGDALQNNTVIIFVSILILN---CL 972



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 43/266 (16%)

Query: 237  FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
             G  G   LAD  R +    L  L L +N +G  G +        C+  + +    L   
Sbjct: 1141 IGSEGARYLADAFRHNAT--LTTLDLRSNSIGTEGAR--------CFADAFRNNMTLTSL 1190

Query: 297  VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI----------YHV---------- 336
             F    N++ NEGA+ L  +F+      R  M    I          YH+          
Sbjct: 1191 DF--SSNKISNEGAQYLVDIFRDQTEWNRYLMHFEKIKYILLYLAYCYHMSTSVTQTLVV 1248

Query: 337  -----------GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
                       G+  L+DA   ++ +  ++L+DN+I  +G   L   L     L  L+L 
Sbjct: 1249 LDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLTKLDLS 1308

Query: 386  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
              L+ + GA  +++ + +NTT+  +NL  NEI  +G   L  A +N   L  IN+  N  
Sbjct: 1309 FNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGI 1368

Query: 446  GEEGVEEMEKLMKSFGMAAALVLEDD 471
            G++G + +   ++S  +   L L D+
Sbjct: 1369 GDKGAQYLTNALQSNKILTNLDLSDN 1394



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 126/554 (22%), Positives = 206/554 (37%), Gaps = 147/554 (26%)

Query: 2    LAAVFKKLKTLEHVEMPQNGI-----YHV-----------------------GITALSDA 33
            L  VF+  KTL  +++  NGI      H+                       G+  LSD 
Sbjct: 707  LVDVFQDNKTLSALDLGTNGIGVDGAQHLANAFRNNVTLTTLDLRGNEIGVEGVRHLSDM 766

Query: 34   FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL--- 90
            F +NK L  L+L  N I  KGA  L +A     +L  L+LG   +++ G     +YL   
Sbjct: 767  FRDNKTLTILDLRSNGIGDKGAQYLAEAFRNNNTLTTLHLGSNGIRAKG----IRYLLLD 822

Query: 91   --TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
                N TL  ++L+ N+IS++G   L   ++    L  IN++ N+ G EG++ +   ++S
Sbjct: 823  AFQSNQTLTYLDLSDNKISLEGVKYLADGLRTNKTLTNINLANNKVGVEGIQYIADALRS 882

Query: 149  FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
                  L + D  G              N    EG            + + +N   NN  
Sbjct: 883  ---NVTLTMLDLSG--------------NKMGVEG------------AQHLANAIRNNEV 913

Query: 209  QSHNTSN----QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
                 S+    Q+ + LKT   L+ L+L+DN  G  GV+ L D L+++       + + N
Sbjct: 914  VIFENSSILFIQNIVILKT---LIILNLADNRIGDQGVQYLGDALQNNTVIIFVSILILN 970

Query: 265  NGLGITGCKLLSKALHDCYESSKKEGSPLAL----------KVFIAGRNRLENEGAKMLA 314
                   C        D Y  SK     + +          KV++   +    E  ++  
Sbjct: 971  -------CL-------DLYSFSKSYVFFILIFHSIHIKVLTKVYLQRSDMNNKETQRVSD 1016

Query: 315  AVFKKLKTLERVEMPQNGIYHVGITALSD----------------------AFEENKNLR 352
            A+   ++TL    +P   +       ++D                      AF +N+ L 
Sbjct: 1017 ALRAHIQTLPAQNVPVTEVLTDVSKTIADNMTKLCLRDLKMGPEECRHLAAAFRDNQTLT 1076

Query: 353  HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK------------- 399
             L+L  N I  +GA  +  A     +L  L LG   +   GA  +AK             
Sbjct: 1077 TLDLTFNAIGPEGAQHIANAFQDNKTLTTLLLGSNRIADEGARHLAKSFRTNTTLTTLDL 1136

Query: 400  -----------YLTD----NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
                       YL D    N TL  ++L  N I  +G      A +N   L  ++ S N+
Sbjct: 1137 TLNGIGSEGARYLADAFRHNATLTTLDLRSNSIGTEGARCFADAFRNNMTLTSLDFSSNK 1196

Query: 445  FGEEGVEEMEKLMK 458
               EG + +  + +
Sbjct: 1197 ISNEGAQYLVDIFR 1210



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 27/262 (10%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            + +  A L  LDL  N+ G  G    AD  R++    L  L  ++N +   G + L    
Sbjct: 1152 AFRHNATLTTLDLRSNSIGTEGARCFADAFRNNMT--LTSLDFSSNKISNEGAQYLVDIF 1209

Query: 280  HD-----------------------CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
             D                       CY  S      L   V     + + + G + LA  
Sbjct: 1210 RDQTEWNRYLMHFEKIKYILLYLAYCYHMSTSVTQTLV--VLDLQSDEIGDNGVQYLADA 1267

Query: 317  FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
             +  +T+  +++  N I   GI  L++   +N  L  L+L+ N I  +GA  L + + + 
Sbjct: 1268 IRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLTKLDLSFNLIGAEGARYLSETIREN 1327

Query: 377  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
             ++  LNL    + + GA  +A    +N TL  +NL  N I  +G   L  A+++   L 
Sbjct: 1328 TTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQSNKILT 1387

Query: 437  QINVSENQFGEEGVEEMEKLMK 458
             +++S+N  G+ GV  +   ++
Sbjct: 1388 NLDLSDNGIGDRGVHLLTTALR 1409



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 12/196 (6%)

Query: 218  HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
            HMS      LV LDL  +  G  GV+ LAD +R+     +  + L++N +G  G + L+ 
Sbjct: 1237 HMSTSVTQTLVVLDLQSDEIGDNGVQYLADAIRNHQT--ITTIDLSDNSIGAEGIQHLAN 1294

Query: 278  ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
             L D    +K + S           N +  EGA+ L+   ++  T+  + +  N I   G
Sbjct: 1295 VLRDNTMLTKLDLSF----------NLIGAEGARYLSETIRENTTITSLNLHSNEIGTEG 1344

Query: 338  ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
               L+DAF  NK L  +NL  N I  KGA  L  AL     L  L+L D  +   G   +
Sbjct: 1345 AQYLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQSNKILTNLDLSDNGIGDRGVHLL 1404

Query: 398  AKYLTDNTTLEDVNLT 413
               L DN  + +   T
Sbjct: 1405 TTALRDNKVIIEFYFT 1420



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 108/273 (39%), Gaps = 43/273 (15%)

Query: 227  LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
            + +L L D   GP     LA   R +    L  L L  N +G  G + ++ A  D     
Sbjct: 1047 MTKLCLRDLKMGPEECRHLAAAFRDNQT--LTTLDLTFNAIGPEGAQHIANAFQDNK--- 1101

Query: 287  KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
                    L   + G NR+ +EGA+ LA  F+   TL  +++  NGI   G   L+DAF 
Sbjct: 1102 -------TLTTLLLGSNRIADEGARHLAKSFRTNTTLTTLDLTLNGIGSEGARYLADAFR 1154

Query: 347  ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT- 405
             N  L  L+L  N+I  +GA     A     +L  L+     + + GA  +     D T 
Sbjct: 1155 HNATLTTLDLRSNSIGTEGARCFADAFRNNMTLTSLDFSSNKISNEGAQYLVDIFRDQTE 1214

Query: 406  ------------------------------TLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
                                          TL  ++L  +EI   G   L  A++N   +
Sbjct: 1215 WNRYLMHFEKIKYILLYLAYCYHMSTSVTQTLVVLDLQSDEIGDNGVQYLADAIRNHQTI 1274

Query: 436  KQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
              I++S+N  G EG++ +  +++   M   L L
Sbjct: 1275 TTIDLSDNSIGAEGIQHLANVLRDNTMLTKLDL 1307



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 78/151 (51%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  +++  + I   G+  L+DA   ++ +  ++L+DN+I  +G   L   L     L 
Sbjct: 1244 QTLVVLDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLT 1303

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L   L+ + GA  +++ + +NTT+  +NL  NEI  +G   L  A +N   L  IN+
Sbjct: 1304 KLDLSFNLIGAEGARYLSETIRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINL 1363

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
              N  G++G + +   ++S  +   L L D+
Sbjct: 1364 RSNGIGDKGAQYLTNALQSNKILTNLDLSDN 1394



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 105/481 (21%), Positives = 196/481 (40%), Gaps = 66/481 (13%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L    +  N I H G+  L+DA + NK +  L+L  N I   G   L  AL    +L  L
Sbjct: 254 LTTFNLSSNHIGHDGMKLLADALKTNKSIVTLDLASNRIGDDGVQHLIVALKNNTTLTTL 313

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK--------------- 116
           NL    ++++G + +++ + D T L  ++L+ NEI + G  DL                 
Sbjct: 314 NLSSNQIRTSGIAYLSQAIEDTTALTVIDLSYNEIGITGAKDLATIILTNATITTLLVSN 373

Query: 117 -------------AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGE 163
                        A++N T +  I++S+NQ G+EG++ +   +K       + L      
Sbjct: 374 NQIGSSGIQYISYALQNNTTIISIDLSKNQIGDEGMKHLANALKHNTTITTIDLS----- 428

Query: 164 CSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKT 223
              + Q  +   E+  +    N+ L++         SN+  +    S  +S Q H  +  
Sbjct: 429 ---QNQITDKGIEHLGNVLKFNTTLTNISL-----VSNKITDKGADSLASSIQQHKIM-- 478

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
              + EL+L+ N  G  G   LA+ L+      L +L+L  N +     + LS A     
Sbjct: 479 ---INELNLAHNLIGDQGARSLANYLQYQTT--LTKLELIGNPITSNASRYLSDAF---- 529

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
              +   + ++L + ++   +++ E  + +   ++   T   +++  +GI   G   L+ 
Sbjct: 530 ---RHNTTLVSLNLSLS---QIDEEERQTVTNAYRSNSTFTSLDLEHSGIGRTGAQILT- 582

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
                  L +LNL  N IT K    L +AL         +       S+    I  +L  
Sbjct: 583 ------TLSNLNLRHNKITGKAIQHLSEALRTGTVNEYFSHYFSFHVSSNIDWIQNFLPP 636

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 463
             TL  ++L  N I  +G   L  A++N   +  +++  N+ G  GV  +   + +  + 
Sbjct: 637 Q-TLTTLDLAANGIGTEGARYLADAIRNNKTITSLDLKSNKIGSGGVRYLADTLVTLDLG 695

Query: 464 A 464
           +
Sbjct: 696 S 696



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 73/146 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   +  +T+  +++  N I   GI  L++   +N  L  L+L+ N I  +GA  L + 
Sbjct: 1264 LADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNTMLTKLDLSFNLIGAEGARYLSET 1323

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            + +  ++  LNL    + + GA  +A    +N TL  +NL  N I  +G   L  A+++ 
Sbjct: 1324 IRENTTITSLNLHSNEIGTEGAQYLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQSN 1383

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMK 147
              L  +++S+N  G+ GV  +   ++
Sbjct: 1384 KILTNLDLSDNGIGDRGVHLLTTALR 1409



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 119/313 (38%), Gaps = 56/313 (17%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA  F+   TL  +++  NGI   G   L+DAF  N  L  L+L  N+I  +GA     A
Sbjct: 1121 LAKSFRTNTTLTTLDLTLNGIGSEGARYLADAFRHNATLTTLDLRSNSIGTEGARCFADA 1180

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--------------------------- 94
                 +L  L+     + + GA  +     D T                           
Sbjct: 1181 FRNNMTLTSLDFSSNKISNEGAQYLVDIFRDQTEWNRYLMHFEKIKYILLYLAYCYHMST 1240

Query: 95   ----TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 150
                TL  ++L  +EI   G   L  A++N   +  I++S+N  G EG++ +  +++   
Sbjct: 1241 SVTQTLVVLDLQSDEIGDNGVQYLADAIRNHQTITTIDLSDNSIGAEGIQHLANVLRDNT 1300

Query: 151  MAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQS 210
            M   L L  +           E+  EN +       NL  N+                  
Sbjct: 1301 MLTKLDLSFNLIGAEGARYLSETIRENTTITS---LNLHSNEI----------------- 1340

Query: 211  HNTSNQSHM--SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
              T    ++  + +    L  ++L  N  G  G + L + L+S+    L  L L++NG+G
Sbjct: 1341 -GTEGAQYLADAFRNNKTLTTINLRSNGIGDKGAQYLTNALQSNKI--LTNLDLSDNGIG 1397

Query: 269  ITGCKLLSKALHD 281
              G  LL+ AL D
Sbjct: 1398 DRGVHLLTTALRD 1410


>gi|169858009|ref|XP_001835651.1| ran GTPase activating protein 1 [Coprinopsis cinerea okayama7#130]
 gi|116503327|gb|EAU86222.1| ran GTPase activating protein 1 [Coprinopsis cinerea okayama7#130]
          Length = 399

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 96/171 (56%), Gaps = 6/171 (3%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVE+DLSDNAFG   V+ +  LL  +  F +  LKLNNNGLG  G  +++ AL +  + S
Sbjct: 94  LVEIDLSDNAFGGRSVDPMVPLLSKNRHFQI--LKLNNNGLGPAGGAVIANALLESAKLS 151

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           K  G    L+  I GRNRLEN  A   A  F + + L  V MPQNGI   GI  LS    
Sbjct: 152 KAAGLKSNLRTVICGRNRLENGSASAWADAFAEHEGLVEVRMPQNGIRMEGILELSRGLA 211

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK----LPSLAILNLGDCLLKSAG 393
           +N NL +++L DN  + +G +   +A +K     P L  LNL DC+L + G
Sbjct: 212 KNPNLGYIDLQDNAFSTEGQLDAIEAWTKAMVSWPELHTLNLSDCILSTEG 262



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A  F + + L  V MPQNGI   GI  LS    +N  L +++L DN  + +G +   +A
Sbjct: 178 WADAFAEHEGLVEVRMPQNGIRMEGILELSRGLAKNPNLGYIDLQDNAFSTEGQLDAIEA 237

Query: 62  LSK----LPSLAILNLGDCLLKSAG 82
            +K     P L  LNL DC+L + G
Sbjct: 238 WTKAMVSWPELHTLNLSDCILSTEG 262


>gi|19115745|ref|NP_594833.1| Ran GAP Rna1 [Schizosaccharomyces pombe 972h-]
 gi|1173091|sp|P41391.1|RNA1_SCHPO RecName: Full=Ran GTPase-activating protein 1; Short=Protein rna1
 gi|394746|emb|CAA49509.1| rna1p [Schizosaccharomyces pombe]
 gi|1220282|emb|CAA93894.1| Ran GAP Rna1 [Schizosaccharomyces pombe]
          Length = 386

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 127/246 (51%), Gaps = 17/246 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  + LSDNAFGP   E L D L       LE L L+NNGLG      +++AL +   +
Sbjct: 95  KLHTVRLSDNAFGPTAQEPLIDFLSKHT--PLEHLYLHNNGLGPQAGAKIARALQELAVN 152

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
            K + +P  L+  I GRNRLEN   K  A  F+  + L  V+M QNGI   GI   L + 
Sbjct: 153 KKAKNAP-PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEG 211

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
               + L+ L+L DNT T+ G+  L  AL   P+L  L L DCLL + GA+++    +  
Sbjct: 212 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-----INVSENQFGEEG--VEEMEK 455
           +N  L+ + L  NEI     LD V+ +K     K      + ++ N+F EE   V+E+ +
Sbjct: 272 ENIGLQTLRLQYNEIE----LDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIRE 327

Query: 456 LMKSFG 461
           +  + G
Sbjct: 328 VFSTRG 333



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 14/159 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F+  + L  V+M QNGI   GI   L +     ++L+ L+L DNT T+ G+  L  
Sbjct: 179 WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           AL   P+L  L L DCLL + GA+++    +  +N  L+ + L  NEI     LD V+ +
Sbjct: 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE----LDAVRTL 294

Query: 119 KNKTKLKQ-----INVSENQFGEEG--VEEMEKLMKSFG 150
           K     K      + ++ N+F EE   V+E+ ++  + G
Sbjct: 295 KTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRG 333


>gi|7546365|pdb|1YRG|A Chain A, The Crystal Structure Of Rna1p: A New Fold For A Gtpase-
           Activating Protein
 gi|7546366|pdb|1YRG|B Chain B, The Crystal Structure Of Rna1p: A New Fold For A Gtpase-
           Activating Protein
          Length = 385

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 127/246 (51%), Gaps = 17/246 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  + LSDNAFGP   E L D L       LE L L+NNGLG      +++AL +   +
Sbjct: 94  KLHTVRLSDNAFGPTAQEPLIDFLSKHT--PLEHLYLHNNGLGPQAGAKIARALQELAVN 151

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
            K + +P  L+  I GRNRLEN   K  A  F+  + L  V+M QNGI   GI   L + 
Sbjct: 152 KKAKNAP-PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEG 210

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
               + L+ L+L DNT T+ G+  L  AL   P+L  L L DCLL + GA+++    +  
Sbjct: 211 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 270

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-----INVSENQFGEEG--VEEMEK 455
           +N  L+ + L  NEI     LD V+ +K     K      + ++ N+F EE   V+E+ +
Sbjct: 271 ENIGLQTLRLQYNEIE----LDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIRE 326

Query: 456 LMKSFG 461
           +  + G
Sbjct: 327 VFSTRG 332



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 14/159 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F+  + L  V+M QNGI   GI   L +     ++L+ L+L DNT T+ G+  L  
Sbjct: 178 WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 237

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           AL   P+L  L L DCLL + GA+++    +  +N  L+ + L  NEI     LD V+ +
Sbjct: 238 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE----LDAVRTL 293

Query: 119 KNKTKLKQ-----INVSENQFGEEG--VEEMEKLMKSFG 150
           K     K      + ++ N+F EE   V+E+ ++  + G
Sbjct: 294 KTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRG 332


>gi|20150667|pdb|1K5D|C Chain C, Crystal Structure Of Ran-Gppnhp-Ranbp1-Rangap Complex
 gi|20150670|pdb|1K5D|F Chain F, Crystal Structure Of Ran-Gppnhp-Ranbp1-Rangap Complex
 gi|20150673|pdb|1K5D|I Chain I, Crystal Structure Of Ran-Gppnhp-Ranbp1-Rangap Complex
 gi|20150676|pdb|1K5D|L Chain L, Crystal Structure Of Ran-Gppnhp-Ranbp1-Rangap Complex
 gi|20150679|pdb|1K5G|C Chain C, Crystal Structure Of Ran-Gdp-Alfx-Ranbp1-Rangap Complex
 gi|20150682|pdb|1K5G|F Chain F, Crystal Structure Of Ran-Gdp-Alfx-Ranbp1-Rangap Complex
 gi|20150685|pdb|1K5G|I Chain I, Crystal Structure Of Ran-Gdp-Alfx-Ranbp1-Rangap Complex
 gi|20150688|pdb|1K5G|L Chain L, Crystal Structure Of Ran-Gdp-Alfx-Ranbp1-Rangap Complex
 gi|88192648|pdb|2CA6|A Chain A, Miras Structure Determination From Hemihedrally Twinned
           Crystals
 gi|88192649|pdb|2CA6|B Chain B, Miras Structure Determination From Hemihedrally Twinned
           Crystals
          Length = 386

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 127/246 (51%), Gaps = 17/246 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  + LSDNAFGP   E L D L       LE L L+NNGLG      +++AL +   +
Sbjct: 95  KLHTVRLSDNAFGPTAQEPLIDFLSKHT--PLEHLYLHNNGLGPQAGAKIARALQELAVN 152

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
            K + +P  L+  I GRNRLEN   K  A  F+  + L  V+M QNGI   GI   L + 
Sbjct: 153 KKAKNAP-PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEG 211

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
               + L+ L+L DNT T+ G+  L  AL   P+L  L L DCLL + GA+++    +  
Sbjct: 212 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-----INVSENQFGEEG--VEEMEK 455
           +N  L+ + L  NEI     LD V+ +K     K      + ++ N+F EE   V+E+ +
Sbjct: 272 ENIGLQTLRLQYNEIE----LDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIRE 327

Query: 456 LMKSFG 461
           +  + G
Sbjct: 328 VFSTRG 333



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 14/159 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F+  + L  V+M QNGI   GI   L +     ++L+ L+L DNT T+ G+  L  
Sbjct: 179 WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           AL   P+L  L L DCLL + GA+++    +  +N  L+ + L  NEI     LD V+ +
Sbjct: 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE----LDAVRTL 294

Query: 119 KNKTKLKQ-----INVSENQFGEEG--VEEMEKLMKSFG 150
           K     K      + ++ N+F EE   V+E+ ++  + G
Sbjct: 295 KTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRG 333


>gi|330842768|ref|XP_003293343.1| hypothetical protein DICPUDRAFT_158160 [Dictyostelium purpureum]
 gi|325076341|gb|EGC30135.1| hypothetical protein DICPUDRAFT_158160 [Dictyostelium purpureum]
          Length = 619

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 228/465 (49%), Gaps = 31/465 (6%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K+K+L  +++  N   +  I  L+DA + NK + +LNL +N +  KG   +  AL K  S
Sbjct: 102 KIKSLTTIDLKNNSATNYVIDRLADALKTNKSVTYLNLYNNRLMQKGGTVIANALKKNQS 161

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           +  L+LG  LL + G ++IA  L  N TL +++L+ N++ ++G   +V+A+K    +K +
Sbjct: 162 ITHLDLGLNLLGANGGTAIADALKVNNTLVNLDLSGNQLGLRGAGPIVEALKVNKSIKYL 221

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE----GECSDEEQDEESEE----ENDS 179
            +S NQ  +E    +  +++       L L D+E    G  +  +  + S+     E   
Sbjct: 222 YLSSNQLRDECSLPLADILRQNMGFVELALNDNEIGAKGGIALAKMLKTSKVLTKLEFGK 281

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFG 238
           +  GD+  ++  D+   +        N N+    + ++   +LK+   + +LDLS N FG
Sbjct: 282 NELGDDGGIAMADAIKFNKLICVVRLNWNKLGVKAIKALSDALKSNTSVYQLDLSFNNFG 341

Query: 239 PIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF 298
             G++ L+D L+ +   ++  L L+    G+ G K L+ +L               +  F
Sbjct: 342 DEGLQCLSDSLKVNK--SIRTLDLSRVASGVVGHKALADSLR--------------INSF 385

Query: 299 IAGRN----RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           I   +    R+ NEG   LA      K++  + +  N      + AL+   E+N  L  L
Sbjct: 386 IQSLDLTNCRITNEGGIELANSLVDNKSISTLVLNNNTFSKDTVVALAKTLEKNSTLTSL 445

Query: 355 NLNDNTITYKGAIPLGQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           +L +N++T  G   L ++LS    +L  ++L + LL S G  +I+KY+    ++ ++ LT
Sbjct: 446 SLVNNSLTIDGVEDLFKSLSTSNKTLIKIDLTNNLLGSQGGETISKYIPK-CSISELILT 504

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            N++  QG   ++ A+   + ++ +++S N  G + VE +  ++K
Sbjct: 505 NNQLETQGASSILNAVATNSSIQTLDISNNSIGSDVVEPLCSVLK 549



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 86/154 (55%)

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
           K+K+L  +++  N   +  I  L+DA + NK++ +LNL +N +  KG   +  AL K  S
Sbjct: 102 KIKSLTTIDLKNNSATNYVIDRLADALKTNKSVTYLNLYNNRLMQKGGTVIANALKKNQS 161

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           +  L+LG  LL + G ++IA  L  N TL +++L+ N++ ++G   +V+A+K    +K +
Sbjct: 162 ITHLDLGLNLLGANGGTAIADALKVNNTLVNLDLSGNQLGLRGAGPIVEALKVNKSIKYL 221

Query: 439 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            +S NQ  +E    +  +++       L L D+E
Sbjct: 222 YLSSNQLRDECSLPLADILRQNMGFVELALNDNE 255



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 12/233 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DL +N+     ++ LAD L+++   ++  L L NN L   G  +++ AL       
Sbjct: 106 LTTIDLKNNSATNYVIDRLADALKTNK--SVTYLNLYNNRLMQKGGTVIANAL------- 156

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           KK  S   L +   G N L   G   +A   K   TL  +++  N +   G   + +A +
Sbjct: 157 KKNQSITHLDL---GLNLLGANGGTAIADALKVNNTLVNLDLSGNQLGLRGAGPIVEALK 213

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            NK++++L L+ N +  + ++PL   L +      L L D  + + G  ++AK L  +  
Sbjct: 214 VNKSIKYLYLSSNQLRDECSLPLADILRQNMGFVELALNDNEIGAKGGIALAKMLKTSKV 273

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L  +    NE+   GG+ +  A+K    +  + ++ N+ G + ++ +   +KS
Sbjct: 274 LTKLEFGKNELGDDGGIAMADAIKFNKLICVVRLNWNKLGVKAIKALSDALKS 326


>gi|320166877|gb|EFW43776.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1057

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 208/467 (44%), Gaps = 29/467 (6%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L H+++  N I   G  A+++  + +  L  LN+  N I   GA  +G +     +L I
Sbjct: 104 SLAHLDLSNNKIGDAGARAIAEGLQTSTGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCI 163

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L +  +  AGA +IA+ L  +T L  +N+  N+I   G   +  + +NK  LK + + 
Sbjct: 164 LDLRNNKIGDAGARAIAEGLQTSTGLLSLNMYGNQIGNAGAQAIGSSFRNKAALKILQLG 223

Query: 131 ENQFGEEGVEEMEK-LMKSFGMAAALVLEDDEGECSDEE-------QDEESEEENDSDAE 182
            N+ G+ G   +   L KS  +    +  +  G+   +        +   SE   +++  
Sbjct: 224 SNKIGDVGARAIAAGLRKSAALIYCCMQANQIGDAGAQAIGFALRNKANLSELSLEANKI 283

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIG 241
           GD    +  +      +  Q    +N   +   Q+   +L+  A+L  L LS+N  G  G
Sbjct: 284 GDAGACAIAEGLQMSTSLTQLRMQTNYIGDAGAQAIGYALRNKAKLSVLYLSENRIGDAG 343

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH----------------DCYES 285
              +A+ L +S   +L + K+  N +G  G + +  AL                 D   S
Sbjct: 344 ARAVAEGLHTST--SLTDFKMQANYIGNAGAQAIGSALRKTANLSLLSLTNNKIGDTGAS 401

Query: 286 SKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           +  EG  +  AL       N++ +EGA+ + +  +    L  +++ +N I   G +A+++
Sbjct: 402 AIAEGLQASTALTQLGMHANQIGDEGAQAIGSALRNKPNLSLLDLAKNKIGDTGASAIAE 461

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             + +  L    +N+N I   GA  +G AL     LAI++LG   +  AGA +IA  L  
Sbjct: 462 GLQGSTALTRFGMNNNQIGNVGAQAIGSALRNKADLAIVHLGSNKIGDAGACAIADGLRS 521

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           +T L  + +  N I   G   +  A++NK  L  + +  N+ G+ G 
Sbjct: 522 STALLALGMHANHIGDTGAQAIGSALRNKANLSVLLMGSNKIGDAGA 568



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 203/472 (43%), Gaps = 75/472 (15%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           F+    L+ +++  N I  VG  A++    ++  L +  +  N I   GA  +G AL   
Sbjct: 211 FRNKAALKILQLGSNKIGDVGARAIAAGLRKSAALIYCCMQANQIGDAGAQAIGFALRNK 270

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            +L+ L+L    +  AGA +IA+ L  +T+L  + +  N I   G   +  A++NK KL 
Sbjct: 271 ANLSELSLEANKIGDAGACAIAEGLQMSTSLTQLRMQTNYIGDAGAQAIGYALRNKAKLS 330

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
            + +SEN+ G+ G   +                                      AEG +
Sbjct: 331 VLYLSENRIGDAGARAV--------------------------------------AEGLH 352

Query: 186 SNLSHND----SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
           ++ S  D    +N+  NA  Q+  ++             L+  A L  L L++N  G  G
Sbjct: 353 TSTSLTDFKMQANYIGNAGAQAIGSA-------------LRKTANLSLLSLTNNKIGDTG 399

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH----------------DCYES 285
              +A+ L++S   AL +L ++ N +G  G + +  AL                 D   S
Sbjct: 400 ASAIAEGLQAST--ALTQLGMHANQIGDEGAQAIGSALRNKPNLSLLDLAKNKIGDTGAS 457

Query: 286 SKKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           +  EG     AL  F    N++ N GA+ + +  +    L  V +  N I   G  A++D
Sbjct: 458 AIAEGLQGSTALTRFGMNNNQIGNVGAQAIGSALRNKADLAIVHLGSNKIGDAGACAIAD 517

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
               +  L  L ++ N I   GA  +G AL    +L++L +G   +  AGA +IA+ L  
Sbjct: 518 GLRSSTALLALGMHANHIGDTGAQAIGSALRNKANLSVLLMGSNKIGDAGACAIAEGLQT 577

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           +T L D  +  N+I   G L +  +++NK +L  +++S NQ     V+ + +
Sbjct: 578 STALTDFKMHINQIGDAGALAIESSLRNKPQLAILHLSRNQISASAVQRLSQ 629



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 209/472 (44%), Gaps = 50/472 (10%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           +++  +EN  L+ L+L DN I   GA  +G AL    SLA L++ D  +  AGA +IA+ 
Sbjct: 14  IAEGLKENSILQRLDLCDNQIGDAGAQAIGSALRNKLSLAHLDMNDNKISDAGACAIAEG 73

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKS 148
           LT +T L+   +  N+I   G   +  A++NK  L  +++S N+ G+ G   + E L  S
Sbjct: 74  LTTSTALK---IDTNQIGDAGAQAIGSALRNKLSLAHLDLSNNKIGDAGARAIAEGLQTS 130

Query: 149 FGMAAALVLEDDEGECSDEE-------------QDEESEEENDSDAEGDNSNLSHNDSNH 195
            G+ +  +  +  G    +               D  + +  D+ A      L  +    
Sbjct: 131 TGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCILDLRNNKIGDAGARAIAEGLQTSTGLL 190

Query: 196 SHNA-SNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS-- 252
           S N   NQ  N   Q+  +S ++  +LK       L L  N  G +G   +A  LR S  
Sbjct: 191 SLNMYGNQIGNAGAQAIGSSFRNKAALKI------LQLGSNKIGDVGARAIAAGLRKSAA 244

Query: 253 ---CCFALEELKLNNNGLGITGCKLLSKA-----------LHDCYESSKKEGSPL--ALK 296
              CC  ++  ++ + G    G  L +KA           + D    +  EG  +  +L 
Sbjct: 245 LIYCC--MQANQIGDAGAQAIGFALRNKANLSELSLEANKIGDAGACAIAEGLQMSTSLT 302

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
                 N + + GA+ +    +    L  + + +N I   G  A+++    + +L    +
Sbjct: 303 QLRMQTNYIGDAGAQAIGYALRNKAKLSVLYLSENRIGDAGARAVAEGLHTSTSLTDFKM 362

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             N I   GA  +G AL K  +L++L+L +  +   GAS+IA+ L  +T L  + +  N+
Sbjct: 363 QANYIGNAGAQAIGSALRKTANLSLLSLTNNKIGDTGASAIAEGLQASTALTQLGMHANQ 422

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK------LMKSFGM 462
           I  +G   +  A++NK  L  +++++N+ G+ G   + +       +  FGM
Sbjct: 423 IGDEGAQAIGSALRNKPNLSLLDLAKNKIGDTGASAIAEGLQGSTALTRFGM 474



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 204/476 (42%), Gaps = 43/476 (9%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+ + L T   +++  N I   G  A+  A      L HL+L++N I   GA  + + L 
Sbjct: 69  AIAEGLTTSTALKIDTNQIGDAGAQAIGSALRNKLSLAHLDLSNNKIGDAGARAIAEGLQ 128

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
               L  LN+    + +AGA +I     +   L  ++L  N+I   G   + + ++  T 
Sbjct: 129 TSTGLLSLNIYGNQIGNAGAQAIGSSFRNKANLCILDLRNNKIGDAGARAIAEGLQTSTG 188

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEGECSDEEQDEESEEENDSDAE 182
           L  +N+  NQ G  G + +     SF   AAL +L+              S +  D  A 
Sbjct: 189 LLSLNMYGNQIGNAGAQAIG---SSFRNKAALKILQ------------LGSNKIGDVGAR 233

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIG 241
              + L  +       A       +NQ  +   Q+   +L+  A L EL L  N  G  G
Sbjct: 234 AIAAGLRKSA------ALIYCCMQANQIGDAGAQAIGFALRNKANLSELSLEANKIGDAG 287

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD------CYESSKKEGSPLAL 295
              +A+ L+ S   +L +L++  N +G  G + +  AL +       Y S  + G   A 
Sbjct: 288 ACAIAEGLQMST--SLTQLRMQTNYIGDAGAQAIGYALRNKAKLSVLYLSENRIGDAGAR 345

Query: 296 KV------------FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            V            F    N + N GA+ + +  +K   L  + +  N I   G +A+++
Sbjct: 346 AVAEGLHTSTSLTDFKMQANYIGNAGAQAIGSALRKTANLSLLSLTNNKIGDTGASAIAE 405

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             + +  L  L ++ N I  +GA  +G AL   P+L++L+L    +   GAS+IA+ L  
Sbjct: 406 GLQASTALTQLGMHANQIGDEGAQAIGSALRNKPNLSLLDLAKNKIGDTGASAIAEGLQG 465

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +T L    +  N+I   G   +  A++NK  L  +++  N+ G+ G   +   ++S
Sbjct: 466 STALTRFGMNNNQIGNVGAQAIGSALRNKADLAIVHLGSNKIGDAGACAIADGLRS 521



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 74/147 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +  +K   L  + +  N I   G +A+++  + +  L  L ++ N I  +GA  +G A
Sbjct: 375 IGSALRKTANLSLLSLTNNKIGDTGASAIAEGLQASTALTQLGMHANQIGDEGAQAIGSA 434

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   P+L++L+L    +   GAS+IA+ L  +T L    +  N+I   G   +  A++NK
Sbjct: 435 LRNKPNLSLLDLAKNKIGDTGASAIAEGLQGSTALTRFGMNNNQIGNVGAQAIGSALRNK 494

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
             L  +++  N+ G+ G   +   ++S
Sbjct: 495 ADLAIVHLGSNKIGDAGACAIADGLRS 521



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +  +    L  +++ +N I   G +A+++  + +  L    +N+N I   GA  +G A
Sbjct: 431 IGSALRNKPNLSLLDLAKNKIGDTGASAIAEGLQGSTALTRFGMNNNQIGNVGAQAIGSA 490

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     LAI++LG   +  AGA +IA  L  +T L  + +  N I   G   +  A++NK
Sbjct: 491 LRNKADLAIVHLGSNKIGDAGACAIADGLRSSTALLALGMHANHIGDTGAQAIGSALRNK 550

Query: 122 TKLKQINVSENQFGEEGV 139
             L  + +  N+ G+ G 
Sbjct: 551 ANLSVLLMGSNKIGDAGA 568


>gi|320170281|gb|EFW47180.1| hypothetical protein CAOG_05124 [Capsaspora owczarzaki ATCC 30864]
          Length = 1377

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 197/428 (46%), Gaps = 63/428 (14%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A++ A + N  L  ++L+ N I   GA  + +AL    +L  L L    +  AGA +
Sbjct: 59  GAQAIAVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLRGNRVGDAGAQA 118

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA+ L  NTTL  + L  N+I   G   +  A+K  T L Q ++ +NQ G  G + +   
Sbjct: 119 IAEALKVNTTLTKLYLQYNQIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGAQAI--- 175

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
                                            +DA   N+ L+  D             
Sbjct: 176 ---------------------------------ADALKVNTKLTQFDLR----------- 191

Query: 206 NSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
             NQ  +   Q+   +LK    L +++L +N FG +G + +A+ L+ +    L +L  + 
Sbjct: 192 -GNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEALKVNTV--LTQLIFST 248

Query: 265 NGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
           N +G+ G   +++AL           +   +++ + G N++ + GA+ +A   K   TL 
Sbjct: 249 NSIGVAGTHAIAEALM---------VNTTLIQLDLPG-NQVGDVGARAIAEALKVNTTLT 298

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
           ++++  N I  VG  A+++A + N  L  L  + N+I   G   + +AL    +L  L+L
Sbjct: 299 QLDLRYNQIGDVGAQAIAEALKVNTALTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDL 358

Query: 385 GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
               +  AGA S+++ L  NTTL+++NL  N+I   G   + +A++  T L+ +N++EN+
Sbjct: 359 DSNRVGDAGARSVSEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENR 418

Query: 445 FG--EEGV 450
            G  EE V
Sbjct: 419 IGYVEETV 426



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 173/390 (44%), Gaps = 35/390 (8%)

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+    +   AGA +IA  L  NTTL  ++L  N+I   G   + +A+K  T L ++ + 
Sbjct: 48  LDFRFIMFGDAGAQAIAVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLR 107

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDE-GECSDEEQDEESEEENDSDAEGDNSNLS 189
            N+ G+ G + + + +K       L L+ ++ G             +  +DA   N+ L+
Sbjct: 108 GNRVGDAGAQAIAEALKVNTTLTKLYLQYNQIGHVG---------AQAIADALKVNTTLT 158

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADL 248
             D               NQ      Q+   +LK   +L + DL  N  G +G + +A+ 
Sbjct: 159 QFDLQ------------DNQIGRVGAQAIADALKVNTKLTQFDLRGNQVGDVGAQAIAEA 206

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L+ +    L ++ L+NN  G  G + +++AL        K  + L   +F    N +   
Sbjct: 207 LKVNTT--LTQVNLHNNKFGEVGAQAIAEAL--------KVNTVLTQLIF--STNSIGVA 254

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           G   +A       TL ++++P N +  VG  A+++A + N  L  L+L  N I   GA  
Sbjct: 255 GTHAIAEALMVNTTLIQLDLPGNQVGDVGARAIAEALKVNTTLTQLDLRYNQIGDVGAQA 314

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +AL    +L  L      +  AG  +IA+ L  NTTL  ++L  N +   G   + +A
Sbjct: 315 IAEALKVNTALTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLDSNRVGDAGARSVSEA 374

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +   T L+ +N+  NQ  + G   + + ++
Sbjct: 375 LLKNTTLQNLNLWLNQIKDAGARSISEALQ 404



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 177/417 (42%), Gaps = 61/417 (14%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  +++  N I  VG  A+++A + N  L  L L  N +   GA  + +A
Sbjct: 63  IAVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLRGNRVGDAGAQAIAEA 122

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    +   GA +IA  L  NTTL   +L  N+I   G   +  A+K  
Sbjct: 123 LKVNTTLTKLYLQYNQIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGAQAIADALKVN 182

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE-GECSDEEQDEESEEENDSD 180
           TKL Q ++  NQ G+ G + + + +K       + L +++ GE   +           + 
Sbjct: 183 TKLTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQ-----------AI 231

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
           AE    N        S N+   +      +H  +     +L     L++LDL  N  G +
Sbjct: 232 AEALKVNTVLTQLIFSTNSIGVAG-----THAIAE----ALMVNTTLIQLDLPGNQVGDV 282

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G   +A+ L+ +    L +L L  N +G  G + +++                ALKV  A
Sbjct: 283 GARAIAEALKVNTT--LTQLDLRYNQIGDVGAQAIAE----------------ALKVNTA 324

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
                                 L ++    N I   G  A+++A   N  L  L+L+ N 
Sbjct: 325 ----------------------LTQLIFSTNSIGVAGTQAIAEALMVNTTLIQLDLDSNR 362

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
           +   GA  + +AL K  +L  LNL    +K AGA SI++ L  NTTL+++NL  N I
Sbjct: 363 VGDAGARSVSEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRI 419



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 162/363 (44%), Gaps = 33/363 (9%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +  N +   G  A+++A + N  L  L L  N I + GA  +  A
Sbjct: 91  IAEALKVNTTLTKLYLRGNRVGDAGAQAIAEALKVNTTLTKLYLQYNQIGHVGAQAIADA 150

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L   +L D  +   GA +IA  L  NT L   +L  N++   G   + +A+K  
Sbjct: 151 LKVNTTLTQFDLQDNQIGRVGAQAIADALKVNTKLTQFDLRGNQVGDVGAQAIAEALKVN 210

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           T L Q+N+  N+FGE G + + + +K   +   L+   +    +      E+   N +  
Sbjct: 211 TTLTQVNLHNNKFGEVGAQAIAEALKVNTVLTQLIFSTNSIGVAGTHAIAEALMVNTTLI 270

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPI 240
           + D                       NQ  +   ++   +LK    L +LDL  N  G +
Sbjct: 271 QLDLPG--------------------NQVGDVGARAIAEALKVNTTLTQLDLRYNQIGDV 310

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G + +A+ L+ +   AL +L  + N +G+ G + +++AL           + + L +   
Sbjct: 311 GAQAIAEALKVNT--ALTQLIFSTNSIGVAGTQAIAEAL-------MVNTTLIQLDL--- 358

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
             NR+ + GA+ ++    K  TL+ + +  N I   G  ++S+A ++N  L++LNL +N 
Sbjct: 359 DSNRVGDAGARSVSEALLKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENR 418

Query: 361 ITY 363
           I Y
Sbjct: 419 IGY 421



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 111/230 (48%), Gaps = 13/230 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           ELD     FG  G + +A  L+ +    L ++ L+ N +G  G + +++AL        K
Sbjct: 47  ELDFRFIMFGDAGAQAIAVALKVNTT--LTKIDLHGNQIGEVGAQAIAEAL--------K 96

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             + L  K+++ G NR+ + GA+ +A   K   TL ++ +  N I HVG  A++DA + N
Sbjct: 97  VNTTLT-KLYLRG-NRVGDAGAQAIAEALKVNTTLTKLYLQYNQIGHVGAQAIADALKVN 154

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L   +L DN I   GA  +  AL     L   +L    +   GA +IA+ L  NTTL 
Sbjct: 155 TTLTQFDLQDNQIGRVGAQAIADALKVNTKLTQFDLRGNQVGDVGAQAIAEALKVNTTLT 214

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLM 457
            VNL  N+    G   + +A+K  T L Q+  S N  G  G   + E LM
Sbjct: 215 QVNLHNNKFGEVGAQAIAEALKVNTVLTQLIFSTNSIGVAGTHAIAEALM 264



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 35/342 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +  N I HVG  A++DA + N  L   +L DN I   GA  +  A
Sbjct: 119 IAEALKVNTTLTKLYLQYNQIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGAQAIADA 178

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L   +L    +   GA +IA+ L  NTTL  VNL  N+    G   + +A+K  
Sbjct: 179 LKVNTKLTQFDLRGNQVGDVGAQAIAEALKVNTTLTQVNLHNNKFGEVGAQAIAEALKVN 238

Query: 122 TKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           T L Q+  S N  G  G   + E LM    +   L+  D  G      Q  +      ++
Sbjct: 239 TVLTQLIFSTNSIGVAGTHAIAEALM----VNTTLIQLDLPGN-----QVGDVGARAIAE 289

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGP 239
           A   N+ L+  D  +            NQ  +   Q+   +LK    L +L  S N+ G 
Sbjct: 290 ALKVNTTLTQLDLRY------------NQIGDVGAQAIAEALKVNTALTQLIFSTNSIGV 337

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
            G + +A+ L  +    L +L L++N +G  G + +S+AL        K  +   L +++
Sbjct: 338 AGTQAIAEALMVNTT--LIQLDLDSNRVGDAGARSVSEAL-------LKNTTLQNLNLWL 388

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
              N++++ GA+ ++   +K  TL+ + + +N I +V  T L
Sbjct: 389 ---NQIKDAGARSISEALQKNTTLQNLNLAENRIGYVEETVL 427



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 267 LGITG---CKLLSKALHDCYESSKKEGSPLALKV----------FIAGRNRLENEGAKML 313
           +G+T    CK+   A+   YE+   E   L  KV          FI       + GA+ +
Sbjct: 8   VGVTNRIVCKVAQFAMSLSYEAMTPEQRKLYEKVKNASGELDFRFIM----FGDAGAQAI 63

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K   TL ++++  N I  VG  A+++A + N  L  L L  N +   GA  + +AL
Sbjct: 64  AVALKVNTTLTKIDLHGNQIGEVGAQAIAEALKVNTTLTKLYLRGNRVGDAGAQAIAEAL 123

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L  L L    +   GA +IA  L  NTTL   +L  N+I   G   +  A+K  T
Sbjct: 124 KVNTTLTKLYLQYNQIGHVGAQAIADALKVNTTLTQFDLQDNQIGRVGAQAIADALKVNT 183

Query: 434 KLKQINVSENQFGEEGVEEMEKLMK 458
           KL Q ++  NQ G+ G + + + +K
Sbjct: 184 KLTQFDLRGNQVGDVGAQAIAEALK 208


>gi|255726316|ref|XP_002548084.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240134008|gb|EER33563.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 414

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 127/236 (53%), Gaps = 9/236 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ +   L  +   ++E L L+NNG+G      +  +L    ++    
Sbjct: 110 INLSDNAFGLQTIDPIEAYL--AKAISIEHLILSNNGMGPFAGSRIGGSLFKLAQAKNSA 167

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDAFEEN 348
           G P +LK FI GRNRLEN     L+   +  K LE V + QNGI   GI+ L S     N
Sbjct: 168 GKP-SLKTFICGRNRLENGSVNYLSIGLRNHKDLEIVRLYQNGIRPAGISKLVSKGLSRN 226

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNT 405
           KNL+ L+L DNTIT +GA+ + ++LS  P L  LNL D LLK+ G+  + +      + +
Sbjct: 227 KNLKVLDLQDNTITTRGAVHIAESLSNWPELVELNLNDSLLKNKGSLKLVEAFHTGDEKS 286

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKSF 460
            L  + L  NE+       L  A+ +K   LK + ++ N+F EE  E ++K+ + F
Sbjct: 287 KLLTLKLQYNELETDSLRVLADAIASKLPNLKFLELNGNRF-EEDSEHIDKINEVF 341



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K LE V + QNGI   GI+ L S     NK L+ L+L DNTIT +GA+ + ++LS  P L
Sbjct: 198 KDLEIVRLYQNGIRPAGISKLVSKGLSRNKNLKVLDLQDNTITTRGAVHIAESLSNWPEL 257

Query: 69  AILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKL 124
             LNL D LLK+ G+  + +      + + L  + L  NE+       L  A+ +K   L
Sbjct: 258 VELNLNDSLLKNKGSLKLVEAFHTGDEKSKLLTLKLQYNELETDSLRVLADAIASKLPNL 317

Query: 125 KQINVSENQFGEEGVEEMEKLMKSF 149
           K + ++ N+F EE  E ++K+ + F
Sbjct: 318 KFLELNGNRF-EEDSEHIDKINEVF 341


>gi|302688821|ref|XP_003034090.1| hypothetical protein SCHCODRAFT_53132 [Schizophyllum commune H4-8]
 gi|300107785|gb|EFI99187.1| hypothetical protein SCHCODRAFT_53132 [Schizophyllum commune H4-8]
          Length = 404

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 99/171 (57%), Gaps = 6/171 (3%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVE++LSDNAFG   V+ +   L  +  F +  LKLNNNGLG  G ++++ AL    E S
Sbjct: 95  LVEINLSDNAFGGRSVDPMVPFLTQNRSFQV--LKLNNNGLGPAGGEIIANALLKSAELS 152

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           K EG P  L+V I GRNRLEN  A   AA F     LE V MPQNGI   GITAL++   
Sbjct: 153 KAEGKPSNLRVVICGRNRLENGSAPAWAAAFAAHGGLEEVRMPQNGIRMSGITALANGLA 212

Query: 347 ENKNLRHLNLNDNTITYKGAIP----LGQALSKLPSLAILNLGDCLLKSAG 393
           +N  L H++L DNT T +G +        AL   P+L  LNL DC+L   G
Sbjct: 213 KNAGLLHVDLQDNTFTEEGDLSGVAAWAAALKAWPALHTLNLSDCVLSGEG 263



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIP----LGQALSKLPS 67
           LE V MPQNGI   GITAL++   +N  L H++L DNT T +G +        AL   P+
Sbjct: 189 LEEVRMPQNGIRMSGITALANGLAKNAGLLHVDLQDNTFTEEGDLSGVAAWAAALKAWPA 248

Query: 68  LAILNLGDCLLKSAG 82
           L  LNL DC+L   G
Sbjct: 249 LHTLNLSDCVLSGEG 263


>gi|393218170|gb|EJD03658.1| Ran GTPase activator [Fomitiporia mediterranea MF3/22]
          Length = 397

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 108/212 (50%), Gaps = 4/212 (1%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SLK    L+ELDLSDNAFG    + +   L  +  F +  LKLNNNGLG +G  +++ AL
Sbjct: 90  SLKDLTSLIELDLSDNAFGGRSSDPIVPFLTQNRTFQI--LKLNNNGLGPSGGGIIANAL 147

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +    SK EG    L+  I GRNRL++E A + A  F        V MPQNGI   GI 
Sbjct: 148 LESARLSKAEGKASNLRTIICGRNRLQDESALLFAKAFAAHGNFVDVRMPQNGIRMDGIA 207

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL+     N  L  L+L DN     G   L +AL+  P L  LNL +CLL      ++A 
Sbjct: 208 ALARGLAANSRLESLDLQDNCAKGAGTRALAKALASWPELKTLNLSECLLGGRAGIALAL 267

Query: 400 YLTD--NTTLEDVNLTCNEISVQGGLDLVKAM 429
            L +  N  LE + L   E+  +    L KA+
Sbjct: 268 ALRNGSNPKLETLKLQLGELDHRSLSILAKAI 299



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V MPQNGI   GI AL+     N +L  L+L DN     G   L +AL+  P L  LNL 
Sbjct: 194 VRMPQNGIRMDGIAALARGLAANSRLESLDLQDNCAKGAGTRALAKALASWPELKTLNLS 253

Query: 75  DCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAM 118
           +CLL      ++A  L +  N  LE + L   E+  +    L KA+
Sbjct: 254 ECLLGGRAGIALALALRNGSNPKLETLKLQLGELDHRSLSILAKAI 299


>gi|395330858|gb|EJF63240.1| RNI-like protein [Dichomitus squalens LYAD-421 SS1]
          Length = 395

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 131/250 (52%), Gaps = 25/250 (10%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVE+DLSDNAFG   V+ L   L  S   +L  LKLNNNGLG  G  ++++AL     S 
Sbjct: 93  LVEIDLSDNAFGGRSVDPLVPFL--STARSLRVLKLNNNGLGPAGGAVIAEALTRLAGSL 150

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           +K G+   L+  I GRNRLE+  A   AA  +   TLE V MPQNGI   GI++L     
Sbjct: 151 EK-GTKSNLRTIICGRNRLEDGSASAWAAALEAHGTLEEVRMPQNGIRMAGISSLVKGLA 209

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK--LPSLAILNLGDCLLKSAG-ASSIAKYLT- 402
           +N +L HL+L DNT   +G       L +   P L +LNL DC++   G  S + + L  
Sbjct: 210 KNTDLLHLDLQDNTFAEEGGRAFADELGRGSWPLLKVLNLSDCVIGEEGEVSPVVEALAQ 269

Query: 403 ------DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
                 +N  L++ NL   E ++  G+         +KL  +   E Q+ E  VEE ++ 
Sbjct: 270 GLHTKLENLQLQNDNLEAAEFALLAGV--------VSKLPALKRLEAQWNE--VEEDDES 319

Query: 457 MKSFGMAAAL 466
           + +  +AAAL
Sbjct: 320 VAA--LAAAL 327



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 22/155 (14%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK--LPSL 68
           TLE V MPQNGI   GI++L     +N  L HL+L DNT   +G       L +   P L
Sbjct: 185 TLEEVRMPQNGIRMAGISSLVKGLAKNTDLLHLDLQDNTFAEEGGRAFADELGRGSWPLL 244

Query: 69  AILNLGDCLLKSAG-ASSIAKYLT-------DNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            +LNL DC++   G  S + + L        +N  L++ NL   E ++  G+        
Sbjct: 245 KVLNLSDCVIGEEGEVSPVVEALAQGLHTKLENLQLQNDNLEAAEFALLAGV-------- 296

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
            +KL  +   E Q+ E  VEE ++ + +  +AAAL
Sbjct: 297 VSKLPALKRLEAQWNE--VEEDDESVAA--LAAAL 327



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 37/151 (24%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           + ++A+ DA      L  ++L+DN    +   PL   LS   SL +L L +  L  AG +
Sbjct: 78  LALSAICDALIGKSTLVEIDLSDNAFGGRSVDPLVPFLSTARSLRVLKLNNNGLGPAGGA 137

Query: 85  SIAKYLT-------------------------------------DNTTLEDVNLTCNEIS 107
            IA+ LT                                      + TLE+V +  N I 
Sbjct: 138 VIAEALTRLAGSLEKGTKSNLRTIICGRNRLEDGSASAWAAALEAHGTLEEVRMPQNGIR 197

Query: 108 VQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           + G   LVK +   T L  +++ +N F EEG
Sbjct: 198 MAGISSLVKGLAKNTDLLHLDLQDNTFAEEG 228


>gi|320166420|gb|EFW43319.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 892

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 207/465 (44%), Gaps = 28/465 (6%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           M + GI       +++  +EN  L+ L L  N I   GA  +G AL   P L IL LG+ 
Sbjct: 1   MSKLGITDEDAVVIAEGLKENLNLQALMLEGNQIGDVGAQAIGSALRHTPKLFILFLGEN 60

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
            +   GA +I + +     L D+ +  N+I   G   +  A++NK  L  + + +N+ G+
Sbjct: 61  KIGDIGARAIGEGMQMLRALGDLRINANQIGDAGAQAIGAALRNKAGLSILCLEKNKIGD 120

Query: 137 EGVEEMEKLMKSFGMAAALVLEDDE-GECSDEE-------QDEESEEENDSDAEGDNSNL 188
            G   + + +++  +  AL +  ++ G+   +        +   +  E  ++  GD    
Sbjct: 121 VGARAIAEGLQTSKILGALRINANQIGDAGAQAIGLALRNKSSLAFLELGTNKIGDTGAR 180

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLAD 247
           +  +      A  +   + NQ  +   Q+  S L+  A+L  L LS N  G  G   +A+
Sbjct: 181 AIAEGLKKSPALTRLLMDKNQIGDAGAQAIGSALRNKAKLATLHLSSNKIGDTGARAIAE 240

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKAL---------------HDCYESSKKEGSP 292
            LR+S    L EL+++ N +G  G + +  AL                D   S+  +G  
Sbjct: 241 SLRTSA--ELTELRMHTNQIGDAGAQAIGSALLNKVLSRLDLAKNKIGDAGASAIADGLQ 298

Query: 293 L--ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
           +  AL       N + N GA+ + +  +    L  V++  N I   G  A++D    +  
Sbjct: 299 MLRALAHLEMNNNHIGNVGAQAIGSALRNKADLSIVDLGSNKIGDAGACAIADGLRSSTA 358

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           L  L ++ N I   GA  +G AL    +L++L +G   +  AGA +IA+ L  +T L D 
Sbjct: 359 LLTLGMHANQIGDMGAQAIGSALRNKANLSVLLMGSNKIGDAGACAIAEGLQTSTALTDF 418

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            +  N+I   G L +  +++NK  L  +++S NQ     V+ + +
Sbjct: 419 KMHVNQIGDTGALAIESSLRNKPLLAILHLSRNQISASAVQRLSQ 463



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 161/380 (42%), Gaps = 20/380 (5%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + A  +    L  + + +N I  VG  A+++  + +K L  L +N N I   GA  +G A
Sbjct: 98  IGAALRNKAGLSILCLEKNKIGDVGARAIAEGLQTSKILGALRINANQIGDAGAQAIGLA 157

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SLA L LG   +   GA +IA+ L  +  L  + +  N+I   G   +  A++NK
Sbjct: 158 LRNKSSLAFLELGTNKIGDTGARAIAEGLKKSPALTRLLMDKNQIGDAGAQAIGSALRNK 217

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE-GECSDEEQDEE------SE 174
            KL  +++S N+ G+ G   + + +++      L +  ++ G+   +           S 
Sbjct: 218 AKLATLHLSSNKIGDTGARAIAESLRTSAELTELRMHTNQIGDAGAQAIGSALLNKVLSR 277

Query: 175 EENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS-LKTGARLVELDLS 233
            +   +  GD    +  D      A      N+N   N   Q+  S L+  A L  +DL 
Sbjct: 278 LDLAKNKIGDAGASAIADGLQMLRALAHLEMNNNHIGNVGAQAIGSALRNKADLSIVDLG 337

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            N  G  G   +AD LRSS   AL  L ++ N +G  G + +  AL +            
Sbjct: 338 SNKIGDAGACAIADGLRSST--ALLTLGMHANQIGDMGAQAIGSALRNKAN--------- 386

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
            L V + G N++ + GA  +A   +    L   +M  N I   G  A+  +      L  
Sbjct: 387 -LSVLLMGSNKIGDAGACAIAEGLQTSTALTDFKMHVNQIGDTGALAIESSLRNKPLLAI 445

Query: 354 LNLNDNTITYKGAIPLGQAL 373
           L+L+ N I+      L Q++
Sbjct: 446 LHLSRNQISASAVQRLSQSI 465



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 12/239 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  L L  N  G +G + +   LR +    +  L L  N +G  G + + + + 
Sbjct: 18  LKENLNLQALMLEGNQIGDVGAQAIGSALRHTPKLFI--LFLGENKIGDIGARAIGEGMQ 75

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                        AL       N++ + GA+ + A  +    L  + + +N I  VG  A
Sbjct: 76  MLR----------ALGDLRINANQIGDAGAQAIGAALRNKAGLSILCLEKNKIGDVGARA 125

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++  + +K L  L +N N I   GA  +G AL    SLA L LG   +   GA +IA+ 
Sbjct: 126 IAEGLQTSKILGALRINANQIGDAGAQAIGLALRNKSSLAFLELGTNKIGDTGARAIAEG 185

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L  +  L  + +  N+I   G   +  A++NK KL  +++S N+ G+ G   + + +++
Sbjct: 186 LKKSPALTRLLMDKNQIGDAGAQAIGSALRNKAKLATLHLSSNKIGDTGARAIAESLRT 244


>gi|428176268|gb|EKX45153.1| hypothetical protein GUITHDRAFT_94709 [Guillardia theta CCMP2712]
          Length = 605

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 209/461 (45%), Gaps = 34/461 (7%)

Query: 1   MLAAVFKKLKTLEH---VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIP 57
           M+  +  +L   EH   V+MP   I   GI  ++ A + N  +R+++L+ N +   GA  
Sbjct: 7   MVNEMVSRLNCGEHLSEVKMPGCLIGKTGIAQVATAIQSNPHVRYVDLSSNGLNEYGATQ 66

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           + Q L    SL  L+L D  +K+AGA  ++K +  N+ L  ++L+CN I   G   +  A
Sbjct: 67  ISQFLRVTNSLRSLSLDDNSIKTAGAEELSKAIETNSNLHILHLSCNRIEDAGCRMIALA 126

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           ++N   +  + +  N  G+E  ++M   +        L L D                 N
Sbjct: 127 LRNNNSIHSLYLDNNNAGDEFGKDMGVTLTMNSTLRFLDLSD-----------------N 169

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
           D  A G  +      +N    + N S NN   ++  + +    L T   L +L +S N  
Sbjct: 170 DIKATGAMALAKALQNNSVVTSMNISRNNI--ANEGATEIARMLLTNTSLQQLRMSWNTI 227

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
              G   LA +L  +    L ++   +N +   G   L+KAL       +   S  AL +
Sbjct: 228 NDGGAHELAKVLSENSTLRLFDIA--DNRVSSVGATELAKAL-------RVNNSITALHL 278

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
                N +   GA+ +AA     K+L+ + +  N I   G  AL+DA  EN  L  L++ 
Sbjct: 279 ---SGNGIAGPGAQEVAAALHVNKSLQELYLAWNCIVEHGAKALADALCENTTLTTLDMG 335

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N I  +GA  + +AL++  +L +L+L   +LK  G   IAK L  N  LE ++L  NEI
Sbjct: 336 ANGIGKEGASHIARALTQNTTLKVLHLHGNVLKEEGPKQIAKALQTNKFLEFLDLDGNEI 395

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            V    +L +++K    L+ + ++ N+  + G  E+ + +K
Sbjct: 396 GVNNIKELAESVKINCSLQTLKLARNKINDIGAWELAEALK 436



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 186/414 (44%), Gaps = 43/414 (10%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++  N I   G  AL+ A + N  +  +N++ N I  +GA  + + L    SL  
Sbjct: 160 TLRFLDLSDNDIKATGAMALAKALQNNSVVTSMNISRNNIANEGATEIARMLLTNTSLQQ 219

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L +    +   GA  +AK L++N+TL   ++  N +S  G  +L KA++    +  +++S
Sbjct: 220 LRMSWNTINDGGAHELAKVLSENSTLRLFDIADNRVSSVGATELAKALRVNNSITALHLS 279

Query: 131 ENQFGEEGVEEME------KLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD 184
            N     G +E+       K ++   +A   ++E      +D   +  +    D  A G 
Sbjct: 280 GNGIAGPGAQEVAAALHVNKSLQELYLAWNCIVEHGAKALADALCENTTLTTLDMGANG- 338

Query: 185 NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEG 244
              +    ++H   A  Q         NT+            L  L L  N     G + 
Sbjct: 339 ---IGKEGASHIARALTQ---------NTT------------LKVLHLHGNVLKEEGPKQ 374

Query: 245 LADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNR 304
           +A  L+++    LE L L+ N +G+   K L+       ES K   S   LK+    RN+
Sbjct: 375 IAKALQTN--KFLEFLDLDGNEIGVNNIKELA-------ESVKINCSLQTLKL---ARNK 422

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           + + GA  LA   K  ++L ++++ +N +   G T L+D    N  LR L+L+ N I   
Sbjct: 423 INDIGAWELAEALKINRSLTKLDLTRNNVEETGATGLNDCLHINNTLRELHLSYNKIKET 482

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           GA+ + QA++   +L  L + D  +  AGA  IA+ L  N+T+  ++L  N IS
Sbjct: 483 GAMSIAQAINVNTTLHTLLIADNDIPDAGAMKIAEALAANSTIHTLDLLGNTIS 536



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 203/475 (42%), Gaps = 49/475 (10%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           + +V++  NG+   G T +S        LR L+L+DN+I   GA  L +A+    +L IL
Sbjct: 49  VRYVDLSSNGLNEYGATQISQFLRVTNSLRSLSLDDNSIKTAGAEELSKAIETNSNLHIL 108

Query: 72  NLGDCLLKSAGASSIA----------------------------KYLTDNTTLEDVNLTC 103
           +L    ++ AG   IA                              LT N+TL  ++L+ 
Sbjct: 109 HLSCNRIEDAGCRMIALALRNNNSIHSLYLDNNNAGDEFGKDMGVTLTMNSTLRFLDLSD 168

Query: 104 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGE 163
           N+I   G + L KA++N + +  +N+S N    EG  E+ +++ +      L +  +   
Sbjct: 169 NDIKATGAMALAKALQNNSVVTSMNISRNNIANEGATEIARMLLTNTSLQQLRMSWNTIN 228

Query: 164 CSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTS--------- 214
                +  +   EN +    D ++   +    +  A     NNS  + + S         
Sbjct: 229 DGGAHELAKVLSENSTLRLFDIADNRVSSVGATELAKALRVNNSITALHLSGNGIAGPGA 288

Query: 215 NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
            +   +L     L EL L+ N     G + LAD L  +    L  L +  NG+G  G   
Sbjct: 289 QEVAAALHVNKSLQELYLAWNCIVEHGAKALADALCENT--TLTTLDMGANGIGKEGASH 346

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           +++AL               LKV     N L+ EG K +A   +  K LE +++  N I 
Sbjct: 347 IARAL----------TQNTTLKVLHLHGNVLKEEGPKQIAKALQTNKFLEFLDLDGNEIG 396

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
              I  L+++ + N +L+ L L  N I   GA  L +AL    SL  L+L    ++  GA
Sbjct: 397 VNNIKELAESVKINCSLQTLKLARNKINDIGAWELAEALKINRSLTKLDLTRNNVEETGA 456

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           + +   L  N TL +++L+ N+I   G + + +A+   T L  + +++N   + G
Sbjct: 457 TGLNDCLHINNTLRELHLSYNKIKETGAMSIAQAINVNTTLHTLLIADNDIPDAG 511



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 57/106 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  ++L  +++ +N +   G T L+D    N  LR L+L+ N I   GA+ + QA
Sbjct: 431 LAEALKINRSLTKLDLTRNNVEETGATGLNDCLHINNTLRELHLSYNKIKETGAMSIAQA 490

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 107
           ++   +L  L + D  +  AGA  IA+ L  N+T+  ++L  N IS
Sbjct: 491 INVNTTLHTLLIADNDIPDAGAMKIAEALAANSTIHTLDLLGNTIS 536


>gi|331217107|ref|XP_003321232.1| hypothetical protein PGTG_02274 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309300222|gb|EFP76813.1| hypothetical protein PGTG_02274 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 487

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 117/222 (52%), Gaps = 9/222 (4%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DLSDNAFG   V+ +   L S     LEEL+L NNGLG  G  +++ ALH     +
Sbjct: 98  LTIVDLSDNAFGGRCVDVMVPFLSSH--LPLEELRLANNGLGPAGATVIANALHQLGMKA 155

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           ++ G    L+  + GRNR EN   +     F+    L  V + QN I + G   +     
Sbjct: 156 QEAGQTSRLRKIVCGRNRCENGSTQAWGKAFQVHPELIEVRLFQNDIRNNGWDPIMAGLS 215

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DN 404
               L+ L++ DNT T KG+  +  AL  L +L  LNLGDCLLK  G + IA+ L   +N
Sbjct: 216 HCSKLQVLDMWDNTATEKGSKAVANALPHLSALRELNLGDCLLKPRGGAMIARALKLGNN 275

Query: 405 TTLEDVNLTCNEIS--VQGGL-DLVKAMKNKTKLKQINVSEN 443
             LE + L+ +EI   V G L D VK     +KLK++ +++N
Sbjct: 276 PGLEHLKLSGSEIDEEVVGLLVDYVKEF--GSKLKKVELNDN 315



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 13/189 (6%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           F+    L  V + QN I + G   +        KL+ L++ DNT T KG+  +  AL  L
Sbjct: 186 FQVHPELIEVRLFQNDIRNNGWDPIMAGLSHCSKLQVLDMWDNTATEKGSKAVANALPHL 245

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEIS--VQGGL-DLVKAMKN 120
            +L  LNLGDCLLK  G + IA+ L   +N  LE + L+ +EI   V G L D VK    
Sbjct: 246 SALRELNLGDCLLKPRGGAMIARALKLGNNPGLEHLKLSGSEIDEEVVGLLVDYVKEF-- 303

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
            +KLK++ +++N    +   E+  +  +  M  AL   ++  E   +E DE  E E  SD
Sbjct: 304 GSKLKKVELNDNYGDADAAGELSGIWGA--MKEALDAWENGAEL--DELDEIIERE--SD 357

Query: 181 AEGDNSNLS 189
            E +NS  S
Sbjct: 358 DEDENSQAS 366


>gi|50546641|ref|XP_500790.1| YALI0B12210p [Yarrowia lipolytica]
 gi|49646656|emb|CAG83041.1| YALI0B12210p [Yarrowia lipolytica CLIB122]
          Length = 386

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 9/239 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +D SDNAFG   V+ LAD L       L+ L L NNG G      + +AL     + K+ 
Sbjct: 95  VDFSDNAFGITTVDPLADFLGKHV--PLQHLYLTNNGFGPAAGTKIGEALERLAAAKKEA 152

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA-LSDAFEEN 348
            S + L+  I GRNRLEN   +  A       +++ +++ QNGI   GI A L     + 
Sbjct: 153 KSDIKLETVICGRNRLENGSMESWAKYLATHGSVKNLQLKQNGIRQDGIVALLEKGLSKC 212

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L  L+L DNT T KGA  L +  S+ P L  L + DCLL   G+ ++ + L D   LE
Sbjct: 213 PKLEILDLQDNTFTKKGAKALTKVYSQWPELVELGISDCLLSGKGSVALGEALRDGKPLE 272

Query: 409 D---VNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEG--VEEMEKLMKSFG 461
               + L  NEI++ G   L +A+ KN   +K + ++ N F E+   +E++ KL  S G
Sbjct: 273 KLETLRLQYNEINLDGAEALYEALEKNLPAIKLLELNGNCFPEDEDVIEKITKLFDSRG 331



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 7/147 (4%)

Query: 11  TLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +++++++ QNGI   GI AL +    +  KL  L+L DNT T KGA  L +  S+ P L 
Sbjct: 185 SVKNLQLKQNGIRQDGIVALLEKGLSKCPKLEILDLQDNTFTKKGAKALTKVYSQWPELV 244

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLED---VNLTCNEISVQGGLDLVKAM-KNKTKLK 125
            L + DCLL   G+ ++ + L D   LE    + L  NEI++ G   L +A+ KN   +K
Sbjct: 245 ELGISDCLLSGKGSVALGEALRDGKPLEKLETLRLQYNEINLDGAEALYEALEKNLPAIK 304

Query: 126 QINVSENQFGEEG--VEEMEKLMKSFG 150
            + ++ N F E+   +E++ KL  S G
Sbjct: 305 LLELNGNCFPEDEDVIEKITKLFDSRG 331



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 21/226 (9%)

Query: 259 ELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
           E+    N  GI  CK ++ ++ D     K+  + ++      GR  L++E  K +  + +
Sbjct: 32  EVYFGGNTFGIDACKAIADSIKD-----KQNITKVSFDDIFTGR--LKDEIPKSMEHICE 84

Query: 319 KLKTLE---RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
            + TL+    V+   N      +  L+D   ++  L+HL L +N         +G+AL +
Sbjct: 85  AVLTLKNATTVDFSDNAFGITTVDPLADFLGKHVPLQHLYLTNNGFGPAAGTKIGEALER 144

Query: 376 LPS----------LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 425
           L +          L  +  G   L++    S AKYL  + +++++ L  N I   G + L
Sbjct: 145 LAAAKKEAKSDIKLETVICGRNRLENGSMESWAKYLATHGSVKNLQLKQNGIRQDGIVAL 204

Query: 426 V-KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           + K +    KL+ +++ +N F ++G + + K+   +     L + D
Sbjct: 205 LEKGLSKCPKLEILDLQDNTFTKKGAKALTKVYSQWPELVELGISD 250



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS- 67
           LK    V+   N      +  L+D   ++  L+HL L +N         +G+AL +L + 
Sbjct: 89  LKNATTVDFSDNAFGITTVDPLADFLGKHVPLQHLYLTNNGFGPAAGTKIGEALERLAAA 148

Query: 68  ---------LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KA 117
                    L  +  G   L++    S AKYL  + +++++ L  N I   G + L+ K 
Sbjct: 149 KKEAKSDIKLETVICGRNRLENGSMESWAKYLATHGSVKNLQLKQNGIRQDGIVALLEKG 208

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           +    KL+ +++ +N F ++G + + K+   +     L + D
Sbjct: 209 LSKCPKLEILDLQDNTFTKKGAKALTKVYSQWPELVELGISD 250


>gi|320162675|gb|EFW39574.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 925

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/477 (24%), Positives = 218/477 (45%), Gaps = 21/477 (4%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+  K+   V +  +GI       +++  +EN+ L+ L+L+DN I   GA  +G AL K
Sbjct: 12  LFEIAKSYSWVNLKSSGIADETAVVIAEGLKENRNLQMLDLSDNQIGDAGAQAIGAALRK 71

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
              L++L L +  +   GA +IA+ L  +T L  + +  N+I   G   +  A+++K KL
Sbjct: 72  KTKLSVLLLSNNKIGETGARAIAEGLQTSTALTQLGMHTNQIGDAGAQAIGPALRDKAKL 131

Query: 125 KQINVSENQFGEEGVEEMEKLMKS------FGMAAALVLEDDEGECSDEEQDEESEE--E 176
             +++  N+ G+ G   + + +K+       GM A LV +          +++ S     
Sbjct: 132 SLLHLESNKIGDAGARAIAEGLKTSTTLTKLGMRANLVGDAGAQAIGSVLRNKASLTGLY 191

Query: 177 NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDN 235
            D +  GD    +  D   +  A  +   N+NQ  +   Q+   +L+  A L  L L+ N
Sbjct: 192 LDKNTIGDTGARAIADGLQTTTALTELRMNANQIGDAGAQAIGTALRNKANLSLLYLNSN 251

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
             G  G   +A+ ++ S   AL +L++N N +G  G + ++  L +             L
Sbjct: 252 RIGDSGAIAIAEGMQMST--ALIDLRMNTNQIGDAGAQAIASTLRNKAN----------L 299

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
            +     N++ + GA+ +A   +    L R+ M  N I H G  A++ A     NL  L+
Sbjct: 300 SILYLDENKVGDAGARAVAEGLQVSTALTRLGMDSNRIGHAGAQAIAAALRNKANLSRLS 359

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L++N I   GA  + ++L    +L  L +    +  AGA +I   L +   L  + L  N
Sbjct: 360 LSNNKIGDTGAQAIAESLQTATALTELGMQTNHIGDAGAQAIGSTLRNKANLSILYLHRN 419

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           +I   G   + + ++  + L    +++NQ G+ G   +   +++    + L L +++
Sbjct: 420 KIGDTGARAIAEGLQTLSALTDFRMNDNQIGDAGAHAIGSALRNKATLSKLSLSNNQ 476



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 148/380 (38%), Gaps = 71/380 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +V +   +L  + + +N I   G  A++D  +    L  L +N N I   GA  +G A
Sbjct: 177 IGSVLRNKASLTGLYLDKNTIGDTGARAIADGLQTTTALTELRMNANQIGDAGAQAIGTA 236

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L++L L    +  +GA +IA+ +  +T L D+ +  N+I   G   +   ++NK
Sbjct: 237 LRNKANLSLLYLNSNRIGDSGAIAIAEGMQMSTALIDLRMNTNQIGDAGAQAIASTLRNK 296

Query: 122 TKLKQINVSENQFGEEGVE------EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEE 175
             L  + + EN+ G+ G        ++   +   GM                        
Sbjct: 297 ANLSILYLDENKVGDAGARAVAEGLQVSTALTRLGM------------------------ 332

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
                           DSN                H  +     +L+  A L  L LS+N
Sbjct: 333 ----------------DSNRI-------------GHAGAQAIAAALRNKANLSRLSLSNN 363

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
             G  G + +A+ L+++   AL EL +  N +G  G + +   L +             L
Sbjct: 364 KIGDTGAQAIAESLQTAT--ALTELGMQTNHIGDAGAQAIGSTLRNKAN----------L 411

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
            +    RN++ + GA+ +A   + L  L    M  N I   G  A+  A      L  L+
Sbjct: 412 SILYLHRNKIGDTGARAIAEGLQTLSALTDFRMNDNQIGDAGAHAIGSALRNKATLSKLS 471

Query: 356 LNDNTITYKGAIPLGQALSK 375
           L++N I+   A  L Q++ K
Sbjct: 472 LSNNQISSSAAQLLSQSVPK 491



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 125/331 (37%), Gaps = 65/331 (19%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N I   G  A++++ +    L  L +  N I   GA  +G  L    +L+IL
Sbjct: 355 LSRLSLSNNKIGDTGAQAIAESLQTATALTELGMQTNHIGDAGAQAIGSTLRNKANLSIL 414

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            L    +   GA +IA+ L   + L D  +  N+I   G   +  A++NK  L ++++S 
Sbjct: 415 YLHRNKIGDTGARAIAEGLQTLSALTDFRMNDNQIGDAGAHAIGSALRNKATLSKLSLSN 474

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           NQ                  AA L+ +     C   E   ES+  +  DA    S     
Sbjct: 475 NQISSS--------------AAQLLSQSVPKTC---EFSAESQRGSFQDATPPAS----- 512

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
            S  S   ++ S   S+    + + S    +  AR+ +L+L+     PI           
Sbjct: 513 PSVISTKTAHLSDTPSSPLPTSDSMSQDVRQLQARIAQLELAQQTTNPI----------- 561

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSK-------------KEGSPLALKVF 298
                       N+G+     ++LS+A     ES +               G P+A+K  
Sbjct: 562 ------------NSGIPRVPLQVLSQATAQFSESKRIGAGGFGHVYSGVWSGQPVAVKRL 609

Query: 299 IAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
            AG     N+G   +A    +L+ L R   P
Sbjct: 610 AAG----SNQG---VAQFESELEALSRFRHP 633


>gi|156390401|ref|XP_001635259.1| predicted protein [Nematostella vectensis]
 gi|156222351|gb|EDO43196.1| predicted protein [Nematostella vectensis]
          Length = 398

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 206/442 (46%), Gaps = 61/442 (13%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE +++  N I   G  A++ A   N  L  L+L  N I  +GAI + +AL    +L  
Sbjct: 5   TLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLEK 64

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS--VQGGLDLVKAMKNKTKLKQIN 128
           L+L    +   GA +IAK L  N+TLE ++L  N+I    +G + + KA+   + L++++
Sbjct: 65  LDLEGNKIGDDGAIAIAKALMTNSTLEKLDLEGNKIGDEDEGAIAIAKALMTNSTLEKLD 124

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           +  N+ G+EG         +  +A AL+        + E+ D E  +  D  A      L
Sbjct: 125 LEGNKIGDEG---------AIAIAKALMT-----NSTLEKLDLEGNKIGDEGAIAIAKAL 170

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
             N +                                 L +LDL  N  G  G   +A  
Sbjct: 171 MTNST---------------------------------LEKLDLEGNKIGDEGAIAIAKA 197

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L ++    L++L L  N +G  G   ++KAL     S+ K       K+ + G N++ +E
Sbjct: 198 LMTNST--LKKLDLEGNKIGDEGAIAIAKAL--MTNSTLK-------KLDLEG-NKIGDE 245

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA  +A       TL+++++  N I   G  A++ A   N  L+ L+L  N I  +GAI 
Sbjct: 246 GAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIA 305

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +AL    +L  L+L    +   GA +IAK L  N+TL+ ++L  N+I  +G + + KA
Sbjct: 306 IAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKA 365

Query: 429 MKNKTKLKQINVSENQFGEEGV 450
           +   + LK++++  N+ G+EG 
Sbjct: 366 LMTNSTLKKLDLEGNKIGDEGA 387



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 184/400 (46%), Gaps = 39/400 (9%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE +++  N I   G  A++ A   N  L  L+L  N I   GAI + +AL    +L  
Sbjct: 33  TLEKLDLEGNKIGDEGAIAIAKALMTNSTLEKLDLEGNKIGDDGAIAIAKALMTNSTLEK 92

Query: 71  LNL-----GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
           L+L     GD   +  GA +IAK L  N+TLE ++L  N+I  +G + + KA+   + L+
Sbjct: 93  LDLEGNKIGD---EDEGAIAIAKALMTNSTLEKLDLEGNKIGDEGAIAIAKALMTNSTLE 149

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
           ++++  N+ G+EG         +  +A AL+        + E+ D E  +  D  A    
Sbjct: 150 KLDLEGNKIGDEG---------AIAIAKALMTN-----STLEKLDLEGNKIGDEGAIAIA 195

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
             L  N +    +       +             +L T + L +LDL  N  G  G   +
Sbjct: 196 KALMTNSTLKKLDLEGNKIGDEGAIAIAK-----ALMTNSTLKKLDLEGNKIGDEGAIAI 250

Query: 246 ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
           A  L ++    L++L L  N +G  G   ++KAL     S+ K       K+ + G N++
Sbjct: 251 AKALMTNST--LKKLDLEGNKIGDEGAIAIAKAL--MTNSTLK-------KLDLEG-NKI 298

Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
            +EGA  +A       TL+++++  N I   G  A++ A   N  L+ L+L  N I  +G
Sbjct: 299 GDEGAIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNSTLKKLDLEGNKIGDEG 358

Query: 366 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
           AI + +AL    +L  L+L    +   GA +IAK L  N+
Sbjct: 359 AIAIAKALMTNSTLKKLDLEGNKIGDEGAIAIAKALMTNS 398


>gi|331233436|ref|XP_003329379.1| hypothetical protein PGTG_10431 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309308369|gb|EFP84960.1| hypothetical protein PGTG_10431 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 500

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 117/222 (52%), Gaps = 9/222 (4%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DLSDNAFG   V+ +   L S     LEEL+L NNGLG  G  +++ ALH     +
Sbjct: 129 LTIVDLSDNAFGGRCVDVMVPFLSSH--LPLEELRLANNGLGPAGATVIANALHKLGMKA 186

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           ++ G    L+  + GRNR EN   +     F+    L  V + QN I + G   +     
Sbjct: 187 QEAGQTSRLRKIVCGRNRCENGSTQAWGQAFQVHPELIEVRLFQNDIRNNGWDPIMAGLS 246

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DN 404
               L+ L++ DNT T KG+  +  AL  L +L  LNLGDCLLK  G + IA+ L   +N
Sbjct: 247 HCSKLQVLDMWDNTATEKGSKAVANALPHLSALRELNLGDCLLKPRGGAMIARALKLGNN 306

Query: 405 TTLEDVNLTCNEIS--VQGGL-DLVKAMKNKTKLKQINVSEN 443
             LE + L+ +EI   V G L D VK     +KLK++ +++N
Sbjct: 307 PGLEHLKLSGSEIDEEVVGLLVDYVKEF--GSKLKKVELNDN 346



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 21/245 (8%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           F+    L  V + QN I + G   +        KL+ L++ DNT T KG+  +  AL  L
Sbjct: 217 FQVHPELIEVRLFQNDIRNNGWDPIMAGLSHCSKLQVLDMWDNTATEKGSKAVANALPHL 276

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEIS--VQGGL-DLVKAMKN 120
            +L  LNLGDCLLK  G + IA+ L   +N  LE + L+ +EI   V G L D VK    
Sbjct: 277 SALRELNLGDCLLKPRGGAMIARALKLGNNPGLEHLKLSGSEIDEEVVGLLVDYVKEF-- 334

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGEC----------SDEEQD 170
            +KLK++ +++N    +   E+  +  +  M  AL   D+  E           SD+E +
Sbjct: 335 GSKLKKVELNDNYGDADAAGELSGIWGA--MKEALDAWDNGAELDELDEIIERESDDEDE 392

Query: 171 EESEEENDSDAEGDNSNLSHNDSNHSHNAS-NQSHNNSNQSHNTSNQSHMSLKTGARLVE 229
                ++D D+E + ++ +  DS      + +++ + +NQS N +  S  ++  G + V+
Sbjct: 393 NSQASDDDGDSEVEETSAAEEDSASERVVTKDKTESTTNQS-NATQPSPTAVPGGDQTVQ 451

Query: 230 LDLSD 234
            ++S+
Sbjct: 452 PEVSE 456


>gi|190344795|gb|EDK36550.2| hypothetical protein PGUG_00648 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 414

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 128/241 (53%), Gaps = 9/241 (3%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           ++L  ++L DNAFG   ++ + D L  +    +E L L+NNG+G      +   L    +
Sbjct: 105 SKLSLVNLCDNAFGLQTIDPIEDYLAKAV--TIEHLILSNNGMGPFAGARIGTCLFKLAK 162

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SD 343
           + +  G P +LK FI GRNRLE+     L+   +  K L+ V + QNGI   GI  L  D
Sbjct: 163 AKQAAGKP-SLKSFICGRNRLEDGSTNHLSIGLRNHKDLQVVRLYQNGIRPKGIARLLRD 221

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
               NK L+ L+L DNT T K +  L + L + P L  LNL DCLLK++G+ S+A+ L+ 
Sbjct: 222 GLSRNKELQILDLQDNTFTAKPSAVLAETLDQWPKLKELNLNDCLLKASGSLSLAEALSK 281

Query: 404 N---TTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKS 459
           +   T LE + L  NE+       L +A+  K   LK + ++ N+F EE    +EK+   
Sbjct: 282 SESKTQLETLRLQYNELEEDALKVLAEAVTAKLPNLKVLELNGNRF-EEDSPSLEKINGV 340

Query: 460 F 460
           F
Sbjct: 341 F 341



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 6/145 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L+ V + QNGI   GI  L  D    NK+L+ L+L DNT T K +  L + L + P L
Sbjct: 198 KDLQVVRLYQNGIRPKGIARLLRDGLSRNKELQILDLQDNTFTAKPSAVLAETLDQWPKL 257

Query: 69  AILNLGDCLLKSAGASSIAKYLTDN---TTLEDVNLTCNEISVQGGLDLVKAMKNK-TKL 124
             LNL DCLLK++G+ S+A+ L+ +   T LE + L  NE+       L +A+  K   L
Sbjct: 258 KELNLNDCLLKASGSLSLAEALSKSESKTQLETLRLQYNELEEDALKVLAEAVTAKLPNL 317

Query: 125 KQINVSENQFGEEGVEEMEKLMKSF 149
           K + ++ N+F EE    +EK+   F
Sbjct: 318 KVLELNGNRF-EEDSPSLEKINGVF 341


>gi|392566179|gb|EIW59355.1| RNI-like protein [Trametes versicolor FP-101664 SS1]
          Length = 404

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 118/227 (51%), Gaps = 8/227 (3%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVE+DLSDNAFG   V+ L   L  S   +L  LKLNNNGLG  G  +++ ALH    S 
Sbjct: 94  LVEIDLSDNAFGGRSVDPLVPFL--SSARSLRVLKLNNNGLGPAGGTVIADALHTLASSL 151

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            K+ +   L+  I GRNRLE+  A   AA  +   TL  V MPQNGI   GITAL     
Sbjct: 152 PKD-TRSNLQTVICGRNRLEDGSATAWAAALRAHGTLREVRMPQNGIRMDGITALVHGLA 210

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK--LPSLAILNLGDCLLKSAG-ASSIAKYLTD 403
            N++L +L+L DNT   +GA  +   L++   P L  LNL DC+L   G  S + + L  
Sbjct: 211 ANESLDYLDLQDNTFAAEGAKTMAAELNRGSWPLLRQLNLSDCVLGEEGEVSPVVEALAK 270

Query: 404 --NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
             +  LE + L  + +  +    L   +    KL+++    N+  EE
Sbjct: 271 GLHGKLEILQLQNDNLETEAFSLLAGVVGKLPKLRRVEAQWNEVDEE 317



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK--LPSL 68
           TL  V MPQNGI   GITAL      N+ L +L+L DNT   +GA  +   L++   P L
Sbjct: 186 TLREVRMPQNGIRMDGITALVHGLAANESLDYLDLQDNTFAAEGAKTMAAELNRGSWPLL 245

Query: 69  AILNLGDCLLKSAG-ASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
             LNL DC+L   G  S + + L    +  LE + L  + +  +    L   +    KL+
Sbjct: 246 RQLNLSDCVLGEEGEVSPVVEALAKGLHGKLEILQLQNDNLETEAFSLLAGVVGKLPKLR 305

Query: 126 QINVSENQFGEE 137
           ++    N+  EE
Sbjct: 306 RVEAQWNEVDEE 317


>gi|254574100|ref|XP_002494159.1| GTPase activating protein (GAP) for Gsp1p, involved in nuclear
           transport [Komagataella pastoris GS115]
 gi|238033958|emb|CAY71980.1| GTPase activating protein (GAP) for Gsp1p, involved in nuclear
           transport [Komagataella pastoris GS115]
 gi|328354022|emb|CCA40419.1| Ran GTPase-activating protein 1 [Komagataella pastoris CBS 7435]
          Length = 420

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 123/240 (51%), Gaps = 8/240 (3%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD-CYE 284
           +L  L+LSDNAFG   ++ +   L  +   +LE L L+NNG+G      + K+L+     
Sbjct: 107 KLRVLNLSDNAFGLQTIDPIESFLAQAV--SLEHLILSNNGMGPYAGSRIGKSLYKLSVA 164

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS-D 343
            SK + +P +LK F  GRNRLE+     LA   +  K LE V + QNGI   G++ L   
Sbjct: 165 KSKTQNAPDSLKTFYCGRNRLESGSVNYLAIGLRAHKNLESVRLYQNGIRPAGVSKLILQ 224

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             + N  L+  +L DNT T+KGA  L  +L    SL  +N+ DCLL   G+   AK L +
Sbjct: 225 GLKANTELKVFDLQDNTFTFKGAKALSVSLPSWSSLKEINVNDCLLNPKGSFEFAKALKE 284

Query: 404 NTT---LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
                 LE + L  NE+       LV+++     LK + ++ N+F EE    +EKL   F
Sbjct: 285 GDVSKELEILKLQYNELEANSLELLVESIDKFPNLKVLELNGNRF-EEDSALIEKLSSIF 343



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 5/152 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALS-DAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA   +  K LE V + QNGI   G++ L     + N +L+  +L DNT T+KGA  L  
Sbjct: 193 LAIGLRAHKNLESVRLYQNGIRPAGVSKLILQGLKANTELKVFDLQDNTFTFKGAKALSV 252

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT---LEDVNLTCNEISVQGGLDLVKA 117
           +L    SL  +N+ DCLL   G+   AK L +      LE + L  NE+       LV++
Sbjct: 253 SLPSWSSLKEINVNDCLLNPKGSFEFAKALKEGDVSKELEILKLQYNELEANSLELLVES 312

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           +     LK + ++ N+F EE    +EKL   F
Sbjct: 313 IDKFPNLKVLELNGNRF-EEDSALIEKLSSIF 343


>gi|149241864|ref|XP_001526370.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450493|gb|EDK44749.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 412

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 128/236 (54%), Gaps = 9/236 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ + D +  +   ++E L L+NNG+G      +  +L    ++ + +
Sbjct: 107 VNLSDNAFGLQTIDPIDDYIAKAV--SIEHLILSNNGMGPFAGSRIGGSLFKLAKAKEAK 164

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEEN 348
             P +LK F+ GRNRLEN     LA   +  K LE V + QNGI   GI+ L +    +N
Sbjct: 165 KLP-SLKTFVCGRNRLENGSVNHLAVGLRNHKDLEVVRLYQNGIRPAGISKLIEKGLSQN 223

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT---DNT 405
           K L+ L+L DNTIT KGAI L +++S  P L  LNL D LLK+ G+  + K ++      
Sbjct: 224 KKLKVLDLQDNTITTKGAIKLAESISNWPELVELNLNDSLLKNKGSLEVVKAISKGDKKE 283

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKSF 460
            L  + L  NE+ V     L +A+ +    LK + ++ N+F EE  E + K+   F
Sbjct: 284 YLTTLKLQYNELEVDSLEVLAEAIGSHLPNLKYLELNGNRF-EEDSEHITKINYIF 338



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 6/153 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA   +  K LE V + QNGI   GI+ L +    +NKKL+ L+L DNTIT KGAI L +
Sbjct: 187 LAVGLRNHKDLEVVRLYQNGIRPAGISKLIEKGLSQNKKLKVLDLQDNTITTKGAIKLAE 246

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT---DNTTLEDVNLTCNEISVQGGLDLVKA 117
           ++S  P L  LNL D LLK+ G+  + K ++       L  + L  NE+ V     L +A
Sbjct: 247 SISNWPELVELNLNDSLLKNKGSLEVVKAISKGDKKEYLTTLKLQYNELEVDSLEVLAEA 306

Query: 118 MKNK-TKLKQINVSENQFGEEGVEEMEKLMKSF 149
           + +    LK + ++ N+F EE  E + K+   F
Sbjct: 307 IGSHLPNLKYLELNGNRF-EEDSEHITKINYIF 338


>gi|213409477|ref|XP_002175509.1| ran GAP Rna1 [Schizosaccharomyces japonicus yFS275]
 gi|212003556|gb|EEB09216.1| ran GAP Rna1 [Schizosaccharomyces japonicus yFS275]
          Length = 378

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 117/239 (48%), Gaps = 11/239 (4%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI-TGCKLLSKALHDCYESSKKEG 290
           LSDNAFGP   E L D L       L+ L L+NNGLG  TG K+     +      K   
Sbjct: 101 LSDNAFGPTAQEPLIDFLSRHT--PLQHLYLHNNGLGPQTGAKIAGALKNLAANKKKANA 158

Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDAFEENK 349
            PL  +  I GRNRLEN   +  A  F+    LE V M QNGI   GI   L        
Sbjct: 159 KPL--RTIICGRNRLENGSMEAWAEAFQSNPHLEVVRMVQNGIRPEGIEHLLIHGLSHCT 216

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--TL 407
            LR L+L DNT T++G   L  AL+K P L  L + DCLL + G  ++ +    N+   L
Sbjct: 217 KLRILDLQDNTFTHRGTSALAVALAKWPGLQELGMNDCLLSAPGGIALMESFAKNSHKEL 276

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEG--VEEMEKLMKSFGMA 463
           E + L  NEI +     L + ++ +  KLK + ++ N+F E+   V+E+  L  + G  
Sbjct: 277 EILRLQYNEIELPAVQQLSELIEERFPKLKLLELNGNRFSEDDDVVDEIRALFSNRGFG 335



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 6/157 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F+    LE V M QNGI   GI   L        KLR L+L DNT T++G   L  
Sbjct: 179 WAEAFQSNPHLEVVRMVQNGIRPEGIEHLLIHGLSHCTKLRILDLQDNTFTHRGTSALAV 238

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLDLVKAM 118
           AL+K P L  L + DCLL + G  ++ +    N+   LE + L  NEI +     L + +
Sbjct: 239 ALAKWPGLQELGMNDCLLSAPGGIALMESFAKNSHKELEILRLQYNEIELPAVQQLSELI 298

Query: 119 KNK-TKLKQINVSENQFGEEG--VEEMEKLMKSFGMA 152
           + +  KLK + ++ N+F E+   V+E+  L  + G  
Sbjct: 299 EERFPKLKLLELNGNRFSEDDDVVDEIRALFSNRGFG 335


>gi|146422671|ref|XP_001487271.1| hypothetical protein PGUG_00648 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 414

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 128/241 (53%), Gaps = 9/241 (3%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           ++L+ ++L DNAFG   ++ + D L  +    +E L L+NNG+G      +   L    +
Sbjct: 105 SKLLLVNLCDNAFGLQTIDPIEDYLAKAV--TIEHLILSNNGMGPFAGARIGTCLFKLAK 162

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SD 343
           + +  G P +LK FI GRNRLE+     L+   +  K L+ V + QNGI   GI  L  D
Sbjct: 163 AKQAAGKP-SLKSFICGRNRLEDGSTNHLSIGLRNHKDLQVVRLYQNGIRPKGIARLLRD 221

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
               NK L+ L+L DNT T K +  L + L + P L  LNL DCLLK++G+  +A+ L+ 
Sbjct: 222 GLSRNKELQILDLQDNTFTAKPSAVLAETLDQWPKLKELNLNDCLLKASGSLLLAEALSK 281

Query: 404 N---TTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKS 459
           +   T LE + L  NE+       L +A+  K   LK + ++ N+F EE    +EK+   
Sbjct: 282 SESKTQLETLRLQYNELEEDALKVLAEAVTAKLPNLKVLELNGNRF-EEDSPSLEKINGV 340

Query: 460 F 460
           F
Sbjct: 341 F 341



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L+ V + QNGI   GI  L  D    NK+L+ L+L DNT T K +  L + L + P L
Sbjct: 198 KDLQVVRLYQNGIRPKGIARLLRDGLSRNKELQILDLQDNTFTAKPSAVLAETLDQWPKL 257

Query: 69  AILNLGDCLLKSAGASSIAKYLTDN---TTLEDVNLTCNEISVQGGLDLVKAMKNK-TKL 124
             LNL DCLLK++G+  +A+ L+ +   T LE + L  NE+       L +A+  K   L
Sbjct: 258 KELNLNDCLLKASGSLLLAEALSKSESKTQLETLRLQYNELEEDALKVLAEAVTAKLPNL 317

Query: 125 KQINVSENQFGEEGVEEMEKLMKSF 149
           K + ++ N+F EE    +EK+   F
Sbjct: 318 KVLELNGNRF-EEDSPSLEKINGVF 341


>gi|344301137|gb|EGW31449.1| hypothetical protein SPAPADRAFT_62021 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 414

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 124/236 (52%), Gaps = 9/236 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ + D L  +   ++E L L+NNG+G      +  +L    ++ K  
Sbjct: 112 INLSDNAFGLQTIDPIEDYL--AKAISIEHLILSNNGMGPFAGARIGGSLFKLAQAKKLA 169

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEEN 348
           G P +LK FI GRNRLEN     LA   +  + LE V + QNGI   GI+ L +     N
Sbjct: 170 GKP-SLKTFICGRNRLENGSINYLAVGLRNHQDLEVVRLYQNGIRPAGISKLIEKGLSNN 228

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD---NT 405
           K L+ L+L DNTIT  GAI L + LS    L  LNL D LLK+ G+  + + L       
Sbjct: 229 KKLKVLDLQDNTITTNGAIKLAETLSSWNDLVELNLNDSLLKNKGSLKLVEALHTGDAKK 288

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKSF 460
            L  + L  NE+ V     L  A+ +K   LK + ++ N+F EE  E +E + + F
Sbjct: 289 NLLTLKLQYNELEVDSLRILADAIASKLPNLKFLELNGNRF-EEDSEHIEAINEIF 343



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 79/153 (51%), Gaps = 6/153 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA   +  + LE V + QNGI   GI+ L +     NKKL+ L+L DNTIT  GAI L +
Sbjct: 192 LAVGLRNHQDLEVVRLYQNGIRPAGISKLIEKGLSNNKKLKVLDLQDNTITTNGAIKLAE 251

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD---NTTLEDVNLTCNEISVQGGLDLVKA 117
            LS    L  LNL D LLK+ G+  + + L        L  + L  NE+ V     L  A
Sbjct: 252 TLSSWNDLVELNLNDSLLKNKGSLKLVEALHTGDAKKNLLTLKLQYNELEVDSLRILADA 311

Query: 118 MKNK-TKLKQINVSENQFGEEGVEEMEKLMKSF 149
           + +K   LK + ++ N+F EE  E +E + + F
Sbjct: 312 IASKLPNLKFLELNGNRF-EEDSEHIEAINEIF 343


>gi|344232452|gb|EGV64331.1| RNI-like protein [Candida tenuis ATCC 10573]
 gi|344232453|gb|EGV64332.1| hypothetical protein CANTEDRAFT_114061 [Candida tenuis ATCC 10573]
          Length = 393

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 5/237 (2%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
            +L  ++LSDNA G   +E + + L  +  + LE L L+NNG+G    + + KAL+    
Sbjct: 95  PKLTTINLSDNALGLQTIEPIENYLAKA--YTLEHLILSNNGMGPFSGERIGKALYKLST 152

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
             K++  P +LK FI GRNRLEN   K LA      K L+ V + QNGI  +GI  L   
Sbjct: 153 LKKQKKYP-SLKTFICGRNRLENGSMKYLALGLINHKDLQEVRLYQNGIRPIGIATLLSG 211

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            ++N+ L+ L+L DNT+T  G+  +   L    +L  LNL DCL KS G   I   L   
Sbjct: 212 LKQNQKLKVLDLQDNTLTSLGSSAIASNLGSWTALEELNLNDCLTKSKGFLHILTNLPLV 271

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEMEKLMKSF 460
             L+ + L  NE+       L + + + K  ++++ ++ N+  EE  E +EK ++ F
Sbjct: 272 KDLKVLKLQYNELDKTALTKLYELIDSGKVTVQKLEINGNKL-EEDDELIEKFVELF 327



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K L+ V + QNGI  +GI  L    ++N+KL+ L+L DNT+T  G+  +   L    +L 
Sbjct: 188 KDLQEVRLYQNGIRPIGIATLLSGLKQNQKLKVLDLQDNTLTSLGSSAIASNLGSWTALE 247

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQIN 128
            LNL DCL KS G   I   L     L+ + L  NE+       L + + + K  ++++ 
Sbjct: 248 ELNLNDCLTKSKGFLHILTNLPLVKDLKVLKLQYNELDKTALTKLYELIDSGKVTVQKLE 307

Query: 129 VSENQFGEEGVEEMEKLMKSF 149
           ++ N+  EE  E +EK ++ F
Sbjct: 308 INGNKL-EEDDELIEKFVELF 327


>gi|68468576|ref|XP_721607.1| hypothetical protein CaO19.9218 [Candida albicans SC5314]
 gi|46443530|gb|EAL02811.1| hypothetical protein CaO19.9218 [Candida albicans SC5314]
          Length = 414

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 9/236 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ +   L  +   ++E L L+NNG+G      +  +L    ++ K E
Sbjct: 110 INLSDNAFGLQTIDPIEAYLAKAV--SIEHLILSNNGMGPFAGSRIGGSLFKLAKAKKAE 167

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEEN 348
           G   +LK FI GRNRLEN     L+   +  K LE V + QNGI   GI+ L +     N
Sbjct: 168 GKE-SLKTFICGRNRLENGSVNYLSVGLRNHKDLEVVRLYQNGIRPAGISKLVEQGLSNN 226

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNT 405
           K L+ L+L DNTIT +GAI + ++LS  P L  LNL D LLK+ G+  + +      +  
Sbjct: 227 KKLKVLDLQDNTITTRGAIHIAESLSNWPLLVELNLNDSLLKNKGSLKLVEAFHAGDEKP 286

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKSF 460
            L  + L  NE+       L  A+ +K  +LK + ++ N+F EE  E ++K+   F
Sbjct: 287 QLITLKLQYNELETDSLRVLADAIASKLPQLKFLELNGNRF-EEDSEHIDKINGIF 341



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K LE V + QNGI   GI+ L +     NKKL+ L+L DNTIT +GAI + ++LS  P L
Sbjct: 198 KDLEVVRLYQNGIRPAGISKLVEQGLSNNKKLKVLDLQDNTITTRGAIHIAESLSNWPLL 257

Query: 69  AILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKL 124
             LNL D LLK+ G+  + +      +   L  + L  NE+       L  A+ +K  +L
Sbjct: 258 VELNLNDSLLKNKGSLKLVEAFHAGDEKPQLITLKLQYNELETDSLRVLADAIASKLPQL 317

Query: 125 KQINVSENQFGEEGVEEMEKLMKSF 149
           K + ++ N+F EE  E ++K+   F
Sbjct: 318 KFLELNGNRF-EEDSEHIDKINGIF 341


>gi|406943965|gb|EKD75840.1| hypothetical protein ACD_44C00009G0001 [uncultured bacterium]
          Length = 773

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 197/450 (43%), Gaps = 60/450 (13%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +++   ++  T++ + +  N + +VG  AL+  FE N  +  LN+N+N I+ +GA  + +
Sbjct: 296 LISQALERNNTIQVLNLVSNHMGNVGAMALARLFEFNHTITELNINNNQISDEGAQVIAE 355

Query: 61  ALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
            LS+   ++  L+L   L+   GA + A  L +NT+L  ++L+ N I V G   + +A  
Sbjct: 356 ILSRNNCAITKLSLAVNLIGDEGAIACASLLENNTSLTRLDLSSNRIGVLGAGPVARAFI 415

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
               L+ +  + N  G    E        F  A  + L  +  +  + + D E      +
Sbjct: 416 KNNTLRTLIFTRNNAGPRTAE-------IFAEALVVNLSLESLDLRENQLDREG-----A 463

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
              G   NL                             ++S+K       L+L  N  G 
Sbjct: 464 VVLGKKLNL-----------------------------NISVK------RLNLGWNGIGS 488

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
            GV GLA+    + C  ++EL L NNG+ + G   L +AL           +  +L V  
Sbjct: 489 EGVAGLAEAFYENAC--IQELNLQNNGIEVEGGIPLFRALE----------ANTSLVVLD 536

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N L ++  K+LA V  K  +L+ +E   N I   G  AL+ A   N ++  L L  N
Sbjct: 537 ISHNELGDDDIKILAPVISKNSSLKTLEFCSNAITAQGARALAKALVVNSSVTELGLGVN 596

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            I  +G   L +AL +  SL IL L    +   GA  + K L  N TL  + L  N +S 
Sbjct: 597 NIGDRGTKALAKALRQNTSLKILTLEASEVGDGGAQVLGKALLCNCTLTTLRLNKNNLSK 656

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           QG   L+KA+++   L  + +++N  G+ G
Sbjct: 657 QGAKSLIKALEHNASLTSLELAKNNLGDIG 686



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 20/264 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL--HDCYE 284
           + +L L+ N  G  G    A LL ++   +L  L L++N +G+ G   +++A   ++   
Sbjct: 364 ITKLSLAVNLIGDEGAIACASLLENNT--SLTRLDLSSNRIGVLGAGPVARAFIKNNTLR 421

Query: 285 S---SKKEGSPLALKVFIAG-------------RNRLENEGAKMLAAVFKKLKTLERVEM 328
           +   ++    P   ++F                 N+L+ EGA +L        +++R+ +
Sbjct: 422 TLIFTRNNAGPRTAEIFAEALVVNLSLESLDLRENQLDREGAVVLGKKLNLNISVKRLNL 481

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
             NGI   G+  L++AF EN  ++ LNL +N I  +G IPL +AL    SL +L++    
Sbjct: 482 GWNGIGSEGVAGLAEAFYENACIQELNLQNNGIEVEGGIPLFRALEANTSLVVLDISHNE 541

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           L       +A  ++ N++L+ +    N I+ QG   L KA+   + + ++ +  N  G+ 
Sbjct: 542 LGDDDIKILAPVISKNSSLKTLEFCSNAITAQGARALAKALVVNSSVTELGLGVNNIGDR 601

Query: 449 GVEEMEKLMKSFGMAAALVLEDDE 472
           G + + K ++       L LE  E
Sbjct: 602 GTKALAKALRQNTSLKILTLEASE 625


>gi|68468333|ref|XP_721726.1| hypothetical protein CaO19.1649 [Candida albicans SC5314]
 gi|46443658|gb|EAL02938.1| hypothetical protein CaO19.1649 [Candida albicans SC5314]
 gi|238880624|gb|EEQ44262.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 414

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 9/236 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ +   L  +   ++E L L+NNG+G      +  +L    ++ K E
Sbjct: 110 INLSDNAFGLQTIDPIEAYLAKAV--SIEHLILSNNGMGPFAGSRIGGSLFKLAKAKKAE 167

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEEN 348
           G   +LK FI GRNRLEN     L+   +  K LE V + QNGI   GI+ L +     N
Sbjct: 168 GKE-SLKTFICGRNRLENGSVNYLSVGLRNHKDLEVVRLYQNGIRPAGISKLVEQGLSNN 226

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNT 405
           K L+ L+L DNTIT +GAI + ++LS  P L  LNL D LLK+ G+  + +      +  
Sbjct: 227 KKLKVLDLQDNTITTRGAIHIAESLSNWPLLVELNLNDSLLKNKGSLKLVEAFHAGDEKP 286

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKSF 460
            L  + L  NE+       L  A+ +K  +LK + ++ N+F EE  E ++K+   F
Sbjct: 287 QLITLKLQYNELETDSLRVLADAIASKLPQLKFLELNGNRF-EEDSEHIDKINGIF 341



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K LE V + QNGI   GI+ L +     NKKL+ L+L DNTIT +GAI + ++LS  P L
Sbjct: 198 KDLEVVRLYQNGIRPAGISKLVEQGLSNNKKLKVLDLQDNTITTRGAIHIAESLSNWPLL 257

Query: 69  AILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKL 124
             LNL D LLK+ G+  + +      +   L  + L  NE+       L  A+ +K  +L
Sbjct: 258 VELNLNDSLLKNKGSLKLVEAFHAGDEKPQLITLKLQYNELETDSLRVLADAIASKLPQL 317

Query: 125 KQINVSENQFGEEGVEEMEKLMKSF 149
           K + ++ N+F EE  E ++K+   F
Sbjct: 318 KFLELNGNRF-EEDSEHIDKINGIF 341


>gi|403370974|gb|EJY85359.1| Ran GTPase-activating protein 1 [Oxytricha trifallax]
          Length = 375

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 114/193 (59%), Gaps = 13/193 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           ++V LD+S+NAFGP G++    LL+     +L+ LK+ N GLG  G ++++ AL      
Sbjct: 101 KIVYLDMSNNAFGPAGIKSFDFLLKEMA--SLKVLKVTNCGLGPEGGEMIANAL------ 152

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
             KE   L L  F AGR+RLEN+G   LA+VFK++K+LE +E+PQNGI   G+ AL  A 
Sbjct: 153 --KENLDLKLVQFSAGRDRLENKGITALASVFKEMKSLEVIEVPQNGIKKDGMLALLTAL 210

Query: 346 EEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
           +EN + L+ ++++DN +  + A  L + + K  +L  LN+ D  + +  A  + + L D+
Sbjct: 211 KENAETLKEIHVHDNWVKGEAADRLAELIYKAKTLQKLNISDSDMGTNAAYLVIRALHDS 270

Query: 405 TTLED--VNLTCN 415
           + + +      CN
Sbjct: 271 SAVRESLTEFYCN 283



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 3/106 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           LA+VFK++K+LE +E+PQNGI   G+ AL  A +EN + L+ ++++DN +  + A  L +
Sbjct: 178 LASVFKEMKSLEVIEVPQNGIKKDGMLALLTALKENAETLKEIHVHDNWVKGEAADRLAE 237

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED--VNLTCN 104
            + K  +L  LN+ D  + +  A  + + L D++ + +      CN
Sbjct: 238 LIYKAKTLQKLNISDSDMGTNAAYLVIRALHDSSAVRESLTEFYCN 283


>gi|320170161|gb|EFW47060.1| hypothetical protein CAOG_05004 [Capsaspora owczarzaki ATCC 30864]
          Length = 1342

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 213/471 (45%), Gaps = 85/471 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  +++  + I  VG  A+++A + N  L  L+L+ N I   G   L +A
Sbjct: 18  IAEALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLHLHGNQIGDAGTQALAEA 77

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L    +   GA +IA+ L  NT L  ++L  N+I   G   + +A+K  
Sbjct: 78  LKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGAQAIAEALKVN 137

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L Q+N+  N+ G+ G + + + +K                                  
Sbjct: 138 PTLTQVNLHSNRVGDAGAQAIAEALKV--------------------------------- 164

Query: 182 EGDNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
              N+ L+  D  SN   +A  Q+  ++ + + T             L +LDLS N    
Sbjct: 165 ---NTTLTQLDLFSNEIGDAGAQAIADAVKGNTT-------------LTQLDLSSNKIDR 208

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
           +G + +A+ L+++    L +L L  N +G  G + +++AL       K   +   L++F 
Sbjct: 209 VGAQAIAEALKANTT--LTQLYLQRNQIGDVGAQAIAEAL-------KINTTLTQLELFN 259

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N++ + GA+ +A V K   TL ++++  N +  VG  A+++A + N  L  L+L  N
Sbjct: 260 NQINQVGDVGAQAIAEVLKVNTTLTQLDLRGNQVGDVGAQAIAEALKVNTALIQLDLGWN 319

Query: 360 TITYKGAIPLGQA------------------LSKLPSLAILNLGDCLLKSAGASSIAKYL 401
            +   GA  +  A                  L+K  S+    +GD     AGA S+++ L
Sbjct: 320 KVGDAGAQAIADALKGNTALIQLVSTSEEYDLAKPQSVDSNRVGD-----AGARSVSEAL 374

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG--EEGV 450
             NTTL+++NL  N+I   G   + +A++  T L+ +N++EN+ G  EE V
Sbjct: 375 LKNTTLQNLNLWLNQIKDAGARSISEALQKNTTLQNLNLAENRIGYVEETV 425



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 126/239 (52%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L +LDLSD+  G +G + +A+ L+ +    L +L L+ N +G  G + L++AL
Sbjct: 21  ALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTT--LIQLHLHGNQIGDAGTQALAEAL 78

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      + L L+     RN++ + GA+ +A   K    L ++ + +N I HVG  
Sbjct: 79  -----KVNTTLTQLHLQ-----RNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGAQ 128

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + N  L  +NL+ N +   GA  + +AL    +L  L+L    +  AGA +IA 
Sbjct: 129 AIAEALKVNPTLTQVNLHSNRVGDAGAQAIAEALKVNTTLTQLDLFSNEIGDAGAQAIAD 188

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +  NTTL  ++L+ N+I   G   + +A+K  T L Q+ +  NQ G+ G + + + +K
Sbjct: 189 AVKGNTTLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEALK 247



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 173/385 (44%), Gaps = 74/385 (19%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           A +IA+ L  NTTL  ++L+ ++I   G   + +A+K  T L Q+++  NQ G+ G + +
Sbjct: 15  AQAIAEALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLHLHGNQIGDAGTQAL 74

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
            + +K                                     N+ L+            Q
Sbjct: 75  AEALKV------------------------------------NTTLT------------Q 86

Query: 203 SHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK 261
            H   NQ  +   Q+   +LK    L++L L  N  G +G + +A+ L+ +    L ++ 
Sbjct: 87  LHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGAQAIAEALKVNPT--LTQVN 144

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
           L++N +G  G + +++AL       K   +   L +F    N + + GA+ +A   K   
Sbjct: 145 LHSNRVGDAGAQAIAEAL-------KVNTTLTQLDLF---SNEIGDAGAQAIADAVKGNT 194

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL---SKLPS 378
           TL ++++  N I  VG  A+++A + N  L  L L  N I   GA  + +AL   + L  
Sbjct: 195 TLTQLDLSSNKIDRVGAQAIAEALKANTTLTQLYLQRNQIGDVGAQAIAEALKINTTLTQ 254

Query: 379 LAILN-----LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
           L + N     +GD      GA +IA+ L  NTTL  ++L  N++   G   + +A+K  T
Sbjct: 255 LELFNNQINQVGDV-----GAQAIAEVLKVNTTLTQLDLRGNQVGDVGAQAIAEALKVNT 309

Query: 434 KLKQINVSENQFGEEGVEEMEKLMK 458
            L Q+++  N+ G+ G + +   +K
Sbjct: 310 ALIQLDLGWNKVGDAGAQAIADALK 334



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 81/156 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
            ++ ++ A+ +A   K   TL ++++  + I  VG  A+++A + N  L  L+L+ N I 
Sbjct: 8   QKIGDDEAQAIAEALKVNTTLTQLDLSDDKIGDVGAQAIAEALKVNTTLIQLHLHGNQIG 67

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   L +AL    +L  L+L    +   GA +IA+ L  NT L  ++L  N+I   G 
Sbjct: 68  DAGTQALAEALKVNTTLTQLHLQRNQIGHVGAQAIAEALKVNTALIQLHLQRNQIGHVGA 127

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A+K    L Q+N+  N+ G+ G + + + +K
Sbjct: 128 QAIAEALKVNPTLTQVNLHSNRVGDAGAQAIAEALK 163


>gi|194382764|dbj|BAG64552.1| unnamed protein product [Homo sapiens]
          Length = 373

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 1/140 (0%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDC
Sbjct: 1   MPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDC 60

Query: 77  LLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
           L++S GA +IA  +      L+++NL+  EI     L + +AM +K +L++++++ N  G
Sbjct: 61  LVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLG 120

Query: 136 EEGVEEMEKLMKSFGMAAAL 155
           EEG E+++++++ F MA  L
Sbjct: 121 EEGCEQLQEVLEGFNMAKVL 140



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 1/140 (0%)

Query: 328 MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
           MPQNGI H GITAL+ AF  N  LR +NLNDNT T KGA+ + + L  L  + ++N GDC
Sbjct: 1   MPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDC 60

Query: 388 LLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
           L++S GA +IA  +      L+++NL+  EI     L + +AM +K +L++++++ N  G
Sbjct: 61  LVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLG 120

Query: 447 EEGVEEMEKLMKSFGMAAAL 466
           EEG E+++++++ F MA  L
Sbjct: 121 EEGCEQLQEVLEGFNMAKVL 140


>gi|183985790|gb|AAI66378.1| LOC100158644 protein [Xenopus (Silurana) tropicalis]
          Length = 566

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 205/459 (44%), Gaps = 40/459 (8%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFE-ENKKLRHLNLNDNTITYKGAIPLGQALS 63
           +  +L+   ++ M  NG   V +  L+     ++  ++ ++L +N ++ +G   LG+AL 
Sbjct: 133 LLPQLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALM 192

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
              +LA+L+L    +  +GA ++A+ L  N  L  +NL  N+I  +G   L +++    K
Sbjct: 193 VNRTLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRK 252

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED----DEGECSDEEQDEESEEENDS 179
           L+ +N+ +N  G EGVE +   +K   +   L L      D G  +  E  + + + +  
Sbjct: 253 LRALNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTL 312

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
           D + +    S +D   S   S  S N S                   L  L+L +N+ G 
Sbjct: 313 DLQSN----SISDRGLSLLTSGLSQNRS-------------------LKHLNLRENSIGI 349

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
            G + LA+ LR +    L  L L  N L   G + L++AL    E+   E   L      
Sbjct: 350 EGAQALAESLRRNS--TLLHLDLTANLLHDEGMEALARALR---ENQSLESLHLQW---- 400

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N L    A+ LAA  +  K L  +++ +N +   G  ALSDA +EN  L  L L   
Sbjct: 401 ---NFLRVASARYLAAALRVNKALRCLDLQENALGDEGAAALSDALKENNTLSALYLQGT 457

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            I   G   L  AL+   SL  L+L    +   GA ++A  L  N TL+ +NL  N I +
Sbjct: 458 MIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQENSIVL 517

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            G + L  A+   + L  +++  N  G+ G + +   +K
Sbjct: 518 DGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISDTIK 556



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 24/263 (9%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH------ 280
           L  LDL  N  GP G   LA++LRS+    L  L L NN +   G + L+++L       
Sbjct: 197 LAVLDLHSNNIGPSGAMALAEVLRSN--QVLLSLNLQNNQIKSEGAQFLAQSLLANRKLR 254

Query: 281 --------------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
                         +    S K+   L  +++++G N + + GA  LA   K    L  +
Sbjct: 255 ALNIQKNNIGAEGVESLSGSLKQNQVLQ-ELWLSG-NSVGDRGAAALAEALKSNSKLSTL 312

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
           ++  N I   G++ L+    +N++L+HLNL +N+I  +GA  L ++L +  +L  L+L  
Sbjct: 313 DLQSNSISDRGLSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTA 372

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
            LL   G  ++A+ L +N +LE ++L  N + V     L  A++    L+ +++ EN  G
Sbjct: 373 NLLHDEGMEALARALRENQSLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALG 432

Query: 447 EEGVEEMEKLMKSFGMAAALVLE 469
           +EG   +   +K     +AL L+
Sbjct: 433 DEGAAALSDALKENNTLSALYLQ 455



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 82/157 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K    L  +++  N I   G++ L+    +N+ L+HLNL +N+I  +GA  L ++
Sbjct: 299 LAEALKSNSKLSTLDLQSNSISDRGLSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAES 358

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  L+L   LL   G  ++A+ L +N +LE ++L  N + V     L  A++  
Sbjct: 359 LRRNSTLLHLDLTANLLHDEGMEALARALRENQSLESLHLQWNFLRVASARYLAAALRVN 418

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L+ +++ EN  G+EG   +   +K     +AL L+
Sbjct: 419 KALRCLDLQENALGDEGAAALSDALKENNTLSALYLQ 455



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 36/237 (15%)

Query: 239 PIGVEGLADLLRSS--C--------CFAL-------------EELKLNNNGLGITGCKLL 275
           P+G   LA LLR+S  C        C +                L++ NNG      +LL
Sbjct: 99  PLGCCALAYLLRASNICAQEANLSQCLSFNLVQRLLPQLQYCTNLRMENNGFQDVVMELL 158

Query: 276 SKALH--DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           +  L   DC           A++      NRL N G K L       +TL  +++  N I
Sbjct: 159 ASILRAKDC-----------AIQRISLAENRLSNRGVKALGRALMVNRTLAVLDLHSNNI 207

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G  AL++    N+ L  LNL +N I  +GA  L Q+L     L  LN+    + + G
Sbjct: 208 GPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNIGAEG 267

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
             S++  L  N  L+++ L+ N +  +G   L +A+K+ +KL  +++  N   + G+
Sbjct: 268 VESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQSNSISDRGL 324



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 6/162 (3%)

Query: 304 RLENEGAK-----MLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
           R+EN G +     +LA++ + K   ++R+ + +N + + G+ AL  A   N+ L  L+L+
Sbjct: 144 RMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNRTLAVLDLH 203

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N I   GA+ L + L     L  LNL +  +KS GA  +A+ L  N  L  +N+  N I
Sbjct: 204 SNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNI 263

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +G   L  ++K    L+++ +S N  G+ G   + + +KS
Sbjct: 264 GAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKS 305


>gi|448122943|ref|XP_004204570.1| Piso0_000423 [Millerozyma farinosa CBS 7064]
 gi|448125215|ref|XP_004205128.1| Piso0_000423 [Millerozyma farinosa CBS 7064]
 gi|358249761|emb|CCE72827.1| Piso0_000423 [Millerozyma farinosa CBS 7064]
 gi|358350109|emb|CCE73388.1| Piso0_000423 [Millerozyma farinosa CBS 7064]
          Length = 436

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 121/227 (53%), Gaps = 8/227 (3%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  ++LSDNAFG   ++ + + L  +   ++E L L+NNG+G      + ++L+   ++ 
Sbjct: 129 LKTVNLSDNAFGLQTIDPIEEYLAKAV--SIEHLILSNNGMGPFAGARIGQSLYKLAQAK 186

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDAF 345
           K  G   +LK F+ GRNRLEN     LA   +  + LE V + QNGI   GI  L     
Sbjct: 187 KSSGKQ-SLKTFVCGRNRLENGSTDYLAIGLRNHENLEVVRLYQNGIRPAGIMKLIKYGL 245

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
             NK+L+ L+L DNT T   +  L ++LS    L  +N+ DCLLK  G+ S+ K L++  
Sbjct: 246 SLNKHLQVLDLQDNTFTANASDALAESLSSWKDLREINVNDCLLKPKGSVSLLKELSEGP 305

Query: 406 T---LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
           T      + L  NE+       LVKA+K K   L+ + ++ N+F EE
Sbjct: 306 TRSSFTTLKLQYNELEADSFQYLVKAIKEKLPNLQILELNGNRFEEE 352



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA   +  + LE V + QNGI   GI  L       NK L+ L+L DNT T   +  L +
Sbjct: 212 LAIGLRNHENLEVVRLYQNGIRPAGIMKLIKYGLSLNKHLQVLDLQDNTFTANASDALAE 271

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT---LEDVNLTCNEISVQGGLDLVKA 117
           +LS    L  +N+ DCLLK  G+ S+ K L++  T      + L  NE+       LVKA
Sbjct: 272 SLSSWKDLREINVNDCLLKPKGSVSLLKELSEGPTRSSFTTLKLQYNELEADSFQYLVKA 331

Query: 118 MKNK-TKLKQINVSENQFGEE 137
           +K K   L+ + ++ N+F EE
Sbjct: 332 IKEKLPNLQILELNGNRFEEE 352


>gi|169623989|ref|XP_001805401.1| hypothetical protein SNOG_15244 [Phaeosphaeria nodorum SN15]
 gi|111056349|gb|EAT77469.1| hypothetical protein SNOG_15244 [Phaeosphaeria nodorum SN15]
          Length = 426

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 116/227 (51%), Gaps = 10/227 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           +DLSDNAFG   V  L D L  S    L  L LNNNGLG     L++ AL       E++
Sbjct: 100 VDLSDNAFGLNTVAPLVDFL--SQHTPLRYLYLNNNGLGPAAGVLVADALTALAAKKEAA 157

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
           +KEG  +  L++ I GRNRLE    +  A  +     ++ ++M QNGI   GIT  L+  
Sbjct: 158 RKEGKQVPDLELVICGRNRLETGSMQAWAKAYAANSGVKTIKMTQNGIRQEGITHLLAHG 217

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
                 L  L+L DNT T  GA  LG  + K   +  L +GDCLL   G  ++A  L   
Sbjct: 218 LSHLSKLETLDLQDNTFTAMGANALGSVVGKWTEMRELGVGDCLLGGRGGVALASALAKG 277

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
            N  LE + L  N+I+ +G   L  A  +    L+++ ++ N+FGE+
Sbjct: 278 QNKKLEVLRLQFNDINAKGLAGLTSAASSSLPALRRVELNGNKFGED 324



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 13/162 (8%)

Query: 15  VEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           ++M QNGI   GIT  L+       KL  L+L DNT T  GA  LG  + K   +  L +
Sbjct: 198 IKMTQNGIRQEGITHLLAHGLSHLSKLETLDLQDNTFTAMGANALGSVVGKWTEMRELGV 257

Query: 74  GDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVS 130
           GDCLL   G  ++A  L    N  LE + L  N+I+ +G   L  A  +    L+++ ++
Sbjct: 258 GDCLLGGRGGVALASALAKGQNKKLEVLRLQFNDINAKGLAGLTSAASSSLPALRRVELN 317

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
            N+FGE+    ++KL +        VL+  + E  + E DEE
Sbjct: 318 GNKFGEDD-SSIDKLRE--------VLDARKEESGEHEDDEE 350


>gi|303321726|ref|XP_003070857.1| Leucine Rich Repeat family protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110554|gb|EER28712.1| Leucine Rich Repeat family protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|320040344|gb|EFW22277.1| ran GTPase-activating protein 1 [Coccidioides posadasii str.
           Silveira]
          Length = 426

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 121/245 (49%), Gaps = 16/245 (6%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD-CYES 285
           L  +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + C   
Sbjct: 99  LQTVDLSDNAFGLNTQAPLVEFLQAHV--PLRHLLLNNNGLGPKAGTLIADALTELCARK 156

Query: 286 SKKEGSP------LALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGI 338
            K   +P        L+  + GRNRLE+      A   K   K L  V+M QNGI   GI
Sbjct: 157 IKARSNPDLGYEVPLLETIVCGRNRLESGSMAAWARAIKAHGKGLRVVKMVQNGIRQDGI 216

Query: 339 TALSD-AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
             L D        L  L+L DNT T  GAI L   ++  PS+  L+LGDC LK  G   +
Sbjct: 217 KLLLDHGLRHAPELELLDLQDNTFTVSGAIILADTVTGWPSIRELSLGDCYLKGRGWIKV 276

Query: 398 AKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGE--EGVEE 452
            K +   +N  LE + L  N+I+  G   LV A KN    L++I ++ N+F E  E + E
Sbjct: 277 GKAIAKGNNKKLEILRLMYNDINAAGLQILVHAAKNALPLLRRIELNGNKFDEDDESIVE 336

Query: 453 MEKLM 457
           + +L+
Sbjct: 337 LRELL 341



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 18/169 (10%)

Query: 10  KTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  V+M QNGI   GI  L D       +L  L+L DNT T  GAI L   ++  PS+
Sbjct: 199 KGLRVVKMVQNGIRQDGIKLLLDHGLRHAPELELLDLQDNTFTVSGAIILADTVTGWPSI 258

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
             L+LGDC LK  G   + K +   +N  LE + L  N+I+  G   LV A KN    L+
Sbjct: 259 RELSLGDCYLKGRGWIKVGKAIAKGNNKKLEILRLMYNDINAAGLQILVHAAKNALPLLR 318

Query: 126 QINVSENQFGE--EGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           +I ++ N+F E  E + E+ +L+            D+  E   +E DEE
Sbjct: 319 RIELNGNKFDEDDESIVELRELL------------DERKEARGKEDDEE 355


>gi|50421377|ref|XP_459238.1| DEHA2D17292p [Debaryomyces hansenii CBS767]
 gi|49654905|emb|CAG87410.1| DEHA2D17292p [Debaryomyces hansenii CBS767]
          Length = 414

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 132/241 (54%), Gaps = 10/241 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ +   L  +   +++ L L+NNG+G      + K+L+   ++ K +
Sbjct: 110 INLSDNAFGLQTIDPIEKYLAKAV--SVQHLILSNNGMGPFAGARIGKSLYKLSQAKKSQ 167

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDAFEEN 348
           G   +L+ FI GRNRLEN     L+   +  + L+ V++ QNGI   GI  L  +   +N
Sbjct: 168 GKS-SLRTFICGRNRLENGSTNYLSIGLRNHEDLQIVKLYQNGIRPSGIMNLIKNGLSQN 226

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
           + L+ ++L DNT+T K ++ L  ALS    L  LNL DCLLK  G+  + + L +    E
Sbjct: 227 RKLQIIDLQDNTLTTKASVVLANALSNWNDLQELNLNDCLLKPHGSLKLCQALEEGMIRE 286

Query: 409 D---VNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEG--VEEMEKLMKSFGM 462
               + L  NE+       L+ A++ K  KLK + ++ N+F E+   +E++ ++ ++ GM
Sbjct: 287 KFTTLKLQYNELEASSLDHLLAAVEKKLPKLKSLELNGNRFEEDAAFIEKVNEIFENRGM 346

Query: 463 A 463
            
Sbjct: 347 G 347



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 7/148 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ V++ QNGI   GI  L  +   +N+KL+ ++L DNT+T K ++ L  ALS    L  
Sbjct: 200 LQIVKLYQNGIRPSGIMNLIKNGLSQNRKLQIIDLQDNTLTTKASVVLANALSNWNDLQE 259

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLED---VNLTCNEISVQGGLDLVKAMKNK-TKLKQ 126
           LNL DCLLK  G+  + + L +    E    + L  NE+       L+ A++ K  KLK 
Sbjct: 260 LNLNDCLLKPHGSLKLCQALEEGMIREKFTTLKLQYNELEASSLDHLLAAVEKKLPKLKS 319

Query: 127 INVSENQFGEEG--VEEMEKLMKSFGMA 152
           + ++ N+F E+   +E++ ++ ++ GM 
Sbjct: 320 LELNGNRFEEDAAFIEKVNEIFENRGMG 347


>gi|301605721|ref|XP_002932504.1| PREDICTED: protein NLRC3 [Xenopus (Silurana) tropicalis]
          Length = 1071

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 207/463 (44%), Gaps = 40/463 (8%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFE-ENKKLRHLNLNDNTITYKGAIPLG 59
            ++  +  +L+   ++ M  NG   V +  L+     ++  ++ ++L +N ++ +G   LG
Sbjct: 634  LVQRLLPQLQYCTNLRMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALG 693

Query: 60   QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
            +AL    +LA+L+L    +  +GA ++A+ L  N  L  +NL  N+I  +G   L +++ 
Sbjct: 694  RALMVNRTLAVLDLHSNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLL 753

Query: 120  NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED----DEGECSDEEQDEESEE 175
               KL+ +N+ +N  G EGVE +   +K   +   L L      D G  +  E  + + +
Sbjct: 754  ANRKLRALNIQKNNIGAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSK 813

Query: 176  ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
             +  D + +    S +D   S   S  S N S                   L  L+L +N
Sbjct: 814  LSTLDLQSN----SISDRGLSLLTSGLSQNRS-------------------LKHLNLREN 850

Query: 236  AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
            + G  G + LA+ LR +    L  L L  N L   G + L++AL    E+   E   L  
Sbjct: 851  SIGIEGAQALAESLRRNS--TLLHLDLTANLLHDEGMEALARALR---ENQSLESLHLQW 905

Query: 296  KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
                   N L    A+ LAA  +  K L  +++ +N +   G  ALSDA +EN  L  L 
Sbjct: 906  -------NFLRVASARYLAAALRVNKALRCLDLQENALGDEGAAALSDALKENNTLSALY 958

Query: 356  LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
            L    I   G   L  AL+   SL  L+L    +   GA ++A  L  N TL+ +NL  N
Sbjct: 959  LQGTMIGASGTQSLANALAVNRSLKTLDLRGNNIGLRGAKALAGALKINNTLQSLNLQEN 1018

Query: 416  EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             I + G + L  A+   + L  +++  N  G+ G + +   +K
Sbjct: 1019 SIVLDGAICLANAVSGNSSLTSLSLQGNHIGQSGAKVISDTIK 1061



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 24/263 (9%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH------ 280
           L  LDL  N  GP G   LA++LRS+    L  L L NN +   G + L+++L       
Sbjct: 702 LAVLDLHSNNIGPSGAMALAEVLRSN--QVLLSLNLQNNQIKSEGAQFLAQSLLANRKLR 759

Query: 281 --------------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
                         +    S K+   L  +++++G N + + GA  LA   K    L  +
Sbjct: 760 ALNIQKNNIGAEGVESLSGSLKQNQVLQ-ELWLSG-NSVGDRGAAALAEALKSNSKLSTL 817

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
           ++  N I   G++ L+    +N++L+HLNL +N+I  +GA  L ++L +  +L  L+L  
Sbjct: 818 DLQSNSISDRGLSLLTSGLSQNRSLKHLNLRENSIGIEGAQALAESLRRNSTLLHLDLTA 877

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
            LL   G  ++A+ L +N +LE ++L  N + V     L  A++    L+ +++ EN  G
Sbjct: 878 NLLHDEGMEALARALRENQSLESLHLQWNFLRVASARYLAAALRVNKALRCLDLQENALG 937

Query: 447 EEGVEEMEKLMKSFGMAAALVLE 469
           +EG   +   +K     +AL L+
Sbjct: 938 DEGAAALSDALKENNTLSALYLQ 960



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 36/237 (15%)

Query: 239 PIGVEGLADLLRSS--C--------CFAL-------------EELKLNNNGLGITGCKLL 275
           P+G   LA LLR+S  C        C +                L++ NNG      +LL
Sbjct: 604 PLGCCALAYLLRASNICAQEANLSQCLSFNLVQRLLPQLQYCTNLRMENNGFQDVVMELL 663

Query: 276 SKALH--DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           +  L   DC           A++      NRL N G K L       +TL  +++  N I
Sbjct: 664 ASILRAKDC-----------AIQRISLAENRLSNRGVKALGRALMVNRTLAVLDLHSNNI 712

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G  AL++    N+ L  LNL +N I  +GA  L Q+L     L  LN+    + + G
Sbjct: 713 GPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNIGAEG 772

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
             S++  L  N  L+++ L+ N +  +G   L +A+K+ +KL  +++  N   + G+
Sbjct: 773 VESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKSNSKLSTLDLQSNSISDRGL 829



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 6/162 (3%)

Query: 304 RLENEGAK-----MLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
           R+EN G +     +LA++ + K   ++R+ + +N + + G+ AL  A   N+ L  L+L+
Sbjct: 649 RMENNGFQDVVMELLASILRAKDCAIQRISLAENRLSNRGVKALGRALMVNRTLAVLDLH 708

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N I   GA+ L + L     L  LNL +  +KS GA  +A+ L  N  L  +N+  N I
Sbjct: 709 SNNIGPSGAMALAEVLRSNQVLLSLNLQNNQIKSEGAQFLAQSLLANRKLRALNIQKNNI 768

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +G   L  ++K    L+++ +S N  G+ G   + + +KS
Sbjct: 769 GAEGVESLSGSLKQNQVLQELWLSGNSVGDRGAAALAEALKS 810


>gi|407918631|gb|EKG11900.1| Leucine-rich repeat ribonuclease inhibitor subtype [Macrophomina
           phaseolina MS6]
          Length = 421

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 127/249 (51%), Gaps = 19/249 (7%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH---DC 282
           +L  +DLSDNAFG      L   L  S    L  L LNNNGLG     L++ AL    D 
Sbjct: 96  KLETVDLSDNAFGLNTQAPLVSFL--SAHTPLRHLYLNNNGLGPAAGVLIADALSTLADK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E+++K  + +  L+  I GRNRLEN   +  A  + K   L  ++M QNGI   GIT  
Sbjct: 154 KEAARKMDADVPYLETVICGRNRLENGSMEAWARAYSKHTGLHEIKMVQNGIRQEGITHL 213

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L +       LR L+L DNT T  GA  L   +   P+L  L + DC L++ G+  ++K 
Sbjct: 214 LRNGLVHQSKLRILDLQDNTFTTTGARALADIIGGFPNLRELGISDCYLQAKGSLLLSKA 273

Query: 401 LTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKT-----KLKQINVSENQFGEEGVEEM 453
           L +  N  LE + +  N+++  G    +KA  +       KL++  V+ N+F E+  E +
Sbjct: 274 LAEGKNPELEILRMQYNDMNAAG----LKAFADANEKVLLKLRRFEVNGNKFSEDD-ESV 328

Query: 454 EKLMKSFGM 462
           E+L ++F +
Sbjct: 329 ERLQEAFSL 337



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 13/158 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  + K   L  ++M QNGI   GIT  L +      KLR L+L DNT T  GA  L  
Sbjct: 185 WARAYSKHTGLHEIKMVQNGIRQEGITHLLRNGLVHQSKLRILDLQDNTFTTTGARALAD 244

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAM 118
            +   P+L  L + DC L++ G+  ++K L +  N  LE + +  N+++  G    +KA 
Sbjct: 245 IIGGFPNLRELGISDCYLQAKGSLLLSKALAEGKNPELEILRMQYNDMNAAG----LKAF 300

Query: 119 KNKT-----KLKQINVSENQFGEEGVEEMEKLMKSFGM 151
            +       KL++  V+ N+F E+  E +E+L ++F +
Sbjct: 301 ADANEKVLLKLRRFEVNGNKFSEDD-ESVERLQEAFSL 337


>gi|119195909|ref|XP_001248558.1| hypothetical protein CIMG_02329 [Coccidioides immitis RS]
 gi|392862237|gb|EAS37135.2| ran GTPase activating protein 1 [Coccidioides immitis RS]
          Length = 424

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 121/245 (49%), Gaps = 16/245 (6%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD-CYES 285
           L  +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + C   
Sbjct: 99  LQTVDLSDNAFGLNTQAPLVEFLQAHV--PLRHLLLNNNGLGPKAGTLIADALTELCARK 156

Query: 286 SKKEGSP------LALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGI 338
            K   +P        L+  + GRNRLE+      A   K   K L  V+M QNGI   GI
Sbjct: 157 IKARSNPDLGYEVPLLETIVCGRNRLESGSMAAWARAIKAHGKGLRVVKMVQNGIRQDGI 216

Query: 339 TALSD-AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
             L D        L  L+L DNT T  GAI L   ++  PS+  L+LGDC LK  G   +
Sbjct: 217 KLLLDHGLRHAPELELLDLQDNTFTVSGAIILADTVTGWPSIRELSLGDCYLKGRGWIKV 276

Query: 398 AKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGE--EGVEE 452
            K +   +N  LE + L  N+I+  G   L+ A KN    L++I ++ N+F E  E + E
Sbjct: 277 GKAIAKGNNKKLEILRLMYNDINAAGLQILLHAAKNALPLLRRIELNGNKFDEDDESIVE 336

Query: 453 MEKLM 457
           + +L+
Sbjct: 337 LRELL 341



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 18/169 (10%)

Query: 10  KTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  V+M QNGI   GI  L D       +L  L+L DNT T  GAI L   ++  PS+
Sbjct: 199 KGLRVVKMVQNGIRQDGIKLLLDHGLRHAPELELLDLQDNTFTVSGAIILADTVTGWPSI 258

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
             L+LGDC LK  G   + K +   +N  LE + L  N+I+  G   L+ A KN    L+
Sbjct: 259 RELSLGDCYLKGRGWIKVGKAIAKGNNKKLEILRLMYNDINAAGLQILLHAAKNALPLLR 318

Query: 126 QINVSENQFGE--EGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           +I ++ N+F E  E + E+ +L+            D+  E   +E DEE
Sbjct: 319 RIELNGNKFDEDDESIVELRELL------------DERKEARGKEDDEE 355


>gi|119492708|ref|XP_001263673.1| ran GTPase activating protein 1 (RNA1 protein) [Neosartorya
           fischeri NRRL 181]
 gi|119411833|gb|EAW21776.1| ran GTPase activating protein 1 (RNA1 protein) [Neosartorya
           fischeri NRRL 181]
          Length = 420

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 126/242 (52%), Gaps = 15/242 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES---S 286
           ++LSDNAFG      L D L  S    L  L LNNNGLG     L++ AL    E    +
Sbjct: 100 VNLSDNAFGLNTQAPLVDFL--SRHVPLRHLILNNNGLGPAAGTLIADALTKLAERKEEA 157

Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITAL-S 342
           +K G   PL L+  + GRNRLEN   +  A  +K     +  V+M QNGI   GI+ L  
Sbjct: 158 RKAGEEIPL-LESIVCGRNRLENGSMEAWARAYKVHAAGIRSVKMTQNGIRQEGISLLLK 216

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +       L  L+L DNT T  G+  L   ++  PSL  L +GDCLL + G   +A+ L 
Sbjct: 217 EGLRHASALEVLDLQDNTFTIMGSTALAGVVAGWPSLRELGVGDCLLSARGGVKVAQALA 276

Query: 403 D--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLM 457
           +  N +++ + L  NEI+ +G    + A K     L++I ++ N+F EE   V E+++++
Sbjct: 277 EGKNQSIQTLRLQYNEITAEGVKLFLHATKTALPSLRRIELNGNKFFEEDPNVTELQEVL 336

Query: 458 KS 459
           ++
Sbjct: 337 EA 338



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI+ L  +       L  L+L DNT T  G+  L   ++  PSL  
Sbjct: 196 IRSVKMTQNGIRQEGISLLLKEGLRHASALEVLDLQDNTFTIMGSTALAGVVAGWPSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +A+ L +  N +++ + L  NEI+ +G    + A K     L++I
Sbjct: 256 LGVGDCLLSARGGVKVAQALAEGKNQSIQTLRLQYNEITAEGVKLFLHATKTALPSLRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N+F EE   V E+++++++
Sbjct: 316 ELNGNKFFEEDPNVTELQEVLEA 338


>gi|67537384|ref|XP_662466.1| hypothetical protein AN4862.2 [Aspergillus nidulans FGSC A4]
 gi|40741750|gb|EAA60940.1| hypothetical protein AN4862.2 [Aspergillus nidulans FGSC A4]
 gi|259482275|tpe|CBF76601.1| TPA: Ran specific GTPase activating protein An-RanGAP (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 417

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 123/242 (50%), Gaps = 15/242 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG    + L D L  S    L  L LNNNG+G      ++KAL +  +  ++ 
Sbjct: 100 INLSDNAFGANTQKPLVDFL--SRHIPLRHLVLNNNGMGPEAGSNIAKALTELAQRKEEA 157

Query: 290 GS-----PLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT-ALS 342
            S     PL L+  + GRNRLEN      A  +K     +  V+M QNGI   GI+  L 
Sbjct: 158 RSGGKEVPL-LESIVCGRNRLENGSMAAWAHAYKAHAAGIRSVKMTQNGIRQEGISHLLK 216

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           +       L  L+L DNT T  G+  L   +S  PSL  L +GDCLL + G   +A+ L 
Sbjct: 217 EGLSHASALEVLDLQDNTFTITGSTALAGVVSGWPSLRELGVGDCLLSARGGIKLAQALA 276

Query: 402 -TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLM 457
              N  +E + L  N+IS +G    + A K     L++I ++ N+F EE   V E+ +L+
Sbjct: 277 KAKNQKVEILRLQYNDISAEGVKQFLHAAKTALPALRRIELNGNKFQEEDVNVTELSELL 336

Query: 458 KS 459
           +S
Sbjct: 337 ES 338



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI+  L +       L  L+L DNT T  G+  L   +S  PSL  
Sbjct: 196 IRSVKMTQNGIRQEGISHLLKEGLSHASALEVLDLQDNTFTITGSTALAGVVSGWPSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +A+ L    N  +E + L  N+IS +G    + A K     L++I
Sbjct: 256 LGVGDCLLSARGGIKLAQALAKAKNQKVEILRLQYNDISAEGVKQFLHAAKTALPALRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N+F EE   V E+ +L++S
Sbjct: 316 ELNGNKFQEEDVNVTELSELLES 338


>gi|258575445|ref|XP_002541904.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237902170|gb|EEP76571.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 422

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 120/242 (49%), Gaps = 16/242 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD-CYESSKK 288
           +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + C   +K 
Sbjct: 102 VDLSDNAFGLNTQAPLVEFLQAH--LPLRHLLLNNNGLGPKAGTLIADALTELCARKAKA 159

Query: 289 EGSP------LALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITAL 341
              P        L+  + GRNRLE+      A   K   K L  V+M QNGI   GIT L
Sbjct: 160 RSDPDVGYEVPLLETIVCGRNRLESGSMAAWARAIKDNGKGLRTVKMVQNGIRQDGITLL 219

Query: 342 SD-AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            D        L  L++ DNT T  GA  L   ++  PSL  L+LGDC LK  G   + K 
Sbjct: 220 LDHGLRHAPELEILDMQDNTFTAIGARVLADTVTGWPSLRELSLGDCYLKGRGWLRVGKA 279

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGE--EGVEEMEK 455
           +   +N  +E + L  N+I+  G   LV A KN    L+++ ++ N+F E  E + E+ +
Sbjct: 280 IAQGNNAKIEILRLMYNDINAAGLKVLVHAAKNALPILRRVELNGNKFEEDDESIVELRE 339

Query: 456 LM 457
           L+
Sbjct: 340 LL 341



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 6/143 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  V+M QNGI   GIT L D       +L  L++ DNT T  GA  L   ++  PSL
Sbjct: 199 KGLRTVKMVQNGIRQDGITLLLDHGLRHAPELEILDMQDNTFTAIGARVLADTVTGWPSL 258

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
             L+LGDC LK  G   + K +   +N  +E + L  N+I+  G   LV A KN    L+
Sbjct: 259 RELSLGDCYLKGRGWLRVGKAIAQGNNAKIEILRLMYNDINAAGLKVLVHAAKNALPILR 318

Query: 126 QINVSENQFGE--EGVEEMEKLM 146
           ++ ++ N+F E  E + E+ +L+
Sbjct: 319 RVELNGNKFEEDDESIVELRELL 341



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 31/210 (14%)

Query: 259 ELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
           E+ L  N  G+  C+LLSKAL       KK  +     +F +   RL +E  + L+ +  
Sbjct: 39  EIHLGGNTYGVPACELLSKALR----VQKKLHTANLADIFTS---RLLSEIPQALSFLLN 91

Query: 319 KL---KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
            L    TL+ V++  N         L +  + +  LRHL LN+N +  K    +  AL++
Sbjct: 92  ALLEVHTLQTVDLSDNAFGLNTQAPLVEFLQAHLPLRHLLLNNNGLGPKAGTLIADALTE 151

Query: 376 L-----------------PSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEI 417
           L                 P L  +  G   L+S   ++ A+ + DN   L  V +  N I
Sbjct: 152 LCARKAKARSDPDVGYEVPLLETIVCGRNRLESGSMAAWARAIKDNGKGLRTVKMVQNGI 211

Query: 418 SVQGGLDLV--KAMKNKTKLKQINVSENQF 445
             Q G+ L+    +++  +L+ +++ +N F
Sbjct: 212 R-QDGITLLLDHGLRHAPELEILDMQDNTF 240


>gi|46445898|ref|YP_007263.1| hypothetical protein pc0264 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46399539|emb|CAF22988.1| hypothetical protein pc0264 [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1805

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 200/439 (45%), Gaps = 41/439 (9%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            G   L+ +   N  L+ L+L+ N I+ KGA  + QAL+   +L  L L    +   GA +
Sbjct: 1356 GAEVLAHSLASNTTLKSLDLDRNQISDKGAEAIAQALASNAALETLWLNGNQISDKGAEA 1415

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            IA+ L  N  L  ++L  N+IS QG     +A+ + T L  ++++ NQ  ++G       
Sbjct: 1416 IAQSLASNAALWKLSLNGNQISDQGMEAFAQALASNTILMDLSLNGNQISDQG------- 1468

Query: 146  MKSFGMAAA-----LVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS 200
            MK+F  A A      VL  +E + SD+E       E  + A   N+++     N      
Sbjct: 1469 MKAFAQALASNTSIRVLSLNENQISDKEM------EAFAQALASNTSIGVLSLN-----G 1517

Query: 201  NQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEEL 260
            NQ  +   ++   +  S+ +L+T      L L +N     G+E  A  L S+    +  L
Sbjct: 1518 NQISDKGMEAFAQALASNTTLRT------LRLDNNQISDKGMEAFAQALASNTSIGV--L 1569

Query: 261  KLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
             LN N +   G   L++AL     +S    S L+L       N++ ++G +  A      
Sbjct: 1570 SLNGNQISDKGIVALAQAL-----ASNTILSELSL-----NENQISDQGMEAFAQALASN 1619

Query: 321  KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
              L  + +  N I   G+ A + A   N  L  L+LN N I+ +G     QAL+   +L 
Sbjct: 1620 TALRALRLDNNQISDKGMEAFAQALASNTILSELSLNGNQISDQGMEAFAQALASNITLR 1679

Query: 381  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
             L L +  +   G  + A+ L  NTTL  + L  N+IS +G     + M + T ++ +++
Sbjct: 1680 ALRLDNNQISDQGMEAFAQTLASNTTLRALRLDNNQISDKGMEAFAQTMASNTSIRVLSL 1739

Query: 441  SENQFGEEGVEEMEKLMKS 459
            + NQ  ++G++   + + S
Sbjct: 1740 NGNQISDQGMKAFAQTLVS 1758



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 205/456 (44%), Gaps = 40/456 (8%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            TL+ +++ +N I   G  A++ A   N  L  L LN N I+ KGA  + Q+L+   +L  
Sbjct: 1369 TLKSLDLDRNQISDKGAEAIAQALASNAALETLWLNGNQISDKGAEAIAQSLASNAALWK 1428

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    +   G  + A+ L  NT L D++L  N+IS QG     +A+ + T ++ ++++
Sbjct: 1429 LSLNGNQISDQGMEAFAQALASNTILMDLSLNGNQISDQGMKAFAQALASNTSIRVLSLN 1488

Query: 131  ENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            ENQ  ++   EME   ++     ++ VL  +  + SD+        E  + A   N+ L 
Sbjct: 1489 ENQISDK---EMEAFAQALASNTSIGVLSLNGNQISDKGM------EAFAQALASNTTLR 1539

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                ++     NQ  +   ++   +  S+ S+        L L+ N     G+  LA  L
Sbjct: 1540 TLRLDN-----NQISDKGMEAFAQALASNTSIGV------LSLNGNQISDKGIVALAQAL 1588

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
             S+    L EL LN N +   G +  ++AL           S  AL+      N++ ++G
Sbjct: 1589 ASNTI--LSELSLNENQISDQGMEAFAQAL----------ASNTALRALRLDNNQISDKG 1636

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
             +  A        L  + +  N I   G+ A + A   N  LR L L++N I+ +G    
Sbjct: 1637 MEAFAQALASNTILSELSLNGNQISDQGMEAFAQALASNITLRALRLDNNQISDQGMEAF 1696

Query: 370  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
             Q L+   +L  L L +  +   G  + A+ +  NT++  ++L  N+IS QG     + +
Sbjct: 1697 AQTLASNTTLRALRLDNNQISDKGMEAFAQTMASNTSIRVLSLNGNQISDQGMKAFAQTL 1756

Query: 430  KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 465
             + T L  ++++ NQ         +K MK+F    A
Sbjct: 1757 VSNTILMDLSLNGNQIS-------DKRMKAFAQTLA 1785



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 183/407 (44%), Gaps = 31/407 (7%)

Query: 66   PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            P  A +NL +  +   GA  +A  L  NTTL+ ++L  N+IS +G   + +A+ +   L+
Sbjct: 1340 PKFASVNLSNQKISDRGAEVLAHSLASNTTLKSLDLDRNQISDKGAEAIAQALASNAALE 1399

Query: 126  QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
             + ++ NQ  ++G E + + + S   AA   L  +  + SD+        E  + A   N
Sbjct: 1400 TLWLNGNQISDKGAEAIAQSLAS--NAALWKLSLNGNQISDQGM------EAFAQALASN 1451

Query: 186  SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
            + L     N      NQ  +   ++   +  S+ S++       L L++N      +E  
Sbjct: 1452 TILMDLSLN-----GNQISDQGMKAFAQALASNTSIRV------LSLNENQISDKEMEAF 1500

Query: 246  ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
            A  L S+    +  L LN N +   G +  ++AL           S   L+      N++
Sbjct: 1501 AQALASNTSIGV--LSLNGNQISDKGMEAFAQAL----------ASNTTLRTLRLDNNQI 1548

Query: 306  ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
             ++G +  A       ++  + +  N I   GI AL+ A   N  L  L+LN+N I+ +G
Sbjct: 1549 SDKGMEAFAQALASNTSIGVLSLNGNQISDKGIVALAQALASNTILSELSLNENQISDQG 1608

Query: 366  AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 425
                 QAL+   +L  L L +  +   G  + A+ L  NT L +++L  N+IS QG    
Sbjct: 1609 MEAFAQALASNTALRALRLDNNQISDKGMEAFAQALASNTILSELSLNGNQISDQGMEAF 1668

Query: 426  VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             +A+ +   L+ + +  NQ  ++G+E   + + S     AL L++++
Sbjct: 1669 AQALASNITLRALRLDNNQISDQGMEAFAQTLASNTTLRALRLDNNQ 1715



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 173/385 (44%), Gaps = 34/385 (8%)

Query: 89   YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            Y+ D      VNL+  +IS +G   L  ++ + T LK +++  NQ  ++G E + + + S
Sbjct: 1336 YMND-PKFASVNLSNQKISDRGAEVLAHSLASNTTLKSLDLDRNQISDKGAEAIAQALAS 1394

Query: 149  FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
                  L L  ++               +D  AE    +L+ N       A  +   N N
Sbjct: 1395 NAALETLWLNGNQI--------------SDKGAEAIAQSLASN------AALWKLSLNGN 1434

Query: 209  QSHNTSNQSH-MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGL 267
            Q  +   ++   +L +   L++L L+ N     G++  A  L S+   ++  L LN N +
Sbjct: 1435 QISDQGMEAFAQALASNTILMDLSLNGNQISDQGMKAFAQALASNT--SIRVLSLNENQI 1492

Query: 268  GITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVE 327
                 +  ++AL           S  ++ V     N++ ++G +  A       TL  + 
Sbjct: 1493 SDKEMEAFAQAL----------ASNTSIGVLSLNGNQISDKGMEAFAQALASNTTLRTLR 1542

Query: 328  MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
            +  N I   G+ A + A   N ++  L+LN N I+ KG + L QAL+    L+ L+L + 
Sbjct: 1543 LDNNQISDKGMEAFAQALASNTSIGVLSLNGNQISDKGIVALAQALASNTILSELSLNEN 1602

Query: 388  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
             +   G  + A+ L  NT L  + L  N+IS +G     +A+ + T L +++++ NQ  +
Sbjct: 1603 QISDQGMEAFAQALASNTALRALRLDNNQISDKGMEAFAQALASNTILSELSLNGNQISD 1662

Query: 448  EGVEEMEKLMKSFGMAAALVLEDDE 472
            +G+E   + + S     AL L++++
Sbjct: 1663 QGMEAFAQALASNITLRALRLDNNQ 1687


>gi|358387267|gb|EHK24862.1| hypothetical protein TRIVIDRAFT_30701 [Trichoderma virens Gv29-8]
          Length = 424

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 9/202 (4%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDCY 283
           L  ++L+DNAFG      L   L  S    L+ L LNNNGLG     L++ AL   H   
Sbjct: 97  LTTINLNDNAFGLNTQAPLVAFL--SAHVPLQHLYLNNNGLGPHAGILVADALSELHAKK 154

Query: 284 ESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL- 341
           E+++KEG  +  L+  I GRNRLEN      A  +     ++ ++M QNGI   GI+ L 
Sbjct: 155 EAARKEGKQVPDLETVICGRNRLENGSMAAWAKAYSLHNKIQEIKMVQNGIRQEGISCLL 214

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           SD       LR L+L DNT T KGA  L + +    +L  L +GD LL + GA  +A+ L
Sbjct: 215 SDGLHSASQLRILDLQDNTFTIKGARALAKVVPSWVALQELGVGDSLLSAKGALLLAESL 274

Query: 402 TD--NTTLEDVNLTCNEISVQG 421
           +   N  LE V L  NEI   G
Sbjct: 275 SQGKNKKLETVRLQYNEIKADG 296



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++M QNGI   GI+ L SD      +LR L+L DNT T KGA  L + +    +L  
Sbjct: 195 IQEIKMVQNGIRQEGISCLLSDGLHSASQLRILDLQDNTFTIKGARALAKVVPSWVALQE 254

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQG 110
           L +GD LL + GA  +A+ L+   N  LE V L  NEI   G
Sbjct: 255 LGVGDSLLSAKGALLLAESLSQGKNKKLETVRLQYNEIKADG 296


>gi|238505298|ref|XP_002383878.1| ran GTPase activating protein 1 (RNA1 protein) [Aspergillus flavus
           NRRL3357]
 gi|220689992|gb|EED46342.1| ran GTPase activating protein 1 (RNA1 protein) [Aspergillus flavus
           NRRL3357]
          Length = 417

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           ++LSDNAFG    + L D L  S    L  L LNNNG+G      ++ AL +     + +
Sbjct: 100 VNLSDNAFGKRTSKPLVDFL--STHVPLRHLILNNNGMGPDAGVEIAGALEELAKRKDEA 157

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITAL-SD 343
           +K G  +  L+  + GRNRLEN   K  A  ++     +  V+M QNGI   GI++L  +
Sbjct: 158 RKAGKEVPQLESIVCGRNRLENGSMKAWARAYEVHAAGMRSVKMTQNGIRQEGISSLLRE 217

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-- 401
                 NL  L+L DNT T  G+  L + L    SL  L +GDCLL + G   +A+ L  
Sbjct: 218 GLRHASNLEVLDLQDNTFTIMGSTALAEVLPGWTSLRELGVGDCLLSARGGVKVAQALAG 277

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLMK 458
             N  LE + L  N+I+ +G    + A K     L++I ++ N+F EE   V E+ ++++
Sbjct: 278 AKNEKLETLRLQYNDITAEGVKQFLHATKTALPSLRRIELNGNKFMEEDDNVTELREILE 337

Query: 459 S 459
           +
Sbjct: 338 A 338



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI++L  +       L  L+L DNT T  G+  L + L    SL  
Sbjct: 196 MRSVKMTQNGIRQEGISSLLREGLRHASNLEVLDLQDNTFTIMGSTALAEVLPGWTSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +A+ L    N  LE + L  N+I+ +G    + A K     L++I
Sbjct: 256 LGVGDCLLSARGGVKVAQALAGAKNEKLETLRLQYNDITAEGVKQFLHATKTALPSLRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N+F EE   V E+ +++++
Sbjct: 316 ELNGNKFMEEDDNVTELREILEA 338


>gi|169780534|ref|XP_001824731.1| Ran GTPase-activating protein 1 [Aspergillus oryzae RIB40]
 gi|83773471|dbj|BAE63598.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391872053|gb|EIT81196.1| Ran GTPase-activating protein [Aspergillus oryzae 3.042]
          Length = 417

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           ++LSDNAFG    + L D L  S    L  L LNNNG+G      ++ AL +     + +
Sbjct: 100 VNLSDNAFGKRTSKPLVDFL--STHVPLRHLILNNNGMGPDAGVEIAGALEELAKRKDEA 157

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITAL-SD 343
           +K G  +  L+  + GRNRLEN   K  A  ++     +  V+M QNGI   GI++L  +
Sbjct: 158 RKAGKEVPQLESIVCGRNRLENGSMKAWARAYEVHAAGMRSVKMTQNGIRQEGISSLLRE 217

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-- 401
                 NL  L+L DNT T  G+  L + L    SL  L +GDCLL + G   +A+ L  
Sbjct: 218 GLRHASNLEVLDLQDNTFTIMGSTALSEVLPGWTSLRELGVGDCLLSARGGVKVAQALAG 277

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLMK 458
             N  LE + L  N+I+ +G    + A K     L++I ++ N+F EE   V E+ ++++
Sbjct: 278 AKNEKLETLRLQYNDITAEGVKQFLHATKTALPSLRRIELNGNKFMEEDDNVTELREILE 337

Query: 459 S 459
           +
Sbjct: 338 A 338



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI++L  +       L  L+L DNT T  G+  L + L    SL  
Sbjct: 196 MRSVKMTQNGIRQEGISSLLREGLRHASNLEVLDLQDNTFTIMGSTALSEVLPGWTSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +A+ L    N  LE + L  N+I+ +G    + A K     L++I
Sbjct: 256 LGVGDCLLSARGGVKVAQALAGAKNEKLETLRLQYNDITAEGVKQFLHATKTALPSLRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N+F EE   V E+ +++++
Sbjct: 316 ELNGNKFMEEDDNVTELREILEA 338


>gi|327286098|ref|XP_003227768.1| PREDICTED: protein NLRC3-like [Anolis carolinensis]
          Length = 1002

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 191/440 (43%), Gaps = 59/440 (13%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  KGA  +  AL    SL  L
Sbjct: 605 IQKISLAENQIGNKGAKALARSLMVNRSLVALDLRSNSIGPKGAKAIADALKINQSLLSL 664

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL +  +K  GA S+A+ L +N TL  + L  N I  QG   + +A+K    LK++ +S 
Sbjct: 665 NLENNTMKEDGAKSLAEALVNNHTLMTLQLQKNSIGPQGSKKIAEALKKNWSLKELLLSS 724

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           N  G+ G   + + +K       L              D +S   +D+ A      L  N
Sbjct: 725 NCVGDVGAVALGEGLKINHSLLTL--------------DLQSNSISDAGATALTRALCSN 770

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
                                              L  L L +N+  P G   +   L++
Sbjct: 771 QG---------------------------------LTRLSLRENSISPEGAREIGIALQA 797

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           + C  L  L L  N L   G + ++ AL      + +  + L L+      N +++  AK
Sbjct: 798 NRC--LGNLDLAANLLHDEGVQAIALALK-----ANQTLASLHLQ-----WNFIQSNAAK 845

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            L+   +   +LE +++ +N I   GI AL+ A   N  L  L L    I  +GA+ LG+
Sbjct: 846 TLSQALQFNNSLEVLDLQENAIGDEGIVALALALRVNSTLTALYLQATLIGERGAVALGE 905

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
           ALS   SLA+L+L    +  AGA ++A  L  N TL  +NL  N + + G + +  A+  
Sbjct: 906 ALSVNKSLAVLDLRGNAIGLAGAKAMAGALKVNGTLRRLNLQENLLGMDGAICIATALTR 965

Query: 432 KTKLKQINVSENQFGEEGVE 451
              L  IN+  N+ GE G +
Sbjct: 966 SHSLTYINLQGNRIGESGAK 985



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     LV LDL  N+ GP G + +AD L+ +   +L  L L NN +   G K L++AL
Sbjct: 626 SLMVNRSLVALDLRSNSIGPKGAKAIADALKINQ--SLLSLNLENNTMKEDGAKSLAEAL 683

Query: 280 HDCY--------------ESSKKEGSPL----ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            + +              + SKK    L    +LK  +   N + + GA  L    K   
Sbjct: 684 VNNHTLMTLQLQKNSIGPQGSKKIAEALKKNWSLKELLLSSNCVGDVGAVALGEGLKINH 743

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           +L  +++  N I   G TAL+ A   N+ L  L+L +N+I+ +GA  +G AL     L  
Sbjct: 744 SLLTLDLQSNSISDAGATALTRALCSNQGLTRLSLRENSISPEGAREIGIALQANRCLGN 803

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL   G  +IA  L  N TL  ++L  N I       L +A++    L+ +++ 
Sbjct: 804 LDLAANLLHDEGVQAIALALKANQTLASLHLQWNFIQSNAAKTLSQALQFNNSLEVLDLQ 863

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G+EG+  +   ++      AL L+
Sbjct: 864 ENAIGDEGIVALALALRVNSTLTALYLQ 891



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 69/130 (53%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +LE +++ +N I   GI AL+ A   N  L  L L    I  +GA+ LG+ALS   SLA+
Sbjct: 856 SLEVLDLQENAIGDEGIVALALALRVNSTLTALYLQATLIGERGAVALGEALSVNKSLAV 915

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    +  AGA ++A  L  N TL  +NL  N + + G + +  A+     L  IN+ 
Sbjct: 916 LDLRGNAIGLAGAKAMAGALKVNGTLRRLNLQENLLGMDGAICIATALTRSHSLTYINLQ 975

Query: 131 ENQFGEEGVE 140
            N+ GE G +
Sbjct: 976 GNRIGESGAK 985



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 12/241 (4%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           ++ L++N  G  G + LA  L  +   +L  L L +N +G  G K ++ AL       K 
Sbjct: 607 KISLAENQIGNKGAKALARSLMVN--RSLVALDLRSNSIGPKGAKAIADAL-------KI 657

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             S L+L +     N ++ +GAK LA       TL  +++ +N I   G   +++A ++N
Sbjct: 658 NQSLLSLNL---ENNTMKEDGAKSLAEALVNNHTLMTLQLQKNSIGPQGSKKIAEALKKN 714

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
            +L+ L L+ N +   GA+ LG+ L    SL  L+L    +  AGA+++ + L  N  L 
Sbjct: 715 WSLKELLLSSNCVGDVGAVALGEGLKINHSLLTLDLQSNSISDAGATALTRALCSNQGLT 774

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
            ++L  N IS +G  ++  A++    L  ++++ N   +EGV+ +   +K+    A+L L
Sbjct: 775 RLSLRENSISPEGAREIGIALQANRCLGNLDLAANLLHDEGVQAIALALKANQTLASLHL 834

Query: 469 E 469
           +
Sbjct: 835 Q 835



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 159/394 (40%), Gaps = 87/394 (22%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++ +N I   G   +++A ++N  L+ L L+ N +   GA+ LG+ L    SL  
Sbjct: 688 TLMTLQLQKNSIGPQGSKKIAEALKKNWSLKELLLSSNCVGDVGAVALGEGLKINHSLLT 747

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    +  AGA+++ + L  N  L  ++L  N IS +G  ++  A++    L  ++++
Sbjct: 748 LDLQSNSISDAGATALTRALCSNQGLTRLSLRENSISPEGAREIGIALQANRCLGNLDLA 807

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N   +EGV+ +   +K+    A+L                                   
Sbjct: 808 ANLLHDEGVQAIALALKANQTLASL----------------------------------- 832

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
                 H   N   +N+ ++ + + Q + SL+       LDL +NA G  G+  LA  LR
Sbjct: 833 ------HLQWNFIQSNAAKTLSQALQFNNSLEV------LDLQENAIGDEGIVALALALR 880

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +    L  L L    +G  G   L +AL                               
Sbjct: 881 VNS--TLTALYLQATLIGERGAVALGEAL------------------------------- 907

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
               +V K L  L   ++  N I   G  A++ A + N  LR LNL +N +   GAI + 
Sbjct: 908 ----SVNKSLAVL---DLRGNAIGLAGAKAMAGALKVNGTLRRLNLQENLLGMDGAICIA 960

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            AL++  SL  +NL    +  +GA  I   +  N
Sbjct: 961 TALTRSHSLTYINLQGNRIGESGAKVITDAICTN 994



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 186/412 (45%), Gaps = 30/412 (7%)

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           NL  CL   A  S +++ L  N    ++ L  N+      +DL+ ++ +    ++++I++
Sbjct: 556 NLSSCLTYPAFQSLLSQLLYCN----NLRLDYNQFK-DNAMDLLGSILSGKDCQIQKISL 610

Query: 130 SENQFGEEGVEEMEK-LMKSFGMAAALVLEDDEGE-----CSDEEQDEES----EEENDS 179
           +ENQ G +G + + + LM +  + A  +  +  G       +D  +  +S      EN++
Sbjct: 611 AENQIGNKGAKALARSLMVNRSLVALDLRSNSIGPKGAKAIADALKINQSLLSLNLENNT 670

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
             E    +L+    N+    + Q   NS     +   +  +LK    L EL LS N  G 
Sbjct: 671 MKEDGAKSLAEALVNNHTLMTLQLQKNSIGPQGSKKIAE-ALKKNWSLKELLLSSNCVGD 729

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
           +G   L + L+ +   +L  L L +N +   G   L++AL      S +  + L+L+   
Sbjct: 730 VGAVALGEGLKIN--HSLLTLDLQSNSISDAGATALTRAL-----CSNQGLTRLSLR--- 779

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N +  EGA+ +    +  + L  +++  N ++  G+ A++ A + N+ L  L+L  N
Sbjct: 780 --ENSISPEGAREIGIALQANRCLGNLDLAANLLHDEGVQAIALALKANQTLASLHLQWN 837

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            I    A  L QAL    SL +L+L +  +   G  ++A  L  N+TL  + L    I  
Sbjct: 838 FIQSNAAKTLSQALQFNNSLEVLDLQENAIGDEGIVALALALRVNSTLTALYLQATLIGE 897

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
           +G + L +A+     L  +++  N  G  G + M   +K  G    L L+++
Sbjct: 898 RGAVALGEALSVNKSLAVLDLRGNAIGLAGAKAMAGALKVNGTLRRLNLQEN 949



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  +TL  + +  N I       LS A + N  L  L+L +N I  +G + L  A
Sbjct: 819 IALALKANQTLASLHLQWNFIQSNAAKTLSQALQFNNSLEVLDLQENAIGDEGIVALALA 878

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L   L+   GA ++ + L+ N +L  ++L  N I + G   +  A+K  
Sbjct: 879 LRVNSTLTALYLQATLIGERGAVALGEALSVNKSLAVLDLRGNAIGLAGAKAMAGALKVN 938

Query: 122 TKLKQINVSENQFGEEG 138
             L+++N+ EN  G +G
Sbjct: 939 GTLRRLNLQENLLGMDG 955



 Score = 42.0 bits (97), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 49/110 (44%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   +   TL  + +    I   G  AL +A   NK L  L+L  N I   GA  +  A
Sbjct: 875 LALALRVNSTLTALYLQATLIGERGAVALGEALSVNKSLAVLDLRGNAIGLAGAKAMAGA 934

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 111
           L    +L  LNL + LL   GA  IA  LT + +L  +NL  N I   G 
Sbjct: 935 LKVNGTLRRLNLQENLLGMDGAICIATALTRSHSLTYINLQGNRIGESGA 984



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K+L  +++  N I   G  A++ A + N  LR LNL +N +   GAI +  AL++  SL 
Sbjct: 911 KSLAVLDLRGNAIGLAGAKAMAGALKVNGTLRRLNLQENLLGMDGAICIATALTRSHSLT 970

Query: 70  ILNLGDCLLKSAGASSIAKYLTDN 93
            +NL    +  +GA  I   +  N
Sbjct: 971 YINLQGNRIGESGAKVITDAICTN 994


>gi|159127855|gb|EDP52970.1| ran GTPase activating protein 1 (RNA1 protein) [Aspergillus
           fumigatus A1163]
          Length = 422

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 125/242 (51%), Gaps = 15/242 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES---S 286
           ++LSDNAFG      L D L  S    L  L LNNNGLG     L++ AL    E    +
Sbjct: 100 VNLSDNAFGLNTQAPLVDFL--SRHVPLRHLILNNNGLGPAAGTLIADALTKLAERKEEA 157

Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITAL-S 342
           +K G   PL L+  + GRNRLEN   +  A  +K     +  V+M QNGI   GI+ L  
Sbjct: 158 RKAGEEIPL-LESIVCGRNRLENGSMEAWARAYKVHAAGIRSVKMTQNGIRQEGISLLLK 216

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +       L  L+L DNT T  G+  L   ++  PSL  L +GDCLL + G   +A+ L 
Sbjct: 217 EGLRHASALEVLDLQDNTFTIMGSTALAGVVAGWPSLRELGVGDCLLSARGGVKVAQALA 276

Query: 403 D--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLM 457
           +  N  ++ + L  NEI+ +G    + A K     L++I ++ N+F EE   V E+++++
Sbjct: 277 EGKNQNIQTLRLQYNEITAEGVKLFLHATKTALPSLRRIELNGNKFLEEDPNVTELQEVL 336

Query: 458 KS 459
           ++
Sbjct: 337 EA 338



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI+ L  +       L  L+L DNT T  G+  L   ++  PSL  
Sbjct: 196 IRSVKMTQNGIRQEGISLLLKEGLRHASALEVLDLQDNTFTIMGSTALAGVVAGWPSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +A+ L +  N  ++ + L  NEI+ +G    + A K     L++I
Sbjct: 256 LGVGDCLLSARGGVKVAQALAEGKNQNIQTLRLQYNEITAEGVKLFLHATKTALPSLRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N+F EE   V E+++++++
Sbjct: 316 ELNGNKFLEEDPNVTELQEVLEA 338


>gi|50312325|ref|XP_456196.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645332|emb|CAG98904.1| KLLA0F25036p [Kluyveromyces lactis]
          Length = 389

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 106/200 (53%), Gaps = 7/200 (3%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
            +L ++DLSDNAFG   ++ L   +R +    L+ L L NNG+G    + + KAL+   +
Sbjct: 95  PKLSKVDLSDNAFGLRTIDSLEKFIRETV--QLKHLILANNGMGPFAGERIGKALYQLAK 152

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVG-ITALS 342
           + +K G  L L+ F+ GRNRLEN   + L+   +     L  V + QNGI   G I  + 
Sbjct: 153 NKEKAGESL-LETFVCGRNRLENGSTRWLSQGLRAHGDDLHAVRLYQNGIRPQGCINLIK 211

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
                NKNL  L+L DNT T   +  L + L+    L  LNL DCLLK  G+ ++ K L 
Sbjct: 212 HGLSHNKNLHVLDLQDNTFTAVASETLAKYLTNWAQLKELNLNDCLLKGPGSHAVLKVLK 271

Query: 403 DNT--TLEDVNLTCNEISVQ 420
           +N    LE + L  NE++ Q
Sbjct: 272 ENKFDDLETLKLQYNELTQQ 291



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 12  LEHVEMPQNGIYHVG-ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L  V + QNGI   G I  +      NK L  L+L DNT T   +  L + L+    L  
Sbjct: 191 LHAVRLYQNGIRPQGCINLIKHGLSHNKNLHVLDLQDNTFTAVASETLAKYLTNWAQLKE 250

Query: 71  LNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQ 109
           LNL DCLLK  G+ ++ K L +N    LE + L  NE++ Q
Sbjct: 251 LNLNDCLLKGPGSHAVLKVLKENKFDDLETLKLQYNELTQQ 291


>gi|448521104|ref|XP_003868426.1| Rna1 GTPase-activating protein [Candida orthopsilosis Co 90-125]
 gi|380352766|emb|CCG25522.1| Rna1 GTPase-activating protein [Candida orthopsilosis]
          Length = 412

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 11/237 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ +   +  +   +LE L L+NNG+G      +  +L    ++    
Sbjct: 110 INLSDNAFGLQTIDPIEAYIAKAV--SLEHLILSNNGMGPFAGSRIGGSLFKLAKAQIAA 167

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEEN 348
               +LK FI GRNRLEN     LA   +  K LE V + QNGI   GI+ L +     N
Sbjct: 168 KKSSSLKTFICGRNRLENGSVNYLAVGLRNHKDLEVVRLYQNGIRPAGISKLVEKGLSHN 227

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--T 406
           K L+ L+L DNTIT  GAI L ++++  P L  LNL D LLK+ G+  + +    N    
Sbjct: 228 KKLKVLDLQDNTITTSGAIKLAESITNWPDLVELNLNDSLLKNKGSLEVVRAFGKNKKEN 287

Query: 407 LEDVNLTCNEI---SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           L  + L  NE+   S+    DL+       KL ++N   N+F EE  E +E + + F
Sbjct: 288 LTVLKLQYNELETDSLAVLADLIGEYLPNLKLLELN--GNRF-EEDSEHIESIKEVF 341



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 80/154 (51%), Gaps = 9/154 (5%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA   +  K LE V + QNGI   GI+ L +     NKKL+ L+L DNTIT  GAI L +
Sbjct: 191 LAVGLRNHKDLEVVRLYQNGIRPAGISKLVEKGLSHNKKLKVLDLQDNTITTSGAIKLAE 250

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEI---SVQGGLDLV 115
           +++  P L  LNL D LLK+ G+  + +    N    L  + L  NE+   S+    DL+
Sbjct: 251 SITNWPDLVELNLNDSLLKNKGSLEVVRAFGKNKKENLTVLKLQYNELETDSLAVLADLI 310

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
                  KL ++N   N+F EE  E +E + + F
Sbjct: 311 GEYLPNLKLLELN--GNRF-EEDSEHIESIKEVF 341


>gi|296805880|ref|XP_002843764.1| ran GTPase activating protein 1 [Arthroderma otae CBS 113480]
 gi|238845066|gb|EEQ34728.1| ran GTPase activating protein 1 [Arthroderma otae CBS 113480]
          Length = 420

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 128/245 (52%), Gaps = 23/245 (9%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+  + L  +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL
Sbjct: 91  ALREVSTLQTIDLSDNAFGLNTQAPLVEFLKAHT--PLRHLILNNNGLGPKAGNLIADAL 148

Query: 280 HDCYESSKKEGSPLA--------LKVFIAGRNRLEN----EGAKMLAAVFKKLKTLERVE 327
            + +  ++KE +  A        L+  + GRNRLE+      AKM+ +  K L+T   + 
Sbjct: 149 KELH--TRKEEARSANPKVEVPYLETIVCGRNRLESGSMASWAKMVKSHGKGLRT---IR 203

Query: 328 MPQNGIYHVGITALSD-AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
           M QNGI   GI  L D   +    L  L+L DNT T  G+  L + ++  P +  ++L D
Sbjct: 204 MTQNGIRQDGIVLLLDTGLQHAPELEVLDLQDNTFTMAGSRVLARVVTGWPKVREISLSD 263

Query: 387 CLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSEN 443
           C LK  GA  +AK L   +N  LE + L  N+I+ +G  + V+A K+    LK++ ++ N
Sbjct: 264 CYLKGKGALLVAKTLAKGENKQLEILRLAYNDITAEGLKEFVQAAKSSLPALKRVELNGN 323

Query: 444 QFGEE 448
           +  EE
Sbjct: 324 KLSEE 328



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGI   GI  L D   +   +L  L+L DNT T  G+  L + ++  P +
Sbjct: 197 KGLRTIRMTQNGIRQDGIVLLLDTGLQHAPELEVLDLQDNTFTMAGSRVLARVVTGWPKV 256

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             ++L DC LK  GA  +AK L   +N  LE + L  N+I+ +G  + V+A K+    LK
Sbjct: 257 REISLSDCYLKGKGALLVAKTLAKGENKQLEILRLAYNDITAEGLKEFVQAAKSSLPALK 316

Query: 126 QINVSENQFGEE 137
           ++ ++ N+  EE
Sbjct: 317 RVELNGNKLSEE 328


>gi|326426976|gb|EGD72546.1| hypothetical protein PTSG_11612 [Salpingoeca sp. ATCC 50818]
          Length = 1979

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 178/391 (45%), Gaps = 34/391 (8%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
            G  AL+ A   N  L  LNL++NT+  +GA  +  A++   SL  L+L +  +   GA 
Sbjct: 79  TGAGALAVALSVNTNLERLNLDNNTLGPQGAARVADAIATHTSLQWLSLFNNDIGDEGAG 138

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           S A  L  N +L  + L CN I   GG  L  AM+  +KL QI +  N    + + E   
Sbjct: 139 SFAAALQQNNSLYVIRLNCNNIGPDGGRALGTAMEKNSKLTQITLWGNSI--DAIREFGA 196

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSH 204
            +    M     L +DE +  D+ ++E+     + D  G  + L           S Q+ 
Sbjct: 197 ALPPERMMQCNDLSNDERDALDDAREEKRTHHLNWDNLG--AMLKQQSLKPKTRRSIQAI 254

Query: 205 NNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
             +N +    N + +  + GAR++ L L D+                     L+EL+L+ 
Sbjct: 255 AKNNCAAADLNYTPLHTQ-GARVLALALRDSG-------------------RLQELELDG 294

Query: 265 NGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             LG TG  +L+ AL       K   S L L +  A    +++EGA  +A   +K  TLE
Sbjct: 295 TRLGPTGAAILAAAL-------KHHTSLLRLSLQSAN---VQDEGAMAIAGALRKNNTLE 344

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
           R+ +  N I   G  AL++A + N +L+ + ++ N I  KGAI   +AL    +L+ L L
Sbjct: 345 RILLGSNYISRPGANALANAMKTNTSLKVMFVDRNRIGDKGAIAFARALQDNSTLSHLLL 404

Query: 385 GDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
            +  + + G  ++   L  N TL+ ++L  N
Sbjct: 405 YENRITANGGRTLGLALHTNKTLQQLSLQGN 435



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 56/108 (51%)

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
            G  AL+ A   N NL  LNL++NT+  +GA  +  A++   SL  L+L +  +   GA 
Sbjct: 79  TGAGALAVALSVNTNLERLNLDNNTLGPQGAARVADAIATHTSLQWLSLFNNDIGDEGAG 138

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           S A  L  N +L  + L CN I   GG  L  AM+  +KL QI +  N
Sbjct: 139 SFAAALQQNNSLYVIRLNCNNIGPDGGRALGTAMEKNSKLTQITLWGN 186



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 55/113 (48%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G   L+ A  ++  L+ L L+   +   GA  L  AL    SL  L+L    ++  GA +
Sbjct: 273 GARVLALALRDSGRLQELELDGTRLGPTGAAILAAALKHHTSLLRLSLQSANVQDEGAMA 332

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           IA  L  N TLE + L  N IS  G   L  AMK  T LK + V  N+ G++G
Sbjct: 333 IAGALRKNNTLERILLGSNYISRPGANALANAMKTNTSLKVMFVDRNRIGDKG 385



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 73/145 (50%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L  +GA++LA   +    L+ +E+    +   G   L+ A + + +L  L+L    +  +
Sbjct: 269 LHTQGARVLALALRDSGRLQELELDGTRLGPTGAAILAAALKHHTSLLRLSLQSANVQDE 328

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           GA+ +  AL K  +L  + LG   +   GA+++A  +  NT+L+ + +  N I  +G + 
Sbjct: 329 GAMAIAGALRKNNTLERILLGSNYISRPGANALANAMKTNTSLKVMFVDRNRIGDKGAIA 388

Query: 425 LVKAMKNKTKLKQINVSENQFGEEG 449
             +A+++ + L  + + EN+    G
Sbjct: 389 FARALQDNSTLSHLLLYENRITANG 413



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 44/379 (11%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LAA  K   +L  + +    +   G  A++ A  +N  L  + L  N I+  GA  L  
Sbjct: 304 ILAAALKHHTSLLRLSLQSANVQDEGAMAIAGALRKNNTLERILLGSNYISRPGANALAN 363

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A+    SL ++ +    +   GA + A+ L DN+TL  + L  N I+  GG  L  A+  
Sbjct: 364 AMKTNTSLKVMFVDRNRIGDKGAIAFARALQDNSTLSHLLLYENRITANGGRTLGLALHT 423

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGEC-----SDEEQDEESEE 175
              L+Q+++  N     G E      ++      +V+E    E      +  +   E  E
Sbjct: 424 NKTLQQLSLQGN-----GKETAAAFGRALPPNRQVVIEFAAEELNAYKNARAQTMTEGPE 478

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
           +  +D E     LS +D N +  +  +S      S NT N +      G RL E      
Sbjct: 479 QQIADLE---KALSESDLNEATMSKLRS-----ISANTCNAA--VFFDGVRLGE------ 522

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
              P        L  ++C   L+   L+N  LG TG   L+ A+ +             L
Sbjct: 523 ---PEAKALAQALKANTCIVNLD---LDNTHLGDTGVIALADAIANHPR----------L 566

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           +     +N + ++GA   A   +   +L    +  N +   G  AL++A   NK+  H+ 
Sbjct: 567 RWVSLYKNNIGDDGAVAFARAIQTSTSLCSARINCNHVGAAGGRALAEAMNANKSFTHIT 626

Query: 356 LNDNTITYKGAIPLGQALS 374
           +  N++    A   G ALS
Sbjct: 627 MWGNSVEAVRA--FGTALS 643



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%)

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
           A ++L    L   GA ++A  L+ NT LE +NL  N +  QG   +  A+   T L+ ++
Sbjct: 67  ARISLEGASLGPTGAGALAVALSVNTNLERLNLDNNTLGPQGAARVADAIATHTSLQWLS 126

Query: 129 VSENQFGEEG 138
           +  N  G+EG
Sbjct: 127 LFNNDIGDEG 136



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%)

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
           A ++L    L   GA ++A  L+ NT LE +NL  N +  QG   +  A+   T L+ ++
Sbjct: 67  ARISLEGASLGPTGAGALAVALSVNTNLERLNLDNNTLGPQGAARVADAIATHTSLQWLS 126

Query: 440 VSENQFGEEG 449
           +  N  G+EG
Sbjct: 127 LFNNDIGDEG 136


>gi|315046458|ref|XP_003172604.1| hypothetical protein MGYG_05196 [Arthroderma gypseum CBS 118893]
 gi|311342990|gb|EFR02193.1| hypothetical protein MGYG_05196 [Arthroderma gypseum CBS 118893]
          Length = 373

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 116/235 (49%), Gaps = 17/235 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + +   
Sbjct: 98  LQTIDLSDNAFGLNTQAPLVEFLKAHT--PLRHLILNNNGLGPKAGNLIADALRELH--V 153

Query: 287 KKEGSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVG 337
           KKE +  A        L+  + GRNRLE+      A + K   K L  + M QNGI   G
Sbjct: 154 KKEAARAANPKVEVPYLETIVCGRNRLESGSMAAWAKMVKDHGKGLRSIRMTQNGIRQDG 213

Query: 338 ITAL-SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           I  L  D  +    L  L+L DNT T  G+  L + +   P++  ++L DCLLK  GA  
Sbjct: 214 IVLLLGDGLQHAPELEVLDLQDNTFTITGSRVLARVVPGWPNIREISLSDCLLKGKGALC 273

Query: 397 IAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
            A  L   +N  +E + L  NEI+  G  + V+A K     LK++ ++ NQ  EE
Sbjct: 274 FATALAKGENKKVEILRLAYNEITAAGLKEFVQAAKTSLPALKRVELNGNQLNEE 328



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 4/132 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGI   GI  L  D  +   +L  L+L DNT T  G+  L + +   P++
Sbjct: 197 KGLRSIRMTQNGIRQDGIVLLLGDGLQHAPELEVLDLQDNTFTITGSRVLARVVPGWPNI 256

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             ++L DCLLK  GA   A  L   +N  +E + L  NEI+  G  + V+A K     LK
Sbjct: 257 REISLSDCLLKGKGALCFATALAKGENKKVEILRLAYNEITAAGLKEFVQAAKTSLPALK 316

Query: 126 QINVSENQFGEE 137
           ++ ++ NQ  EE
Sbjct: 317 RVELNGNQLNEE 328


>gi|71000297|ref|XP_754843.1| ran GTPase activating protein 1 (RNA1 protein) [Aspergillus
           fumigatus Af293]
 gi|66852480|gb|EAL92805.1| ran GTPase activating protein 1 (RNA1 protein) [Aspergillus
           fumigatus Af293]
          Length = 422

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 124/242 (51%), Gaps = 15/242 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES---S 286
           ++LSDNAFG      L D L  S    L  L LNNNGLG     L++ AL    E    +
Sbjct: 100 VNLSDNAFGLNTQAPLVDFL--SRHVPLRHLILNNNGLGPAAGTLIADALTKLAERKEEA 157

Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITAL-S 342
           +K G   PL L   + GRNRLEN   +  A  +K     +  V+M QNGI   GI+ L  
Sbjct: 158 RKAGEEIPL-LDSIVCGRNRLENGSMEAWARAYKVHAAGIRSVKMTQNGIRQEGISLLLK 216

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +       L  L+L DNT T  G+  L   ++  PSL  L +GDCLL + G   +A+ L 
Sbjct: 217 EGLRHASALEVLDLQDNTFTIMGSTALAGVVAGWPSLRELGVGDCLLSARGGVKVAQALA 276

Query: 403 D--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLM 457
           +  N  ++ + L  NEI+ +G    + A K     L++I ++ N+F EE   V E+++++
Sbjct: 277 EGKNQNIQTLRLQYNEITAEGVKLFLHATKTALPSLRRIELNGNKFLEEDPNVTELQEVL 336

Query: 458 KS 459
           ++
Sbjct: 337 EA 338



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI+ L  +       L  L+L DNT T  G+  L   ++  PSL  
Sbjct: 196 IRSVKMTQNGIRQEGISLLLKEGLRHASALEVLDLQDNTFTIMGSTALAGVVAGWPSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +A+ L +  N  ++ + L  NEI+ +G    + A K     L++I
Sbjct: 256 LGVGDCLLSARGGVKVAQALAEGKNQNIQTLRLQYNEITAEGVKLFLHATKTALPSLRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N+F EE   V E+++++++
Sbjct: 316 ELNGNKFLEEDPNVTELQEVLEA 338


>gi|326476990|gb|EGE01000.1| ran GTPase activating protein 1 [Trichophyton equinum CBS 127.97]
          Length = 430

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 17/232 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + +  +KKE
Sbjct: 101 IDLSDNAFGLNTQAPLVEFLKAHT--PLRHLILNNNGLGPKAGNLIADALRELH--TKKE 156

Query: 290 GSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITA 340
            +  A        L+  + GRNRLE+      A + K   K L  + M QNGI   GI  
Sbjct: 157 EARAANPKVPVPYLETIVCGRNRLESGSMAAWAKMVKDHGKGLRSIRMTQNGIRQDGIVL 216

Query: 341 LSDA-FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L D   +    L  L+L DNT T  G+  L + ++  P++  ++L DC LK  GA  +AK
Sbjct: 217 LLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNIREISLSDCYLKGKGALRVAK 276

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
            L   +N  +E + L  N+I+ +G  + V+A K     LK++ ++ N+  EE
Sbjct: 277 SLAKGENKKIEILRLAYNDITAEGLKEFVEAAKTSLPALKRVELNGNKLNEE 328



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDA-FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGI   GI  L D   +   +L  L+L DNT T  G+  L + ++  P++
Sbjct: 197 KGLRSIRMTQNGIRQDGIVLLLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNI 256

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             ++L DC LK  GA  +AK L   +N  +E + L  N+I+ +G  + V+A K     LK
Sbjct: 257 REISLSDCYLKGKGALRVAKSLAKGENKKIEILRLAYNDITAEGLKEFVEAAKTSLPALK 316

Query: 126 QINVSENQFGEE 137
           ++ ++ N+  EE
Sbjct: 317 RVELNGNKLNEE 328



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 28/235 (11%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           + E++L  N  G+  C+ L+  L     + KK  +     +F +   RL +E  + L+ +
Sbjct: 36  ITEIRLGGNTFGVPACERLASVLR----TQKKLHTANLADIFTS---RLLDEIPQALSFL 88

Query: 317 FKKL---KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
            + L   KTLE +++  N         L +  + +  LRHL LN+N +  K    +  AL
Sbjct: 89  LQALRDVKTLETIDLSDNAFGLNTQAPLVEFLKAHTPLRHLILNNNGLGPKAGNLIADAL 148

Query: 374 SKL----------------PSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNE 416
            +L                P L  +  G   L+S   ++ AK + D+   L  + +T N 
Sbjct: 149 RELHTKKEEARAANPKVPVPYLETIVCGRNRLESGSMAAWAKMVKDHGKGLRSIRMTQNG 208

Query: 417 ISVQGGLDLVK-AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           I   G + L+   +++  +L+ +++ +N F   G   + +++  +     + L D
Sbjct: 209 IRQDGIVLLLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNIREISLSD 263


>gi|345802365|ref|XP_547153.3| PREDICTED: protein NLRC3 [Canis lupus familiaris]
          Length = 1068

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 192/448 (42%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 671  IQRISLAENQISNKGAKALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFL 730

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N +   G   + + +K    LK++  S 
Sbjct: 731  SLQSNEIRDNGARSMAEALATNRTLSVLHLQKNTVGPVGAQLMAETLKQNRSLKELIFSS 790

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G E + K            L  ++G    E  D +S   +D+        L  N
Sbjct: 791  NSIGDGGAEALAK-----------ALRVNQGL---ENLDLQSNSISDTGVAALMGALCAN 836

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L  L+L +N+  P G   LA  LRS
Sbjct: 837  QA---------------------------------LTSLNLRENSISPEGARELARALRS 863

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +            AL       N ++   AK
Sbjct: 864  NS--TLKNLDLTANLLHDQGAQAIAVAMRENQ----------ALTSLHLQWNFIQAGAAK 911

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G +A++ A + N  L  L L   +I  +GA  LG 
Sbjct: 912  ALGQALQLNRSLTSLDLQENAIGDEGASAVASALKTNATLTALYLQAASIGARGAQALGD 971

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 972  ALAVNGTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSG 1031

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
               L+ IN+  N  GE G   + + +K+
Sbjct: 1032 NHGLQHINLQGNHIGESGARMISEAIKT 1059



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 122/276 (44%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA----------------------- 256
           SL     L  LDL  N+ GP G + LAD L+ +   A                       
Sbjct: 692 SLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFLSLQSNEIRDNGARSMAEALAT 751

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              L  L L  N +G  G +L+++ L       K+  S   LK  I   N + + GA+ L
Sbjct: 752 NRTLSVLHLQKNTVGPVGAQLMAETL-------KQNRS---LKELIFSSNSIGDGGAEAL 801

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   +  + LE +++  N I   G+ AL  A   N+ L  LNL +N+I+ +GA  L +AL
Sbjct: 802 AKALRVNQGLENLDLQSNSISDTGVAALMGALCANQALTSLNLRENSISPEGARELARAL 861

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L  L+L   LL   GA +IA  + +N  L  ++L  N I       L +A++   
Sbjct: 862 RSNSTLKNLDLTANLLHDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNR 921

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K+     AL L+
Sbjct: 922 SLTSLDLQENAIGDEGASAVASALKTNATLTALYLQ 957



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 162/382 (42%), Gaps = 34/382 (8%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G  ++++A   N+ L  L+L  NT+   GA  + + 
Sbjct: 717  LADALKINRTLAFLSLQSNEIRDNGARSMAEALATNRTLSVLHLQKNTVGPVGAQLMAET 776

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L +  SL  L      +   GA ++AK L  N  LE+++L  N IS  G   L+ A+   
Sbjct: 777  LKQNRSLKELIFSSNSIGDGGAEALAKALRVNQGLENLDLQSNSISDTGVAALMGALCAN 836

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L  +N+ EN    EG  E+ + ++S                + +  D  +   +D  A
Sbjct: 837  QALTSLNLRENSISPEGARELARALRS--------------NSTLKNLDLTANLLHDQGA 882

Query: 182  EGDNSNLSHNDSNHS-HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
            +     +  N +  S H   N     + ++   + Q + SL +      LDL +NA G  
Sbjct: 883  QAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTS------LDLQENAIGDE 936

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            G   +A  L+++    L  L L    +G  G + L  AL          G+   L++   
Sbjct: 937  GASAVASALKTNA--TLTALYLQAASIGARGAQALGDAL-------AVNGT---LEILDL 984

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
              N +   GAK LA   K   +L R+ + +N +   G   ++ A   N  L+H+NL  N 
Sbjct: 985  RGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHINLQGNH 1044

Query: 361  ITYKGAIPLGQAL-SKLPSLAI 381
            I   GA  + +A+ +  PS  +
Sbjct: 1045 IGESGARMISEAIKTNAPSCTV 1066


>gi|400601290|gb|EJP68933.1| ran GTPase activating protein 1 [Beauveria bassiana ARSEF 2860]
          Length = 418

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 9/226 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDCYESS 286
           ++++DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H   E++
Sbjct: 100 INVNDNAFGLNTQAPLVAFL--AAHLPLQHLYLNNNGLGPHAGILIADALSELHAKKEAA 157

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDA 344
           +KEG  +  L+  I GRNRLEN      A  +     ++ ++M QNGI   GI+ L  + 
Sbjct: 158 RKEGKTVPDLETVICGRNRLENGSMTAWAKAYSLHNKIKVIKMVQNGIRQEGISHLIGEG 217

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD- 403
                 L+ L+L DNT T +G+  L     +  SL  L +GDCLL   G+  +A  L   
Sbjct: 218 LRHTAGLQVLDLQDNTFTLRGSKTLAAVAPRWASLRELAVGDCLLGGKGSVLVAGALAQG 277

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
            N  LE + L  N+++  G      A KN   LK+I ++ N+F EE
Sbjct: 278 KNGKLETLRLQFNDMTPAGVKGFADAAKNLPALKRIELNGNKFEEE 323



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 3/126 (2%)

Query: 15  VEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           ++M QNGI   GI+ L  +       L+ L+L DNT T +G+  L     +  SL  L +
Sbjct: 198 IKMVQNGIRQEGISHLIGEGLRHTAGLQVLDLQDNTFTLRGSKTLAAVAPRWASLRELAV 257

Query: 74  GDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           GDCLL   G+  +A  L    N  LE + L  N+++  G      A KN   LK+I ++ 
Sbjct: 258 GDCLLGGKGSVLVAGALAQGKNGKLETLRLQFNDMTPAGVKGFADAAKNLPALKRIELNG 317

Query: 132 NQFGEE 137
           N+F EE
Sbjct: 318 NKFEEE 323


>gi|302658779|ref|XP_003021089.1| hypothetical protein TRV_04802 [Trichophyton verrucosum HKI 0517]
 gi|291184968|gb|EFE40471.1| hypothetical protein TRV_04802 [Trichophyton verrucosum HKI 0517]
          Length = 427

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 17/232 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + +  +KKE
Sbjct: 101 IDLSDNAFGLNTQAPLVEFLKAHT--PLRHLILNNNGLGPKAGNLIADALRELH--AKKE 156

Query: 290 GSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITA 340
            +  A        L+  + GRNRLE+      A + K   K L  + M QNGI   GI  
Sbjct: 157 EARAANPKVPVPYLETIVCGRNRLESGSMAAWAKMVKDHGKGLRSIRMTQNGIRQDGIVL 216

Query: 341 LSDA-FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L D   +    L  L+L DNT T  G+  L + ++  P++  ++L DC LK  GA  +AK
Sbjct: 217 LLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNIREISLSDCYLKGKGALRVAK 276

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEE 448
            L   +N  +E + L  N+I+ +G  + V+A K     LK++ ++ N+  EE
Sbjct: 277 SLAKGENKKIEILRLAYNDITAEGLKEFVEAAKTSLPVLKRVELNGNKLNEE 328



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDA-FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGI   GI  L D   +   +L  L+L DNT T  G+  L + ++  P++
Sbjct: 197 KGLRSIRMTQNGIRQDGIVLLLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNI 256

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
             ++L DC LK  GA  +AK L   +N  +E + L  N+I+ +G  + V+A K     LK
Sbjct: 257 REISLSDCYLKGKGALRVAKSLAKGENKKIEILRLAYNDITAEGLKEFVEAAKTSLPVLK 316

Query: 126 QINVSENQFGEE 137
           ++ ++ N+  EE
Sbjct: 317 RVELNGNKLNEE 328


>gi|302507037|ref|XP_003015475.1| hypothetical protein ARB_06601 [Arthroderma benhamiae CBS 112371]
 gi|291179047|gb|EFE34835.1| hypothetical protein ARB_06601 [Arthroderma benhamiae CBS 112371]
          Length = 426

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 17/232 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + +  +KKE
Sbjct: 101 IDLSDNAFGLNTQAPLVEFLKAHT--PLRHLILNNNGLGPKAGNLIADALRELH--AKKE 156

Query: 290 GSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITA 340
            +  A        L+  + GRNRLE+      A + K   K L  + M QNGI   GI  
Sbjct: 157 EARAANPKVPVPYLETIVCGRNRLESGSMAAWAKMVKDHGKGLRSIRMTQNGIRQDGIVL 216

Query: 341 LSDA-FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L D   +    L  L+L DNT T  G+  L + ++  P++  ++L DC LK  GA  +AK
Sbjct: 217 LLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNIREISLSDCYLKGKGALRVAK 276

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEE 448
            L   +N  +E + L  N+I+ +G  + V+A K     LK++ ++ N+  EE
Sbjct: 277 SLAKGENKKIEILRLAYNDITAEGLKEFVEAAKTSLPVLKRVELNGNKLNEE 328



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDA-FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGI   GI  L D   +   +L  L+L DNT T  G+  L + ++  P++
Sbjct: 197 KGLRSIRMTQNGIRQDGIVLLLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNI 256

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
             ++L DC LK  GA  +AK L   +N  +E + L  N+I+ +G  + V+A K     LK
Sbjct: 257 REISLSDCYLKGKGALRVAKSLAKGENKKIEILRLAYNDITAEGLKEFVEAAKTSLPVLK 316

Query: 126 QINVSENQFGEE 137
           ++ ++ N+  EE
Sbjct: 317 RVELNGNKLNEE 328


>gi|326472149|gb|EGD96158.1| ran GTPase activating protein 1 [Trichophyton tonsurans CBS 112818]
          Length = 430

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 17/232 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + +  +KKE
Sbjct: 101 IDLSDNAFGLNTQAPLVEFLKAHT--PLRHLILNNNGLGPKAGNLIADALRELH--TKKE 156

Query: 290 GSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITA 340
            +  A        L+  + GRNRLE+      A + K   K L  + M QNGI   GI  
Sbjct: 157 EARAANPKVPVPYLETIVCGRNRLESGSMAAWAKMVKDHGKGLRSIRMTQNGIRQDGIVL 216

Query: 341 LSDA-FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L D   +    L  L+L DNT T  G+  L + ++  P++  ++L DC LK  GA  +AK
Sbjct: 217 LLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNIREISLSDCYLKGKGALRVAK 276

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
            L   +N  +E + L  N+I+ +G  + V+A K     LK++ ++ N+  EE
Sbjct: 277 SLAKGENKKIEILRLAYNDITAEGLKEFVEAAKTSLPALKRVELNGNKLNEE 328



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 4/132 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDA-FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGI   GI  L D   +   +L  L+L DNT T  G+  L + ++  P++
Sbjct: 197 KGLRSIRMTQNGIRQDGIVLLLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNI 256

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             ++L DC LK  GA  +AK L   +N  +E + L  N+I+ +G  + V+A K     LK
Sbjct: 257 REISLSDCYLKGKGALRVAKSLAKGENKKIEILRLAYNDITAEGLKEFVEAAKTSLPALK 316

Query: 126 QINVSENQFGEE 137
           ++ ++ N+  EE
Sbjct: 317 RVELNGNKLNEE 328



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 28/235 (11%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           + E++L  N  G+  C+ L   L     + KK  +     +F +   RL +E  + L+ +
Sbjct: 36  ITEIRLGGNTFGVPACERLVSVLR----TQKKLHTANLADIFTS---RLLDEIPQALSFL 88

Query: 317 FKKLK---TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
            + L+   TLE +++  N         L +  + +  LRHL LN+N +  K    +  AL
Sbjct: 89  LQALRDVETLETIDLSDNAFGLNTQAPLVEFLKAHTPLRHLILNNNGLGPKAGNLIADAL 148

Query: 374 SKL----------------PSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNE 416
            +L                P L  +  G   L+S   ++ AK + D+   L  + +T N 
Sbjct: 149 RELHTKKEEARAANPKVPVPYLETIVCGRNRLESGSMAAWAKMVKDHGKGLRSIRMTQNG 208

Query: 417 ISVQGGLDLVK-AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           I   G + L+   +++  +L+ +++ +N F   G   + +++  +     + L D
Sbjct: 209 IRQDGIVLLLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNIREISLSD 263


>gi|449297595|gb|EMC93613.1| hypothetical protein BAUCODRAFT_246917 [Baudoinia compniacensis
           UAMH 10762]
          Length = 425

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 123/246 (50%), Gaps = 16/246 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  ++L+DNAFG   VE L   L       L+ L LNNNGLG     L++ AL    E 
Sbjct: 95  KLHTVNLNDNAFGLNTVEPLRPFLSQHT--PLQHLYLNNNGLGPAAGTLVADALAQLAEK 152

Query: 286 ------SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 ++ E +   L+  + GRNRLEN         +     ++ V+M QNGI   GI 
Sbjct: 153 KAQARKTQGESAVPDLETVVCGRNRLENGSMAAWVKAYTANDKVKTVKMVQNGIRQEGIA 212

Query: 340 AL-SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
           AL      + K L+ L+L DNT T + A  L   L   P L  L +GDCLL + G   + 
Sbjct: 213 ALLQKGLSKCKELKVLDLQDNTFTSRAAKTLATVLPSWPFLRDLGVGDCLLSARGGVLLG 272

Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK---TKLKQINVSENQFGEE--GVE 451
           + L+   N  LE + L  NEI V+G   +  A  ++    +L+++ ++ N+F EE   V+
Sbjct: 273 EALSQFHNKQLEVLRLQFNEIDVKGLKAITDAATSQNALPRLRRVELNGNKFSEEDPNVK 332

Query: 452 EMEKLM 457
           +++ L+
Sbjct: 333 KLQTLL 338



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 18/173 (10%)

Query: 8   KLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+KT   V+M QNGI   GI AL      + K+L+ L+L DNT T + A  L   L   P
Sbjct: 195 KVKT---VKMVQNGIRQEGIAALLQKGLSKCKELKVLDLQDNTFTSRAAKTLATVLPSWP 251

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK--- 121
            L  L +GDCLL + G   + + L+   N  LE + L  NEI V+G   +  A  ++   
Sbjct: 252 FLRDLGVGDCLLSARGGVLLGEALSQFHNKQLEVLRLQFNEIDVKGLKAITDAATSQNAL 311

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
            +L+++ ++ N+F EE   V++++ L+           E D  E  D ++D+E
Sbjct: 312 PRLRRVELNGNKFSEEDPNVKKLQTLLSERK-------EKDGSEYPDVDEDDE 357


>gi|378733382|gb|EHY59841.1| hypothetical protein HMPREF1120_07821 [Exophiala dermatitidis
           NIH/UT8656]
          Length = 418

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 129/239 (53%), Gaps = 13/239 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE---SS 286
           +DLSDNAFG    E L D L  S    L+ L LNNNG+G      +++AL    E   S+
Sbjct: 99  IDLSDNAFGLNTKEPLVDFL--SKHTPLKHLILNNNGMGPIAGTSIAEALVTLAERKDSA 156

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITAL-SD 343
           +KEG  +  L+  + GRNRLEN      A  ++  KT ++ V+M QNGI   GI+ L S 
Sbjct: 157 RKEGKDVPYLESIVCGRNRLENGSMAAWAKAYEAHKTGIKSVKMTQNGIRPEGISHLISS 216

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT- 402
                 NL  L++ DNT T KGA  L +A+     L  L +GD LL   GA+ + + LT 
Sbjct: 217 GLSICSNLEVLDMQDNTFTLKGAQALAKAIKGWSGLKELGVGDDLLGGRGATKVFEALTS 276

Query: 403 -DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLM 457
            +N  +E + L  N+I   G   L++A ++   KL+++ ++ N+F E+   VE +  L+
Sbjct: 277 GNNKAIEILRLQYNDIHPAGLKALLQAAQDGLPKLRRVELNGNKFEEDDPSVEALASLL 335



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 7/152 (4%)

Query: 2   LAAVFKKLKT-LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLG 59
            A  ++  KT ++ V+M QNGI   GI+ L S        L  L++ DNT T KGA  L 
Sbjct: 184 WAKAYEAHKTGIKSVKMTQNGIRPEGISHLISSGLSICSNLEVLDMQDNTFTLKGAQALA 243

Query: 60  QALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKA 117
           +A+     L  L +GD LL   GA+ + + LT  +N  +E + L  N+I   G   L++A
Sbjct: 244 KAIKGWSGLKELGVGDDLLGGRGATKVFEALTSGNNKAIEILRLQYNDIHPAGLKALLQA 303

Query: 118 MKNK-TKLKQINVSENQFGEE--GVEEMEKLM 146
            ++   KL+++ ++ N+F E+   VE +  L+
Sbjct: 304 AQDGLPKLRRVELNGNKFEEDDPSVEALASLL 335


>gi|225560170|gb|EEH08452.1| ran GTPase activating protein [Ajellomyces capsulatus G186AR]
          Length = 487

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 121/244 (49%), Gaps = 18/244 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG    + L + LR+     L  L LNNNGLG      ++ AL +  ES  K 
Sbjct: 152 IDLSDNAFGVNTKDPLVEFLRAH--LPLRHLILNNNGLGPEAGTFIANALTELSESKLKA 209

Query: 290 GS--------PLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITA 340
            S        P AL+  + GRNRLE    +  A   K   K L  + M QNGIY  G+  
Sbjct: 210 RSNPEIKYEIP-ALETIVCGRNRLEAGSMEAWARAIKANGKGLRTIRMKQNGIYSKGVVK 268

Query: 341 L-SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L +        L   +L DNT   +G++ L   LS LPSL  L + DC L + G   +AK
Sbjct: 269 LLNTGICHAPELEVFDLEDNTYGKEGSVALAAVLSGLPSLRELGVDDCALTAKGWLRVAK 328

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGVEEME 454
            L+   NT LE + L  NEI+ +G   LV   K     LK++ ++ N F E  E +  ++
Sbjct: 329 ALSAGGNTKLEILKLKGNEINGKGVGALVHVAKTSLPALKKVFLNANAFDEDNENIMRLQ 388

Query: 455 KLMK 458
           +L+K
Sbjct: 389 ELLK 392



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGIY  G+  L +       +L   +L DNT   +G++ L   LS LPSL
Sbjct: 249 KGLRTIRMKQNGIYSKGVVKLLNTGICHAPELEVFDLEDNTYGKEGSVALAAVLSGLPSL 308

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L + DC L + G   +AK L+   NT LE + L  NEI+ +G   LV   K     LK
Sbjct: 309 RELGVDDCALTAKGWLRVAKALSAGGNTKLEILKLKGNEINGKGVGALVHVAKTSLPALK 368

Query: 126 QINVSENQFGE--EGVEEMEKLMK 147
           ++ ++ N F E  E +  +++L+K
Sbjct: 369 KVFLNANAFDEDNENIMRLQELLK 392


>gi|410896007|ref|XP_003961491.1| PREDICTED: protein NLRC3-like [Takifugu rubripes]
          Length = 1067

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 197/447 (44%), Gaps = 59/447 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  ALS A   N+ L  LNL +N I  KGA  L +AL    +L  L
Sbjct: 670  IQKMSLAENAISNKGAKALSRALLVNRTLTSLNLRNNNIGSKGARFLAEALKMNQALVSL 729

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            NL    +  AGA ++A+ L  N  L  +N+  N +   G   +  A+K    L ++ +  
Sbjct: 730  NLQSNGIDEAGAEALAEVLQCNRKLVTLNMQKNIVGAGGAKRIADALKTNKTLTELMICS 789

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            NQ G++G            +A AL +                                  
Sbjct: 790  NQLGDKGTA---------ALAEALTV---------------------------------- 806

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
              NH+  +     N+ +    T+    +SL  G  LV L+L +N+ G  G   +A  L+ 
Sbjct: 807  --NHTLLSLQLQSNSISNRGMTALTKALSLNRG--LVSLNLRENSIGVEGARNMAKALQK 862

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +   +L++L L  + L   G + ++ A+ +       +G    L+      N +++   K
Sbjct: 863  NS--SLQDLDLTADLLHDDGVQAIAAAIKN------NQG----LRSLHLQWNFIKSSATK 910

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             LA       T+E +++ +N + + G+T L+DA + N +LR L L   ++   GAI L +
Sbjct: 911  ALAHSLHFNTTMELLDLQENAVGNEGVTFLADALKANTSLRTLCLQGVSVGTGGAIALAE 970

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL    +L  L+L    +   GA ++A  L  N +L+ +NL  N + + G + +  A K 
Sbjct: 971  ALMSNQTLQTLDLRGNSVGMEGAKALANALKTNRSLKSLNLQENSLGMDGAIFIATAFKE 1030

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMK 458
              +L  IN+  N  GE G + +   ++
Sbjct: 1031 NHQLTYINLQGNGIGESGAKVISDTIR 1057



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 160/366 (43%), Gaps = 31/366 (8%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
             LA   K  + L  + +  NGI   G  AL++  + N+KL  LN+  N +   GA  +  
Sbjct: 715  FLAEALKMNQALVSLNLQSNGIDEAGAEALAEVLQCNRKLVTLNMQKNIVGAGGAKRIAD 774

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            AL    +L  L +    L   G +++A+ LT N TL  + L  N IS +G   L KA+  
Sbjct: 775  ALKTNKTLTELMICSNQLGDKGTAALAEALTVNHTLLSLQLQSNSISNRGMTALTKALSL 834

Query: 121  KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
               L  +N+ EN  G EG   M K ++                 S ++ D  ++  +D  
Sbjct: 835  NRGLVSLNLRENSIGVEGARNMAKALQK--------------NSSLQDLDLTADLLHDDG 880

Query: 181  AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
             +   + + +N    S +       N  +S  T   +H SL     +  LDL +NA G  
Sbjct: 881  VQAIAAAIKNNQGLRSLHL----QWNFIKSSATKALAH-SLHFNTTMELLDLQENAVGNE 935

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            GV  LAD L+++   +L  L L    +G  G   L++AL           S   L+    
Sbjct: 936  GVTFLADALKANT--SLRTLCLQGVSVGTGGAIALAEALM----------SNQTLQTLDL 983

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
              N +  EGAK LA   K  ++L+ + + +N +   G   ++ AF+EN  L ++NL  N 
Sbjct: 984  RGNSVGMEGAKALANALKTNRSLKSLNLQENSLGMDGAIFIATAFKENHQLTYINLQGNG 1043

Query: 361  ITYKGA 366
            I   GA
Sbjct: 1044 IGESGA 1049



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 12/240 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    LV L+L  N     G E LA++L+  C   L  L +  N +G  G K ++ AL
Sbjct: 719 ALKMNQALVSLNLQSNGIDEAGAEALAEVLQ--CNRKLVTLNMQKNIVGAGGAKRIADAL 776

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
               +++K       L   +   N+L ++G   LA       TL  +++  N I + G+T
Sbjct: 777 ----KTNK------TLTELMICSNQLGDKGTAALAEALTVNHTLLSLQLQSNSISNRGMT 826

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL+ A   N+ L  LNL +N+I  +GA  + +AL K  SL  L+L   LL   G  +IA 
Sbjct: 827 ALTKALSLNRGLVSLNLRENSIGVEGARNMAKALQKNSSLQDLDLTADLLHDDGVQAIAA 886

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            + +N  L  ++L  N I       L  ++   T ++ +++ EN  G EGV  +   +K+
Sbjct: 887 AIKNNQGLRSLHLQWNFIKSSATKALAHSLHFNTTMELLDLQENAVGNEGVTFLADALKA 946



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 11/229 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L L  N F    +E L  LL +  C  ++++ L  N +   G K LS+AL        + 
Sbjct: 644 LRLESNNFKDDVMELLGSLLSAKDC-QIQKMSLAENAISNKGAKALSRAL-----LVNRT 697

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            + L L+      N + ++GA+ LA   K  + L  + +  NGI   G  AL++  + N+
Sbjct: 698 LTSLNLR-----NNNIGSKGARFLAEALKMNQALVSLNLQSNGIDEAGAEALAEVLQCNR 752

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L  LN+  N +   GA  +  AL    +L  L +    L   G +++A+ LT N TL  
Sbjct: 753 KLVTLNMQKNIVGAGGAKRIADALKTNKTLTELMICSNQLGDKGTAALAEALTVNHTLLS 812

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L  N IS +G   L KA+     L  +N+ EN  G EG   M K ++
Sbjct: 813 LQLQSNSISNRGMTALTKALSLNRGLVSLNLRENSIGVEGARNMAKALQ 861



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 72/137 (52%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            T+E +++ +N + + G+T L+DA + N  LR L L   ++   GAI L +AL    +L  
Sbjct: 921  TMELLDLQENAVGNEGVTFLADALKANTSLRTLCLQGVSVGTGGAIALAEALMSNQTLQT 980

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    +   GA ++A  L  N +L+ +NL  N + + G + +  A K   +L  IN+ 
Sbjct: 981  LDLRGNSVGMEGAKALANALKTNRSLKSLNLQENSLGMDGAIFIATAFKENHQLTYINLQ 1040

Query: 131  ENQFGEEGVEEMEKLMK 147
             N  GE G + +   ++
Sbjct: 1041 GNGIGESGAKVISDTIR 1057



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%)

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           ++ ++L +N I+ KGA  L +AL    +L  LNL +  + S GA  +A+ L  N  L  +
Sbjct: 670 IQKMSLAENAISNKGAKALSRALLVNRTLTSLNLRNNNIGSKGARFLAEALKMNQALVSL 729

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           NL  N I   G   L + ++   KL  +N+ +N  G  G + +   +K+
Sbjct: 730 NLQSNGIDEAGAEALAEVLQCNRKLVTLNMQKNIVGAGGAKRIADALKT 778



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 46/85 (54%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL+ +++  N +   G  AL++A + N+ L+ LNL +N++   GAI +  A  +   L 
Sbjct: 976  QTLQTLDLRGNSVGMEGAKALANALKTNRSLKSLNLQENSLGMDGAIFIATAFKENHQLT 1035

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNT 94
             +NL    +  +GA  I+  +  NT
Sbjct: 1036 YINLQGNGIGESGAKVISDTIRGNT 1060


>gi|327305343|ref|XP_003237363.1| ran GTPase activating protein 1 [Trichophyton rubrum CBS 118892]
 gi|326460361|gb|EGD85814.1| ran GTPase activating protein 1 [Trichophyton rubrum CBS 118892]
          Length = 426

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 17/232 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG      L + L++     L  L LNNNGLG     L++ AL + +  +KKE
Sbjct: 101 IDLSDNAFGLNTQAPLVEFLKAHT--PLRHLILNNNGLGPKAGNLIADALRELH--TKKE 156

Query: 290 GSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITA 340
            +  A        L+  + GRNRLE+      A + K   K L  + M QNGI   GI  
Sbjct: 157 EARAANPKVPVPYLETIVCGRNRLESGSMAAWAKMVKDHGKGLRSIRMTQNGIRQDGIVL 216

Query: 341 LSDA-FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L D   +    L  L+L DNT T  G+  L + ++  P++  ++L DC LK  GA  +AK
Sbjct: 217 LLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNIREISLSDCYLKGKGALRVAK 276

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEE 448
            L   +N  +E + L  N+I+ +G  + V+A K     LK++ ++ N+  EE
Sbjct: 277 SLAKGENKKIEILRLAYNDINAEGLKEFVEAAKTSLPVLKRVELNGNKLSEE 328



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 17/170 (10%)

Query: 10  KTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGI   GI  L D   +   +L  L+L DNT T  G+  L + ++  P++
Sbjct: 197 KGLRSIRMTQNGIRQDGIVLLLDGGLQHAPELEVLDLQDNTFTMTGSRVLARVVTGWPNI 256

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
             ++L DC LK  GA  +AK L   +N  +E + L  N+I+ +G  + V+A K     LK
Sbjct: 257 REISLSDCYLKGKGALRVAKSLAKGENKKIEILRLAYNDINAEGLKEFVEAAKTSLPVLK 316

Query: 126 QINVSENQFGEE--GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           ++ ++ N+  EE   +E++  L           LED + +   E++DE +
Sbjct: 317 RVELNGNKLSEEDSNLEDLRNL-----------LEDRKEKLGKEDEDESA 355


>gi|402072751|gb|EJT68455.1| ran GTPase-activating protein 1 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 420

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 15/258 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDCY 283
           L  ++L+DNAFG      +A  L S     L+ L LNNNGLG      ++ AL   H   
Sbjct: 98  LRTINLNDNAFGINTYAPVAAFLSSHV--PLQHLYLNNNGLGPEAGMKIAGALSELHAKK 155

Query: 284 ESSKKEGSPLA--LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
           E+++K G      L+  I GRNRLEN   +  A  F     L  ++M QNGI   GI  L
Sbjct: 156 EAARKAGQADVPNLETVICGRNRLENGSMRAWAKTFSLHNRLREIKMVQNGIRQEGIVHL 215

Query: 342 -SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            +D      ++R L+L DNT T  GA  L +       +  L + D LL + GA ++AK 
Sbjct: 216 ITDGLSHLSDIRVLDLQDNTFTLTGATALAKVAPNWTEVVELGINDSLLSNKGAKALAKA 275

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQF--GEEGVEEMEK 455
           L+   N  LE + L  NEI+ +G   L  A+K+    L+++ ++ N+   G++ +  M  
Sbjct: 276 LSKGKNAKLEVLRLQFNEINSKGVQALADAVKDALPVLRKLEINGNRLSEGDDVIAAMTS 335

Query: 456 LM--KSFGMAAALVLEDD 471
           L+  +   +A  +V+EDD
Sbjct: 336 LLEKRKEELAGDVVMEDD 353



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 8/169 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F     L  ++M QNGI   GI  L +D       +R L+L DNT T  GA  L +
Sbjct: 187 WAKTFSLHNRLREIKMVQNGIRQEGIVHLITDGLSHLSDIRVLDLQDNTFTLTGATALAK 246

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM 118
                  +  L + D LL + GA ++AK L+   N  LE + L  NEI+ +G   L  A+
Sbjct: 247 VAPNWTEVVELGINDSLLSNKGAKALAKALSKGKNAKLEVLRLQFNEINSKGVQALADAV 306

Query: 119 KNKTK-LKQINVSENQF--GEEGVEEMEKLM--KSFGMAAALVLEDDEG 162
           K+    L+++ ++ N+   G++ +  M  L+  +   +A  +V+EDD G
Sbjct: 307 KDALPVLRKLEINGNRLSEGDDVIAAMTSLLEKRKEELAGDVVMEDDWG 355


>gi|340522435|gb|EGR52668.1| predicted protein [Trichoderma reesei QM6a]
          Length = 424

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 135/262 (51%), Gaps = 22/262 (8%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L S     L+ L LNNNGLG     L++ AL   H  
Sbjct: 96  KLTTINLNDNAFGLNTQAPLVAFLSSHV--PLQHLYLNNNGLGPHAGILVADALSELHAK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA- 340
            E+++KEG  +  L+  I GRNRLEN      A  +   K ++ ++M QNGI   GI+  
Sbjct: 154 KEAARKEGKEVPDLETVICGRNRLENGSMAAWARAYSLHKNIKEIKMVQNGIRQEGISRL 213

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS+       LR L+L DNT T  GA  L + +     L  L +GD LL + G+  +A  
Sbjct: 214 LSEGLNHASQLRILDLQDNTFTIMGARALAKVVPTWAELQELGVGDSLLSAKGSLLLAAA 273

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-----LKQINVSENQFGE--EGVE 451
           L    N  LE + L  N+I  +G    V+A+ N  K     LK+I ++ N+F E  + + 
Sbjct: 274 LALEKNKKLETLRLQYNDIKSEG----VRALANAAKVALPALKRIELNGNKFTEDDDAIL 329

Query: 452 EMEKLM--KSFGMAAALVLEDD 471
           ++++L+  +    A  +++ED+
Sbjct: 330 KLQELLEERKEQFAGDIIIEDE 351



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 16/165 (9%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K ++ ++M QNGI   GI+ L S+      +LR L+L DNT T  GA  L + +     L
Sbjct: 193 KNIKEIKMVQNGIRQEGISRLLSEGLNHASQLRILDLQDNTFTIMGARALAKVVPTWAEL 252

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK--- 123
             L +GD LL + G+  +A  L    N  LE + L  N+I  +G    V+A+ N  K   
Sbjct: 253 QELGVGDSLLSAKGSLLLAAALALEKNKKLETLRLQYNDIKSEG----VRALANAAKVAL 308

Query: 124 --LKQINVSENQFGE--EGVEEMEKLM--KSFGMAAALVLEDDEG 162
             LK+I ++ N+F E  + + ++++L+  +    A  +++ED+ G
Sbjct: 309 PALKRIELNGNKFTEDDDAILKLQELLEERKEQFAGDIIIEDEWG 353


>gi|406607416|emb|CCH41207.1| Ran GTPase-activating protein 1 [Wickerhamomyces ciferrii]
          Length = 411

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 10/236 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   +E L   L  S    L  L L+NNG+G    + + K+L+    S   +
Sbjct: 110 VNLSDNAFGLTTIEQLEKFL--SEAIYLNHLILSNNGMGPFAGERIGKSLYKLSLSKSTQ 167

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDAFEEN 348
           G   +LK FI GRNRLEN     L+   K  K L+ V++ QNGI   GI  L S   + N
Sbjct: 168 GQS-SLKTFICGRNRLENGSINYLSIGLKNHKDLQVVKLYQNGIRPSGIKKLISQGLKFN 226

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL--TDNTT 406
             L  L+L DNTIT K    L   L + P L  LN+ DCLL   G+  + K L  T    
Sbjct: 227 TQLTILDLQDNTITKKSGSVLADNLPQWPELKELNVNDCLLNPKGSLDLIKSLEKTKFNK 286

Query: 407 LEDVNLTCNEISVQGGLDLVKAM--KNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           LE + L  NE+     L ++ ++  +N   L ++ ++ N+F EE  E +EK+   F
Sbjct: 287 LESLKLQYNELD-NDSLKILSSIISENLPVLTKLELNGNRF-EEDSELIEKIQSIF 340



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 7/153 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           L+   K  K L+ V++ QNGI   GI  L S   + N +L  L+L DNTIT K    L  
Sbjct: 190 LSIGLKNHKDLQVVKLYQNGIRPSGIKKLISQGLKFNTQLTILDLQDNTITKKSGSVLAD 249

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVKAM 118
            L + P L  LN+ DCLL   G+  + K L  T    LE + L  NE+     L ++ ++
Sbjct: 250 NLPQWPELKELNVNDCLLNPKGSLDLIKSLEKTKFNKLESLKLQYNELD-NDSLKILSSI 308

Query: 119 --KNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
             +N   L ++ ++ N+F EE  E +EK+   F
Sbjct: 309 ISENLPVLTKLELNGNRF-EEDSELIEKIQSIF 340


>gi|361126898|gb|EHK98884.1| putative Ran GTPase-activating protein 1 [Glarea lozoyensis 74030]
          Length = 417

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 132/258 (51%), Gaps = 14/258 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L S     L+ L LNNNGLG     L++ AL   H  
Sbjct: 96  KLHTINLNDNAFGLNTQAPLVAFLSSHV--PLQHLILNNNGLGPHAGILIADALSELHAK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            + ++K G  +  L+  I GRNRLEN      A  +     ++ V+M QNGI   GI+  
Sbjct: 154 KQEARKAGEDVPDLETVICGRNRLENGSMNAWAKAYSLHTGVKEVKMVQNGIRQEGISHL 213

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+D  +  K ++ L+L DNT T  GA  L   +S    +  L +GD LL S G    A  
Sbjct: 214 LTDGLKHTKGIKTLDLQDNTFTILGAKALASVVSGWTDVEELGIGDSLLGSKGGVLFANA 273

Query: 401 LTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGVEEMEK 455
           L    N  L+ + L  N+I+ +G  +  K  K     LK+I ++ N+F E  + + E+++
Sbjct: 274 LGKGHNKKLQTLRLQFNDITAKGLQEFSKVAKESLPALKKIELNGNKFSENDQAIMELKE 333

Query: 456 LMKSF--GMAAALVLEDD 471
           L+++    +A  +V+EDD
Sbjct: 334 LLEARKEKLAGDIVIEDD 351



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 8/159 (5%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ V+M QNGI   GI+  L+D  +  K ++ L+L DNT T  GA  L   +S    +  
Sbjct: 195 VKEVKMVQNGIRQEGISHLLTDGLKHTKGIKTLDLQDNTFTILGAKALASVVSGWTDVEE 254

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GD LL S G    A  L    N  L+ + L  N+I+ +G  +  K  K     LK+I
Sbjct: 255 LGIGDSLLGSKGGVLFANALGKGHNKKLQTLRLQFNDITAKGLQEFSKVAKESLPALKKI 314

Query: 128 NVSENQFGE--EGVEEMEKLMKSF--GMAAALVLEDDEG 162
            ++ N+F E  + + E+++L+++    +A  +V+EDD G
Sbjct: 315 ELNGNKFSENDQAIMELKELLEARKEKLAGDIVIEDDWG 353


>gi|308198053|ref|XP_001386801.2| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|149388832|gb|EAZ62778.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 414

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 12/229 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  ++LSDNAFG   ++ + D L  +   ++E L L+NNG+G      +  +L     + 
Sbjct: 107 LTYINLSDNAFGLQTIDPIEDYLAKAV--SIEHLILSNNGMGPFAGARIGGSLFKLARAK 164

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AF 345
           K  G P +LK F+ GRNRLEN     LA   +    L+ V + QNGI   GI+ L + + 
Sbjct: 165 KAAGKP-SLKTFVCGRNRLENGSINYLAVGLRNHADLKIVSLYQNGIRPAGISKLVEKSL 223

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
              KNL  ++L DNTIT  GA  + ++L+   +L  LNL D LLK+ G + IA+      
Sbjct: 224 ALIKNLEVVDLEDNTITPTGAAKIAESLANWENLVELNLNDSLLKNEGFTKIAEAFKTGA 283

Query: 406 TLEDVN---LTCNEI---SVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           + +D+    L  NE+   S++  +D+V   K    LK++ ++ N F EE
Sbjct: 284 SKKDLTFLKLVYNELKADSLKALVDIVD--KKLPNLKKLELNGNIFDEE 330



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 12  LEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ V + QNGI   GI+ L + +    K L  ++L DNTIT  GA  + ++L+   +L  
Sbjct: 200 LKIVSLYQNGIRPAGISKLVEKSLALIKNLEVVDLEDNTITPTGAAKIAESLANWENLVE 259

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVN---LTCNEI---SVQGGLDLVKAMKNKTKL 124
           LNL D LLK+ G + IA+      + +D+    L  NE+   S++  +D+V   K    L
Sbjct: 260 LNLNDSLLKNEGFTKIAEAFKTGASKKDLTFLKLVYNELKADSLKALVDIVD--KKLPNL 317

Query: 125 KQINVSENQFGEE 137
           K++ ++ N F EE
Sbjct: 318 KKLELNGNIFDEE 330


>gi|121705048|ref|XP_001270787.1| ran GTPase activating protein 1 (RNA1 protein) [Aspergillus
           clavatus NRRL 1]
 gi|119398933|gb|EAW09361.1| ran GTPase activating protein 1 (RNA1 protein) [Aspergillus
           clavatus NRRL 1]
          Length = 420

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 127/247 (51%), Gaps = 25/247 (10%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES---S 286
           ++LSDNAFG      L D L  S    L  L LNNNGLG     L++ AL    E    +
Sbjct: 100 VNLSDNAFGLNTQAPLVDFL--SRHVPLRHLILNNNGLGPAAGTLIADALTKLAERKEEA 157

Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSD 343
           +K G   PL L+  + GRNRLEN   +  A  +K     +  V+M QNGI   GI+ L  
Sbjct: 158 RKAGKEVPL-LESIVCGRNRLENGSMEAWARAYKVHAAGIRSVKMTQNGIRQEGISLLL- 215

Query: 344 AFEENKNLRH------LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
                + LRH      L+L DNT T  G+  L   ++  PSL  L +GDCLL + G   +
Sbjct: 216 ----KEGLRHAGVLEVLDLQDNTFTVMGSTALAGVVAGWPSLRELGVGDCLLSARGGVKV 271

Query: 398 AKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEE 452
           A+ L +  N  ++ + L  N+I+ +G    + A K     L++I ++ N+F E+   V E
Sbjct: 272 AQALAEGKNEKIQTLRLQYNDITAEGVKQFLHATKTALPSLRRIELNGNKFLEDDPNVTE 331

Query: 453 MEKLMKS 459
           +++++++
Sbjct: 332 LQEILEA 338



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI+ L  +       L  L+L DNT T  G+  L   ++  PSL  
Sbjct: 196 IRSVKMTQNGIRQEGISLLLKEGLRHAGVLEVLDLQDNTFTVMGSTALAGVVAGWPSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +A+ L +  N  ++ + L  N+I+ +G    + A K     L++I
Sbjct: 256 LGVGDCLLSARGGVKVAQALAEGKNEKIQTLRLQYNDITAEGVKQFLHATKTALPSLRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N+F E+   V E+++++++
Sbjct: 316 ELNGNKFLEDDPNVTELQEILEA 338


>gi|46446975|ref|YP_008340.1| hypothetical protein pc1341 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400616|emb|CAF24065.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1764

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 202/445 (45%), Gaps = 38/445 (8%)

Query: 21   GIYHVGIT-----ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 75
            G   VGI       +++A   N  LR L L +N I+ +GA    +AL+   +L  L L +
Sbjct: 1336 GFSRVGINDKEAEIIANALALNTALRSLRLQNNQISDRGAEAFARALASNATLKALWLDN 1395

Query: 76   CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
              + + GA +IA+ L  NT L ++ L  N+IS +G   + +A+ + T L+ + +  NQ  
Sbjct: 1396 NQISNEGAEAIAQALASNTALRELYLGNNQISDKGTEAIAQALASNTTLETLWLDNNQIS 1455

Query: 136  EEGVEEMEKLMKSFGMAAAL-VLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSN 194
             +GV   + L++S      L V+  +  + SDE        E  + A   N+ L   D  
Sbjct: 1456 FKGV---KALVQSLAFNTTLKVIHLNSNKISDE------GAEAIAQALASNTTLKILDL- 1505

Query: 195  HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
                       N+  S     +   +L     L  L L +N     G E +A  L S+  
Sbjct: 1506 ----------GNNQISDKGGKEIGKALAFNTVLRRLYLRNNQISDEGAEAIAQALASNT- 1554

Query: 255  FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA 314
              LE L L+NN +   G K L ++L           S   L+      N++ N+G + LA
Sbjct: 1555 -TLETLWLDNNQISFKGVKALVQSL----------ASNTVLENLSLNGNQISNKGMEALA 1603

Query: 315  AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
                  + L  + +  N I   G+ A + A   N  L+ L+L  N I+ KGA  L QAL+
Sbjct: 1604 QALASNRKLREISLNGNQISDEGMEAFARALTSNTALKVLHLGSNQISDKGAGALAQALA 1663

Query: 375  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 434
               +L  L LGD  +   GA +IA+    NT LE ++L  N+IS +G   + +A  + TK
Sbjct: 1664 SNTALRELYLGDNQINDKGAETIAQAFASNTKLETLSLKGNQISDEGAKAIAQAFASNTK 1723

Query: 435  LKQINVSENQFGEEGVEEMEKLMKS 459
            L+ +++  N   +EG + + +   S
Sbjct: 1724 LETLSLRGNLISDEGAKAIAQAFAS 1748



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 202/434 (46%), Gaps = 31/434 (7%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            L  + +  N I   G  A + A   N  L+ L L++N I+ +GA  + QAL+   +L  L
Sbjct: 1360 LRSLRLQNNQISDRGAEAFARALASNATLKALWLDNNQISNEGAEAIAQALASNTALREL 1419

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
             LG+  +   G  +IA+ L  NTTLE + L  N+IS +G   LV+++   T LK I+++ 
Sbjct: 1420 YLGNNQISDKGTEAIAQALASNTTLETLWLDNNQISFKGVKALVQSLAFNTTLKVIHLNS 1479

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N+  +EG E + + + S       +L+    + SD+   E  +      A   N+ L   
Sbjct: 1480 NKISDEGAEAIAQALAS--NTTLKILDLGNNQISDKGGKEIGK------ALAFNTVL--- 1528

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
                 +  +NQ  +   ++   +  S+ +L+T      L L +N     GV+ L   L S
Sbjct: 1529 --RRLYLRNNQISDEGAEAIAQALASNTTLET------LWLDNNQISFKGVKALVQSLAS 1580

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    LE L LN N +   G + L++AL     S++K      L+      N++ +EG +
Sbjct: 1581 NTV--LENLSLNGNQISNKGMEALAQAL----ASNRK------LREISLNGNQISDEGME 1628

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
              A        L+ + +  N I   G  AL+ A   N  LR L L DN I  KGA  + Q
Sbjct: 1629 AFARALTSNTALKVLHLGSNQISDKGAGALAQALASNTALRELYLGDNQINDKGAETIAQ 1688

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            A +    L  L+L    +   GA +IA+    NT LE ++L  N IS +G   + +A  +
Sbjct: 1689 AFASNTKLETLSLKGNQISDEGAKAIAQAFASNTKLETLSLRGNLISDEGAKAIAQAFAS 1748

Query: 432  KTKLKQINVSENQF 445
             T LK I  + N++
Sbjct: 1749 NTNLKTIYFNNNRY 1762



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 18/256 (7%)

Query: 225  ARLVELDLSDNA-----FGPIGV-EGLADLLRSSCCF--ALEELKLNNNGLGITGCKLLS 276
            +RL +L ++D+      F  +G+ +  A+++ ++     AL  L+L NN +   G +  +
Sbjct: 1320 SRLFQLYMNDSGTIALGFSRVGINDKEAEIIANALALNTALRSLRLQNNQISDRGAEAFA 1379

Query: 277  KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
            +AL           S   LK      N++ NEGA+ +A        L  + +  N I   
Sbjct: 1380 RAL----------ASNATLKALWLDNNQISNEGAEAIAQALASNTALRELYLGNNQISDK 1429

Query: 337  GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
            G  A++ A   N  L  L L++N I++KG   L Q+L+   +L +++L    +   GA +
Sbjct: 1430 GTEAIAQALASNTTLETLWLDNNQISFKGVKALVQSLAFNTTLKVIHLNSNKISDEGAEA 1489

Query: 397  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
            IA+ L  NTTL+ ++L  N+IS +GG ++ KA+   T L+++ +  NQ  +EG E + + 
Sbjct: 1490 IAQALASNTTLKILDLGNNQISDKGGKEIGKALAFNTVLRRLYLRNNQISDEGAEAIAQA 1549

Query: 457  MKSFGMAAALVLEDDE 472
            + S      L L++++
Sbjct: 1550 LASNTTLETLWLDNNQ 1565



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 148/353 (41%), Gaps = 67/353 (18%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            TL+ + +  N I   G  A++ A   N  L+ L+L +N I+ KG   +G+AL+    L  
Sbjct: 1471 TLKVIHLNSNKISDEGAEAIAQALASNTTLKILDLGNNQISDKGGKEIGKALAFNTVLRR 1530

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L L +  +   GA +IA+ L  NTTLE + L  N+IS +G   LV+++ + T L+ ++++
Sbjct: 1531 LYLRNNQISDEGAEAIAQALASNTTLETLWLDNNQISFKGVKALVQSLASNTVLENLSLN 1590

Query: 131  ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
             NQ   +G+E          +A AL         S+ +  E S   N    EG  +    
Sbjct: 1591 GNQISNKGME---------ALAQAL--------ASNRKLREISLNGNQISDEGMEAFARA 1633

Query: 191  NDSNHS----HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLA 246
              SN +    H  SNQ  +    +   +  S+ +L+      EL L DN     G E +A
Sbjct: 1634 LTSNTALKVLHLGSNQISDKGAGALAQALASNTALR------ELYLGDNQINDKGAETIA 1687

Query: 247  DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
                S+    LE L L  N                                      ++ 
Sbjct: 1688 QAFASNT--KLETLSLKGN--------------------------------------QIS 1707

Query: 307  NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
            +EGAK +A  F     LE + +  N I   G  A++ AF  N NL+ +  N+N
Sbjct: 1708 DEGAKAIAQAFASNTKLETLSLRGNLISDEGAKAIAQAFASNTNLKTIYFNNN 1760


>gi|145234039|ref|XP_001400392.1| Ran GTPase-activating protein 1 [Aspergillus niger CBS 513.88]
 gi|134057332|emb|CAK44531.1| unnamed protein product [Aspergillus niger]
 gi|350635104|gb|EHA23466.1| hypothetical protein ASPNIDRAFT_174620 [Aspergillus niger ATCC
           1015]
          Length = 417

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 15/242 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           ++LSDNAFG    + L D L       L  L LNNNG+G      ++KAL +     E +
Sbjct: 100 VNLSDNAFGANTQKPLVDFLARHT--PLRHLILNNNGMGPEAGSNIAKALTELAQRKEEA 157

Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITAL-S 342
           +KEG   PL L+  + GRNRLEN      A  ++     +  V+M QNGI   GI+ L  
Sbjct: 158 RKEGKEVPL-LESIVCGRNRLENGSMAAWARAYEVHAVGMRSVKMTQNGIRQEGISMLLK 216

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           D       L  L+L DNT T  G+  L   +S  PSL  L + DCLL   G   +A+ L 
Sbjct: 217 DGLRHCSALEVLDLQDNTFTIMGSTALAGVVSSWPSLRELGVSDCLLSGRGGVKVAQALA 276

Query: 403 D--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLM 457
           +  N  ++ + L  NEI+ +G    + A K     L++I ++ N F E+   V E+ +++
Sbjct: 277 EAKNQKVQTLRLQYNEITAEGVKQFLHATKTALPALRRIELNGNIFNEDDNNVTELREIL 336

Query: 458 KS 459
           ++
Sbjct: 337 EA 338



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI+ L  D       L  L+L DNT T  G+  L   +S  PSL  
Sbjct: 196 MRSVKMTQNGIRQEGISMLLKDGLRHCSALEVLDLQDNTFTIMGSTALAGVVSSWPSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L + DCLL   G   +A+ L +  N  ++ + L  NEI+ +G    + A K     L++I
Sbjct: 256 LGVSDCLLSGRGGVKVAQALAEAKNQKVQTLRLQYNEITAEGVKQFLHATKTALPALRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N F E+   V E+ +++++
Sbjct: 316 ELNGNIFNEDDNNVTELREILEA 338


>gi|431906605|gb|ELK10726.1| Protein NLRC3 [Pteropus alecto]
          Length = 1104

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 196/449 (43%), Gaps = 61/449 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 707  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 766

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  G+ SIA+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 767  SLQSNRIRDDGSRSIAEALAANRTLSVLHLQKNTIGPTGAQRMADALKQNRSLKELMFSS 826

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G +           A A  L+ ++G    +  D +S   +D+        L  N
Sbjct: 827  NSIGDGGAK-----------ALAEALKVNQGL---QSLDLQSNSISDTGVAALMGALCAN 872

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L+L +N+  P G + LA   R+
Sbjct: 873  RT---------------------------------LLSLNLRENSISPEGAQHLA---RA 896

Query: 252  SCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
             C    L+ L L  N L   G + ++ A+ + +          AL       N ++   A
Sbjct: 897  LCTNSTLKNLDLTANLLHDQGAQAIAVAVRENH----------ALTSLHLQWNFIQAGAA 946

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            K L    +  ++L  +++ +N I   G+ A+++A + N  L  L L   +I   GA  LG
Sbjct: 947  KALGQALQFNRSLTSLDLQENAIGDEGVCAVANALKANTALTALYLQVTSIGAPGAQALG 1006

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
            +ALS   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+ 
Sbjct: 1007 EALSVNRTLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALS 1066

Query: 431  NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                L+ IN+  N  GE G   + + +K+
Sbjct: 1067 GNHGLQHINLQGNHIGESGARMISEAIKT 1095



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA----------------------- 256
           SL     L  LDL  N+ GP G + LAD L+ +   A                       
Sbjct: 728 SLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGSRSIAEALAA 787

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              L  L L  N +G TG + ++ AL       K+  S   LK  +   N + + GAK L
Sbjct: 788 NRTLSVLHLQKNTIGPTGAQRMADAL-------KQNRS---LKELMFSSNSIGDGGAKAL 837

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + L+ +++  N I   G+ AL  A   N+ L  LNL +N+I+ +GA  L +AL
Sbjct: 838 AEALKVNQGLQSLDLQSNSISDTGVAALMGALCANRTLLSLNLRENSISPEGAQHLARAL 897

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L  L+L   LL   GA +IA  + +N  L  ++L  N I       L +A++   
Sbjct: 898 CTNSTLKNLDLTANLLHDQGAQAIAVAVRENHALTSLHLQWNFIQAGAAKALGQALQFNR 957

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EGV  +   +K+     AL L+
Sbjct: 958 SLTSLDLQENAIGDEGVCAVANALKANTALTALYLQ 993



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 165/411 (40%), Gaps = 59/411 (14%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G  ++++A   N+ L  L+L  NTI   GA  +  A
Sbjct: 753  LADALKINRTLASLSLQSNRIRDDGSRSIAEALAANRTLSVLHLQKNTIGPTGAQRMADA 812

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L +  SL  L      +   GA ++A+ L  N  L+ ++L  N IS  G   L+ A+   
Sbjct: 813  LKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLQSLDLQSNSISDTGVAALMGALCAN 872

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L  +N+ EN    EG + + + +                 C++          N    
Sbjct: 873  RTLLSLNLRENSISPEGAQHLARAL-----------------CTNSTLKNLDLTANLLHD 915

Query: 182  EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
            +G  +       NH+  + +   N        +     +L+    L  LDL +NA G  G
Sbjct: 916  QGAQAIAVAVRENHALTSLHLQWNFIQA--GAAKALGQALQFNRSLTSLDLQENAIGDEG 973

Query: 242  VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
            V  +A+ L+++   AL  L L    +G  G + L +AL                      
Sbjct: 974  VCAVANALKANT--ALTALYLQVTSIGAPGAQALGEAL---------------------S 1010

Query: 302  RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
             NR                 TLE +++  N I   G  AL++A + N +LR LNL +N++
Sbjct: 1011 VNR-----------------TLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSL 1053

Query: 362  TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
               GAI +  ALS    L  +NL    +  +GA  I++ +  N  L  V +
Sbjct: 1054 GMDGAICVATALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPLCTVEM 1104


>gi|452001819|gb|EMD94278.1| hypothetical protein COCHEDRAFT_1222828 [Cochliobolus
           heterostrophus C5]
          Length = 420

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 118/231 (51%), Gaps = 10/231 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY-- 283
           +L  +DLSDNAFG   V  L D L  S    L  L LNNNGLG     L++ AL      
Sbjct: 96  KLHTVDLSDNAFGLNTVAPLVDFL--SQHTPLRYLYLNNNGLGPAAGVLVADALTALAAK 153

Query: 284 -ESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
            E+++KEG  +  L++ I GRNRLEN      A  +     ++ ++M QNGI   GI+ L
Sbjct: 154 KEAARKEGKDVPDLELVICGRNRLENGSMAAWAKAYAANSGVKTIKMTQNGIRQEGISHL 213

Query: 342 -SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            ++       L  L+L DNT T  GA  L QA+     L  L +GDCLL S G  ++A  
Sbjct: 214 ITNGLAHLTKLDTLDLQDNTFTAMGAKALSQAVVNWTDLRELGVGDCLLSSRGGIALAAA 273

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEE 448
           L    N  +E + L  NEI+ +G   L  A       L++I ++ N+F EE
Sbjct: 274 LEKGKNKKVEVLRLQFNEINAKGLAGLASASSTALPLLRRIEINGNKFDEE 324



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 4/130 (3%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++M QNGI   GI+ L ++      KL  L+L DNT T  GA  L QA+     L  
Sbjct: 195 VKTIKMTQNGIRQEGISHLITNGLAHLTKLDTLDLQDNTFTAMGAKALSQAVVNWTDLRE 254

Query: 71  LNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQI 127
           L +GDCLL S G  ++A  L    N  +E + L  NEI+ +G   L  A       L++I
Sbjct: 255 LGVGDCLLSSRGGIALAAALEKGKNKKVEVLRLQFNEINAKGLAGLASASSTALPLLRRI 314

Query: 128 NVSENQFGEE 137
            ++ N+F EE
Sbjct: 315 EINGNKFDEE 324


>gi|358398804|gb|EHK48155.1| hypothetical protein TRIATDRAFT_47694 [Trichoderma atroviride IMI
           206040]
          Length = 418

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 131/257 (50%), Gaps = 14/257 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDCY 283
           L  ++L+DNAFG      L   L S     L+ L LNNNGLG     L++ AL   H   
Sbjct: 97  LTTVNLNDNAFGLNTQAPLVAFLSSHV--PLQHLHLNNNGLGPHAGILVADALSELHAKK 154

Query: 284 ESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL- 341
           E+++KEG  +  L+  I GRNRLEN      A  +     ++ ++M QNGI   GI+ L 
Sbjct: 155 EAARKEGKEVPHLETVICGRNRLENGSMAAWAKAYSLHNKIKEIKMVQNGIRQEGISRLL 214

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           S+       L+ L+L DNT T  GA  L + +     L  L +GD LL + G+  +A  L
Sbjct: 215 SEGLNHASELKILDLQDNTFTIMGARALAKVVPTWADLQELGVGDSLLSAKGSLLLADAL 274

Query: 402 TD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGVEEMEKL 456
           +   N  LE + L  N+I  +G   L ++ K     L++I ++ N+F E  E +  +++L
Sbjct: 275 SQGKNKKLETLRLQYNDIKAEGVKQLARSAKTALPALRRIELNGNKFTEDDESILNLQEL 334

Query: 457 M--KSFGMAAALVLEDD 471
           +  +    A  +V+ED+
Sbjct: 335 LEERKEKFAGDIVIEDE 351



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 8/159 (5%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++M QNGI   GI+ L S+      +L+ L+L DNT T  GA  L + +     L  
Sbjct: 195 IKEIKMVQNGIRQEGISRLLSEGLNHASELKILDLQDNTFTIMGARALAKVVPTWADLQE 254

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GD LL + G+  +A  L+   N  LE + L  N+I  +G   L ++ K     L++I
Sbjct: 255 LGVGDSLLSAKGSLLLADALSQGKNKKLETLRLQYNDIKAEGVKQLARSAKTALPALRRI 314

Query: 128 NVSENQFGE--EGVEEMEKLM--KSFGMAAALVLEDDEG 162
            ++ N+F E  E +  +++L+  +    A  +V+ED+ G
Sbjct: 315 ELNGNKFTEDDESILNLQELLEERKEKFAGDIVIEDEWG 353


>gi|241952831|ref|XP_002419137.1| GTPase activating protein, putative; RaN GTPase-activating protein
           homologue, putative [Candida dubliniensis CD36]
 gi|223642477|emb|CAX42726.1| GTPase activating protein, putative [Candida dubliniensis CD36]
          Length = 414

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 125/236 (52%), Gaps = 9/236 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ +   L  +   ++E L L+NNG+G      +  +L    ++ K  
Sbjct: 110 INLSDNAFGLQTIDPIEVYLAKAV--SIEHLILSNNGMGPFAGSRIGGSLFKLAKAKKAA 167

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEEN 348
           G   +LK FI GRNRLEN     L+   +  K LE V + QNGI   GI+ L +     N
Sbjct: 168 GKD-SLKTFICGRNRLENGSVNYLSVGLRNHKDLEVVRLYQNGIRPAGISKLVEQGLSNN 226

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNT 405
           K L+ L+L DNTIT +GAI + ++LS  PSL  LNL D LLK+ G+  + +      +  
Sbjct: 227 KKLKVLDLQDNTITTRGAIHIAESLSNWPSLVELNLNDSLLKNKGSLKLVEAFHVGDEKP 286

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKSF 460
            L  + L  NE+       L  A+ +K  +LK + ++ N+F EE  E + K+   F
Sbjct: 287 QLITLKLQYNELETDSLRVLADAIASKLPQLKFLELNGNRF-EEDSEHIAKINGIF 341



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K LE V + QNGI   GI+ L +     NKKL+ L+L DNTIT +GAI + ++LS  PSL
Sbjct: 198 KDLEVVRLYQNGIRPAGISKLVEQGLSNNKKLKVLDLQDNTITTRGAIHIAESLSNWPSL 257

Query: 69  AILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKL 124
             LNL D LLK+ G+  + +      +   L  + L  NE+       L  A+ +K  +L
Sbjct: 258 VELNLNDSLLKNKGSLKLVEAFHVGDEKPQLITLKLQYNELETDSLRVLADAIASKLPQL 317

Query: 125 KQINVSENQFGEEGVEEMEKLMKSF 149
           K + ++ N+F EE  E + K+   F
Sbjct: 318 KFLELNGNRF-EEDSEHIAKINGIF 341


>gi|255714761|ref|XP_002553662.1| KLTH0E04136p [Lachancea thermotolerans]
 gi|238935044|emb|CAR23225.1| KLTH0E04136p [Lachancea thermotolerans CBS 6340]
          Length = 410

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 107/198 (54%), Gaps = 8/198 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           RL  ++LSDNAFG   ++ L   +RS+    LE L L+NNG+G    + + KAL+   + 
Sbjct: 109 RLSIVNLSDNAFGLRTIDSLEHYIRSAV--QLEHLILSNNGMGPFAGERIGKALYQLAQR 166

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGI-TALSD 343
            K  GSPL L+ FI GRNRLEN  A  LA   K     L+ V++ QNGI   G+ T +  
Sbjct: 167 KKAAGSPL-LETFICGRNRLENGSAAHLALGLKAHGAGLKVVKLYQNGIRPRGVATLIRH 225

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
               N  L+ L+L DNT T   +  L + L     SL  LN+ DCLLK +G+  +AK L 
Sbjct: 226 GLRHNTALQVLDLQDNTFTTVASAALAETLPVWRDSLVELNVNDCLLKGSGSDLVAKALQ 285

Query: 403 --DNTTLEDVNLTCNEIS 418
             +   L  + L  NE++
Sbjct: 286 AYEFPQLHALRLQYNELT 303



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +      N  L+ L+L DNT T   +  L + L     SL 
Sbjct: 204 LKVVKLYQNGIRPRGVATLIRHGLRHNTALQVLDLQDNTFTTVASAALAETLPVWRDSLV 263

Query: 70  ILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEIS 107
            LN+ DCLLK +G+  +AK L   +   L  + L  NE++
Sbjct: 264 ELNVNDCLLKGSGSDLVAKALQAYEFPQLHALRLQYNELT 303


>gi|390471247|ref|XP_003734453.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Callithrix jacchus]
          Length = 1187

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 790  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKGLADALKINRTLTSL 849

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    +K  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 850  SLQGNTIKDDGARSMAEALASNRTLSVLHLQKNSIGPTGAQWMADALKQNRSLKELMLSS 909

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K              G    E  D +S   +D+        L  N
Sbjct: 910  NSIGDGGAKALAEALK--------------GNQGLESLDLQSNSISDTGVAALMGALCTN 955

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L L +N+  P G + +A  LR+
Sbjct: 956  QA---------------------------------LLSLSLRENSISPEGAKAIARALRA 982

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +            AL       N ++   A+
Sbjct: 983  NS--TLKNLDLTANLLHDQGAQAVAGAVRENR----------ALTSLHLQWNFIQAGAAQ 1030

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            +L    +  ++L  +++ +N I   G+ A++ A + N  L  L L   +I   GA  LG+
Sbjct: 1031 VLGQALQLNRSLTSLDLQENDIGDEGVCAVARALKVNTALTALYLQVASIGAPGAQVLGE 1090

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 1091 ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAIFIATALSG 1150

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  G+ G   + +++K+
Sbjct: 1151 NHRLQHINLQGNHIGDSGARMISEVIKT 1178



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 36/269 (13%)

Query: 227  LVELDLSDNAFGPIGVEGLADLL---RSSCCFALEE-----------------------L 260
            L  LDL  N+ GP G +GLAD L   R+    +L+                        L
Sbjct: 818  LTSLDLRGNSIGPQGAKGLADALKINRTLTSLSLQGNTIKDDGARSMAEALASNRTLSVL 877

Query: 261  KLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
             L  N +G TG + ++ AL       K+  S   LK  +   N + + GAK LA   K  
Sbjct: 878  HLQKNSIGPTGAQWMADAL-------KQNRS---LKELMLSSNSIGDGGAKALAEALKGN 927

Query: 321  KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
            + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  + +AL    +L 
Sbjct: 928  QGLESLDLQSNSISDTGVAALMGALCTNQALLSLSLRENSISPEGAKAIARALRANSTLK 987

Query: 381  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
             L+L   LL   GA ++A  + +N  L  ++L  N I       L +A++    L  +++
Sbjct: 988  NLDLTANLLHDQGAQAVAGAVRENRALTSLHLQWNFIQAGAAQVLGQALQLNRSLTSLDL 1047

Query: 441  SENQFGEEGVEEMEKLMKSFGMAAALVLE 469
             EN  G+EGV  + + +K      AL L+
Sbjct: 1048 QENDIGDEGVCAVARALKVNTALTALYLQ 1076



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 175/429 (40%), Gaps = 83/429 (19%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G   L+DA + N+ L  L+L  NTI   GA  + +AL+   +L+
Sbjct: 816  RSLTSLDLRGNSIGPQGAKGLADALKINRTLTSLSLQGNTIKDDGARSMAEALASNRTLS 875

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++ L+ N I   G   L +A+K    L+ +++
Sbjct: 876  VLHLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGGAKALAEALKGNQGLESLDL 935

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 936  QSNSISDTGV---AALMGAL--------------CTNQALLSLSLRENSISPEGAKAIAR 978

Query: 184  ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMS---LKTGA---------- 225
                NS L + D  +N  H+   Q+   + + +      H+    ++ GA          
Sbjct: 979  ALRANSTLKNLDLTANLLHDQGAQAVAGAVRENRALTSLHLQWNFIQAGAAQVLGQALQL 1038

Query: 226  --RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
               L  LDL +N  G  GV           C     LK+N              AL   Y
Sbjct: 1039 NRSLTSLDLQENDIGDEGV-----------CAVARALKVNT-------------ALTALY 1074

Query: 284  ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                  G+P                GA++L       +TLE +++  N I   G  AL++
Sbjct: 1075 LQVASIGAP----------------GAQVLGEALAVNRTLEILDLRGNAIGVAGAKALAN 1118

Query: 344  AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  
Sbjct: 1119 ALKVNSSLRRLNLQENSLGMDGAIFIATALSGNHRLQHINLQGNHIGDSGARMISEVIKT 1178

Query: 404  NTTLEDVNL 412
            N  +  V +
Sbjct: 1179 NAPMCTVEM 1187



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 79/157 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  + +A
Sbjct: 920  LAEALKGNQGLESLDLQSNSISDTGVAALMGALCTNQALLSLSLRENSISPEGAKAIARA 979

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L+L   LL   GA ++A  + +N  L  ++L  N I       L +A++  
Sbjct: 980  LRANSTLKNLDLTANLLHDQGAQAVAGAVRENRALTSLHLQWNFIQAGAAQVLGQALQLN 1039

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
              L  +++ EN  G+EGV  + + +K      AL L+
Sbjct: 1040 RSLTSLDLQENDIGDEGVCAVARALKVNTALTALYLQ 1076



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 33/329 (10%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
             +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  
Sbjct: 891  WMADALKQNRSLKELMLSSNSIGDGGAKALAEALKGNQGLESLDLQSNSISDTGVAALMG 950

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            AL    +L  L+L +  +   GA +IA+ L  N+TL++++LT N +  QG   +  A++ 
Sbjct: 951  ALCTNQALLSLSLRENSISPEGAKAIARALRANSTLKNLDLTANLLHDQGAQAVAGAVRE 1010

Query: 121  KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
               L  +++  N F + G  ++       G A  L          +        +END  
Sbjct: 1011 NRALTSLHLQWN-FIQAGAAQV------LGQALQL----------NRSLTSLDLQENDIG 1053

Query: 181  AEGDNSNLSHNDSNHSHNASN-QSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
             EG  +       N +  A   Q  +          +   +L     L  LDL  NA G 
Sbjct: 1054 DEGVCAVARALKVNTALTALYLQVASIGAPGAQVLGE---ALAVNRTLEILDLRGNAIGV 1110

Query: 240  IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
             G + LA+ L+ +   +L  L L  N LG+ G   ++ AL          G+     + +
Sbjct: 1111 AGAKALANALKVNS--SLRRLNLQENSLGMDGAIFIATAL---------SGNHRLQHINL 1159

Query: 300  AGRNRLENEGAKMLAAVFKKLKTLERVEM 328
             G N + + GA+M++ V K    +  VEM
Sbjct: 1160 QG-NHIGDSGARMISEVIKTNAPMCTVEM 1187


>gi|242795412|ref|XP_002482583.1| ran GTPase activating protein 1 (RNA1 protein) [Talaromyces
           stipitatus ATCC 10500]
 gi|218719171|gb|EED18591.1| ran GTPase activating protein 1 (RNA1 protein) [Talaromyces
           stipitatus ATCC 10500]
          Length = 416

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 125/241 (51%), Gaps = 15/241 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           ++LSDNAFG      L D L  S    L+ L LNNNGLG     L++ AL +     E +
Sbjct: 98  VNLSDNAFGLNTQAPLVDYL--SRAVPLQHLILNNNGLGPKAGVLVADALTELAKQKEKA 155

Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSD 343
           + EG   PL L+  + GRNRLEN   +  A  +K   K +  V+M QNGI   GI+ L  
Sbjct: 156 RSEGKDVPL-LESIVCGRNRLENGSMEAWATAYKAHAKGMRSVKMTQNGIRQEGISLLLK 214

Query: 344 A-FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           A       L  L+L DNT T  G+  L + +    SL  L +GDCLL + G   +A+ L 
Sbjct: 215 AGLSHAAGLEVLDLQDNTFTLLGSNALAKVVQGWASLRELGVGDCLLSARGGIKVAQALA 274

Query: 403 --DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLM 457
              N  +E + L  N+I+ +G    + A K+    LK+I ++ N+F E+   +EE+  L+
Sbjct: 275 AGKNEKVETLRLQYNDINAEGVKQFLFAAKSSLPALKRIELNGNKFMEDDGNIEELRVLL 334

Query: 458 K 458
           +
Sbjct: 335 E 335



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDA-FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K +  V+M QNGI   GI+ L  A       L  L+L DNT T  G+  L + +    SL
Sbjct: 192 KGMRSVKMTQNGIRQEGISLLLKAGLSHAAGLEVLDLQDNTFTLLGSNALAKVVQGWASL 251

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L +GDCLL + G   +A+ L    N  +E + L  N+I+ +G    + A K+    LK
Sbjct: 252 RELGVGDCLLSARGGIKVAQALAAGKNEKVETLRLQYNDINAEGVKQFLFAAKSSLPALK 311

Query: 126 QINVSENQFGEE--GVEEMEKLMK 147
           +I ++ N+F E+   +EE+  L++
Sbjct: 312 RIELNGNKFMEDDGNIEELRVLLE 335


>gi|346321054|gb|EGX90654.1| ran GTPase activating protein 1 [Cordyceps militaris CM01]
          Length = 414

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 13/257 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  L+++DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 96  KLHTLNVNDNAFGLNTQAPLVAFL--AAHVPLQHLYLNNNGLGPHAGILIADALSSLHAK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E+++  G  +  L+  I GRNRLEN      A  ++    L  V+M QNGI   GI+  
Sbjct: 154 KEAARAAGQTVPDLETVICGRNRLENGSMTAWAKTYRLHSKLRVVKMVQNGIRQEGISHL 213

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L +      +L+ L+L DNT T +G+  L     K  SL  L +GDCLL   GA  +A  
Sbjct: 214 LREGLLHATDLQALDLQDNTFTLRGSQALAAVAPKWASLRELAVGDCLLGGKGAVLVAAA 273

Query: 401 LTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKL 456
           L    N  LE + L  N+++  G     KA KN   LK+I ++ N+F EE   V  +++L
Sbjct: 274 LAQGKNAKLETLRLQFNDMTPAGVEGFAKAAKNLPALKRIELNGNKFEEEDASVTVLQEL 333

Query: 457 M--KSFGMAAALVLEDD 471
           +  +   +   L++ED+
Sbjct: 334 LEERKEAVGGDLIVEDE 350



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 7/168 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  ++    L  V+M QNGI   GI+  L +       L+ L+L DNT T +G+  L  
Sbjct: 185 WAKTYRLHSKLRVVKMVQNGIRQEGISHLLREGLLHATDLQALDLQDNTFTLRGSQALAA 244

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAM 118
              K  SL  L +GDCLL   GA  +A  L    N  LE + L  N+++  G     KA 
Sbjct: 245 VAPKWASLRELAVGDCLLGGKGAVLVAAALAQGKNAKLETLRLQFNDMTPAGVEGFAKAA 304

Query: 119 KNKTKLKQINVSENQFGEE--GVEEMEKLM--KSFGMAAALVLEDDEG 162
           KN   LK+I ++ N+F EE   V  +++L+  +   +   L++ED+ G
Sbjct: 305 KNLPALKRIELNGNKFEEEDASVTVLQELLEERKEAVGGDLIVEDEWG 352


>gi|320165903|gb|EFW42802.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1209

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 181/413 (43%), Gaps = 34/413 (8%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L +N+N I   GA  +G ALS L +L+ L+L    +   GA +IA+ L   T L    + 
Sbjct: 402 LWMNNNQIGNVGAQAIGSALSNLVNLSFLDLSYNKIGDVGARAIAEGLQALTALTKFRMN 461

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEG 162
            N+I   G   +  A++NK  L  +   EN+ G+ G   + + +++      LV+     
Sbjct: 462 NNQIGDAGAQAIGSALRNKANLSTL---ENKIGDAGARAIAEGLQTSKALTELVMS---- 514

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLK 222
                     S +  D+ A+   + L      +  N +N   + +      +      LK
Sbjct: 515 ----------SNQIGDAGAKAIGTAL-----RNKANLTNLCLHENKIGDAGARAIAEGLK 559

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           T   L EL +  N  G  G + +   LR+     L  L L  N +G TG   +++ L   
Sbjct: 560 TSKALTELGMYANQIGDAGAQAIGSALRNKAKLCL--LDLGENKIGDTGACAIAEGL--- 614

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
                 +GS  AL  F    N++ N GA+ + +  +    L  V +  N I   G  A++
Sbjct: 615 ------QGST-ALTDFRMNNNQIGNAGAQAIGSALRNKADLSSVHLGSNKIGDAGACAIA 667

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +  +   +L  L ++ N I   GA  +G AL    +L++L +G   +  AGA +IA+ L 
Sbjct: 668 EGLQTTTSLIQLWMHANQIGDVGAQAIGSALRNKANLSVLLMGSNRIGDAGARAIAEGLQ 727

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            +T L    +  N+I   G L +  +++NK  L  +++S NQ     V+ + +
Sbjct: 728 TSTALTHFKMHVNQIGDTGALAIESSLRNKPLLAILHLSRNQISASAVQRLSQ 780



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 205/490 (41%), Gaps = 88/490 (17%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           H+E+  N I   G  A+++    +  L  L+++ N I   GA P+G AL    +L+ L++
Sbjct: 253 HLEL--NHIGDTGARAIAEGLHASTALTDLSMSSNQIGDAGAQPIGYALRNKENLSTLDM 310

Query: 74  GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSEN 132
              ++  AGA +IA  L     L ++ L  N+I+  G   +  A++NK  +L ++ ++ N
Sbjct: 311 SSNMIGDAGAHAIADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLFRLCLNWN 370

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
           + G+ G   + +     G+A +  L   E  CS                      L+ + 
Sbjct: 371 KIGDFGARAIAE-----GVAVSTALASLE-YCS----------------------LAFD- 401

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
                        N+NQ  N   Q+  S L     L  LDLS N  G +G   +A+ L++
Sbjct: 402 ----------LWMNNNQIGNVGAQAIGSALSNLVNLSFLDLSYNKIGDVGARAIAEGLQA 451

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALH-------------DCYESSKKEG--SPLALK 296
               AL + ++NNN +G  G + +  AL              D    +  EG  +  AL 
Sbjct: 452 --LTALTKFRMNNNQIGDAGAQAIGSALRNKANLSTLENKIGDAGARAIAEGLQTSKALT 509

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
             +   N++ + GAK +    +    L  + + +N I   G  A+++  + +K L  L +
Sbjct: 510 ELVMSSNQIGDAGAKAIGTALRNKANLTNLCLHENKIGDAGARAIAEGLKTSKALTELGM 569

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             N I   GA  +G AL     L +L+LG+  +   GA +IA+ L  +T L D  +  N+
Sbjct: 570 YANQIGDAGAQAIGSALRNKAKLCLLDLGENKIGDTGACAIAEGLQGSTALTDFRMNNNQ 629

Query: 417 ISVQGGLDLVKAMKNK----------------------------TKLKQINVSENQFGEE 448
           I   G   +  A++NK                            T L Q+ +  NQ G+ 
Sbjct: 630 IGNAGAQAIGSALRNKADLSSVHLGSNKIGDAGACAIAEGLQTTTSLIQLWMHANQIGDV 689

Query: 449 GVEEMEKLMK 458
           G + +   ++
Sbjct: 690 GAQAIGSALR 699



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 210/498 (42%), Gaps = 57/498 (11%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I  VG  A+++  +    L    +  N I   GA  +G AL     L++L L +  + 
Sbjct: 32  NDIGDVGARAIAEGLQAATALASFEMQANKIGDAGAQAIGSALRNKAKLSVLYLEENKIG 91

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           + GAS+IA  L  ++ L ++ +  N+IS  G   +  A++NK  L  +++SEN  G+ G 
Sbjct: 92  AVGASAIAAGLQTSSALTELRMENNQISDAGAQAIGSALRNKANLSILSLSENMIGDAGA 151

Query: 140 EEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS--HNDSNHSH 197
                  ++ G               D+ Q  ++  +    A  + +NLS  + D N   
Sbjct: 152 -------RAIGEGLQTTSTLLTTLWMDKNQIGDAGAQAIGSALRNKANLSTLYLDENKIG 204

Query: 198 NASNQSHNNSNQSHNTSNQSHM---------------SLKTGARLVELDLSDNAFGPIGV 242
           +A  ++     Q      +  M               +L+  ++L+ L L  N  G  G 
Sbjct: 205 DAGARAIAEGVQGSTALTELRMHRNQIGDAGAQAIGPALRNKSKLLRLHLELNHIGDTGA 264

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH----------------DCYESS 286
             +A+ L +S   AL +L +++N +G  G + +  AL                 D    +
Sbjct: 265 RAIAEGLHAST--ALTDLSMSSNQIGDAGAQPIGYALRNKENLSTLDMSSNMIGDAGAHA 322

Query: 287 KKEG--SPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSD 343
             +G  +  AL      +N++ + GA+ +A   +  K  L R+ +  N I   G  A+++
Sbjct: 323 IADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLFRLCLNWNKIGDFGARAIAE 382

Query: 344 AFEENKNLRHLN---------LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
               +  L  L          +N+N I   GA  +G ALS L +L+ L+L    +   GA
Sbjct: 383 GVAVSTALASLEYCSLAFDLWMNNNQIGNVGAQAIGSALSNLVNLSFLDLSYNKIGDVGA 442

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            +IA+ L   T L    +  N+I   G   +  A++NK  L  +   EN+ G+ G   + 
Sbjct: 443 RAIAEGLQALTALTKFRMNNNQIGDAGAQAIGSALRNKANLSTL---ENKIGDAGARAIA 499

Query: 455 KLMKSFGMAAALVLEDDE 472
           + +++      LV+  ++
Sbjct: 500 EGLQTSKALTELVMSSNQ 517



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 115/521 (22%), Positives = 215/521 (41%), Gaps = 67/521 (12%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +  +    L  + + +N I  VG +A++   + +  L  L + +N I+  GA  +G A
Sbjct: 70  IGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTELRMENNQISDAGAQAIGSA 129

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    +L+IL+L + ++  AGA +I +   T +T L  + +  N+I   G   +  A++N
Sbjct: 130 LRNKANLSILSLSENMIGDAGARAIGEGLQTTSTLLTTLWMDKNQIGDAGAQAIGSALRN 189

Query: 121 KTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN-- 177
           K  L  + + EN+ G+ G   + E +  S  +    +  +  G+   +        ++  
Sbjct: 190 KANLSTLYLDENKIGDAGARAIAEGVQGSTALTELRMHRNQIGDAGAQAIGPALRNKSKL 249

Query: 178 -----DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELD 231
                + +  GD    +  +  H+  A      +SNQ  +   Q    +L+    L  LD
Sbjct: 250 LRLHLELNHIGDTGARAIAEGLHASTALTDLSMSSNQIGDAGAQPIGYALRNKENLSTLD 309

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD--------CY 283
           +S N  G  G   +AD L +    AL ELKL  N +   G + ++ AL +        C 
Sbjct: 310 MSSNMIGDAGAHAIADGLLT--LPALTELKLEKNQITDMGAQSIAVALRNKKAQLFRLCL 367

Query: 284 ESSK---------KEG------------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
             +K          EG              LA  +++   N++ N GA+ + +    L  
Sbjct: 368 NWNKIGDFGARAIAEGVAVSTALASLEYCSLAFDLWM-NNNQIGNVGAQAIGSALSNLVN 426

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           L  +++  N I  VG  A+++  +    L    +N+N I   GA  +G AL    +L+ L
Sbjct: 427 LSFLDLSYNKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAGAQAIGSALRNKANLSTL 486

Query: 383 --NLGDCLLKS-----------------------AGASSIAKYLTDNTTLEDVNLTCNEI 417
              +GD   ++                       AGA +I   L +   L ++ L  N+I
Sbjct: 487 ENKIGDAGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALRNKANLTNLCLHENKI 546

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              G   + + +K    L ++ +  NQ G+ G + +   ++
Sbjct: 547 GDAGARAIAEGLKTSKALTELGMYANQIGDAGAQAIGSALR 587



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 177/425 (41%), Gaps = 67/425 (15%)

Query: 48  NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 107
           N I   GA  +G AL     L +L LG   +   GA +IA+ L   T L    +  N+I 
Sbjct: 4   NHIGDTGARAIGLALRNKTRLTMLCLGMNDIGDVGARAIAEGLQAATALASFEMQANKIG 63

Query: 108 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDE 167
             G   +  A++NK KL  + + EN+ G  G   +   +++      L +E++       
Sbjct: 64  DAGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTELRMENN------- 116

Query: 168 EQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLK----- 222
                  + +D+ A+   S L                       N +N S +SL      
Sbjct: 117 -------QISDAGAQAIGSAL----------------------RNKANLSILSLSENMIG 147

Query: 223 -TGARLV------------ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
             GAR +             L +  N  G  G + +   LR+     L  L L+ N +G 
Sbjct: 148 DAGARAIGEGLQTTSTLLTTLWMDKNQIGDAGAQAIGSALRNKA--NLSTLYLDENKIGD 205

Query: 270 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
            G + +++ +         +GS  AL      RN++ + GA+ +    +    L R+ + 
Sbjct: 206 AGARAIAEGV---------QGST-ALTELRMHRNQIGDAGAQAIGPALRNKSKLLRLHLE 255

Query: 330 QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 389
            N I   G  A+++    +  L  L+++ N I   GA P+G AL    +L+ L++   ++
Sbjct: 256 LNHIGDTGARAIAEGLHASTALTDLSMSSNQIGDAGAQPIGYALRNKENLSTLDMSSNMI 315

Query: 390 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEE 448
             AGA +IA  L     L ++ L  N+I+  G   +  A++N K +L ++ ++ N+ G+ 
Sbjct: 316 GDAGAHAIADGLLTLPALTELKLEKNQITDMGAQSIAVALRNKKAQLFRLCLNWNKIGDF 375

Query: 449 GVEEM 453
           G   +
Sbjct: 376 GARAI 380



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +    L  L  +++  N I  VG  A+++  +    L    +N+N I   GA  +G A
Sbjct: 417 IGSALSNLVNLSFLDLSYNKIGDVGARAIAEGLQALTALTKFRMNNNQIGDAGAQAIGSA 476

Query: 62  LSKLPSLAIL--NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L    +L+ L   +GD     AGA +IA+ L  +  L ++ ++ N+I   G   +  A++
Sbjct: 477 LRNKANLSTLENKIGD-----AGARAIAEGLQTSKALTELVMSSNQIGDAGAKAIGTALR 531

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS------FGMAAALVLEDDEGECSDEEQDEES 173
           NK  L  + + EN+ G+ G   + + +K+       GM A  +   D G      Q   S
Sbjct: 532 NKANLTNLCLHENKIGDAGARAIAEGLKTSKALTELGMYANQI--GDAGA-----QAIGS 584

Query: 174 EEENDS---------DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS-LKT 223
              N +         +  GD    +  +      A      N+NQ  N   Q+  S L+ 
Sbjct: 585 ALRNKAKLCLLDLGENKIGDTGACAIAEGLQGSTALTDFRMNNNQIGNAGAQAIGSALRN 644

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
            A L  + L  N  G  G   +A+ L+++   +L +L ++ N +G  G + +  AL +  
Sbjct: 645 KADLSSVHLGSNKIGDAGACAIAEGLQTTT--SLIQLWMHANQIGDVGAQAIGSALRNKA 702

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                      L V + G NR+ + GA+ +A   +    L   +M  N I   G  A+  
Sbjct: 703 N----------LSVLLMGSNRIGDAGARAIAEGLQTSTALTHFKMHVNQIGDTGALAIES 752

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           +      L  L+L+ N I+      L Q++
Sbjct: 753 SLRNKPLLAILHLSRNQISASAVQRLSQSV 782



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 53/114 (46%)

Query: 359 NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           N I   GA  +G AL     L +L LG   +   GA +IA+ L   T L    +  N+I 
Sbjct: 4   NHIGDTGARAIGLALRNKTRLTMLCLGMNDIGDVGARAIAEGLQAATALASFEMQANKIG 63

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             G   +  A++NK KL  + + EN+ G  G   +   +++      L +E+++
Sbjct: 64  DAGAQAIGSALRNKAKLSVLYLEENKIGAVGASAIAAGLQTSSALTELRMENNQ 117


>gi|171687241|ref|XP_001908561.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943582|emb|CAP69234.1| unnamed protein product [Podospora anserina S mat+]
          Length = 418

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 130/260 (50%), Gaps = 18/260 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 97  KLNTINLNDNAFGLNTQAPLVAFL--AAHVPLQHLYLNNNGLGPHAGILIADALSELHAK 154

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
            E ++K+G  +  L+  I GRNRLEN      A  F     ++ ++M QNGI   GI+ L
Sbjct: 155 KEEARKQGQDVPDLETVICGRNRLENGSMTAWAKTFSLHNKVKEIKMVQNGIRQEGISYL 214

Query: 342 -SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            S+       LR L+L DNT T KGA  L +       L  L +GD LL + G+  + + 
Sbjct: 215 LSEGLRHTSELRVLDLQDNTFTLKGAKALAKVAPGWTELLELGVGDSLLSAKGSVLLGES 274

Query: 401 LTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGV----E 451
           L    N  LE + L  N+I+  G   L +A K     LK+I ++ N+F E  E V    E
Sbjct: 275 LAQGKNRNLEILRLQYNDITAAGLKSLAEAAKEALPALKKIELNGNKFTEDDESVILLQE 334

Query: 452 EMEKLMKSFGMAAALVLEDD 471
            +E+  + FG    +V+EDD
Sbjct: 335 LLEERKEKFG--GDIVVEDD 352



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 85/170 (50%), Gaps = 12/170 (7%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           A  F     ++ ++M QNGI   GI+ L S+      +LR L+L DNT T KGA  L + 
Sbjct: 187 AKTFSLHNKVKEIKMVQNGIRQEGISYLLSEGLRHTSELRVLDLQDNTFTLKGAKALAKV 246

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
                 L  L +GD LL + G+  + + L    N  LE + L  N+I+  G   L +A K
Sbjct: 247 APGWTELLELGVGDSLLSAKGSVLLGESLAQGKNRNLEILRLQYNDITAAGLKSLAEAAK 306

Query: 120 NK-TKLKQINVSENQFGE--EGV----EEMEKLMKSFGMAAALVLEDDEG 162
                LK+I ++ N+F E  E V    E +E+  + FG    +V+EDD G
Sbjct: 307 EALPALKKIELNGNKFTEDDESVILLQELLEERKEKFG--GDIVVEDDWG 354


>gi|194678537|ref|XP_584462.3| PREDICTED: protein NLRC3 [Bos taurus]
 gi|297490053|ref|XP_002697992.1| PREDICTED: protein NLRC3 [Bos taurus]
 gi|296473604|tpg|DAA15719.1| TPA: NLR family, CARD domain containing 3 [Bos taurus]
          Length = 1065

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 199/449 (44%), Gaps = 61/449 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 668  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA  +A+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 728  SLQSNRIRDDGARCMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSS 787

Query: 132  NQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N  G+ G + + E LM + G+               +  D +S   +D         L  
Sbjct: 788  NSIGDGGAKALAEALMVNQGL---------------KSLDLQSNSISDPGVAALMGALCT 832

Query: 191  NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
            N +                                 L+ L+L +N+  P G + LA  LR
Sbjct: 833  NQT---------------------------------LLSLNLRENSISPEGAQDLARALR 859

Query: 251  SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            ++    L+ L L  N L   G + +++A+ +      +  + L L+      N ++   A
Sbjct: 860  TNS--TLKSLDLTANLLHDQGAQAVAEAVRE-----NRTLTSLHLQW-----NFIQAGAA 907

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            K L    +   +L  +++ +N I   G +A++ A + N  L  L L   +I   GA  LG
Sbjct: 908  KALGQALQLNTSLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALG 967

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
            +AL+   +L IL+L    ++ AGA ++A  L  N++L+ +NL  N + ++G + +  A+ 
Sbjct: 968  EALAVNRTLEILDLRGNTIEVAGAKALASALKVNSSLQRLNLQENSLGMEGAICVATALS 1027

Query: 431  NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                L+ IN+  N  GE G   + + +K+
Sbjct: 1028 GNHGLRHINLQGNHIGESGARMISEAIKT 1056



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLR------------------SSCCFA----- 256
           SL     L  LDL  N+ GP G + LAD L+                   + C A     
Sbjct: 689 SLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNRIRDDGARCMAEALAT 748

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              L  L L  N +G  G + ++ AL       K+  S   LK  +   N + + GAK L
Sbjct: 749 NRTLSVLHLQKNSIGPVGTQQMADAL-------KQNRS---LKELMFSSNSIGDGGAKAL 798

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A      + L+ +++  N I   G+ AL  A   N+ L  LNL +N+I+ +GA  L +AL
Sbjct: 799 AEALMVNQGLKSLDLQSNSISDPGVAALMGALCTNQTLLSLNLRENSISPEGAQDLARAL 858

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L  L+L   LL   GA ++A+ + +N TL  ++L  N I       L +A++  T
Sbjct: 859 RTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQLNT 918

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K   +  AL L+
Sbjct: 919 SLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQ 954



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 154/366 (42%), Gaps = 63/366 (17%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  + + +N I  VG   ++DA ++N+ L+ L  + N+I   GA  L +AL     L 
Sbjct: 750  RTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAKALAEALMVNQGLK 809

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +   G +++   L  N TL  +NL  N IS +G  DL +A++  + LK +++
Sbjct: 810  SLDLQSNSISDPGVAALMGALCTNQTLLSLNLRENSISPEGAQDLARALRTNSTLKSLDL 869

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   ++G + +                                    ++A  +N  L+
Sbjct: 870  TANLLHDQGAQAV------------------------------------AEAVRENRTLT 893

Query: 190  --HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
              H   N     + ++   + Q  NTS            L  LDL +NA G  G   +A 
Sbjct: 894  SLHLQWNFIQAGAAKALGQALQ-LNTS------------LTSLDLQENAIGDEGASAVAS 940

Query: 248  LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
             L+ +    L  L L    +G  G + L +AL               L++     N +E 
Sbjct: 941  ALKVNT--VLTALYLQVASIGAPGAQALGEAL----------AVNRTLEILDLRGNTIEV 988

Query: 308  EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
             GAK LA+  K   +L+R+ + +N +   G   ++ A   N  LRH+NL  N I   GA 
Sbjct: 989  AGAKALASALKVNSSLQRLNLQENSLGMEGAICVATALSGNHGLRHINLQGNHIGESGAR 1048

Query: 368  PLGQAL 373
             + +A+
Sbjct: 1049 MISEAI 1054



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 28/165 (16%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   +   TL+ +++  N ++  G  A+++A  EN+ L  L+L  N I    A  LGQA
Sbjct: 854  LARALRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQA 913

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--------------------------- 94
            L    SL  L+L +  +   GAS++A  L  NT                           
Sbjct: 914  LQLNTSLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVN 973

Query: 95   -TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             TLE ++L  N I V G   L  A+K  + L+++N+ EN  G EG
Sbjct: 974  RTLEILDLRGNTIEVAGAKALASALKVNSSLQRLNLQENSLGMEG 1018


>gi|302926367|ref|XP_003054282.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735223|gb|EEU48569.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 419

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 118/231 (51%), Gaps = 10/231 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 97  KLNTINLNDNAFGLNTQAPLVAFL--AAHVPLQHLYLNNNGLGPHAGILIADALSELHAK 154

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E+++K+G  +  L+  I GRNRLEN      A  +     ++ ++M QNGI   GI+  
Sbjct: 155 KEAARKDGQEVPDLETVICGRNRLENGSMTAWAKTYSLHNKIKEIKMVQNGIRQEGISHL 214

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS    +   LR L+L DNT T  GA  L + +S    L  L +GD LL + G   +A  
Sbjct: 215 LSQGLNQATELRILDLQDNTFTVTGARALSKVVSNWTLLQELGVGDSLLGAKGGVLLAGA 274

Query: 401 LTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
           L+   NT LE + L  NEI+  G      A K+    LK+I ++ N+F E+
Sbjct: 275 LSKGANTKLETLRLQYNEITAAGVKGFAAAAKDGLPALKRIELNGNKFTED 325



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 8/159 (5%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++M QNGI   GI+  LS    +  +LR L+L DNT T  GA  L + +S    L  
Sbjct: 196 IKEIKMVQNGIRQEGISHLLSQGLNQATELRILDLQDNTFTVTGARALSKVVSNWTLLQE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GD LL + G   +A  L+   NT LE + L  NEI+  G      A K+    LK+I
Sbjct: 256 LGVGDSLLGAKGGVLLAGALSKGANTKLETLRLQYNEITAAGVKGFAAAAKDGLPALKRI 315

Query: 128 NVSENQFGE--EGVEEMEKLM--KSFGMAAALVLEDDEG 162
            ++ N+F E  E +  +++L+  +       +V EDD G
Sbjct: 316 ELNGNKFTEDDESILALQELLEERKEKNGGDVVAEDDWG 354



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 99/224 (44%), Gaps = 25/224 (11%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLA-LKVFIAGR--NRLENEGAKML 313
           +EE++L  N LG+  CKLL + L      + K+G  +A L     GR  N +    + +L
Sbjct: 36  VEEVRLLGNTLGVGACKLLGEVL------ATKKGLRVANLADIFTGRLLNEIPEALSSLL 89

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
            ++   L  L  + +  N         L      +  L+HL LN+N +     I +  AL
Sbjct: 90  TSIL-NLPKLNTINLNDNAFGLNTQAPLVAFLAAHVPLQHLYLNNNGLGPHAGILIADAL 148

Query: 374 SKL--------------PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
           S+L              P L  +  G   L++   ++ AK  + +  ++++ +  N I  
Sbjct: 149 SELHAKKEAARKDGQEVPDLETVICGRNRLENGSMTAWAKTYSLHNKIKEIKMVQNGIRQ 208

Query: 420 QGGLDLV-KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
           +G   L+ + +   T+L+ +++ +N F   G   + K++ ++ +
Sbjct: 209 EGISHLLSQGLNQATELRILDLQDNTFTVTGARALSKVVSNWTL 252


>gi|395835837|ref|XP_003790878.1| PREDICTED: protein NLRC3 [Otolemur garnettii]
          Length = 1065

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 191/448 (42%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINHTLISL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 728  SLQSNTIRDDGARSMAEALASNRTLSVLHLQKNTIGPMGAQRMADALKQNKNLKELMLSS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + MK                 S E  D +S   +D         L  N
Sbjct: 788  NSIGDGGTKALAEAMKV--------------NQSLESLDLQSNSISDVGVAALMGALCTN 833

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L+L +N+  P G + +A  L +
Sbjct: 834  QT---------------------------------LLSLNLRENSISPEGAQAVAHALCT 860

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L  L L  N L   G + ++ A+ +            AL       N ++   AK
Sbjct: 861  NS--TLRNLDLTANLLHDQGAQAIAAAVRENR----------ALTSLHLQWNFIQASAAK 908

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            +L    +  + L  +++ +N I   G +A++ A + N  L  L L   +I   GA  LG+
Sbjct: 909  VLGQALQLNRNLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGAPGAQALGE 968

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 969  ALAVNRTLEILDLRGNAIGVAGAKALASALKVNSSLRRLNLQENSLGMDGAICVATALSG 1028

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  GE G   + + +K+
Sbjct: 1029 NHRLQHINLQGNHIGESGARMISEAIKT 1056



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L +N +   G + +++AL
Sbjct: 689 SLLVNRSLTTLDLRSNSIGPQGAKALADALKIN--HTLISLSLQSNTIRDDGARSMAEAL 746

Query: 280 HD-----CYESSKKEGSPLA-------------LKVFIAGRNRLENEGAKMLAAVFKKLK 321
                       K    P+              LK  +   N + + G K LA   K  +
Sbjct: 747 ASNRTLSVLHLQKNTIGPMGAQRMADALKQNKNLKELMLSSNSIGDGGTKALAEAMKVNQ 806

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           +LE +++  N I  VG+ AL  A   N+ L  LNL +N+I+ +GA  +  AL    +L  
Sbjct: 807 SLESLDLQSNSISDVGVAALMGALCTNQTLLSLNLRENSISPEGAQAVAHALCTNSTLRN 866

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL   GA +IA  + +N  L  ++L  N I       L +A++    L  +++ 
Sbjct: 867 LDLTANLLHDQGAQAIAAAVRENRALTSLHLQWNFIQASAAKVLGQALQLNRNLTSLDLQ 926

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G+EG   +   +K+     AL L+
Sbjct: 927 ENAIGDEGASAVASALKANTALTALYLQ 954



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 155/381 (40%), Gaps = 49/381 (12%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K   TL  + +  N I   G  ++++A   N+ L  L+L  NTI   GA  +  A
Sbjct: 714  LADALKINHTLISLSLQSNTIRDDGARSMAEALASNRTLSVLHLQKNTIGPMGAQRMADA 773

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L +  +L  L L    +   G  ++A+ +  N +LE ++L  N IS  G   L+ A+   
Sbjct: 774  LKQNKNLKELMLSSNSIGDGGTKALAEAMKVNQSLESLDLQSNSISDVGVAALMGALCTN 833

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L  +N+ EN    EG +          +A AL        C+           N +  
Sbjct: 834  QTLLSLNLRENSISPEGAQ---------AVAHAL--------CT-----------NSTLR 865

Query: 182  EGD-NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--------LKTGARLVELDL 232
              D  +NL H+    +  A+ + +      H   N    S        L+    L  LDL
Sbjct: 866  NLDLTANLLHDQGAQAIAAAVRENRALTSLHLQWNFIQASAAKVLGQALQLNRNLTSLDL 925

Query: 233  SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
             +NA G  G   +A  L+++   AL  L L    +G  G + L +AL             
Sbjct: 926  QENAIGDEGASAVASALKANT--ALTALYLQVASIGAPGAQALGEAL----------AVN 973

Query: 293  LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
              L++     N +   GAK LA+  K   +L R+ + +N +   G   ++ A   N  L+
Sbjct: 974  RTLEILDLRGNAIGVAGAKALASALKVNSSLRRLNLQENSLGMDGAICVATALSGNHRLQ 1033

Query: 353  HLNLNDNTITYKGAIPLGQAL 373
            H+NL  N I   GA  + +A+
Sbjct: 1034 HINLQGNHIGESGARMISEAI 1054



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            + L  +++ +N I   G +A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 918  RNLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLE 977

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 978  ILDLRGNAIGVAGAKALASALKVNSSLRRLNLQENSLGMDGAICVATALSGNHRLQHINL 1037

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  GE G   + + +K+
Sbjct: 1038 QGNHIGESGARMISEAIKT 1056


>gi|432924330|ref|XP_004080575.1| PREDICTED: protein NLRC3-like [Oryzias latipes]
          Length = 1133

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 179/410 (43%), Gaps = 59/410 (14%)

Query: 40   LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
            ++ L+L DN I+ KGA  L +AL    +L  LNL +  + S GA  +A+ L  N  L  +
Sbjct: 736  IQKLSLADNAISNKGAKALSRALLVNRTLTYLNLRNNNIGSKGAKFLAEALKMNQVLTSI 795

Query: 100  NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
            N   N I  +G   L + ++   KL  +NV +N+ G +G + +   +K       L+L  
Sbjct: 796  NFQNNSIEEEGAQALAEVLQCNRKLVSLNVRKNKIGADGAKRIADALKMNQTLTKLIL-- 853

Query: 160  DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM 219
                CS++               GD   ++  ++                          
Sbjct: 854  ----CSNQL--------------GDKGTVALAEA-------------------------- 869

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
             LK    L+ L L  N+    G+  L   LR +    L  L L  N +GI G K +++AL
Sbjct: 870  -LKLNQTLLSLQLQSNSISNRGMTALTKALRFN--HGLVTLNLRENSIGIEGAKNMAQAL 926

Query: 280  HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                    KE + L      A  N L +EG + ++A  K  + L  + +  N I      
Sbjct: 927  --------KENNSLQNLDLTA--NLLHDEGVQAISAAIKFNQGLTSLHLQWNFIKSTATK 976

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
             L++A   N  ++ L+L +N I  +G I L +AL    SL  L L      ++GA ++A+
Sbjct: 977  VLANALMSNATIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLCLQGVSAGTSGAVALAE 1036

Query: 400  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             L +N +L+ ++L  N I ++G   L  A+K    LK +N+ EN  G +G
Sbjct: 1037 ALMENQSLQTLDLRGNSIGMEGAKALANALKCNRSLKSLNLQENSLGMDG 1086



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 203/459 (44%), Gaps = 67/459 (14%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + +  N I + G  ALS A   N+ L +LNL +N I  KGA  L +AL     L  +
Sbjct: 736  IQKLSLADNAISNKGAKALSRALLVNRTLTYLNLRNNNIGSKGAKFLAEALKMNQVLTSI 795

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            N  +  ++  GA ++A+ L  N  L  +N+  N+I   G   +  A+K    L ++ +  
Sbjct: 796  NFQNNSIEEEGAQALAEVLQCNRKLVSLNVRKNKIGADGAKRIADALKMNQTLTKLILCS 855

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            NQ G++G         +  +A AL L                           N  L   
Sbjct: 856  NQLGDKG---------TVALAEALKL---------------------------NQTL--- 876

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGAR----LVELDLSDNAFGPIGVEGLAD 247
                    S Q  +NS      SN+   +L    R    LV L+L +N+ G  G + +A 
Sbjct: 877  -------LSLQLQSNS-----ISNRGMTALTKALRFNHGLVTLNLRENSIGIEGAKNMAQ 924

Query: 248  LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
             L+ +   +L+ L L  N L   G + +S A+        +  + L L+      N +++
Sbjct: 925  ALKENN--SLQNLDLTANLLHDEGVQAISAAI-----KFNQGLTSLHLQ-----WNFIKS 972

Query: 308  EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
               K+LA       T++ +++ +N I + G+  L++A + N +L+ L L   +    GA+
Sbjct: 973  TATKVLANALMSNATIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLCLQGVSAGTSGAV 1032

Query: 368  PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
             L +AL +  SL  L+L    +   GA ++A  L  N +L+ +NL  N + + G + +  
Sbjct: 1033 ALAEALMENQSLQTLDLRGNSIGMEGAKALANALKCNRSLKSLNLQENSLGMDGAIFIAT 1092

Query: 428  AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
            A+K   +L  IN+  N  GE G + +   +++  ++  +
Sbjct: 1093 ALKGNHQLAYINLQGNGIGESGAKVISDAIRATALSCVV 1131



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 163/399 (40%), Gaps = 61/399 (15%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
             LA   K  + L  +    N I   G  AL++  + N+KL  LN+  N I   GA  +  
Sbjct: 781  FLAEALKMNQVLTSINFQNNSIEEEGAQALAEVLQCNRKLVSLNVRKNKIGADGAKRIAD 840

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            AL    +L  L L    L   G  ++A+ L  N TL  + L  N IS +G   L KA++ 
Sbjct: 841  ALKMNQTLTKLILCSNQLGDKGTVALAEALKLNQTLLSLQLQSNSISNRGMTALTKALRF 900

Query: 121  KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
               L  +N+ EN  G EG + M + +K                            EN+S 
Sbjct: 901  NHGLVTLNLRENSIGIEGAKNMAQALK----------------------------ENNSL 932

Query: 181  AEGD-NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
               D  +NL H++   + +A                    ++K    L  L L  N    
Sbjct: 933  QNLDLTANLLHDEGVQAISA--------------------AIKFNQGLTSLHLQWNFIKS 972

Query: 240  IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
               + LA+ L S+    L  L L  N +G  G   L++AL             L L+   
Sbjct: 973  TATKVLANALMSNATIKL--LDLQENAIGNEGVIFLAEAL-----KVNTSLQTLCLQGVS 1025

Query: 300  AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
            AG       GA  LA    + ++L+ +++  N I   G  AL++A + N++L+ LNL +N
Sbjct: 1026 AG-----TSGAVALAEALMENQSLQTLDLRGNSIGMEGAKALANALKCNRSLKSLNLQEN 1080

Query: 360  TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            ++   GAI +  AL     LA +NL    +  +GA  I+
Sbjct: 1081 SLGMDGAIFIATALKGNHQLAYINLQGNGIGESGAKVIS 1119



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 76/145 (52%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            T++ +++ +N I + G+  L++A + N  L+ L L   +    GA+ L +AL +  SL  
Sbjct: 987  TIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLCLQGVSAGTSGAVALAEALMENQSLQT 1046

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    +   GA ++A  L  N +L+ +NL  N + + G + +  A+K   +L  IN+ 
Sbjct: 1047 LDLRGNSIGMEGAKALANALKCNRSLKSLNLQENSLGMDGAIFIATALKGNHQLAYINLQ 1106

Query: 131  ENQFGEEGVEEMEKLMKSFGMAAAL 155
             N  GE G + +   +++  ++  +
Sbjct: 1107 GNGIGESGAKVISDAIRATALSCVV 1131



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%)

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
           +++ L+L DN I+ KGA  L +AL    +L  LNL +  + S GA  +A+ L  N  L  
Sbjct: 735 HIQKLSLADNAISNKGAKALSRALLVNRTLTYLNLRNNNIGSKGAKFLAEALKMNQVLTS 794

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +N   N I  +G   L + ++   KL  +NV +N+ G +G + +   +K
Sbjct: 795 INFQNNSIEEEGAQALAEVLQCNRKLVSLNVRKNKIGADGAKRIADALK 843


>gi|451850000|gb|EMD63303.1| hypothetical protein COCSADRAFT_200888 [Cochliobolus sativus
           ND90Pr]
          Length = 420

 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 117/231 (50%), Gaps = 10/231 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY-- 283
           +L  +DLSDNAFG   V  L D L  S    L  L LNNNGLG     L++ AL      
Sbjct: 96  KLHTVDLSDNAFGLNTVAPLVDFL--SQHTPLRYLYLNNNGLGPAAGVLVADALTALAAK 153

Query: 284 -ESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
            E+++KEG  +  L++ I GRNRLEN      A  +     ++ ++M QNGI   GI+ L
Sbjct: 154 KEAARKEGKDVPDLELVICGRNRLENGSMAAWAKAYAANSGVKTIKMTQNGIRQEGISHL 213

Query: 342 -SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            ++       L  L+L DNT T  GA  L QA+     L  L +GDCLL S G   +A  
Sbjct: 214 ITNGLAHLTKLDTLDLQDNTFTAMGAKALSQAVVNWTDLRELGVGDCLLSSRGGILLAAA 273

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEE 448
           L    N  +E + L  NEI+ +G   L  A       L++I ++ N+F EE
Sbjct: 274 LEKGKNKKVEVLRLQFNEINAKGLAGLASASSTALPLLRRIEINGNKFDEE 324



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 4/130 (3%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++M QNGI   GI+ L ++      KL  L+L DNT T  GA  L QA+     L  
Sbjct: 195 VKTIKMTQNGIRQEGISHLITNGLAHLTKLDTLDLQDNTFTAMGAKALSQAVVNWTDLRE 254

Query: 71  LNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQI 127
           L +GDCLL S G   +A  L    N  +E + L  NEI+ +G   L  A       L++I
Sbjct: 255 LGVGDCLLSSRGGILLAAALEKGKNKKVEVLRLQFNEINAKGLAGLASASSTALPLLRRI 314

Query: 128 NVSENQFGEE 137
            ++ N+F EE
Sbjct: 315 EINGNKFDEE 324


>gi|444318912|ref|XP_004180113.1| hypothetical protein TBLA_0D00860 [Tetrapisispora blattae CBS 6284]
 gi|387513155|emb|CCH60594.1| hypothetical protein TBLA_0D00860 [Tetrapisispora blattae CBS 6284]
          Length = 408

 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 136/244 (55%), Gaps = 14/244 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  L+LSDNAFG   ++ L + +  +    L+ L L+NNG+G    + + KAL    ++
Sbjct: 109 KLTILNLSDNAFGLRTIDQLENYI--THAIHLKHLLLSNNGMGPFAGERIGKALFHLAQN 166

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGI-TALSD 343
            +   +P  L+ FI GRNRLEN  A  LA   K  K  L+ V++ QNGI   G+ T L+ 
Sbjct: 167 KESAKTP-YLETFICGRNRLENGSALYLALGLKAHKDGLKVVKLYQNGIRPKGVSTLLNY 225

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI-LNLGDCLLKSAGASSIAKYLT 402
             + NK+L  L+L DNT T   ++ L + L    S  I LNL DCLLK+AG+ ++ K + 
Sbjct: 226 GLQYNKSLEILDLQDNTFTSSASLILAKVLPIWKSTLIELNLNDCLLKTAGSDAVFKVVK 285

Query: 403 DNT--TLEDVNLTCNEISVQGGLD--LVKAMKNKT--KLKQINVSENQFGEEGVEEMEKL 456
           +NT   L+ +    NE+S Q  L+  L+ +++  +   L+ + ++ N+F EE  E ++ L
Sbjct: 286 ENTFPNLKTLKFEYNEMS-QETLENYLIPSIEGTSLPVLEHLEINGNRF-EEDSEPLDVL 343

Query: 457 MKSF 460
              F
Sbjct: 344 QAKF 347



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 10/146 (6%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ V++ QNGI   G+ T L+   + NK L  L+L DNT T   ++ L + L    S  I
Sbjct: 204 LKVVKLYQNGIRPKGVSTLLNYGLQYNKSLEILDLQDNTFTSSASLILAKVLPIWKSTLI 263

Query: 71  -LNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLD--LVKAMKNKT--K 123
            LNL DCLLK+AG+ ++ K + +NT   L+ +    NE+S Q  L+  L+ +++  +   
Sbjct: 264 ELNLNDCLLKTAGSDAVFKVVKENTFPNLKTLKFEYNEMS-QETLENYLIPSIEGTSLPV 322

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSF 149
           L+ + ++ N+F EE  E ++ L   F
Sbjct: 323 LEHLEINGNRF-EEDSEPLDVLQAKF 347


>gi|358367748|dbj|GAA84366.1| ran GTPase activating protein 1 (RNA1 protein) [Aspergillus
           kawachii IFO 4308]
          Length = 416

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 124/247 (50%), Gaps = 25/247 (10%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           ++LSDNAFG    + L D L       L  L LNNNG+G      ++KAL +     E +
Sbjct: 100 VNLSDNAFGANTQKPLVDFLARHT--PLRHLILNNNGMGPEAGSNIAKALTELAQRKEEA 157

Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSD 343
           +KEG   PL L+  + GRNRLEN      A  ++     +  V+M QNGI   GI+ L  
Sbjct: 158 RKEGKEVPL-LESIVCGRNRLENGSMAAWARAYEVHAAGMRSVKMTQNGIRQEGISMLL- 215

Query: 344 AFEENKNLRH------LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
                + LRH      L+L DNT T  G+  L   +S  PSL  L + DCLL   G   +
Sbjct: 216 ----KEGLRHCFALEVLDLQDNTFTIMGSTALAGVVSSWPSLRELGVSDCLLSGRGGVKV 271

Query: 398 AKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEE 452
           A+ L +  N  ++ + L  NEI+ +G    + A K     L++I ++ N F E+   V E
Sbjct: 272 AQALAEAKNQKVQTLRLQYNEITAEGVKQFLHATKTALPALRRIELNGNIFNEDDNNVTE 331

Query: 453 MEKLMKS 459
           + +++++
Sbjct: 332 LREILEA 338



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI+ L  +       L  L+L DNT T  G+  L   +S  PSL  
Sbjct: 196 MRSVKMTQNGIRQEGISMLLKEGLRHCFALEVLDLQDNTFTIMGSTALAGVVSSWPSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L + DCLL   G   +A+ L +  N  ++ + L  NEI+ +G    + A K     L++I
Sbjct: 256 LGVSDCLLSGRGGVKVAQALAEAKNQKVQTLRLQYNEITAEGVKQFLHATKTALPALRRI 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N F E+   V E+ +++++
Sbjct: 316 ELNGNIFNEDDNNVTELREILEA 338


>gi|340923957|gb|EGS18860.1| putative GTPase activating protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 423

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 114/235 (48%), Gaps = 18/235 (7%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L D L  S    L+ L LNNNGLG      ++ AL   H  
Sbjct: 97  KLNTINLNDNAFGYNLRNELVDFL--SQHVPLQHLYLNNNGLGPHAGSAVADALVELHAK 154

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI-TA 340
            E ++K G  +  L+  I GRNRLE+      A  FK    +  + M QNGI   GI   
Sbjct: 155 KEEARKRGQEVPDLETVICGRNRLESGSMASWAKAFKLNNKVREIRMVQNGIRQEGIEQL 214

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L D     K LR L+L DNT T  GA  L + L     L  L + D LLK+ G   +A  
Sbjct: 215 LRDGLSHAKELRVLDLQDNTFTVSGAKALAEVLPNWTELVELGVSDSLLKAKGGLLVADA 274

Query: 401 LTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-----LKQINVSENQFGEE 448
           L    N  LE + L  NEI+  G    VKA+ +  +     LK++ ++ NQF E+
Sbjct: 275 LAHGYNKKLEVLKLQYNEINSAG----VKALYDAVRGSLPALKRLELNGNQFSED 325



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 69/144 (47%), Gaps = 12/144 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  FK    +  + M QNGI   GI   L D     K+LR L+L DNT T  GA  L +
Sbjct: 186 WAKAFKLNNKVREIRMVQNGIRQEGIEQLLRDGLSHAKELRVLDLQDNTFTVSGAKALAE 245

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAM 118
            L     L  L + D LLK+ G   +A  L    N  LE + L  NEI+  G    VKA+
Sbjct: 246 VLPNWTELVELGVSDSLLKAKGGLLVADALAHGYNKKLEVLKLQYNEINSAG----VKAL 301

Query: 119 KNKTK-----LKQINVSENQFGEE 137
            +  +     LK++ ++ NQF E+
Sbjct: 302 YDAVRGSLPALKRLELNGNQFSED 325



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 21/220 (9%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE-NEGAKMLAA 315
           +EE++L  N LGI  CKLL + L     ++K+            GR   E  E  K L  
Sbjct: 36  VEEVRLLGNTLGIGACKLLGEVL-----ATKQTLRVANFADIFTGRLLSEIPEALKGLLT 90

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
               L  L  + +  N   +     L D   ++  L+HL LN+N +       +  AL +
Sbjct: 91  PIINLPKLNTINLNDNAFGYNLRNELVDFLSQHVPLQHLYLNNNGLGPHAGSAVADALVE 150

Query: 376 L--------------PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
           L              P L  +  G   L+S   +S AK    N  + ++ +  N I  +G
Sbjct: 151 LHAKKEEARKRGQEVPDLETVICGRNRLESGSMASWAKAFKLNNKVREIRMVQNGIRQEG 210

Query: 422 GLDLVK-AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
              L++  + +  +L+ +++ +N F   G + + +++ ++
Sbjct: 211 IEQLLRDGLSHAKELRVLDLQDNTFTVSGAKALAEVLPNW 250


>gi|295672363|ref|XP_002796728.1| ran GTPase-activating protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226283708|gb|EEH39274.1| ran GTPase-activating protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 497

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 132/264 (50%), Gaps = 24/264 (9%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DLSDNAFG    + + + LR+     L  L LNNNGLG    + ++ AL +  ES 
Sbjct: 157 LQSIDLSDNAFGVNTKDPIVEFLRAH--LPLRHLILNNNGLGPEAGRYIANALTELSESK 214

Query: 287 KKEGS--------PLALKVFIAGRNRLE----NEGAKMLAAVFKKLKTLERVEMPQNGIY 334
            K  S        P  L+  I GRNRLE    N  A  + A  K L+T   V M QNGIY
Sbjct: 215 LKARSNPEIKYEIP-PLETIICGRNRLEAGSMNAWAHAIKAHGKGLRT---VRMKQNGIY 270

Query: 335 HVGI-TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
             GI T LS       +L   +L DNT   +G+  L + +  LPSL  L + DC L   G
Sbjct: 271 SKGIVTLLSIGICHAPDLEVFDLEDNTYGKEGSSALAEVVLGLPSLRELGVDDCALTGKG 330

Query: 394 ASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLKQINVSENQFGEEG- 449
              +AK L+  +N  LE + L  NEI+ +G G  L  A K+   LK++ ++ N F E+  
Sbjct: 331 WLRVAKALSAGENKKLEILKLKGNEINGRGVGALLHVARKSLPSLKKVLLNANAFDEDND 390

Query: 450 -VEEMEKLMKSFGMAAALVLEDDE 472
            + ++ +L+K        + EDDE
Sbjct: 391 HIVKLVELLKRRRELLGKLDEDDE 414



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 10  KTLEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  V M QNGIY  GI T LS        L   +L DNT   +G+  L + +  LPSL
Sbjct: 257 KGLRTVRMKQNGIYSKGIVTLLSIGICHAPDLEVFDLEDNTYGKEGSSALAEVVLGLPSL 316

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLK 125
             L + DC L   G   +AK L+  +N  LE + L  NEI+ +G G  L  A K+   LK
Sbjct: 317 RELGVDDCALTGKGWLRVAKALSAGENKKLEILKLKGNEINGRGVGALLHVARKSLPSLK 376

Query: 126 QINVSENQFGEEG--VEEMEKLMKSFGMAAALVLEDDEG 162
           ++ ++ N F E+   + ++ +L+K        + EDDE 
Sbjct: 377 KVLLNANAFDEDNDHIVKLVELLKRRRELLGKLDEDDEA 415


>gi|225683281|gb|EEH21565.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 495

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 132/264 (50%), Gaps = 24/264 (9%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DLSDNAFG    + + + LR+     L  L LNNNGLG    + ++ AL +  ES 
Sbjct: 157 LQSIDLSDNAFGVNTKDPIVEFLRAH--LPLRHLILNNNGLGPEAGRYIANALTELSESK 214

Query: 287 KKEGS--------PLALKVFIAGRNRLE----NEGAKMLAAVFKKLKTLERVEMPQNGIY 334
            K  S        P  L+  I GRNRLE    N  A  + A  K L+T   V M QNGIY
Sbjct: 215 LKARSNPEIKYEIP-PLETIICGRNRLEAGSMNAWAHAIKAHGKGLRT---VRMKQNGIY 270

Query: 335 HVGI-TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
             GI T LS       +L   +L DNT   +G+  L + +  LPSL  L + DC L   G
Sbjct: 271 SKGIVTLLSIGICHAPDLEVFDLEDNTYGKEGSSALAEVVLGLPSLRELGVDDCALTGKG 330

Query: 394 ASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLKQINVSENQFGEEG- 449
              +AK L+  +N  LE + L  NEI+ +G G  L  A K+   LK++ ++ N F E+  
Sbjct: 331 WLRVAKALSAGENKKLEILKLKGNEINGRGVGALLHVARKSLPSLKKVLLNANAFDEDND 390

Query: 450 -VEEMEKLMKSFGMAAALVLEDDE 472
            + ++ +L+K        + EDDE
Sbjct: 391 HIVKLVELLKRRRELLGKLDEDDE 414



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 10  KTLEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  V M QNGIY  GI T LS        L   +L DNT   +G+  L + +  LPSL
Sbjct: 257 KGLRTVRMKQNGIYSKGIVTLLSIGICHAPDLEVFDLEDNTYGKEGSSALAEVVLGLPSL 316

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLK 125
             L + DC L   G   +AK L+  +N  LE + L  NEI+ +G G  L  A K+   LK
Sbjct: 317 RELGVDDCALTGKGWLRVAKALSAGENKKLEILKLKGNEINGRGVGALLHVARKSLPSLK 376

Query: 126 QINVSENQFGEEG--VEEMEKLMKSFGMAAALVLEDDEG 162
           ++ ++ N F E+   + ++ +L+K        + EDDE 
Sbjct: 377 KVLLNANAFDEDNDHIVKLVELLKRRRELLGKLDEDDEA 415


>gi|353235628|emb|CCA67638.1| probable ran GTPase activating protein 1 [Piriformospora indica DSM
           11827]
          Length = 424

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 31/230 (13%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY----- 283
           E+DLSDNA+GP     L   L  +  F +  LKL+NNGLG  G  ++++AL         
Sbjct: 99  EVDLSDNAYGPRCAPSLVPFLSQNTHFTI--LKLSNNGLGPEGSTIIAEALEANAKNARR 156

Query: 284 --------------------ESSKKEGSPLA--LKVFIAGRNRLENEGAKMLAAVFKKLK 321
                               +++ +   P    L+VF  GRNR++ E        F    
Sbjct: 157 AAARTAMGARMMGSVNPLDNQATMQNNEPFKSNLRVFHCGRNRMQMESMAAWGKTFAAHG 216

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            L+ V + QNGI+  G   L        +L++L+L DNTI  +G   + +AL   P L I
Sbjct: 217 GLQEVRLYQNGIFEAGFPPLIAGLSACPDLQYLDLADNTINKQGCAAIARALPCWPQLTI 276

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTT--LEDVNLTCNEISVQGGLDLVKAM 429
           LNL +  L +AGA++I   L   T+  L  + L  +EI  +  + L +A+
Sbjct: 277 LNLSESYLTNAGATAIFNVLKTGTSPKLTSLQLQFSEIGEKAMMVLAQAI 326



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ V + QNGI+  G   L         L++L+L DNTI  +G   + +AL   P L IL
Sbjct: 218 LQEVRLYQNGIFEAGFPPLIAGLSACPDLQYLDLADNTINKQGCAAIARALPCWPQLTIL 277

Query: 72  NLGDCLLKSAGASSIAKYLTDNTT--LEDVNLTCNEISVQGGLDLVKAM 118
           NL +  L +AGA++I   L   T+  L  + L  +EI  +  + L +A+
Sbjct: 278 NLSESYLTNAGATAIFNVLKTGTSPKLTSLQLQFSEIGEKAMMVLAQAI 326



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 22  IYHVG--------ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           ++H G        + A    F  +  L+ + L  N I   G  PL   LS  P L  L+L
Sbjct: 192 VFHCGRNRMQMESMAAWGKTFAAHGGLQEVRLYQNGIFEAGFPPLIAGLSACPDLQYLDL 251

Query: 74  GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 133
            D  +   G ++IA+ L     L  +NL+ + ++  G   +   +K  T  K  ++ + Q
Sbjct: 252 ADNTINKQGCAAIARALPCWPQLTILNLSESYLTNAGATAIFNVLKTGTSPKLTSL-QLQ 310

Query: 134 FGEEGVEEMEKLMKSF 149
           F E G + M  L ++ 
Sbjct: 311 FSEIGEKAMMVLAQAI 326


>gi|327349515|gb|EGE78372.1| ran GTPase activating protein 1 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 490

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 122/256 (47%), Gaps = 17/256 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG    E L + LR+     L  L LNNNGLG      ++ AL +  E   K 
Sbjct: 152 IDLSDNAFGVNTKEPLVEFLRAH--LPLRHLILNNNGLGPEAGTFIANALTELSEGKLKA 209

Query: 290 GS--------PLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITA 340
            S        P AL+  I GRNRLE    +      K   K L  + M QNGIY  G+  
Sbjct: 210 RSNPEIKYEVP-ALETIICGRNRLEAGSMEAWGRAIKANGKGLRTIRMKQNGIYSKGVVK 268

Query: 341 L-SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L +        L   +L DNT    G++ L   L+ LPSL  L + DC L + G   +AK
Sbjct: 269 LLNTGICHAPELEVFDLEDNTYGKDGSVALAAVLAGLPSLRELGVDDCALTAKGWLRVAK 328

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKL 456
            L+   N  +E + L  NEI+ +G   L+   K     LK++ ++ N F E+  E +E+L
Sbjct: 329 ALSAGGNKRIEVLKLKGNEINGKGVRALIHVAKTSLPALKKVLLNANAFDEDN-ENIERL 387

Query: 457 MKSFGMAAALVLEDDE 472
           ++       L  +DDE
Sbjct: 388 VELLRRRKELFGKDDE 403



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 5/156 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGIY  G+  L +       +L   +L DNT    G++ L   L+ LPSL
Sbjct: 249 KGLRTIRMKQNGIYSKGVVKLLNTGICHAPELEVFDLEDNTYGKDGSVALAAVLAGLPSL 308

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L + DC L + G   +AK L+   N  +E + L  NEI+ +G   L+   K     LK
Sbjct: 309 RELGVDDCALTAKGWLRVAKALSAGGNKRIEVLKLKGNEINGKGVRALIHVAKTSLPALK 368

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           ++ ++ N F E+  E +E+L++       L  +DDE
Sbjct: 369 KVLLNANAFDEDN-ENIERLVELLRRRKELFGKDDE 403


>gi|239608315|gb|EEQ85302.1| ran GTPase activating protein 1 [Ajellomyces dermatitidis ER-3]
          Length = 489

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 122/256 (47%), Gaps = 17/256 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG    E L + LR+     L  L LNNNGLG      ++ AL +  E   K 
Sbjct: 152 IDLSDNAFGVNTKEPLVEFLRAH--LPLRHLILNNNGLGPEAGTFIANALTELSEGKLKA 209

Query: 290 GS--------PLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITA 340
            S        P AL+  I GRNRLE    +      K   K L  + M QNGIY  G+  
Sbjct: 210 RSNPEIKYEVP-ALETIICGRNRLEAGSMEAWGRAIKANGKGLRTIRMKQNGIYSKGVVK 268

Query: 341 L-SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L +        L   +L DNT    G++ L   L+ LPSL  L + DC L + G   +AK
Sbjct: 269 LLNTGICHAPELEVFDLEDNTYGKDGSVALAAVLAGLPSLRELGVDDCALTAKGWLRVAK 328

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKL 456
            L+   N  +E + L  NEI+ +G   L+   K     LK++ ++ N F E+  E +E+L
Sbjct: 329 ALSAGGNKRIEVLKLKGNEINGKGVRALIHVAKTSLPALKKVLLNANAFDEDN-ENIERL 387

Query: 457 MKSFGMAAALVLEDDE 472
           ++       L  +DDE
Sbjct: 388 VELLRRRKELFGKDDE 403



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 5/156 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGIY  G+  L +       +L   +L DNT    G++ L   L+ LPSL
Sbjct: 249 KGLRTIRMKQNGIYSKGVVKLLNTGICHAPELEVFDLEDNTYGKDGSVALAAVLAGLPSL 308

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L + DC L + G   +AK L+   N  +E + L  NEI+ +G   L+   K     LK
Sbjct: 309 RELGVDDCALTAKGWLRVAKALSAGGNKRIEVLKLKGNEINGKGVRALIHVAKTSLPALK 368

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           ++ ++ N F E+  E +E+L++       L  +DDE
Sbjct: 369 KVLLNANAFDEDN-ENIERLVELLRRRKELFGKDDE 403


>gi|261203293|ref|XP_002628860.1| ran GTPase activating protein 1 [Ajellomyces dermatitidis SLH14081]
 gi|239586645|gb|EEQ69288.1| ran GTPase activating protein 1 [Ajellomyces dermatitidis SLH14081]
          Length = 490

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 122/256 (47%), Gaps = 17/256 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG    E L + LR+     L  L LNNNGLG      ++ AL +  E   K 
Sbjct: 152 IDLSDNAFGVNTKEPLVEFLRAH--LPLRHLILNNNGLGPEAGTFIANALTELSEGKLKA 209

Query: 290 GS--------PLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITA 340
            S        P AL+  I GRNRLE    +      K   K L  + M QNGIY  G+  
Sbjct: 210 RSNPEIKYEVP-ALETIICGRNRLEAGSMEAWGRAIKANGKGLRTIRMKQNGIYSKGVVK 268

Query: 341 L-SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L +        L   +L DNT    G++ L   L+ LPSL  L + DC L + G   +AK
Sbjct: 269 LLNTGICHAPELEVFDLEDNTYGKDGSVALAAVLAGLPSLRELGVDDCALTAKGWLRVAK 328

Query: 400 YLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKL 456
            L+   N  +E + L  NEI+ +G   L+   K     LK++ ++ N F E+  E +E+L
Sbjct: 329 ALSAGGNKRIEVLKLKGNEINGKGVRALIHVAKTSLPALKKVLLNANAFDEDN-ENIERL 387

Query: 457 MKSFGMAAALVLEDDE 472
           ++       L  +DDE
Sbjct: 388 VELLRRRKELFGKDDE 403



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 5/156 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGIY  G+  L +       +L   +L DNT    G++ L   L+ LPSL
Sbjct: 249 KGLRTIRMKQNGIYSKGVVKLLNTGICHAPELEVFDLEDNTYGKDGSVALAAVLAGLPSL 308

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L + DC L + G   +AK L+   N  +E + L  NEI+ +G   L+   K     LK
Sbjct: 309 RELGVDDCALTAKGWLRVAKALSAGGNKRIEVLKLKGNEINGKGVRALIHVAKTSLPALK 368

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           ++ ++ N F E+  E +E+L++       L  +DDE
Sbjct: 369 KVLLNANAFDEDN-ENIERLVELLRRRKELFGKDDE 403


>gi|226288240|gb|EEH43752.1| ran GTPase-activating protein [Paracoccidioides brasiliensis Pb18]
          Length = 495

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 132/264 (50%), Gaps = 24/264 (9%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DLSDNAFG    + + + LR+     L  L LNNNGLG    + ++ AL +  ES 
Sbjct: 157 LQSIDLSDNAFGVNTKDPIVEFLRAH--LPLRHLILNNNGLGPEAGRYIANALTELSESK 214

Query: 287 KKEGS--------PLALKVFIAGRNRLE----NEGAKMLAAVFKKLKTLERVEMPQNGIY 334
            K  S        P  L+  I GRNRLE    N  A  + A  K L+T   V M QNGIY
Sbjct: 215 LKARSNPEIKYEIP-PLETIICGRNRLEAGSMNAWAHAIKAHGKGLRT---VRMKQNGIY 270

Query: 335 HVGI-TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
             GI T LS       +L   +L DNT   +G+  L + +  LPSL  L + DC L   G
Sbjct: 271 SKGIVTLLSIGICHAPDLEVFDLEDNTYGKEGSSALAEVVLGLPSLRELGVDDCALTGKG 330

Query: 394 ASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLKQINVSENQFGEEG- 449
              +AK L+  +N  LE + L  NEI+ +G G  L  A K+   LK++ ++ N F E+  
Sbjct: 331 WLRVAKALSAGENKKLEILKLKGNEINGRGVGALLHVARKSLPSLKKVLLNANAFDEDND 390

Query: 450 -VEEMEKLMKSFGMAAALVLEDDE 472
            + ++ +L+K        + EDDE
Sbjct: 391 HIVKLVELLKRRRELLGKLDEDDE 414



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 10  KTLEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  V M QNGIY  GI T LS        L   +L DNT   +G+  L + +  LPSL
Sbjct: 257 KGLRTVRMKQNGIYSKGIVTLLSIGICHAPDLEVFDLEDNTYGKEGSSALAEVVLGLPSL 316

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLK 125
             L + DC L   G   +AK L+  +N  LE + L  NEI+ +G G  L  A K+   LK
Sbjct: 317 RELGVDDCALTGKGWLRVAKALSAGENKKLEILKLKGNEINGRGVGALLHVARKSLPSLK 376

Query: 126 QINVSENQFGEEG--VEEMEKLMKSFGMAAALVLEDDEG 162
           ++ ++ N F E+   + ++ +L+K        + EDDE 
Sbjct: 377 KVLLNANAFDEDNDHIVKLVELLKRRRELLGKLDEDDEA 415


>gi|330924481|ref|XP_003300656.1| hypothetical protein PTT_11964 [Pyrenophora teres f. teres 0-1]
 gi|311325097|gb|EFQ91245.1| hypothetical protein PTT_11964 [Pyrenophora teres f. teres 0-1]
          Length = 428

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 117/227 (51%), Gaps = 10/227 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           +DLSDNAFG   V  L D L  S    L  L LNNNGLG     L++ AL       E++
Sbjct: 100 VDLSDNAFGLNTVAPLVDFL--SQHTPLRYLYLNNNGLGPAAGVLVADALTALAAKKEAA 157

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDA 344
           +KEG  +  L++ I GRNRLEN      A  +   K ++ ++M QNGI   GI+ L ++ 
Sbjct: 158 RKEGKDVPDLELVICGRNRLENGSMAAWAKAYAANKGVKTIKMTQNGIRQEGISHLITNG 217

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
                 L  L+L DNT T  GA  L +A+     L  L +GDCLL   G  ++A  L   
Sbjct: 218 LAHLTQLDTLDLQDNTFTAMGANALSKAVGNWTELRELGVGDCLLSGRGGIALAAALEKG 277

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEE 448
           +N  +E + L  N+I+ +G   L  A       L+++ ++ N+F EE
Sbjct: 278 NNKKVEVLRLQFNDINAKGLAGLASASSTALPLLRRVEINGNKFDEE 324



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 4/132 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K ++ ++M QNGI   GI+ L ++      +L  L+L DNT T  GA  L +A+     L
Sbjct: 193 KGVKTIKMTQNGIRQEGISHLITNGLAHLTQLDTLDLQDNTFTAMGANALSKAVGNWTEL 252

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
             L +GDCLL   G  ++A  L   +N  +E + L  N+I+ +G   L  A       L+
Sbjct: 253 RELGVGDCLLSGRGGIALAAALEKGNNKKVEVLRLQFNDINAKGLAGLASASSTALPLLR 312

Query: 126 QINVSENQFGEE 137
           ++ ++ N+F EE
Sbjct: 313 RVEINGNKFDEE 324


>gi|296412089|ref|XP_002835760.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629550|emb|CAZ79917.1| unnamed protein product [Tuber melanosporum]
          Length = 399

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 124/241 (51%), Gaps = 12/241 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG    + L D    +    L  L LNNNGLG  G  +++ ++          
Sbjct: 102 VDLSDNAFGGRLADTLGDFYARAG--PLRHLLLNNNGLGPAGGIIVANSIRQLAVLKAST 159

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDAFEEN 348
            +   L+  + GRNRLEN      A  +   K+L  V+M QNGI   GI+AL  D   +N
Sbjct: 160 PAYPPLETIVCGRNRLENGSMAAWAEAYAAHKSLRTVKMVQNGIRQEGISALLRDGLSKN 219

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY--LTDNTT 406
             L+ L+L DNT T  GA  L   ++    L  L +GDCLL + G   + +   L  N  
Sbjct: 220 HGLQTLDLQDNTFTAAGAYALAAVVTNWSDLLELGVGDCLLSARGGVLLGEALGLGKNKA 279

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKT--KLKQINVSENQFGEEG--VEEMEKLM--KSF 460
           L+ + L  NEI V+ G++ +K   N +  KL+++ ++ N+F E+   VE+M ++   + F
Sbjct: 280 LKTIRLQYNEIDVK-GVEAIKRAINPSLPKLQRLELNGNKFSEDELVVEQMREIFGDRGF 338

Query: 461 G 461
           G
Sbjct: 339 G 339



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 10/150 (6%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K+L  V+M QNGI   GI+AL  D   +N  L+ L+L DNT T  GA  L   ++    L
Sbjct: 191 KSLRTVKMVQNGIRQEGISALLRDGLSKNHGLQTLDLQDNTFTAAGAYALAAVVTNWSDL 250

Query: 69  AILNLGDCLLKSAGASSIAKY--LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT--KL 124
             L +GDCLL + G   + +   L  N  L+ + L  NEI V+ G++ +K   N +  KL
Sbjct: 251 LELGVGDCLLSARGGVLLGEALGLGKNKALKTIRLQYNEIDVK-GVEAIKRAINPSLPKL 309

Query: 125 KQINVSENQFGEEG--VEEMEKLM--KSFG 150
           +++ ++ N+F E+   VE+M ++   + FG
Sbjct: 310 QRLELNGNKFSEDELVVEQMREIFGDRGFG 339


>gi|402219904|gb|EJT99976.1| RNI-like protein [Dacryopinax sp. DJM-731 SS1]
          Length = 640

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 109/209 (52%), Gaps = 14/209 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L +  +L E++LSDNAFG    E +  LL  +   ++  LKLNNNGLG  G +++++AL
Sbjct: 89  ALISHPQLHEINLSDNAFGGRSAEPMVRLLSQNTAISV--LKLNNNGLGPAGGEIVARAL 146

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
               E S        LKV + GRNRLE+  AK+ A  F K  TL  V M  +GI    + 
Sbjct: 147 LASAEKSAAASETSNLKVVVCGRNRLED-SAKVFAEAFAKHGTLREVTMQNDGIRMSAML 205

Query: 340 ALSDAFEENKNLRHLNLNDNT---ITYKGAIPL------GQALSKLPSLAILNLGDCLLK 390
           AL +      +L  L+L DNT   +T  GAI L       + L +  +L +LNL DC+LK
Sbjct: 206 ALVEGLSHCPDLELLDLADNTLTEVTDSGAIDLAGPRLVAKVLPRWKNLQVLNLSDCVLK 265

Query: 391 SAGASSIAKYLT--DNTTLEDVNLTCNEI 417
             G   IA+ L    N  L ++    +EI
Sbjct: 266 PRGGVLIAQSLAGGSNPGLRELKFENSEI 294



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 11/117 (9%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNT---ITYKGAIP 57
           + A  F K  TL  V M  +GI    + AL +       L  L+L DNT   +T  GAI 
Sbjct: 178 VFAEAFAKHGTLREVTMQNDGIRMSAMLALVEGLSHCPDLELLDLADNTLTEVTDSGAID 237

Query: 58  L------GQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEI 106
           L       + L +  +L +LNL DC+LK  G   IA+ L    N  L ++    +EI
Sbjct: 238 LAGPRLVAKVLPRWKNLQVLNLSDCVLKPRGGVLIAQSLAGGSNPGLRELKFENSEI 294


>gi|320591730|gb|EFX04169.1| ran GTPase activating protein 1 [Grosmannia clavigera kw1407]
          Length = 425

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 14/246 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 96  KLTTINLNDNAFGLNTQAPLVAFL--AAHVPLQHLYLNNNGLGPHAGILVADALSELHAK 153

Query: 283 YESSKKEGSPLA---LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            E+++K G+      L+  I GRNRLEN      A  F+    ++ ++M QNGI   GI+
Sbjct: 154 KEAARKAGTATEVPDLETVICGRNRLENGSMTAWARTFRLHNHVKEIKMVQNGIRQEGIS 213

Query: 340 -ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             LS+  ++   LR L+L DNT T  GA  L   + +  ++  L +GD LL + G   +A
Sbjct: 214 HLLSEGLQDATGLRVLDLQDNTFTLAGARALAGVVPRWTAIEELGVGDSLLSAKGGVLLA 273

Query: 399 KYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGE--EGVEEM 453
           + L    N  L+ + L  N+I+  G   L +A+     L Q + V+ N+F E  E V  +
Sbjct: 274 EALAQGQNKKLQVLRLQYNDITAPGLKALARAVDTALPLLQKLEVNGNKFSEDDEAVVVL 333

Query: 454 EKLMKS 459
           ++L ++
Sbjct: 334 QELFEA 339



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 8/168 (4%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           A  F+    ++ ++M QNGI   GI+  LS+  ++   LR L+L DNT T  GA  L   
Sbjct: 188 ARTFRLHNHVKEIKMVQNGIRQEGISHLLSEGLQDATGLRVLDLQDNTFTLAGARALAGV 247

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           + +  ++  L +GD LL + G   +A+ L    N  L+ + L  N+I+  G   L +A+ 
Sbjct: 248 VPRWTAIEELGVGDSLLSAKGGVLLAEALAQGQNKKLQVLRLQYNDITAPGLKALARAVD 307

Query: 120 NKTKLKQ-INVSENQFGE--EGVEEMEKLMKSF--GMAAALVLEDDEG 162
               L Q + V+ N+F E  E V  +++L ++    +A  +V ED  G
Sbjct: 308 TALPLLQKLEVNGNKFSEDDEAVVVLQELFEARKEALAGDVVDEDAWG 355


>gi|363748588|ref|XP_003644512.1| hypothetical protein Ecym_1469 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356888144|gb|AET37695.1| hypothetical protein Ecym_1469 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 408

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 106/193 (54%), Gaps = 8/193 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L+LSDNAFG   ++ L D + ++    L+ L L+NNG+G    + + +AL+   +  K  
Sbjct: 113 LNLSDNAFGLRTIDILEDYIANAV--NLKHLILSNNGMGPFAGERIGRALYSLAQRKKDA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITAL-SDAFEE 347
           G PL L+ FI GRNRLEN  AK LA   K     L+ V + QNGI   GI  L     + 
Sbjct: 171 GKPL-LETFICGRNRLENGSAKCLALGLKGHAGGLKTVRLYQNGIRPNGIAILIKHGLKY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDN-- 404
           N NL  L+L DNT T   ++ L + L +  S L  LN+ DCLLK  G  ++ K +  N  
Sbjct: 230 NVNLEVLDLQDNTFTSGASMVLAEVLPQWKSTLKELNVNDCLLKELGCDAVLKVMLSNQF 289

Query: 405 TTLEDVNLTCNEI 417
           ++L+ + L  NE+
Sbjct: 290 SSLKTLKLQYNEM 302



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 4/99 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LA 69
           L+ V + QNGI   GI  L     + N  L  L+L DNT T   ++ L + L +  S L 
Sbjct: 204 LKTVRLYQNGIRPNGIAILIKHGLKYNVNLEVLDLQDNTFTSGASMVLAEVLPQWKSTLK 263

Query: 70  ILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEI 106
            LN+ DCLLK  G  ++ K +  N  ++L+ + L  NE+
Sbjct: 264 ELNVNDCLLKELGCDAVLKVMLSNQFSSLKTLKLQYNEM 302


>gi|336267330|ref|XP_003348431.1| hypothetical protein SMAC_02927 [Sordaria macrospora k-hell]
 gi|380092085|emb|CCC10353.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 421

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 118/231 (51%), Gaps = 10/231 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 97  KLNTINLNDNAFGLNTQAPLVAFL--AAHVPLQHLYLNNNGLGPHAGILIADALSELHAK 154

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E ++K+G  +  L+  I GRNRLEN      A  F+    +++++M QNGI   GI+  
Sbjct: 155 KEEARKQGQDVPYLETVICGRNRLENGSMTAWAKTFRLHNKVKQIKMVQNGIRQEGISHL 214

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS+       L+ L+L DNT T KGA  L +       L  L +GD LL + G   +++ 
Sbjct: 215 LSEGLNHASELQVLDLQDNTFTLKGAKALAKVTPGWTELIELGIGDSLLSAKGGVLLSEA 274

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
           L    N  LE + L  NEI+  G   L +A K     LK+I ++ N+F E+
Sbjct: 275 LLKGKNKKLEILRLQYNEITAPGIKGLAQAAKEALPALKKIELNGNKFTED 325



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 8/168 (4%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           A  F+    ++ ++M QNGI   GI+  LS+      +L+ L+L DNT T KGA  L + 
Sbjct: 187 AKTFRLHNKVKQIKMVQNGIRQEGISHLLSEGLNHASELQVLDLQDNTFTLKGAKALAKV 246

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
                 L  L +GD LL + G   +++ L    N  LE + L  NEI+  G   L +A K
Sbjct: 247 TPGWTELIELGIGDSLLSAKGGVLLSEALLKGKNKKLEILRLQYNEITAPGIKGLAQAAK 306

Query: 120 NK-TKLKQINVSENQFGE--EGVEEMEKLM--KSFGMAAALVLEDDEG 162
                LK+I ++ N+F E  E +  +++L+  +   +   +V ED+ G
Sbjct: 307 EALPALKKIELNGNKFTEDDEAIIALQELLEERKEQLGGDVVAEDEWG 354


>gi|194219286|ref|XP_001499317.2| PREDICTED: protein NLRC3 [Equus caballus]
          Length = 1063

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 196/449 (43%), Gaps = 61/449 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 666  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 725

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA SIA+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 726  SLQSNTIRDDGARSIAEALGTNRTLSVLHLQKNTIGPVGTQRMADALKQNKSLKELMFSS 785

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K            ++G                     +N +L  N
Sbjct: 786  NSMGDGGAKALAEALKV-----------NQGL--------------------ENLDLQSN 814

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
              + +  A+      +NQ+                L+ L+L +N+  P   EG  DL  +
Sbjct: 815  SISDAGVAALMGALCTNQT----------------LLSLNLRENSISP---EGAQDLAHA 855

Query: 252  SCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
             C    L+ L L  N L   G + ++ A+ +            AL       N ++   A
Sbjct: 856  LCTNSTLKNLDLTANLLHDEGAQAIAVAVRENR----------ALTSLHLQWNFIQAGAA 905

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            K L    +  ++L  +++ +N I   G +A++ A + N  L  L L   +I   GA  LG
Sbjct: 906  KALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGAPGAQALG 965

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
            +AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+ 
Sbjct: 966  EALAVNRTLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALS 1025

Query: 431  NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                L+ IN+  N  GE G   + + +K+
Sbjct: 1026 GNHGLQHINLQGNHIGESGARMISEAIKT 1054



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 173/412 (41%), Gaps = 61/412 (14%)

Query: 39   KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            +++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA ++A  L  N TL  
Sbjct: 665  RIQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLAS 724

Query: 99   VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
            ++L  N I   G   + +A+     L  +++ +N  G  G +          MA AL   
Sbjct: 725  LSLQSNTIRDDGARSIAEALGTNRTLSVLHLQKNTIGPVGTQR---------MADAL--- 772

Query: 159  DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
                            ++N S  E   S+ S  D      A                   
Sbjct: 773  ----------------KQNKSLKELMFSSNSMGDGGAKALAE------------------ 798

Query: 219  MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC-FALEELKLNNNGLGITGCKLLSK 277
             +LK    L  LDL  N+    GV   A L+ + C    L  L L  N +   G + L+ 
Sbjct: 799  -ALKVNQGLENLDLQSNSISDAGV---AALMGALCTNQTLLSLNLRENSISPEGAQDLAH 854

Query: 278  ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
            AL  C  S+        LK      N L +EGA+ +A   ++ + L  + +  N I    
Sbjct: 855  AL--CTNST--------LKNLDLTANLLHDEGAQAIAVAVRENRALTSLHLQWNFIQAGA 904

Query: 338  ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
              AL  A + N++L  L+L +N I  +GA  +  AL    +L  L L    + + GA ++
Sbjct: 905  AKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGAPGAQAL 964

Query: 398  AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             + L  N TLE ++L  N I V G   L  A+K  + L+++N+ EN  G +G
Sbjct: 965  GEALAVNRTLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSLGMDG 1016



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 175/422 (41%), Gaps = 59/422 (13%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NTI   GA  + +AL    +L+
Sbjct: 692  RSLTTLDLRSNSIGPQGAKALADALKINRTLASLSLQSNTIRDDGARSIAEALGTNRTLS 751

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   G   +A  L  N +L+++  + N +   G   L +A+K    L+ +++
Sbjct: 752  VLHLQKNTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKVNQGLENLDL 811

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
              N   + GV     LM +               C+++     +  EN    EG   +L+
Sbjct: 812  QSNSISDAGV---AALMGAL--------------CTNQTLLSLNLRENSISPEGAQ-DLA 853

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
            H                             +L T + L  LDL+ N     G + +A  +
Sbjct: 854  H-----------------------------ALCTNSTLKNLDLTANLLHDEGAQAIAVAV 884

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            R +   AL  L L  N +     K L +AL        +  + L L+      N + +EG
Sbjct: 885  REN--RALTSLHLQWNFIQAGAAKALGQALQ-----LNRSLTSLDLQ-----ENAIGDEG 932

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            A  +A+  K    L  + +    I   G  AL +A   N+ L  L+L  NTI   GA  L
Sbjct: 933  ASAVASALKANTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIGVAGAKAL 992

Query: 370  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
              AL    SL  LNL +  L   GA  +A  L+ N  L+ +NL  N I   G   + +A+
Sbjct: 993  ANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHINLQGNHIGESGARMISEAI 1052

Query: 430  KN 431
            K 
Sbjct: 1053 KT 1054



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +   A   L L +N +   G + +++AL
Sbjct: 687 SLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLA--SLSLQSNTIRDDGARSIAEAL 744

Query: 280 H-----DCYESSKKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                       K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 745 GTNRTLSVLHLQKNTIGPVGTQRMADALKQNKSLKELMFSSNSMGDGGAKALAEALKVNQ 804

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            LE +++  N I   G+ AL  A   N+ L  LNL +N+I+ +GA  L  AL    +L  
Sbjct: 805 GLENLDLQSNSISDAGVAALMGALCTNQTLLSLNLRENSISPEGAQDLAHALCTNSTLKN 864

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL   GA +IA  + +N  L  ++L  N I       L +A++    L  +++ 
Sbjct: 865 LDLTANLLHDEGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQ 924

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G+EG   +   +K+     AL L+
Sbjct: 925 ENAIGDEGASAVASALKANTALTALYLQ 952



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 162/389 (41%), Gaps = 48/389 (12%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G  ++++A   N+ L  L+L  NTI   G   +  A
Sbjct: 712  LADALKINRTLASLSLQSNTIRDDGARSIAEALGTNRTLSVLHLQKNTIGPVGTQRMADA 771

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L +  SL  L      +   GA ++A+ L  N  LE+++L  N IS  G   L+ A+   
Sbjct: 772  LKQNKSLKELMFSSNSMGDGGAKALAEALKVNQGLENLDLQSNSISDAGVAALMGALCTN 831

Query: 122  TKLKQINVSENQFGEEGVEEME------KLMKSFGMAAALVLEDDEGECSDEEQDEESEE 175
              L  +N+ EN    EG +++         +K+  + A L+   DEG             
Sbjct: 832  QTLLSLNLRENSISPEGAQDLAHALCTNSTLKNLDLTANLL--HDEG------------A 877

Query: 176  ENDSDAEGDNSNLS--HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
            +  + A  +N  L+  H   N     + ++   + Q + +             L  LDL 
Sbjct: 878  QAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNRS-------------LTSLDLQ 924

Query: 234  DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            +NA G  G   +A  L+++   AL  L L    +G  G + L +AL              
Sbjct: 925  ENAIGDEGASAVASALKANT--ALTALYLQVASIGAPGAQALGEAL----------AVNR 972

Query: 294  ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
             L++     N +   GAK LA   K   +L R+ + +N +   G   ++ A   N  L+H
Sbjct: 973  TLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQH 1032

Query: 354  LNLNDNTITYKGAIPLGQAL-SKLPSLAI 381
            +NL  N I   GA  + +A+ +  PS  +
Sbjct: 1033 INLQGNHIGESGARMISEAIKTNAPSCTV 1061


>gi|189203861|ref|XP_001938266.1| ran GTPase activating protein 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187985365|gb|EDU50853.1| ran GTPase activating protein 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 427

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 10/227 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           +DLSDNAFG   V  L D L  S    L  L LNNNGLG     L++ AL       E++
Sbjct: 100 VDLSDNAFGLNTVAPLVDFL--SQHTPLRYLYLNNNGLGPAAGVLVADALTALAAKKEAA 157

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDA 344
           +K+G  +  L++ I GRNRLEN      A  +   K ++ ++M QNGI   GI+ L ++ 
Sbjct: 158 RKQGKDVPDLELVICGRNRLENGSMAAWAKAYAANKGVKTIKMTQNGIRQEGISHLITNG 217

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
                 L  L+L DNT T  GA  L +A+     L  L +GDCLL   G  ++A  L   
Sbjct: 218 LAHLTQLDTLDLQDNTFTAMGANALSKAVGNWTELRELGVGDCLLSGRGGIALAAALEKG 277

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEE 448
           +N  +E + L  N+I+ +G   L  A       L+++ ++ N+F EE
Sbjct: 278 NNKKVEVLRLQFNDINAKGLAGLASASSTALPLLRRVEINGNKFDEE 324



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 4/132 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K ++ ++M QNGI   GI+ L ++      +L  L+L DNT T  GA  L +A+     L
Sbjct: 193 KGVKTIKMTQNGIRQEGISHLITNGLAHLTQLDTLDLQDNTFTAMGANALSKAVGNWTEL 252

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
             L +GDCLL   G  ++A  L   +N  +E + L  N+I+ +G   L  A       L+
Sbjct: 253 RELGVGDCLLSGRGGIALAAALEKGNNKKVEVLRLQFNDINAKGLAGLASASSTALPLLR 312

Query: 126 QINVSENQFGEE 137
           ++ ++ N+F EE
Sbjct: 313 RVEINGNKFDEE 324


>gi|212536336|ref|XP_002148324.1| ran GTPase activating protein 1 (RNA1 protein) [Talaromyces
           marneffei ATCC 18224]
 gi|210070723|gb|EEA24813.1| ran GTPase activating protein 1 (RNA1 protein) [Talaromyces
           marneffei ATCC 18224]
          Length = 428

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 126/241 (52%), Gaps = 15/241 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           ++LSDNAFG      L D L  S    L  L LNNNGLG     L++ AL +     E +
Sbjct: 98  INLSDNAFGLNTQAPLVDYL--SRAVPLRHLILNNNGLGPKAGVLVADALTELAAQKEKA 155

Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITAL-S 342
           + EG   PL L+  + GRNRLEN   +  AA +K   K +  V+M QNGI   GI+ L  
Sbjct: 156 RSEGKDVPL-LESIVCGRNRLENGSMEAWAAAYKAHAKGMRSVKMTQNGIRQEGISLLLK 214

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           D       L  L+L DNT T  G+  L + +    SL  L +GDCLL + G   +A+ L 
Sbjct: 215 DGLSHASGLEVLDLQDNTFTLLGSSALAKVVQGWASLRELGVGDCLLSARGGIKVAQALA 274

Query: 403 --DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLM 457
              N  +E + L  N+I+ +G   L+ A KN    LK++ ++ N+F E+   +E++  L+
Sbjct: 275 AGKNEKVETLRLQFNDINAEGVKQLLFAAKNSLPALKRVELNGNKFMEDDSNIEDLRVLL 334

Query: 458 K 458
           +
Sbjct: 335 E 335



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 6/144 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K +  V+M QNGI   GI+ L  D       L  L+L DNT T  G+  L + +    SL
Sbjct: 192 KGMRSVKMTQNGIRQEGISLLLKDGLSHASGLEVLDLQDNTFTLLGSSALAKVVQGWASL 251

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L +GDCLL + G   +A+ L    N  +E + L  N+I+ +G   L+ A KN    LK
Sbjct: 252 RELGVGDCLLSARGGIKVAQALAAGKNEKVETLRLQFNDINAEGVKQLLFAAKNSLPALK 311

Query: 126 QINVSENQFGEE--GVEEMEKLMK 147
           ++ ++ N+F E+   +E++  L++
Sbjct: 312 RVELNGNKFMEDDSNIEDLRVLLE 335


>gi|408399491|gb|EKJ78592.1| hypothetical protein FPSE_01258 [Fusarium pseudograminearum CS3096]
          Length = 418

 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 129/258 (50%), Gaps = 14/258 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  S    L+ L LNNNG+G     L++ AL   H  
Sbjct: 96  KLTTVNLNDNAFGLNVQAPLVAFL--SAHVPLQHLYLNNNGMGPHAGILIADALSELHGK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E+++KEG  +  L+  I GRNRLEN      A  +     ++ V+M QNGI   G++  
Sbjct: 154 KEAARKEGKEIPDLETVICGRNRLENGSMTAWAKAYSLHNKIKTVKMVQNGIRQEGVSHL 213

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L++       L+ L+L DNT T  GA  L + +S   S+  L +GD LL   G   +A  
Sbjct: 214 LTEGLSHASELKVLDLQDNTFTVTGARALSKVVSNWASIQELGVGDSLLGPKGGILVANA 273

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGVEEMEK 455
           L    N+ LE + L  NEI  +G      A K+    LK+I ++ N   E  E +  +++
Sbjct: 274 LAKGKNSKLEILRLQYNEIPAKGIQAFATAAKDGLPALKRIEINGNILTEDDESIVALQE 333

Query: 456 LM--KSFGMAAALVLEDD 471
           L+  +   +A  +V ED+
Sbjct: 334 LLEERKENLAGDIVNEDE 351



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 11/163 (6%)

Query: 8   KLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+KT   V+M QNGI   G++  L++      +L+ L+L DNT T  GA  L + +S   
Sbjct: 194 KIKT---VKMVQNGIRQEGVSHLLTEGLSHASELKVLDLQDNTFTVTGARALSKVVSNWA 250

Query: 67  SLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TK 123
           S+  L +GD LL   G   +A  L    N+ LE + L  NEI  +G      A K+    
Sbjct: 251 SIQELGVGDSLLGPKGGILVANALAKGKNSKLEILRLQYNEIPAKGIQAFATAAKDGLPA 310

Query: 124 LKQINVSENQFGE--EGVEEMEKLM--KSFGMAAALVLEDDEG 162
           LK+I ++ N   E  E +  +++L+  +   +A  +V ED+ G
Sbjct: 311 LKRIEINGNILTEDDESIVALQELLEERKENLAGDIVNEDEWG 353


>gi|126335269|ref|XP_001370217.1| PREDICTED: protein NLRC3 [Monodelphis domestica]
          Length = 1093

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 133/281 (47%), Gaps = 21/281 (7%)

Query: 208 NQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNG 266
           NQ HN   +S   SL     L  LDL  N+ GP G + LAD L+ +    L  L L NN 
Sbjct: 704 NQIHNKGTKSLARSLLVNRSLTVLDLRSNSIGPQGAKALADSLKIN--RVLVSLSLQNNA 761

Query: 267 LGITGCKLLSKALH-----DCYESSKKEGSPL-------------ALKVFIAGRNRLENE 308
           +   G K ++ AL         +  K    PL             +LK  I   N + N+
Sbjct: 762 IKDDGAKFVADALMVNHKLSVLQLQKNTIGPLGAKSIADALKKNGSLKELIFSSNSVGND 821

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           G+K LA   K  ++L  +++  N I   G+TAL+ A   N+ L  LNL +N+I+ +GA  
Sbjct: 822 GSKALAEALKVNQSLITLDLQSNSISDAGVTALTHALRSNQTLLSLNLRENSISPEGARD 881

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           +  AL     L  L+L   LL+  GA +IA  + +N  L+ ++L  N I       L +A
Sbjct: 882 IASALCSNRVLQNLDLTANLLQDEGAQAIALAVKENRALKSLHLQWNFIQANAAKALGQA 941

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           +++   L  +++ EN  G+EG+  + + +K      AL L+
Sbjct: 942 LQSNRSLTILDLQENAIGDEGMMALSRALKINTSLTALYLQ 982



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 197/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I++ G  +L+ +   N+ L  L+L  N+I  +GA  L  +L     L  L
Sbjct: 696  IQKISLAENQIHNKGTKSLARSLLVNRSLTVLDLRSNSIGPQGAKALADSLKINRVLVSL 755

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L +  +K  GA  +A  L  N  L  + L  N I   G   +  A+K    LK++  S 
Sbjct: 756  SLQNNAIKDDGAKFVADALMVNHKLSVLQLQKNTIGPLGAKSIADALKKNGSLKELIFSS 815

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G +G + + + +K   +  +L+  D                +++S ++   + L+H 
Sbjct: 816  NSVGNDGSKALAEALK---VNQSLITLD---------------LQSNSISDAGVTALTH- 856

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
                                        +L++   L+ L+L +N+  P G   +A  L S
Sbjct: 857  ----------------------------ALRSNQTLLSLNLRENSISPEGARDIASALCS 888

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+        KE    ALK      N ++   AK
Sbjct: 889  N--RVLQNLDLTANLLQDEGAQAIALAV--------KENR--ALKSLHLQWNFIQANAAK 936

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G+ ALS A + N +L  L L   +I   GA  LG 
Sbjct: 937  ALGQALQSNRSLTILDLQENAIGDEGMMALSRALKINTSLTALYLQVASIGVLGAQALGD 996

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    + + GA ++A  L  N +L+ +NL  N + + G + +  A+  
Sbjct: 997  ALAVNRTLEILDLRGNSIGADGAKAMANALKINPSLQMLNLQENSLGMDGAICIATALSG 1056

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
               L+ +N+  N  GE G   + + +K+
Sbjct: 1057 NHGLQHVNLQGNHIGESGARMISEAIKT 1084



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 168/379 (44%), Gaps = 33/379 (8%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+D+ + N+ L  L+L +N I   GA  +  AL     L+
Sbjct: 722  RSLTVLDLRSNSIGPQGAKALADSLKINRVLVSLSLQNNAIKDDGAKFVADALMVNHKLS 781

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L L    +   GA SIA  L  N +L+++  + N +   G   L +A+K    L  +++
Sbjct: 782  VLQLQKNTIGPLGAKSIADALKKNGSLKELIFSSNSVGNDGSKALAEALKVNQSLITLDL 841

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDD----EGE-------CSD---EEQDEESEE 175
              N   + GV  +   ++S     +L L ++    EG        CS+   +  D  +  
Sbjct: 842  QSNSISDAGVTALTHALRSNQTLLSLNLRENSISPEGARDIASALCSNRVLQNLDLTANL 901

Query: 176  ENDSDAEGDNSNLSHNDSNHS-HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSD 234
              D  A+     +  N +  S H   N    N+ ++   + QS+ SL        LDL +
Sbjct: 902  LQDEGAQAIALAVKENRALKSLHLQWNFIQANAAKALGQALQSNRSLTI------LDLQE 955

Query: 235  NAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLA 294
            NA G  G+  L+  L+ +   +L  L L    +G+ G    ++AL D    ++       
Sbjct: 956  NAIGDEGMMALSRALKINT--SLTALYLQVASIGVLG----AQALGDALAVNR------T 1003

Query: 295  LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
            L++     N +  +GAK +A   K   +L+ + + +N +   G   ++ A   N  L+H+
Sbjct: 1004 LEILDLRGNSIGADGAKAMANALKINPSLQMLNLQENSLGMDGAICIATALSGNHGLQHV 1063

Query: 355  NLNDNTITYKGAIPLGQAL 373
            NL  N I   GA  + +A+
Sbjct: 1064 NLQGNHIGESGARMISEAI 1082



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 82/157 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  ++L  +++  N I   G+TAL+ A   N+ L  LNL +N+I+ +GA  +  A
Sbjct: 826 LAEALKVNQSLITLDLQSNSISDAGVTALTHALRSNQTLLSLNLRENSISPEGARDIASA 885

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L   LL+  GA +IA  + +N  L+ ++L  N I       L +A+++ 
Sbjct: 886 LCSNRVLQNLDLTANLLQDEGAQAIALAVKENRALKSLHLQWNFIQANAAKALGQALQSN 945

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G+EG+  + + +K      AL L+
Sbjct: 946 RSLTILDLQENAIGDEGMMALSRALKINTSLTALYLQ 982



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 72/139 (51%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G+ ALS A + N  L  L L   +I   GA  LG AL+   +L 
Sbjct: 946  RSLTILDLQENAIGDEGMMALSRALKINTSLTALYLQVASIGVLGAQALGDALAVNRTLE 1005

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    + + GA ++A  L  N +L+ +NL  N + + G + +  A+     L+ +N+
Sbjct: 1006 ILDLRGNSIGADGAKAMANALKINPSLQMLNLQENSLGMDGAICIATALSGNHGLQHVNL 1065

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  GE G   + + +K+
Sbjct: 1066 QGNHIGESGARMISEAIKT 1084



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 65/137 (47%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   K+ + L+ + +  N I      AL  A + N+ L  L+L +N I  +G + L +A
Sbjct: 910  IALAVKENRALKSLHLQWNFIQANAAKALGQALQSNRSLTILDLQENAIGDEGMMALSRA 969

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    SL  L L    +   GA ++   L  N TLE ++L  N I   G   +  A+K  
Sbjct: 970  LKINTSLTALYLQVASIGVLGAQALGDALAVNRTLEILDLRGNSIGADGAKAMANALKIN 1029

Query: 122  TKLKQINVSENQFGEEG 138
              L+ +N+ EN  G +G
Sbjct: 1030 PSLQMLNLQENSLGMDG 1046



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   KK  +L+ +    N + + G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 798 IADALKKNGSLKELIFSSNSVGNDGSKALAEALKVNQSLITLDLQSNSISDAGVTALTHA 857

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL +  +   GA  IA  L  N  L++++LT N +  +G   +  A+K  
Sbjct: 858 LRSNQTLLSLNLRENSISPEGARDIASALCSNRVLQNLDLTANLLQDEGAQAIALAVKEN 917

Query: 122 TKLKQINVSEN 132
             LK +++  N
Sbjct: 918 RALKSLHLQWN 928


>gi|45199043|ref|NP_986072.1| AFR525Cp [Ashbya gossypii ATCC 10895]
 gi|44985118|gb|AAS53896.1| AFR525Cp [Ashbya gossypii ATCC 10895]
 gi|374109303|gb|AEY98209.1| FAFR525Cp [Ashbya gossypii FDAG1]
          Length = 397

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 126/244 (51%), Gaps = 14/244 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           RL  ++LSDNAFG   +E L   +  +    L EL L NNG+G    + + +AL+     
Sbjct: 102 RLAVVNLSDNAFGLRTIEALEQYIAHAV--GLRELLLANNGMGPFAGERIGRALYALAVR 159

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGI-TALSD 343
            ++ G P  L+VF+ GRNRLEN  A+ LA   K   + L  V + QNGI   GI T +  
Sbjct: 160 KREAGRP-PLEVFVCGRNRLENGSARCLALGLKSHGEGLRTVRLYQNGIRPSGIATLIRH 218

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
               N+ L  L+L DNT+T   +  L  AL     +L  LN+ DCLLK+ G  S+ + L 
Sbjct: 219 GLRHNRKLEVLDLQDNTLTQGASEVLADALPVWKDTLRELNVNDCLLKAGGCESVLRALG 278

Query: 403 DN--TTLEDVNLTCNEISVQGGLD--LVKAM--KNKTKLKQINVSENQFGEEGVEEMEKL 456
            +    L+ + L  NE+  Q  L+  L+ A+  +N   L+ + ++ N+  EE  E ++ L
Sbjct: 279 AHKFAVLDTLKLQYNEME-QAALENILLPALEGENLGALQSLELNGNRL-EEDSEALQTL 336

Query: 457 MKSF 460
              F
Sbjct: 337 QDVF 340



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 10/146 (6%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L  V + QNGI   GI T +      N+KL  L+L DNT+T   +  L  AL     +L 
Sbjct: 197 LRTVRLYQNGIRPSGIATLIRHGLRHNRKLEVLDLQDNTLTQGASEVLADALPVWKDTLR 256

Query: 70  ILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEISVQGGLD--LVKAM--KNKTK 123
            LN+ DCLLK+ G  S+ + L  +    L+ + L  NE+  Q  L+  L+ A+  +N   
Sbjct: 257 ELNVNDCLLKAGGCESVLRALGAHKFAVLDTLKLQYNEME-QAALENILLPALEGENLGA 315

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSF 149
           L+ + ++ N+  EE  E ++ L   F
Sbjct: 316 LQSLELNGNRL-EEDSEALQTLQDVF 340


>gi|389633005|ref|XP_003714155.1| ran GTPase-activating protein 1 [Magnaporthe oryzae 70-15]
 gi|351646488|gb|EHA54348.1| ran GTPase-activating protein 1 [Magnaporthe oryzae 70-15]
 gi|440473663|gb|ELQ42445.1| ran GTPase-activating protein 1 [Magnaporthe oryzae Y34]
 gi|440486291|gb|ELQ66172.1| ran GTPase-activating protein 1 [Magnaporthe oryzae P131]
          Length = 421

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 122/244 (50%), Gaps = 13/244 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY--- 283
           L  ++L+DNAFG    + +AD L S     L+ L LNNNGLG      ++ AL + Y   
Sbjct: 98  LTTVNLNDNAFGINTYKPVADFLSSHV--PLQHLYLNNNGLGPEAGMYIADALSELYDKK 155

Query: 284 ESSKKEGSPLA--LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
           E ++KEG      L+  I GRNRLEN   K  A  F K   L+ V+M QNGI   GIT  
Sbjct: 156 EQARKEGRTDVPDLETVICGRNRLENGSMKAWAKAFSKHDKLKEVKMVQNGIRQEGITHL 215

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L++       ++ L+L DNT T  GA  L +       L  L + D  L + G   +++ 
Sbjct: 216 LTEGLSNTLAIQVLDLQDNTFTITGATALAKIAPTWTDLRELGVSDSYLGAKGGRLLSRA 275

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVE--EMEK 455
           L    N  LE + +  N+++ +        +K+    LK+I ++ N+  E+ V    ++K
Sbjct: 276 LAKGKNEKLETLRMQYNDMNARTLKSFADTVKDGLPALKKIEINGNKLSEDDVSIAALQK 335

Query: 456 LMKS 459
           L+++
Sbjct: 336 LLEA 339



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 6/153 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F K   L+ V+M QNGI   GIT  L++       ++ L+L DNT T  GA  L +
Sbjct: 187 WAKAFSKHDKLKEVKMVQNGIRQEGITHLLTEGLSNTLAIQVLDLQDNTFTITGATALAK 246

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM 118
                  L  L + D  L + G   +++ L    N  LE + +  N+++ +        +
Sbjct: 247 IAPTWTDLRELGVSDSYLGAKGGRLLSRALAKGKNEKLETLRMQYNDMNARTLKSFADTV 306

Query: 119 KNK-TKLKQINVSENQFGEEGVE--EMEKLMKS 148
           K+    LK+I ++ N+  E+ V    ++KL+++
Sbjct: 307 KDGLPALKKIEINGNKLSEDDVSIAALQKLLEA 339



 Score = 38.5 bits (88), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 26/223 (11%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +EE+++  N LGI  CK L + L     S+K       L     G  RL NE  + L  +
Sbjct: 36  VEEVRILGNTLGIGACKRLGEVL-----STKNNLQVANLADIFTG--RLLNEIPEALTHL 88

Query: 317 FKK---LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
             +   L  L  V +  N         ++D    +  L+HL LN+N +  +  + +  AL
Sbjct: 89  LTQITNLPNLTTVNLNDNAFGINTYKPVADFLSSHVPLQHLYLNNNGLGPEAGMYIADAL 148

Query: 374 SKL---------------PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           S+L               P L  +  G   L++    + AK  + +  L++V +  N I 
Sbjct: 149 SELYDKKEQARKEGRTDVPDLETVICGRNRLENGSMKAWAKAFSKHDKLKEVKMVQNGIR 208

Query: 419 VQGGLDLV-KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
            +G   L+ + + N   ++ +++ +N F   G   + K+  ++
Sbjct: 209 QEGITHLLTEGLSNTLAIQVLDLQDNTFTITGATALAKIAPTW 251


>gi|452848409|gb|EME50341.1| hypothetical protein DOTSEDRAFT_77372 [Dothistroma septosporum
           NZE10]
          Length = 563

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 118/241 (48%), Gaps = 14/241 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE---SS 286
           ++L+DNAFG   VE L   L       L+ L LNNNGLG     L+++AL    E   ++
Sbjct: 238 INLNDNAFGLNTVEPLRPFLSKHT--PLQHLYLNNNGLGPAAGALVAEALEKLAENKATA 295

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI-TALSDA 344
           +KEG  +  L+  I GRNRLE          +     ++ V+M QNGI   GI T L   
Sbjct: 296 RKEGKNVPDLETVICGRNRLETGSMAAWVKAYTANNKVKTVKMVQNGIRQEGIATLLQHG 355

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD- 403
               K L  L+L DNT T   A  L   +     L  L +GDCLL + G   + + L   
Sbjct: 356 LSNCKQLDTLDLQDNTFTALAAKSLASVVPSWTELWDLGVGDCLLSARGGRLLGRALATG 415

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKT---KLKQINVSENQFGEE--GVEEMEKLM 457
            N  LE + L  NEI  +G   +  A  + T   +L+++ ++ N+F EE   +E + +L+
Sbjct: 416 GNKKLEILRLQYNEIDAKGLKAISDAASHGTALPRLRRVELNGNKFSEEDASIETLRELL 475

Query: 458 K 458
           +
Sbjct: 476 E 476



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 11/148 (7%)

Query: 8   KLKTLEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+KT   V+M QNGI   GI T L       K+L  L+L DNT T   A  L   +    
Sbjct: 332 KVKT---VKMVQNGIRQEGIATLLQHGLSNCKQLDTLDLQDNTFTALAAKSLASVVPSWT 388

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKT-- 122
            L  L +GDCLL + G   + + L    N  LE + L  NEI  +G   +  A  + T  
Sbjct: 389 ELWDLGVGDCLLSARGGRLLGRALATGGNKKLEILRLQYNEIDAKGLKAISDAASHGTAL 448

Query: 123 -KLKQINVSENQFGEE--GVEEMEKLMK 147
            +L+++ ++ N+F EE   +E + +L++
Sbjct: 449 PRLRRVELNGNKFSEEDASIETLRELLE 476


>gi|240278916|gb|EER42422.1| ran GTPase activating protein [Ajellomyces capsulatus H143]
          Length = 470

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 114/236 (48%), Gaps = 19/236 (8%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG    + L + LR+     L  L LNNNGLG    +              K 
Sbjct: 152 VDLSDNAFGVNTKDPLVEFLRAH--LPLRHLILNNNGLGPEAAR---------SNPGIKY 200

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITAL-SDAFEE 347
             P AL+  + GRNRLE    +  A   K   K L  + M QNGIY  G+  L +     
Sbjct: 201 EIP-ALETIVCGRNRLEAGSMEAWARAIKANGKGLRTIRMKQNGIYSKGVVKLLNTGIYH 259

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNT 405
              L   +L DNT    G++ L   LS LPSL  L + DC L + G   +AK L+   NT
Sbjct: 260 APELEVFDLEDNTYGKDGSVALAAVLSGLPSLRELGVDDCALTAKGWLRVAKALSAGGNT 319

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGVEEMEKLMK 458
            LE + L  NEI+ +G   LV A K     LK++ ++ N F E  E +  +++L+K
Sbjct: 320 KLEILKLKGNEINGKGVRALVHAAKTSLPALKKVFLNANAFDEDNENIMRLQELLK 375



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGIY  G+  L +       +L   +L DNT    G++ L   LS LPSL
Sbjct: 232 KGLRTIRMKQNGIYSKGVVKLLNTGIYHAPELEVFDLEDNTYGKDGSVALAAVLSGLPSL 291

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L + DC L + G   +AK L+   NT LE + L  NEI+ +G   LV A K     LK
Sbjct: 292 RELGVDDCALTAKGWLRVAKALSAGGNTKLEILKLKGNEINGKGVRALVHAAKTSLPALK 351

Query: 126 QINVSENQFGE--EGVEEMEKLMK 147
           ++ ++ N F E  E +  +++L+K
Sbjct: 352 KVFLNANAFDEDNENIMRLQELLK 375


>gi|348502188|ref|XP_003438651.1| PREDICTED: protein NLRC3 [Oreochromis niloticus]
          Length = 1130

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 198/448 (44%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + +  N I + G  ALS A   N+ L  LNL +N I  KGA  L +AL     L  +
Sbjct: 733  IQKISLADNAISNKGAKALSRALLVNRTLTSLNLRNNNIGSKGAKFLAEALKMNQVLTSI 792

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            N  +  ++  GA S+A+ L  N  L  +NL  N I+  G   + +A+K    L ++ +  
Sbjct: 793  NFQNNAIEEEGAQSLAEVLQCNRKLVSLNLRKNTIAAGGAKRIAEALKTNRTLTKLILCG 852

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            NQ G++G         +  +A AL +                                  
Sbjct: 853  NQLGDKG---------TVALAEALAV---------------------------------- 869

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
              NH+  + +   N+ +    T+    + L  G  LV L+L +N+ G  G + +A  L  
Sbjct: 870  --NHTLLSLHLQSNSISNKGMTALTKALRLNHG--LVSLNLRENSIGVEGAKNMAHALHE 925

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L++L L  N L   G + ++ A+        +  + L L+      N +++   K
Sbjct: 926  NN--TLQDLDLTANLLHDDGIQAIAGAI-----KFNRGLTSLHLQ-----WNFIKSTATK 973

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             LA       T++ +++ +N I + G+T L++A + N +LR L L   +    GAI + +
Sbjct: 974  ALAHALLSNSTMQLLDLQENAIGNEGVTFLAEALKTNASLRTLCLQGVSAGTSGAIKMAE 1033

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL    +L  L+L    +   GA ++A  L  N +L+ +NL  N + + G + +  A+K 
Sbjct: 1034 ALMTNQTLQTLDLRGNTVGMEGAKALANALKSNRSLKSLNLQENSLGMDGAIFIATALKG 1093

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L  IN+  N  GE G + +   +++
Sbjct: 1094 NHQLTYINLQGNGIGESGAKVISDAIRA 1121



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 163/399 (40%), Gaps = 61/399 (15%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
             LA   K  + L  +    N I   G  +L++  + N+KL  LNL  NTI   GA  + +
Sbjct: 778  FLAEALKMNQVLTSINFQNNAIEEEGAQSLAEVLQCNRKLVSLNLRKNTIAAGGAKRIAE 837

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            AL    +L  L L    L   G  ++A+ L  N TL  ++L  N IS +G   L KA++ 
Sbjct: 838  ALKTNRTLTKLILCGNQLGDKGTVALAEALAVNHTLLSLHLQSNSISNKGMTALTKALRL 897

Query: 121  KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
               L  +N+ EN  G EG +          MA AL                    EN++ 
Sbjct: 898  NHGLVSLNLRENSIGVEGAKN---------MAHAL-------------------HENNTL 929

Query: 181  AEGD-NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
             + D  +NL H+D   +                       ++K    L  L L  N    
Sbjct: 930  QDLDLTANLLHDDGIQAIAG--------------------AIKFNRGLTSLHLQWNFIKS 969

Query: 240  IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
               + LA  L S+    L  L L  N +G  G   L++AL      +      L L+   
Sbjct: 970  TATKALAHALLSNSTMQL--LDLQENAIGNEGVTFLAEAL-----KTNASLRTLCLQGVS 1022

Query: 300  AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
            AG       GA  +A      +TL+ +++  N +   G  AL++A + N++L+ LNL +N
Sbjct: 1023 AG-----TSGAIKMAEALMTNQTLQTLDLRGNTVGMEGAKALANALKSNRSLKSLNLQEN 1077

Query: 360  TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            ++   GAI +  AL     L  +NL    +  +GA  I+
Sbjct: 1078 SLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVIS 1116



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 11/224 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L L +N F    +E L  LL +  C  ++++ L +N +   G K LS+AL        + 
Sbjct: 707 LRLENNHFKDDVMELLGSLLSAKDCH-IQKISLADNAISNKGAKALSRAL-----LVNRT 760

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            + L L+      N + ++GAK LA   K  + L  +    N I   G  +L++  + N+
Sbjct: 761 LTSLNLR-----NNNIGSKGAKFLAEALKMNQVLTSINFQNNAIEEEGAQSLAEVLQCNR 815

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L  LNL  NTI   GA  + +AL    +L  L L    L   G  ++A+ L  N TL  
Sbjct: 816 KLVSLNLRKNTIAAGGAKRIAEALKTNRTLTKLILCGNQLGDKGTVALAEALAVNHTLLS 875

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           ++L  N IS +G   L KA++    L  +N+ EN  G EG + M
Sbjct: 876 LHLQSNSISNKGMTALTKALRLNHGLVSLNLRENSIGVEGAKNM 919



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 12/250 (4%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            +LK    L  ++  +NA    G + LA++L+  C   L  L L  N +   G K +++AL
Sbjct: 782  ALKMNQVLTSINFQNNAIEEEGAQSLAEVLQ--CNRKLVSLNLRKNTIAAGGAKRIAEAL 839

Query: 280  HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                    K    L  K+ + G N+L ++G   LA       TL  + +  N I + G+T
Sbjct: 840  --------KTNRTLT-KLILCG-NQLGDKGTVALAEALAVNHTLLSLHLQSNSISNKGMT 889

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            AL+ A   N  L  LNL +N+I  +GA  +  AL +  +L  L+L   LL   G  +IA 
Sbjct: 890  ALTKALRLNHGLVSLNLRENSIGVEGAKNMAHALHENNTLQDLDLTANLLHDDGIQAIAG 949

Query: 400  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +  N  L  ++L  N I       L  A+ + + ++ +++ EN  G EGV  + + +K+
Sbjct: 950  AIKFNRGLTSLHLQWNFIKSTATKALAHALLSNSTMQLLDLQENAIGNEGVTFLAEALKT 1009

Query: 460  FGMAAALVLE 469
                  L L+
Sbjct: 1010 NASLRTLCLQ 1019



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            T++ +++ +N I + G+T L++A + N  LR L L   +    GAI + +AL    +L  
Sbjct: 984  TMQLLDLQENAIGNEGVTFLAEALKTNASLRTLCLQGVSAGTSGAIKMAEALMTNQTLQT 1043

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    +   GA ++A  L  N +L+ +NL  N + + G + +  A+K   +L  IN+ 
Sbjct: 1044 LDLRGNTVGMEGAKALANALKSNRSLKSLNLQENSLGMDGAIFIATALKGNHQLTYINLQ 1103

Query: 131  ENQFGEEGVEEMEKLMKS 148
             N  GE G + +   +++
Sbjct: 1104 GNGIGESGAKVISDAIRA 1121



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 9/251 (3%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            TL  + +  N I + G+TAL+ A   N  L  LNL +N+I  +GA  +  AL +  +L  
Sbjct: 872  TLLSLHLQSNSISNKGMTALTKALRLNHGLVSLNLRENSIGVEGAKNMAHALHENNTLQD 931

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L   LL   G  +IA  +  N  L  ++L  N I       L  A+ + + ++ +++ 
Sbjct: 932  LDLTANLLHDDGIQAIAGAIKFNRGLTSLHLQWNFIKSTATKALAHALLSNSTMQLLDLQ 991

Query: 131  ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS----DAEGDNS 186
            EN  G EGV  + + +K+      L L+      S   +  E+   N +    D  G+  
Sbjct: 992  ENAIGNEGVTFLAEALKTNASLRTLCLQGVSAGTSGAIKMAEALMTNQTLQTLDLRGNTV 1051

Query: 187  NLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-----HMSLKTGARLVELDLSDNAFGPIG 241
             +    +  +   SN+S  + N   N+           +LK   +L  ++L  N  G  G
Sbjct: 1052 GMEGAKALANALKSNRSLKSLNLQENSLGMDGAIFIATALKGNHQLTYINLQGNGIGESG 1111

Query: 242  VEGLADLLRSS 252
             + ++D +R+S
Sbjct: 1112 AKVISDAIRAS 1122



 Score = 45.1 bits (105), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%)

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
           +++ ++L DN I+ KGA  L +AL    +L  LNL +  + S GA  +A+ L  N  L  
Sbjct: 732 HIQKISLADNAISNKGAKALSRALLVNRTLTSLNLRNNNIGSKGAKFLAEALKMNQVLTS 791

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
           +N   N I  +G   L + ++   KL  +N+ +N     G + + + +K+      L+L
Sbjct: 792 INFQNNAIEEEGAQSLAEVLQCNRKLVSLNLRKNTIAAGGAKRIAEALKTNRTLTKLIL 850


>gi|320167232|gb|EFW44131.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 573

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 12/240 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           + K    L +L LS N  G  G + +   LR++   AL EL L++N +G+ G + +++AL
Sbjct: 39  AFKFHPTLAKLVLSGNQIGDAGAQAIGAALRAN--RALTELILDDNQIGVVGVQAIAEAL 96

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K  G+   L+     +N++++ GA+ +A   +    L  +++ +  I  VG  
Sbjct: 97  -------KSNGT---LQSLGLSQNQIDDAGAQAIAEALQTCPPLVALDLRRGQIGDVGAL 146

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++ A  +N  L  L L  N I   GA  + +AL    SL  L L D  +  AGAS+IA+
Sbjct: 147 AIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRLFDNEIGDAGASAIAE 206

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  NTTL+ ++L  N+IS  G   +  A+K+ + L  +N+  N+ GE+G + + K +++
Sbjct: 207 ALKVNTTLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNEIGEDGAQAISKALEA 266



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 10/199 (5%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L++  LG  G + +S+A          +  P   K+ ++G N++ + GA+ + A  + 
Sbjct: 21  LNLSSKKLGTLGAQTVSQAF---------KFHPTLAKLVLSG-NQIGDAGAQAIGAALRA 70

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            + L  + +  N I  VG+ A+++A + N  L+ L L+ N I   GA  + +AL   P L
Sbjct: 71  NRALTELILDDNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPL 130

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
             L+L    +   GA +IA+ L  NT L ++ L  N I V G   + +A+K+ T L+ + 
Sbjct: 131 VALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLR 190

Query: 440 VSENQFGEEGVEEMEKLMK 458
           + +N+ G+ G   + + +K
Sbjct: 191 LFDNEIGDAGASAIAEALK 209



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 126/309 (40%), Gaps = 71/309 (22%)

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    L + GA ++++    + TL  + L+ N+I   G   +  A++    L ++ + 
Sbjct: 21  LNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGAALRANRALTELILD 80

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLE----DDEGECSDEEQDEESEEENDSDAEGDNS 186
           +NQ G  GV+ + + +KS G   +L L     DD G  +  E                  
Sbjct: 81  DNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAE------------------ 122

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLA 246
                                            +L+T   LV LDL     G +G   +A
Sbjct: 123 ---------------------------------ALQTCPPLVALDLRRGQIGDVGALAIA 149

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
             L  + C A  EL L  N +G+ G + +++AL       K   S   L++F    N + 
Sbjct: 150 QALLQNTCLA--ELGLAQNRIGVIGAQAIAEAL-------KSNTSLRCLRLF---DNEIG 197

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           + GA  +A   K   TL+ + +  N I  VG  A++DA + N  L +LNL  N I   GA
Sbjct: 198 DAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNEIGEDGA 257

Query: 367 IPLGQALSK 375
               QA+SK
Sbjct: 258 ----QAISK 262



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 76/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + A  +  + L  + +  N I  VG+ A+++A + N  L+ L L+ N I   GA  + +A
Sbjct: 64  IGAALRANRALTELILDDNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEA 123

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   P L  L+L    +   GA +IA+ L  NT L ++ L  N I V G   + +A+K+ 
Sbjct: 124 LQTCPPLVALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEALKSN 183

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L+ + + +N+ G+ G   + + +K
Sbjct: 184 TSLRCLRLFDNEIGDAGASAIAEALK 209



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 78/147 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   +    L  +++ +  I  VG  A++ A  +N  L  L L  N I   GA  + +A
Sbjct: 120 IAEALQTCPPLVALDLRRGQIGDVGALAIAQALLQNTCLAELGLAQNRIGVIGAQAIAEA 179

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL  L L D  +  AGAS+IA+ L  NTTL+ ++L  N+IS  G   +  A+K+ 
Sbjct: 180 LKSNTSLRCLRLFDNEIGDAGASAIAEALKVNTTLDALHLNSNQISDVGAQAIADALKSN 239

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
           + L  +N+  N+ GE+G + + K +++
Sbjct: 240 SGLTYLNLERNEIGEDGAQAISKALEA 266



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 78/160 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL+ + + QN I   G  A+++A +    L  L+L    I   GA+ + QA
Sbjct: 92  IAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLVALDLRRGQIGDVGALAIAQA 151

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +   LA L L    +   GA +IA+ L  NT+L  + L  NEI   G   + +A+K  
Sbjct: 152 LLQNTCLAELGLAQNRIGVIGAQAIAEALKSNTSLRCLRLFDNEIGDAGASAIAEALKVN 211

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           T L  ++++ NQ  + G + +   +KS      L LE +E
Sbjct: 212 TTLDALHLNSNQISDVGAQAIADALKSNSGLTYLNLERNE 251



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           FK   TL  + +  N I   G  A+  A   N+ L  L L+DN I   G   + +AL   
Sbjct: 40  FKFHPTLAKLVLSGNQIGDAGAQAIGAALRANRALTELILDDNQIGVVGVQAIAEALKSN 99

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            +L  L L    +  AGA +IA+ L     L  ++L   +I   G L + +A+   T L 
Sbjct: 100 GTLQSLGLSQNQIDDAGAQAIAEALQTCPPLVALDLRRGQIGDVGALAIAQALLQNTCLA 159

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           ++ +++N+ G  G + + + +KS      L L D+E
Sbjct: 160 ELGLAQNRIGVIGAQAIAEALKSNTSLRCLRLFDNE 195



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 58/116 (50%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           LNL+   +   GA  + QA    P+LA L L    +  AGA +I   L  N  L ++ L 
Sbjct: 21  LNLSSKKLGTLGAQTVSQAFKFHPTLAKLVLSGNQIGDAGAQAIGAALRANRALTELILD 80

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
            N+I V G   + +A+K+   L+ + +S+NQ  + G + + + +++     AL L 
Sbjct: 81  DNQIGVVGVQAIAEALKSNGTLQSLGLSQNQIDDAGAQAIAEALQTCPPLVALDLR 136


>gi|380495187|emb|CCF32584.1| ran GTPase activating protein 1 [Colletotrichum higginsianum]
          Length = 423

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 10/231 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      +   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 96  KLTTINLNDNAFGINTQAPVVAFL--AAHVPLQHLYLNNNGLGPHAGILVADALSELHAK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
            E+++KEG  +  L+  I GRNRLEN   +  A  F     ++ ++M QNGI   GI+ L
Sbjct: 154 KEAARKEGRDVPYLETVICGRNRLENGSMQAWAKAFSLHNKIKEIKMVQNGIRQEGISHL 213

Query: 342 -SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            S+       LR L+L DNT T  GA  +   L     L  L L D  L + G + +A+ 
Sbjct: 214 ISEGLNHATELRILDLQDNTFTVSGAKAVASVLPTWSHLQELGLNDAYLTAKGTALVARA 273

Query: 401 LTDNTT--LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
           L       LE + L  N+I+ +  + +  A+ +    LK++ ++ N+F EE
Sbjct: 274 LAKGKQDKLEILRLAFNDITPKALIGIASAVSDSLPALKKVELNGNKFEEE 324



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F     ++ ++M QNGI   GI+ L S+      +LR L+L DNT T  GA  +  
Sbjct: 185 WAKAFSLHNKIKEIKMVQNGIRQEGISHLISEGLNHATELRILDLQDNTFTVSGAKAVAS 244

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT--LEDVNLTCNEISVQGGLDLVKAM 118
            L     L  L L D  L + G + +A+ L       LE + L  N+I+ +  + +  A+
Sbjct: 245 VLPTWSHLQELGLNDAYLTAKGTALVARALAKGKQDKLEILRLAFNDITPKALIGIASAV 304

Query: 119 KNK-TKLKQINVSENQFGEE 137
            +    LK++ ++ N+F EE
Sbjct: 305 SDSLPALKKVELNGNKFEEE 324


>gi|325090177|gb|EGC43487.1| ran GTPase activating protein [Ajellomyces capsulatus H88]
          Length = 470

 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 115/239 (48%), Gaps = 19/239 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DLSDNAFG    + L + LR+     L  L LNNNGLG    +             
Sbjct: 149 LQTVDLSDNAFGVNTKDPLVEFLRAH--LPLRHLILNNNGLGPEAAR---------SNPG 197

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITAL-SDA 344
            K   P AL+  + GRNRLE    +  A   K   K L  + M QNGIY  G+  L +  
Sbjct: 198 IKYEIP-ALETIVCGRNRLEAGSMEAWARAIKANGKGLRTIRMKQNGIYSKGVVKLLNTG 256

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
                 L   +L DNT    G++ L   LS LPSL  L + DC L + G   +AK L+  
Sbjct: 257 ICHAPELEVFDLEDNTYGKDGSVALAAVLSGLPSLRELGVDDCALTAKGWLRVAKALSAG 316

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGVEEMEKLMK 458
            NT LE + L  NEI+ +G   LV A K     LK++ ++ N F E  E +  +++L+K
Sbjct: 317 GNTKLEILKLKGNEINGKGVRALVHAAKTSLPALKKVFLNANAFDEDNENIMRLQELLK 375



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGIY  G+  L +       +L   +L DNT    G++ L   LS LPSL
Sbjct: 232 KGLRTIRMKQNGIYSKGVVKLLNTGICHAPELEVFDLEDNTYGKDGSVALAAVLSGLPSL 291

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L + DC L + G   +AK L+   NT LE + L  NEI+ +G   LV A K     LK
Sbjct: 292 RELGVDDCALTAKGWLRVAKALSAGGNTKLEILKLKGNEINGKGVRALVHAAKTSLPALK 351

Query: 126 QINVSENQFGE--EGVEEMEKLMK 147
           ++ ++ N F E  E +  +++L+K
Sbjct: 352 KVFLNANAFDEDNENIMRLQELLK 375


>gi|367004567|ref|XP_003687016.1| hypothetical protein TPHA_0I00760 [Tetrapisispora phaffii CBS 4417]
 gi|357525319|emb|CCE64582.1| hypothetical protein TPHA_0I00760 [Tetrapisispora phaffii CBS 4417]
          Length = 406

 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 123/229 (53%), Gaps = 14/229 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ L +L+  S    L+ L L+NNG+G    + + KAL +  ++ KK 
Sbjct: 113 INLSDNAFGLRTIDQLEELI--SNAINLKHLILSNNGMGPLAGERIGKALFNLAQNKKKN 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGI-TALSDAFEE 347
              L L+ FI GRNRLEN  A  LA   K   + L+ V++ QNGI   G+ T +    + 
Sbjct: 171 NKSL-LETFICGRNRLENGSALFLAIGLKSHASDLKVVKLYQNGIRPKGVATLIHYGLKY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNT- 405
           N+NL   +L DNT T   +  L Q L     SL  LNL DCLLK+ G+ S+ +   ++  
Sbjct: 230 NENLEIFDLQDNTFTATASTILAQVLPTWKHSLVELNLNDCLLKTEGSHSVFEVFQNHVF 289

Query: 406 -TLEDVNLTCNEISVQGGLD-----LVKAMKNKTKLKQINVSENQFGEE 448
             L  +    NE+  Q  L+     +++  +N  KLK + ++ N+F E+
Sbjct: 290 EKLTTLKFEYNEMG-QSTLEDVFIPILQKGENLPKLKILKINGNRFEED 337



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 10/135 (7%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    + N+ L   +L DNT T   +  L Q L     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLKYNENLEIFDLQDNTFTATASTILAQVLPTWKHSLV 263

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLD-----LVKAMKNKT 122
            LNL DCLLK+ G+ S+ +   ++    L  +    NE+  Q  L+     +++  +N  
Sbjct: 264 ELNLNDCLLKTEGSHSVFEVFQNHVFEKLTTLKFEYNEMG-QSTLEDVFIPILQKGENLP 322

Query: 123 KLKQINVSENQFGEE 137
           KLK + ++ N+F E+
Sbjct: 323 KLKILKINGNRFEED 337


>gi|320163869|gb|EFW40768.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 538

 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 20/271 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  LDL +N  G  G + LA+ L+ +    L+EL L NN +G  G + +++AL
Sbjct: 68  ALKVNTTLTCLDLGNNRIGDAGAQSLAEALKGNKT--LDELDLGNNQIGDAGAQSIAEAL 125

Query: 280 --HDCYESSKKEGSPL----------ALKV--FIAGRN----RLENEGAKMLAAVFKKLK 321
             +   +     GS +          ALKV   + G N    ++ + GAK+LA   K   
Sbjct: 126 KVNKTLDELDLAGSLIGDAGVQAIAEALKVNTTLTGLNLDGNQIGDAGAKVLAEALKVNS 185

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           TL ++++  N I   G  A+++A   N  +  L L++N I   GA  +G+AL     +  
Sbjct: 186 TLTKLDLDANQIGDAGAQAIAEALRVNPTVTKLRLSENQIGDAGAQAIGEALKVNTGVTW 245

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           LNL +  +  AGA +IA+ L  NTTL  + L+ N+I   G   + +A+K  T L ++ +S
Sbjct: 246 LNLWENRIGDAGAQAIAEALKVNTTLNRLGLSENQIGNVGARAIAEALKVNTTLTELGLS 305

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           ENQ G  G E + + +K     A L L  +E
Sbjct: 306 ENQIGNVGAEAIAEALKVNTTLAVLGLHTNE 336



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 13/247 (5%)

Query: 208 NQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNG 266
           NQ  +   QS   +LK    L ELDL+ +  G  GV+ +A+ L+ +    L  L L+ N 
Sbjct: 111 NQIGDAGAQSIAEALKVNKTLDELDLAGSLIGDAGVQAIAEALKVNTT--LTGLNLDGNQ 168

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           +G  G K+L++AL        K  S L      A  N++ + GA+ +A   +   T+ ++
Sbjct: 169 IGDAGAKVLAEAL--------KVNSTLTKLDLDA--NQIGDAGAQAIAEALRVNPTVTKL 218

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
            + +N I   G  A+ +A + N  +  LNL +N I   GA  + +AL    +L  L L +
Sbjct: 219 RLSENQIGDAGAQAIGEALKVNTGVTWLNLWENRIGDAGAQAIAEALKVNTTLNRLGLSE 278

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
             + + GA +IA+ L  NTTL ++ L+ N+I   G   + +A+K  T L  + +  N+ G
Sbjct: 279 NQIGNVGARAIAEALKVNTTLTELGLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIG 338

Query: 447 EEGVEEM 453
           ++G  E+
Sbjct: 339 DDGACEL 345



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 59/362 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  +++  N I   G  +L++A + NK L  L+L +N I   GA  + +A
Sbjct: 65  IAEALKVNTTLTCLDLGNNRIGDAGAQSLAEALKGNKTLDELDLGNNQIGDAGAQSIAEA 124

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   L+  AG  +IA+ L  NTTL  +NL  N+I   G   L +A+K  
Sbjct: 125 LKVNKTLDELDLAGSLIGDAGVQAIAEALKVNTTLTGLNLDGNQIGDAGAKVLAEALKVN 184

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           + L ++++  NQ G+ G + + + ++       L L +                      
Sbjct: 185 STLTKLDLDANQIGDAGAQAIAEALRVNPTVTKLRLSE---------------------- 222

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
                       N   +A  Q+                +LK    +  L+L +N  G  G
Sbjct: 223 ------------NQIGDAGAQAIGE-------------ALKVNTGVTWLNLWENRIGDAG 257

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
            + +A+ L+ +    L  L L+ N +G  G + +++AL     ++  E   L L      
Sbjct: 258 AQAIAEALKVNTT--LNRLGLSENQIGNVGARAIAEALK--VNTTLTE---LGLS----- 305

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
            N++ N GA+ +A   K   TL  + +  N I   G   L+DA E N  +  L+L+ N +
Sbjct: 306 ENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALEVNTTMTKLHLDRNCM 365

Query: 362 TY 363
           TY
Sbjct: 366 TY 367



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 174/400 (43%), Gaps = 64/400 (16%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++ +N I      A+++A + N  L  L+L +N I   GA  L +AL    +L  
Sbjct: 46  TLTWLKLEKNQIGDPEAQAIAEALKVNTTLTCLDLGNNRIGDAGAQSLAEALKGNKTLDE 105

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+LG+  +  AGA SIA+ L  N TL++++L  + I   G   + +A+K  T L  +N+ 
Sbjct: 106 LDLGNNQIGDAGAQSIAEALKVNKTLDELDLAGSLIGDAGVQAIAEALKVNTTLTGLNLD 165

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            NQ G+ G + + + +K                                     NS L+ 
Sbjct: 166 GNQIGDAGAKVLAEALKV------------------------------------NSTLTK 189

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLL 249
            D             ++NQ  +   Q+   +L+    + +L LS+N  G  G + + + L
Sbjct: 190 LDL------------DANQIGDAGAQAIAEALRVNPTVTKLRLSENQIGDAGAQAIGEAL 237

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           + +    +  L L  N +G  G + +++AL               L       N++ N G
Sbjct: 238 KVNT--GVTWLNLWENRIGDAGAQAIAEALK----------VNTTLNRLGLSENQIGNVG 285

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           A+ +A   K   TL  + + +N I +VG  A+++A + N  L  L L+ N I   GA  L
Sbjct: 286 ARAIAEALKVNTTLTELGLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACEL 345

Query: 370 GQALSKLPSLAILNLG-DCLLKSAGASSIAKYLTDNTTLE 408
             AL    ++  L+L  +C+  + G S++     DN  LE
Sbjct: 346 ADALEVNTTMTKLHLDRNCM--TYGCSALLDAREDNCRLE 383



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 4/168 (2%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA   K   TL  +++  N I   G  A+++A   N  +  L L++N I   GA  +G+
Sbjct: 176 VLAEALKVNSTLTKLDLDANQIGDAGAQAIAEALRVNPTVTKLRLSENQIGDAGAQAIGE 235

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL     +  LNL +  +  AGA +IA+ L  NTTL  + L+ N+I   G   + +A+K 
Sbjct: 236 ALKVNTGVTWLNLWENRIGDAGAQAIAEALKVNTTLNRLGLSENQIGNVGARAIAEALKV 295

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED----DEGEC 164
            T L ++ +SENQ G  G E + + +K     A L L      D+G C
Sbjct: 296 NTTLTELGLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGAC 343



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ +  A+ +A   K   TL  +++  N I   G  +L++A + NK L  L+L +N I
Sbjct: 54  KNQIGDPEAQAIAEALKVNTTLTCLDLGNNRIGDAGAQSLAEALKGNKTLDELDLGNNQI 113

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +AL    +L  L+L   L+  AG  +IA+ L  NTTL  +NL  N+I   G
Sbjct: 114 GDAGAQSIAEALKVNKTLDELDLAGSLIGDAGVQAIAEALKVNTTLTGLNLDGNQIGDAG 173

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              L +A+K  + L ++++  NQ G+ G + + + ++
Sbjct: 174 AKVLAEALKVNSTLTKLDLDANQIGDAGAQAIAEALR 210


>gi|255939163|ref|XP_002560351.1| Pc15g01260 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584973|emb|CAP83012.1| Pc15g01260 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 419

 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 121/241 (50%), Gaps = 13/241 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++L+DNAFG      L + L  S    L  L LNNNGLG      ++ AL    E  ++ 
Sbjct: 100 VNLNDNAFGLRTQAPLIEFL--SRHVPLRHLILNNNGLGPAAGSQVADALSKLAERKEEA 157

Query: 290 ---GSPLAL-KVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT-ALSD 343
              G  +AL +  + GRNRLEN   +  A  +K     L+ V+M QNGI   GI+  L+ 
Sbjct: 158 RNCGEEVALLESVVCGRNRLENSSMEAWARAYKAHAAGLKSVKMTQNGIRSEGISHLLTQ 217

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
                ++L  L+L DNT T  G+  L   LS  PSL  L +GDCLL + G   +AK L +
Sbjct: 218 GLYHAQSLEVLDLQDNTFTNVGSTALSNVLSGWPSLRELGVGDCLLSARGGVKVAKALAE 277

Query: 404 --NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE--GVEEMEKLMK 458
             N  L+ + L  NE+  +       A K     L+++ ++ N F EE   + E+ +L++
Sbjct: 278 NKNQKLQTLRLQYNEMKAEAVKGFTHAAKTALPSLRRVELNGNIFSEEDPNIIELRELLE 337

Query: 459 S 459
           +
Sbjct: 338 A 338



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 6/143 (4%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ V+M QNGI   GI+  L+      + L  L+L DNT T  G+  L   LS  PSL  
Sbjct: 196 LKSVKMTQNGIRSEGISHLLTQGLYHAQSLEVLDLQDNTFTNVGSTALSNVLSGWPSLRE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +AK L +  N  L+ + L  NE+  +       A K     L+++
Sbjct: 256 LGVGDCLLSARGGVKVAKALAENKNQKLQTLRLQYNEMKAEAVKGFTHAAKTALPSLRRV 315

Query: 128 NVSENQFGEE--GVEEMEKLMKS 148
            ++ N F EE   + E+ +L+++
Sbjct: 316 ELNGNIFSEEDPNIIELRELLEA 338


>gi|342879831|gb|EGU81065.1| hypothetical protein FOXB_08413 [Fusarium oxysporum Fo5176]
          Length = 418

 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 117/235 (49%), Gaps = 18/235 (7%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  +    L+ L LNNNG+G     L++ AL   H  
Sbjct: 96  KLNTINLNDNAFGLNVQAPLVAFL--AAHVPLQHLYLNNNGMGPHAGILIADALSELHSK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E+++KEG  +  L+  I GRNRLEN      A  +K    ++ ++M QNGI   GI+  
Sbjct: 154 KEAARKEGKEVPDLETVICGRNRLENGSMTAWAKAYKLHNKIKVIKMVQNGIRQEGISHL 213

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L++       L  L+L DNT T  GA  L + ++   SL  L +GD LL + G   +A  
Sbjct: 214 LAEGLSHASKLEVLDLQDNTFTVTGARALSKVVANWTSLQELGVGDSLLGAKGGVLVAAA 273

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-----LKQINVSENQFGEE 448
           L    N  LE + L  NEI+ +G    +KA     K     LK+I ++ N   E+
Sbjct: 274 LAKGKNAKLETLRLQYNEITSKG----IKAFATAAKDGLPALKRIEINGNILTED 324



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 22/183 (12%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  +K    ++ ++M QNGI   GI+  L++      KL  L+L DNT T  GA  L +
Sbjct: 185 WAKAYKLHNKIKVIKMVQNGIRQEGISHLLAEGLSHASKLEVLDLQDNTFTVTGARALSK 244

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM 118
            ++   SL  L +GD LL + G   +A  L    N  LE + L  NEI+ +G    +KA 
Sbjct: 245 VVANWTSLQELGVGDSLLGAKGGVLVAAALAKGKNAKLETLRLQYNEITSKG----IKAF 300

Query: 119 KNKTK-----LKQINVSENQFGE--EGVEEMEKLM----KSFGMAAALVLEDDEGECSDE 167
               K     LK+I ++ N   E  E +  +++L+    + FG    +V EDD G   DE
Sbjct: 301 ATAAKDGLPALKRIEINGNILTEDDESIPILQELLEERKEKFG--GDIVNEDDWG--VDE 356

Query: 168 EQD 170
            +D
Sbjct: 357 LED 359


>gi|322708801|gb|EFZ00378.1| ran GTPase activating protein 1 [Metarhizium anisopliae ARSEF 23]
          Length = 417

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 120/244 (49%), Gaps = 16/244 (6%)

Query: 213 TSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
           TS  +H +L T      ++L+DNAFG      L   L  S    L+ L LNNNGLG    
Sbjct: 89  TSILNHPNLHT------VNLNDNAFGLNTQAPLVAFL--SAHVPLQHLYLNNNGLGPHAG 140

Query: 273 KLLSKAL---HDCYESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
            L++ AL   H   E+++KEG  +  L+  I GRNRLEN      A  +K    ++ ++M
Sbjct: 141 ILVADALSELHAKKEAARKEGKQVPDLETVICGRNRLENGSMTAWAKAYKLHNKIQHIKM 200

Query: 329 PQNGIYHVGITAL-SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
            QNGI   GI+ L S+       L+ L+L DNT T+ GA  L   ++    +  L +GD 
Sbjct: 201 VQNGIRQEGISHLISEGLVHATELQILDLQDNTFTFTGARALANVVTNWTVVRELGIGDS 260

Query: 388 LLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLKQINVSENQ 444
           LL + G    AK L    N  +E + L  N+I+  G       A      LK+I ++ N+
Sbjct: 261 LLSAKGGVLFAKALAKGKNQKVEILRLQYNDITATGVKAFAAAAKDALPALKRIELNGNK 320

Query: 445 FGEE 448
           F E+
Sbjct: 321 FDED 324



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 8/169 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  +K    ++H++M QNGI   GI+ L S+      +L+ L+L DNT T+ GA  L  
Sbjct: 185 WAKAYKLHNKIQHIKMVQNGIRQEGISHLISEGLVHATELQILDLQDNTFTFTGARALAN 244

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKA 117
            ++    +  L +GD LL + G    AK L    N  +E + L  N+I+  G       A
Sbjct: 245 VVTNWTVVRELGIGDSLLSAKGGVLFAKALAKGKNQKVEILRLQYNDITATGVKAFAAAA 304

Query: 118 MKNKTKLKQINVSENQFGE--EGVEEMEKLM--KSFGMAAALVLEDDEG 162
                 LK+I ++ N+F E  E +  +++L+  +   +A  ++ ED+ G
Sbjct: 305 KDALPALKRIELNGNKFDEDDESILFLQELLDQRKEKLAGDVINEDEWG 353


>gi|4344|emb|CAA35248.1| RNA1 [Saccharomyces cerevisiae]
          Length = 407

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 6/177 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   +E L D +  +    ++ L L+NNG+G    + + KAL    ++ K  
Sbjct: 113 VNLSDNAFGLRTIELLEDYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ FI GRNR+      +L++ F+K L++L+ V++ QNGI   G+ T +    + 
Sbjct: 171 SKPF-LETFICGRNRVREWIRSLLSSGFEKPLRSLKVVKLYQNGIRPKGVATLIHYGLQY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTD 403
            KNL  L+L DNT T   ++ L +AL     SL  LNL DCLLK+AG+  + K  T+
Sbjct: 230 LKNLEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFTE 286



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 7   KKLKTLEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           K L++L+ V++ QNGI   G+ T +    +  K L  L+L DNT T   ++ L +AL   
Sbjct: 199 KPLRSLKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTW 258

Query: 66  P-SLAILNLGDCLLKSAGASSIAKYLTD 92
             SL  LNL DCLLK+AG+  + K  T+
Sbjct: 259 KDSLFELNLNDCLLKTAGSDEVFKVFTE 286


>gi|410076392|ref|XP_003955778.1| hypothetical protein KAFR_0B03460 [Kazachstania africana CBS 2517]
 gi|372462361|emb|CCF56643.1| hypothetical protein KAFR_0B03460 [Kazachstania africana CBS 2517]
          Length = 409

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 129/246 (52%), Gaps = 17/246 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  ++LSDNAFG   ++ L   + ++   +L  L L+NNG+G    + + KAL    ++
Sbjct: 109 KLTIVNLSDNAFGLRTIDSLESYISNAV--SLRHLLLSNNGMGPFAGERIGKALFQLAKN 166

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK----LKTLERVEMPQNGIYHVGIT-A 340
            K   +   L+ FI GRNRLEN  +  LA   K     LKT   V++ QNGI   GI   
Sbjct: 167 KKAAKADSLLETFICGRNRLENGSSLYLAIGLKAHGDDLKT---VKLYQNGIRPRGIMNL 223

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAK 399
           LS  F+ NKNL  L+L DNT T   +  L Q L     +L  LNL DCLLK  G   + K
Sbjct: 224 LSYGFKFNKNLEILDLQDNTFTKSASFILAQCLPIWKDTLKELNLNDCLLKGTGCDVVFK 283

Query: 400 YLTDN--TTLEDVNLTCNEISVQGGLD-LVKAMK--NKTKLKQINVSENQFGEEGVEEME 454
            L D     LE + +  NE+  +  ++  + A++  N  KLK++ ++ N+  EE  + ++
Sbjct: 284 VLKDTQFANLETLKVEYNELKQETIINYFLPALEENNLPKLKELQINGNRL-EEDSDALD 342

Query: 455 KLMKSF 460
            L + F
Sbjct: 343 TLQEKF 348



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 8/145 (5%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   GI   LS  F+ NK L  L+L DNT T   +  L Q L     +L 
Sbjct: 205 LKTVKLYQNGIRPRGIMNLLSYGFKFNKNLEILDLQDNTFTKSASFILAQCLPIWKDTLK 264

Query: 70  ILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEISVQGGLD-LVKAMK--NKTKL 124
            LNL DCLLK  G   + K L D     LE + +  NE+  +  ++  + A++  N  KL
Sbjct: 265 ELNLNDCLLKGTGCDVVFKVLKDTQFANLETLKVEYNELKQETIINYFLPALEENNLPKL 324

Query: 125 KQINVSENQFGEEGVEEMEKLMKSF 149
           K++ ++ N+  EE  + ++ L + F
Sbjct: 325 KELQINGNRL-EEDSDALDTLQEKF 348


>gi|154294408|ref|XP_001547645.1| hypothetical protein BC1G_13724 [Botryotinia fuckeliana B05.10]
 gi|347838533|emb|CCD53105.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 419

 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 14/254 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS---KALHDCYESS 286
           ++L+DNAFG      L   L S     L+ L LNNNGLG     L++    ALH     +
Sbjct: 101 VNLNDNAFGLNTQAPLVAFLSSHT--PLQHLILNNNGLGPHAGVLIADALSALHAKKVEA 158

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
           +  G  +  L+  I GRNRLEN      A  +     ++ V+M QNGI   GI+  LS+ 
Sbjct: 159 RAAGKQVPDLETVICGRNRLENGSMTAWAKAYSLHTGVKEVKMVQNGIRQEGISHLLSEG 218

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD- 403
               K +  L+L DNT T  G+  L + +    ++  L +GD LL   G+   A+ L   
Sbjct: 219 LRYAKGIEILDLQDNTFTITGSKALARVVGGWANIQELGVGDSLLGGKGSVIFAEALKKG 278

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEG--VEEMEKLM-- 457
            NT LE + L  N+I V+G      A K    KLK+I ++ N+F E+   + E+++L+  
Sbjct: 279 RNTKLEILRLQFNDIGVKGLTVFTAAAKEALPKLKKIELNGNKFDEDHDCIVELKELLEE 338

Query: 458 KSFGMAAALVLEDD 471
           +   +A  +++EDD
Sbjct: 339 RKEKLAGEIIIEDD 352



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 8/159 (5%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ V+M QNGI   GI+  LS+     K +  L+L DNT T  G+  L + +    ++  
Sbjct: 196 VKEVKMVQNGIRQEGISHLLSEGLRYAKGIEILDLQDNTFTITGSKALARVVGGWANIQE 255

Query: 71  LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GD LL   G+   A+ L    NT LE + L  N+I V+G      A K    KLK+I
Sbjct: 256 LGVGDSLLGGKGSVIFAEALKKGRNTKLEILRLQFNDIGVKGLTVFTAAAKEALPKLKKI 315

Query: 128 NVSENQFGEEG--VEEMEKLM--KSFGMAAALVLEDDEG 162
            ++ N+F E+   + E+++L+  +   +A  +++EDD G
Sbjct: 316 ELNGNKFDEDHDCIVELKELLEERKEKLAGEIIIEDDWG 354


>gi|432111550|gb|ELK34664.1| Protein NLRC3 [Myotis davidii]
          Length = 1065

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 192/449 (42%), Gaps = 61/449 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 668  IQRISLAENQISNKGAKALARSLLVNRSLTSLDLRCNSIGPQGAKALADALKINRTLASL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA  +A+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 728  SLQSNRIRDDGAKFMAEALAANRTLSVMHLQKNTIGPMGAQHMADALKQNRSLKELMFSS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K            ++G    E  D +S   +D+        L  N
Sbjct: 788  NSIGDGGAKALAEALKV-----------NQGL---ETLDLQSNSISDTGVAALMGALCAN 833

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L+L +N+  P   EG  DL R+
Sbjct: 834  RA---------------------------------LLSLNLRENSISP---EGAQDLARA 857

Query: 252  SCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
             C    L+ L L  N L   G + ++ A+ + +           L       N ++   A
Sbjct: 858  LCTNSTLKNLDLTANLLHDQGAQAIAMAVRENH----------TLMSLHLQWNFIQAGAA 907

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            K L    +  K+L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG
Sbjct: 908  KALGQALQFNKSLISLDLQENAIGDEGACAVASALKANTALTALYLQVASIGAPGAQALG 967

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
            +AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+ 
Sbjct: 968  EALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGMICIATALS 1027

Query: 431  NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                ++ IN+  N  GE G   + + +K+
Sbjct: 1028 GNHGIQHINLQGNHIGESGARMISEAIKT 1056



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 123/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L +N +   G K +++AL
Sbjct: 689 SLLVNRSLTSLDLRCNSIGPQGAKALADALKIN--RTLASLSLQSNRIRDDGAKFMAEAL 746

Query: 280 H-----DCYESSKKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                       K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 747 AANRTLSVMHLQKNTIGPMGAQHMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQ 806

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            LE +++  N I   G+ AL  A   N+ L  LNL +N+I+ +GA  L +AL    +L  
Sbjct: 807 GLETLDLQSNSISDTGVAALMGALCANRALLSLNLRENSISPEGAQDLARALCTNSTLKN 866

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 867 LDLTANLLHDQGAQAIAMAVRENHTLMSLHLQWNFIQAGAAKALGQALQFNKSLISLDLQ 926

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G+EG   +   +K+     AL L+
Sbjct: 927 ENAIGDEGACAVASALKANTALTALYLQ 954



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 156/381 (40%), Gaps = 32/381 (8%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G   +++A   N+ L  ++L  NTI   GA  +  A
Sbjct: 714  LADALKINRTLASLSLQSNRIRDDGAKFMAEALAANRTLSVMHLQKNTIGPMGAQHMADA 773

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L +  SL  L      +   GA ++A+ L  N  LE ++L  N IS  G   L+ A+   
Sbjct: 774  LKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLETLDLQSNSISDTGVAALMGALCAN 833

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L  +N+ EN    EG +++ + +                 C++          N    
Sbjct: 834  RALLSLNLRENSISPEGAQDLARAL-----------------CTNSTLKNLDLTANLLHD 876

Query: 182  EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
            +G  +       NH+  + +   N        +     +L+    L+ LDL +NA G  G
Sbjct: 877  QGAQAIAMAVRENHTLMSLHLQWNFIQA--GAAKALGQALQFNKSLISLDLQENAIGDEG 934

Query: 242  VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
               +A  L+++   AL  L L    +G  G + L +AL               L++    
Sbjct: 935  ACAVASALKANT--ALTALYLQVASIGAPGAQALGEAL----------AVNRTLEILDLR 982

Query: 302  RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
             N +   GAK LA   K   +L R+ + +N +   G+  ++ A   N  ++H+NL  N I
Sbjct: 983  GNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGMICIATALSGNHGIQHINLQGNHI 1042

Query: 362  TYKGAIPLGQAL-SKLPSLAI 381
               GA  + +A+ +  PS  +
Sbjct: 1043 GESGARMISEAIKTNAPSCTV 1063


>gi|406866009|gb|EKD19049.1| ran GTPase activating protein 1 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 413

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 120/238 (50%), Gaps = 12/238 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS---KALHDC 282
           +L  ++L+DNAFG      L   L S     L+ L LNNNGLG     L++    ALH  
Sbjct: 87  KLHTINLNDNAFGLNTQAPLVAFLSSHV--PLQHLILNNNGLGPHAGILVADALSALHAK 144

Query: 283 YESSKKEGS--PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT- 339
            E ++K G   PL L+  I GRNRLEN      A  +     ++ V+M QNGI   GI+ 
Sbjct: 145 KEEARKAGQEVPL-LETVICGRNRLENGSMTAWAKAYSLHTGVKEVKMVQNGIRQEGISH 203

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            L+D     K ++ L+L DNT T  GA  L         +  L +GD LL + GA   A 
Sbjct: 204 LLTDGLRHAKGIKVLDLQDNTFTILGAKALATVAPGWTEVQELGIGDSLLGAKGAVLFAD 263

Query: 400 YL--TDNTTLEDVNLTCNEISVQGGLDLVK-AMKNKTKLKQINVSENQFGEEGVEEME 454
            L   +N  LE + L  N+I+ +G     K A+++   LK+I ++ N+F E+ +  M+
Sbjct: 264 SLGRGENRKLELLRLQYNDITAKGLEAFAKAAVESLPALKKIELNGNKFSEDDLSLMK 321



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 8/159 (5%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ V+M QNGI   GI+  L+D     K ++ L+L DNT T  GA  L         +  
Sbjct: 186 VKEVKMVQNGIRQEGISHLLTDGLRHAKGIKVLDLQDNTFTILGAKALATVAPGWTEVQE 245

Query: 71  LNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVK-AMKNKTKLKQI 127
           L +GD LL + GA   A  L   +N  LE + L  N+I+ +G     K A+++   LK+I
Sbjct: 246 LGIGDSLLGAKGAVLFADSLGRGENRKLELLRLQYNDITAKGLEAFAKAAVESLPALKKI 305

Query: 128 NVSENQFGEEGVEEM---EKLM-KSFGMAAALVLEDDEG 162
            ++ N+F E+ +  M   E L+ +   +A   ++EDD G
Sbjct: 306 ELNGNKFSEDDLSLMKLRELLVDRKEKLAGDNIIEDDWG 344


>gi|46107358|ref|XP_380738.1| hypothetical protein FG00562.1 [Gibberella zeae PH-1]
          Length = 419

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 114/231 (49%), Gaps = 10/231 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  S    L+ L LNNNG+G     L++ AL   H  
Sbjct: 96  KLTTVNLNDNAFGLNVQAPLVAFL--SAHVPLQHLYLNNNGMGPHAGILIADALSELHGK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E+++KEG  +  L+  I GRNRLEN      A  +     ++ V+M QNGI   G++  
Sbjct: 154 KEAARKEGKEVPDLETVICGRNRLENGSMTAWAKAYSLHNKIKTVKMVQNGIRQEGVSHL 213

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L++       L+ L+L DNT T  GA  L + +S   ++  L +GD LL   G   +A  
Sbjct: 214 LTEGLSHASELKVLDLQDNTFTVTGARALSKVVSNWATIQELGVGDSLLGPKGGILVANA 273

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
           L    N  LE + L  NEI  +G      A K+    LK+I ++ N   E+
Sbjct: 274 LAKGKNNKLEILRLQYNEIPAKGIQAFATAAKDGLPALKRIEINGNILTED 324



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 11/163 (6%)

Query: 8   KLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+KT   V+M QNGI   G++  L++      +L+ L+L DNT T  GA  L + +S   
Sbjct: 194 KIKT---VKMVQNGIRQEGVSHLLTEGLSHASELKVLDLQDNTFTVTGARALSKVVSNWA 250

Query: 67  SLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TK 123
           ++  L +GD LL   G   +A  L    N  LE + L  NEI  +G      A K+    
Sbjct: 251 TIQELGVGDSLLGPKGGILVANALAKGKNNKLEILRLQYNEIPAKGIQAFATAAKDGLPA 310

Query: 124 LKQINVSENQFGE--EGVEEMEKLM--KSFGMAAALVLEDDEG 162
           LK+I ++ N   E  E +  +++L+  +    A  +V ED+ G
Sbjct: 311 LKRIEINGNILTEDDESIIALQELLEERKEKFAGDIVNEDEWG 353


>gi|426255089|ref|XP_004021197.1| PREDICTED: protein NLRC3 [Ovis aries]
          Length = 1048

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 184/422 (43%), Gaps = 52/422 (12%)

Query: 39   KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            +++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA ++A  L  N TL  
Sbjct: 669  RIQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLAS 728

Query: 99   VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
            ++L  N I   G   + +A+     L  +++ +N  G  G ++M   +K       L+L+
Sbjct: 729  LSLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELILQ 788

Query: 159  DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
                          S   +D         L                         +N   
Sbjct: 789  --------------SNSISDPGVAAPLGALR------------------------TNPKL 810

Query: 219  MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            ++L T   L+ L+L +N+ GP G   LA  LR++    L+ L L  N L   G + +++A
Sbjct: 811  LALCTNQTLLSLNLRENSIGPEGARDLAGALRTNS--TLKSLDLTANLLHDQGAQAVAEA 868

Query: 279  LHD-CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
            + + C           AL       N ++   AK L    +   +L  +++ +N I   G
Sbjct: 869  VRENC-----------ALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGDEG 917

Query: 338  ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
             +A++ A + N  L  L L   +I   GA  LG+AL+   +L IL+L    ++ AGA ++
Sbjct: 918  ASAVASALKVNTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIEVAGAKAL 977

Query: 398  AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            A  L  N++L  +NL  N + ++G + +  A+     L+ IN+  N  GE G   + + +
Sbjct: 978  ANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQGNHIGESGARMISEAI 1037

Query: 458  KS 459
            K+
Sbjct: 1038 KT 1039



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 174/424 (41%), Gaps = 50/424 (11%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 670  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 729

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +  
Sbjct: 730  SLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELILQS 789

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N   + GV      +++     AL        C+++     +  EN    EG        
Sbjct: 790  NSISDPGVAAPLGALRTNPKLLAL--------CTNQTLLSLNLRENSIGPEG-------- 833

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
                                  +     +L+T + L  LDL+ N     G + +A+ +R 
Sbjct: 834  ----------------------ARDLAGALRTNSTLKSLDLTANLLHDQGAQAVAEAVRE 871

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +C  AL  L L  N +     K L +AL     +S        L       N + +EGA 
Sbjct: 872  NC--ALTSLHLQWNFIQAGAAKALGQALQ--LNTS--------LTSLDLQENAIGDEGAS 919

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             +A+  K    L  + +    I   G  AL +A   N+ L  L+L  NTI   GA  L  
Sbjct: 920  AVASALKVNTALTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIEVAGAKALAN 979

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL    SL  LNL +  L   GA  +A  L+ N  L  +NL  N I   G   + +A+K 
Sbjct: 980  ALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQGNHIGESGARMISEAIKT 1039

Query: 432  KTKL 435
               L
Sbjct: 1040 NAPL 1043



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 21/259 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L +N +   G + +++AL
Sbjct: 691 SLLVNRSLTTLDLRSNSIGPQGAKALADALKIN--RTLASLSLQSNRIRDDGARSMAEAL 748

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                ++ +  S L L+     +N +   G + +A   K+ ++L+ + +  N I   G+ 
Sbjct: 749 -----ATNRTLSVLHLQ-----KNSIGPVGTQQMADALKQNRSLKELILQSNSISDPGVA 798

Query: 340 ALSDAFEEN---------KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           A   A   N         + L  LNL +N+I  +GA  L  AL    +L  L+L   LL 
Sbjct: 799 APLGALRTNPKLLALCTNQTLLSLNLRENSIGPEGARDLAGALRTNSTLKSLDLTANLLH 858

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
             GA ++A+ + +N  L  ++L  N I       L +A++  T L  +++ EN  G+EG 
Sbjct: 859 DQGAQAVAEAVRENCALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGDEGA 918

Query: 451 EEMEKLMKSFGMAAALVLE 469
             +   +K      AL L+
Sbjct: 919 SAVASALKVNTALTALYLQ 937



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            +L  +++ +N I   G +A++ A + N  L  L L   +I   GA  LG+AL+   +L I
Sbjct: 902  SLTSLDLQENAIGDEGASAVASALKVNTALTALYLQVASIGAPGAQALGEALAVNRTLEI 961

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    ++ AGA ++A  L  N++L  +NL  N + ++G + +  A+     L+ IN+ 
Sbjct: 962  LDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQ 1021

Query: 131  ENQFGEEGVEEMEKLMKS 148
             N  GE G   + + +K+
Sbjct: 1022 GNHIGESGARMISEAIKT 1039



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 149/383 (38%), Gaps = 72/383 (18%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G  ++++A   N+ L  L+L  N+I   G   +  A
Sbjct: 716  LADALKINRTLASLSLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADA 775

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT---------TLEDVNLTCNEISVQGGL 112
            L +  SL  L L    +   G ++    L  N          TL  +NL  N I  +G  
Sbjct: 776  LKQNRSLKELILQSNSISDPGVAAPLGALRTNPKLLALCTNQTLLSLNLRENSIGPEGAR 835

Query: 113  DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
            DL  A++  + LK ++++ N   ++G + +                              
Sbjct: 836  DLAGALRTNSTLKSLDLTANLLHDQGAQAV------------------------------ 865

Query: 173  SEEENDSDAEGDNSNLS--HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVEL 230
                  ++A  +N  L+  H   N     + ++   + Q  NTS            L  L
Sbjct: 866  ------AEAVRENCALTSLHLQWNFIQAGAAKALGQALQL-NTS------------LTSL 906

Query: 231  DLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEG 290
            DL +NA G  G   +A  L+ +   AL  L L    +G  G + L +AL           
Sbjct: 907  DLQENAIGDEGASAVASALKVNT--ALTALYLQVASIGAPGAQALGEAL----------A 954

Query: 291  SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
                L++     N +E  GAK LA   K   +L R+ + +N +   G   ++ A   N  
Sbjct: 955  VNRTLEILDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHG 1014

Query: 351  LRHLNLNDNTITYKGAIPLGQAL 373
            LRH+NL  N I   GA  + +A+
Sbjct: 1015 LRHINLQGNHIGESGARMISEAI 1037



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL++A + N  LR LNL +N++  +GAI +  ALS    L 
Sbjct: 957  RTLEILDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLR 1016

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
             +NL    +  +GA  I++ +  N  L  V +
Sbjct: 1017 HINLQGNHIGESGARMISEAIKTNAPLCTVEM 1048


>gi|344291959|ref|XP_003417696.1| PREDICTED: protein NLRC3 [Loxodonta africana]
          Length = 1067

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 193/451 (42%), Gaps = 63/451 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTALDLRGNSIGPQGAKALADALKINRTLASL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    +K  GA SIA+ L  N TL  + L  N I   G   +  A+K    LK++  S 
Sbjct: 728  SLQSNAIKDDGAGSIAEALASNRTLCMLCLQKNTIGPVGAQRMADALKQNRSLKELIFSS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQD--EESEEENDSDAEGDNSNLS 189
            N   + G + + + +K         LE  EG C    +D  +       S+A+G  S  S
Sbjct: 788  NSISDRGAKALAEALK-----VNQGLESLEGVCLTPSRDPVDRGPPSARSEAQGLLSFFS 842

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                                                      L +N+  P G + LA   
Sbjct: 843  ------------------------------------------LRENSISPEGAQALA--- 857

Query: 250  RSSCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
            R+ C    L+ L L  N L   G + ++ A+ +      +  + L L+      N L+  
Sbjct: 858  RALCTNSTLKNLDLTANLLHDRGAQAIAGAVRE-----NRALTSLHLQW-----NFLQAS 907

Query: 309  GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
             A+ L    +  ++L  +++ +N I   G +A++ A + N  L  L L   +I   GA  
Sbjct: 908  AAEALGHALQLNRSLVSLDLQENAIGDEGASAVARALKANTALTALYLQVASIGAPGAQA 967

Query: 369  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
            LG+AL+   +L +L+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A
Sbjct: 968  LGEALAVNRTLEVLDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAVCIATA 1027

Query: 429  MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            +     L+ IN+  N  GE G   + + +++
Sbjct: 1028 LSGNHGLQHINLQGNHIGESGTRMISEAVRT 1058



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G +A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 920  RSLVSLDLQENAIGDEGASAVARALKANTALTALYLQVASIGAPGAQALGEALAVNRTLE 979

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+     L+ IN+
Sbjct: 980  VLDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAVCIATALSGNHGLQHINL 1039

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  GE G   + + +++
Sbjct: 1040 QGNHIGESGTRMISEAVRT 1058



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ + L  + +  N +      AL  A + N+ L  L+L +N I  +GA  + +A
Sbjct: 884  IAGAVRENRALTSLHLQWNFLQASAAEALGHALQLNRSLVSLDLQENAIGDEGASAVARA 943

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + + GA ++ + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 944  LKANTALTALYLQVASIGAPGAQALGEALAVNRTLEVLDLRGNAIGVAGAKALANALKVN 1003

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1004 SSLRRLNLQENSLGMDG 1020



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 149/370 (40%), Gaps = 41/370 (11%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G  ++++A   N+ L  L L  NTI   GA  +  A
Sbjct: 714  LADALKINRTLASLSLQSNAIKDDGAGSIAEALASNRTLCMLCLQKNTIGPVGAQRMADA 773

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT---TLEDVNLTCNEISVQGGLDLVKAM 118
            L +  SL  L      +   GA ++A+ L  N    +LE V LT +   V  G    ++ 
Sbjct: 774  LKQNRSLKELIFSSNSISDRGAKALAEALKVNQGLESLEGVCLTPSRDPVDRGPPSARS- 832

Query: 119  KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSD---EEQDEESEE 175
            + +  L   ++ EN    EG + + + +                 C++   +  D  +  
Sbjct: 833  EAQGLLSFFSLRENSISPEGAQALARAL-----------------CTNSTLKNLDLTANL 875

Query: 176  ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
             +D  A+     +  N +  S +       N  Q+       H +L+    LV LDL +N
Sbjct: 876  LHDRGAQAIAGAVRENRALTSLHL----QWNFLQASAAEALGH-ALQLNRSLVSLDLQEN 930

Query: 236  AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
            A G  G   +A  L+++   AL  L L    +G  G + L +AL               L
Sbjct: 931  AIGDEGASAVARALKANT--ALTALYLQVASIGAPGAQALGEAL----------AVNRTL 978

Query: 296  KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
            +V     N +   GAK LA   K   +L R+ + +N +   G   ++ A   N  L+H+N
Sbjct: 979  EVLDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAVCIATALSGNHGLQHIN 1038

Query: 356  LNDNTITYKG 365
            L  N I   G
Sbjct: 1039 LQGNHIGESG 1048


>gi|354545491|emb|CCE42219.1| hypothetical protein CPAR2_807680 [Candida parapsilosis]
          Length = 413

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   ++ +   +  S   +LE L L+NNG+G      +  +L    ++    
Sbjct: 110 INLSDNAFGLQTIDPIEAYI--SKAVSLEHLILSNNGMGPFAGSRIGGSLFKLAKAKAAA 167

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEEN 348
               +LK FI GRNRLEN     L    +    LE V + QNGI   GI+ L +     N
Sbjct: 168 KKSSSLKTFICGRNRLENGSVNYLVVGLRNHNDLEVVRLYQNGIRPAGISKLVEKGLSHN 227

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           K L+ L+L DNTIT  GAI L +++S  P L  LNL D LLK+ G+  + +  +
Sbjct: 228 KKLKVLDLQDNTITTSGAIKLAESISNWPDLVELNLNDSLLKNKGSLEVVRAFS 281



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           LE V + QNGI   GI+ L +     NKKL+ L+L DNTIT  GAI L +++S  P L  
Sbjct: 201 LEVVRLYQNGIRPAGISKLVEKGLSHNKKLKVLDLQDNTITTSGAIKLAESISNWPDLVE 260

Query: 71  LNLGDCLLKSAGASSIAKYLT 91
           LNL D LLK+ G+  + +  +
Sbjct: 261 LNLNDSLLKNKGSLEVVRAFS 281


>gi|154288128|ref|XP_001544859.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150408500|gb|EDN04041.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 464

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 115/236 (48%), Gaps = 19/236 (8%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG    + L + LR+     L  L LNNNGLG    +   +  ++        
Sbjct: 152 VDLSDNAFGVNTKDPLVEFLRAH--LPLRHLILNNNGLGPEAARSNPEIKYEIP------ 203

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITAL-SDAFEE 347
               AL+  + GRNRLE    +  A   K   K L  + M QNGIY  G+  L +     
Sbjct: 204 ----ALETIVCGRNRLEAGSMEAWARAIKANGKGLRTIRMKQNGIYSKGVVKLLNTGICH 259

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNT 405
              L   +L DNT   +G++ L   LS LPSL  L + DC L + G   +AK L+   NT
Sbjct: 260 APELEVFDLEDNTYGKEGSVALAAVLSGLPSLRELGVDDCALTAKGWLRVAKVLSAGGNT 319

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGVEEMEKLMK 458
            LE + L  NEI+ +G   LV   K     +K++ ++ N F E  E +  +++L+K
Sbjct: 320 KLEILKLKGNEINGKGVGALVHVAKTSLPAIKKVFLNANAFDEDNENIMRLQELLK 375



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K L  + M QNGIY  G+  L +       +L   +L DNT   +G++ L   LS LPSL
Sbjct: 232 KGLRTIRMKQNGIYSKGVVKLLNTGICHAPELEVFDLEDNTYGKEGSVALAAVLSGLPSL 291

Query: 69  AILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLK 125
             L + DC L + G   +AK L+   NT LE + L  NEI+ +G   LV   K     +K
Sbjct: 292 RELGVDDCALTAKGWLRVAKVLSAGGNTKLEILKLKGNEINGKGVGALVHVAKTSLPAIK 351

Query: 126 QINVSENQFGE--EGVEEMEKLMK 147
           ++ ++ N F E  E +  +++L+K
Sbjct: 352 KVFLNANAFDEDNENIMRLQELLK 375


>gi|254579435|ref|XP_002495703.1| ZYRO0C01012p [Zygosaccharomyces rouxii]
 gi|238938594|emb|CAR26770.1| ZYRO0C01012p [Zygosaccharomyces rouxii]
          Length = 402

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 132/245 (53%), Gaps = 16/245 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           RL  L+LSDNAFG   ++ L + + ++    L+ L L+NNGLG    + + KAL    ++
Sbjct: 109 RLEILNLSDNAFGLRTIDQLENYIANAVY--LKHLILSNNGLGPHAGERVGKALFMLAQN 166

Query: 286 SKK-EGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGI-TALS 342
            +K + +PL  + FI GRNRLEN  +  LA   K     L+ V + QNGI   G+ T L 
Sbjct: 167 KRKLKLNPL--ETFICGRNRLENGSSLYLALGLKSHGDGLQNVRLYQNGIRPKGVATILH 224

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYL 401
              + NKNL+ L+L DNT T   +  L + L     SL  LNL DCLLK  GA  + K  
Sbjct: 225 YGLKHNKNLKVLDLQDNTFTTTASSVLSEVLPIWKDSLVELNLNDCLLKQNGADLVFKVF 284

Query: 402 --TDNTTLEDVNLTCNEISVQGGLD--LVKAMKNK--TKLKQINVSENQFGEEGVEEMEK 455
             T  T LE +    NE+ VQ  L+  L+ A++ +   KLK++ ++ N   EE  E +++
Sbjct: 285 AETKFTKLEVLKAEYNEM-VQETLEQVLLPAVEKEQLPKLKKLELNGNWL-EENSEPLDQ 342

Query: 456 LMKSF 460
           L   F
Sbjct: 343 LQARF 347



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 10/146 (6%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L++V + QNGI   G+ T L    + NK L+ L+L DNT T   +  L + L     SL 
Sbjct: 204 LQNVRLYQNGIRPKGVATILHYGLKHNKNLKVLDLQDNTFTTTASSVLSEVLPIWKDSLV 263

Query: 70  ILNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLD--LVKAMKNK--TK 123
            LNL DCLLK  GA  + K    T  T LE +    NE+ VQ  L+  L+ A++ +   K
Sbjct: 264 ELNLNDCLLKQNGADLVFKVFAETKFTKLEVLKAEYNEM-VQETLEQVLLPAVEKEQLPK 322

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSF 149
           LK++ ++ N   EE  E +++L   F
Sbjct: 323 LKKLELNGNWL-EENSEPLDQLQARF 347


>gi|430812575|emb|CCJ30034.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 398

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 16/241 (6%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC----YESS- 286
           L+DNAFG   +E L+  L  S    L+ L LNNNGLG    + ++K+L       Y ++ 
Sbjct: 100 LNDNAFGSTAIEPLSSFL--SQHIPLQHLYLNNNGLGPIAGERVAKSLSSLAVKQYSNTH 157

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA-F 345
           +K G    ++  + GRNRLE+   K  A  F+    L+ + MPQNGI   GI  L ++  
Sbjct: 158 EKHGK---IETIVCGRNRLESGSMKAWAECFQAHTGLKYLRMPQNGIRPEGIRILLESGL 214

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
            +   L  L+L DNT+T  GA  L   L   P L  L + DCLL   G + +A+ L+  +
Sbjct: 215 SKCTQLEILDLQDNTLTLTGAKTLAAMLPNWPLLHELGISDCLLSGTGVALLAQVLSRGS 274

Query: 406 --TLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEG--VEEMEKLMKSF 460
              L+ + L  NEI  +    L  A+ K   +L+ + ++ N F ++   V++++ + +  
Sbjct: 275 HKQLKILRLQYNEIDHKTAEKLANAIDKTLPELEILELNGNMFSDQSDVVKKIQTIFRDR 334

Query: 461 G 461
           G
Sbjct: 335 G 335



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 8/191 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDA-FEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F+    L+++ MPQNGI   GI  L ++   +  +L  L+L DNT+T  GA  L  
Sbjct: 181 WAECFQAHTGLKYLRMPQNGIRPEGIRILLESGLSKCTQLEILDLQDNTLTLTGAKTLAA 240

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLDLVKAM 118
            L   P L  L + DCLL   G + +A+ L+  +   L+ + L  NEI  +    L  A+
Sbjct: 241 MLPNWPLLHELGISDCLLSGTGVALLAQVLSRGSHKQLKILRLQYNEIDHKTAEKLANAI 300

Query: 119 -KNKTKLKQINVSENQFGEEG--VEEMEKLMKSFGMAAALVLED-DEGECSDEEQDEESE 174
            K   +L+ + ++ N F ++   V++++ + +  G      L D DE   SD  +D + E
Sbjct: 301 DKTLPELEILELNGNMFSDQSDVVKKIQTIFRDRGKGKLDELNDMDEPSESDSLEDSDQE 360

Query: 175 EEND-SDAEGD 184
              D  D E D
Sbjct: 361 SSLDLKDIEKD 371


>gi|429859927|gb|ELA34683.1| ran gtpase activating protein 1 [Colletotrichum gloeosporioides
           Nara gc5]
          Length = 420

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 115/231 (49%), Gaps = 10/231 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      +   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 96  KLNTINLNDNAFGINTQAPVVAFL--AAHVPLQHLYLNNNGLGPHAGILVADALSELHAK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
            E+++KEG  +  L+  I GRNRLEN   +  A  F     ++ ++M QNGI   GI+ L
Sbjct: 154 KEAARKEGKEVPDLETVICGRNRLENGSMQAWAKAFSLHNKIKEIKMVQNGIRQEGISHL 213

Query: 342 -SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            S+       LR L+L DNT T  GA  +   L     L  L L D  L + G + +AK 
Sbjct: 214 ISEGLNHATELRILDLQDNTFTLSGAKAVASVLPNWAHLQELGLNDAYLTAKGTALVAKA 273

Query: 401 LT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
           L   +   LE + L  N+I+ +    +  A  +    LK++ ++ N+F EE
Sbjct: 274 LAKGNQDKLEILRLQFNDITAKALTGIASAATDSLPALKKVELNGNKFEEE 324



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F     ++ ++M QNGI   GI+ L S+      +LR L+L DNT T  GA  +  
Sbjct: 185 WAKAFSLHNKIKEIKMVQNGIRQEGISHLISEGLNHATELRILDLQDNTFTLSGAKAVAS 244

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM 118
            L     L  L L D  L + G + +AK L   +   LE + L  N+I+ +    +  A 
Sbjct: 245 VLPNWAHLQELGLNDAYLTAKGTALVAKALAKGNQDKLEILRLQFNDITAKALTGIASAA 304

Query: 119 KNK-TKLKQINVSENQFGEE 137
            +    LK++ ++ N+F EE
Sbjct: 305 TDSLPALKKVELNGNKFEEE 324


>gi|430814393|emb|CCJ28355.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 360

 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 16/241 (6%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC----YESS- 286
           L+DNAFG   +E L+  L       L+ L LNNNGLG    + ++K+L       Y ++ 
Sbjct: 62  LNDNAFGSTAIEPLSSFLSQH--IPLQHLYLNNNGLGPIAGERVAKSLSSLAVKQYSNTH 119

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA-F 345
           +K G    ++  + GRNRLE+   K  A  F+    L+ + MPQNGI   GI  L ++  
Sbjct: 120 EKHGK---IETIVCGRNRLESGSMKAWAECFQAHTGLKYLRMPQNGIRPEGIRILLESGL 176

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
            +   L  L+L DNT+T  GA  L   L   P L  L + DCLL   G + +A+ L+  +
Sbjct: 177 SKCTQLEILDLQDNTLTLTGAKTLAAMLPNWPLLHELGISDCLLSGTGVALLAQVLSRGS 236

Query: 406 --TLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEG--VEEMEKLMKSF 460
              L+ + L  NEI  +    L  A+ K   +L+ + ++ N F ++   V++++ + +  
Sbjct: 237 HKQLKILRLQYNEIDHKTAEKLANAIDKTLPELEILELNGNMFSDQSDVVKKIQTIFRDR 296

Query: 461 G 461
           G
Sbjct: 297 G 297



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 8/191 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDA-FEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F+    L+++ MPQNGI   GI  L ++   +  +L  L+L DNT+T  GA  L  
Sbjct: 143 WAECFQAHTGLKYLRMPQNGIRPEGIRILLESGLSKCTQLEILDLQDNTLTLTGAKTLAA 202

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLDLVKAM 118
            L   P L  L + DCLL   G + +A+ L+  +   L+ + L  NEI  +    L  A+
Sbjct: 203 MLPNWPLLHELGISDCLLSGTGVALLAQVLSRGSHKQLKILRLQYNEIDHKTAEKLANAI 262

Query: 119 -KNKTKLKQINVSENQFGEEG--VEEMEKLMKSFGMAAALVLED-DEGECSDEEQDEESE 174
            K   +L+ + ++ N F ++   V++++ + +  G      L D DE   SD  +D + E
Sbjct: 263 DKTLPELEILELNGNMFSDQSDVVKKIQTIFRDRGKGKLDELNDMDEPSESDSLEDSDQE 322

Query: 175 EEND-SDAEGD 184
              D  D E D
Sbjct: 323 SSLDLKDIEKD 333


>gi|398412000|ref|XP_003857332.1| hypothetical protein MYCGRDRAFT_66253 [Zymoseptoria tritici IPO323]
 gi|339477217|gb|EGP92308.1| hypothetical protein MYCGRDRAFT_66253 [Zymoseptoria tritici IPO323]
          Length = 422

 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 120/245 (48%), Gaps = 22/245 (8%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE---SS 286
           ++L+DNAFG   VE L   L  S    L+ L LNNNGLG     L+++AL    E   ++
Sbjct: 98  VNLNDNAFGLNTVEPLRPFL--SKHTPLQHLYLNNNGLGPAAGTLVAQALEQLAEYKAAA 155

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI-TALSDA 344
           +KEG  +  L+  I GRNRLE          +     ++ V+M QNGI   GI T L   
Sbjct: 156 RKEGKEVPDLETVICGRNRLETGSMAAWVKAYTANNKVKTVKMVQNGIRQEGIATLLQHG 215

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD- 403
                 L  L+L DNT T   A  L   +     L  L +GDCLL + G   + + L   
Sbjct: 216 LSNCAVLETLDLQDNTFTSLAAKTLSTVVPSWAELKELAVGDCLLSARGGRMLGEALAKA 275

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKT-------KLKQINVSENQFGEE--GVEEM 453
            N  LE + L  NEI  +G    +KA+ +         +L+++ ++ N+F EE   +E +
Sbjct: 276 GNKKLEILRLQYNEIDTKG----LKAISDAANAESALPRLRRVELNGNKFAEEDASIEAL 331

Query: 454 EKLMK 458
           +K+++
Sbjct: 332 QKVLE 336



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 43/193 (22%)

Query: 8   KLKTLEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+KT   V+M QNGI   GI T L         L  L+L DNT T   A  L   +    
Sbjct: 192 KVKT---VKMVQNGIRQEGIATLLQHGLSNCAVLETLDLQDNTFTSLAAKTLSTVVPSWA 248

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKT-- 122
            L  L +GDCLL + G   + + L    N  LE + L  NEI  +G    +KA+ +    
Sbjct: 249 ELKELAVGDCLLSARGGRMLGEALAKAGNKKLEILRLQYNEIDTKG----LKAISDAANA 304

Query: 123 -----KLKQINVSENQFGEE--GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEE 175
                +L+++ ++ N+F EE   +E ++K++                   ++ +DE++EE
Sbjct: 305 ESALPRLRRVELNGNKFAEEDASIEALQKVL-------------------EKRKDEQAEE 345

Query: 176 -----ENDSDAEG 183
                E+D DA G
Sbjct: 346 YPGVDEDDEDAWG 358


>gi|366991351|ref|XP_003675441.1| hypothetical protein NCAS_0C00840 [Naumovozyma castellii CBS 4309]
 gi|342301306|emb|CCC69074.1| hypothetical protein NCAS_0C00840 [Naumovozyma castellii CBS 4309]
          Length = 406

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 126/249 (50%), Gaps = 14/249 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L T   L  L+LSDNAFG   +E L   +  +    L+ L L+NNG+G    + + KAL 
Sbjct: 104 LLTCPHLEILNLSDNAFGLRTIESLESYIAQAV--HLKHLILSNNGMGPFAGERIGKALF 161

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGIT 339
              E  K +  P+ L+ FI GRNRLEN  +  LA   K     L+ V++ QNGI   GI 
Sbjct: 162 KLAELKKTQKKPM-LETFICGRNRLENGSSLYLALGLKNHGDGLKVVKLYQNGIRPRGIM 220

Query: 340 -ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSI 397
             L    + NK L  L+L DNT T   +  L + L +   SL  LNL DCLLK  GA  +
Sbjct: 221 NLLHYGLQYNKKLEVLDLQDNTFTETASTLLTEYLPQWQNSLVELNLNDCLLKGKGADKV 280

Query: 398 AKYLTDNT--TLEDVNLTCNEISVQGGLD--LVKAMKNK--TKLKQINVSENQFGEEGVE 451
            K   D     L+ + L  NEI  Q  ++  L+ A++N    KL+ + ++ N+  E+  E
Sbjct: 281 FKVFQDYKFENLQRLKLEYNEIE-QDTIEERLIPALENDHFPKLQILELNGNRLDEDS-E 338

Query: 452 EMEKLMKSF 460
            ++ L   F
Sbjct: 339 ALDVLQARF 347



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 10/146 (6%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   GI   L    + NKKL  L+L DNT T   +  L + L +   SL 
Sbjct: 204 LKVVKLYQNGIRPRGIMNLLHYGLQYNKKLEVLDLQDNTFTETASTLLTEYLPQWQNSLV 263

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLD--LVKAMKNK--TK 123
            LNL DCLLK  GA  + K   D     L+ + L  NEI  Q  ++  L+ A++N    K
Sbjct: 264 ELNLNDCLLKGKGADKVFKVFQDYKFENLQRLKLEYNEIE-QDTIEERLIPALENDHFPK 322

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSF 149
           L+ + ++ N+  E+  E ++ L   F
Sbjct: 323 LQILELNGNRLDEDS-EALDVLQARF 347


>gi|326434106|gb|EGD79676.1| hypothetical protein PTSG_10661 [Salpingoeca sp. ATCC 50818]
          Length = 1538

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 14/213 (6%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL-HDCYESSKKEG 290
           L++   G IG   +A+ L+ + C  L+ L L+NN +G  G   L++ L H+         
Sbjct: 43  LNNARLGVIGARAVAEALKDNTC--LKRLYLHNNSIGPEGAVALAEMLKHNT-------- 92

Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
              AL     G N +  +GA +LA + K    L  + +  N I   G  AL++  E N  
Sbjct: 93  ---ALTWLSLGDNSIGGQGAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTT 149

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           L  L+L DN+I  +GA+ L + L    +L  LNL D  +   GA ++AK L  NTTLE +
Sbjct: 150 LETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEIL 209

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           NLT N I+  GG  L  A+     LK++N+  N
Sbjct: 210 NLTKNSITPVGGAALGAALDQNRTLKKLNIERN 242



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 87/155 (56%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           RL   GA+ +A   K    L+R+ +  N I   G  AL++  + N  L  L+L DN+I  
Sbjct: 47  RLGVIGARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGG 106

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
           +GA+ L + L    +L  L+L +  +   GA ++A+ L  NTTLE ++L  N I  +G +
Sbjct: 107 QGAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAV 166

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L + +K+ T L+++N+ +N  G+EG   + K++K
Sbjct: 167 ALAEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLK 201



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 14/190 (7%)

Query: 262 LNNNGLGITGCKLLSKALHD--CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           LNN  LG+ G + +++AL D  C            LK      N +  EGA  LA + K 
Sbjct: 43  LNNARLGVIGARAVAEALKDNTC------------LKRLYLHNNSIGPEGAVALAEMLKH 90

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N I   G   L++  + N  L  L+L +N+I  +GA+ L + L    +L
Sbjct: 91  NTALTWLSLGDNSIGGQGAVVLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTL 150

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
             L+L D  +   GA ++A+ L  NTTLE +NL  N I  +G + L K +K+ T L+ +N
Sbjct: 151 ETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEILN 210

Query: 440 VSENQFGEEG 449
           +++N     G
Sbjct: 211 LTKNSITPVG 220



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 33/216 (15%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA + K    L  + +  N I   G  AL++  E N  L  L+L DN+I  +GA+ L +
Sbjct: 111 VLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAE 170

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L    +L  LNL D  +   GA ++AK L  NTTLE +NLT N I+  GG  L  A+  
Sbjct: 171 MLKHNTTLEKLNLWDNSIGDEGAVALAKVLKHNTTLEILNLTKNSITPVGGAALGAALDQ 230

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE--------DDEGECSDEEQDEE 172
              LK++N+  N              ++FG A  +  E        DDEG  + +E  +E
Sbjct: 231 NRTLKKLNIERNSTATA---------RAFGAALPVDRELITGDWFGDDEGNAAFDEARKE 281

Query: 173 SEEEN---------DSDA-------EGDNSNLSHND 192
            +  +         D DA       E DN++++  D
Sbjct: 282 KKRRHHEQLFAACRDGDAPAVTSLIEQDNADINQQD 317



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 78/136 (57%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N I   G  AL++  + N  L  L+L DN+I  +GA+ L + L    +L  L
Sbjct: 66  LKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNTALTWL 125

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L +  +   GA ++A+ L  NTTLE ++L  N I  +G + L + +K+ T L+++N+ +
Sbjct: 126 SLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWD 185

Query: 132 NQFGEEGVEEMEKLMK 147
           N  G+EG   + K++K
Sbjct: 186 NSIGDEGAVALAKVLK 201



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 73/123 (59%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           +G  A+++A ++N  L+ L L++N+I  +GA+ L + L    +L  L+LGD  +   GA 
Sbjct: 51  IGARAVAEALKDNTCLKRLYLHNNSIGPEGAVALAEMLKHNTALTWLSLGDNSIGGQGAV 110

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            +A+ L  NT L  ++L  N I  +G + L + +++ T L+ +++ +N  G+EG   + +
Sbjct: 111 VLAEMLKHNTALTWLSLYNNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAE 170

Query: 145 LMK 147
           ++K
Sbjct: 171 MLK 173



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 25/192 (13%)

Query: 204 HNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLN 263
           HNNS         + M LK    L  L L DN+ G  G   LA++L+ +   AL  L L 
Sbjct: 72  HNNSIGPEGAVALAEM-LKHNTALTWLSLGDNSIGGQGAVVLAEMLKHNT--ALTWLSLY 128

Query: 264 NNGLGITGCKLLSKALH--------DCYESSKKEGSPLALKVFIAGRNRLE--------- 306
           NN +G  G   L++ L         D +++S  +   +AL   +     LE         
Sbjct: 129 NNSIGDEGAVALAEMLEHNTTLETLDLWDNSIGDEGAVALAEMLKHNTTLEKLNLWDNSI 188

Query: 307 -NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI---- 361
            +EGA  LA V K   TLE + + +N I  VG  AL  A ++N+ L+ LN+  N+     
Sbjct: 189 GDEGAVALAKVLKHNTTLEILNLTKNSITPVGGAALGAALDQNRTLKKLNIERNSTATAR 248

Query: 362 TYKGAIPLGQAL 373
            +  A+P+ + L
Sbjct: 249 AFGAALPVDREL 260


>gi|6323891|ref|NP_013962.1| Rna1p [Saccharomyces cerevisiae S288c]
 gi|133146|sp|P11745.2|RNA1_YEAST RecName: Full=Ran GTPase-activating protein 1; AltName:
           Full=Protein involved in RNA production/processing
 gi|172430|gb|AAA34983.1| RNA1 protein (put.); putative [Saccharomyces cerevisiae]
 gi|887616|emb|CAA90206.1| Rna1p [Saccharomyces cerevisiae]
 gi|190408462|gb|EDV11727.1| GTPase activating protein for Gsp1p [Saccharomyces cerevisiae
           RM11-1a]
 gi|207342141|gb|EDZ69999.1| YMR235Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271607|gb|EEU06649.1| Rna1p [Saccharomyces cerevisiae JAY291]
 gi|259148821|emb|CAY82066.1| Rna1p [Saccharomyces cerevisiae EC1118]
 gi|285814240|tpg|DAA10135.1| TPA: Rna1p [Saccharomyces cerevisiae S288c]
 gi|323347046|gb|EGA81322.1| Rna1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323353175|gb|EGA85475.1| Rna1p [Saccharomyces cerevisiae VL3]
 gi|365763941|gb|EHN05467.1| Rna1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392297405|gb|EIW08505.1| Rna1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 407

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 98/177 (55%), Gaps = 6/177 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   +E L D +  +    ++ L L+NNG+G    + + KAL    ++ K  
Sbjct: 113 VNLSDNAFGLRTIELLEDYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ FI GRNRLEN  A  LA   K   + L+ V++ QNGI   G+ T +    + 
Sbjct: 171 SKPF-LETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTD 403
            KNL  L+L DNT T   ++ L +AL     SL  LNL DCLLK+AG+  + K  T+
Sbjct: 230 LKNLEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFTE 286



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L  L+L DNT T   ++ L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTWKDSLF 263

Query: 70  ILNLGDCLLKSAGASSIAKYLTD 92
            LNL DCLLK+AG+  + K  T+
Sbjct: 264 ELNLNDCLLKTAGSDEVFKVFTE 286


>gi|320166278|gb|EFW43177.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 587

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 185/402 (46%), Gaps = 40/402 (9%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L+LN+  I    A  + +AL K+ +L  L L        GA +IA+ L  NTTL  +NL 
Sbjct: 22  LDLNEERIDDVEAQAIAEAL-KVNTLTWLKL------DLGAQAIAEALKVNTTLTYLNLD 74

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEG 162
            N+I   G   L +A+K  T L  + ++++Q GE G + + + +K       L       
Sbjct: 75  GNQIGDAGAKVLAEALKGHTTLTGLGLNKSQIGEVGAQAIGEALKVNSTLTML------- 127

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSL 221
                  D ++ +  D+ A+     L  N +    N       + NQ  +   Q+   +L
Sbjct: 128 -------DLDANQIGDAGAQAIAEALKVNTTLTWLNL------DGNQIGDAGAQAIAQAL 174

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
           K  + L +L L  N  G  G + + + L+ +    L +L L+ N +G  G K+  +AL  
Sbjct: 175 KVNSTLKKLFLDANQIGDAGAQAIGEALKVNK--RLIDLSLDGNQIGDAGAKVFGEAL-- 230

Query: 282 CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
                 K  S L +    A  N++ + GA+ +A   K   TL+++ +  N I   G  A+
Sbjct: 231 ------KVNSTLTMLDLDA--NQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAI 282

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
            +A + NK L  L L++N I   GA  +  AL    +L  LNLG+  + + GA +IA+ L
Sbjct: 283 GEALKVNKRLIDLRLSENHIGDAGANTIAAALKVNTTLTWLNLGENQIGNVGAEAIAEAL 342

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
             NTTL  + L  NEI   G   L  A++  T + ++ +  N
Sbjct: 343 KVNTTLTVLGLHTNEIGDDGACALADALEVNTTMTKLLLDRN 384



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 163/363 (44%), Gaps = 33/363 (9%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL ++ +  N I   G   L++A + +  L  L LN + I   GA  +G+A
Sbjct: 58  IAEALKVNTTLTYLNLDGNQIGDAGAKVLAEALKGHTTLTGLGLNKSQIGEVGAQAIGEA 117

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L +L+L    +  AGA +IA+ L  NTTL  +NL  N+I   G   + +A+K  
Sbjct: 118 LKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVN 177

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           + LK++ +  NQ G+ G + + + +K       L L        D  Q  ++  +   +A
Sbjct: 178 STLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLSL--------DGNQIGDAGAKVFGEA 229

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPI 240
              NS L+  D             ++NQ  +   Q+   +LK  + L +L L  N  G  
Sbjct: 230 LKVNSTLTMLDL------------DANQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDA 277

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G + + + L+ +    L +L+L+ N +G  G   ++ AL               L     
Sbjct: 278 GAQAIGEALKVNK--RLIDLRLSENHIGDAGANTIAAALK----------VNTTLTWLNL 325

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           G N++ N GA+ +A   K   TL  + +  N I   G  AL+DA E N  +  L L+ N 
Sbjct: 326 GENQIGNVGAEAIAEALKVNTTLTVLGLHTNEIGDDGACALADALEVNTTMTKLLLDRNC 385

Query: 361 ITY 363
           +TY
Sbjct: 386 MTY 388



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK  + L  LDL  N  G  G + +A+ L+ +    L  L L+ N +G  G + +++AL
Sbjct: 117 ALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTT--LTWLNLDGNQIGDAGAQAIAQAL 174

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  S L  K+F+   N++ + GA+ +    K  K L  + +  N I   G  
Sbjct: 175 --------KVNSTLK-KLFLDA-NQIGDAGAQAIGEALKVNKRLIDLSLDGNQIGDAGAK 224

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
              +A + N  L  L+L+ N I   GA  + QAL    +L  L L    +  AGA +I +
Sbjct: 225 VFGEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGE 284

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N  L D+ L+ N I   G   +  A+K  T L  +N+ ENQ G  G E + + +K
Sbjct: 285 ALKVNKRLIDLRLSENHIGDAGANTIAAALKVNTTLTWLNLGENQIGNVGAEAIAEALK 343



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 115/239 (48%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L L+ +  G +G + + + L+ +    +  L L+ N +G  G + +++AL
Sbjct: 89  ALKGHTTLTGLGLNKSQIGEVGAQAIGEALKVNSTLTM--LDLDANQIGDAGAQAIAEAL 146

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                          L       N++ + GA+ +A   K   TL+++ +  N I   G  
Sbjct: 147 K----------VNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQ 196

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+ +A + NK L  L+L+ N I   GA   G+AL    +L +L+L    +  AGA +IA+
Sbjct: 197 AIGEALKVNKRLIDLSLDGNQIGDAGAKVFGEALKVNSTLTMLDLDANQIGDAGAQAIAQ 256

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N+TL+ + L  N+I   G   + +A+K   +L  + +SEN  G+ G   +   +K
Sbjct: 257 ALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLRLSENHIGDAGANTIAAALK 315



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 83/156 (53%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GAK+LA   K   TL  + + ++ I  VG  A+ +A + N  L  L+L+ N I 
Sbjct: 76  NQIGDAGAKVLAEALKGHTTLTGLGLNKSQIGEVGAQAIGEALKVNSTLTMLDLDANQIG 135

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL    +L  LNL    +  AGA +IA+ L  N+TL+ + L  N+I   G 
Sbjct: 136 DAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGA 195

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A+K   +L  +++  NQ G+ G +   + +K
Sbjct: 196 QAIGEALKVNKRLIDLSLDGNQIGDAGAKVFGEALK 231



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 79/150 (52%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA+ +A   K   TL  + +  N I   G   L++A + +  L  L LN + I   GA  
Sbjct: 54  GAQAIAEALKVNTTLTYLNLDGNQIGDAGAKVLAEALKGHTTLTGLGLNKSQIGEVGAQA 113

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           +G+AL    +L +L+L    +  AGA +IA+ L  NTTL  +NL  N+I   G   + +A
Sbjct: 114 IGEALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGNQIGDAGAQAIAQA 173

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +K  + LK++ +  NQ G+ G + + + +K
Sbjct: 174 LKVNSTLKKLFLDANQIGDAGAQAIGEALK 203



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 12/219 (5%)

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
           +G + +A+ L+ +    L  L L+ N +G  G K+L++AL       K   +   L +  
Sbjct: 53  LGAQAIAEALKVNTT--LTYLNLDGNQIGDAGAKVLAEAL-------KGHTTLTGLGL-- 101

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
             ++++   GA+ +    K   TL  +++  N I   G  A+++A + N  L  LNL+ N
Sbjct: 102 -NKSQIGEVGAQAIGEALKVNSTLTMLDLDANQIGDAGAQAIAEALKVNTTLTWLNLDGN 160

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            I   GA  + QAL    +L  L L    +  AGA +I + L  N  L D++L  N+I  
Sbjct: 161 QIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLSLDGNQIGD 220

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            G     +A+K  + L  +++  NQ G+ G + + + +K
Sbjct: 221 AGAKVFGEALKVNSTLTMLDLDANQIGDAGAQAIAQALK 259


>gi|151945940|gb|EDN64172.1| GTPase-activating protein [Saccharomyces cerevisiae YJM789]
          Length = 412

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 6/176 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   +E L D +  +    ++ L L+NNG+G    + + KAL    ++ K  
Sbjct: 113 VNLSDNAFGLRTIELLEDYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ FI GRNRLEN  A  LA   K   + L+ V++ QNGI   G+ T +    + 
Sbjct: 171 SKPF-LETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
            KNL  L+L DNT T   ++ L +AL     SL  LNL DCLLK+AG+  + K  T
Sbjct: 230 LKNLEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFT 285



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L  L+L DNT T   ++ L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTWKDSLF 263

Query: 70  ILNLGDCLLKSAGASSIAKYLT 91
            LNL DCLLK+AG+  + K  T
Sbjct: 264 ELNLNDCLLKTAGSDEVFKVFT 285


>gi|452819845|gb|EME26896.1| RAN GTPase-activating protein 1 [Galdieria sulphuraria]
          Length = 462

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 10/235 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L ELDLSDNA G  G+E    +LR      L+ ++  NNGL     +LL   L +    
Sbjct: 104 QLYELDLSDNALGAKGIEACKKILRQQK--KLQVIRFCNNGLAADAIQLLVSYLLE---- 157

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
               G P +LK      N +E+EGAK +  + +    LE +++    +   GI  +  A 
Sbjct: 158 ---GGGPTSLKTIHFFNNLMESEGAKNVVPLLEFSPELEDLKLASLRVGEEGIEPVIRAL 214

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDN 404
           +    LR L+L+DN +  +GA  LG+    L +L  L L D  L   GA++I + L    
Sbjct: 215 KNTTLLRVLDLSDNILANRGANCLGRMFPLLSNLETLILRDTSLGDKGATTILQCLERSE 274

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             L+ ++++CNE++ +   +L K ++ +T L+++ V EN  G +GV  + K + S
Sbjct: 275 IRLKVLDISCNELTAESCKNLAKLVEQQTCLERLLVEENDIGSKGVAMLAKALSS 329



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 1/138 (0%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE +++    +   GI  +  A +    LR L+L+DN +  +GA  LG+    L +L  L
Sbjct: 192 LEDLKLASLRVGEEGIEPVIRALKNTTLLRVLDLSDNILANRGANCLGRMFPLLSNLETL 251

Query: 72  NLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L D  L   GA++I + L      L+ ++++CNE++ +   +L K ++ +T L+++ V 
Sbjct: 252 ILRDTSLGDKGATTILQCLERSEIRLKVLDISCNELTAESCKNLAKLVEQQTCLERLLVE 311

Query: 131 ENQFGEEGVEEMEKLMKS 148
           EN  G +GV  + K + S
Sbjct: 312 ENDIGSKGVAMLAKALSS 329



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 137/359 (38%), Gaps = 73/359 (20%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK---LPSL 68
           L  +++  N +   GI A      + KKL+ +   +N +       L   L +     SL
Sbjct: 105 LYELDLSDNALGAKGIEACKKILRQQKKLQVIRFCNNGLAADAIQLLVSYLLEGGGPTSL 164

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             ++  + L++S GA ++   L  +  LED+ L    +  +G   +++A+KN T L+ ++
Sbjct: 165 KTIHFFNNLMESEGAKNVVPLLEFSPELEDLKLASLRVGEEGIEPVIRALKNTTLLRVLD 224

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLED----DEGECSDEEQDEESEEENDSDAEGD 184
           +S+N     G   + ++         L+L D    D+G  +  +  E SE          
Sbjct: 225 LSDNILANRGANCLGRMFPLLSNLETLILRDTSLGDKGATTILQCLERSE---------- 274

Query: 185 NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEG 244
                                                    RL  LD+S N       + 
Sbjct: 275 ----------------------------------------IRLKVLDISCNELTAESCKN 294

Query: 245 LADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNR 304
           LA L+    C  LE L +  N +G  G  +L+KAL     SS      + L +     N 
Sbjct: 295 LAKLVEQQTC--LERLLVEENDIGSKGVAMLAKAL-----SSGAHSRLVELNL---AENS 344

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           +   GAK L +V  KL +L  V +  N I  V +  L DA      L  +N  + T+++
Sbjct: 345 IGTAGAKALFSVLIKLVSLRNVNLSGNWIKQVVVEELEDA------LSQINRTELTVSF 397



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 74/173 (42%), Gaps = 13/173 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  LDLSDN     G   L  +        LE L L +  LG  G   + + L
Sbjct: 213 ALKNTTLLRVLDLSDNILANRGANCLGRMF--PLLSNLETLILRDTSLGDKGATTILQCL 270

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                    E S + LKV     N L  E  K LA + ++   LER+ + +N I   G+ 
Sbjct: 271 ---------ERSEIRLKVLDISCNELTAESCKNLAKLVEQQTCLERLLVEENDIGSKGVA 321

Query: 340 ALSDAFEENKNLR--HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
            L+ A     + R   LNL +N+I   GA  L   L KL SL  +NL    +K
Sbjct: 322 MLAKALSSGAHSRLVELNLAENSIGTAGAKALFSVLIKLVSLRNVNLSGNWIK 374



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 7/177 (3%)

Query: 299 IAGRNRLENEGAKMLAAVFKKLKT--LERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           IAGR   E EG  +L  +   L++  L  +++  N +   GI A      + K L+ +  
Sbjct: 81  IAGRK--EEEGHGVLRVLSSSLESDQLYELDLSDNALGAKGIEACKKILRQQKKLQVIRF 138

Query: 357 NDNTITYKGAIPLGQALSK---LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
            +N +       L   L +     SL  ++  + L++S GA ++   L  +  LED+ L 
Sbjct: 139 CNNGLAADAIQLLVSYLLEGGGPTSLKTIHFFNNLMESEGAKNVVPLLEFSPELEDLKLA 198

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
              +  +G   +++A+KN T L+ +++S+N     G   + ++         L+L D
Sbjct: 199 SLRVGEEGIEPVIRALKNTTLLRVLDLSDNILANRGANCLGRMFPLLSNLETLILRD 255


>gi|349580526|dbj|GAA25686.1| K7_Rna1p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 407

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 6/176 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   +E L D +  +    ++ L L+NNG+G    + + KAL    ++ K  
Sbjct: 113 VNLSDNAFGLRTIELLEDYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ FI GRNRLEN  A  LA   K   + L+ V++ QNGI   G+ T +    + 
Sbjct: 171 SKPF-LETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
            KNL  L+L DNT T   ++ L +AL     SL  LNL DCLLK+AG+  + K  T
Sbjct: 230 LKNLEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFT 285



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L  L+L DNT T   ++ L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTWKDSLF 263

Query: 70  ILNLGDCLLKSAGASSIAKYLT 91
            LNL DCLLK+AG+  + K  T
Sbjct: 264 ELNLNDCLLKTAGSDEVFKVFT 285


>gi|389740565|gb|EIM81756.1| RNI-like protein [Stereum hirsutum FP-91666 SS1]
          Length = 410

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 89/160 (55%), Gaps = 2/160 (1%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L+LSDNAFG   V+ +  +L  S   +L  L LNNNGLG  G   ++ AL    +++K+E
Sbjct: 96  LNLSDNAFGGRSVDPITPILSQS--SSLSTLLLNNNGLGPAGGSEIAFALLRRAQTAKQE 153

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
           G P  L+  + GRNRLE+  A   A  FK+   L  V MPQNGI   GI  L++      
Sbjct: 154 GKPSKLRKVVCGRNRLEDGSAPKWAEAFKEHGGLVEVRMPQNGIRMDGIVKLAEGLGACP 213

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 389
           +L  L+L DNT   +G     +AL KLP L  LN  DC+L
Sbjct: 214 DLEVLDLQDNTFGVEGDKAFSEALPKLPKLKFLNFSDCVL 253



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 39/77 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A  FK+   L  V MPQNGI   GI  L++       L  L+L DNT   +G     +A
Sbjct: 177 WAEAFKEHGGLVEVRMPQNGIRMDGIVKLAEGLGACPDLEVLDLQDNTFGVEGDKAFSEA 236

Query: 62  LSKLPSLAILNLGDCLL 78
           L KLP L  LN  DC+L
Sbjct: 237 LPKLPKLKFLNFSDCVL 253


>gi|116181556|ref|XP_001220627.1| hypothetical protein CHGG_01406 [Chaetomium globosum CBS 148.51]
 gi|88185703|gb|EAQ93171.1| hypothetical protein CHGG_01406 [Chaetomium globosum CBS 148.51]
          Length = 420

 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 112/226 (49%), Gaps = 9/226 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDCYESS 286
           ++L+DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H   E +
Sbjct: 101 INLNDNAFGLNTQAPLVTFL--AAHVPLQHLYLNNNGLGPHAGILIADALSELHGKKEEA 158

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
           +K G  +  L+  I GRNRLEN      A  FK    ++ ++M QNGI   GI+  LS+ 
Sbjct: 159 RKNGQQVPNLETVICGRNRLENGSMAAWAKAFKLHNKIKEIKMVQNGIRQEGISHLLSEG 218

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL--T 402
                 L  L+L DNT T  GA  L         L  L +GD LL + G   +A+ L   
Sbjct: 219 LRHTSQLEVLDLQDNTFTLLGAKALAAVAPGWAELIELGIGDSLLGAKGGVLLAQSLGKG 278

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
            NT L+ + L  NEI+  G   L +A +    LK++ ++ N+F E+
Sbjct: 279 KNTKLKILRLQYNEITASGVKALAEAAEALPVLKKLELNGNKFTED 324



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 7/168 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  FK    ++ ++M QNGI   GI+  LS+      +L  L+L DNT T  GA  L  
Sbjct: 186 WAKAFKLHNKIKEIKMVQNGIRQEGISHLLSEGLRHTSQLEVLDLQDNTFTLLGAKALAA 245

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVKAM 118
                  L  L +GD LL + G   +A+ L    NT L+ + L  NEI+  G   L +A 
Sbjct: 246 VAPGWAELIELGIGDSLLGAKGGVLLAQSLGKGKNTKLKILRLQYNEITASGVKALAEAA 305

Query: 119 KNKTKLKQINVSENQFGE--EGVEEMEKLMKSF--GMAAALVLEDDEG 162
           +    LK++ ++ N+F E  E +  ++ L ++     A  ++ ED+ G
Sbjct: 306 EALPVLKKLELNGNKFTEDDESIIALQDLFEARKEKQAGDIIFEDEWG 353


>gi|351700213|gb|EHB03132.1| Protein NLRC3 [Heterocephalus glaber]
          Length = 737

 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 121/250 (48%), Gaps = 12/250 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N  GP G +GLAD L+ +    L  L L  N +G  G + +++AL
Sbjct: 389 SLLVNRSLTTLDLRSNTIGPQGAKGLADALKIN--RTLTSLSLQKNSIGPLGAQKMAEAL 446

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K+  S   LK  +   N + + GAK LA   K  + L  +++  N I   G+ 
Sbjct: 447 -------KQNKS---LKELMLSSNSIGDGGAKALAEALKVNQGLLSLDLQSNSISDAGLA 496

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL  A   N+ L  LNL +N+I+ KGA  L  ALS   +L  L+L   LL   GA +IA 
Sbjct: 497 ALMGALCANQTLLSLNLRENSISPKGAQALAHALSSNTTLKHLDLTANLLYDQGAQAIAV 556

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            + +N  L+ ++L  N I V     L +A++  + L  +++ EN   +EG   +   +K 
Sbjct: 557 AMRENCALKSLHLQWNFIQVDAARALGQALQLNSSLTSLDLQENAIRDEGASALATALKV 616

Query: 460 FGMAAALVLE 469
                AL L+
Sbjct: 617 NTALTALYLQ 626



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 184/422 (43%), Gaps = 61/422 (14%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
           +++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA  +A  L  N TL  
Sbjct: 367 RIQKISLAENQISNKGAKALARSLLVNRSLTTLDLRSNTIGPQGAKGLADALKINRTLTS 426

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           ++L  N I   G   + +A+K    LK++ +S N  G+ G + + + +K           
Sbjct: 427 LSLQKNSIGPLGAQKMAEALKQNKSLKELMLSSNSIGDGGAKALAEALKV---------- 476

Query: 159 DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
            ++G  S    D +S   +D+        L  N +                         
Sbjct: 477 -NQGLLS---LDLQSNSISDAGLAALMGALCANQT------------------------- 507

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
                   L+ L+L +N+  P G + LA  L S+    L+ L L  N L   G + ++ A
Sbjct: 508 --------LLSLNLRENSISPKGAQALAHALSSNT--TLKHLDLTANLLYDQGAQAIAVA 557

Query: 279 LHD-CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           + + C           ALK      N ++ + A+ L    +   +L  +++ +N I   G
Sbjct: 558 MRENC-----------ALKSLHLQWNFIQVDAARALGQALQLNSSLTSLDLQENAIRDEG 606

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
            +AL+ A + N  L  L L   +I   GA+ LG+AL+   +L IL+L    +  +GA ++
Sbjct: 607 ASALATALKVNTALTALYLQVASIGAPGALALGEALAVNRTLEILDLRGNAIGVSGAKAL 666

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           A  L  N++L  ++L  N + + G + +  A+     L+ IN+  N  GE G   + + +
Sbjct: 667 ANALKVNSSLRRLSLQENSLGMDGVIGVAMALSGNHGLQHINLQGNHIGESGARMISEAI 726

Query: 458 KS 459
           K+
Sbjct: 727 KT 728



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 150/372 (40%), Gaps = 59/372 (15%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL  + + +N I  +G   +++A ++NK L+ L L+ N+I   GA  L +A
Sbjct: 414 LADALKINRTLTSLSLQKNSIGPLGAQKMAEALKQNKSLKELMLSSNSIGDGGAKALAEA 473

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L    +  AG +++   L  N TL  +NL  N IS +G   L  A+ + 
Sbjct: 474 LKVNQGLLSLDLQSNSISDAGLAALMGALCANQTLLSLNLRENSISPKGAQALAHALSSN 533

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           T LK ++++ N   ++G + +   M+      +L L+ +  +        ++ + N S  
Sbjct: 534 TTLKHLDLTANLLYDQGAQAIAVAMRENCALKSLHLQWNFIQVDAARALGQALQLNSSLT 593

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
             D    +  D   S  A+                   +LK    L  L L   + G  G
Sbjct: 594 SLDLQENAIRDEGASALAT-------------------ALKVNTALTALYLQVASIGAPG 634

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
              L + L  +    LE L L  N +G++G K L+ AL                      
Sbjct: 635 ALALGEAL--AVNRTLEILDLRGNAIGVSGAKALANAL---------------------- 670

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
                           K   +L R+ + +N +   G+  ++ A   N  L+H+NL  N I
Sbjct: 671 ----------------KVNSSLRRLSLQENSLGMDGVIGVAMALSGNHGLQHINLQGNHI 714

Query: 362 TYKGAIPLGQAL 373
              GA  + +A+
Sbjct: 715 GESGARMISEAI 726



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L  +++ +N I   G +AL+ A + N  L  L L   +I   GA+ LG+AL+   +L I
Sbjct: 591 SLTSLDLQENAIRDEGASALATALKVNTALTALYLQVASIGAPGALALGEALAVNRTLEI 650

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    +  +GA ++A  L  N++L  ++L  N + + G + +  A+     L+ IN+ 
Sbjct: 651 LDLRGNAIGVSGAKALANALKVNSSLRRLSLQENSLGMDGVIGVAMALSGNHGLQHINLQ 710

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N  GE G   + + +K+
Sbjct: 711 GNHIGESGARMISEAIKT 728



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TLE +++  N I   G  AL++A + N  LR L+L +N++   G I +  ALS    L 
Sbjct: 646 RTLEILDLRGNAIGVSGAKALANALKVNSSLRRLSLQENSLGMDGVIGVAMALSGNHGLQ 705

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
            +NL    +  +GA  I++ +  N  +  V +
Sbjct: 706 HINLQGNHIGESGARMISEAIKTNAPMCTVEM 737


>gi|350296456|gb|EGZ77433.1| RNI-like protein [Neurospora tetrasperma FGSC 2509]
          Length = 418

 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 9/203 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 97  KLNTINLNDNAFGLNTQAPLVAFL--AAHIPLQHLYLNNNGLGPHAGILIADALSELHAK 154

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E ++K+G  +  L+  I GRNRLEN      A  F+    +++++M QNGI   GI+  
Sbjct: 155 KEEARKQGQDVPYLETVICGRNRLENGSMTAWAKTFRLHNKVKQIKMVQNGIRQEGISHL 214

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS+       L+ L+L DNT T KGA  L +       L  L +GD LL + G   +++ 
Sbjct: 215 LSEGLNHASELQILDLQDNTFTLKGAKALAKVTPGWTELIELGIGDSLLSAKGGVLLSEA 274

Query: 401 LT--DNTTLEDVNLTCNEISVQG 421
           L    N  LE + L  NEI+ +G
Sbjct: 275 LLKGKNKKLEILRLQYNEITARG 297



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           A  F+    ++ ++M QNGI   GI+  LS+      +L+ L+L DNT T KGA  L + 
Sbjct: 187 AKTFRLHNKVKQIKMVQNGIRQEGISHLLSEGLNHASELQILDLQDNTFTLKGAKALAKV 246

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG 110
                 L  L +GD LL + G   +++ L    N  LE + L  NEI+ +G
Sbjct: 247 TPGWTELIELGIGDSLLSAKGGVLLSEALLKGKNKKLEILRLQYNEITARG 297


>gi|393244463|gb|EJD51975.1| Ran GTPase activator [Auricularia delicata TFB-10046 SS5]
          Length = 415

 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 86/180 (47%), Gaps = 12/180 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L+LSDNAFG   VE +   L  +   +L    L NNGLG  G  +++ A+
Sbjct: 88  ALKDSKTLHTLNLSDNAFGGRVVEPMVPFLTHNT--SLRHFILTNNGLGPEGASVVASAI 145

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +      K G    L+  + GRNRLEN  A   A  F  L  LE V +PQNGI   GI+
Sbjct: 146 LENARLRAKGGGASQLRSVVCGRNRLENGSAASWAEAFAALPHLEEVRLPQNGIRAEGIS 205

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIP----------LGQALSKLPSLAILNLGDCLL 389
            +         LR L+L DNT   + A P          L  AL   P L ILN+ DC+L
Sbjct: 206 QIVRGLAACPKLRILDLQDNTFCKRDAEPGSEPPNGTRVLASALPSWPGLEILNVSDCIL 265



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIP----------L 58
           L  LE V +PQNGI   GI+ +        KLR L+L DNT   + A P          L
Sbjct: 186 LPHLEEVRLPQNGIRAEGISQIVRGLAACPKLRILDLQDNTFCKRDAEPGSEPPNGTRVL 245

Query: 59  GQALSKLPSLAILNLGDCLL 78
             AL   P L ILN+ DC+L
Sbjct: 246 ASALPSWPGLEILNVSDCIL 265


>gi|336464365|gb|EGO52605.1| hypothetical protein NEUTE1DRAFT_72406 [Neurospora tetrasperma FGSC
           2508]
          Length = 418

 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 9/203 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 97  KLNTINLNDNAFGLNTQAPLVAFL--AAHVPLQHLYLNNNGLGPHAGILIADALSELHAK 154

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E ++K+G  +  L+  I GRNRLEN      A  F+    +++++M QNGI   GI+  
Sbjct: 155 KEEARKQGQDVPYLETVICGRNRLENGSMTAWAKTFRLHNKVKQIKMVQNGIRQEGISHL 214

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS+       L+ L+L DNT T KGA  L +       L  L +GD LL + G   +++ 
Sbjct: 215 LSEGLNHASQLQILDLQDNTFTLKGAKALAKVTPGWTELIELGIGDSLLSAKGGILLSEA 274

Query: 401 LT--DNTTLEDVNLTCNEISVQG 421
           L    N  LE + L  NEI+ +G
Sbjct: 275 LLKGKNKKLEILRLQYNEITARG 297



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 3/111 (2%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           A  F+    ++ ++M QNGI   GI+  LS+      +L+ L+L DNT T KGA  L + 
Sbjct: 187 AKTFRLHNKVKQIKMVQNGIRQEGISHLLSEGLNHASQLQILDLQDNTFTLKGAKALAKV 246

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG 110
                 L  L +GD LL + G   +++ L    N  LE + L  NEI+ +G
Sbjct: 247 TPGWTELIELGIGDSLLSAKGGILLSEALLKGKNKKLEILRLQYNEITARG 297


>gi|425781062|gb|EKV19044.1| Ran GTPase activating protein 1 (RNA1 protein) [Penicillium
           digitatum PHI26]
 gi|425783195|gb|EKV21054.1| Ran GTPase activating protein 1 (RNA1 protein) [Penicillium
           digitatum Pd1]
          Length = 418

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 110/228 (48%), Gaps = 11/228 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++L+DNAFG      L + L  S    L  L LNNNGLG      ++ AL    E  ++ 
Sbjct: 100 VNLNDNAFGLRTQAPLIEFL--SRHVPLRHLILNNNGLGPAAGSQVADALSKLAERKEEA 157

Query: 290 ---GSPLAL-KVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT-ALSD 343
              G  + L +  + GRNRLEN   +  A  +K     L+ V+M QNGI   GI+  LS 
Sbjct: 158 RNCGEEVGLLESVVCGRNRLENGSMEAWARAYKAHAAGLKSVKMTQNGIRSEGISHLLSQ 217

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT- 402
                 +L  L+L DNT T  G+  L  ALS  P L  L +GDCLL + G   +A+ L  
Sbjct: 218 GLYHAHSLEVLDLQDNTFTNVGSTALSNALSGWPELRELGVGDCLLSARGGVKVAQALAA 277

Query: 403 -DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
             N  L+ + L  NE+  +       A K     L++I ++ N F EE
Sbjct: 278 NKNQKLQTLRLQYNEMKAEAVKSFTHAAKTALPSLRRIELNGNIFSEE 325



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ V+M QNGI   GI+  LS        L  L+L DNT T  G+  L  ALS  P L  
Sbjct: 196 LKSVKMTQNGIRSEGISHLLSQGLYHAHSLEVLDLQDNTFTNVGSTALSNALSGWPELRE 255

Query: 71  LNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL + G   +A+ L    N  L+ + L  NE+  +       A K     L++I
Sbjct: 256 LGVGDCLLSARGGVKVAQALAANKNQKLQTLRLQYNEMKAEAVKSFTHAAKTALPSLRRI 315

Query: 128 NVSENQFGEE 137
            ++ N F EE
Sbjct: 316 ELNGNIFSEE 325


>gi|172436|gb|AAA34985.1| RNA1-1 allele rna1-1 [Saccharomyces cerevisiae]
          Length = 407

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 6/177 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   +E L D +  +    ++ L L+NNG+G    + + KAL    ++ K  
Sbjct: 113 VNLSDNAFGLRTIELLEDYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ FI GRNRLEN  A  L    K   + L+ V++ QNGI   G+ T +    + 
Sbjct: 171 SKPF-LETFICGRNRLENGSAVYLVLGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTD 403
            KNL  L+L DNT T   ++ L +AL     SL  LNL DCLLK+AG+  + K  T+
Sbjct: 230 LKNLEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFTE 286



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L  L+L DNT T   ++ L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTWKDSLF 263

Query: 70  ILNLGDCLLKSAGASSIAKYLTD 92
            LNL DCLLK+AG+  + K  T+
Sbjct: 264 ELNLNDCLLKTAGSDEVFKVFTE 286


>gi|326434434|gb|EGD80004.1| hypothetical protein PTSG_10280 [Salpingoeca sp. ATCC 50818]
          Length = 1272

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 12/252 (4%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  LDL  N  GP G   LA++L+ +   AL++L L  N +G  G   L++ L 
Sbjct: 116 LKHNTTLERLDLFGNDIGPEGAAALAEMLKHNT--ALKQLYLGGNRIGPEGAVALAEML- 172

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                  K  + + L       NR+  EGA  LA + K   TLER+++  N I   G  A
Sbjct: 173 -------KHNTTMTLLALY--NNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVA 223

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L++  + N  +  L L++N+I  +GA+ L + L    +L  L L +  +   GA ++A+ 
Sbjct: 224 LAEMLKHNTTMTGLGLSNNSIGDEGAVALAEMLKHNTALKRLYLYNNRIGPEGAVALAEM 283

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           L  NTTLE + L  N I  +G   L + +K+ T +  + +S N   E G+  + K ++  
Sbjct: 284 LKHNTTLERLGLGANSIGPRGAAALAEMLKHNTTMTSLFISHNGITERGMVNVLKQLQHI 343

Query: 461 GMAAALVLEDDE 472
              A ++L +D+
Sbjct: 344 DAKAKILLFEDK 355



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 40/239 (16%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  LDL  N+ GP G   LA++L+ +    LE L L  N +G           
Sbjct: 59  ALKDNTCLKALDLWGNSIGPEGAVALAEMLKHNTT--LERLDLFGNDIG----------- 105

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                                       EGA  LA + K   TLER+++  N I   G  
Sbjct: 106 ---------------------------PEGAVALAEMLKHNTTLERLDLFGNDIGPEGAA 138

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL++  + N  L+ L L  N I  +GA+ L + L    ++ +L L +  +   GA ++A+
Sbjct: 139 ALAEMLKHNTALKQLYLGGNRIGPEGAVALAEMLKHNTTMTLLALYNNRIGPEGAVALAE 198

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NTTLE ++L  N+I  +G + L + +K+ T +  + +S N  G+EG   + +++K
Sbjct: 199 MLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLGLSNNSIGDEGAVALAEMLK 257



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 149/336 (44%), Gaps = 41/336 (12%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L  L+L    +   GA ++A+ L  NTTLE ++L  N+I  +G + L + +K+ T L+++
Sbjct: 66  LKALDLWGNSIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTLERL 125

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD----EGECSDEEQDEESEEENDSDAEG 183
           ++  N  G EG   + +++K       L L  +    EG  +  E               
Sbjct: 126 DLFGNDIGPEGAAALAEMLKHNTALKQLYLGGNRIGPEGAVALAEM-------------- 171

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
               L HN +          +NN          + M LK    L  LDL  N  GP G  
Sbjct: 172 ----LKHNTTM----TLLALYNNRIGPEGAVALAEM-LKHNTTLERLDLFGNDIGPEGAV 222

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL-HDCYESSKKEGSPLALKVFIAGR 302
            LA++L+ +    +  L L+NN +G  G   L++ L H+            ALK      
Sbjct: 223 ALAEMLKHNTT--MTGLGLSNNSIGDEGAVALAEMLKHNT-----------ALKRLYLYN 269

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NR+  EGA  LA + K   TLER+ +  N I   G  AL++  + N  +  L ++ N IT
Sbjct: 270 NRIGPEGAVALAEMLKHNTTLERLGLGANSIGPRGAAALAEMLKHNTTMTSLFISHNGIT 329

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            +G + + + L  + + A + L +  LKS+ A + A
Sbjct: 330 ERGMVNVLKQLQHIDAKAKILLFEDKLKSSTAVARA 365



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 21/265 (7%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A ++N  L+ L+L  N+I  +GA+ L + L    +L  L+L    +   GA ++A+
Sbjct: 55  AVAEALKDNTCLKALDLWGNSIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAE 114

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L  NTTLE ++L  N+I  +G   L + +K+ T LKQ+ +  N+ G EG   + +++K 
Sbjct: 115 MLKHNTTLERLDLFGNDIGPEGAAALAEMLKHNTALKQLYLGGNRIGPEGAVALAEMLKH 174

Query: 149 FGMAAALVLEDD----EGECSDEEQDEESEE-------ENDSDAEGDNS---NLSHNDSN 194
                 L L ++    EG  +  E  + +          ND   EG  +    L HN + 
Sbjct: 175 NTTMTLLALYNNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTM 234

Query: 195 HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
                S    NNS         + M LK    L  L L +N  GP G   LA++L+ +  
Sbjct: 235 TGLGLS----NNSIGDEGAVALAEM-LKHNTALKRLYLYNNRIGPEGAVALAEMLKHNTT 289

Query: 255 FALEELKLNNNGLGITGCKLLSKAL 279
             LE L L  N +G  G   L++ L
Sbjct: 290 --LERLGLGANSIGPRGAAALAEML 312



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 80/146 (54%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K   TLE +++  N I   G  AL++  + N  L+ L L  N I  +GA+ L + 
Sbjct: 112 LAEMLKHNTTLERLDLFGNDIGPEGAAALAEMLKHNTALKQLYLGGNRIGPEGAVALAEM 171

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++ +L L +  +   GA ++A+ L  NTTLE ++L  N+I  +G + L + +K+ 
Sbjct: 172 LKHNTTMTLLALYNNRIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHN 231

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T +  + +S N  G+EG   + +++K
Sbjct: 232 TTMTGLGLSNNSIGDEGAVALAEMLK 257



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 83/160 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K   TLE +++  N I   G  AL++  + N  +  L L++N+I  +GA+ L + 
Sbjct: 196 LAEMLKHNTTLERLDLFGNDIGPEGAVALAEMLKHNTTMTGLGLSNNSIGDEGAVALAEM 255

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +   GA ++A+ L  NTTLE + L  N I  +G   L + +K+ 
Sbjct: 256 LKHNTALKRLYLYNNRIGPEGAVALAEMLKHNTTLERLGLGANSIGPRGAAALAEMLKHN 315

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           T +  + +S N   E G+  + K ++     A ++L +D+
Sbjct: 316 TTMTSLFISHNGITERGMVNVLKQLQHIDAKAKILLFEDK 355



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 70/119 (58%)

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A ++N  L+ L+L  N+I  +GA+ L + L    +L  L+L    +   GA ++A+
Sbjct: 55  AVAEALKDNTCLKALDLWGNSIGPEGAVALAEMLKHNTTLERLDLFGNDIGPEGAVALAE 114

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NTTLE ++L  N+I  +G   L + +K+ T LKQ+ +  N+ G EG   + +++K
Sbjct: 115 MLKHNTTLERLDLFGNDIGPEGAAALAEMLKHNTALKQLYLGGNRIGPEGAVALAEMLK 173


>gi|322699148|gb|EFY90912.1| ran GTPase activating protein 1 [Metarhizium acridum CQMa 102]
          Length = 417

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 118/243 (48%), Gaps = 16/243 (6%)

Query: 213 TSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
           TS  +H +L T      ++L+DNAFG      L   L  S    L+ L LNNNGLG    
Sbjct: 89  TSILNHPNLHT------VNLNDNAFGLNTQAPLVAFL--SAHVPLQHLYLNNNGLGPHAG 140

Query: 273 KLLSKAL---HDCYESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
            L++ AL   H   E+++KEG  +  L+  I GRNRLEN      A  ++    ++ ++M
Sbjct: 141 ILVADALSELHAKKEAARKEGKQVPDLETVICGRNRLENGSMTAWAKAYRLHNKIQHIKM 200

Query: 329 PQNGIYHVGITAL-SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
            QNGI   GI+ L S+       L+ L+L DNT T  GA  L   ++    +  L +GD 
Sbjct: 201 VQNGIRQEGISHLISEGLVHATELQILDLQDNTFTLTGAKALANVVTNWTVVRELGIGDS 260

Query: 388 LLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKAMKNKTKLKQINVSENQ 444
           LL + G    AK L    N  +E + L  N+I+  G       A      LK+I ++ N+
Sbjct: 261 LLSAKGGVLFAKALAKGKNRKVEILRLQYNDITATGIKAFAAAAKDALPALKRIELNGNK 320

Query: 445 FGE 447
           F E
Sbjct: 321 FDE 323



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 8/169 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  ++    ++H++M QNGI   GI+ L S+      +L+ L+L DNT T  GA  L  
Sbjct: 185 WAKAYRLHNKIQHIKMVQNGIRQEGISHLISEGLVHATELQILDLQDNTFTLTGAKALAN 244

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG-GLDLVKA 117
            ++    +  L +GD LL + G    AK L    N  +E + L  N+I+  G       A
Sbjct: 245 VVTNWTVVRELGIGDSLLSAKGGVLFAKALAKGKNRKVEILRLQYNDITATGIKAFAAAA 304

Query: 118 MKNKTKLKQINVSENQFGE--EGVEEMEKLM--KSFGMAAALVLEDDEG 162
                 LK+I ++ N+F E  E +  +++L+  +   +A  ++ ED+ G
Sbjct: 305 KDALPALKRIELNGNKFDEADESILFLQELLDQRKEKLAGDVINEDEWG 353


>gi|452989556|gb|EME89311.1| Ran GTPase-activating protein [Pseudocercospora fijiensis CIRAD86]
          Length = 417

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 121/245 (49%), Gaps = 13/245 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE- 284
           +L  ++L+DNAFG   VE L   L  S    L+ L LNNNGLG     L+++AL    E 
Sbjct: 94  KLHTINLNDNAFGLNTVEPLRPFL--SQHTPLQHLYLNNNGLGPAAGTLVAEALTQLAEN 151

Query: 285 --SSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
             +++KEG  +  L+  I GRNRLE          +     ++ V+M QNGI   GI  L
Sbjct: 152 KIAARKEGKDVPDLETVICGRNRLETGSMPAWVKAYTANNKVKTVKMVQNGIRQEGIAQL 211

Query: 342 -SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
                     L  L+L DNT T   A  L   +     +  L +GDCLL + G   + + 
Sbjct: 212 IQHGLSNCAELDTLDLQDNTFTALAAKTLSTIVPSWTQIRDLGVGDCLLSARGGRMLGEA 271

Query: 401 LTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKT--KLKQINVSENQFGEE--GVEEME 454
           L    N  LE + L  NEI  +G   L +A +     +L+++ ++ N+F EE   +E++ 
Sbjct: 272 LAKAGNKKLEVLRLQYNEIDSKGLKALSEAAQGSALPRLRRVELNGNKFAEEDPSIEKLR 331

Query: 455 KLMKS 459
           +++++
Sbjct: 332 EVLET 336



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 8   KLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+KT   V+M QNGI   GI  L         +L  L+L DNT T   A  L   +    
Sbjct: 192 KVKT---VKMVQNGIRQEGIAQLIQHGLSNCAELDTLDLQDNTFTALAAKTLSTIVPSWT 248

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKT-- 122
            +  L +GDCLL + G   + + L    N  LE + L  NEI  +G   L +A +     
Sbjct: 249 QIRDLGVGDCLLSARGGRMLGEALAKAGNKKLEVLRLQYNEIDSKGLKALSEAAQGSALP 308

Query: 123 KLKQINVSENQFGEE--GVEEMEKLMKS 148
           +L+++ ++ N+F EE   +E++ +++++
Sbjct: 309 RLRRVELNGNKFAEEDPSIEKLREVLET 336


>gi|47197321|emb|CAF89072.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 206

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 30/177 (16%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL---------- 58
           L +LE V +PQNGI H G+ AL+ A   N++LR LN NDNT T KG + +          
Sbjct: 3   LGSLEEVHLPQNGINHAGVVALASAARHNRQLRVLNFNDNTFTKKGTLAMAKVSPGRRLP 62

Query: 59  -------------------GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLED 98
                               QAL  L +L ++N GDCL++S GA ++A  L +    L++
Sbjct: 63  SREQVCVCVLCALVHSGLSAQALRHLRNLQVVNFGDCLVRSEGAIALAAVLREGLPVLKE 122

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           +NL+  EI+    L + +A+ +K ++++++++ N  GEEG E + + M+    A  L
Sbjct: 123 LNLSFGEITEAAALVVARAVADKPQMEKLDLNGNCLGEEGCEALREAMEDMDRADML 179



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 30/177 (16%)

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL---------- 369
           L +LE V +PQNGI H G+ AL+ A   N+ LR LN NDNT T KG + +          
Sbjct: 3   LGSLEEVHLPQNGINHAGVVALASAARHNRQLRVLNFNDNTFTKKGTLAMAKVSPGRRLP 62

Query: 370 -------------------GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLED 409
                               QAL  L +L ++N GDCL++S GA ++A  L +    L++
Sbjct: 63  SREQVCVCVLCALVHSGLSAQALRHLRNLQVVNFGDCLVRSEGAIALAAVLREGLPVLKE 122

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
           +NL+  EI+    L + +A+ +K ++++++++ N  GEEG E + + M+    A  L
Sbjct: 123 LNLSFGEITEAAALVVARAVADKPQMEKLDLNGNCLGEEGCEALREAMEDMDRADML 179


>gi|323307665|gb|EGA60930.1| Rna1p [Saccharomyces cerevisiae FostersO]
          Length = 407

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 96/176 (54%), Gaps = 6/176 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++ SDNAFG   +E L D +  +    ++ L L+NNG+G    + + KAL    ++ K  
Sbjct: 113 VNFSDNAFGLRTIELLEDYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ FI GRNRLEN  A  LA   K   + L+ V++ QNGI   G+ T +    + 
Sbjct: 171 SKPF-LETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
            KNL  L+L DNT T   ++ L +AL     SL  LNL DCLLK+AG+  + K  T
Sbjct: 230 LKNLEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFT 285



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L  L+L DNT T   ++ L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTWKDSLF 263

Query: 70  ILNLGDCLLKSAGASSIAKYLT 91
            LNL DCLLK+AG+  + K  T
Sbjct: 264 ELNLNDCLLKTAGSDEVFKVFT 285


>gi|85117705|ref|XP_965307.1| hypothetical protein NCU03207 [Neurospora crassa OR74A]
 gi|28927114|gb|EAA36071.1| hypothetical protein NCU03207 [Neurospora crassa OR74A]
          Length = 419

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 103/203 (50%), Gaps = 9/203 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      L   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 97  KLNTINLNDNAFGLNTQAPLVAFL--AAHVPLQHLYLNNNGLGPHAGILIADALSELHAK 154

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-A 340
            E ++K+G  +  L+  I GRNRLEN      A  F+    +++++M QNGI   GI+  
Sbjct: 155 KEEARKQGQDVPYLETVICGRNRLENGSMTAWAKTFRLHNKVKQIKMVQNGIRQEGISHL 214

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           LS+       L+ L+L DNT T KGA  L +       L  L +GD LL + G   +++ 
Sbjct: 215 LSEGLNHASELQILDLQDNTFTLKGARALAKVTPGWTELIELGIGDSLLSAKGGVLLSEA 274

Query: 401 LT--DNTTLEDVNLTCNEISVQG 421
           L    N  LE + L  NEI+  G
Sbjct: 275 LRKGKNKKLEILRLQYNEITAPG 297



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           A  F+    ++ ++M QNGI   GI+  LS+      +L+ L+L DNT T KGA  L + 
Sbjct: 187 AKTFRLHNKVKQIKMVQNGIRQEGISHLLSEGLNHASELQILDLQDNTFTLKGARALAKV 246

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQG 110
                 L  L +GD LL + G   +++ L    N  LE + L  NEI+  G
Sbjct: 247 TPGWTELIELGIGDSLLSAKGGVLLSEALRKGKNKKLEILRLQYNEITAPG 297


>gi|367019126|ref|XP_003658848.1| hypothetical protein MYCTH_2295155 [Myceliophthora thermophila ATCC
           42464]
 gi|347006115|gb|AEO53603.1| hypothetical protein MYCTH_2295155 [Myceliophthora thermophila ATCC
           42464]
          Length = 421

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 112/227 (49%), Gaps = 10/227 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDCYESS 286
           ++L+DNAFG      L   L       L+ L LNNNGLG     L++ AL   H   E++
Sbjct: 101 VNLNDNAFGLNTQAPLVAFLAEHV--PLQHLYLNNNGLGPHAGILVADALSELHAKKEAA 158

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
           +K G  +  L+  I GRNRLEN      A  FK    ++ V+M QNGI   GI+  L + 
Sbjct: 159 RKAGQQVPDLETVICGRNRLENGSMTAWAKAFKLHNKVKEVKMVQNGIRQEGISHLLKEG 218

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
                 L  L+L DNT T  GA  L         L  L +GD LL + G   +AK L   
Sbjct: 219 LRYATQLEVLDLQDNTFTLLGARALAAVTPGWTELVDLGVGDSLLGAKGGVVLAKALKKG 278

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
            NT L+ + L  NEI+  G   L +A++     L+++ ++ N+F E+
Sbjct: 279 KNTKLKILRLQYNEITSSGVKALAEAVEEALPALRKLELNGNKFTED 325



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 8/168 (4%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           A  FK    ++ V+M QNGI   GI+  L +      +L  L+L DNT T  GA  L   
Sbjct: 187 AKAFKLHNKVKEVKMVQNGIRQEGISHLLKEGLRYATQLEVLDLQDNTFTLLGARALAAV 246

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
                 L  L +GD LL + G   +AK L    NT L+ + L  NEI+  G   L +A++
Sbjct: 247 TPGWTELVDLGVGDSLLGAKGGVVLAKALKKGKNTKLKILRLQYNEITSSGVKALAEAVE 306

Query: 120 NK-TKLKQINVSENQFGE--EGVEEMEKLMKSF--GMAAALVLEDDEG 162
                L+++ ++ N+F E  E +  ++ L ++     A  +V+ED+ G
Sbjct: 307 EALPALRKLELNGNKFTEDDESIIALQDLFEARKEKQAGDVVVEDEWG 354



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 127/327 (38%), Gaps = 45/327 (13%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL---LKSAGASSIAKYLTDNTTLED- 98
           ++L  NT+       LG+ L+   SL + NL D     L S    +I+  LT    L + 
Sbjct: 39  VHLLGNTLGVGACKLLGEVLATKKSLRVANLADIFTGRLLSEIPEAISSLLTSILNLPNL 98

Query: 99  --VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
             VNL  N   +     LV  +     L+ + ++ N  G                 A ++
Sbjct: 99  NTVNLNDNAFGLNTQAPLVAFLAEHVPLQHLYLNNNGLGPH---------------AGIL 143

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGD--NSNLSHNDSNHSHNASNQSHNNSNQSHNTS 214
           + D   E   +++      +   D E      N   N S  +   + + HN   +     
Sbjct: 144 VADALSELHAKKEAARKAGQQVPDLETVICGRNRLENGSMTAWAKAFKLHNKVKEVKMVQ 203

Query: 215 NQ------SHM---SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
           N       SH+    L+   +L  LDL DN F  +G   LA +  +     L +L + ++
Sbjct: 204 NGIRQEGISHLLKEGLRYATQLEVLDLQDNTFTLLGARALAAV--TPGWTELVDLGVGDS 261

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLE 324
            LG  G  +L+KAL        K+G    LK+     N + + G K LA AV + L  L 
Sbjct: 262 LLGAKGGVVLAKAL--------KKGKNTKLKILRLQYNEITSSGVKALAEAVEEALPALR 313

Query: 325 RVEMPQNGIYH--VGITALSDAFEENK 349
           ++E+  N        I AL D FE  K
Sbjct: 314 KLELNGNKFTEDDESIIALQDLFEARK 340


>gi|46447089|ref|YP_008454.1| hypothetical protein pc1455 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400730|emb|CAF24179.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1866

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 209/472 (44%), Gaps = 41/472 (8%)

Query: 20   NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
            N I   G  A + A   N  L+ L L  N I+ KG     QAL+   +L  L+  +  + 
Sbjct: 1380 NQISDRGAEAFAQALASNTTLKSLYLGGNQISDKGMEAFAQALASNTTLESLSFNENQIS 1439

Query: 80   SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
              G  + A+ L  NTTLE + L  N+IS +G     +A+ + T LK + + +NQ  ++G+
Sbjct: 1440 DKGMEAFAQALASNTTLESLYLGGNQISDKGMEAFAQALASNTTLKSLYLDDNQISDKGM 1499

Query: 140  EEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHS-HN 198
            E   + + S     +L    +E + SD+              E     L+ N +  S + 
Sbjct: 1500 EAFAQALASNTTLKSLSF--NENQISDK------------GMEAFAQALASNTTFKSLYL 1545

Query: 199  ASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALE 258
              NQ  +   ++   +  S+ +LK+      L L DN     G + LA  L S+    L+
Sbjct: 1546 GGNQISDKGMEAFAQALASNTTLKS------LYLDDNQISNKGAQALAQALASNTI--LK 1597

Query: 259  ELKLNNNGLGITG-----------CKLLSKALHDCYESSK-------KEGSPLALKVFIA 300
             L  N N +   G             L S  L D   S K          S  ALK    
Sbjct: 1598 SLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQALASNKALKSLCL 1657

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
            G N++ ++GA+ LA       TL+ + +    I   G+ A++ A   N  L+ L+LN   
Sbjct: 1658 GSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAIAQALASNTTLKSLSLNGKQ 1717

Query: 361  ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
            I+ KG     Q L+   +L  L+L +  +   G  + A+ L  NTTLE ++L  N+I+ +
Sbjct: 1718 ISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTLASNTTLESLDLRNNQINDK 1777

Query: 421  GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            G   + +A+ + T LK + +  NQ  ++G+E + + + S     +L L+ ++
Sbjct: 1778 GMEAIAQALASNTALKSLYLDGNQINDKGMEAIAQALASNTALKSLYLDGNQ 1829



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 204/454 (44%), Gaps = 39/454 (8%)

Query: 37   NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
            N  L+   L  N I+ +GA    QAL+   +L  L LG   +   G  + A+ L  NTTL
Sbjct: 1369 NTALKSFWLKGNQISDRGAEAFAQALASNTTLKSLYLGGNQISDKGMEAFAQALASNTTL 1428

Query: 97   EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
            E ++   N+IS +G     +A+ + T L+ + +  NQ  ++G+E   + + S     +L 
Sbjct: 1429 ESLSFNENQISDKGMEAFAQALASNTTLESLYLGGNQISDKGMEAFAQALASNTTLKSLY 1488

Query: 157  LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
            L+D+  + SD+        E  + A   N+ L     N      NQ  +   ++   +  
Sbjct: 1489 LDDN--QISDKGM------EAFAQALASNTTLKSLSFNE-----NQISDKGMEAFAQALA 1535

Query: 217  SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCK--- 273
            S+ + K+      L L  N     G+E  A  L S+    L+ L L++N +   G +   
Sbjct: 1536 SNTTFKS------LYLGGNQISDKGMEAFAQALASNT--TLKSLYLDDNQISNKGAQALA 1587

Query: 274  --------LLSKALHDCYESSK-------KEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
                    L S + ++   S K          S   LK      +++ ++GA+ LA    
Sbjct: 1588 QALASNTILKSLSFNENQISDKGAQALAQALASNTTLKSLYLDDSQISDKGAQALAQALA 1647

Query: 319  KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
              K L+ + +  N I   G  AL+ A   N  L+ L+LN   I+ KG   + QAL+   +
Sbjct: 1648 SNKALKSLCLGSNQISDKGAQALAQALASNTTLKSLSLNGKQISDKGMEAIAQALASNTT 1707

Query: 379  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
            L  L+L    +   G  + A+ L  NTTLE ++L  N+IS +G     + + + T L+ +
Sbjct: 1708 LKSLSLNGKQISDKGMEAFAQTLASNTTLESLDLRNNQISDKGMQAFAQTLASNTTLESL 1767

Query: 439  NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            ++  NQ  ++G+E + + + S     +L L+ ++
Sbjct: 1768 DLRNNQINDKGMEAIAQALASNTALKSLYLDGNQ 1801



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 31/274 (11%)

Query: 37   NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
            N  L+ L L+D+ I+ KGA  L QAL+   +L  L LG   +   GA ++A+ L  NTTL
Sbjct: 1621 NTTLKSLYLDDSQISDKGAQALAQALASNKALKSLCLGSNQISDKGAQALAQALASNTTL 1680

Query: 97   EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
            + ++L   +IS +G   + +A+ + T LK ++++  Q  ++G+E   + + S        
Sbjct: 1681 KSLSLNGKQISDKGMEAIAQALASNTTLKSLSLNGKQISDKGMEAFAQTLAS-------- 1732

Query: 157  LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
                    + E  D  + + +D   +     L+ N +  S +  N   N+          
Sbjct: 1733 ------NTTLESLDLRNNQISDKGMQAFAQTLASNTTLESLDLRNNQINDKGMEAIAQ-- 1784

Query: 217  SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS 276
               +L +   L  L L  N     G+E +A  L S+   AL+ L L+ N +   G + ++
Sbjct: 1785 ---ALASNTALKSLYLDGNQINDKGMEAIAQALASNT--ALKSLYLDGNQINDKGMEAIT 1839

Query: 277  KALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +A+           S  ALK F    N ++ EG 
Sbjct: 1840 QAV----------ASNTALKKFWLNGNLIKQEGV 1863


>gi|320170651|gb|EFW47550.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 513

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L EL L+ N  G  G + +A+ L+ +    L +L L  N +G  G + +++AL
Sbjct: 66  ALEVNTTLTELRLNQNQIGDAGAKAIAEALKVNTT--LTKLNLWANQIGEAGAQAIAEAL 123

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +   L+     RN++ + GAK +A   K   TL  + + +N     G+ 
Sbjct: 124 -------KVNAT---LRTLYLDRNQIGDAGAKAIAEALKVNATLRTLYLDRNQFGDAGVQ 173

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++ A + NK L  LNL D  I   GA  L +AL    +LA+L L +  L  AGA +IA+
Sbjct: 174 AIAKALQVNKTLSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLGDAGAQAIAE 233

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NT L  ++L  N+I   G   + +A+K  + L Q+ ++ NQ G+ G +   + ++
Sbjct: 234 ALKSNTMLTFLDLWANQIGEAGAQAIAEALKMNSTLIQLFLNGNQIGDFGAKAFAEALR 292



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 149/342 (43%), Gaps = 59/342 (17%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  ++M ++ +   G  A ++A E N  L  L LN N I   GA  + +AL    +L  
Sbjct: 44  TLTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQNQIGDAGAKAIAEALKVNTTLTK 103

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    +  AGA +IA+ L  N TL  + L  N+I   G   + +A+K    L+ + + 
Sbjct: 104 LNLWANQIGEAGAQAIAEALKVNATLRTLYLDRNQIGDAGAKAIAEALKVNATLRTLYLD 163

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            NQFG+ GV+ + K ++     + L L D              ++  D+ A+     L  
Sbjct: 164 RNQFGDAGVQAIAKALQVNKTLSWLNLID--------------KQIGDAGAQALAEALRV 209

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
           N                                 A L  L L +N  G  G + +A+ L+
Sbjct: 210 N---------------------------------ATLAVLYLRENRLGDAGAQAIAEALK 236

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           S+       L L  N +G  G + +++AL        K  S L +++F+ G N++ + GA
Sbjct: 237 SNTMLTF--LDLWANQIGEAGAQAIAEAL--------KMNSTL-IQLFLNG-NQIGDFGA 284

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
           K  A   +   T++R+++  NGI ++G  A+ +A + N   R
Sbjct: 285 KAFAEALRVNMTVQRLDLTGNGIGNLGAQAIDEARQVNDKCR 326



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 12/238 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  LD+ ++     G +  A+ L  +    L EL+LN N +G  G K +++AL 
Sbjct: 39  LKVNTTLTVLDMKEHHLDDDGAKAFAEALEVNTT--LTELRLNQNQIGDAGAKAIAEAL- 95

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                 K   +   L ++    N++   GA+ +A   K   TL  + + +N I   G  A
Sbjct: 96  ------KVNTTLTKLNLWA---NQIGEAGAQAIAEALKVNATLRTLYLDRNQIGDAGAKA 146

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++A + N  LR L L+ N     G   + +AL    +L+ LNL D  +  AGA ++A+ 
Sbjct: 147 IAEALKVNATLRTLYLDRNQFGDAGVQAIAKALQVNKTLSWLNLIDKQIGDAGAQALAEA 206

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L  N TL  + L  N +   G   + +A+K+ T L  +++  NQ GE G + + + +K
Sbjct: 207 LRVNATLAVLYLRENRLGDAGAQAIAEALKSNTMLTFLDLWANQIGEAGAQAIAEALK 264



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 34/315 (10%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + + QN I   G  A+++A + N  L  LNL  N I   GA  + +AL    +L  
Sbjct: 72  TLTELRLNQNQIGDAGAKAIAEALKVNTTLTKLNLWANQIGEAGAQAIAEALKVNATLRT 131

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    +  AGA +IA+ L  N TL  + L  N+    G   + KA++    L  +N+ 
Sbjct: 132 LYLDRNQIGDAGAKAIAEALKVNATLRTLYLDRNQFGDAGVQAIAKALQVNKTLSWLNLI 191

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
           + Q G+ G + + + ++     A L L         E +  ++  +  ++A   N+ L+ 
Sbjct: 192 DKQIGDAGAQALAEALRVNATLAVLYLR--------ENRLGDAGAQAIAEALKSNTMLTF 243

Query: 191 ND--SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
            D  +N    A  Q+                +LK  + L++L L+ N  G  G +  A+ 
Sbjct: 244 LDLWANQIGEAGAQAIAE-------------ALKMNSTLIQLFLNGNQIGDFGAKAFAEA 290

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALH---DCYESSKKEGSPLALKVFIAGRNRL 305
           LR +    ++ L L  NG+G  G + + +A      C  +   + +PL L +    R RL
Sbjct: 291 LRVNMT--VQRLDLTGNGIGNLGAQAIDEARQVNDKCRVNIDSQINPLTLSL----RPRL 344

Query: 306 ENEGAKMLAAVFKKL 320
               AK + AVF  L
Sbjct: 345 AT--AKDIQAVFHLL 357



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 12/236 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L +L+L  N  G  G + +A+ L+ +    L  L L+ N +G  G K +++AL
Sbjct: 94  ALKVNTTLTKLNLWANQIGEAGAQAIAEALKVNAT--LRTLYLDRNQIGDAGAKAIAEAL 151

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +   L+     RN+  + G + +A   +  KTL  + +    I   G  
Sbjct: 152 -------KVNAT---LRTLYLDRNQFGDAGVQAIAKALQVNKTLSWLNLIDKQIGDAGAQ 201

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL++A   N  L  L L +N +   GA  + +AL     L  L+L    +  AGA +IA+
Sbjct: 202 ALAEALRVNATLAVLYLRENRLGDAGAQAIAEALKSNTMLTFLDLWANQIGEAGAQAIAE 261

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            L  N+TL  + L  N+I   G     +A++    +++++++ N  G  G + +++
Sbjct: 262 ALKMNSTLIQLFLNGNQIGDFGAKAFAEALRVNMTVQRLDLTGNGIGNLGAQAIDE 317



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 80/161 (49%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ + GAK +A   K   TL ++ +  N I   G  A+++A + N  LR L L+ N I
Sbjct: 80  QNQIGDAGAKAIAEALKVNTTLTKLNLWANQIGEAGAQAIAEALKVNATLRTLYLDRNQI 139

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +AL    +L  L L       AG  +IAK L  N TL  +NL   +I   G
Sbjct: 140 GDAGAKAIAEALKVNATLRTLYLDRNQFGDAGVQAIAKALQVNKTLSWLNLIDKQIGDAG 199

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
              L +A++    L  + + EN+ G+ G + + + +KS  M
Sbjct: 200 AQALAEALRVNATLAVLYLRENRLGDAGAQAIAEALKSNTM 240



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 3/158 (1%)

Query: 304 RLENEGAKMLAAVFKKLK---TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           R +  G   + AV + LK   TL  ++M ++ +   G  A ++A E N  L  L LN N 
Sbjct: 23  RWDRLGVADVQAVAEGLKVNTTLTVLDMKEHHLDDDGAKAFAEALEVNTTLTELRLNQNQ 82

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I   GA  + +AL    +L  LNL    +  AGA +IA+ L  N TL  + L  N+I   
Sbjct: 83  IGDAGAKAIAEALKVNTTLTKLNLWANQIGEAGAQAIAEALKVNATLRTLYLDRNQIGDA 142

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           G   + +A+K    L+ + +  NQFG+ GV+ + K ++
Sbjct: 143 GAKAIAEALKVNATLRTLYLDRNQFGDAGVQAIAKALQ 180



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + +N     G+ A++ A + NK L  LNL D  I   GA  L +A
Sbjct: 147 IAEALKVNATLRTLYLDRNQFGDAGVQAIAKALQVNKTLSWLNLIDKQIGDAGAQALAEA 206

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +LA+L L +  L  AGA +IA+ L  NT L  ++L  N+I   G   + +A+K  
Sbjct: 207 LRVNATLAVLYLRENRLGDAGAQAIAEALKSNTMLTFLDLWANQIGEAGAQAIAEALKMN 266

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + L Q+ ++ NQ G+ G +   + ++
Sbjct: 267 STLIQLFLNGNQIGDFGAKAFAEALR 292



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 81/168 (48%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L+++GAK  A   +   TL  + + QN I   G  A+++A + N  L  LNL  N I   
Sbjct: 55  LDDDGAKAFAEALEVNTTLTELRLNQNQIGDAGAKAIAEALKVNTTLTKLNLWANQIGEA 114

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           GA  + +AL    +L  L L    +  AGA +IA+ L  N TL  + L  N+    G   
Sbjct: 115 GAQAIAEALKVNATLRTLYLDRNQIGDAGAKAIAEALKVNATLRTLYLDRNQFGDAGVQA 174

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           + KA++    L  +N+ + Q G+ G + + + ++     A L L ++ 
Sbjct: 175 IAKALQVNKTLSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENR 222



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + +N I   G  A+++A + N  LR L L+ N     G   + +A
Sbjct: 119 IAEALKVNATLRTLYLDRNQIGDAGAKAIAEALKVNATLRTLYLDRNQFGDAGVQAIAKA 178

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+ LNL D  +  AGA ++A+ L  N TL  + L  N +   G   + +A+K+ 
Sbjct: 179 LQVNKTLSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLGDAGAQAIAEALKSN 238

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  +++  NQ GE G + + + +K
Sbjct: 239 TMLTFLDLWANQIGEAGAQAIAEALK 264



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KTL  + +    I   G  AL++A   N  L  L L +N +   GA  + +AL     L 
Sbjct: 183 KTLSWLNLIDKQIGDAGAQALAEALRVNATLAVLYLRENRLGDAGAQAIAEALKSNTMLT 242

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L    +  AGA +IA+ L  N+TL  + L  N+I   G     +A++    ++++++
Sbjct: 243 FLDLWANQIGEAGAQAIAEALKMNSTLIQLFLNGNQIGDFGAKAFAEALRVNMTVQRLDL 302

Query: 130 SENQFGEEGVEEMEK 144
           + N  G  G + +++
Sbjct: 303 TGNGIGNLGAQAIDE 317


>gi|357444341|ref|XP_003592448.1| Ran GTPase-activating protein [Medicago truncatula]
 gi|355481496|gb|AES62699.1| Ran GTPase-activating protein [Medicago truncatula]
          Length = 533

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 119/236 (50%), Gaps = 13/236 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S  C  LEEL L N+G+        ++A+ +  
Sbjct: 211 GSVLKYLNLSDNALGEKGVRAFGTLLKSQSC--LEELYLMNDGISEEA----AQAVSELI 264

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA+ +A V K+   LE        I   G  ALSD
Sbjct: 265 PSTEK------LKVLHFHNNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSD 318

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A  +  +LR L+L DN +  +G + L +AL+K   L  + L    L+  GA +IA  L  
Sbjct: 319 ALGDCTHLRKLDLRDNMLGVEGGVSLSKALAKNAELREIYLSFLNLEDEGAIAIANALKA 378

Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +   LE + ++ N I+V     +   +  K  L ++N+SEN+  +EG  ++ K ++
Sbjct: 379 SAPRLEVLEMSGNNITVDAAPAIANCLAAKQFLAKLNLSENELKDEGAIQISKALE 434



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A + +  +L  L ++ N IT   A  +   L+    LA LNL +  LK  GA 
Sbjct: 368 GAIAIANALKASAPRLEVLEMSGNNITVDAAPAIANCLAAKQFLAKLNLSENELKDEGAI 427

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            I+K L   + L++++L+CN I+  G   L   +  K   +++++  N   +EG++E+  
Sbjct: 428 QISKALEGLSQLKEIDLSCNRITRDGAQQLALTVLQKVDFERLDIDGNFISDEGIKELMV 487

Query: 145 LM-KSFGMAAALVLEDDEGECSDEEQDEE 172
           +  KS      L   D +G+  DEE DEE
Sbjct: 488 IFEKSPDKLGPLDENDPDGKDGDEESDEE 516



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 154/380 (40%), Gaps = 67/380 (17%)

Query: 82  GASSIAK--YLTDNTTLEDVNLT-----CNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           GA+ +AK  +++    L++V+L+       E      + +  A    + LK +N+S+N  
Sbjct: 165 GAAEVAKPIFISLKDQLKEVDLSDFIAGRPEAEALDVMRIFSATLEGSVLKYLNLSDNAL 224

Query: 135 GEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSN 194
           GE+GV     L+KS      L L                   ND  +E     +S    +
Sbjct: 225 GEKGVRAFGTLLKSQSCLEELYLM------------------NDGISEEAAQAVSELIPS 266

Query: 195 HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
                    HNN          + + +K  + L +   S    G  G   L+D L    C
Sbjct: 267 TEKLKVLHFHNNMTGDEGARAIAEV-VKRSSCLEDFRCSSTRIGDEGGVALSDALGD--C 323

Query: 255 FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA 314
             L +L L +N LG+ G   LSKAL    E  +         ++++  N LE+EGA  +A
Sbjct: 324 THLRKLDLRDNMLGVEGGVSLSKALAKNAELRE---------IYLSFLN-LEDEGAIAIA 373

Query: 315 AVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
              K     LE +EM  N I      A+++     + L  LNL++N +  +GAI + +AL
Sbjct: 374 NALKASAPRLEVLEMSGNNITVDAAPAIANCLAAKQFLAKLNLSENELKDEGAIQISKAL 433

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
             L                            + L++++L+CN I+  G   L   +  K 
Sbjct: 434 EGL----------------------------SQLKEIDLSCNRITRDGAQQLALTVLQKV 465

Query: 434 KLKQINVSENQFGEEGVEEM 453
             +++++  N   +EG++E+
Sbjct: 466 DFERLDIDGNFISDEGIKEL 485



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K+   LE        I   G  ALSDA  +   LR L+L DN +  +G + L +A
Sbjct: 288 IAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKLDLRDNMLGVEGGVSLSKA 347

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           L+K   L  + L    L+  GA +IA  L  +   LE + ++ N I+V     +   +  
Sbjct: 348 LAKNAELREIYLSFLNLEDEGAIAIANALKASAPRLEVLEMSGNNITVDAAPAIANCLAA 407

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++N+SEN+  +EG  ++ K ++
Sbjct: 408 KQFLAKLNLSENELKDEGAIQISKALE 434



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 63/128 (49%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L+++ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +
Sbjct: 213 VLKYLNLSDNALGEKGVRAFGTLLKSQSCLEELYLMNDGISEEAAQAVSELIPSTEKLKV 272

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA+ +  ++ LED   +   I  +GG+ L  A+ + T L+++++ 
Sbjct: 273 LHFHNNMTGDEGARAIAEVVKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKLDLR 332

Query: 131 ENQFGEEG 138
           +N  G EG
Sbjct: 333 DNMLGVEG 340



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
              + K    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA  + + 
Sbjct: 232 FGTLLKSQSCLEELYLMNDGISEEAAQAVSELIPSTEKLKVLHFHNNMTGDEGARAIAEV 291

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + +   L         +   G  +++  L D T L  ++L  N + V+GG+ L KA+   
Sbjct: 292 VKRSSCLEDFRCSSTRIGDEGGVALSDALGDCTHLRKLDLRDNMLGVEGGVSLSKALAKN 351

Query: 122 TKLKQINVSENQFGEEG 138
            +L++I +S     +EG
Sbjct: 352 AELREIYLSFLNLEDEG 368


>gi|50294303|ref|XP_449563.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528877|emb|CAG62539.1| unnamed protein product [Candida glabrata]
          Length = 402

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 14/244 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  L+LSDNAFG   ++ L + + ++    L+ L L+NNG+G    + + KAL    ++
Sbjct: 109 KLTILNLSDNAFGLRTIDYLENYIANAV--HLKHLILSNNGMGPFAGERIGKALFYLAQN 166

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGI-TALSD 343
             K    + L+ FI GRNRLEN  A  LA   K     L+ V++ QNGI   G+ T +  
Sbjct: 167 KTKAKESM-LETFICGRNRLENGSALYLALGLKSHGDGLKVVKLYQNGIRPKGVATLIHY 225

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
             + N  L  ++L DNT T   ++ L + L     +L  LNL DCLLK+ G+  + K   
Sbjct: 226 GLKYNTKLEIIDLQDNTFTTAASLVLAKNLPLWKNTLVELNLNDCLLKAKGSKEVFKVFE 285

Query: 403 DNT--TLEDVNLTCNEISVQGGLDLV--KAMKNK--TKLKQINVSENQFGEEGVEEMEKL 456
           DNT   LE +    NE+  Q  L+ V   A+++    KLK + ++ N+F EE  + +  L
Sbjct: 286 DNTFENLETLRFEYNEME-QDTLETVFLPAIEDNKFPKLKNLEINGNRF-EEDSDPVNAL 343

Query: 457 MKSF 460
           M  F
Sbjct: 344 MDHF 347



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 10/146 (6%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    + N KL  ++L DNT T   ++ L + L     +L 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLKYNTKLEIIDLQDNTFTTAASLVLAKNLPLWKNTLV 263

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLDLV--KAMKNK--TK 123
            LNL DCLLK+ G+  + K   DNT   LE +    NE+  Q  L+ V   A+++    K
Sbjct: 264 ELNLNDCLLKAKGSKEVFKVFEDNTFENLETLRFEYNEME-QDTLETVFLPAIEDNKFPK 322

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSF 149
           LK + ++ N+F EE  + +  LM  F
Sbjct: 323 LKNLEINGNRF-EEDSDPVNALMDHF 347


>gi|115385048|ref|XP_001209071.1| ran GTPase-activating protein 1 [Aspergillus terreus NIH2624]
 gi|114196763|gb|EAU38463.1| ran GTPase-activating protein 1 [Aspergillus terreus NIH2624]
          Length = 414

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 115/240 (47%), Gaps = 13/240 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY---ESS 286
           ++LSDNAFG    + L D L  S    L  L LNNNG+G      ++ AL D     E +
Sbjct: 100 VNLSDNAFGQRMSKPLVDFL--SRHIPLRHLILNNNGMGPEAGAHIADALRDLAARKEEA 157

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITAL-SD 343
           +K G  +  L+  + GRNRLE+      A  ++     +  V+M QNGI   GI  L  +
Sbjct: 158 RKAGQEVPPLESIVCGRNRLESGSMAAWARAYEVNAAGMRSVKMTQNGIRQEGIVLLLRE 217

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA--SSIAKYL 401
                  L  L+L DNT T  G+  L   ++  P L  L + DCLL   G    + A   
Sbjct: 218 GLRHATALEVLDLQDNTFTVTGSTALADVVTSWPELRELGVSDCLLSGRGGVKLAKALAA 277

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE--EGVEEMEKLMK 458
             N  LE + +  NEI+ +G    + A K     L++I ++ N+F E  E V E+ ++++
Sbjct: 278 AKNGKLETLRMQYNEITAEGVKQFLHASKTALPSLRRIELNGNKFMEDDENVTELREILE 337



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 6/142 (4%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +  V+M QNGI   GI  L  +       L  L+L DNT T  G+  L   ++  P L  
Sbjct: 196 MRSVKMTQNGIRQEGIVLLLREGLRHATALEVLDLQDNTFTVTGSTALADVVTSWPELRE 255

Query: 71  LNLGDCLLKSAGA--SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L + DCLL   G    + A     N  LE + +  NEI+ +G    + A K     L++I
Sbjct: 256 LGVSDCLLSGRGGVKLAKALAAAKNGKLETLRMQYNEITAEGVKQFLHASKTALPSLRRI 315

Query: 128 NVSENQFGE--EGVEEMEKLMK 147
            ++ N+F E  E V E+ ++++
Sbjct: 316 ELNGNKFMEDDENVTELREILE 337



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 42/229 (18%)

Query: 259 ELKLNNNGLGITGCKLLSKALH-----------DCYESSKKEGSPLALKVFIAGRNRLEN 307
           E++L  N  GIT C+ ++ AL            D + S   E  P AL            
Sbjct: 37  EVRLGGNTFGITACERIAAALAPQKSLEVAEFADIFTSRLIEEIPEAL------------ 84

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
               +L A+ + + TL  V +  N         L D    +  LRHL LN+N +  +   
Sbjct: 85  --THLLNALLE-IPTLHTVNLSDNAFGQRMSKPLVDFLSRHIPLRHLILNNNGMGPEAGA 141

Query: 368 PLGQALSKL--------------PSLAILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNL 412
            +  AL  L              P L  +  G   L+S   ++ A+ Y  +   +  V +
Sbjct: 142 HIADALRDLAARKEEARKAGQEVPPLESIVCGRNRLESGSMAAWARAYEVNAAGMRSVKM 201

Query: 413 TCNEISVQGGLDLVK-AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           T N I  +G + L++  +++ T L+ +++ +N F   G   +  ++ S+
Sbjct: 202 TQNGIRQEGIVLLLREGLRHATALEVLDLQDNTFTVTGSTALADVVTSW 250


>gi|426380990|ref|XP_004057140.1| PREDICTED: protein NLRC3 isoform 1 [Gorilla gorilla gorilla]
          Length = 1065

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 197/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K            ++G    E  D +S   +D+        L  N
Sbjct: 788  NSIGDGGAKALAEALKV-----------NQGL---ESLDLQSNSISDAGVAALMGALCTN 833

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L L +N+  P G + +A  LR+
Sbjct: 834  QT---------------------------------LLSLSLRENSISPEGAQAIAHALRA 860

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +      +  + L L+      N ++   A+
Sbjct: 861  NS--TLKNLDLTANLLHDQGARAIAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQ 908

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+
Sbjct: 909  ALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGE 968

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 969  ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG 1028

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  G+ G   + + +K+
Sbjct: 1029 NHRLQHINLQGNHIGDSGARMISEAIKT 1056



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 171/421 (40%), Gaps = 83/421 (19%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 694  RSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++ L+ N I   G   L +A+K    L+ +++
Sbjct: 754  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 813

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 814  QSNSISDAGV---AALMGAL--------------CTNQTLLSLSLRENSISPEGAQAIAH 856

Query: 184  ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KT 223
                NS L + D  +N  H+   ++   + + + T    H+                 + 
Sbjct: 857  ALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQL 916

Query: 224  GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
               L  LDL +NA G  G            C     LK+N              AL   Y
Sbjct: 917  NRSLTSLDLQENAIGDDGA-----------CAVARALKVNT-------------ALTALY 952

Query: 284  ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                  G+P                GA++L       +TLE +++  N I   G  AL++
Sbjct: 953  LQVASIGAP----------------GAQVLGEALAVNRTLEILDLRGNAIGVAGAKALAN 996

Query: 344  AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  
Sbjct: 997  ALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1056

Query: 404  N 404
            N
Sbjct: 1057 N 1057



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +   G + +++AL
Sbjct: 689 SLLVNRSLTSLDLRSNSIGPQGAKALADALKIN--RTLTSLSLQGNTVRDDGARSMAEAL 746

Query: 280 HDCYESS-----KKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                 S     K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 747 ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQ 806

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  
Sbjct: 807 GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKN 866

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 867 LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 926

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G++G   + + +K      AL L+
Sbjct: 927 ENAIGDDGACAVARALKVNTALTALYLQ 954



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 647 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSI 706

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 707 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 766

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++ +S N  G+ G + + + +K
Sbjct: 767 AQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALK 803



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 798 LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 857

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 858 LRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 917

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G++G   + + +K      AL L+
Sbjct: 918 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 954



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 882  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 941

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + + GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 942  LKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1001

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1002 SSLRRLNLQENSLGMDG 1018



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 69/131 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 770 MADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 829

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 830 LCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVREN 889

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 890 RTLTSLHLQWN 900


>gi|326679847|ref|XP_002666753.2| PREDICTED: protein NLRC3-like [Danio rerio]
          Length = 1127

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 176/415 (42%), Gaps = 69/415 (16%)

Query: 40   LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
            ++ L+L DN+I+ KG  PL +AL    +L  L+L    + + GA ++ + L  N  L  V
Sbjct: 730  IQMLSLADNSISSKGVKPLSRALLVNRTLTTLDLRGNNIGAKGAKTLCEALKLNQFLVSV 789

Query: 100  NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
            NL  N I  +G   L + +++  KL  +NV +N  G EG   M+K+              
Sbjct: 790  NLQNNHIEDEGARSLSEVLQSNRKLTTLNVQKNGIGPEG---MKKI-------------- 832

Query: 160  DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM 219
                                 AEG   N +  D N S N     H     +   +     
Sbjct: 833  ---------------------AEGLIKNQTLQDFNVSSN-----HLGDLGTVALAQ---- 862

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSS---CCFALEELKLNNNGLGITGCKLLS 276
            +L     L  L L  N+    G++ L+  L+S+   CC  L E     N +G+ G K ++
Sbjct: 863  ALMVNHVLHTLSLQSNSVSDRGIKALSHALQSNRGLCCLNLRE-----NSIGVAGAKDIA 917

Query: 277  KAL--HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
            KAL  + C            L+      N L +EG   +A   +  +++  + +  N + 
Sbjct: 918  KALKVNTC------------LRELDLTANLLHDEGVTAIAEAMRVNRSISSLHLQWNFMK 965

Query: 335  HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
                 AL+++   N  ++ L+L +N +   G I L  AL    SL +L L       +GA
Sbjct: 966  AGAAKALAESLSSNTCIQLLDLQENALGDNGVIALAAALMSNSSLTVLYLQGVSAGKSGA 1025

Query: 395  SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             ++A  +  N TL  ++L  N I ++G      A+KN   L+ +N+ EN  G +G
Sbjct: 1026 VALADAMVVNKTLHTLDLRGNSIGMEGAKAFSSALKNNRSLRSLNLQENSLGMDG 1080



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 164/376 (43%), Gaps = 33/376 (8%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  +++  N I   G   L +A + N+ L  +NL +N I  +GA  L + L     L 
Sbjct: 756  RTLTTLDLRGNNIGAKGAKTLCEALKLNQFLVSVNLQNNHIEDEGARSLSEVLQSNRKLT 815

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             LN+    +   G   IA+ L  N TL+D N++ N +   G + L +A+     L  +++
Sbjct: 816  TLNVQKNGIGPEGMKKIAEGLIKNQTLQDFNVSSNHLGDLGTVALAQALMVNHVLHTLSL 875

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD-NSNL 188
              N   + G++ +   ++S      L L ++    +  +   ++ + N    E D  +NL
Sbjct: 876  QSNSVSDRGIKALSHALQSNRGLCCLNLRENSIGVAGAKDIAKALKVNTCLRELDLTANL 935

Query: 189  SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
             H++   +   + + + + +  H   N     +K GA                 + LA+ 
Sbjct: 936  LHDEGVTAIAEAMRVNRSISSLHLQWN----FMKAGA----------------AKALAES 975

Query: 249  LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
            L S+ C  L  L L  N LG  G   L+ AL      S    + L L+   AG++     
Sbjct: 976  LSSNTCIQL--LDLQENALGDNGVIALAAALM-----SNSSLTVLYLQGVSAGKS----- 1023

Query: 309  GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
            GA  LA      KTL  +++  N I   G  A S A + N++LR LNL +N++   GAI 
Sbjct: 1024 GAVALADAMVVNKTLHTLDLRGNSIGMEGAKAFSSALKNNRSLRSLNLQENSLGMDGAIF 1083

Query: 369  LGQALSKLPSLAILNL 384
            +  AL     L  +NL
Sbjct: 1084 IATALRGNHQLTYINL 1099



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L L+DN+    GV+ L+  L  +    L  L L  N +G  G K L +AL          
Sbjct: 733 LSLADNSISSKGVKPLSRALLVN--RTLTTLDLRGNNIGAKGAKTLCEALK--------- 781

Query: 290 GSPLALKVFIAG----RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                L  F+       N +E+EGA+ L+ V +  + L  + + +NGI   G+  +++  
Sbjct: 782 -----LNQFLVSVNLQNNHIEDEGARSLSEVLQSNRKLTTLNVQKNGIGPEGMKKIAEGL 836

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
            +N+ L+  N++ N +   G + L QAL     L  L+L    +   G  +++  L  N 
Sbjct: 837 IKNQTLQDFNVSSNHLGDLGTVALAQALMVNHVLHTLSLQSNSVSDRGIKALSHALQSNR 896

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  +NL  N I V G  D+ KA+K  T L++++++ N   +EGV  + + M+
Sbjct: 897 GLCCLNLRENSIGVAGAKDIAKALKVNTCLRELDLTANLLHDEGVTAIAEAMR 949



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 21/248 (8%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            +LK    LV ++L +N     G   L+++L+S+    L  L +  NG+G  G K +++ L
Sbjct: 779  ALKLNQFLVSVNLQNNHIEDEGARSLSEVLQSN--RKLTTLNVQKNGIGPEGMKKIAEGL 836

Query: 280  HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K +     L+ F    N L + G   LA        L  + +  N +   GI 
Sbjct: 837  ------IKNQ----TLQDFNVSSNHLGDLGTVALAQALMVNHVLHTLSLQSNSVSDRGIK 886

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            ALS A + N+ L  LNL +N+I   GA  + +AL     L  L+L   LL   G ++IA+
Sbjct: 887  ALSHALQSNRGLCCLNLRENSIGVAGAKDIAKALKVNTCLRELDLTANLLHDEGVTAIAE 946

Query: 400  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +  N ++  ++L  N +       L +++ + T ++ +++ EN  G+ GV         
Sbjct: 947  AMRVNRSISSLHLQWNFMKAGAAKALAESLSSNTCIQLLDLQENALGDNGV--------- 997

Query: 460  FGMAAALV 467
              +AAAL+
Sbjct: 998  IALAAALM 1005



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 144/353 (40%), Gaps = 47/353 (13%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            L+ V +  + L  + + +NGI   G+  +++   +N+ L+  N++ N +   G + L QA
Sbjct: 804  LSEVLQSNRKLTTLNVQKNGIGPEGMKKIAEGLIKNQTLQDFNVSSNHLGDLGTVALAQA 863

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L     L  L+L    +   G  +++  L  N  L  +NL  N I V G  D+ KA+K  
Sbjct: 864  LMVNHVLHTLSLQSNSVSDRGIKALSHALQSNRGLCCLNLRENSIGVAGAKDIAKALKVN 923

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN---- 177
            T L++++++ N   +EGV  + + M+     ++L L+ +  +    +   ES   N    
Sbjct: 924  TCLRELDLTANLLHDEGVTAIAEAMRVNRSISSLHLQWNFMKAGAAKALAESLSSNTCIQ 983

Query: 178  ----DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
                  +A GDN  ++                              +L + + L  L L 
Sbjct: 984  LLDLQENALGDNGVIALA---------------------------AALMSNSSLTVLYLQ 1016

Query: 234  DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
              + G  G   LAD +  +    L  L L  N +G+ G K  S AL +            
Sbjct: 1017 GVSAGKSGAVALADAMVVN--KTLHTLDLRGNSIGMEGAKAFSSALKNNR---------- 1064

Query: 294  ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            +L+      N L  +GA  +A   +    L  + +  NGI   G   +SDA +
Sbjct: 1065 SLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIK 1117



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 75/157 (47%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + ++G K L+      +TL  +++  N I   G   L +A + N+ L  +NL +N I 
Sbjct: 738 NSISSKGVKPLSRALLVNRTLTTLDLRGNNIGAKGAKTLCEALKLNQFLVSVNLQNNHIE 797

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA  L + L     L  LN+    +   G   IA+ L  N TL+D N++ N +   G 
Sbjct: 798 DEGARSLSEVLQSNRKLTTLNVQKNGIGPEGMKKIAEGLIKNQTLQDFNVSSNHLGDLGT 857

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L +A+     L  +++  N   + G++ +   ++S
Sbjct: 858 VALAQALMVNHVLHTLSLQSNSVSDRGIKALSHALQS 894



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 66/137 (48%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ +++ +N +   G+ AL+ A   N  L  L L   +    GA+ L  A+    +L  L
Sbjct: 982  IQLLDLQENALGDNGVIALAAALMSNSSLTVLYLQGVSAGKSGAVALADAMVVNKTLHTL 1041

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    +   GA + +  L +N +L  +NL  N + + G + +  A++   +L  IN+  
Sbjct: 1042 DLRGNSIGMEGAKAFSSALKNNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQG 1101

Query: 132  NQFGEEGVEEMEKLMKS 148
            N  GE G + +   +K+
Sbjct: 1102 NGIGESGAKVVSDAIKA 1118


>gi|410985304|ref|XP_003998963.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Felis catus]
          Length = 1064

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 194/449 (43%), Gaps = 61/449 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 667  IQRISLAENQISNKGAKALARSLLVNRSLTALDLRGNSIGPQGAKALADALKINRTLAFL 726

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L +  ++  GA  +A+ L  N TL  ++L  N I   G      A+K    LK++  S 
Sbjct: 727  SLQNNAIRDNGARFVAEALAANRTLSVLHLQKNTIGPLGAQQTADALKQNRSLKELIFSS 786

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G++G E + K +K            ++G    E  D +S   +D+        L  N
Sbjct: 787  NSIGDKGAEALAKALKV-----------NQGL---ESLDLQSNSISDAGVAALMGALCTN 832

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L+L +N+   I  EG  DL ++
Sbjct: 833  QT---------------------------------LISLNLRENS---ISSEGARDLAQA 856

Query: 252  SCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
             C    L+ L L  N L   G + ++ A+ +            AL       N ++   A
Sbjct: 857  LCSNSTLKNLDLTANLLHDQGAQAVALAVRENR----------ALTSLHLQWNFIQAGAA 906

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            K L    +  ++L  +++ +N I   G +AL+ A + N  L  L L   +I  +GA  LG
Sbjct: 907  KALGQALQLNRSLTSLDLQENAIGDEGASALASALKANTALTALYLQVASIGARGAQALG 966

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+ 
Sbjct: 967  DALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGVICVATALS 1026

Query: 431  NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                L+ IN+  N  GE G   + + +K+
Sbjct: 1027 GNHSLQHINLQGNHIGESGARMISEAIKT 1055



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 160/373 (42%), Gaps = 60/373 (16%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  + + +N I  +G    +DA ++N+ L+ L  + N+I  KGA  L +AL     L 
Sbjct: 749  RTLSVLHLQKNTIGPLGAQQTADALKQNRSLKELIFSSNSIGDKGAEALAKALKVNQGLE 808

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +  AG +++   L  N TL  +NL  N IS +G  DL +A+ + + LK +++
Sbjct: 809  SLDLQSNSISDAGVAALMGALCTNQTLISLNLRENSISSEGARDLAQALCSNSTLKNLDL 868

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   ++G +           A AL + ++    S                        
Sbjct: 869  TANLLHDQGAQ-----------AVALAVRENRALTS-----------------------L 894

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
            H   N     + ++   + Q + +             L  LDL +NA G  G   LA  L
Sbjct: 895  HLQWNFIQAGAAKALGQALQLNRS-------------LTSLDLQENAIGDEGASALASAL 941

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            +++   AL  L L    +G  G    ++AL D    ++       L++     N +   G
Sbjct: 942  KANT--ALTALYLQVASIGARG----AQALGDALAVNR------TLEILDLRGNAIGVAG 989

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            AK LA   K   +L R+ + +N +   G+  ++ A   N +L+H+NL  N I   GA  +
Sbjct: 990  AKALANALKVNSSLRRLNLQENSLGMDGVICVATALSGNHSLQHINLQGNHIGESGARMI 1049

Query: 370  GQAL-SKLPSLAI 381
             +A+ +  PS  +
Sbjct: 1050 SEAIKTNAPSCTV 1062



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++R+ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 646 NQFQDPVMELLGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTALDLRGNSI 705

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +LA L+L +  ++  GA  +A+ L  N TL  ++L  N I   G
Sbjct: 706 GPQGAKALADALKINRTLAFLSLQNNAIRDNGARFVAEALAANRTLSVLHLQKNTIGPLG 765

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
                 A+K    LK++  S N  G++G E + K +K
Sbjct: 766 AQQTADALKQNRSLKELIFSSNSIGDKGAEALAKALK 802



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 70/137 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE +++  N I   G+ AL  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 797 LAKALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLISLNLRENSISSEGARDLAQA 856

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA ++A  + +N  L  ++L  N I       L +A++  
Sbjct: 857 LCSNSTLKNLDLTANLLHDQGAQAVALAVRENRALTSLHLQWNFIQAGAAKALGQALQLN 916

Query: 122 TKLKQINVSENQFGEEG 138
             L  +++ EN  G+EG
Sbjct: 917 RSLTSLDLQENAIGDEG 933


>gi|354493274|ref|XP_003508768.1| PREDICTED: protein NLRC3 [Cricetulus griseus]
          Length = 1088

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 194/450 (43%), Gaps = 63/450 (14%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++++ + +N I + G  AL+ +   N+ L  L+L  N I  +GA  L  AL K  +L  L
Sbjct: 691  IQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSL 750

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
             L   ++K  G   +A+ L  N T+  + L  N I   G   +  A+K    LK++  S 
Sbjct: 751  GLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSS 810

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G            MA A  L+ ++G                     +N +L  N
Sbjct: 811  NTIGDGG-----------AMALAEALKGNQGL--------------------ENLDLQSN 839

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
              +++  A        NQ+                L  L+L +N+  P G + LA  L  
Sbjct: 840  AISNTGVAVLMRALCVNQT----------------LSSLNLRENSISPEGAQALAQAL-- 881

Query: 252  SCCF--ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
              C    L+ L L  N L   G + ++ A+ + +  +      L L+      N ++   
Sbjct: 882  --CMNNTLKHLDLTANLLHDQGAQAIAVAVGENHSLTH-----LHLQ-----WNFIQAGA 929

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            A+ L    +  +TL  +++ +N I   G +A++ A + N  L  L L   +I  +GA  L
Sbjct: 930  ARALGQALQLNRTLTTLDLQENAIGDEGASAVAGALKVNTTLTALYLQVASIGTQGAQAL 989

Query: 370  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            G+AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+
Sbjct: 990  GEALAVNRTLEILDLRGNDIGVAGAKALANALKLNSSLRRLNLQENSLGMDGAIYVAAAL 1049

Query: 430  KNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                 L  IN+  N  GE G   + + +K+
Sbjct: 1050 SENHGLHHINLQGNPIGESGARMISEAIKT 1079



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 124/276 (44%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSS------------------CCFA----- 256
           SL     L+ LDL  NA GP G + LAD L+ +                   C A     
Sbjct: 712 SLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVS 771

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              +  L+L  N +G TG + ++ AL       K+  S   LK  +   N + + GA  L
Sbjct: 772 NQTISILQLQKNLIGPTGAQRMADAL-------KQNKS---LKELMFSSNTIGDGGAMAL 821

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + LE +++  N I + G+  L  A   N+ L  LNL +N+I+ +GA  L QAL
Sbjct: 822 AEALKGNQGLENLDLQSNAISNTGVAVLMRALCVNQTLSSLNLRENSISPEGAQALAQAL 881

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++   
Sbjct: 882 CMNNTLKHLDLTANLLHDQGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNR 941

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 942 TLTTLDLQENAIGDEGASAVAGALKVNTTLTALYLQ 977



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 173/399 (43%), Gaps = 39/399 (9%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA ++N+ L  L L  N I   G + + +AL    +++
Sbjct: 717  RSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVSNQTIS 776

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL L   L+   GA  +A  L  N +L+++  + N I   G + L +A+K    L+ +++
Sbjct: 777  ILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALKGNQGLENLDL 836

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS--- 186
              N     GV     LM++               C ++     +  EN    EG  +   
Sbjct: 837  QSNAISNTGVA---VLMRAL--------------CVNQTLSSLNLRENSISPEGAQALAQ 879

Query: 187  NLSHNDS-NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
             L  N++  H    +N  H+   Q+   +   + SL        L L  N         L
Sbjct: 880  ALCMNNTLKHLDLTANLLHDQGAQAIAVAVGENHSL------THLHLQWNFIQAGAARAL 933

Query: 246  ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
               L+ +    L  L L  N +G  G   ++ AL       K   +  AL + +A    +
Sbjct: 934  GQALQLN--RTLTTLDLQENAIGDEGASAVAGAL-------KVNTTLTALYLQVAS---I 981

Query: 306  ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
              +GA+ L       +TLE +++  N I   G  AL++A + N +LR LNL +N++   G
Sbjct: 982  GTQGAQALGEALAVNRTLEILDLRGNDIGVAGAKALANALKLNSSLRRLNLQENSLGMDG 1041

Query: 366  AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            AI +  ALS+   L  +NL    +  +GA  I++ +  N
Sbjct: 1042 AIYVAAALSENHGLHHINLQGNPIGESGARMISEAIKTN 1080



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE++++  N I + G+  L  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 821 LAEALKGNQGLENLDLQSNAISNTGVAVLMRALCVNQTLSSLNLRENSISPEGAQALAQA 880

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++  
Sbjct: 881 LCMNNTLKHLDLTANLLHDQGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLN 940

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 941 RTLTTLDLQENAIGDEGASAVAGALKVNTTLTALYLQ 977



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 53/119 (44%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   K   TL  + +    I   G  AL +A   N+ L  L+L  N I   GA  L  A
Sbjct: 961  VAGALKVNTTLTALYLQVASIGTQGAQALGEALAVNRTLEILDLRGNDIGVAGAKALANA 1020

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L    SL  LNL +  L   GA  +A  L++N  L  +NL  N I   G   + +A+K 
Sbjct: 1021 LKLNSSLRRLNLQENSLGMDGAIYVAAALSENHGLHHINLQGNPIGESGARMISEAIKT 1079


>gi|426380992|ref|XP_004057141.1| PREDICTED: protein NLRC3 isoform 2 [Gorilla gorilla gorilla]
          Length = 1112

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 197/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 715  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSL 774

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 775  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 834

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K            ++G    E  D +S   +D+        L  N
Sbjct: 835  NSIGDGGAKALAEALKV-----------NQGL---ESLDLQSNSISDAGVAALMGALCTN 880

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L L +N+  P G + +A  LR+
Sbjct: 881  QT---------------------------------LLSLSLRENSISPEGAQAIAHALRA 907

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +      +  + L L+      N ++   A+
Sbjct: 908  NS--TLKNLDLTANLLHDQGARAIAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQ 955

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+
Sbjct: 956  ALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGE 1015

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 1016 ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG 1075

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  G+ G   + + +K+
Sbjct: 1076 NHRLQHINLQGNHIGDSGARMISEAIKT 1103



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 171/421 (40%), Gaps = 83/421 (19%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 741  RSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 800

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++ L+ N I   G   L +A+K    L+ +++
Sbjct: 801  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 860

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 861  QSNSISDAGV---AALMGAL--------------CTNQTLLSLSLRENSISPEGAQAIAH 903

Query: 184  ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KT 223
                NS L + D  +N  H+   ++   + + + T    H+                 + 
Sbjct: 904  ALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQL 963

Query: 224  GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
               L  LDL +NA G  G            C     LK+N              AL   Y
Sbjct: 964  NRSLTSLDLQENAIGDDGA-----------CAVARALKVNT-------------ALTALY 999

Query: 284  ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                  G+P                GA++L       +TLE +++  N I   G  AL++
Sbjct: 1000 LQVASIGAP----------------GAQVLGEALAVNRTLEILDLRGNAIGVAGAKALAN 1043

Query: 344  AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  
Sbjct: 1044 ALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1103

Query: 404  N 404
            N
Sbjct: 1104 N 1104



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +   G + +++AL
Sbjct: 736  SLLVNRSLTSLDLRSNSIGPQGAKALADALKIN--RTLTSLSLQGNTVRDDGARSMAEAL 793

Query: 280  HDCYESS-----KKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                  S     K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 794  ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQ 853

Query: 322  TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
             LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  
Sbjct: 854  GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKN 913

Query: 382  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
            L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 914  LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 973

Query: 442  ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            EN  G++G   + + +K      AL L+
Sbjct: 974  ENAIGDDGACAVARALKVNTALTALYLQ 1001



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 694 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSI 753

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 754 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 813

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++ +S N  G+ G + + + +K
Sbjct: 814 AQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALK 850



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 845  LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 904

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 905  LRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 964

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
              L  +++ EN  G++G   + + +K      AL L+
Sbjct: 965  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 1001



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 929  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 988

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + + GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 989  LKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1048

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1049 SSLRRLNLQENSLGMDG 1065



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 69/131 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 817 MADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 876

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 877 LCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVREN 936

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 937 RTLTSLHLQWN 947


>gi|323303449|gb|EGA57244.1| Rna1p [Saccharomyces cerevisiae FostersB]
          Length = 407

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 94/173 (54%), Gaps = 6/173 (3%)

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
           SDNAFG   +E L D +  +    ++ L L+NNG+G    + + KAL    ++ K    P
Sbjct: 116 SDNAFGLRTIELLEDYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAASKP 173

Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEENKN 350
             L+ FI GRNRLEN  A  LA   K   + L+ V++ QNGI   G+ T +    +  KN
Sbjct: 174 F-LETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQYLKN 232

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
           L  L+L DNT T   ++ L +AL     SL  LNL DCLLK+AG+  + K  T
Sbjct: 233 LEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFT 285



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L  L+L DNT T   ++ L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTWKDSLF 263

Query: 70  ILNLGDCLLKSAGASSIAKYLT 91
            LNL DCLLK+AG+  + K  T
Sbjct: 264 ELNLNDCLLKTAGSDEVFKVFT 285


>gi|367052877|ref|XP_003656817.1| hypothetical protein THITE_2121985 [Thielavia terrestris NRRL 8126]
 gi|347004082|gb|AEO70481.1| hypothetical protein THITE_2121985 [Thielavia terrestris NRRL 8126]
          Length = 421

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 111/231 (48%), Gaps = 18/231 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDCYESS 286
           ++L+DNAFG      L   L  S    L+ L LNNNGLG     L++ AL   H   E +
Sbjct: 101 INLNDNAFGLNTQAPLVAFL--SAHVPLQHLYLNNNGLGPHAGILIADALSELHARKEEA 158

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
           +K+G  +  L+  I GRNRLEN      A  F+    +  V+M QNGI   GI+  LS+ 
Sbjct: 159 RKQGQVVPDLETVICGRNRLENGSMTAWAKAFRLHNRVREVKMVQNGIRQEGISHLLSEG 218

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL--T 402
                 L  L+L DNT T  GA  L         L  L + D LL + G   +AK L   
Sbjct: 219 LRHASRLEVLDLQDNTFTLLGARALAAVAPGWADLVELGVSDSLLGAKGGVLLAKALGKG 278

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-----LKQINVSENQFGEE 448
            N  L+ + L  NEI+ QG    VKA+          L+++ ++ N+F EE
Sbjct: 279 KNKKLQILRLQYNEITAQG----VKALAEAAAEALPVLRKLELNGNKFTEE 325



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 16/172 (9%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           A  F+    +  V+M QNGI   GI+  LS+      +L  L+L DNT T  GA  L   
Sbjct: 187 AKAFRLHNRVREVKMVQNGIRQEGISHLLSEGLRHASRLEVLDLQDNTFTLLGARALAAV 246

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL--TDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
                 L  L + D LL + G   +AK L    N  L+ + L  NEI+ QG    VKA+ 
Sbjct: 247 APGWADLVELGVSDSLLGAKGGVLLAKALGKGKNKKLQILRLQYNEITAQG----VKALA 302

Query: 120 NKTK-----LKQINVSENQFGEE--GVEEMEKLMKSF--GMAAALVLEDDEG 162
                    L+++ ++ N+F EE   +  ++ L ++     A  +V+EDD G
Sbjct: 303 EAAAEALPVLRKLELNGNKFTEEDDSIIALQDLFEARKEKQAGDVVVEDDWG 354


>gi|320165782|gb|EFW42681.1| hypothetical protein CAOG_07813 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 12/253 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  LDL +N  G +G    A+ L+ +   AL E++L  N +G  G + ++KAL
Sbjct: 43  ALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNK--ALAEIRLWANQIGEVGAQAIAKAL 100

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      +   L     G N+L + GA+ +A   +   TL ++ + +N I  VG  
Sbjct: 101 K----------ANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVGAQ 150

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + NK L  L+L  N I   GA  + +AL    +L  L+L    +   GA +IA+
Sbjct: 151 AIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDVGAQAIAE 210

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  NTTL+ + L  N+I   G   + +A+K    L ++++ +NQ G+ G + + + +K+
Sbjct: 211 ALKVNTTLKQLYLWQNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQAIAESLKA 270

Query: 460 FGMAAALVLEDDE 472
                 L L D++
Sbjct: 271 NTTLGTLSLGDNQ 283



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 149/326 (45%), Gaps = 33/326 (10%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           A +IA+ L  N TL  ++L  N+I   G L   +A+K    L +I +  NQ GE G + +
Sbjct: 37  AKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLWANQIGEVGAQAI 96

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
            K +K+      L L         E Q  ++  +  ++A   N+ L             +
Sbjct: 97  AKALKANTTLGTLYL--------GENQLGDAGAQAIAEALQVNTTLP------------K 136

Query: 203 SHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK 261
            +   NQ  +   Q+   +LK    L  L L  N  G +G + +A+ L+ +    L EL 
Sbjct: 137 LYLRENQIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKT--LTELS 194

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
           L  N +G  G + +++AL               LK     +N++ + GA  +A   K  K
Sbjct: 195 LWQNQIGDVGAQAIAEALK----------VNTTLKQLYLWQNQIGDVGANAIAEALKVNK 244

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           TL R+++ +N I  VG  A++++ + N  L  L+L DN I   GA  + +AL+   +L  
Sbjct: 245 TLTRLDLYKNQIGDVGAQAIAESLKANTTLGTLSLGDNQIGDAGAQAIAEALNVNTTLTE 304

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTL 407
           L LG+  +   GA +IA+ L  N TL
Sbjct: 305 LYLGENQIGDVGAQAIAEALKVNKTL 330



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L L +N  G  G + +A+ L+ +    L +L L  N +G  G + +++AL
Sbjct: 99  ALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTT--LPKLYLRENQIGDVGAQAIAEAL 156

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L+L      +N++ + GA+ +A   K  KTL  + + QN I  VG  
Sbjct: 157 K-----VNKTLTTLSLY-----QNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDVGAQ 206

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + N  L+ L L  N I   GA  + +AL    +L  L+L    +   GA +IA+
Sbjct: 207 AIAEALKVNTTLKQLYLWQNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDVGAQAIAE 266

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NTTL  ++L  N+I   G   + +A+   T L ++ + ENQ G+ G + + + +K
Sbjct: 267 SLKANTTLGTLSLGDNQIGDAGAQAIAEALNVNTTLTELYLGENQIGDVGAQAIAEALK 325



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 33/323 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL ++++  N I  VG  A ++A + NK L  + L  N I   GA  + +A
Sbjct: 40  IAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLWANQIGEVGAQAIAKA 99

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L LG+  L  AGA +IA+ L  NTTL  + L  N+I   G   + +A+K  
Sbjct: 100 LKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVGAQAIAEALKVN 159

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L  +++ +NQ G+ G + + + +K       L L  ++                    
Sbjct: 160 KTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQ-------------------- 199

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNT-SNQSHMSLKTGARLVELDLSDNAFGPI 240
            GD    +  ++   +    Q +   NQ  +  +N    +LK    L  LDL  N  G +
Sbjct: 200 IGDVGAQAIAEALKVNTTLKQLYLWQNQIGDVGANAIAEALKVNKTLTRLDLYKNQIGDV 259

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G + +A+ L+++    L  L L +N +G  G + +++AL+              L     
Sbjct: 260 GAQAIAESLKANTT--LGTLSLGDNQIGDAGAQAIAEALN----------VNTTLTELYL 307

Query: 301 GRNRLENEGAKMLAAVFKKLKTL 323
           G N++ + GA+ +A   K  KTL
Sbjct: 308 GENQIGDVGAQAIAEALKVNKTL 330



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 83/157 (52%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           R ++ +E AK +A   K  KTL  +++  N I  VG  A ++A + NK L  + L  N I
Sbjct: 29  RRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLWANQI 88

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +AL    +L  L LG+  L  AGA +IA+ L  NTTL  + L  N+I   G
Sbjct: 89  GEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVG 148

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              + +A+K    L  +++ +NQ G+ G + + + +K
Sbjct: 149 AQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALK 185



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 41/332 (12%)

Query: 42  HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
            LNL    I  + A  + +AL    +L  L+L +  +   GA + A+ L  N  L ++ L
Sbjct: 24  QLNLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRL 83

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             N+I   G   + KA+K  T L  + + ENQ G+ G + + + ++       L L +++
Sbjct: 84  WANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQ 143

Query: 162 GECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-S 220
                           D  A+     L  N +  + +         NQ  +   Q+   +
Sbjct: 144 --------------IGDVGAQAIAEALKVNKTLTTLSLY------QNQIGDVGAQAIAEA 183

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L EL L  N  G +G + +A+ L+ +    L++L L  N +G  G   +++AL 
Sbjct: 184 LKVNKTLTELSLWQNQIGDVGAQAIAEALKVNTT--LKQLYLWQNQIGDVGANAIAEALK 241

Query: 281 --------DCYESSKKEGSPLA----------LKVFIAGRNRLENEGAKMLAAVFKKLKT 322
                   D Y++   +    A          L     G N++ + GA+ +A       T
Sbjct: 242 VNKTLTRLDLYKNQIGDVGAQAIAESLKANTTLGTLSLGDNQIGDAGAQAIAEALNVNTT 301

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L  + + +N I  VG  A+++A + NK L  L
Sbjct: 302 LTELYLGENQIGDVGAQAIAEALKVNKTLTTL 333



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)

Query: 345 FEENKNLR-HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           +++ KN    LNL    I  + A  + +AL    +L  L+L +  +   GA + A+ L  
Sbjct: 15  YDQVKNASGQLNLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKV 74

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N  L ++ L  N+I   G   + KA+K  T L  + + ENQ G+ G + + + ++
Sbjct: 75  NKALAEIRLWANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQ 129


>gi|301779075|ref|XP_002924946.1| PREDICTED: protein NLRC3-like [Ailuropoda melanoleuca]
          Length = 1066

 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 195/449 (43%), Gaps = 61/449 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 669  IQRISLAENQIGNKGAKALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFL 728

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +   +K    LK++  S 
Sbjct: 729  SLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSS 788

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G E           A A+ L+ ++G    E  D +S   +D+        L  N
Sbjct: 789  NSIGDGGAE-----------ALAMALKVNQGL---ESLDLQSNSISDAGVAALMGALCAN 834

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L+L +N+   I  EG  +L R+
Sbjct: 835  QT---------------------------------LISLNLRENS---ISSEGARELARA 858

Query: 252  SCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
             C    L+ L L  N L   G + ++ A+ +            AL       N ++   A
Sbjct: 859  LCINCTLKNLDLTANLLQDQGAQAIAVAMRENQ----------ALTSLHLQWNFIQAGAA 908

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            K L    +  ++L  +++ +N I   G +A++ A + N  L  L L   +I  +GA  LG
Sbjct: 909  KALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGSRGAQALG 968

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             AL+   +L IL+L    + +AGA ++A  L  N++L  +NL  N + + G + +  A+ 
Sbjct: 969  DALAVNKTLEILDLRGNTIGAAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALS 1028

Query: 431  NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                L+ IN+  N  GE G   + + +++
Sbjct: 1029 GNHSLQHINLQGNHIGESGARMISEAIRT 1057



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +   A   L L +N +   G + +++AL
Sbjct: 690 SLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAF--LSLQSNAIRDNGARSVAEAL 747

Query: 280 H-----DCYESSKKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                       K    P+             +LK  I   N + + GA+ LA   K  +
Sbjct: 748 AANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQ 807

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            LE +++  N I   G+ AL  A   N+ L  LNL +N+I+ +GA  L +AL    +L  
Sbjct: 808 GLESLDLQSNSISDAGVAALMGALCANQTLISLNLRENSISSEGARELARALCINCTLKN 867

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL+  GA +IA  + +N  L  ++L  N I       L +A++    L  +++ 
Sbjct: 868 LDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQ 927

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G+EG   +   +K+     AL L+
Sbjct: 928 ENAIGDEGASAVASALKANTALTALYLQ 955



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 162/382 (42%), Gaps = 34/382 (8%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G  ++++A   N+ L  L+L  NTI   GA  +   
Sbjct: 715  LADALKINRTLAFLSLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQRMADT 774

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L +  SL  L      +   GA ++A  L  N  LE ++L  N IS  G   L+ A+   
Sbjct: 775  LKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSISDAGVAALMGALCAN 834

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L  +N+ EN    EG  E         +A AL +      C+ +  D  +    D  A
Sbjct: 835  QTLISLNLRENSISSEGARE---------LARALCI-----NCTLKNLDLTANLLQDQGA 880

Query: 182  EGDNSNLSHNDSNHS-HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
            +     +  N +  S H   N     + ++   + Q + SL +      LDL +NA G  
Sbjct: 881  QAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTS------LDLQENAIGDE 934

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            G   +A  L+++   AL  L L    +G  G    ++AL D    +K       L++   
Sbjct: 935  GASAVASALKANT--ALTALYLQVASIGSRG----AQALGDALAVNK------TLEILDL 982

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
              N +   GAK LA   K   +L R+ + +N +   G   ++ A   N +L+H+NL  N 
Sbjct: 983  RGNTIGAAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHSLQHINLQGNH 1042

Query: 361  ITYKGAIPLGQAL-SKLPSLAI 381
            I   GA  + +A+ +  PS  +
Sbjct: 1043 IGESGARMISEAIRTNAPSCTV 1064


>gi|281343653|gb|EFB19237.1| hypothetical protein PANDA_014381 [Ailuropoda melanoleuca]
          Length = 1086

 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 195/449 (43%), Gaps = 61/449 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 689  IQRISLAENQIGNKGAKALARSLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAFL 748

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +   +K    LK++  S 
Sbjct: 749  SLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSS 808

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G E           A A+ L+ ++G    E  D +S   +D+        L  N
Sbjct: 809  NSIGDGGAE-----------ALAMALKVNQGL---ESLDLQSNSISDAGVAALMGALCAN 854

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L+L +N+   I  EG  +L R+
Sbjct: 855  QT---------------------------------LISLNLRENS---ISSEGARELARA 878

Query: 252  SCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
             C    L+ L L  N L   G + ++ A+ +            AL       N ++   A
Sbjct: 879  LCINCTLKNLDLTANLLQDQGAQAIAVAMRENQ----------ALTSLHLQWNFIQAGAA 928

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            K L    +  ++L  +++ +N I   G +A++ A + N  L  L L   +I  +GA  LG
Sbjct: 929  KALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTALTALYLQVASIGSRGAQALG 988

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             AL+   +L IL+L    + +AGA ++A  L  N++L  +NL  N + + G + +  A+ 
Sbjct: 989  DALAVNKTLEILDLRGNTIGAAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALS 1048

Query: 431  NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                L+ IN+  N  GE G   + + +++
Sbjct: 1049 GNHSLQHINLQGNHIGESGARMISEAIRT 1077



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +   A   L L +N +   G + +++AL
Sbjct: 710 SLLVNRSLTALDLRSNSIGPQGAKALADALKINRTLAF--LSLQSNAIRDNGARSVAEAL 767

Query: 280 H-----DCYESSKKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                       K    P+             +LK  I   N + + GA+ LA   K  +
Sbjct: 768 AANRTLSVLHLQKNTIGPVGAQRMADTLKQNRSLKELIFSSNSIGDGGAEALAMALKVNQ 827

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            LE +++  N I   G+ AL  A   N+ L  LNL +N+I+ +GA  L +AL    +L  
Sbjct: 828 GLESLDLQSNSISDAGVAALMGALCANQTLISLNLRENSISSEGARELARALCINCTLKN 887

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL+  GA +IA  + +N  L  ++L  N I       L +A++    L  +++ 
Sbjct: 888 LDLTANLLQDQGAQAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTSLDLQ 947

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G+EG   +   +K+     AL L+
Sbjct: 948 ENAIGDEGASAVASALKANTALTALYLQ 975



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 162/382 (42%), Gaps = 34/382 (8%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G  ++++A   N+ L  L+L  NTI   GA  +   
Sbjct: 735  LADALKINRTLAFLSLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQRMADT 794

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L +  SL  L      +   GA ++A  L  N  LE ++L  N IS  G   L+ A+   
Sbjct: 795  LKQNRSLKELIFSSNSIGDGGAEALAMALKVNQGLESLDLQSNSISDAGVAALMGALCAN 854

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L  +N+ EN    EG  E         +A AL +      C+ +  D  +    D  A
Sbjct: 855  QTLISLNLRENSISSEGARE---------LARALCI-----NCTLKNLDLTANLLQDQGA 900

Query: 182  EGDNSNLSHNDSNHS-HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
            +     +  N +  S H   N     + ++   + Q + SL +      LDL +NA G  
Sbjct: 901  QAIAVAMRENQALTSLHLQWNFIQAGAAKALGQALQLNRSLTS------LDLQENAIGDE 954

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            G   +A  L+++   AL  L L    +G  G    ++AL D    +K       L++   
Sbjct: 955  GASAVASALKANT--ALTALYLQVASIGSRG----AQALGDALAVNK------TLEILDL 1002

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
              N +   GAK LA   K   +L R+ + +N +   G   ++ A   N +L+H+NL  N 
Sbjct: 1003 RGNTIGAAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHSLQHINLQGNH 1062

Query: 361  ITYKGAIPLGQAL-SKLPSLAI 381
            I   GA  + +A+ +  PS  +
Sbjct: 1063 IGESGARMISEAIRTNAPSCTV 1084


>gi|156063206|ref|XP_001597525.1| hypothetical protein SS1G_01719 [Sclerotinia sclerotiorum 1980]
 gi|154697055|gb|EDN96793.1| hypothetical protein SS1G_01719 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 418

 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS---KALHDCYESS 286
           ++L+DNAFG      L   L S     L+ L LNNNGLG     L++    ALH     +
Sbjct: 101 VNLNDNAFGLNTQAPLVAFLSSHT--PLQHLILNNNGLGPHAGILIADALSALHAKKIEA 158

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
           +  G  +  L+  I GRNRLEN      A  +     +++V+M QNGI   GI+  LS+ 
Sbjct: 159 RAAGKQVPDLETVICGRNRLENGSMTAWAKAYSLHTGVKKVKMVQNGIRQEGISHLLSEG 218

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
            +  +++  L+L DNT T  G+  L + +    ++  L +GD LL   G+   A+ L   
Sbjct: 219 LKYARDIEILDLQDNTFTITGSKALAKVVGGWANIQELGVGDSLLGGKGSVIFAEALKKG 278

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEG--VEEMEKLM-- 457
            N  LE + L  N+I V+G      A K     LK+I ++ N+F E+   + E+++L+  
Sbjct: 279 KNNKLETLRLQFNDIGVKGLKSFTVAAKEALPNLKKIELNGNKFDEDHDCIVELKELLEE 338

Query: 458 KSFGMAAALVLEDD 471
           +    A  +VLED+
Sbjct: 339 RKEKFAGDIVLEDE 352



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 8/159 (5%)

Query: 12  LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ V+M QNGI   GI+  LS+  +  + +  L+L DNT T  G+  L + +    ++  
Sbjct: 196 VKKVKMVQNGIRQEGISHLLSEGLKYARDIEILDLQDNTFTITGSKALAKVVGGWANIQE 255

Query: 71  LNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GD LL   G+   A+ L    N  LE + L  N+I V+G      A K     LK+I
Sbjct: 256 LGVGDSLLGGKGSVIFAEALKKGKNNKLETLRLQFNDIGVKGLKSFTVAAKEALPNLKKI 315

Query: 128 NVSENQFGEEG--VEEMEKLM--KSFGMAAALVLEDDEG 162
            ++ N+F E+   + E+++L+  +    A  +VLED+ G
Sbjct: 316 ELNGNKFDEDHDCIVELKELLEERKEKFAGDIVLEDEWG 354


>gi|401626233|gb|EJS44189.1| rna1p [Saccharomyces arboricola H-6]
          Length = 407

 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 6/176 (3%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++LSDNAFG   +E L   +  +    ++ L L+NNG+G    + + KAL    ++ K  
Sbjct: 113 VNLSDNAFGLRTIESLESYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ FI GRNRLEN  A  LA   K     L+ V++ QNGI   G+ T +    + 
Sbjct: 171 SKPF-LETFICGRNRLENGSAVYLALGLKSHSAGLKVVKLYQNGIRPKGVATLIHYGLQY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
            K L  L+L DNT T   ++ L +AL     SL  LNL DCLLK+AG+  + K  T
Sbjct: 230 LKALEILDLQDNTFTKHASLVLAKALPTWKDSLYELNLNDCLLKTAGSDEVFKVFT 285



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L  L+L DNT T   ++ L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKALEILDLQDNTFTKHASLVLAKALPTWKDSLY 263

Query: 70  ILNLGDCLLKSAGASSIAKYLT 91
            LNL DCLLK+AG+  + K  T
Sbjct: 264 ELNLNDCLLKTAGSDEVFKVFT 285


>gi|367010360|ref|XP_003679681.1| hypothetical protein TDEL_0B03410 [Torulaspora delbrueckii]
 gi|359747339|emb|CCE90470.1| hypothetical protein TDEL_0B03410 [Torulaspora delbrueckii]
          Length = 393

 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 8/193 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L+LSDNAFG   ++ L + + ++    L+ L L+NNG+G    + + KAL    ++ K +
Sbjct: 101 LNLSDNAFGLRTIDSLENYIANAV--HLKHLILSNNGMGPFAGERIGKALFQLAQNKKAK 158

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ F+ GRNRLEN  A  LA   K     L+ V + QNGI   G+ T +    + 
Sbjct: 159 KEPF-LETFVCGRNRLENGSALYLALGLKSHADGLQTVRLYQNGIRPKGVATLIHYGLKF 217

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDN-- 404
           NKNL+ L+L DNT T   +  L   L     SL  LN+ DCLLK  G+  + K   D+  
Sbjct: 218 NKNLKVLDLQDNTFTKSASSILAANLPTWKESLLELNVNDCLLKEQGSDEVFKVFLDHKF 277

Query: 405 TTLEDVNLTCNEI 417
             LE +    NE+
Sbjct: 278 AKLEHLKFNYNEM 290



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V + QNGI   G+ T +    + NK L+ L+L DNT T   +  L   L     SL 
Sbjct: 192 LQTVRLYQNGIRPKGVATLIHYGLKFNKNLKVLDLQDNTFTKSASSILAANLPTWKESLL 251

Query: 70  ILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEI 106
            LN+ DCLLK  G+  + K   D+    LE +    NE+
Sbjct: 252 ELNVNDCLLKEQGSDEVFKVFLDHKFAKLEHLKFNYNEM 290


>gi|397488253|ref|XP_003815183.1| PREDICTED: protein NLRC3 isoform 2 [Pan paniscus]
          Length = 1112

 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 197/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +G+  L  AL    +L  L
Sbjct: 715  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSL 774

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 775  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 834

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K            ++G    E  D +S   +D+        L  N
Sbjct: 835  NSIGDGGAKALAEALKV-----------NQGL---ESLDLQSNSISDAGVAALMGALCTN 880

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L L +N+  P G + +A  LR+
Sbjct: 881  QT---------------------------------LLSLSLRENSISPEGAQAIAHALRA 907

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +      +  + L L+      N ++   A+
Sbjct: 908  NS--TLKNLDLTANLLHDQGARAIAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQ 955

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+
Sbjct: 956  ALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGE 1015

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 1016 ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG 1075

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  G+ G   + + +K+
Sbjct: 1076 NHRLQHINLQGNHIGDSGARMISEAIKT 1103



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 175/421 (41%), Gaps = 83/421 (19%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 741  RSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 800

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++ L+ N I   G   L +A+K    L+ +++
Sbjct: 801  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 860

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 861  QSNSISDAGV---AALMGAL--------------CTNQTLLSLSLRENSISPEGAQAIAH 903

Query: 184  ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KT 223
                NS L + D  +N  H+   ++   + + + T    H+                 + 
Sbjct: 904  ALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQL 963

Query: 224  GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
               L  LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++L +AL    
Sbjct: 964  NRSLTSLDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQVLGEAL---- 1017

Query: 284  ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                               NR                 TLE +++  N I   G  AL++
Sbjct: 1018 -----------------AVNR-----------------TLEILDLRGNAIGVAGAKALAN 1043

Query: 344  AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  
Sbjct: 1044 ALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1103

Query: 404  N 404
            N
Sbjct: 1104 N 1104



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +   G + +++AL
Sbjct: 736  SLLVNRSLTSLDLRGNSIGPQGSKALADALKIN--RTLTSLSLQGNTVRDDGARSMAEAL 793

Query: 280  HDCYESS-----KKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                  S     K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 794  ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQ 853

Query: 322  TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
             LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  
Sbjct: 854  GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKN 913

Query: 382  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
            L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 914  LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 973

Query: 442  ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            EN  G++G   + + +K      AL L+
Sbjct: 974  ENAIGDDGACAVARALKVNTALTALYLQ 1001



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 694 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 753

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +G+  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 754 GPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 813

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++ +S N  G+ G + + + +K
Sbjct: 814 AQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALK 850



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 845  LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 904

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 905  LRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 964

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
              L  +++ EN  G++G   + + +K      AL L+
Sbjct: 965  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 1001



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 929  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 988

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 989  LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1048

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1049 SSLRRLNLQENSLGMDG 1065



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 69/131 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 817 MADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 876

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 877 LCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVREN 936

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 937 RTLTSLHLQWN 947


>gi|428182042|gb|EKX50904.1| hypothetical protein GUITHDRAFT_103488 [Guillardia theta CCMP2712]
          Length = 591

 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 190/479 (39%), Gaps = 60/479 (12%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+ +      LE + + +N I   G   L++      +L  L +  N I  +G I L  A
Sbjct: 109 LSCLLSSCVFLETLNLNENAIGSGGAKILAEILPNLSRLVELRMQSNYIHDEGLIVLTSA 168

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L +L+L D  L   G   ++  L +N++L  ++L+ N I  +G   L   +   
Sbjct: 169 LDRCNNLTLLDLADNDLGPVGMEFLSSKLAENSSLTHLDLSNNAIGDEGATRLAANLFVS 228

Query: 122 TKL--KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
           TKL  K +++  N    EG   +   +   G       + D G+             N  
Sbjct: 229 TKLSIKALSLRGNGITSEGAARLAAALPPLG-------QLDLGK-------------NSI 268

Query: 180 DAEGDN---SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
            AEG     S++    +  S + S         S   S      L   ++L ELDLS N+
Sbjct: 269 GAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVS-----VLPQCSQLQELDLSCNS 323

Query: 237 FGPIGVEGLADLLRSSCCFA--------------------------LEELKLNNNGLGIT 270
           FG      LA ++    C +                          L EL+LN+N +G  
Sbjct: 324 FGDHTASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVLRELRLNDNQIGCE 383

Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
           G  LL+  L  C      +   L+      G N + +EG   L+AV      L+ + +  
Sbjct: 384 GIYLLASTLPQCGRLVSLD---LSKNQIALGWNDISDEGIGFLSAVLASCLRLKSLSLEC 440

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N I   G + L+ +     NL  LNL+ N +   G I L   LSK  SL  L+L +C + 
Sbjct: 441 NHIEEEGCSLLAVSLPSCSNLNTLNLSSNDLESNGVIVLADVLSKCESLTHLSLSNCKIG 500

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           S GA+ +A  L     +  ++L  N+I V G       +   + L    V  N  G+EG
Sbjct: 501 SKGATGLAHTLP-RCKVSFLDLQENKIGVAGAATFASVLPRCSHLSHFRVGRNNLGDEG 558



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 147/392 (37%), Gaps = 35/392 (8%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           + + G   ++  L+    LE +NL  N I   G   L + + N ++L ++ +  N   +E
Sbjct: 101 IGTTGVKDLSCLLSSCVFLETLNLNENAIGSGGAKILAEILPNLSRLVELRMQSNYIHDE 160

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G+  +   +        L L D++      E       EN S    D SN +  D   + 
Sbjct: 161 GLIVLTSALDRCNNLTLLDLADNDLGPVGMEFLSSKLAENSSLTHLDLSNNAIGDEGATR 220

Query: 198 NASN------------QSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
            A+N                N   S   +  +      G    +LDL  N+ G  G   +
Sbjct: 221 LAANLFVSTKLSIKALSLRGNGITSEGAARLAAALPPLG----QLDLGKNSIGAEGAGLI 276

Query: 246 ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
           A  +R     A+  L L+ N LG  G  L+   L  C +  + + S           N  
Sbjct: 277 ASSIRMW--PAISSLDLSANLLGEEGLSLIVSVLPQCSQLQELDLSC----------NSF 324

Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
            +  A +LA+V      L +V +    I   G   L+ +      LR L LNDN I  +G
Sbjct: 325 GDHTASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVLRELRLNDNQIGCEG 384

Query: 366 AIPLGQALSKLPSLAILN-------LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
              L   L +   L  L+       LG   +   G   ++  L     L+ ++L CN I 
Sbjct: 385 IYLLASTLPQCGRLVSLDLSKNQIALGWNDISDEGIGFLSAVLASCLRLKSLSLECNHIE 444

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            +G   L  ++ + + L  +N+S N     GV
Sbjct: 445 EEGCSLLAVSLPSCSNLNTLNLSSNDLESNGV 476



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 1/138 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            L+AV      L+ + +  N I   G + L+ +      L  LNL+ N +   G I L  
Sbjct: 422 FLSAVLASCLRLKSLSLECNHIEEEGCSLLAVSLPSCSNLNTLNLSSNDLESNGVIVLAD 481

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            LSK  SL  L+L +C + S GA+ +A  L     +  ++L  N+I V G       +  
Sbjct: 482 VLSKCESLTHLSLSNCKIGSKGATGLAHTLP-RCKVSFLDLQENKIGVAGAATFASVLPR 540

Query: 121 KTKLKQINVSENQFGEEG 138
            + L    V  N  G+EG
Sbjct: 541 CSHLSHFRVGRNNLGDEG 558



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 130/301 (43%), Gaps = 56/301 (18%)

Query: 222 KTGARLVE-LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL- 279
           + G  LV+ LDL  N  G  GV+ L+ LL SSC F LE L LN N +G  G K+L++ L 
Sbjct: 85  RDGWNLVKSLDLEGNYIGTTGVKDLSCLL-SSCVF-LETLNLNENAIGSGGAKILAEILP 142

Query: 280 ---------------HD------------C-----YESSKKEGSPLALKVFIAGR----- 302
                          HD            C      + +  +  P+ ++ F++ +     
Sbjct: 143 NLSRLVELRMQSNYIHDEGLIVLTSALDRCNNLTLLDLADNDLGPVGME-FLSSKLAENS 201

Query: 303 ---------NRLENEGAKMLAA-VFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNL 351
                    N + +EGA  LAA +F   K +++ + +  NGI   G   L+ A       
Sbjct: 202 SLTHLDLSNNAIGDEGATRLAANLFVSTKLSIKALSLRGNGITSEGAARLAAALPPLG-- 259

Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
             L+L  N+I  +GA  +  ++   P+++ L+L   LL   G S I   L   + L++++
Sbjct: 260 -QLDLGKNSIGAEGAGLIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQCSQLQELD 318

Query: 412 LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
           L+CN         L   + +   L ++++S    G EG   +   +  + +   L L D+
Sbjct: 319 LSCNSFGDHTASLLASVIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVLRELRLNDN 378

Query: 472 E 472
           +
Sbjct: 379 Q 379



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 130/328 (39%), Gaps = 45/328 (13%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A+  +    +  +++  N +   G++ +     +  +L+ L+L+ N+     A  L  
Sbjct: 275 LIASSIRMWPAISSLDLSANLLGEEGLSLIVSVLPQCSQLQELDLSCNSFGDHTASLLAS 334

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            +     L+ ++L + L+ S G   +A  L   + L ++ L  N+I  +G   L   +  
Sbjct: 335 VIPHCACLSKVSLSNTLIGSEGTGFLASSLPHYSVLRELRLNDNQIGCEGIYLLASTLPQ 394

Query: 121 KTKLKQINVSENQFG-------EEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
             +L  +++S+NQ         +EG+  +  +     +A+ L L+    EC+  E++  S
Sbjct: 395 CGRLVSLDLSKNQIALGWNDISDEGIGFLSAV-----LASCLRLKSLSLECNHIEEEGCS 449

Query: 174 --EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELD 231
                  S +  +  NLS ND       SN     ++      + +H+S           
Sbjct: 450 LLAVSLPSCSNLNTLNLSSNDLE-----SNGVIVLADVLSKCESLTHLS----------- 493

Query: 232 LSDNAFGPIGVEGLADLL-RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEG 290
           LS+   G  G  GLA  L R    F    L L  N +G+ G    +  L  C   S    
Sbjct: 494 LSNCKIGSKGATGLAHTLPRCKVSF----LDLQENKIGVAGAATFASVLPRCSHLSH--- 546

Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFK 318
                  F  GRN L +EG   L    K
Sbjct: 547 -------FRVGRNNLGDEGESFLLGAVK 567


>gi|397488251|ref|XP_003815182.1| PREDICTED: protein NLRC3 isoform 1 [Pan paniscus]
          Length = 1065

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 197/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +G+  L  AL    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K            ++G    E  D +S   +D+        L  N
Sbjct: 788  NSIGDGGAKALAEALKV-----------NQGL---ESLDLQSNSISDAGVAALMGALCTN 833

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L L +N+  P G + +A  LR+
Sbjct: 834  QT---------------------------------LLSLSLRENSISPEGAQAIAHALRA 860

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +      +  + L L+      N ++   A+
Sbjct: 861  NS--TLKNLDLTANLLHDQGARAIAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQ 908

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+
Sbjct: 909  ALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGE 968

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 969  ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG 1028

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  G+ G   + + +K+
Sbjct: 1029 NHRLQHINLQGNHIGDSGARMISEAIKT 1056



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 175/421 (41%), Gaps = 83/421 (19%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 694  RSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++ L+ N I   G   L +A+K    L+ +++
Sbjct: 754  MLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDL 813

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 814  QSNSISDAGV---AALMGAL--------------CTNQTLLSLSLRENSISPEGAQAIAH 856

Query: 184  ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KT 223
                NS L + D  +N  H+   ++   + + + T    H+                 + 
Sbjct: 857  ALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQL 916

Query: 224  GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
               L  LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++L +AL    
Sbjct: 917  NRSLTSLDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQVLGEAL---- 970

Query: 284  ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                               NR                 TLE +++  N I   G  AL++
Sbjct: 971  -----------------AVNR-----------------TLEILDLRGNAIGVAGAKALAN 996

Query: 344  AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  
Sbjct: 997  ALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1056

Query: 404  N 404
            N
Sbjct: 1057 N 1057



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +   G + +++AL
Sbjct: 689 SLLVNRSLTSLDLRGNSIGPQGSKALADALKIN--RTLTSLSLQGNTVRDDGARSMAEAL 746

Query: 280 HDCYESS-----KKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                 S     K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 747 ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQ 806

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  
Sbjct: 807 GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKN 866

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 867 LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 926

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G++G   + + +K      AL L+
Sbjct: 927 ENAIGDDGACAVARALKVNTALTALYLQ 954



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 647 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 706

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +G+  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 707 GPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 766

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++ +S N  G+ G + + + +K
Sbjct: 767 AQRMADALKQNRSLKELMLSSNSIGDGGAKALAEALK 803



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 798 LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 857

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 858 LRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 917

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G++G   + + +K      AL L+
Sbjct: 918 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 954



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 882  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 941

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 942  LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1001

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1002 SSLRRLNLQENSLGMDG 1018



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 69/131 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 770 MADALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 829

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 830 LCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVREN 889

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 890 RTLTSLHLQWN 900


>gi|348583996|ref|XP_003477758.1| PREDICTED: protein NLRC3-like [Cavia porcellus]
          Length = 1065

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 161/370 (43%), Gaps = 33/370 (8%)

Query: 82   GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
            GA ++A+ L  N +L  ++L  N I  QG   L  A+K    L  +++  N   ++G   
Sbjct: 682  GAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNAIKDDGARS 741

Query: 142  MEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASN 201
            + + +    M + L L+ +       +Q  E+ ++N S  E   S+ S  D      A  
Sbjct: 742  VAEALAVNQMLSVLHLQKNVIGPRGAQQMAEALKQNRSLKELMLSSNSIGDGGAKALAE- 800

Query: 202  QSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC-FALEEL 260
                              +LK    L+ LDL  N+   +GV   A L+ + C    L  L
Sbjct: 801  ------------------ALKVNQALLNLDLQSNSISDMGV---AALMGALCANQTLLSL 839

Query: 261  KLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
             L  N +   G + L++AL          GS   LK      N L ++GA+ +A    + 
Sbjct: 840  NLRENSISPEGAQALAQAL----------GSNSTLKHLDLTANLLHDQGAQAIAVAVGEN 889

Query: 321  KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
             TL+ + +  N I      AL  A + N +L  L+L +N I  +GA  L  AL    +L 
Sbjct: 890  HTLQSLHLQWNFIQVGAARALGQALQLNSSLTSLDLQENAIGDEGASALASALKVNTALT 949

Query: 381  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
             L L    + S GA  + + L  N TLE ++L  N I V G   L  A+K  + L+++++
Sbjct: 950  ALYLQVASIGSPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLSL 1009

Query: 441  SENQFGEEGV 450
             EN  G +GV
Sbjct: 1010 QENSLGMDGV 1019



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 26/271 (9%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L +N +   G + +++AL
Sbjct: 689 SLLVNRSLTTLDLRSNSIGPQGAKALADALKIN--RTLTSLSLQSNAIKDDGARSVAEAL 746

Query: 280 ---------------------HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
                                    E+ K+  S   LK  +   N + + GAK LA   K
Sbjct: 747 AVNQMLSVLHLQKNVIGPRGAQQMAEALKQNRS---LKELMLSSNSIGDGGAKALAEALK 803

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
             + L  +++  N I  +G+ AL  A   N+ L  LNL +N+I+ +GA  L QAL    +
Sbjct: 804 VNQALLNLDLQSNSISDMGVAALMGALCANQTLLSLNLRENSISPEGAQALAQALGSNST 863

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L  L+L   LL   GA +IA  + +N TL+ ++L  N I V     L +A++  + L  +
Sbjct: 864 LKHLDLTANLLHDQGAQAIAVAVGENHTLQSLHLQWNFIQVGAARALGQALQLNSSLTSL 923

Query: 439 NVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           ++ EN  G+EG   +   +K      AL L+
Sbjct: 924 DLQENAIGDEGASALASALKVNTALTALYLQ 954



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 169/397 (42%), Gaps = 59/397 (14%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLTSL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    +K  GA S+A+ L  N  L  ++L  N I  +G   + +A+K    LK++ +S 
Sbjct: 728  SLQSNAIKDDGARSVAEALAVNQMLSVLHLQKNVIGPRGAQQMAEALKQNRSLKELMLSS 787

Query: 132  NQFGEEGVEEMEKLMK----------------SFGMAAALVLEDDEGECSDEEQDEESEE 175
            N  G+ G + + + +K                  G+AA +        C+++     +  
Sbjct: 788  NSIGDGGAKALAEALKVNQALLNLDLQSNSISDMGVAALM-----GALCANQTLLSLNLR 842

Query: 176  END---------SDAEGDNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHM----- 219
            EN          + A G NS L H D  +N  H+   Q+   +   ++T    H+     
Sbjct: 843  ENSISPEGAQALAQALGSNSTLKHLDLTANLLHDQGAQAIAVAVGENHTLQSLHLQWNFI 902

Query: 220  ----------SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
                      +L+  + L  LDL +NA G  G   LA  L+ +   AL  L L    +G 
Sbjct: 903  QVGAARALGQALQLNSSLTSLDLQENAIGDEGASALASALKVNT--ALTALYLQVASIGS 960

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
             G ++L +AL               L++     N +   GAK LA   K   +L R+ + 
Sbjct: 961  PGAQVLGEAL----------AVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLSLQ 1010

Query: 330  QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
            +N +   G+  ++ A   N  L+H+NL  N I   GA
Sbjct: 1011 ENSLGMDGVICVATALSGNHGLQHINLQGNRIGESGA 1047



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 82/157 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + L ++++  N I  +G+ AL  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 798 LAEALKVNQALLNLDLQSNSISDMGVAALMGALCANQTLLSLNLRENSISPEGAQALAQA 857

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N TL+ ++L  N I V     L +A++  
Sbjct: 858 LGSNSTLKHLDLTANLLHDQGAQAIAVAVGENHTLQSLHLQWNFIQVGAARALGQALQLN 917

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           + L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 918 SSLTSLDLQENAIGDEGASALASALKVNTALTALYLQ 954



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVF-KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L++V  +K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 647 NQFQDPVMELLSSVLSRKDCRIQKISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSI 706

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    +K  GA S+A+ L  N  L  ++L  N I  +G
Sbjct: 707 GPQGAKALADALKINRTLTSLSLQSNAIKDDGARSVAEALAVNQMLSVLHLQKNVIGPRG 766

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              + +A+K    LK++ +S N  G+ G + + + +K
Sbjct: 767 AQQMAEALKQNRSLKELMLSSNSIGDGGAKALAEALK 803



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            TL+ + +  N I      AL  A + N  L  L+L +N I  +GA  L  AL    +L  
Sbjct: 891  TLQSLHLQWNFIQVGAARALGQALQLNSSLTSLDLQENAIGDEGASALASALKVNTALTA 950

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L L    + S GA  + + L  N TLE ++L  N I V G   L  A+K  + L+++++ 
Sbjct: 951  LYLQVASIGSPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLSLQ 1010

Query: 131  ENQFGEEGV 139
            EN  G +GV
Sbjct: 1011 ENSLGMDGV 1019



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 72/138 (52%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            +L  +++ +N I   G +AL+ A + N  L  L L   +I   GA  LG+AL+   +L I
Sbjct: 919  SLTSLDLQENAIGDEGASALASALKVNTALTALYLQVASIGSPGAQVLGEALAVNRTLEI 978

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    +  AGA ++A  L  N++L  ++L  N + + G + +  A+     L+ IN+ 
Sbjct: 979  LDLRGNAIGVAGAKALANALKVNSSLRRLSLQENSLGMDGVICVATALSGNHGLQHINLQ 1038

Query: 131  ENQFGEEGVEEMEKLMKS 148
             N+ GE G   +   +K+
Sbjct: 1039 GNRIGESGARMISDAIKT 1056



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 139/327 (42%), Gaps = 31/327 (9%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   K+ ++L+ + +  N I   G  AL++A + N+ L +L+L  N+I+  G   L  A
Sbjct: 770  MAEALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQALLNLDLQSNSISDMGVAALMGA 829

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  LNL +  +   GA ++A+ L  N+TL+ ++LT N +  QG   +  A+   
Sbjct: 830  LCANQTLLSLNLRENSISPEGAQALAQALGSNSTLKHLDLTANLLHDQGAQAIAVAVGEN 889

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L+ +++  N F + G        ++ G A  L         S    D +     D  A
Sbjct: 890  HTLQSLHLQWN-FIQVGAA------RALGQALQL-------NSSLTSLDLQENAIGDEGA 935

Query: 182  EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
                S L  N +  +      S  +       +     +L     L  LDL  NA G  G
Sbjct: 936  SALASALKVNTALTALYLQVASIGSPG-----AQVLGEALAVNRTLEILDLRGNAIGVAG 990

Query: 242  VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
             + LA+ L+ +   +L  L L  N LG+ G   ++ AL      S   G    L+     
Sbjct: 991  AKALANALKVNS--SLRRLSLQENSLGMDGVICVATAL------SGNHG----LQHINLQ 1038

Query: 302  RNRLENEGAKMLAAVFKKLKTLERVEM 328
             NR+   GA+M++   K    +  VEM
Sbjct: 1039 GNRIGESGARMISDAIKTNAPMCTVEM 1065


>gi|290998597|ref|XP_002681867.1| predicted protein [Naegleria gruberi]
 gi|284095492|gb|EFC49123.1| predicted protein [Naegleria gruberi]
          Length = 1315

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 180/429 (41%), Gaps = 73/429 (17%)

Query: 24   HVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 83
            HV IT L +       +R   + D     KGAI L Q L    +L ++++G C L    A
Sbjct: 645  HVNITYLQEI-----DIRGCRIED-----KGAIELFQILESCSNLTLIDVGACFLTDKSA 694

Query: 84   SSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
             +IAKYL ++   L+ ++L  N I  +G   ++  +++   L  I+   N     G   +
Sbjct: 695  PAIAKYLLSEKCILQTLDLRWNSIGAKGAKIIIDTLEHNKSLTSISFRLNPIQSVGANYV 754

Query: 143  EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
              + KS              ECS                 G+    S  D   +  + + 
Sbjct: 755  --IRKSL-------------ECS----------------AGERYGFSI-DCRQTSKSDDL 782

Query: 203  SHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSC-------CF 255
                S+   +  N              LDLS     P G   L++ L            F
Sbjct: 783  GFVFSDMIESVQNAKRAEFPVP---FSLDLSSVEMYPEGTIHLSNFLYQVSEIPIKNRPF 839

Query: 256  ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
             + +L L+ N LG  G + LS+ L +         S L L +   GRN +  +GA  LA 
Sbjct: 840  EITKLALDYNNLGDLGVEYLSRGLMN-------SSSILILTI---GRNLITEKGAICLAQ 889

Query: 316  VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
            V KK +TL  +++ +N +  +G  +L++A   N+ L +LNL  N I   GA+    A S 
Sbjct: 890  VLKKNQTLTYLDLQKNKVGELGGFSLAEALRTNQTLTYLNLKSNYIGDLGALAFANAFS- 948

Query: 376  LPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 434
             P+       D + K+    ++ + + + N TL +++LT N I+      L+K+++  T 
Sbjct: 949  -PT-------DQIFKNTNEPTLERNVGEFNDTLINLDLTNNRITYLSARHLMKSIERNTS 1000

Query: 435  LKQINVSEN 443
            L ++N+S N
Sbjct: 1001 LSRLNMSNN 1009



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 10/132 (7%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA V KK +TL ++++ +N +  +G  +L++A   N+ L +LNL  N I   GA+    A
Sbjct: 887  LAQVLKKNQTLTYLDLQKNKVGELGGFSLAEALRTNQTLTYLNLKSNYIGDLGALAFANA 946

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             S  P+       D + K+    ++ + + + N TL +++LT N I+      L+K+++ 
Sbjct: 947  FS--PT-------DQIFKNTNEPTLERNVGEFNDTLINLDLTNNRITYLSARHLMKSIER 997

Query: 121  KTKLKQINVSEN 132
             T L ++N+S N
Sbjct: 998  NTSLSRLNMSNN 1009



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 27/178 (15%)

Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
           K++   ++D Y + K     L   + I GR R   +G + +         ++ + +P   
Sbjct: 599 KIMGDYIYDYYSNVKDRQVYLE-NIRIKGR-RFSYQGWEGI---------VKSLALP--- 644

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
             HV IT L +      ++R   + D     KGAI L Q L    +L ++++G C L   
Sbjct: 645 --HVNITYLQEI-----DIRGCRIED-----KGAIELFQILESCSNLTLIDVGACFLTDK 692

Query: 393 GASSIAKY-LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            A +IAKY L++   L+ ++L  N I  +G   ++  +++   L  I+   N     G
Sbjct: 693 SAPAIAKYLLSEKCILQTLDLRWNSIGAKGAKIIIDTLEHNKSLTSISFRLNPIQSVG 750


>gi|255071059|ref|XP_002507611.1| predicted protein [Micromonas sp. RCC299]
 gi|226522886|gb|ACO68869.1| predicted protein [Micromonas sp. RCC299]
          Length = 559

 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 182/420 (43%), Gaps = 35/420 (8%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +++  NG+   G+ A+ +A + N  L  L+L  N +   GA+ L   L    S+  LNL 
Sbjct: 156 IDLSANGMGEAGVFAICEALKSNSALEMLSLASNNLQDAGAVALANYLQSDSSINTLNLN 215

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
            C +   GA ++A+ L  NT+L  + L  N I  +G   + +A+     L  +++S N  
Sbjct: 216 SCGISDTGAIALAEMLKKNTSLVALELNNNNIDYEGTCAIAEALSENATLTTLSISGNYI 275

Query: 135 GEEGVEEMEK-LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDS 193
           G  G   + K L+K+ G+   ++  +D G    E                    L    S
Sbjct: 276 GGLGASALAKGLVKNKGLKGLIINGNDIGNIGVEA-------------------LCKAIS 316

Query: 194 NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSC 253
                 +N    N+   H +       +KT   L  L+L  N    +G   + + LR + 
Sbjct: 317 ARETKLTNLDMGNNGIGHESGEYIAAYIKTDKELASLNLYMNELCDLGAIAVCNALRQNT 376

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
             A++ L +  N +   G + L  AL +           ++L+    G N +  +G   L
Sbjct: 377 --AIQILDIGGNNILQAGAESLGDALKE----------NISLRTLEIGYNPIGPKGGAAL 424

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A  FK    L  + M    I   G   ++DA + N+++  L+L  N +  +G   + Q+L
Sbjct: 425 ADAFKFHSKLTTLRMGWCKITKEGARHIADAMKYNEHVTTLDLRGNELGDEGCAAIAQSL 484

Query: 374 SKL-PSLAILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEISVQGGLDLVKAMK 430
             +  +L  L+LG   +K  GA ++A+ + +N   ++  ++L  N I+  G + L +A++
Sbjct: 485 GMVNENLTSLDLGYNEIKDNGAFALAQAIKNNADASITSISLNNNYITKFGEVALTEAVE 544



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/433 (21%), Positives = 175/433 (40%), Gaps = 61/433 (14%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L D   E ++   ++ +   +   G+  + +AL+       ++L    +  AG  +I + 
Sbjct: 115 LRDMMSEMRRYNTVDFHGRNLGDNGSAYISEALAFNDVATCIDLSANGMGEAGVFAICEA 174

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L  N+ LE ++L  N +   G + L   +++ + +  +N++     + G   + +++K  
Sbjct: 175 LKSNSALEMLSLASNNLQDAGAVALANYLQSDSSINTLNLNSCGISDTGAIALAEMLKKN 234

Query: 150 GMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQ 209
               AL L                                               NN+N 
Sbjct: 235 TSLVALEL-----------------------------------------------NNNNI 247

Query: 210 SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            +  +     +L   A L  L +S N  G +G   LA  L  +    L+ L +N N +G 
Sbjct: 248 DYEGTCAIAEALSENATLTTLSISGNYIGGLGASALAKGLVKN--KGLKGLIINGNDIGN 305

Query: 270 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
            G + L KA+      S +E     L +   G N + +E  + +AA  K  K L  + + 
Sbjct: 306 IGVEALCKAI------SARETKLTNLDM---GNNGIGHESGEYIAAYIKTDKELASLNLY 356

Query: 330 QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 389
            N +  +G  A+ +A  +N  ++ L++  N I   GA  LG AL +  SL  L +G   +
Sbjct: 357 MNELCDLGAIAVCNALRQNTAIQILDIGGNNILQAGAESLGDALKENISLRTLEIGYNPI 416

Query: 390 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
              G +++A     ++ L  + +   +I+ +G   +  AMK    +  +++  N+ G+EG
Sbjct: 417 GPKGGAALADAFKFHSKLTTLRMGWCKITKEGARHIADAMKYNEHVTTLDLRGNELGDEG 476

Query: 450 VEEMEKLMKSFGM 462
                 + +S GM
Sbjct: 477 C---AAIAQSLGM 486



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 4/173 (2%)

Query: 301 GRNRLENEGAKMLAAV-FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
           GRN  +N  A +  A+ F  + T   +++  NG+   G+ A+ +A + N  L  L+L  N
Sbjct: 132 GRNLGDNGSAYISEALAFNDVATC--IDLSANGMGEAGVFAICEALKSNSALEMLSLASN 189

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            +   GA+ L   L    S+  LNL  C +   GA ++A+ L  NT+L  + L  N I  
Sbjct: 190 NLQDAGAVALANYLQSDSSINTLNLNSCGISDTGAIALAEMLKKNTSLVALELNNNNIDY 249

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK-LMKSFGMAAALVLEDD 471
           +G   + +A+     L  +++S N  G  G   + K L+K+ G+   ++  +D
Sbjct: 250 EGTCAIAEALSENATLTTLSISGNYIGGLGASALAKGLVKNKGLKGLIINGND 302



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 71/144 (49%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+  +   L +++M  NGI H     ++   + +K+L  LNL  N +   GAI +  AL 
Sbjct: 314 AISARETKLTNLDMGNNGIGHESGEYIAAYIKTDKELASLNLYMNELCDLGAIAVCNALR 373

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           +  ++ IL++G   +  AGA S+   L +N +L  + +  N I  +GG  L  A K  +K
Sbjct: 374 QNTAIQILDIGGNNILQAGAESLGDALKENISLRTLEIGYNPIGPKGGAALADAFKFHSK 433

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L  + +   +  +EG   +   MK
Sbjct: 434 LTTLRMGWCKITKEGARHIADAMK 457



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 3/150 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +AA  K  K L  + +  N +  +G  A+ +A  +N  ++ L++  N I   GA  LG A
Sbjct: 340 IAAYIKTDKELASLNLYMNELCDLGAIAVCNALRQNTAIQILDIGGNNILQAGAESLGDA 399

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L +G   +   G +++A     ++ L  + +   +I+ +G   +  AMK  
Sbjct: 400 LKENISLRTLEIGYNPIGPKGGAALADAFKFHSKLTTLRMGWCKITKEGARHIADAMKYN 459

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
             +  +++  N+ G+EG      + +S GM
Sbjct: 460 EHVTTLDLRGNELGDEGC---AAIAQSLGM 486



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 67/146 (45%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           +  E  + L  +  +++    V+     +   G   +S+A   N     ++L+ N +   
Sbjct: 107 IHGEFKRQLRDMMSEMRRYNTVDFHGRNLGDNGSAYISEALAFNDVATCIDLSANGMGEA 166

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G   + +AL    +L +L+L    L+ AGA ++A YL  ++++  +NL    IS  G + 
Sbjct: 167 GVFAICEALKSNSALEMLSLASNNLQDAGAVALANYLQSDSSINTLNLNSCGISDTGAIA 226

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGV 450
           L + +K  T L  + ++ N    EG 
Sbjct: 227 LAEMLKKNTSLVALELNNNNIDYEGT 252


>gi|222137288|gb|ACM45226.1| NLRC3 receptor [Ictalurus punctatus]
          Length = 800

 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 161/381 (42%), Gaps = 35/381 (9%)

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L++ D  + S G   +++ L  N TL  ++L  N I  +G   L  A+K    +  +N+ 
Sbjct: 406 LSMADSSISSKGIKPLSRALLVNRTLTTLDLHGNNIGTKGAKTLADALKMNQVIVSVNLQ 465

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            NQ G+EG   + ++++S    + L          + +++    E     AE    N   
Sbjct: 466 SNQIGDEGAHALAEVLQSNRKLSTL----------NVKKNSIGPEGVKKIAEALKKNQIL 515

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
            D N S N        +       N +         L  L L  N+    G++ L   L 
Sbjct: 516 QDLNVSGNHLGDIGALALAQALAVNHT---------LQTLSLRSNSVSDRGMKALTQAL- 565

Query: 251 SSCCF--ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
              C+   L +L L  N +G+ G + + +AL + +           L+      N L +E
Sbjct: 566 ---CYNKGLTKLNLRENSIGVEGARAIGRALQENH----------TLRELDLTANLLNDE 612

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           G K +AA  K  + L  + +  N +      AL+ + + N  ++ L+L +N +   G + 
Sbjct: 613 GVKAIAAAVKVNRALTSLHLQWNFMKAGAAKALAQSLQSNTFIQLLDLQENALGDDGVVS 672

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           L  AL    SL +L L       AGA ++A+ LT N +L  ++L  N I + G   L  A
Sbjct: 673 LAGALKVNSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNSIGMGGAKALSSA 732

Query: 429 MKNKTKLKQINVSENQFGEEG 449
           +K    L+ +N+ EN  G +G
Sbjct: 733 LKTNRSLRSLNLQENSLGMDG 753



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 194/425 (45%), Gaps = 33/425 (7%)

Query: 36  ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
           ++  ++ L++ D++I+ KG  PL +AL    +L  L+L    + + GA ++A  L  N  
Sbjct: 399 KDSHIQSLSMADSSISSKGIKPLSRALLVNRTLTTLDLHGNNIGTKGAKTLADALKMNQV 458

Query: 96  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           +  VNL  N+I  +G   L + +++  KL  +NV +N  G EGV+++ + +K   +    
Sbjct: 459 IVSVNLQSNQIGDEGAHALAEVLQSNRKLSTLNVKKNSIGPEGVKKIAEALKKNQIL--- 515

Query: 156 VLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHS-HNASNQSHNNSNQSHNTS 214
                        QD      +  D  G  +       NH+    S +S++ S++     
Sbjct: 516 -------------QDLNVSGNHLGDI-GALALAQALAVNHTLQTLSLRSNSVSDRGMKAL 561

Query: 215 NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
            Q+   L     L +L+L +N+ G  G   +   L+ +    L EL L  N L   G K 
Sbjct: 562 TQA---LCYNKGLTKLNLRENSIGVEGARAIGRALQEN--HTLRELDLTANLLNDEGVKA 616

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           ++ A+        +  + L L+      N ++   AK LA   +    ++ +++ +N + 
Sbjct: 617 IAAAV-----KVNRALTSLHLQ-----WNFMKAGAAKALAQSLQSNTFIQLLDLQENALG 666

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
             G+ +L+ A + N +L  L L   +    GA+ L +AL+   SL  L+L    +   GA
Sbjct: 667 DDGVVSLAGALKVNSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNSIGMGGA 726

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            +++  L  N +L  +NL  N + + G + +  A++   +L  IN+  N  GE G + + 
Sbjct: 727 KALSSALKTNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVS 786

Query: 455 KLMKS 459
             ++S
Sbjct: 787 DAIRS 791



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 163/384 (42%), Gaps = 25/384 (6%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++ + M  + I   GI  LS A   N+ L  L+L+ N I  KGA  L  AL     +  +
Sbjct: 403 IQSLSMADSSISSKGIKPLSRALLVNRTLTTLDLHGNNIGTKGAKTLADALKMNQVIVSV 462

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL    +   GA ++A+ L  N  L  +N+  N I  +G   + +A+K    L+ +NVS 
Sbjct: 463 NLQSNQIGDEGAHALAEVLQSNRKLSTLNVKKNSIGPEGVKKIAEALKKNQILQDLNVSG 522

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDD-----------EGECSDEEQDEESEEENDSD 180
           N  G+ G   + + +        L L  +           +  C ++   + +  EN   
Sbjct: 523 NHLGDIGALALAQALAVNHTLQTLSLRSNSVSDRGMKALTQALCYNKGLTKLNLRENSIG 582

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
            EG  +       NH+    + + N  N     +  +  ++K    L  L L  N     
Sbjct: 583 VEGARAIGRALQENHTLRELDLTANLLNDEGVKAIAA--AVKVNRALTSLHLQWNFMKAG 640

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
             + LA  L+S+    L  L L  N LG  G   L+ AL        K  S L + +++ 
Sbjct: 641 AAKALAQSLQSNTFIQL--LDLQENALGDDGVVSLAGAL--------KVNSSL-MVLYLQ 689

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           G +  E  GA  LA      ++L  +++  N I   G  ALS A + N++LR LNL +N+
Sbjct: 690 GVSAGE-AGAVALAEALTVNQSLHTLDLRGNSIGMGGAKALSSALKTNRSLRSLNLQENS 748

Query: 361 ITYKGAIPLGQALSKLPSLAILNL 384
           +   GAI +  AL     L  +NL
Sbjct: 749 LGMDGAIFIATALRGNHQLTYINL 772



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 21/270 (7%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ + +  N +   G+ AL+ A   NK L  LNL +N+I  +GA  +G+AL +  +L  
Sbjct: 542 TLQTLSLRSNSVSDRGMKALTQALCYNKGLTKLNLRENSIGVEGARAIGRALQENHTLRE 601

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L   LL   G  +IA  +  N  L  ++L  N +       L +++++ T ++ +++ 
Sbjct: 602 LDLTANLLNDEGVKAIAAAVKVNRALTSLHLQWNFMKAGAAKALAQSLQSNTFIQLLDLQ 661

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
           EN  G++GV  +   +K   + ++L++   +G  + E           + A      L+ 
Sbjct: 662 ENALGDDGVVSLAGALK---VNSSLMVLYLQGVSAGE-----------AGAVALAEALTV 707

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
           N S H+ +    S         +S     +LKT   L  L+L +N+ G  G   +A  LR
Sbjct: 708 NQSLHTLDLRGNSIGMGGAKALSS-----ALKTNRSLRSLNLQENSLGMDGAIFIATALR 762

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALH 280
            +    L  + L  NG+G +G K++S A+ 
Sbjct: 763 GN--HQLTYINLQGNGIGESGAKVVSDAIR 790



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 67/137 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +AA  K  + L  + +  N +      AL+ + + N  ++ L+L +N +   G + L  A
Sbjct: 617 IAAAVKVNRALTSLHLQWNFMKAGAAKALAQSLQSNTFIQLLDLQENALGDDGVVSLAGA 676

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL +L L       AGA ++A+ LT N +L  ++L  N I + G   L  A+K  
Sbjct: 677 LKVNSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNSIGMGGAKALSSALKTN 736

Query: 122 TKLKQINVSENQFGEEG 138
             L+ +N+ EN  G +G
Sbjct: 737 RSLRSLNLQENSLGMDG 753



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 69/137 (50%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++ +++ +N +   G+ +L+ A + N  L  L L   +    GA+ L +AL+   SL  L
Sbjct: 655 IQLLDLQENALGDDGVVSLAGALKVNSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTL 714

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    +   GA +++  L  N +L  +NL  N + + G + +  A++   +L  IN+  
Sbjct: 715 DLRGNSIGMGGAKALSSALKTNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQG 774

Query: 132 NQFGEEGVEEMEKLMKS 148
           N  GE G + +   ++S
Sbjct: 775 NGIGESGAKVVSDAIRS 791



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 149/383 (38%), Gaps = 75/383 (19%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + +  V +  N I   G  AL++  + N+KL  LN+  N+I  +G   + +A
Sbjct: 449 LADALKMNQVIVSVNLQSNQIGDEGAHALAEVLQSNRKLSTLNVKKNSIGPEGVKKIAEA 508

Query: 62  LSKLPSLAILN-----LGDC------------------LLKS-----AGASSIAKYLTDN 93
           L K   L  LN     LGD                    L+S      G  ++ + L  N
Sbjct: 509 LKKNQILQDLNVSGNHLGDIGALALAQALAVNHTLQTLSLRSNSVSDRGMKALTQALCYN 568

Query: 94  TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAA 153
             L  +NL  N I V+G   + +A++    L++++++ N   +EGV+ +   +K      
Sbjct: 569 KGLTKLNLRENSIGVEGARAIGRALQENHTLRELDLTANLLNDEGVKAIAAAVKVNRALT 628

Query: 154 ALVLEDDEGECSDEEQDEESEEEN--------DSDAEGDNSNLSHNDSNHSHNASNQSHN 205
           +L L+ +  +    +   +S + N          +A GD+  +S                
Sbjct: 629 SLHLQWNFMKAGAAKALAQSLQSNTFIQLLDLQENALGDDGVVSLAG------------- 675

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
                         +LK  + L+ L L   + G  G   LA+ L  +   +L  L L  N
Sbjct: 676 --------------ALKVNSSLMVLYLQGVSAGEAGAVALAEAL--TVNQSLHTLDLRGN 719

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
            +G+ G K LS AL           +  +L+      N L  +GA  +A   +    L  
Sbjct: 720 SIGMGGAKALSSALK----------TNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTY 769

Query: 326 VEMPQNGIYHVGITALSDAFEEN 348
           + +  NGI   G   +SDA   +
Sbjct: 770 INLQGNGIGESGAKVVSDAIRSD 792


>gi|290987507|ref|XP_002676464.1| predicted protein [Naegleria gruberi]
 gi|284090066|gb|EFC43720.1| predicted protein [Naegleria gruberi]
          Length = 631

 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 175/415 (42%), Gaps = 88/415 (21%)

Query: 82  GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
            A S+ K L+ N T   V+L  N +   G ++L   ++N T + ++++  N  G +G + 
Sbjct: 90  AAKSLTKILSKNNTYTIVDLCGNRLRDTGCIELAPLLENNTSIVRLDLRSNDVGGKGAK- 148

Query: 142 MEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASN 201
                    +  AL+                    N +    D S LS  + NH      
Sbjct: 149 --------ALFNALLF-------------------NQTLTSLDLSGLSGINRNHI----- 176

Query: 202 QSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEE 259
                     +T    H+S  L+    L +L+L+ N  G  G+  L   L  +  F+L E
Sbjct: 177 ----------STKGAKHLSELLQQNQTLCQLNLASNGMGSDGIRILCRGLVDN--FSLTE 224

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L +++N +G  GC+ L+K L               L+  I  RN++ ++G  ++    K 
Sbjct: 225 LDISSNNIGSAGCEFLAKVL-----------DSTNLQKLIMERNQIGDKGVSIMCDKMKN 273

Query: 320 L--KTLERVEMPQNGIYHVGITALSDAF----------------------------EENK 349
           +   TL   ++ +N I H G+ ++ +                              E NK
Sbjct: 274 MLTPTLTYWDLTENKISHEGVLSICEMLKIDKCLKTLKIECNEFGDKGAEEFAQLLEINK 333

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L+ L L +N I  +GA  +G+ ++   +L  L L + L+K +G   I   LTD T L+ 
Sbjct: 334 TLKKLFLGENAIGDEGAKEIGKVMALNKTLKTLFLNNNLIKDSGTKRIMIGLTDGTKLKH 393

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAA 464
           ++L+ N I  + G+++ + +     LK +N+ +N+  E G +  E + K+F + +
Sbjct: 394 LDLSFNRIGDRAGVEIARVLATNRSLKTLNLKQNELKESGEQIAEAMRKNFSLTS 448



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 75/144 (52%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K L+ +++  N     G    +   E NK L+ L L +N I  +GA  +G+ ++   +L 
Sbjct: 305 KCLKTLKIECNEFGDKGAEEFAQLLEINKTLKKLFLGENAIGDEGAKEIGKVMALNKTLK 364

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L + L+K +G   I   LTD T L+ ++L+ N I  + G+++ + +     LK +N+
Sbjct: 365 TLFLNNNLIKDSGTKRIMIGLTDGTKLKHLDLSFNRIGDRAGVEIARVLATNRSLKTLNL 424

Query: 130 SENQFGEEGVEEMEKLMKSFGMAA 153
            +N+  E G +  E + K+F + +
Sbjct: 425 KQNELKESGEQIAEAMRKNFSLTS 448



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 172/440 (39%), Gaps = 93/440 (21%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNL------NDNTITYKGA 55
           LA + +   ++  +++  N +   G  AL +A   N+ L  L+L      N N I+ KGA
Sbjct: 122 LAPLLENNTSIVRLDLRSNDVGGKGAKALFNALLFNQTLTSLDLSGLSGINRNHISTKGA 181

Query: 56  IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
             L + L +  +L  LNL    + S G   + + L DN +L +++++ N I   G   L 
Sbjct: 182 KHLSELLQQNQTLCQLNLASNGMGSDGIRILCRGLVDNFSLTELDISSNNIGSAGCEFLA 241

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEE 175
           K + + T L+++ +  NQ G++GV  M   MK+  +   L   D                
Sbjct: 242 KVL-DSTNLQKLIMERNQIGDKGVSIMCDKMKNM-LTPTLTYWD---------------- 283

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
                       L+ N  +H    S                    LK    L  L +  N
Sbjct: 284 ------------LTENKISHEGVLSICEM----------------LKIDKCLKTLKIECN 315

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
            FG  G E  A LL  +    L++L L  N +G  G K + K +               L
Sbjct: 316 EFGDKGAEEFAQLLEINK--TLKKLFLGENAIGDEGAKEIGKVM----------ALNKTL 363

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           K      N +++ G K +                      +G+T       +   L+HL+
Sbjct: 364 KTLFLNNNLIKDSGTKRIM---------------------IGLT-------DGTKLKHLD 395

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L+ N I  +  + + + L+   SL  LNL    LK +G   IA+ +  N +L  ++ + N
Sbjct: 396 LSFNRIGDRAGVEIARVLATNRSLKTLNLKQNELKESG-EQIAEAMRKNFSLTSMDFSFN 454

Query: 416 EISVQGGLDLVKAMKNKTKL 435
           + S +    + +A+K   KL
Sbjct: 455 DFSYKSFSFISEALKRNDKL 474



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 7/174 (4%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L +E AK L  +  K  T   V++  N +   G   L+   E N ++  L+L  N +  K
Sbjct: 86  LGDEAAKSLTKILSKNNTYTIVDLCGNRLRDTGCIELAPLLENNTSIVRLDLRSNDVGGK 145

Query: 365 GAIPLGQALSKLPSLAILNLGDCL------LKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           GA  L  AL    +L  L+L          + + GA  +++ L  N TL  +NL  N + 
Sbjct: 146 GAKALFNALLFNQTLTSLDLSGLSGINRNHISTKGAKHLSELLQQNQTLCQLNLASNGMG 205

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             G   L + + +   L ++++S N  G  G E + K++ S  +   L++E ++
Sbjct: 206 SDGIRILCRGLVDNFSLTELDISSNNIGSAGCEFLAKVLDSTNL-QKLIMERNQ 258


>gi|46446604|ref|YP_007969.1| hypothetical protein pc0970 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400245|emb|CAF23694.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1605

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 108/204 (52%), Gaps = 10/204 (4%)

Query: 256  ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            AL  L+LN+N +   G + L+ AL   Y +        A+K F   RN++ +EGAK ++ 
Sbjct: 1371 ALSFLRLNSNQITDRGVEALAHAL--AYNT--------AIKQFWLDRNQISDEGAKAISK 1420

Query: 316  VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
                  T E + +  N I   G  A++ A   N  LR L LN N I+ KGA  + +AL+ 
Sbjct: 1421 ALTSNNTFETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAY 1480

Query: 376  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
               L  L L    +   GA +IA+ L  N TLE ++L  N+IS +G   L +A+ + T L
Sbjct: 1481 NTVLKKLALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTAL 1540

Query: 436  KQINVSENQFGEEGVEEMEKLMKS 459
            ++++++ NQ  +EG+E + + + S
Sbjct: 1541 RELSLNGNQISDEGMEALAQALAS 1564



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 12/230 (5%)

Query: 230  LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
            L L+ N     GVE LA  L  +   A+++  L+ N +   G K +SKAL     +S   
Sbjct: 1375 LRLNSNQITDRGVEALAHALAYNT--AIKQFWLDRNQISDEGAKAISKAL-----TSNNT 1427

Query: 290  GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
               ++L+      N++ +EGA+ +A       TL  + +  N I   G  A+  A   N 
Sbjct: 1428 FETISLEY-----NQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNT 1482

Query: 350  NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
             L+ L L+ N I+ +GA  + QAL+   +L  L+L    +   G  ++A+ L  NT L +
Sbjct: 1483 VLKKLALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRE 1542

Query: 410  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            ++L  N+IS +G   L +A+ + T L++++++ NQ  + G+E + + + S
Sbjct: 1543 LSLNGNQISDEGMEALAQALASNTTLRELSLNGNQISDRGMEALARTLAS 1592



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 76/138 (55%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            T E + +  N I   G  A++ A   N  LR L LN N I+ KGA  + +AL+    L  
Sbjct: 1427 TFETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKK 1486

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L L    +   GA +IA+ L  N TLE ++L  N+IS +G   L +A+ + T L++++++
Sbjct: 1487 LALSYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLN 1546

Query: 131  ENQFGEEGVEEMEKLMKS 148
             NQ  +EG+E + + + S
Sbjct: 1547 GNQISDEGMEALAQALAS 1564



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 4/155 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            L  + +  N I   G+ AL+ A   N  ++   L+ N I+ +GA  + +AL+   +   +
Sbjct: 1372 LSFLRLNSNQITDRGVEALAHALAYNTAIKQFWLDRNQISDEGAKAISKALTSNNTFETI 1431

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    +   GA +IA+ L  NTTL ++ L  N+IS +G   + KA+   T LK++ +S 
Sbjct: 1432 SLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKKLALSY 1491

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLE----DDEG 162
            NQ  +EG + + + + S      L LE     DEG
Sbjct: 1492 NQISDEGAKAIAQALASNNTLETLSLEYNQISDEG 1526



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 75/142 (52%)

Query: 331  NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
            N I   G+ AL+ A   N  ++   L+ N I+ +GA  + +AL+   +   ++L    + 
Sbjct: 1380 NQITDRGVEALAHALAYNTAIKQFWLDRNQISDEGAKAISKALTSNNTFETISLEYNQIS 1439

Query: 391  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
              GA +IA+ L  NTTL ++ L  N+IS +G   + KA+   T LK++ +S NQ  +EG 
Sbjct: 1440 DEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKKLALSYNQISDEGA 1499

Query: 451  EEMEKLMKSFGMAAALVLEDDE 472
            + + + + S      L LE ++
Sbjct: 1500 KAIAQALASNNTLETLSLEYNQ 1521



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 21/243 (8%)

Query: 37   NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
            N  L  L LN N IT +G   L  AL+   ++    L    +   GA +I+K LT N T 
Sbjct: 1369 NTALSFLRLNSNQITDRGVEALAHALAYNTAIKQFWLDRNQISDEGAKAISKALTSNNTF 1428

Query: 97   EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
            E ++L  N+IS +G   + +A+ + T L+++ ++ NQ  ++G + + K +    +   L 
Sbjct: 1429 ETISLEYNQISDEGAEAIAQALASNTTLRELFLNGNQISDKGAKAIFKALAYNTVLKKLA 1488

Query: 157  LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
            L            ++ S+E   + A+   SN      N     S + +  S++      Q
Sbjct: 1489 L----------SYNQISDEGAKAIAQALASN------NTLETLSLEYNQISDEGMEALAQ 1532

Query: 217  SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS 276
               +L +   L EL L+ N     G+E LA  L S+    L EL LN N +   G + L+
Sbjct: 1533 ---ALASNTALRELSLNGNQISDEGMEALAQALASNT--TLRELSLNGNQISDRGMEALA 1587

Query: 277  KAL 279
            + L
Sbjct: 1588 RTL 1590



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 12/164 (7%)

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            G E +A  L S+    L EL LN N +   G K + KAL   Y +         LK    
Sbjct: 1442 GAEAIAQALASNT--TLRELFLNGNQISDKGAKAIFKAL--AYNT--------VLKKLAL 1489

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
              N++ +EGAK +A       TLE + +  N I   G+ AL+ A   N  LR L+LN N 
Sbjct: 1490 SYNQISDEGAKAIAQALASNNTLETLSLEYNQISDEGMEALAQALASNTALRELSLNGNQ 1549

Query: 361  ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            I+ +G   L QAL+   +L  L+L    +   G  ++A+ L  +
Sbjct: 1550 ISDEGMEALAQALASNTTLRELSLNGNQISDRGMEALARTLASH 1593



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 75/138 (54%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            TL  + +  N I   G  A+  A   N  L+ L L+ N I+ +GA  + QAL+   +L  
Sbjct: 1455 TLRELFLNGNQISDKGAKAIFKALAYNTVLKKLALSYNQISDEGAKAIAQALASNNTLET 1514

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    +   G  ++A+ L  NT L +++L  N+IS +G   L +A+ + T L++++++
Sbjct: 1515 LSLEYNQISDEGMEALAQALASNTALRELSLNGNQISDEGMEALAQALASNTTLRELSLN 1574

Query: 131  ENQFGEEGVEEMEKLMKS 148
             NQ  + G+E + + + S
Sbjct: 1575 GNQISDRGMEALARTLAS 1592



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 15/157 (9%)

Query: 305  LENEGAKMLAAVFKKLKT--LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
            LE    + ++ + +++KT  ++R+E+ Q              +  +  L  L+ +   I+
Sbjct: 1309 LETVKKERISKILREIKTSEIDRIELFQ-------------LYRNDSWLNSLSFSYRIIS 1355

Query: 363  YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             K A  +   L+   +L+ L L    +   G  ++A  L  NT ++   L  N+IS +G 
Sbjct: 1356 DKKAEVIANGLAFNTALSFLRLNSNQITDRGVEALAHALAYNTAIKQFWLDRNQISDEGA 1415

Query: 423  LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
              + KA+ +    + I++  NQ  +EG E + + + S
Sbjct: 1416 KAISKALTSNNTFETISLEYNQISDEGAEAIAQALAS 1452


>gi|26350999|dbj|BAC39136.1| unnamed protein product [Mus musculus]
          Length = 397

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLR------------------SSCCFA----- 256
           SL     L+ LDL  N+ GP G + LAD L+                     C A     
Sbjct: 21  SLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVS 80

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              +  L+L  N +G+ G + ++ AL       K+  S   LK  +   N + + GA  L
Sbjct: 81  NQTISMLQLQKNLIGLIGAQQMADAL-------KQNRS---LKALMFSSNTIGDRGAIAL 130

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + LE +++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QAL
Sbjct: 131 AEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQAL 190

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++   
Sbjct: 191 CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNR 250

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 251 TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 286



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 40/258 (15%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L  S N  G  G   LA+ L+ +    LE L L +N +   G  +L +AL
Sbjct: 105 ALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQI--LENLDLQSNSISDMGVTVLMRAL 162

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
             C   S +  S L L+      N +  EGA+ L     +  TL+ +++  N ++  G  
Sbjct: 163 --C---SNQTLSSLNLR-----ENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQ 212

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++ A  EN +L HL+L  N I    A  LGQAL    +L  L+L +  +   GASS+A 
Sbjct: 213 AIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAG 272

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKT------------------------- 433
            L  NTTL  + L    I  QG   L +A+  N+T                         
Sbjct: 273 ALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKL 332

Query: 434 --KLKQINVSENQFGEEG 449
              L+++N+ EN  G +G
Sbjct: 333 NSSLRRLNLQENSLGMDG 350



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE++++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 130 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 189

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++  
Sbjct: 190 LCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLN 249

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 250 RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 286



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 39/370 (10%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++L  +++  N I   G  AL+DA + N+ L  L+L  N I   G + + +AL    +++
Sbjct: 26  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 85

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           +L L   L+   GA  +A  L  N +L+ +  + N I  +G + L +A+K    L+ +++
Sbjct: 86  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 145

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS--- 186
             N   + GV     LM++               CS++     +  EN    EG  +   
Sbjct: 146 QSNSISDMGVT---VLMRAL--------------CSNQTLSSLNLRENSISPEGAQALTQ 188

Query: 187 NLSHNDS-NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
            L  N++  H    +N  H+   Q+   +   + SL        L L  N         L
Sbjct: 189 ALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSL------THLHLQWNFIQAGAARAL 242

Query: 246 ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
              L+ +    L  L L  N +G  G   ++ AL       K   + +AL + +A    +
Sbjct: 243 GQALQLN--RTLTTLDLQENAIGDEGASSVAGAL-------KVNTTLIALYLQVAS---I 290

Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
            ++GA+ L       +TLE +++  N +   G  AL++A + N +LR LNL +N++   G
Sbjct: 291 GSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDG 350

Query: 366 AIPLGQALSK 375
           AI +  ALS+
Sbjct: 351 AIFVASALSE 360



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 156/372 (41%), Gaps = 67/372 (18%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +T+  +++ +N I  +G   ++DA ++N+ L+ L  + NTI  +GAI L +AL     L 
Sbjct: 82  QTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILE 141

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L    +   G + + + L  N TL  +NL  N IS +G   L +A+     LK +++
Sbjct: 142 NLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDL 201

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N   + G + +                                    + A G+N +L+
Sbjct: 202 TANLLHDRGAQAI------------------------------------AVAVGENHSLT 225

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                H H   N     + ++   + Q + +L T      LDL +NA G  G   +A  L
Sbjct: 226 -----HLHLQWNFIQAGAARALGQALQLNRTLTT------LDLQENAIGDEGASSVAGAL 274

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           + +    L  L L    +G  G + L +AL               L++     N +   G
Sbjct: 275 KVNTT--LIALYLQVASIGSQGAQALGEALTVNR----------TLEILDLRGNDVGAAG 322

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           AK LA   K   +L R+ + +N +   G   ++ A  EN  L H+NL  N        P+
Sbjct: 323 AKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGN--------PI 374

Query: 370 GQALSKLPSLAI 381
           G++ +++ S AI
Sbjct: 375 GESAARMISEAI 386



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA + N+ L  L+L  N I 
Sbjct: 8   NQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIK 67

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G + + +AL    ++++L L   L+   GA  +A  L  N +L+ +  + N I  +G 
Sbjct: 68  DDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGA 127

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L +A+K    L+ +++  N   + GV  + + + S
Sbjct: 128 IALAEALKVNQILENLDLQSNSISDMGVTVLMRALCS 164



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  +++ +N I   G ++++ A + N  L  L L   +I  +GA  LG+AL+   +L 
Sbjct: 250 RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLE 309

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           IL+L    + +AGA ++A  L  N++L  +NL  N + + G + +  A+     L  IN+
Sbjct: 310 ILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINL 369

Query: 130 SENQFGEEGVEEMEKLMKS 148
             N  GE     + + +K+
Sbjct: 370 QGNPIGESAARMISEAIKT 388


>gi|320165491|gb|EFW42390.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 836

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 180/457 (39%), Gaps = 90/457 (19%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+F + K+   VE+  + I       +++  + N  L+ LNLNDN I  KGA  +G AL 
Sbjct: 11  ALFAQAKSSRSVELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDKGAKAIGSALR 70

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
               L+ L LG   +  AGA +IA+ +     +  + L  N+I   G   +  A++NK K
Sbjct: 71  NKRILSGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQAIGLALRNKPK 130

Query: 124 LKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
           L  + + EN  G+ G   + E L+ S  +    + ++  G               D+ A+
Sbjct: 131 LSTLFLFENSIGDTGARAIAEGLLASTALTDLRMYDNQIG---------------DAGAQ 175

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGV 242
              S L                       N +N S + L T           N  G IG 
Sbjct: 176 AIGSAL----------------------RNKTNLSSLHLNT-----------NKIGDIGA 202

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 302
             +A+ L S+   AL +L ++ N +G  G + +  AL +    SK          F   +
Sbjct: 203 RAIAEGLTST---ALTQLGMHTNEIGEAGARAIGTALRNKANLSK----------FYLSK 249

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + + GA  +A   +    L  + M    I   G  A+  A     NL  L ++ N IT
Sbjct: 250 NNIGDAGASAIAEGLQTSSALTDLRMNATQIGDTGAQAIGFALRNKPNLSALGVDTNKIT 309

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G                            A +IA+ L  +T L  + +  N+I   G 
Sbjct: 310 DAG----------------------------ARAIAEGLKTSTALTQLAMNANQIGDVGA 341

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +  A+++K  L ++NVS+NQ     V+ +   + S
Sbjct: 342 QAIGSALQSKVFLSKLNVSDNQISSSAVQFLSSCVPS 378



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 161/380 (42%), Gaps = 40/380 (10%)

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
             V L  +EI+    L + + +K  + L+ +N+++NQ G++G + +   +++  + + L 
Sbjct: 20  RSVELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDKGAKAIGSALRNKRILSGLY 79

Query: 157 LED----DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN 212
           L      D G  +  E  + + E                   H     NQ  +   Q+  
Sbjct: 80  LGGNSIGDAGARAIAEAVKTAPE-----------------MTHLWLYKNQIDDAGAQAIG 122

Query: 213 TSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
                 ++L+   +L  L L +N+ G  G   +A+ L +S   AL +L++ +N +G  G 
Sbjct: 123 ------LALRNKPKLSTLFLFENSIGDTGARAIAEGLLAST--ALTDLRMYDNQIGDAGA 174

Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
           + +  AL +     K   S L L       N++ + GA+ +A        L ++ M  N 
Sbjct: 175 QAIGSALRN-----KTNLSSLHLNT-----NKIGDIGARAIAEGLTS-TALTQLGMHTNE 223

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
           I   G  A+  A     NL    L+ N I   GA  + + L    +L  L +    +   
Sbjct: 224 IGEAGARAIGTALRNKANLSKFYLSKNNIGDAGASAIAEGLQTSSALTDLRMNATQIGDT 283

Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
           GA +I   L +   L  + +  N+I+  G   + + +K  T L Q+ ++ NQ G+ G + 
Sbjct: 284 GAQAIGFALRNKPNLSALGVDTNKITDAGARAIAEGLKTSTALTQLAMNANQIGDVGAQA 343

Query: 453 MEKLMKSFGMAAALVLEDDE 472
           +   ++S    + L + D++
Sbjct: 344 IGSALQSKVFLSKLNVSDNQ 363



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 5/156 (3%)

Query: 315 AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
           A+F + K+   VE+  + I       +++  + N NL+ LNLNDN I  KGA  +G AL 
Sbjct: 11  ALFAQAKSSRSVELQNSEITDADALVIAEGLKANSNLQTLNLNDNQIGDKGAKAIGSALR 70

Query: 375 KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 434
               L+ L LG   +  AGA +IA+ +     +  + L  N+I   G   +  A++NK K
Sbjct: 71  NKRILSGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQAIGLALRNKPK 130

Query: 435 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           L  + + EN  G+ G   + +     G+ A+  L D
Sbjct: 131 LSTLFLFENSIGDTGARAIAE-----GLLASTALTD 161



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 10/287 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +  +  + L  + +  N I   G  A+++A +   ++ HL L  N I   GA  +G A
Sbjct: 65  IGSALRNKRILSGLYLGGNSIGDAGARAIAEAVKTAPEMTHLWLYKNQIDDAGAQAIGLA 124

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   P L+ L L +  +   GA +IA+ L  +T L D+ +  N+I   G   +  A++NK
Sbjct: 125 LRNKPKLSTLFLFENSIGDTGARAIAEGLLASTALTDLRMYDNQIGDAGAQAIGSALRNK 184

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEE-------QDEESE 174
           T L  ++++ N+ G+ G   + + + S  +    +  ++ GE            +   S+
Sbjct: 185 TNLSSLHLNTNKIGDIGARAIAEGLTSTALTQLGMHTNEIGEAGARAIGTALRNKANLSK 244

Query: 175 EENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLS 233
                +  GD    +  +   + +A      N+ Q  +T  Q+   +L+    L  L + 
Sbjct: 245 FYLSKNNIGDAGASAIAEGLQTSSALTDLRMNATQIGDTGAQAIGFALRNKPNLSALGVD 304

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
            N     G   +A+ L++S   AL +L +N N +G  G + +  AL 
Sbjct: 305 TNKITDAGARAIAEGLKTST--ALTQLAMNANQIGDVGAQAIGSALQ 349


>gi|326433982|gb|EGD79552.1| hypothetical protein PTSG_12997 [Salpingoeca sp. ATCC 50818]
          Length = 2282

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 12/219 (5%)

Query: 231 DLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEG 290
           DL  +  G IG   +A+ L+ + C  L+ L L +N +G  G   L++ L       K   
Sbjct: 159 DLGRDGLGDIGARAVAEALKDNTC--LKGLALWDNSIGDEGAVALAEML-------KHNT 209

Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
           +   L ++   RN +  EGA  LA + K    LE++ +  N I   G  AL++  + N  
Sbjct: 210 TLTGLDLW---RNSIGPEGAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTT 266

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           L  L LN+N++  +GA+ L + L    ++  L+L +  +   GA ++A+ L  NTTLE++
Sbjct: 267 LEELYLNNNSMGDEGAVALAEMLKHNTTMTWLDLNNNSIGDKGAVALAEMLKHNTTLEEL 326

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            L  N I  +G + L + +K+ T L+++ +  N     G
Sbjct: 327 YLYNNRIGDEGAVALAEMLKHNTALEELYLDNNSITPVG 365



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 14/225 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L L DN+ G  G   LA++L+ +    L  L L  N +G  G   L++ L
Sbjct: 176 ALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNT--TLTGLDLWRNSIGPEGAVALAEML 233

Query: 280 -HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
            H+            AL+      NR+  EGA  LA + K   TLE + +  N +   G 
Sbjct: 234 KHNT-----------ALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNSMGDEGA 282

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            AL++  + N  +  L+LN+N+I  KGA+ L + L    +L  L L +  +   GA ++A
Sbjct: 283 VALAEMLKHNTTMTWLDLNNNSIGDKGAVALAEMLKHNTTLEELYLYNNRIGDEGAVALA 342

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           + L  NT LE++ L  N I+  GG  L  A+     L ++++ +N
Sbjct: 343 EMLKHNTALEELYLDNNSITPVGGAALGAALDENRTLSRLDIEKN 387



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 49/269 (18%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E  ++ ++G+  +G  A+++A ++N  L+ L L DN+I  +GA+ L + L    +L  L+
Sbjct: 156 EIADLGRDGLGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLD 215

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    +   GA ++A+ L  NT LE + L  N I  +G   L + +K+ T L+++ ++ N
Sbjct: 216 LWRNSIGPEGAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNN 275

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
             G+EG   + +++K                                     N+ ++  D
Sbjct: 276 SMGDEGAVALAEMLKH------------------------------------NTTMTWLD 299

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
            N          NNS         + M LK    L EL L +N  G  G   LA++L+ +
Sbjct: 300 LN----------NNSIGDKGAVALAEM-LKHNTTLEELYLYNNRIGDEGAVALAEMLKHN 348

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHD 281
              ALEEL L+NN +   G   L  AL +
Sbjct: 349 T--ALEELYLDNNSITPVGGAALGAALDE 375



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 85/158 (53%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           GR+ L + GA+ +A   K    L+ + +  N I   G  AL++  + N  L  L+L  N+
Sbjct: 161 GRDGLGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLDLWRNS 220

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I  +GA+ L + L    +L  L L    +   GA+++A+ L  NTTLE++ L  N +  +
Sbjct: 221 IGPEGAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNSMGDE 280

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           G + L + +K+ T +  ++++ N  G++G   + +++K
Sbjct: 281 GAVALAEMLKHNTTMTWLDLNNNSIGDKGAVALAEMLK 318



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 77/135 (57%)

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
           E  ++ ++G+  +G  A+++A ++N  L+ L L DN+I  +GA+ L + L    +L  L+
Sbjct: 156 EIADLGRDGLGDIGARAVAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLD 215

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           L    +   GA ++A+ L  NT LE + L  N I  +G   L + +K+ T L+++ ++ N
Sbjct: 216 LWRNSIGPEGAVALAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNN 275

Query: 444 QFGEEGVEEMEKLMK 458
             G+EG   + +++K
Sbjct: 276 SMGDEGAVALAEMLK 290



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 72/137 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K    LE + +  N I   G  AL++  + N  L  L LN+N++  +GA+ L + 
Sbjct: 229 LAEMLKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNSMGDEGAVALAEM 288

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L+L +  +   GA ++A+ L  NTTLE++ L  N I  +G + L + +K+ 
Sbjct: 289 LKHNTTMTWLDLNNNSIGDKGAVALAEMLKHNTTLEELYLYNNRIGDEGAVALAEMLKHN 348

Query: 122 TKLKQINVSENQFGEEG 138
           T L+++ +  N     G
Sbjct: 349 TALEELYLDNNSITPVG 365



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 69/131 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K   TLE + +  N +   G  AL++  + N  +  L+LN+N+I  KGA+ L + 
Sbjct: 257 LAEMLKHNTTLEELYLNNNSMGDEGAVALAEMLKHNTTMTWLDLNNNSIGDKGAVALAEM 316

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +   GA ++A+ L  NT LE++ L  N I+  GG  L  A+   
Sbjct: 317 LKHNTTLEELYLYNNRIGDEGAVALAEMLKHNTALEELYLDNNSITPVGGAALGAALDEN 376

Query: 122 TKLKQINVSEN 132
             L ++++ +N
Sbjct: 377 RTLSRLDIEKN 387



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 77/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K    L+ + +  N I   G  AL++  + N  L  L+L  N+I  +GA+ L + 
Sbjct: 173 VAEALKDNTCLKGLALWDNSIGDEGAVALAEMLKHNTTLTGLDLWRNSIGPEGAVALAEM 232

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    +   GA+++A+ L  NTTLE++ L  N +  +G + L + +K+ 
Sbjct: 233 LKHNTALEQLFLMSNRIGPEGAAALAEMLKHNTTLEELYLNNNSMGDEGAVALAEMLKHN 292

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T +  ++++ N  G++G   + +++K
Sbjct: 293 TTMTWLDLNNNSIGDKGAVALAEMLK 318



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 24/175 (13%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L +L L  N  GP G   LA++L+ +    LEEL LNNN +G  G   L++ L 
Sbjct: 233 LKHNTALEQLFLMSNRIGPEGAAALAEMLKHNT--TLEELYLNNNSMGDEGAVALAEMLK 290

Query: 281 --------DCYESSKKEGSPLALKVFIAGR----------NRLENEGAKMLAAVFKKLKT 322
                   D   +S  +   +AL   +             NR+ +EGA  LA + K    
Sbjct: 291 HNTTMTWLDLNNNSIGDKGAVALAEMLKHNTTLEELYLYNNRIGDEGAVALAEMLKHNTA 350

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI----TYKGAIPLGQAL 373
           LE + +  N I  VG  AL  A +EN+ L  L++  N+      +  A+P+ + L
Sbjct: 351 LEELYLDNNSITPVGGAALGAALDENRTLSRLDIEKNSTATARAFGAALPVDRVL 405



 Score = 39.7 bits (91), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 43/90 (47%)

Query: 53  KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 112
           K A+ LG+ + +L  L +LNL    +   GA+++++       +  + L  N I+  G  
Sbjct: 807 KAAVVLGRHMHQLNHLRVLNLSHNAIGDVGANALSEPFFGQCCIATLGLDGNRITAAGVE 866

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
            L +AM     L  I++  N   EEGV  M
Sbjct: 867 CLARAMVANELLSTISLVNNPVSEEGVGPM 896



 Score = 39.7 bits (91), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 43/90 (47%)

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
           K A+ LG+ + +L  L +LNL    +   GA+++++       +  + L  N I+  G  
Sbjct: 807 KAAVVLGRHMHQLNHLRVLNLSHNAIGDVGANALSEPFFGQCCIATLGLDGNRITAAGVE 866

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            L +AM     L  I++  N   EEGV  M
Sbjct: 867 CLARAMVANELLSTISLVNNPVSEEGVGPM 896


>gi|395515531|ref|XP_003761956.1| PREDICTED: protein NLRC3 [Sarcophilus harrisii]
          Length = 1153

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 130/284 (45%), Gaps = 27/284 (9%)

Query: 208  NQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNG 266
            NQ HN   ++   SL     L  LDL +N+ GP G + LAD L+ +    L  L L NN 
Sbjct: 764  NQIHNKGAKALARSLLVNRSLTVLDLRNNSIGPQGAKALADSLKIN--RVLISLSLQNNV 821

Query: 267  LGITGCKLLSKAL---------------------HDCYESSKKEGSPLALKVFIAGRNRL 305
            +   G K ++ AL                         ++ KK GS   LK  +   N +
Sbjct: 822  IKDEGAKFIADALMVNHMLSMLHLQKNSIGSLGAKPIADALKKNGS---LKELMLSSNSV 878

Query: 306  ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
             N+G+K LA   K  + L  +++  N I   G+ AL+ A   N  L  LNL +N+I+  G
Sbjct: 879  GNDGSKALAEALKVNQGLITLDLQSNSISDAGVAALTRALCINHTLLSLNLRENSISPDG 938

Query: 366  AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 425
            A  +  AL    +L  L+L   LL   GA +IA  + +N  L  ++L  N I V     L
Sbjct: 939  AQEIASALRSNQALQNLDLTANLLHDQGAQAIAAAVKENRVLRTLHLQWNFIQVNAAKAL 998

Query: 426  VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
             +A++    L  +++ EN  G+EG+  + + +K      AL L+
Sbjct: 999  GQALQFNRSLTSLDLQENAIGDEGMMALARALKMNTSLTALYLQ 1042



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 198/448 (44%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I++ G  AL+ +   N+ L  L+L +N+I  +GA  L  +L     L  L
Sbjct: 756  IQKISLAENQIHNKGAKALARSLLVNRSLTVLDLRNNSIGPQGAKALADSLKINRVLISL 815

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L + ++K  GA  IA  L  N  L  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 816  SLQNNVIKDEGAKFIADALMVNHMLSMLHLQKNSIGSLGAKPIADALKKNGSLKELMLSS 875

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G +G +           A A  L+ ++G  +    D +S   +D+        L  N
Sbjct: 876  NSVGNDGSK-----------ALAEALKVNQGLIT---LDLQSNSISDAGVAALTRALCIN 921

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L+L +N+  P G + +A  LRS
Sbjct: 922  HT---------------------------------LLSLNLRENSISPDGAQEIASALRS 948

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +   AL+ L L  N L   G + ++ A+        KE     L+      N ++   AK
Sbjct: 949  NQ--ALQNLDLTANLLHDQGAQAIAAAV--------KENR--VLRTLHLQWNFIQVNAAK 996

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G+ AL+ A + N +L  L L   +I   GA  LG 
Sbjct: 997  ALGQALQFNRSLTSLDLQENAIGDEGMMALARALKMNTSLTALYLQVASIGVLGAQALGD 1056

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    + +AGA +IA  L  N++L  +NL  N + + G + +  A+ N
Sbjct: 1057 ALAVNKTLEILDLRGNSIGAAGAKAIANALKINSSLRMLNLQENSLGMDGAICIATALTN 1116

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
                K IN+  N  GE G   + + +K+
Sbjct: 1117 NHGFKHINLQGNHIGESGARMISEAIKT 1144



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 77/157 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  + L  +++  N I   G+ AL+ A   N  L  LNL +N+I+  GA  +  A
Sbjct: 886  LAEALKVNQGLITLDLQSNSISDAGVAALTRALCINHTLLSLNLRENSISPDGAQEIASA 945

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L+L   LL   GA +IA  + +N  L  ++L  N I V     L +A++  
Sbjct: 946  LRSNQALQNLDLTANLLHDQGAQAIAAAVKENRVLRTLHLQWNFIQVNAAKALGQALQFN 1005

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
              L  +++ EN  G+EG+  + + +K      AL L+
Sbjct: 1006 RSLTSLDLQENAIGDEGMMALARALKMNTSLTALYLQ 1042



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 28/390 (7%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+D+ + N+ L  L+L +N I  +GA  +  AL     L+
Sbjct: 782  RSLTVLDLRNNSIGPQGAKALADSLKINRVLISLSLQNNVIKDEGAKFIADALMVNHMLS 841

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    + S GA  IA  L  N +L+++ L+ N +   G   L +A+K    L  +++
Sbjct: 842  MLHLQKNSIGSLGAKPIADALKKNGSLKELMLSSNSVGNDGSKALAEALKVNQGLITLDL 901

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD-NSNL 188
              N   + GV  + + +       +L L ++       ++   +   N +    D  +NL
Sbjct: 902  QSNSISDAGVAALTRALCINHTLLSLNLRENSISPDGAQEIASALRSNQALQNLDLTANL 961

Query: 189  SHNDSNHSHNASNQSHNNSNQSH--------NTSNQSHMSLKTGARLVELDLSDNAFGPI 240
             H+    +  A+ + +      H        N +     +L+    L  LDL +NA G  
Sbjct: 962  LHDQGAQAIAAAVKENRVLRTLHLQWNFIQVNAAKALGQALQFNRSLTSLDLQENAIGDE 1021

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            G+  LA  L+ +   +L  L L    +G+ G    ++AL D    +K       L++   
Sbjct: 1022 GMMALARALKMNT--SLTALYLQVASIGVLG----AQALGDALAVNK------TLEILDL 1069

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
              N +   GAK +A   K   +L  + + +N +   G   ++ A   N   +H+NL  N 
Sbjct: 1070 RGNSIGAAGAKAIANALKINSSLRMLNLQENSLGMDGAICIATALTNNHGFKHINLQGNH 1129

Query: 361  ITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
            I   GA  + +A+         N  DC+++
Sbjct: 1130 IGESGARMISEAIKT-------NAPDCIVE 1152



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   KK  +L+ + +  N + + G  AL++A + N+ L  L+L  N+I+  G   L +A
Sbjct: 858 IADALKKNGSLKELMLSSNSVGNDGSKALAEALKVNQGLITLDLQSNSISDAGVAALTRA 917

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL +  +   GA  IA  L  N  L++++LT N +  QG   +  A+K  
Sbjct: 918 LCINHTLLSLNLRENSISPDGAQEIASALRSNQALQNLDLTANLLHDQGAQAIAAAVKEN 977

Query: 122 TKLKQINVSEN 132
             L+ +++  N
Sbjct: 978 RVLRTLHLQWN 988



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +AA  K+ + L  + +  N I      AL  A + N+ L  L+L +N I  +G + L +A
Sbjct: 970  IAAAVKENRVLRTLHLQWNFIQVNAAKALGQALQFNRSLTSLDLQENAIGDEGMMALARA 1029

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    SL  L L    +   GA ++   L  N TLE ++L  N I   G   +  A+K  
Sbjct: 1030 LKMNTSLTALYLQVASIGVLGAQALGDALAVNKTLEILDLRGNSIGAAGAKAIANALKIN 1089

Query: 122  TKLKQINVSENQFGEEG 138
            + L+ +N+ EN  G +G
Sbjct: 1090 SSLRMLNLQENSLGMDG 1106



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A+  +  + L+++++  N ++  G  A++ A +EN+ LR L+L  N I    A  LGQA
Sbjct: 942  IASALRSNQALQNLDLTANLLHDQGAQAIAAAVKENRVLRTLHLQWNFIQVNAAKALGQA 1001

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-N 120
            L    SL  L+L +  +   G  ++A+ L  NT+L  + L    I V G   L  A+  N
Sbjct: 1002 LQFNRSLTSLDLQENAIGDEGMMALARALKMNTSLTALYLQVASIGVLGAQALGDALAVN 1061

Query: 121  KT 122
            KT
Sbjct: 1062 KT 1063


>gi|326427735|gb|EGD73305.1| hypothetical protein PTSG_12243 [Salpingoeca sp. ATCC 50818]
          Length = 938

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 186/427 (43%), Gaps = 35/427 (8%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G+ AL++  + N  +  L+L  N I  +GA+ L + L    ++  LNL    + 
Sbjct: 91  NNIGDEGVAALAEMLKHNTTMTSLSLWRNDIGPEGAVALAEMLKHNTNIEELNLAANSIG 150

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
             G  + A+ L  NT L+ ++L  N I+  GG  L  A+     L+ +++  N       
Sbjct: 151 GEGVVAFAEMLKHNTALKTLDLGDNSITPVGGTALGAALDQNRTLEGLDIKGNSAATARA 210

Query: 140 EEME-KLMKSFGMAAALVLEDDEGECS-DEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
                 + +  G    +  +D EG+ + +E + +       ++  GD   L  ND   S 
Sbjct: 211 FGAALPVDREIGT---IWYDDKEGKAAFNEARKKNKIRAIANNTCGDEVRLVGNDLGDSE 267

Query: 198 NASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
                           + +   +LK    L EL L  N+    G   LA +L+ +   +L
Sbjct: 268 ----------------TREVAEALKDNTCLKELILVHNSISDKGAVALAKVLKHNK--SL 309

Query: 258 EELKLNNNGLGITGCKLLSKAL-HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
            EL L  N + + G   L++ L H+   +       L+L+      N + ++GA  LA V
Sbjct: 310 TELNLQGNSISVEGAVALAEMLKHNTTITG------LSLE-----SNSISDKGAVALAKV 358

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            K   TLER+ +  N I   G  AL++  + N  L  L LNDNTI  KGA+ + + L   
Sbjct: 359 LKHNTTLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLNDNTIGDKGAVAMTEMLKHN 418

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            SL  L L    +    A ++A+ L  N TL+ + L  N I+  GG  L  A+     L+
Sbjct: 419 KSLTALVLESNSIGDQVAVALAEVLKQNMTLQYLFLGDNSITPVGGTALGAALDQNRTLE 478

Query: 437 QINVSEN 443
            +++  N
Sbjct: 479 GLDIKGN 485



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 49/386 (12%)

Query: 108 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDE 167
           V G   + +A+K+ T L  + +  N  G+EGV  + +++K      +L L          
Sbjct: 67  VSGARAVAEALKDNTCLNTLWLGGNNIGDEGVAALAEMLKHNTTMTSLSL---------- 116

Query: 168 EQDEESEEENDSDAEGDNS---NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTG 224
                    ND   EG  +    L HN +    N +     NS         + M LK  
Sbjct: 117 -------WRNDIGPEGAVALAEMLKHNTNIEELNLA----ANSIGGEGVVAFAEM-LKHN 164

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC--------KLLS 276
             L  LDL DN+  P+G   L   L  +    LE L +  N               + + 
Sbjct: 165 TALKTLDLGDNSITPVGGTALGAALDQN--RTLEGLDIKGNSAATARAFGAALPVDREIG 222

Query: 277 KALHD------CYESSKKEGSPLAL-------KVFIAGRNRLENEGAKMLAAVFKKLKTL 323
              +D       +  ++K+    A+       +V + G N L +   + +A   K    L
Sbjct: 223 TIWYDDKEGKAAFNEARKKNKIRAIANNTCGDEVRLVG-NDLGDSETREVAEALKDNTCL 281

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
           + + +  N I   G  AL+   + NK+L  LNL  N+I+ +GA+ L + L    ++  L+
Sbjct: 282 KELILVHNSISDKGAVALAKVLKHNKSLTELNLQGNSISVEGAVALAEMLKHNTTITGLS 341

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           L    +   GA ++AK L  NTTLE ++L  N IS +G + L + +K+ T L+ + +++N
Sbjct: 342 LESNSISDKGAVALAKVLKHNTTLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLNDN 401

Query: 444 QFGEEGVEEMEKLMKSFGMAAALVLE 469
             G++G   M +++K      ALVLE
Sbjct: 402 TIGDKGAVAMTEMLKHNKSLTALVLE 427



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 85/157 (54%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K    L+ + +  N I   G  AL+   + NK L  LNL  N+I+ +GA+ L + 
Sbjct: 271 VAEALKDNTCLKELILVHNSISDKGAVALAKVLKHNKSLTELNLQGNSISVEGAVALAEM 330

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L+L    +   GA ++AK L  NTTLE ++L  N IS +G + L + +K+ 
Sbjct: 331 LKHNTTITGLSLESNSISDKGAVALAKVLKHNTTLERLSLQGNPISTEGAVALAEMLKHN 390

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           T L+ + +++N  G++G   M +++K      ALVLE
Sbjct: 391 TTLEGLGLNDNTIGDKGAVAMTEMLKHNKSLTALVLE 427



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 14/203 (6%)

Query: 258 EELKLNNNGLGITGCKLLSKALHD--CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           +E++L  N LG +  + +++AL D  C            LK  I   N + ++GA  LA 
Sbjct: 254 DEVRLVGNDLGDSETREVAEALKDNTC------------LKELILVHNSISDKGAVALAK 301

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           V K  K+L  + +  N I   G  AL++  + N  +  L+L  N+I+ KGA+ L + L  
Sbjct: 302 VLKHNKSLTELNLQGNSISVEGAVALAEMLKHNTTITGLSLESNSISDKGAVALAKVLKH 361

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L  L+L    + + GA ++A+ L  NTTLE + L  N I  +G + + + +K+   L
Sbjct: 362 NTTLERLSLQGNPISTEGAVALAEMLKHNTTLEGLGLNDNTIGDKGAVAMTEMLKHNKSL 421

Query: 436 KQINVSENQFGEEGVEEMEKLMK 458
             + +  N  G++    + +++K
Sbjct: 422 TALVLESNSIGDQVAVALAEVLK 444



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 151/389 (38%), Gaps = 89/389 (22%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDN------------- 48
            A + K    L+ +++  N I  VG TAL  A ++N+ L  L++  N             
Sbjct: 157 FAEMLKHNTALKTLDLGDNSITPVGGTALGAALDQNRTLEGLDIKGNSAATARAFGAALP 216

Query: 49  ------TITY-----KGAIPLGQALSKLPSLAILNLGDCL------LKSAGASSIAKYLT 91
                 TI Y     K A    +  +K+ ++A    GD +      L  +    +A+ L 
Sbjct: 217 VDREIGTIWYDDKEGKAAFNEARKKNKIRAIANNTCGDEVRLVGNDLGDSETREVAEALK 276

Query: 92  DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
           DNT L+++ L  N IS +G + L K +K+   L ++N+  N    EG   + +++K    
Sbjct: 277 DNTCLKELILVHNSISDKGAVALAKVLKHNKSLTELNLQGNSISVEGAVALAEMLKHNTT 336

Query: 152 AAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSH 211
              L LE              S   +D  A      L HN +                  
Sbjct: 337 ITGLSLE--------------SNSISDKGAVALAKVLKHNTT------------------ 364

Query: 212 NTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG 271
                          L  L L  N     G   LA++L+ +    LE L LN+N +G  G
Sbjct: 365 ---------------LERLSLQGNPISTEGAVALAEMLKHNTT--LEGLGLNDNTIGDKG 407

Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
              +++ L              +L   +   N + ++ A  LA V K+  TL+ + +  N
Sbjct: 408 AVAMTEMLKHNK----------SLTALVLESNSIGDQVAVALAEVLKQNMTLQYLFLGDN 457

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNT 360
            I  VG TAL  A ++N+ L  L++  N+
Sbjct: 458 SITPVGGTALGAALDQNRTLEGLDIKGNS 486



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 57/104 (54%)

Query: 44  NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 103
           NL++      GA  + +AL     L  L LG   +   G +++A+ L  NTT+  ++L  
Sbjct: 59  NLDEMANGVSGARAVAEALKDNTCLNTLWLGGNNIGDEGVAALAEMLKHNTTMTSLSLWR 118

Query: 104 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           N+I  +G + L + +K+ T ++++N++ N  G EGV    +++K
Sbjct: 119 NDIGPEGAVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEMLK 162



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 57/104 (54%)

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
           NL++      GA  + +AL     L  L LG   +   G +++A+ L  NTT+  ++L  
Sbjct: 59  NLDEMANGVSGARAVAEALKDNTCLNTLWLGGNNIGDEGVAALAEMLKHNTTMTSLSLWR 118

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N+I  +G + L + +K+ T ++++N++ N  G EGV    +++K
Sbjct: 119 NDIGPEGAVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEMLK 162



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            E+++   NG+   G  A+++A ++N  L  L L  N I  +G   L + L    ++  L
Sbjct: 57  FENLDEMANGVS--GARAVAEALKDNTCLNTLWLGGNNIGDEGVAALAEMLKHNTTMTSL 114

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    +   GA ++A+ L  NT +E++NL  N I  +G +   + +K+ T LK +++ +
Sbjct: 115 SLWRNDIGPEGAVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEMLKHNTALKTLDLGD 174

Query: 132 NQFGEEG 138
           N     G
Sbjct: 175 NSITPVG 181



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           NG+   G  A+++A ++N  L  L L  N I  +G   L + L    ++  L+L    + 
Sbjct: 65  NGVS--GARAVAEALKDNTCLNTLWLGGNNIGDEGVAALAEMLKHNTTMTSLSLWRNDIG 122

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             GA ++A+ L  NT +E++NL  N I  +G +   + +K+ T LK +++ +N     G
Sbjct: 123 PEGAVALAEMLKHNTNIEELNLAANSIGGEGVVAFAEMLKHNTALKTLDLGDNSITPVG 181


>gi|320170766|gb|EFW47665.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 459

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 15/235 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    +  L LS+N    IG   +A+ L+ +    L  L L +N +G  G + +++AL
Sbjct: 77  TLKVNTSVTSLGLSEN---QIGANAIAEALKVNAT--LTWLNLGDNQIGDAGARAIAEAL 131

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +   L +   G+N++ + GA+ +A   K   T+ R+ + QN I   G  
Sbjct: 132 -------KVNTTVTTLDL---GKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGAQ 181

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++  + NK L  L L DN I+  GA P+ +AL    +L  L+LG   + + G  +IA+
Sbjct: 182 AIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAE 241

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            L  NT+L + NL  N+I  +G   + +A+K  T +K++N++ N  G+   + ++
Sbjct: 242 ALKVNTSLTEHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQ 296



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 124/257 (48%), Gaps = 23/257 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+  A +  LDL  N     G   +A+ L+ +    L EL L  N +G  G + +++ L
Sbjct: 21  ALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTT--LTELFLYGNQIGDAGARTIAETL 78

Query: 280 ------------------HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                             +   E+ K   +   L +   G N++ + GA+ +A   K   
Sbjct: 79  KVNTSVTSLGLSENQIGANAIAEALKVNATLTWLNL---GDNQIGDAGARAIAEALKVNT 135

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           T+  +++ +N I   G  A+++A + N  +  L L+ N I   GA  + + L    +L+ 
Sbjct: 136 TVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSE 195

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L LGD  +  AGA+ IA+ L  NTTL  ++L  N+I   G + + +A+K  T L + N++
Sbjct: 196 LYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLN 255

Query: 442 ENQFGEEGVEEMEKLMK 458
            NQ G+EG + + + +K
Sbjct: 256 VNQIGDEGAKAIAEALK 272



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 77/142 (54%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  + + QN I   G  A+++  + NK L  L L DN I+  GA P+ +A
Sbjct: 155 IAEALKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEA 214

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+LG   + + G  +IA+ L  NT+L + NL  N+I  +G   + +A+K  
Sbjct: 215 LKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDEGAKAIAEALKVN 274

Query: 122 TKLKQINVSENQFGEEGVEEME 143
           T +K++N++ N  G+   + ++
Sbjct: 275 TSVKKLNLAFNCIGKVAAQAIQ 296



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 80/146 (54%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  +++ +N I   G  A+++A + N  +  L L+ N I   GA  + + 
Sbjct: 127 IAEALKVNTTVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQIGEAGAQAIAET 186

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+ L LGD  +  AGA+ IA+ L  NTTL  ++L  N+I   G + + +A+K  
Sbjct: 187 LKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKVN 246

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L + N++ NQ G+EG + + + +K
Sbjct: 247 TSLTEHNLNVNQIGDEGAKAIAEALK 272



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 52/278 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +  N I   G   +++  + N  +  L L++N I   GA  + +A
Sbjct: 46  IAETLKVNTTLTELFLYGNQIGDAGARTIAETLKVNTSVTSLGLSENQI---GANAIAEA 102

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNLGD  +  AGA +IA+ L  NTT+  ++L  N+I   G   + +A+K  
Sbjct: 103 LKVNATLTWLNLGDNQIGDAGARAIAEALKVNTTVTTLDLGKNQIGDAGAQAIAEALKVN 162

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           T + ++ + +NQ GE G + + + +K     + L L D+    SD      +E       
Sbjct: 163 TTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDN--RISDAGATPIAE------- 213

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
                                                 +LK    L  LDL  N  G +G
Sbjct: 214 --------------------------------------ALKVNTTLTALDLGKNQIGNLG 235

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +  +A+ L+ +   +L E  LN N +G  G K +++AL
Sbjct: 236 MMAIAEALKVNT--SLTEHNLNVNQIGDEGAKAIAEAL 271



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 147/353 (41%), Gaps = 66/353 (18%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           GA  + +AL     +  L+LG   +  AGA +IA+ L  NTTL ++ L  N+I   G   
Sbjct: 14  GAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGDAGART 73

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           + + +K  T +  + +SENQ G   + E  K+  +      L L D+             
Sbjct: 74  IAETLKVNTSVTSLGLSENQIGANAIAEALKVNATLTW---LNLGDN------------- 117

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDL 232
            +  D+ A      L  N +  + +         NQ  +   Q+   +LK    +  L L
Sbjct: 118 -QIGDAGARAIAEALKVNTTVTTLDLG------KNQIGDAGAQAIAEALKVNTTVTRLYL 170

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
             N  G  G + +A+ L+ +    L EL L +N +   G   +++AL             
Sbjct: 171 DQNQIGEAGAQAIAETLKVNKT--LSELYLGDNRISDAGATPIAEAL------------- 215

Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
                                    K   TL  +++ +N I ++G+ A+++A + N +L 
Sbjct: 216 -------------------------KVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLT 250

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLG-DCLLK-SAGASSIAKYLTD 403
             NLN N I  +GA  + +AL    S+  LNL  +C+ K +A A   A+ LT+
Sbjct: 251 EHNLNVNQIGDEGAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQDARPLTE 303



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 3/164 (1%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GAK +A   +    +  +++ +N I   G   +++  + N  L  L L  N I   GA  
Sbjct: 14  GAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYGNQIGDAGART 73

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + + L    S+  L L +      GA++IA+ L  N TL  +NL  N+I   G   + +A
Sbjct: 74  IAETLKVNTSVTSLGLSE---NQIGANAIAEALKVNATLTWLNLGDNQIGDAGARAIAEA 130

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           +K  T +  +++ +NQ G+ G + + + +K       L L+ ++
Sbjct: 131 LKVNTTVTTLDLGKNQIGDAGAQAIAEALKVNTTVTRLYLDQNQ 174



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 3/132 (2%)

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
            +P+  I   G  A+++A   N  +  L+L  N I   GA  + + L    +L  L L  
Sbjct: 4   RLPEEEIGDAGAKAIAEALRVNAMVTWLDLGKNQIDDAGARTIAETLKVNTTLTELFLYG 63

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
             +  AGA +IA+ L  NT++  + L+ N+I   G   + +A+K    L  +N+ +NQ G
Sbjct: 64  NQIGDAGARTIAETLKVNTSVTSLGLSENQI---GANAIAEALKVNATLTWLNLGDNQIG 120

Query: 447 EEGVEEMEKLMK 458
           + G   + + +K
Sbjct: 121 DAGARAIAEALK 132


>gi|298712172|emb|CBJ33045.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 1998

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 100/471 (21%), Positives = 193/471 (40%), Gaps = 73/471 (15%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLP---- 66
            L  +++ ++ +  VG  A++ A       L  L+L+DN+++   A  L  AL        
Sbjct: 1466 LVSLDLSRSALAGVGAVAVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGR 1525

Query: 67   ---SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK---- 119
                +  L L  C L   G + + + L  N T+E+++++ N +    G+ L ++++    
Sbjct: 1526 AGCGVRFLGLARCGLGPVGGALVCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYR 1585

Query: 120  -NKT----KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESE 174
              KT    +++++++S N  G E             +  ALV      EC+      +  
Sbjct: 1586 NGKTVRPCRMRRLDISRNPLGNEA---------GVAILGALV-----NECT------QHL 1625

Query: 175  EENDSDAEGDNSNLSHNDSNHSHNASNQSHN--NSNQSHNTSNQSHMSLKTGARLVELDL 232
            + + ++  G  + L+       H    Q  N  ++N   +  N+   +L+  A L+ LD+
Sbjct: 1626 DLSYTELRGKAAGLAIGRMLRCHTIVLQHLNVEHNNLGRHGVNEVFWALRRNASLLHLDI 1685

Query: 233  SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
            SDN  G +              F  E  KL   G         + +++     ++     
Sbjct: 1686 SDNGAGAL--------------FGTEADKLEEYG---------TTSINSALSLNQ----- 1717

Query: 293  LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
              L+    G N L  E    L A  ++ + L  V +  N +     +        ++ + 
Sbjct: 1718 -TLRFLDLGTNGLSAECGSTLTASIRRNRCLANVSLEYNLLDDQAASTFGRKLRRDRQMD 1776

Query: 353  HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG-----ASSIAKYLTDNTTL 407
            HLNLN+N + ++G + L   L+    L  L++G+  L  AG         A  L  N TL
Sbjct: 1777 HLNLNNNRVGWRGGLDLAAGLALNSHLTWLDVGNNKLGEAGMLADVGGKFAAALVKNKTL 1836

Query: 408  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +N+  N +   GG+ + +A+     L +IN+  N+  ++    +E L+K
Sbjct: 1837 TRLNMEGNTLGPSGGVAIAEALHRNNSLVEINLENNRLDQDVGFALEDLLK 1887



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 110/518 (21%), Positives = 204/518 (39%), Gaps = 71/518 (13%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGI-YHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLG 59
            + +A  K+ +TL H+++ +N +  H GI A + +   N+ L  L +  N +    A  LG
Sbjct: 1304 LFSATLKRNRTLRHLDLSRNELGTHAGI-AFATSLLVNRTLETLAIAGNGMGPNVAKNLG 1362

Query: 60   QALSKLPSLAILNLGDCLLKSAGAS---------SIAKYLTDNTTLEDVNLTCNEISVQG 110
            Q+L+K  SL  L+L D +L  A A          ++   L  N TL  +NL+ N +    
Sbjct: 1363 QSLAKNSSLKDLDLSDNVLGIATAEGGDPSDLGLALGHGLRINKTLTSINLSGNRLPTLE 1422

Query: 111  GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQD 170
               + + + +   L  + ++     +    ++ +L+     A  + L+      +     
Sbjct: 1423 MQRIAEGLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASGAGLVSLDLSRSALAGVGAV 1482

Query: 171  EESEEENDSDAEGDNSNLSHN--DSNHSHNASNQSHNNSNQSHNTSNQSHMSLK------ 222
              +          +  +LS N    N +   ++   N+            + L       
Sbjct: 1483 AVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGRAGCGVRFLGLARCGLGP 1542

Query: 223  TGARLV-----------ELDLSDNAFGPIGVEGLADLLR---------SSCCFALEELKL 262
             G  LV           ELD+SDN  GP+    LA  LR           C   +  L +
Sbjct: 1543 VGGALVCRALGGNRTVEELDMSDNGLGPVAGMALARSLRVLYRNGKTVRPC--RMRRLDI 1600

Query: 263  NNNGLG-ITGCKLLSKALHDC-------YESSKKEGSPLA-----------LKVFIAGRN 303
            + N LG   G  +L   +++C       Y   + + + LA           L+      N
Sbjct: 1601 SRNPLGNEAGVAILGALVNECTQHLDLSYTELRGKAAGLAIGRMLRCHTIVLQHLNVEHN 1660

Query: 304  RLENEGAKMLAAVFKKLKTLERVEMPQNG-----------IYHVGITALSDAFEENKNLR 352
             L   G   +    ++  +L  +++  NG           +   G T+++ A   N+ LR
Sbjct: 1661 NLGRHGVNEVFWALRRNASLLHLDISDNGAGALFGTEADKLEEYGTTSINSALSLNQTLR 1720

Query: 353  HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
             L+L  N ++ +    L  ++ +   LA ++L   LL    AS+  + L  +  ++ +NL
Sbjct: 1721 FLDLGTNGLSAECGSTLTASIRRNRCLANVSLEYNLLDDQAASTFGRKLRRDRQMDHLNL 1780

Query: 413  TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
              N +  +GGLDL   +   + L  ++V  N+ GE G+
Sbjct: 1781 NNNRVGWRGGLDLAAGLALNSHLTWLDVGNNKLGEAGM 1818



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 5/151 (3%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            L A  ++ + L +V +  N +     +        ++++ HLNLN+N + ++G + L   
Sbjct: 1737 LTASIRRNRCLANVSLEYNLLDDQAASTFGRKLRRDRQMDHLNLNNNRVGWRGGLDLAAG 1796

Query: 62   LSKLPSLAILNLGDCLLKSAG-----ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
            L+    L  L++G+  L  AG         A  L  N TL  +N+  N +   GG+ + +
Sbjct: 1797 LALNSHLTWLDVGNNKLGEAGMLADVGGKFAAALVKNKTLTRLNMEGNTLGPSGGVAIAE 1856

Query: 117  AMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            A+     L +IN+  N+  ++    +E L+K
Sbjct: 1857 ALHRNNSLVEINLENNRLDQDVGFALEDLLK 1887



 Score = 41.2 bits (95), Expect = 1.3,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 8/226 (3%)

Query: 227  LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
            L  LD+S N  GP    GLA ++  +   +L  L L++N +G     L +  +     + 
Sbjct: 1159 LKRLDISGNKIGPEAASGLAGMVTKN--RSLTYLDLSDNQMGERKFWLPTGEIMHVPSAG 1216

Query: 287  KKEGSPL----ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
               G  L     L V     N    +     A+   + ++L  + +  N +   G  AL+
Sbjct: 1217 PSLGDALRYNRTLTVLKVKGNLFGADTGHAFASGVARHRSLTWLVLSGNLLLPGGGKALA 1276

Query: 343  DAFEENK--NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
                  K   L  L+++DN +  K A      L +  +L  L+L    L +    + A  
Sbjct: 1277 LRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLKRNRTLRHLDLSRNELGTHAGIAFATS 1336

Query: 401  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
            L  N TLE + +  N +      +L +++   + LK +++S+N  G
Sbjct: 1337 LLVNRTLETLAIAGNGMGPNVAKNLGQSLAKNSSLKDLDLSDNVLG 1382


>gi|310790895|gb|EFQ26428.1| ran GTPase activating protein 1 [Glomerella graminicola M1.001]
          Length = 419

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 97/200 (48%), Gaps = 9/200 (4%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDC 282
           +L  ++L+DNAFG      +   L  +    L+ L LNNNGLG     L++ AL   H  
Sbjct: 96  KLTTINLNDNAFGINTQAPVVAFL--AAHVPLQHLYLNNNGLGPHAGILVANALSELHAK 153

Query: 283 YESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
            E ++KEG  +  L+  I GRNRLEN   +  A  F     ++ ++M QNGI   GI+ L
Sbjct: 154 KEEARKEGKEVPHLETVICGRNRLENGSMQAWAKAFSLHNKIKEIKMVQNGIRQEGISHL 213

Query: 342 -SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
            S+       LR L+L DNT T  GA  +   L     L  L L D  L + G + + K 
Sbjct: 214 ISEGLNHATELRILDLQDNTFTVSGAKAVASVLPTWTHLQELGLNDAYLTAKGTALVTKA 273

Query: 401 LTDNTT--LEDVNLTCNEIS 418
           L       LE + L  N+I+
Sbjct: 274 LAKGKQDKLEILRLAFNDIT 293



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 3/109 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F     ++ ++M QNGI   GI+ L S+      +LR L+L DNT T  GA  +  
Sbjct: 185 WAKAFSLHNKIKEIKMVQNGIRQEGISHLISEGLNHATELRILDLQDNTFTVSGAKAVAS 244

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT--LEDVNLTCNEIS 107
            L     L  L L D  L + G + + K L       LE + L  N+I+
Sbjct: 245 VLPTWTHLQELGLNDAYLTAKGTALVTKALAKGKQDKLEILRLAFNDIT 293


>gi|164562267|gb|ABY61045.1| nucleotide-binding oligomerization domain containing 3 [Sus scrofa]
          Length = 377

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 122/276 (44%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK------------------ 261
           SL     L  LDL  N+ GP G + LAD L+ +   A   L+                  
Sbjct: 1   SLLVNRSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAA 60

Query: 262 --------LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
                   L +N +G  G + ++ AL       K+  S   LK  I   N + + GAK L
Sbjct: 61  NRTLSVLHLQSNAVGPVGTQWIADAL-------KQNRS---LKKLIFSSNSIGDGGAKAL 110

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + L+ +++  N I   G+ AL  A   N+ L  LNL +N+I+  GA  L +AL
Sbjct: 111 AEALKVNQGLKSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARAL 170

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L  L+L   LL   GA +IA  + +N  L  ++L  N I       L +A++  T
Sbjct: 171 CTNSTLKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNT 230

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K+     AL L+
Sbjct: 231 SLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQ 266



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 182/425 (42%), Gaps = 63/425 (14%)

Query: 37  NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
           N+ L  L+L+ N+I  +GA  L  AL    +LA  +L    ++  GA ++A+ L  N TL
Sbjct: 5   NRSLTTLDLHSNSIGPQGAKALADALKINRTLAFRSLQSNAIRDDGARALAEALAANRTL 64

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
             ++L  N +   G   +  A+K    LK++  S N  G+ G + + +            
Sbjct: 65  SVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAE-----------A 113

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
           L+ ++G  S + Q                                     SN   +T   
Sbjct: 114 LKVNQGLKSLDLQ-------------------------------------SNSISDTGVA 136

Query: 217 SHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC-FALEELKLNNNGLGITGCKL 274
           + M+ L T   L+ L+L +N+  P G +   DL R+ C    L+ L L  N L   G + 
Sbjct: 137 ALMAALCTNQTLLSLNLRENSISPDGAQ---DLARALCTNSTLKSLDLTANLLHDQGAQA 193

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           ++ A+ +            AL       N ++   AK L    +   +L  +++ +N I 
Sbjct: 194 IAVAVRENR----------ALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIG 243

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
             G +A++ A + N  L  L L   ++   GA  LG+AL+   +L IL+L    +  AGA
Sbjct: 244 DEGASAVAIALKANTTLTALYLQVASVGALGAQALGEALAVNRTLEILDLRGNAIGVAGA 303

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            ++A  L  N++L  +NL  N + + G + +  A+     L+ I++  N  GE G   + 
Sbjct: 304 KALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHISLQGNHIGESGARMIS 363

Query: 455 KLMKS 459
           + +K+
Sbjct: 364 EAIKT 368



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/373 (22%), Positives = 149/373 (39%), Gaps = 60/373 (16%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + +  N +  VG   ++DA ++N+ L+ L  + N+I   GA  L +AL     L 
Sbjct: 62  RTLSVLHLQSNAVGPVGTQWIADALKQNRSLKKLIFSSNSIGDGGAKALAEALKVNQGLK 121

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L    +   G +++   L  N TL  +NL  N IS  G  DL +A+   + LK +++
Sbjct: 122 SLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARALCTNSTLKSLDL 181

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N   ++G + +   ++      +L L+ +  +    +   ++ + N S    D    +
Sbjct: 182 TANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENA 241

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
             D   S  A                   ++LK    L  L L   + G +G + L + L
Sbjct: 242 IGDEGASAVA-------------------IALKANTTLTALYLQVASVGALGAQALGEAL 282

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
             +    LE L L  N +G+ G K L+ AL                              
Sbjct: 283 --AVNRTLEILDLRGNAIGVAGAKALANAL------------------------------ 310

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
                   K   +L R+ + +N +   G   ++ A   N  L+H++L  N I   GA  +
Sbjct: 311 --------KVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHISLQGNHIGESGARMI 362

Query: 370 GQAL-SKLPSLAI 381
            +A+ +  PS  +
Sbjct: 363 SEAIKTNAPSCTV 375



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 78/157 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + L+ +++  N I   G+ AL  A   N+ L  LNL +N+I+  GA  L +A
Sbjct: 110 LAEALKVNQGLKSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARA 169

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N  L  ++L  N I       L +A++  
Sbjct: 170 LCTNSTLKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLN 229

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           T L  +++ EN  G+EG   +   +K+     AL L+
Sbjct: 230 TSLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQ 266



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   ++ + L  + +  N I      AL  A + N  L  L+L +N I  +GA  +  A
Sbjct: 194 IAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGDEGASAVAIA 253

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    + + GA ++ + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 254 LKANTTLTALYLQVASVGALGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 313

Query: 122 TKLKQINVSENQFGEEG 138
           + L+++N+ EN  G +G
Sbjct: 314 SSLRRLNLQENSLGMDG 330


>gi|26348215|dbj|BAC37747.1| unnamed protein product [Mus musculus]
          Length = 312

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLR------------------SSCCFA----- 256
           SL     L+ LDL  N+ GP G + LAD L+                     C A     
Sbjct: 21  SLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVS 80

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              +  L+L  N +G+ G + ++ AL       K+  S   LK  +   N + + GA  L
Sbjct: 81  NQTISMLQLQKNLIGLIGAQQMADAL-------KQNRS---LKALMFSSNTIGDRGAIAL 130

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + LE +++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QAL
Sbjct: 131 AEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQAL 190

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++   
Sbjct: 191 CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNR 250

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 251 TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 286



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 13/215 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L  S N  G  G   LA+ L+ +    LE L L +N +   G  +L +AL
Sbjct: 105 ALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQI--LENLDLQSNSISDMGVTVLMRAL 162

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
             C   S +  S L L+      N +  EGA+ L     +  TL+ +++  N ++  G  
Sbjct: 163 --C---SNQTLSSLNLR-----ENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQ 212

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++ A  EN +L HL+L  N I    A  LGQAL    +L  L+L +  +   GASS+A 
Sbjct: 213 AIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAG 272

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKT 433
            L  NTTL  + L    I  QG   L +A+  N+T
Sbjct: 273 ALKVNTTLIALYLQVASIGSQGAQALGEALTVNRT 307



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE++++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 130 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 189

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++  
Sbjct: 190 LCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLN 249

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 250 RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 286



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA + N+ L  L+L  N I 
Sbjct: 8   NQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIK 67

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G + + +AL    ++++L L   L+   GA  +A  L  N +L+ +  + N I  +G 
Sbjct: 68  DDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGA 127

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L +A+K    L+ +++  N   + GV  + + + S
Sbjct: 128 IALAEALKVNQILENLDLQSNSISDMGVTVLMRALCS 164



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 70/133 (52%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +T+  +++ +N I  +G   ++DA ++N+ L+ L  + NTI  +GAI L +AL     L 
Sbjct: 82  QTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILE 141

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L    +   G + + + L  N TL  +NL  N IS +G   L +A+     LK +++
Sbjct: 142 NLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDL 201

Query: 130 SENQFGEEGVEEM 142
           + N   + G + +
Sbjct: 202 TANLLHDRGAQAI 214



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 33/284 (11%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL  + +  N I   G+  +++A   N+ +  L L  N I   GA  +  A
Sbjct: 46  LADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADA 105

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L      +   GA ++A+ L  N  LE+++L  N IS  G   L++A+ + 
Sbjct: 106 LKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSN 165

Query: 122 TKLKQINVSENQFGEEGVEEMEK------LMKSFGMAAALVLEDDEGECSDEEQDEESEE 175
             L  +N+ EN    EG + + +       +K   + A L+   D G             
Sbjct: 166 QTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLL--HDRG------------A 211

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
           +  + A G+N +L+     H H   N     + ++   + Q + +L T      LDL +N
Sbjct: 212 QAIAVAVGENHSLT-----HLHLQWNFIQAGAARALGQALQLNRTLTT------LDLQEN 260

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           A G  G   +A  L+ +    L  L L    +G  G + L +AL
Sbjct: 261 AIGDEGASSVAGALKVNTT--LIALYLQVASIGSQGAQALGEAL 302


>gi|396471545|ref|XP_003838896.1| hypothetical protein LEMA_P025690.1 [Leptosphaeria maculans JN3]
 gi|312215465|emb|CBX95417.1| hypothetical protein LEMA_P025690.1 [Leptosphaeria maculans JN3]
          Length = 449

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 10/227 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DLSDNAFG   V  L D L  S    L  L LNNNGLG     L++ AL       +  
Sbjct: 121 VDLSDNAFGLNTVAPLVDFL--SQHTPLRYLYLNNNGLGPAAGVLVADALTALAAKKEAA 178

Query: 290 GSPLA----LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDA 344
                    L++ I GRNRLEN      A  +     ++ ++M QNGI   GI+ L ++ 
Sbjct: 179 RKAGKDVPDLELVICGRNRLENGSMAAWAKAYAANTGIKTIKMTQNGIRQEGISHLITNG 238

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
                 L  L+L DNT T  GA  L  A+     L  L +GDCLL   GA ++A  L   
Sbjct: 239 IAHLTKLDTLDLQDNTFTAMGAKALSSAVGNWTELRELGVGDCLLSGRGAVALAAALDKG 298

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEE 448
            N  ++ + L  N+I  +G   L  A  +    L+++ ++ N+F EE
Sbjct: 299 KNKKIQVLRLQFNDIDAKGLAGLATASSSSLPALRRVELNGNKFDEE 345



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 12  LEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++M QNGI   GI+ L ++      KL  L+L DNT T  GA  L  A+     L  
Sbjct: 216 IKTIKMTQNGIRQEGISHLITNGIAHLTKLDTLDLQDNTFTAMGAKALSSAVGNWTELRE 275

Query: 71  LNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
           L +GDCLL   GA ++A  L    N  ++ + L  N+I  +G   L  A  +    L+++
Sbjct: 276 LGVGDCLLSGRGAVALAAALDKGKNKKIQVLRLQFNDIDAKGLAGLATASSSSLPALRRV 335

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
            ++ N+F EE    + KL          VL+  + E  D E D+E
Sbjct: 336 ELNGNKFDEED-PSISKLRD--------VLDARKEESGDHEDDDE 371


>gi|440901436|gb|ELR52378.1| Protein NLRC3 [Bos grunniens mutus]
          Length = 1089

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 191/421 (45%), Gaps = 34/421 (8%)

Query: 40   LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
            ++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA ++A  L  N TL  +
Sbjct: 693  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 752

Query: 100  NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
            +L  N I   G   + +A+     L  +++ +N  G  G ++M   +K            
Sbjct: 753  SLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALK------------ 800

Query: 160  DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM 219
                    +     E    S++ GD    +  ++    N   +S +          ++ M
Sbjct: 801  --------QNRSLKELMFSSNSIGDGGAKALAEALMV-NQGLKSLDWQGLDCGARERALM 851

Query: 220  -SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
             +L T   L+ L+L +N+  P G + LA  LR++    L+ L L  N L   G + +++A
Sbjct: 852  GALCTNQTLLSLNLRENSISPEGAQDLARALRTNS--TLKSLDLTANLLHDQGAQAVAEA 909

Query: 279  LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
            + +      +  + L L+      N ++   AK L    +   +L  +++ +N I   G 
Sbjct: 910  VRE-----NRTLTSLHLQW-----NFIQAGAAKALGQALQLNTSLTSLDLQENAIGDEGA 959

Query: 339  TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            +A++ A + N  L  L L   +I   GA  LG+AL+   +L IL+L    ++ AGA ++A
Sbjct: 960  SAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNTIEVAGAKALA 1019

Query: 399  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              L  N++L  +NL  N + ++G + +  A+     L+ IN+  N  GE G   + + +K
Sbjct: 1020 NALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQGNHIGESGARMISEAIK 1079

Query: 459  S 459
            +
Sbjct: 1080 T 1080



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 176/429 (41%), Gaps = 76/429 (17%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +LA L
Sbjct: 693  IQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALADALKINRTLASL 752

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 753  SLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQNRSLKELMFSS 812

Query: 132  NQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGE---------CSDEEQDEESEEENDSDA 181
            N  G+ G + + E LM + G+ +      D G          C+++     +  EN    
Sbjct: 813  NSIGDGGAKALAEALMVNQGLKSLDWQGLDCGARERALMGALCTNQTLLSLNLRENSISP 872

Query: 182  EG---------DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHM----------- 219
            EG          NS L   D  +N  H+   Q+   + + + T    H+           
Sbjct: 873  EGAQDLARALRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGAAK 932

Query: 220  ----SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
                +L+    L  LDL +NA G  G   +A             LK+N            
Sbjct: 933  ALGQALQLNTSLTSLDLQENAIGDEGASAVAS-----------ALKVNT----------- 970

Query: 276  SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
               L   Y      G+P                GA+ L       +TLE +++  N I  
Sbjct: 971  --VLTALYLQVASIGAP----------------GAQALGEALAVNRTLEILDLRGNTIEV 1012

Query: 336  VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
             G  AL++A + N +LR LNL +N++  +GAI +  ALS    L  +NL    +  +GA 
Sbjct: 1013 AGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQGNHIGESGAR 1072

Query: 396  SIAKYLTDN 404
             I++ +  N
Sbjct: 1073 MISEAIKTN 1081



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 39/277 (14%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L +N +   G + +++AL
Sbjct: 714 SLLVNRSLTTLDLRSNSIGPQGAKALADALKIN--RTLASLSLQSNRIRDDGARSMAEAL 771

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                ++ +  S L L+     +N +   G + +A   K+ ++L+ +    N I   G  
Sbjct: 772 -----ATNRTLSVLHLQ-----KNSIGPVGTQQMADALKQNRSLKELMFSSNSIGDGGAK 821

Query: 340 ALSDAFEENKNLRHL---------------------------NLNDNTITYKGAIPLGQA 372
           AL++A   N+ L+ L                           NL +N+I+ +GA  L +A
Sbjct: 822 ALAEALMVNQGLKSLDWQGLDCGARERALMGALCTNQTLLSLNLRENSISPEGAQDLARA 881

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L    +L  L+L   LL   GA ++A+ + +N TL  ++L  N I       L +A++  
Sbjct: 882 LRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQLN 941

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           T L  +++ EN  G+EG   +   +K   +  AL L+
Sbjct: 942 TSLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQ 978



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 157/387 (40%), Gaps = 62/387 (16%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G  ++++A   N+ L  L+L  N+I   G   +  A
Sbjct: 739  LADALKINRTLASLSLQSNRIRDDGARSMAEALATNRTLSVLHLQKNSIGPVGTQQMADA 798

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD-------L 114
            L +  SL  L      +   GA ++A+ L  N  L+ ++          GLD       L
Sbjct: 799  LKQNRSLKELMFSSNSIGDGGAKALAEALMVNQGLKSLDWQ--------GLDCGARERAL 850

Query: 115  VKAMKNKTKLKQINVSENQFGEEGVEEMEK------LMKSFGMAAALVLEDDEGECSDEE 168
            + A+     L  +N+ EN    EG +++ +       +KS  + A L+   D+G      
Sbjct: 851  MGALCTNQTLLSLNLRENSISPEGAQDLARALRTNSTLKSLDLTANLL--HDQG------ 902

Query: 169  QDEESEEENDSDAEGDNSNLS--HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGAR 226
                   +  ++A  +N  L+  H   N     + ++   + Q  NTS            
Sbjct: 903  ------AQAVAEAVRENRTLTSLHLQWNFIQAGAAKALGQALQ-LNTS------------ 943

Query: 227  LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
            L  LDL +NA G  G   +A  L+ +    L  L L    +G  G + L +AL       
Sbjct: 944  LTSLDLQENAIGDEGASAVASALKVNT--VLTALYLQVASIGAPGAQALGEAL------- 994

Query: 287  KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
                    L++     N +E  GAK LA   K   +L R+ + +N +   G   ++ A  
Sbjct: 995  ---AVNRTLEILDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALS 1051

Query: 347  ENKNLRHLNLNDNTITYKGAIPLGQAL 373
             N  LRH+NL  N I   GA  + +A+
Sbjct: 1052 GNHGLRHINLQGNHIGESGARMISEAI 1078



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            +L  +++ +N I   G +A++ A + N  L  L L   +I   GA  LG+AL+   +L I
Sbjct: 943  SLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVASIGAPGAQALGEALAVNRTLEI 1002

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    ++ AGA ++A  L  N++L  +NL  N + ++G + +  A+     L+ IN+ 
Sbjct: 1003 LDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLRHINLQ 1062

Query: 131  ENQFGEEGVEEMEKLMKS 148
             N  GE G   + + +K+
Sbjct: 1063 GNHIGESGARMISEAIKT 1080



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL++A + N  LR LNL +N++  +GAI +  ALS    L 
Sbjct: 998  RTLEILDLRGNTIEVAGAKALANALKVNSSLRRLNLQENSLGMEGAICVATALSGNHGLR 1057

Query: 70   ILNLGDCLLKSAGASSIAKYLTDN 93
             +NL    +  +GA  I++ +  N
Sbjct: 1058 HINLQGNHIGESGARMISEAIKTN 1081


>gi|311251627|ref|XP_003124699.1| PREDICTED: protein NLRC3 [Sus scrofa]
          Length = 1066

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 192/450 (42%), Gaps = 63/450 (14%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            +  + + +N I + G  AL+ +   N+ L  L+L+ N+I  +GA  L  AL    +LA L
Sbjct: 669  IRRISLAENQISNKGAKALARSLLVNRSLTTLDLHSNSIGPQGAKALADALKINRTLAFL 728

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA ++A+ L  N TL  ++L  N +   G   +  A+K    LK++  S 
Sbjct: 729  SLQSNAIRDDGARALAEALAANRTLSVLHLQSNAVGPVGTQWIADALKQNRSLKELIFSS 788

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K                                     N  L   
Sbjct: 789  NSIGDGGAKALAEALKV------------------------------------NQGLKSL 812

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLR 250
            D              SN   +T   + M+ L T   L+ L+L +N+  P G +   DL R
Sbjct: 813  DLQ------------SNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQ---DLAR 857

Query: 251  SSCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            + C    L+ L L  N L   G + ++ A+ +            AL       N ++   
Sbjct: 858  ALCTNSTLKSLDLTANLLHDQGAQAIAVAVRENR----------ALTSLHLQWNFIQAGA 907

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            AK L    +   +L  +++ +N I   G +A++ A + N  L  L L   +I   GA  L
Sbjct: 908  AKALGQALQLNTSLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQVASIGAPGAQAL 967

Query: 370  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            G+AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+
Sbjct: 968  GEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATAL 1027

Query: 430  KNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                 L+ I++  N  GE G   + + +K+
Sbjct: 1028 SGNHGLQHISLQGNHIGESGARMISEAIKT 1057



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 122/276 (44%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA----------------------- 256
           SL     L  LDL  N+ GP G + LAD L+ +   A                       
Sbjct: 690 SLLVNRSLTTLDLHSNSIGPQGAKALADALKINRTLAFLSLQSNAIRDDGARALAEALAA 749

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              L  L L +N +G  G + ++ AL       K+  S   LK  I   N + + GAK L
Sbjct: 750 NRTLSVLHLQSNAVGPVGTQWIADAL-------KQNRS---LKELIFSSNSIGDGGAKAL 799

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + L+ +++  N I   G+ AL  A   N+ L  LNL +N+I+  GA  L +AL
Sbjct: 800 AEALKVNQGLKSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARAL 859

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L  L+L   LL   GA +IA  + +N  L  ++L  N I       L +A++  T
Sbjct: 860 CTNSTLKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNT 919

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K+     AL L+
Sbjct: 920 SLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQ 955



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 144/364 (39%), Gaps = 59/364 (16%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  + +  N +  VG   ++DA ++N+ L+ L  + N+I   GA  L +AL     L 
Sbjct: 751  RTLSVLHLQSNAVGPVGTQWIADALKQNRSLKELIFSSNSIGDGGAKALAEALKVNQGLK 810

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +   G +++   L  N TL  +NL  N IS  G  DL +A+   + LK +++
Sbjct: 811  SLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARALCTNSTLKSLDL 870

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   ++G + +   ++      +L L+ +  +    +   ++ + N S    D    +
Sbjct: 871  TANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENA 930

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
              D   S  A                   ++LK    L  L L   + G  G + L + L
Sbjct: 931  IGDEGASAVA-------------------IALKANTTLTALYLQVASIGAPGAQALGEAL 971

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
              +    LE L L  N +G+ G K L+ AL                              
Sbjct: 972  --AVNRTLEILDLRGNAIGVAGAKALANAL------------------------------ 999

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
                    K   +L R+ + +N +   G   ++ A   N  L+H++L  N I   GA  +
Sbjct: 1000 --------KVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHISLQGNHIGESGARMI 1051

Query: 370  GQAL 373
             +A+
Sbjct: 1052 SEAI 1055



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 78/157 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + L+ +++  N I   G+ AL  A   N+ L  LNL +N+I+  GA  L +A
Sbjct: 799 LAEALKVNQGLKSLDLQSNSISDTGVAALMAALCTNQTLLSLNLRENSISPDGAQDLARA 858

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N  L  ++L  N I       L +A++  
Sbjct: 859 LCTNSTLKSLDLTANLLHDQGAQAIAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLN 918

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           T L  +++ EN  G+EG   +   +K+     AL L+
Sbjct: 919 TSLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQ 955



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 72/138 (52%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            +L  +++ +N I   G +A++ A + N  L  L L   +I   GA  LG+AL+   +L I
Sbjct: 920  SLTSLDLQENAIGDEGASAVAIALKANTTLTALYLQVASIGAPGAQALGEALAVNRTLEI 979

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+     L+ I++ 
Sbjct: 980  LDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICVATALSGNHGLQHISLQ 1039

Query: 131  ENQFGEEGVEEMEKLMKS 148
             N  GE G   + + +K+
Sbjct: 1040 GNHIGESGARMISEAIKT 1057



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ + L  + +  N I      AL  A + N  L  L+L +N I  +GA  +  A
Sbjct: 883  IAVAVRENRALTSLHLQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGDEGASAVAIA 942

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + + GA ++ + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 943  LKANTTLTALYLQVASIGAPGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1002

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1003 SSLRRLNLQENSLGMDG 1019



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 68/132 (51%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +A   K+ ++L+ +    N I   G  AL++A + N+ L+ L+L  N+I+  G   L  
Sbjct: 770 WIADALKQNRSLKELIFSSNSIGDGGAKALAEALKVNQGLKSLDLQSNSISDTGVAALMA 829

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  LNL +  +   GA  +A+ L  N+TL+ ++LT N +  QG   +  A++ 
Sbjct: 830 ALCTNQTLLSLNLRENSISPDGAQDLARALCTNSTLKSLDLTANLLHDQGAQAIAVAVRE 889

Query: 121 KTKLKQINVSEN 132
              L  +++  N
Sbjct: 890 NRALTSLHLQWN 901


>gi|67968113|dbj|BAE00537.1| unnamed protein product [Macaca fascicularis]
          Length = 266

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 50/66 (75%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +  GA+LVELDLSDNAFGP GV+G   LL+SS CF L ELKLNN G+GI G K+L+ AL 
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167

Query: 281 DCYESS 286
           +C+  S
Sbjct: 168 ECHRKS 173


>gi|124486873|ref|NP_001074749.1| protein NLRC3 [Mus musculus]
 gi|182887927|gb|AAI60196.1| NLR family, CARD domain containing 3 [synthetic construct]
          Length = 1102

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLR------------------SSCCFA----- 256
           SL     L+ LDL  N+ GP G + LAD L+                     C A     
Sbjct: 726 SLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVS 785

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              +  L+L  N +G+ G + ++ AL       K+  S   LK  +   N + + GA  L
Sbjct: 786 NQTISMLQLQKNLIGLIGAQQMADAL-------KQNRS---LKALMFSSNTIGDRGAIAL 835

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + LE +++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QAL
Sbjct: 836 AEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQAL 895

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++   
Sbjct: 896 CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNR 955

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 956 TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 991



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 39/370 (10%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  N I   G + + +AL    +++
Sbjct: 731  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 790

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L L   L+   GA  +A  L  N +L+ +  + N I  +G + L +A+K    L+ +++
Sbjct: 791  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 850

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS--- 186
              N   + GV     LM++               CS++     +  EN    EG  +   
Sbjct: 851  QSNSISDMGVT---VLMRAL--------------CSNQTLSSLNLRENSISPEGAQALTQ 893

Query: 187  NLSHNDS-NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
             L  N++  H    +N  H+   Q+   +   + SL        L L  N         L
Sbjct: 894  ALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSL------THLHLQWNFIQAGAARAL 947

Query: 246  ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
               L+ +    L  L L  N +G  G   ++ AL       K   + +AL + +A    +
Sbjct: 948  GQALQLN--RTLTTLDLQENAIGDEGASSVAGAL-------KVNTTLIALYLQVAS---I 995

Query: 306  ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
             ++GA+ L       +TLE +++  N +   G  AL++A + N +LR LNL +N++   G
Sbjct: 996  GSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDG 1055

Query: 366  AIPLGQALSK 375
            AI +  ALS+
Sbjct: 1056 AIFVASALSE 1065



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE++++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 835 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 894

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++  
Sbjct: 895 LCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLN 954

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 955 RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 991



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            +LK    L  L  S N  G  G   LA+ L+ +    LE L L +N +   G  +L +AL
Sbjct: 810  ALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQI--LENLDLQSNSISDMGVTVLMRAL 867

Query: 280  HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  S +  S L L+      N +  EGA+ L     +  TL+ +++  N ++  G  
Sbjct: 868  -----CSNQTLSSLNLR-----ENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQ 917

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            A++ A  EN +L HL+L  N I    A  LGQAL    +L  L+L +  +   GASS+A 
Sbjct: 918  AIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAG 977

Query: 400  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
             L  NTTL  + L    I  QG   L +A+     L+ +++  N
Sbjct: 978  ALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGN 1021



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 158/372 (42%), Gaps = 67/372 (18%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +T+  +++ +N I  +G   ++DA ++N+ L+ L  + NTI  +GAI L +AL     L 
Sbjct: 787  QTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILE 846

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +   G + + + L  N TL  +NL  N IS +G   L +A+     LK +++
Sbjct: 847  NLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDL 906

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   + G + +                                    + A G+N +L+
Sbjct: 907  TANLLHDRGAQAI------------------------------------AVAVGENHSLT 930

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                 H H   N     + ++   + Q + +L T      LDL +NA G  G   +A  L
Sbjct: 931  -----HLHLQWNFIQAGAARALGQALQLNRTLTT------LDLQENAIGDEGASSVAGAL 979

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            + +    L  L L    +G  G + L +AL     +  +      L++     N +   G
Sbjct: 980  KVNT--TLIALYLQVASIGSQGAQALGEAL-----TVNR-----TLEILDLRGNDVGAAG 1027

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            AK LA   K   +L R+ + +N +   G   ++ A  EN  L H+NL  N        P+
Sbjct: 1028 AKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGN--------PI 1079

Query: 370  GQALSKLPSLAI 381
            G++ +++ S AI
Sbjct: 1080 GESAARMISEAI 1091



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA + N+ L  L+L  N I 
Sbjct: 713 NQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIK 772

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G + + +AL    ++++L L   L+   GA  +A  L  N +L+ +  + N I  +G 
Sbjct: 773 DDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGA 832

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L +A+K    L+ +++  N   + GV  + + + S
Sbjct: 833 IALAEALKVNQILENLDLQSNSISDMGVTVLMRALCS 869



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  +++ +N I   G ++++ A + N  L  L L   +I  +GA  LG+AL+   +L 
Sbjct: 955  RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLE 1014

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    + +AGA ++A  L  N++L  +NL  N + + G + +  A+     L  IN+
Sbjct: 1015 ILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINL 1074

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  GE     + + +K+
Sbjct: 1075 QGNPIGESAARMISEAIKT 1093


>gi|365758909|gb|EHN00730.1| Rna1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 406

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 6/180 (3%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           RL  ++LSDNAFG   +E L + +  +    ++ L L+NNG+G    + + KAL    ++
Sbjct: 109 RLEIVNLSDNAFGLRTIELLENYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQN 166

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSD 343
            K    P  L+ FI GRNRLEN  A  LA   K   + L+ V++ QNGI   G+ T +  
Sbjct: 167 KKAASKPF-LETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHY 225

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
             +  K L   +L DNT T   +  L +AL     SL  LNL DCLLK+ G+  + K  T
Sbjct: 226 GLQYLKALEIFDLQDNTFTKHASFILAKALPTWKDSLYELNLNDCLLKTTGSDEVFKVFT 285



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L   +L DNT T   +  L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKALEIFDLQDNTFTKHASFILAKALPTWKDSLY 263

Query: 70  ILNLGDCLLKSAGASSIAKYLT 91
            LNL DCLLK+ G+  + K  T
Sbjct: 264 ELNLNDCLLKTTGSDEVFKVFT 285


>gi|158563868|sp|Q5DU56.2|NLRC3_MOUSE RecName: Full=Protein NLRC3
          Length = 1064

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLR------------------SSCCFA----- 256
           SL     L+ LDL  N+ GP G + LAD L+                     C A     
Sbjct: 688 SLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVS 747

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              +  L+L  N +G+ G + ++ AL       K+  S   LK  +   N + + GA  L
Sbjct: 748 NQTISMLQLQKNLIGLIGAQQMADAL-------KQNRS---LKALMFSSNTIGDRGAIAL 797

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + LE +++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QAL
Sbjct: 798 AEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQAL 857

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++   
Sbjct: 858 CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNR 917

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 918 TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 953



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 39/370 (10%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  N I   G + + +AL    +++
Sbjct: 693  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 752

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L L   L+   GA  +A  L  N +L+ +  + N I  +G + L +A+K    L+ +++
Sbjct: 753  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 812

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS--- 186
              N   + GV     LM++               CS++     +  EN    EG  +   
Sbjct: 813  QSNSISDMGVT---VLMRAL--------------CSNQTLSSLNLRENSISPEGAQALTQ 855

Query: 187  NLSHNDS-NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
             L  N++  H    +N  H+   Q+   +   + SL        L L  N         L
Sbjct: 856  ALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSL------THLHLQWNFIQAGAARAL 909

Query: 246  ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
               L+ +    L  L L  N +G  G   ++ AL       K   + +AL + +A    +
Sbjct: 910  GQALQLN--RTLTTLDLQENAIGDEGASSVAGAL-------KVNTTLIALYLQVAS---I 957

Query: 306  ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
             ++GA+ L       +TLE +++  N +   G  AL++A + N +LR LNL +N++   G
Sbjct: 958  GSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDG 1017

Query: 366  AIPLGQALSK 375
            AI +  ALS+
Sbjct: 1018 AIFVASALSE 1027



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE++++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 797 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 856

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++  
Sbjct: 857 LCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLN 916

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 917 RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 953



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L  S N  G  G   LA+ L+ +    LE L L +N +   G  +L +AL
Sbjct: 772 ALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQI--LENLDLQSNSISDMGVTVLMRAL 829

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 S +  S L L+      N +  EGA+ L     +  TL+ +++  N ++  G  
Sbjct: 830 -----CSNQTLSSLNLR-----ENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQ 879

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++ A  EN +L HL+L  N I    A  LGQAL    +L  L+L +  +   GASS+A 
Sbjct: 880 AIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAG 939

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
            L  NTTL  + L    I  QG   L +A+     L+ +++  N
Sbjct: 940 ALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGN 983



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 160/377 (42%), Gaps = 49/377 (12%)

Query: 82   GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
            GA ++A+ L  N +L  ++L  N I   G   L  A+K    L  +++  N   ++GV  
Sbjct: 681  GAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMC 740

Query: 142  MEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN--------DSDAEGDNSNLSHNDS 193
            + + + S    + L L+ +       +Q  ++ ++N         S+  GD   ++  ++
Sbjct: 741  VAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEA 800

Query: 194  NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSC 253
                                       LK    L  LDL  N+   +GV     L+R+ C
Sbjct: 801  ---------------------------LKVNQILENLDLQSNSISDMGV---TVLMRALC 830

Query: 254  C-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
                L  L L  N +   G + L++AL  C  ++ K     A        N L + GA+ 
Sbjct: 831  SNQTLSSLNLRENSISPEGAQALTQAL--CRNNTLKHLDLTA--------NLLHDRGAQA 880

Query: 313  LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
            +A    +  +L  + +  N I      AL  A + N+ L  L+L +N I  +GA  +  A
Sbjct: 881  IAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGA 940

Query: 373  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
            L    +L  L L    + S GA ++ + LT N TLE ++L  N++   G   L  A+K  
Sbjct: 941  LKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLN 1000

Query: 433  TKLKQINVSENQFGEEG 449
            + L+++N+ EN  G +G
Sbjct: 1001 SSLRRLNLQENSLGMDG 1017



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 158/372 (42%), Gaps = 67/372 (18%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +T+  +++ +N I  +G   ++DA ++N+ L+ L  + NTI  +GAI L +AL     L 
Sbjct: 749  QTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILE 808

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +   G + + + L  N TL  +NL  N IS +G   L +A+     LK +++
Sbjct: 809  NLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDL 868

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   + G + +                                    + A G+N +L+
Sbjct: 869  TANLLHDRGAQAI------------------------------------AVAVGENHSLT 892

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                 H H   N     + ++   + Q + +L T      LDL +NA G  G   +A  L
Sbjct: 893  -----HLHLQWNFIQAGAARALGQALQLNRTLTT------LDLQENAIGDEGASSVAGAL 941

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            + +    L  L L    +G  G + L +AL     +  +      L++     N +   G
Sbjct: 942  KVNT--TLIALYLQVASIGSQGAQALGEAL-----TVNR-----TLEILDLRGNDVGAAG 989

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            AK LA   K   +L R+ + +N +   G   ++ A  EN  L H+NL  N        P+
Sbjct: 990  AKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGN--------PI 1041

Query: 370  GQALSKLPSLAI 381
            G++ +++ S AI
Sbjct: 1042 GESAARMISEAI 1053



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA + N+ L  L+L  N I 
Sbjct: 675 NQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIK 734

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G + + +AL    ++++L L   L+   GA  +A  L  N +L+ +  + N I  +G 
Sbjct: 735 DDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGA 794

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L +A+K    L+ +++  N   + GV  + + + S
Sbjct: 795 IALAEALKVNQILENLDLQSNSISDMGVTVLMRALCS 831



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  +++ +N I   G ++++ A + N  L  L L   +I  +GA  LG+AL+   +L 
Sbjct: 917  RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLE 976

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    + +AGA ++A  L  N++L  +NL  N + + G + +  A+     L  IN+
Sbjct: 977  ILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINL 1036

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  GE     + + +K+
Sbjct: 1037 QGNPIGESAARMISEAIKT 1055


>gi|118918429|ref|NP_849172.2| protein NLRC3 [Homo sapiens]
 gi|158563940|sp|Q7RTR2.2|NLRC3_HUMAN RecName: Full=Protein NLRC3; AltName: Full=CARD15-like protein;
            AltName: Full=Caterpiller protein 16.2; Short=CLR16.2;
            AltName: Full=Nucleotide-binding oligomerization domain
            protein 3
 gi|54633547|gb|AAT48367.1| caterpiller 16.2 [Homo sapiens]
 gi|119605756|gb|EAW85350.1| NOD3 protein, isoform CRA_c [Homo sapiens]
 gi|227809550|gb|ACP40993.1| NLRC3 [Homo sapiens]
          Length = 1065

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G +           A A  L+ ++G    E  D +S   +D+        L  N
Sbjct: 788  NSIGDGGAK-----------ALAEALKVNQGL---ESLDLQSNSISDAGVAALMGALCTN 833

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L L +N+  P G + +A  L +
Sbjct: 834  QT---------------------------------LLSLSLRENSISPEGAQAIAHALCA 860

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +      +  + L L+      N ++   A+
Sbjct: 861  NS--TLKNLDLTANLLHDQGARAIAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQ 908

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+
Sbjct: 909  ALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGE 968

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 969  ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG 1028

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  G+ G   + + +K+
Sbjct: 1029 NHRLQHINLQGNHIGDSGARMISEAIKT 1056



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 174/421 (41%), Gaps = 83/421 (19%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 694  RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++  + N I   G   L +A+K    L+ +++
Sbjct: 754  MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 813

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 814  QSNSISDAGV---AALMGAL--------------CTNQTLLSLSLRENSISPEGAQAIAH 856

Query: 184  ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KT 223
                NS L + D  +N  H+   ++   + + + T    H+                 + 
Sbjct: 857  ALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQL 916

Query: 224  GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
               L  LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++L +AL    
Sbjct: 917  NRSLTSLDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQVLGEAL---- 970

Query: 284  ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                               NR                 TLE +++  N I   G  AL++
Sbjct: 971  -----------------AVNR-----------------TLEILDLRGNAIGVAGAKALAN 996

Query: 344  AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  
Sbjct: 997  ALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1056

Query: 404  N 404
            N
Sbjct: 1057 N 1057



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +   G + +++AL
Sbjct: 689 SLLVNRSLTSLDLRGNSIGPQGAKALADALKIN--RTLTSLSLQGNTVRDDGARSMAEAL 746

Query: 280 HDCYESS-----KKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                 S     K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 747 ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQ 806

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  
Sbjct: 807 GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKN 866

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 867 LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 926

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G++G   + + +K      AL L+
Sbjct: 927 ENAIGDDGACAVARALKVNTALTALYLQ 954



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 647 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 706

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 707 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 766

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++  S N  G+ G + + + +K
Sbjct: 767 AQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALK 803



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 798 LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 857

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 858 LCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 917

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G++G   + + +K      AL L+
Sbjct: 918 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 954



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 882  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 941

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 942  LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1001

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1002 SSLRRLNLQENSLGMDG 1018



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ +    N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 770 MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 829

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 830 LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVREN 889

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 890 RTLTSLHLQWN 900


>gi|60360292|dbj|BAD90390.1| mFLJ00348 protein [Mus musculus]
          Length = 1089

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 36/276 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLR------------------SSCCFA----- 256
           SL     L+ LDL  N+ GP G + LAD L+                     C A     
Sbjct: 713 SLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVS 772

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              +  L+L  N +G+ G + ++ AL       K+  S   LK  +   N + + GA  L
Sbjct: 773 NQTISMLQLQKNLIGLIGAQQMADAL-------KQNRS---LKALMFSSNTIGDRGAIAL 822

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  + LE +++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QAL
Sbjct: 823 AEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQAL 882

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++   
Sbjct: 883 CRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNR 942

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 943 TLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 978



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 39/370 (10%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  N I   G + + +AL    +++
Sbjct: 718  RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 777

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L L   L+   GA  +A  L  N +L+ +  + N I  +G + L +A+K    L+ +++
Sbjct: 778  MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 837

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS--- 186
              N   + GV     LM++               CS++     +  EN    EG  +   
Sbjct: 838  QSNSISDMGVT---VLMRAL--------------CSNQTLSSLNLRENSISPEGAQALTQ 880

Query: 187  NLSHNDS-NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
             L  N++  H    +N  H+   Q+   +   + SL        L L  N         L
Sbjct: 881  ALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSL------THLHLQWNFIQAGAARAL 934

Query: 246  ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
               L+ +    L  L L  N +G  G   ++ AL       K   + +AL + +A    +
Sbjct: 935  GQALQLN--RTLTTLDLQENAIGDEGASSVAGAL-------KVNTTLIALYLQVAS---I 982

Query: 306  ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
             ++GA+ L       +TLE +++  N +   G  AL++A + N +LR LNL +N++   G
Sbjct: 983  GSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDG 1042

Query: 366  AIPLGQALSK 375
            AI +  ALS+
Sbjct: 1043 AIFVASALSE 1052



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE++++  N I  +G+T L  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 822 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 881

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++  
Sbjct: 882 LCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLN 941

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 942 RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 978



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            +LK    L  L  S N  G  G   LA+ L+ +    LE L L +N +   G  +L +AL
Sbjct: 797  ALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQI--LENLDLQSNSISDMGVTVLMRAL 854

Query: 280  HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  S +  S L L+      N +  EGA+ L     +  TL+ +++  N ++  G  
Sbjct: 855  -----CSNQTLSSLNLR-----ENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQ 904

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            A++ A  EN +L HL+L  N I    A  LGQAL    +L  L+L +  +   GASS+A 
Sbjct: 905  AIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAG 964

Query: 400  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
             L  NTTL  + L    I  QG   L +A+     L+ +++  N
Sbjct: 965  ALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGN 1008



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 158/372 (42%), Gaps = 67/372 (18%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +T+  +++ +N I  +G   ++DA ++N+ L+ L  + NTI  +GAI L +AL     L 
Sbjct: 774  QTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILE 833

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +   G + + + L  N TL  +NL  N IS +G   L +A+     LK +++
Sbjct: 834  NLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDL 893

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   + G + +                                    + A G+N +L+
Sbjct: 894  TANLLHDRGAQAI------------------------------------AVAVGENHSLT 917

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                 H H   N     + ++   + Q + +L T      LDL +NA G  G   +A  L
Sbjct: 918  -----HLHLQWNFIQAGAARALGQALQLNRTLTT------LDLQENAIGDEGASSVAGAL 966

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            + +    L  L L    +G  G + L +AL     +  +      L++     N +   G
Sbjct: 967  KVNT--TLIALYLQVASIGSQGAQALGEAL-----TVNR-----TLEILDLRGNDVGAAG 1014

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            AK LA   K   +L R+ + +N +   G   ++ A  EN  L H+NL  N        P+
Sbjct: 1015 AKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINLQGN--------PI 1066

Query: 370  GQALSKLPSLAI 381
            G++ +++ S AI
Sbjct: 1067 GESAARMISEAI 1078



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA + N+ L  L+L  N I 
Sbjct: 700 NQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIK 759

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G + + +AL    ++++L L   L+   GA  +A  L  N +L+ +  + N I  +G 
Sbjct: 760 DDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGA 819

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L +A+K    L+ +++  N   + GV  + + + S
Sbjct: 820 IALAEALKVNQILENLDLQSNSISDMGVTVLMRALCS 856



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  +++ +N I   G ++++ A + N  L  L L   +I  +GA  LG+AL+   +L 
Sbjct: 942  RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLE 1001

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    + +AGA ++A  L  N++L  +NL  N + + G + +  A+     L  IN+
Sbjct: 1002 ILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINL 1061

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  GE     + + +K+
Sbjct: 1062 QGNPIGESAARMISEAIKT 1080


>gi|66815309|ref|XP_641671.1| hypothetical protein DDB_G0279513 [Dictyostelium discoideum AX4]
 gi|60469707|gb|EAL67695.1| hypothetical protein DDB_G0279513 [Dictyostelium discoideum AX4]
          Length = 617

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 198/446 (44%), Gaps = 65/446 (14%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K+K+L  +++  N   +  I  L++A + NK L +LNL +N +  KG   +  A+ K  S
Sbjct: 101 KIKSLTTIDLRNNSSTNYVIDRLAEALKSNKTLTYLNLYNNRLMQKGGTSIANAMKKNQS 160

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           +  L+LG  LL + G ++IA  L  N TL  ++L                          
Sbjct: 161 ITHLDLGLNLLGANGGNAIADALKVNNTLVHLDL-------------------------- 194

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE--GECSDEEQDEESEEENDSDAEGDN 185
             S NQ G  G   + + +K       L+L  ++   ECS    D      N    E   
Sbjct: 195 --SSNQLGLRGAGPVVEALKINKSIKYLILNSNQLRDECSLPLAD--ILRSNIGFIE--- 247

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
             L+ ND             N   S      + M LK+   L +L+   N  G  G   +
Sbjct: 248 --LALND-------------NEIGSKGGIALAKM-LKSSKVLTKLEFGKNELGDDGGLAM 291

Query: 246 ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
           AD+L+++    ++ ++LN N LG+   K LS       ES K   + + L +     N  
Sbjct: 292 ADVLKNNK--NIKVVRLNWNKLGVKAIKALS-------ESFKTNSTIIQLDL---SFNNF 339

Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
            +EG   L+  FK+ K++  +++ +     VG  AL+D+   N  ++ L+L +  IT +G
Sbjct: 340 GDEGLVCLSESFKQNKSILSLDLSRVASGLVGHKALADSLRVNNTIQTLDLTNCKITNEG 399

Query: 366 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 425
            + L ++L    S++ L L +        S +AK L  N+T+  ++L  N++++ G  DL
Sbjct: 400 GVELAKSLVDNKSISTLILNNNTFSKDTVSELAKTLESNSTITSLSLVHNQLTIDGVEDL 459

Query: 426 VKAMKNKT--KLKQINVSENQFGEEG 449
            K++   T   L+ ++++ N  G +G
Sbjct: 460 FKSLSTSTNKSLQTLDLTNNLLGSDG 485



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 193/450 (42%), Gaps = 71/450 (15%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   KK +++ H+++  N +   G  A++DA + N  L HL+L+ N +  +GA P+ +A
Sbjct: 151 IANAMKKNQSITHLDLGLNLLGANGGNAIADALKVNNTLVHLDLSSNQLGLRGAGPVVEA 210

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    S+  L L    L+   +  +A  L  N    ++ L  NEI  +GG+ L K +K+ 
Sbjct: 211 LKINKSIKYLILNSNQLRDECSLPLADILRSNIGFIELALNDNEIGSKGGIALAKMLKSS 270

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L ++   +N+ G++G   M  ++K+      + L  ++      +   ES + N +  
Sbjct: 271 KVLTKLEFGKNELGDDGGLAMADVLKNNKNIKVVRLNWNKLGVKAIKALSESFKTNSTII 330

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM----SLKTGARLVELDLSDNAF 237
           + D   LS N                    N  ++  +    S K    ++ LDLS  A 
Sbjct: 331 QLD---LSFN--------------------NFGDEGLVCLSESFKQNKSILSLDLSRVAS 367

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
           G +G + LAD LR +              L +T CK                        
Sbjct: 368 GLVGHKALADSLRVNNTIQ---------TLDLTNCK------------------------ 394

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
                  + NEG   LA      K++  + +  N      ++ L+   E N  +  L+L 
Sbjct: 395 -------ITNEGGVELAKSLVDNKSISTLILNNNTFSKDTVSELAKTLESNSTITSLSLV 447

Query: 358 DNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
            N +T  G   L ++LS     SL  L+L + LL S G + IA++LT  + L ++ LT N
Sbjct: 448 HNQLTIDGVEDLFKSLSTSTNKSLQTLDLTNNLLGSDGGNIIAQHLTK-SNLSELILTNN 506

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           ++S QG   ++  +  ++ L+ +++S N  
Sbjct: 507 QLSSQGASSILNVLP-QSNLQTLDISNNSI 535



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 40/277 (14%)

Query: 220 SLKTGARLVELDLSDNAFGPIG----VEGL------------------------ADLLRS 251
           +LK    LV LDLS N  G  G    VE L                        AD+LRS
Sbjct: 182 ALKVNNTLVHLDLSSNQLGLRGAGPVVEALKINKSIKYLILNSNQLRDECSLPLADILRS 241

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           +  F   EL LN+N +G  G   L+K L      +K E           G+N L ++G  
Sbjct: 242 NIGFI--ELALNDNEIGSKGGIALAKMLKSSKVLTKLE----------FGKNELGDDGGL 289

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            +A V K  K ++ V +  N +    I ALS++F+ N  +  L+L+ N    +G + L +
Sbjct: 290 AMADVLKNNKNIKVVRLNWNKLGVKAIKALSESFKTNSTIIQLDLSFNNFGDEGLVCLSE 349

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
           +  +  S+  L+L        G  ++A  L  N T++ ++LT  +I+ +GG++L K++ +
Sbjct: 350 SFKQNKSILSLDLSRVASGLVGHKALADSLRVNNTIQTLDLTNCKITNEGGVELAKSLVD 409

Query: 432 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
              +  + ++ N F ++ V E+ K ++S     +L L
Sbjct: 410 NKSISTLILNNNTFSKDTVSELAKTLESNSTITSLSL 446



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 85/154 (55%)

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
           K+K+L  +++  N   +  I  L++A + NK L +LNL +N +  KG   +  A+ K  S
Sbjct: 101 KIKSLTTIDLRNNSSTNYVIDRLAEALKSNKTLTYLNLYNNRLMQKGGTSIANAMKKNQS 160

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           +  L+LG  LL + G ++IA  L  N TL  ++L+ N++ ++G   +V+A+K    +K +
Sbjct: 161 ITHLDLGLNLLGANGGNAIADALKVNNTLVHLDLSSNQLGLRGAGPVVEALKINKSIKYL 220

Query: 439 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            ++ NQ  +E    +  +++S      L L D+E
Sbjct: 221 ILNSNQLRDECSLPLADILRSNIGFIELALNDNE 254



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 81/156 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NRL  +G   +A   KK +++  +++  N +   G  A++DA + N  L HL+L+ N + 
Sbjct: 141 NRLMQKGGTSIANAMKKNQSITHLDLGLNLLGANGGNAIADALKVNNTLVHLDLSSNQLG 200

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA P+ +AL    S+  L L    L+   +  +A  L  N    ++ L  NEI  +GG
Sbjct: 201 LRGAGPVVEALKINKSIKYLILNSNQLRDECSLPLADILRSNIGFIELALNDNEIGSKGG 260

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L K +K+   L ++   +N+ G++G   M  ++K
Sbjct: 261 IALAKMLKSSKVLTKLEFGKNELGDDGGLAMADVLK 296



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 12/233 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  +DL +N+     ++ LA+ L+S+    L  L L NN       +L+ K       + 
Sbjct: 105 LTTIDLRNNSSTNYVIDRLAEALKSNK--TLTYLNLYNN-------RLMQKGGTSIANAM 155

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           KK  S   L +   G N L   G   +A   K   TL  +++  N +   G   + +A +
Sbjct: 156 KKNQSITHLDL---GLNLLGANGGNAIADALKVNNTLVHLDLSSNQLGLRGAGPVVEALK 212

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            NK++++L LN N +  + ++PL   L        L L D  + S G  ++AK L  +  
Sbjct: 213 INKSIKYLILNSNQLRDECSLPLADILRSNIGFIELALNDNEIGSKGGIALAKMLKSSKV 272

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L  +    NE+   GGL +   +KN   +K + ++ N+ G + ++ + +  K+
Sbjct: 273 LTKLEFGKNELGDDGGLAMADVLKNNKNIKVVRLNWNKLGVKAIKALSESFKT 325


>gi|453089424|gb|EMF17464.1| ran GTPase activating protein 1 [Mycosphaerella populorum SO2202]
          Length = 421

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 107/229 (46%), Gaps = 12/229 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE---SS 286
           ++L+DNAFG   VE L   L  S    L+ L LNNNGLG     L+++AL    E   ++
Sbjct: 98  INLNDNAFGLNTVEPLRPFL--SKHTPLQHLYLNNNGLGPAAGTLVAEALAQLAENKAAA 155

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDA 344
           +KEG  +  L+  + GRNRLE          +     ++ V+M QNGI   GI  L    
Sbjct: 156 RKEGKDVPHLETVVCGRNRLETGSMAAWVKAYTANNNVKTVKMVQNGIRQEGIAQLIQHG 215

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD- 403
             +   L  L+L DNT T   A  L   +     +  L +GDCLL   G   +   L   
Sbjct: 216 LSQCTALDTLDLQDNTFTALAAKTLSSVVPTWTEIRELAVGDCLLSGRGGRMLGDALAKA 275

Query: 404 -NTTLEDVNLTCNEISVQG---GLDLVKAMKNKTKLKQINVSENQFGEE 448
            N  LE + L  NEI  +G     D   A     +L+++ ++ N+F EE
Sbjct: 276 GNKKLEILRLQYNEIDTKGLKAISDAASAASALPRLRRVELNGNKFAEE 324



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 75/175 (42%), Gaps = 18/175 (10%)

Query: 15  VEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           V+M QNGI   GI  L      +   L  L+L DNT T   A  L   +     +  L +
Sbjct: 196 VKMVQNGIRQEGIAQLIQHGLSQCTALDTLDLQDNTFTALAAKTLSSVVPTWTEIRELAV 255

Query: 74  GDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQG---GLDLVKAMKNKTKLKQIN 128
           GDCLL   G   +   L    N  LE + L  NEI  +G     D   A     +L+++ 
Sbjct: 256 GDCLLSGRGGRMLGDALAKAGNKKLEILRLQYNEIDTKGLKAISDAASAASALPRLRRVE 315

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           ++ N+F EE    +E L          VL   + E +DE  D    +E+D DA G
Sbjct: 316 LNGNKFAEED-PSIESLRD--------VLAKRKEEKADEYHD---VDEDDEDAWG 358


>gi|30348948|tpg|DAA01245.1| TPA_inf: NOD3 [Homo sapiens]
          Length = 1112

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 715  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 774

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 775  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSS 834

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G +           A A  L+ ++G    E  D +S   +D+        L  N
Sbjct: 835  NSIGDGGAK-----------ALAEALKVNQGL---ESLDLQSNSISDAGVAALMGALCTN 880

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L L +N+  P G + +A  L +
Sbjct: 881  QT---------------------------------LLSLSLRENSISPEGAQAIAHALCA 907

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +      +  + L L+      N ++   A+
Sbjct: 908  NS--TLKNLDLTANLLHDQGARAIAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQ 955

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+
Sbjct: 956  ALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGE 1015

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 1016 ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG 1075

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  G+ G   + + +K+
Sbjct: 1076 NHRLQHINLQGNHIGDSGARMISEAIKT 1103



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 174/421 (41%), Gaps = 83/421 (19%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 741  RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 800

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++  + N I   G   L +A+K    L+ +++
Sbjct: 801  MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 860

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 861  QSNSISDAGV---AALMGAL--------------CTNQTLLSLSLRENSISPEGAQAIAH 903

Query: 184  ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KT 223
                NS L + D  +N  H+   ++   + + + T    H+                 + 
Sbjct: 904  ALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQL 963

Query: 224  GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
               L  LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++L +AL    
Sbjct: 964  NRSLTSLDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQVLGEAL---- 1017

Query: 284  ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                               NR                 TLE +++  N I   G  AL++
Sbjct: 1018 -----------------AVNR-----------------TLEILDLRGNAIGVAGAKALAN 1043

Query: 344  AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  
Sbjct: 1044 ALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1103

Query: 404  N 404
            N
Sbjct: 1104 N 1104



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +   G + +++AL
Sbjct: 736  SLLVNRSLTSLDLRGNSIGPQGAKALADALKIN--RTLTSLSLQGNTVRDDGARSMAEAL 793

Query: 280  HDCYESS-----KKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                  S     K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 794  ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQ 853

Query: 322  TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
             LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  
Sbjct: 854  GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKN 913

Query: 382  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
            L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 914  LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 973

Query: 442  ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            EN  G++G   + + +K      AL L+
Sbjct: 974  ENAIGDDGACAVARALKVNTALTALYLQ 1001



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 694 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 753

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 754 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 813

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++  S N  G+ G + + + +K
Sbjct: 814 AQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALK 850



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 845  LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 904

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 905  LCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 964

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
              L  +++ EN  G++G   + + +K      AL L+
Sbjct: 965  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 1001



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 929  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 988

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 989  LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1048

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1049 SSLRRLNLQENSLGMDG 1065



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ +    N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 817 MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 876

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 877 LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVREN 936

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 937 RTLTSLHLQWN 947


>gi|154339185|ref|XP_001562284.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062867|emb|CAM39314.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 417

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 14/250 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L++   L  LDLS N  G  G E +A  LR+    AL+ L+L+ N LG TG  ++  A+ 
Sbjct: 134 LESNTYLSSLDLSVNELGASGAEYIAGALRNPAS-ALQVLQLHGNYLGATGVTMICDAVK 192

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                + KE     LK    G N   +E A  +AA+      LE +++  N +   G+  
Sbjct: 193 -----TNKE-----LKRLTLGNNHATDEAASAIAAMLNANYILEELDIRLNTLTTRGVKT 242

Query: 341 LSD-AFEENKNLRHLNLNDNTITYKGAIPLGQALS--KLPSLAILNLGDCLLKSAGASSI 397
           ++     +N  LR L+L+ N + + GA  L   L+  +  +L  L+L  C L S+G   I
Sbjct: 243 IAQQGLAKNTTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQI 302

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           A+ L+ + +L+++NL+ N +  +  + L +++ +   +  +++S N+ GEEG  ++   +
Sbjct: 303 ARLLSMSISLKEINLSDNALDDEAAVRLAQSIADSISISVVDLSCNEIGEEGASQLIGAV 362

Query: 458 KSFGMAAALV 467
                 AALV
Sbjct: 363 LRNAQLAALV 372



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 3/158 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +AA+      LE +++  N +   G+  ++     +N  LR L+L+ N + + GA  L  
Sbjct: 215 IAAMLNANYILEELDIRLNTLTTRGVKTIAQQGLAKNTTLRMLSLSGNEVGHAGANELTH 274

Query: 61  ALS--KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
            L+  +  +L  L+L  C L S+G   IA+ L+ + +L+++NL+ N +  +  + L +++
Sbjct: 275 VLASHQRSALGHLDLSSCGLTSSGGVQIARLLSMSISLKEINLSDNALDDEAAVRLAQSI 334

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
            +   +  +++S N+ GEEG  ++   +      AALV
Sbjct: 335 ADSISISVVDLSCNEIGEEGASQLIGAVLRNAQLAALV 372



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 23/263 (8%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL------L 275
           KT A +  +D  DN  GP G   +A  L SS    + ++ +  N +G  GC        L
Sbjct: 24  KTDAPIRAVDFMDNQLGPTGALRIASCLESS---PVTKVLICYNDIGKEGCDGLAEVVNL 80

Query: 276 SKALH------------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
           S +LH            D +   +      +L       NRL  EGA ++A V +    L
Sbjct: 81  SNSLHVLDIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGPEGAALVAKVLESNTYL 140

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKN-LRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
             +++  N +   G   ++ A     + L+ L L+ N +   G   +  A+     L  L
Sbjct: 141 SSLDLSVNELGASGAEYIAGALRNPASALQVLQLHGNYLGATGVTMICDAVKTNKELKRL 200

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAMKNKTKLKQINVS 441
            LG+       AS+IA  L  N  LE++++  N ++ +G   +  + +   T L+ +++S
Sbjct: 201 TLGNNHATDEAASAIAAMLNANYILEELDIRLNTLTTRGVKTIAQQGLAKNTTLRMLSLS 260

Query: 442 ENQFGEEGVEEMEKLMKSFGMAA 464
            N+ G  G  E+  ++ S   +A
Sbjct: 261 GNEVGHAGANELTHVLASHQRSA 283



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 2/144 (1%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK--LRHLNLNDNTITYKGAIPLGQALS 63
             K  TL  + +  N + H G   L+     +++  L HL+L+   +T  G + + + LS
Sbjct: 248 LAKNTTLRMLSLSGNEVGHAGANELTHVLASHQRSALGHLDLSSCGLTSSGGVQIARLLS 307

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
              SL  +NL D  L    A  +A+ + D+ ++  V+L+CNEI  +G   L+ A+    +
Sbjct: 308 MSISLKEINLSDNALDDEAAVRLAQSIADSISISVVDLSCNEIGEEGASQLIGAVLRNAQ 367

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L  +  + N       ++++ +++
Sbjct: 368 LAALVTNGNNISRVAQKKIDNVLE 391



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 4/165 (2%)

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           +K  +P+    F+   N+L   GA  +A+  +    + +V +  N I   G   L++   
Sbjct: 23  RKTDAPIRAVDFM--DNQLGPTGALRIASCLES-SPVTKVLICYNDIGKEGCDGLAEVVN 79

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            + +L  L++  N ++   A  L +++S   SL  L L    L   GA+ +AK L  NT 
Sbjct: 80  LSNSLHVLDIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLGPEGAALVAKVLESNTY 139

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGV 450
           L  ++L+ NE+   G   +  A++N  + L+ + +  N  G  GV
Sbjct: 140 LSSLDLSVNELGASGAEYIAGALRNPASALQVLQLHGNYLGATGV 184



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 140/348 (40%), Gaps = 37/348 (10%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G   L++    +  L  L++  N ++   A  L +++S   SL  L L    L 
Sbjct: 64  NDIGKEGCDGLAEVVNLSNSLHVLDIRGNRLSASDAHRLLRSVSLSTSLTRLGLASNRLG 123

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEG 138
             GA+ +AK L  NT L  ++L+ NE+   G   +  A++N  + L+ + +  N  G  G
Sbjct: 124 PEGAALVAKVLESNTYLSSLDLSVNELGASGAEYIAGALRNPASALQVLQLHGNYLGATG 183

Query: 139 VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHN 198
           V  +   +K+      L L ++            ++E   + A   N+N    + +   N
Sbjct: 184 VTMICDAVKTNKELKRLTLGNNHA----------TDEAASAIAAMLNANYILEELDIRLN 233

Query: 199 ASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALE 258
                   + +   T  Q  ++  T  R+  L LS N  G  G   L  +L S    AL 
Sbjct: 234 TL------TTRGVKTIAQQGLAKNTTLRM--LSLSGNEVGHAGANELTHVLASHQRSALG 285

Query: 259 ELKLNNNGL----GITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA 314
            L L++ GL    G+   +LLS +              ++LK      N L++E A  LA
Sbjct: 286 HLDLSSCGLTSSGGVQIARLLSMS--------------ISLKEINLSDNALDDEAAVRLA 331

Query: 315 AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
                  ++  V++  N I   G + L  A   N  L  L  N N I+
Sbjct: 332 QSIADSISISVVDLSCNEIGEEGASQLIGAVLRNAQLAALVTNGNNIS 379


>gi|119605757|gb|EAW85351.1| NOD3 protein, isoform CRA_d [Homo sapiens]
          Length = 1112

 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 59/448 (13%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 715  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 774

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 775  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSS 834

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G +           A A  L+ ++G    E  D +S   +D+        L  N
Sbjct: 835  NSIGDGGAK-----------ALAEALKVNQGL---ESLDLQSNSISDAGVAALMGALCTN 880

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             +                                 L+ L L +N+  P G + +A  L +
Sbjct: 881  QT---------------------------------LLSLSLRENSISPEGAQAIAHALCA 907

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +    L+ L L  N L   G + ++ A+ +      +  + L L+      N ++   A+
Sbjct: 908  NS--TLKNLDLTANLLHDQGARAIAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQ 955

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L    +  ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+
Sbjct: 956  ALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGE 1015

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+  
Sbjct: 1016 ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG 1075

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
              +L+ IN+  N  G+ G   + + +K+
Sbjct: 1076 NHRLQHINLQGNHIGDSGARMISEAIKT 1103



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 174/421 (41%), Gaps = 83/421 (19%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 741  RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 800

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++  + N I   G   L +A+K    L+ +++
Sbjct: 801  MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 860

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 861  QSNSISDAGV---AALMGAL--------------CTNQTLLSLSLRENSISPEGAQAIAH 903

Query: 184  ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KT 223
                NS L + D  +N  H+   ++   + + + T    H+                 + 
Sbjct: 904  ALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQL 963

Query: 224  GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
               L  LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++L +AL    
Sbjct: 964  NRSLTSLDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQVLGEAL---- 1017

Query: 284  ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                               NR                 TLE +++  N I   G  AL++
Sbjct: 1018 -----------------AVNR-----------------TLEILDLRGNAIGVAGAKALAN 1043

Query: 344  AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  
Sbjct: 1044 ALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1103

Query: 404  N 404
            N
Sbjct: 1104 N 1104



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +   G + +++AL
Sbjct: 736  SLLVNRSLTSLDLRGNSIGPQGAKALADALKIN--RTLTSLSLQGNTVRDDGARSMAEAL 793

Query: 280  HDCYESS-----KKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                  S     K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 794  ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQ 853

Query: 322  TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
             LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  
Sbjct: 854  GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKN 913

Query: 382  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
            L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 914  LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 973

Query: 442  ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            EN  G++G   + + +K      AL L+
Sbjct: 974  ENAIGDDGACAVARALKVNTALTALYLQ 1001



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 694 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 753

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 754 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 813

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++  S N  G+ G + + + +K
Sbjct: 814 AQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALK 850



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 845  LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 904

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 905  LCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 964

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
              L  +++ EN  G++G   + + +K      AL L+
Sbjct: 965  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 1001



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 929  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 988

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 989  LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1048

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1049 SSLRRLNLQENSLGMDG 1065



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ +    N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 817 MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 876

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 877 LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVREN 936

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 937 RTLTSLHLQWN 947


>gi|320168401|gb|EFW45300.1| hypothetical protein CAOG_03306 [Capsaspora owczarzaki ATCC 30864]
          Length = 440

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 13/236 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L    L  N  G  G + +A+ L+      L ELKL  N +G  G + +++AL
Sbjct: 23  ALKVNTTLTWFYLDSNQIGDAGAQAIAEALKDK---PLAELKLGGNRIGDAGARAIAEAL 79

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L L     G NR+ + GA  +A   K  KTL ++E   N I  VG  
Sbjct: 80  -----KVNKTLTQLEL-----GSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPIGDVGAQ 129

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A   NK L  L+L  + I   GA  + +AL    +L  L+LGD  +   GA ++A+
Sbjct: 130 AVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVGAQAVAE 189

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            L  N TL  ++L+CN I   G + + +A+     L ++ ++ N     G E + +
Sbjct: 190 ALKVNKTLTRLSLSCNRIGDAGAVAIAEALTVNKTLTELYLTYNCISVLGSEAIYR 245



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 15/219 (6%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
           L  N  G  G   +A+ L+ +    L    L++N +G  G + +++AL D          
Sbjct: 7   LGSNRIGDGGAWAIAEALKVNT--TLTWFYLDSNQIGDAGAQAIAEALKD---------K 55

Query: 292 PLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
           PLA LK+   G NR+ + GA+ +A   K  KTL ++E+  N I   G  A+++A + NK 
Sbjct: 56  PLAELKL---GGNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIAEALKVNKT 112

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           L  L   DN I   GA  + +AL+   +L  L+L    +  AGA +IA+ L  N TL  +
Sbjct: 113 LTQLEFGDNPIGDVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQL 172

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +L  N+I   G   + +A+K    L ++++S N+ G+ G
Sbjct: 173 DLGDNQIGDVGAQAVAEALKVNKTLTRLSLSCNRIGDAG 211



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 12/237 (5%)

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
           +SNQ  +   Q+         L EL L  N  G  G   +A+ L+ +    L +L+L +N
Sbjct: 36  DSNQIGDAGAQAIAEALKDKPLAELKLGGNRIGDAGARAIAEALKVN--KTLTQLELGSN 93

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
            +G  G   +++AL        K    L    F  G N + + GA+ +A      KTL R
Sbjct: 94  RIGDGGAWAIAEAL--------KVNKTLTQLEF--GDNPIGDVGAQAVAEALTVNKTLTR 143

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + +  + I   G  A+++A + NK L  L+L DN I   GA  + +AL    +L  L+L 
Sbjct: 144 LSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVGAQAVAEALKVNKTLTRLSLS 203

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
              +  AGA +IA+ LT N TL ++ LT N ISV G   + +A   K +L+  + S 
Sbjct: 204 CNRIGDAGAVAIAEALTVNKTLTELYLTYNCISVLGSEAIYRACTGKRRLQAFHGSR 260



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 1/164 (0%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L  F    N++ + GA+ +A   K  K L  +++  N I   G  A+++A + NK L  L
Sbjct: 30  LTWFYLDSNQIGDAGAQAIAEALKD-KPLAELKLGGNRIGDAGARAIAEALKVNKTLTQL 88

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            L  N I   GA  + +AL    +L  L  GD  +   GA ++A+ LT N TL  ++L  
Sbjct: 89  ELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPIGDVGAQAVAEALTVNKTLTRLSLWS 148

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           ++I   G   + +A+K    L Q+++ +NQ G+ G + + + +K
Sbjct: 149 SQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVGAQAVAEALK 192



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 73/140 (52%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K K L  +++  N I   G  A+++A + NK L  L L  N I   GA  + +AL    +
Sbjct: 53  KDKPLAELKLGGNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIAEALKVNKT 112

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L  L  GD  +   GA ++A+ LT N TL  ++L  ++I   G   + +A+K    L Q+
Sbjct: 113 LTQLEFGDNPIGDVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQL 172

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           ++ +NQ G+ G + + + +K
Sbjct: 173 DLGDNQIGDVGAQAVAEALK 192



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 72/137 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  +E+  N I   G  A+++A + NK L  L   DN I   GA  + +A
Sbjct: 75  IAEALKVNKTLTQLELGSNRIGDGGAWAIAEALKVNKTLTQLEFGDNPIGDVGAQAVAEA 134

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+   +L  L+L    +  AGA +IA+ L  N TL  ++L  N+I   G   + +A+K  
Sbjct: 135 LTVNKTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVGAQAVAEALKVN 194

Query: 122 TKLKQINVSENQFGEEG 138
             L ++++S N+ G+ G
Sbjct: 195 KTLTRLSLSCNRIGDAG 211



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 72/143 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  +E   N I  VG  A+++A   NK L  L+L  + I   GA  + +A
Sbjct: 103 IAEALKVNKTLTQLEFGDNPIGDVGAQAVAEALTVNKTLTRLSLWSSQIGDAGARAIAEA 162

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+LGD  +   GA ++A+ L  N TL  ++L+CN I   G + + +A+   
Sbjct: 163 LKVNKTLTQLDLGDNQIGDVGAQAVAEALKVNKTLTRLSLSCNRIGDAGAVAIAEALTVN 222

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
             L ++ ++ N     G E + +
Sbjct: 223 KTLTELYLTYNCISVLGSEAIYR 245



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 65/122 (53%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KTL  + +  + I   G  A+++A + NK L  L+L DN I   GA  + +AL    +L 
Sbjct: 139 KTLTRLSLWSSQIGDAGARAIAEALKVNKTLTQLDLGDNQIGDVGAQAVAEALKVNKTLT 198

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L    +  AGA +IA+ LT N TL ++ LT N ISV G   + +A   K +L+  + 
Sbjct: 199 RLSLSCNRIGDAGAVAIAEALTVNKTLTELYLTYNCISVLGSEAIYRACTGKRRLQAFHG 258

Query: 130 SE 131
           S 
Sbjct: 259 SR 260



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 34/268 (12%)

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
            L  N I   G   + +A+K  T L    +  NQ G+ G + + + +K   +A       
Sbjct: 6   RLGSNRIGDGGAWAIAEALKVNTTLTWFYLDSNQIGDAGAQAIAEALKDKPLA------- 58

Query: 160 DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM 219
                         E +   +  GD    +  ++   +    Q    SN+  +    +  
Sbjct: 59  --------------ELKLGGNRIGDAGARAIAEALKVNKTLTQLELGSNRIGDGGAWAIA 104

Query: 220 -SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            +LK    L +L+  DN  G +G + +A+ L  +    L  L L ++ +G  G + +++A
Sbjct: 105 EALKVNKTLTQLEFGDNPIGDVGAQAVAEAL--TVNKTLTRLSLWSSQIGDAGARAIAEA 162

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L        K  + L L     G N++ + GA+ +A   K  KTL R+ +  N I   G 
Sbjct: 163 L-----KVNKTLTQLDL-----GDNQIGDVGAQAVAEALKVNKTLTRLSLSCNRIGDAGA 212

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGA 366
            A+++A   NK L  L L  N I+  G+
Sbjct: 213 VAIAEALTVNKTLTELYLTYNCISVLGS 240


>gi|320165432|gb|EFW42331.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 446

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 12/253 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    +  L L     G +G + +A+ L+ +    L+EL L+ N +G  G + +++AL
Sbjct: 37  ALKVNKTVTWLILWATQIGHVGAQAIAEALKVN--RTLKELHLHTNQIGDAGAQAIAEAL 94

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                         AL+    G N++   GA+ +A   K   TL  +++ ++ I   G+ 
Sbjct: 95  E----------VNTALRRLDLGCNQIGKAGARAIAEALKANTTLTSLDLWESQIGDAGVQ 144

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+ +A +EN  +  L L+D+ I   GA  + +AL    +L+ L L  C +  AGA +IA+
Sbjct: 145 AIFEALKENATVTKLGLSDSQIGDAGAHAIAEALKVNKTLSCLKLCACQIGDAGAHAIAE 204

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  N T+  + L  N+I   G   + +A++  T L Q+ +  NQ G+ G + + + +K 
Sbjct: 205 ALRVNKTVTTLYLHENQIGDAGARAIAEALRVNTTLTQLYLHMNQIGDVGAQAIAEALKL 264

Query: 460 FGMAAALVLEDDE 472
             M   L L  ++
Sbjct: 265 NTMVNELFLSGNQ 277



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 41/353 (11%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + NK +  L L    I + GA  + +AL    +L  L+L    +  AGA +IA+
Sbjct: 33  AIAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNRTLKELHLHTNQIGDAGAQAIAE 92

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L  NT L  ++L CN+I   G   + +A+K  T L  +++ E+Q G+ GV+ + + +K 
Sbjct: 93  ALEVNTALRRLDLGCNQIGKAGARAIAEALKANTTLTSLDLWESQIGDAGVQAIFEALKE 152

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
                 L L D         Q  ++     ++A   N  LS             +H  + 
Sbjct: 153 NATVTKLGLSD--------SQIGDAGAHAIAEALKVNKTLSCLKLCACQIGDAGAHAIAE 204

Query: 209 QSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
                      +L+    +  L L +N  G  G   +A+ LR +    L +L L+ N +G
Sbjct: 205 -----------ALRVNKTVTTLYLHENQIGDAGARAIAEALRVNT--TLTQLYLHMNQIG 251

Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
             G + +++AL         + + +  ++F++G N++ + G   +A   K   T+  +++
Sbjct: 252 DVGAQAIAEAL---------KLNTMVNELFLSG-NQIGDIGVHAIAEALKVNTTVTELDL 301

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI-PLGQALSKLPSLA 380
             N I +VG+ A  +  + N+ L +  ++       G I PL  A S LP LA
Sbjct: 302 RYNCIGNVGLQAFDEMCQVNRTLSNFWID-------GQINPL--AFSLLPRLA 345



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 88/161 (54%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
            I G ++  ++ AK +A   K  KT+  + +    I HVG  A+++A + N+ L+ L+L+
Sbjct: 19  LILGDHQTGDDEAKAIAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNRTLKELHLH 78

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N I   GA  + +AL    +L  L+LG   +  AGA +IA+ L  NTTL  ++L  ++I
Sbjct: 79  TNQIGDAGAQAIAEALEVNTALRRLDLGCNQIGKAGARAIAEALKANTTLTSLDLWESQI 138

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              G   + +A+K    + ++ +S++Q G+ G   + + +K
Sbjct: 139 GDAGVQAIFEALKENATVTKLGLSDSQIGDAGAHAIAEALK 179



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 11/281 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KT+  + +    I HVG  A+++A + N+ L+ L+L+ N I   GA  + +A
Sbjct: 34  IAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNRTLKELHLHTNQIGDAGAQAIAEA 93

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+LG   +  AGA +IA+ L  NTTL  ++L  ++I   G   + +A+K  
Sbjct: 94  LEVNTALRRLDLGCNQIGKAGARAIAEALKANTTLTSLDLWESQIGDAGVQAIFEALKEN 153

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS-- 179
             + ++ +S++Q G+ G   + + +K     + L L   +   +      E+   N +  
Sbjct: 154 ATVTKLGLSDSQIGDAGAHAIAEALKVNKTLSCLKLCACQIGDAGAHAIAEALRVNKTVT 213

Query: 180 ------DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDL 232
                 +  GD    +  ++   +    Q + + NQ  +   Q+   +LK    + EL L
Sbjct: 214 TLYLHENQIGDAGARAIAEALRVNTTLTQLYLHMNQIGDVGAQAIAEALKLNTMVNELFL 273

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCK 273
           S N  G IGV  +A+ L+ +    + EL L  N +G  G +
Sbjct: 274 SGNQIGDIGVHAIAEALKVNT--TVTELDLRYNCIGNVGLQ 312



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 74/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  +++    I   G  A+++A   NK +  L L++N I   GA  + +A
Sbjct: 174 IAEALKVNKTLSCLKLCACQIGDAGAHAIAEALRVNKTVTTLYLHENQIGDAGARAIAEA 233

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    +   GA +IA+ L  NT + ++ L+ N+I   G   + +A+K  
Sbjct: 234 LRVNTTLTQLYLHMNQIGDVGAQAIAEALKLNTMVNELFLSGNQIGDIGVHAIAEALKVN 293

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T + ++++  N  G  G++  +++ +
Sbjct: 294 TTVTELDLRYNCIGNVGLQAFDEMCQ 319



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 50/91 (54%)

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +AL    ++  L L    +   GA +IA+ L  N TL++++L  N+I   G   + +A
Sbjct: 34  IAEALKVNKTVTWLILWATQIGHVGAQAIAEALKVNRTLKELHLHTNQIGDAGAQAIAEA 93

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           ++  T L+++++  NQ G+ G   + + +K+
Sbjct: 94  LEVNTALRRLDLGCNQIGKAGARAIAEALKA 124


>gi|403349288|gb|EJY74083.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
 gi|403355535|gb|EJY77346.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
 gi|403358592|gb|EJY78952.1| Leucine rich repeat containing proteins-like protein [Oxytricha
           trifallax]
          Length = 999

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 193/445 (43%), Gaps = 51/445 (11%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  A+++A +    L+ + + +N I  +GAI L + L +  +L  L + +  + 
Sbjct: 190 NRIGEEGAVAIAEAMQMMDSLKKICIENNGIKDRGAIALSRVLMENDTLLSLYIENNQIS 249

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           S GA ++AK L +   L  +N+  N I  +G   + + +     L+ I +++    +  +
Sbjct: 250 SQGAIALAKMLRNKMKLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSL 309

Query: 140 EEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNA 199
               + +K+      ++L+ ++      +   E  +EN++     N +LSH         
Sbjct: 310 AVFARSLKNKRFLTKILLDSNKIGIEGAKILAEGLKENETLT---NLHLSH--------- 357

Query: 200 SNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC----- 254
                              + L+ GA  +   L++     +       +L   C      
Sbjct: 358 ------------------CLILEEGAVALATALTNKRNLLVLDLNNNKILAGGCIAICKN 399

Query: 255 ----FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
                 L EL ++NN +G  G K L+K L      +KK  + + L +     N +  EGA
Sbjct: 400 IQHHTTLRELYMSNNYIGPDGAKQLAKVL-----VNKKYITEIWLSM-----NGIFAEGA 449

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
             L    K  K LE + + +N I   GI AL +    +K ++ LNL  N I  +GA  + 
Sbjct: 450 IALGEALKDKKYLEVLVLKKNDINIQGIRALKEVLNLSKTIKELNLASNAIGDEGASIVC 509

Query: 371 QAL--SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           +AL   +   L  L L D  + + GA  +A+ ++  TTL ++ L  NEI   G   LVKA
Sbjct: 510 EALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCTTLTELYLANNEIDNDGAKALVKA 569

Query: 429 MKNKTKLKQINVSENQFGEEGVEEM 453
           +K +T  K I++  N F  E + E+
Sbjct: 570 IKGRTDFKNIDLDNNLFSGEAITEL 594



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 199/485 (41%), Gaps = 37/485 (7%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
            K  K L  V++ +N I    I  + DA   + +L  L L++N IT  GA  L + L   
Sbjct: 92  IKMKKELRTVDLGENRITDASIGFIGDALRTHVRLHMLFLDNNKITDAGAEGLAECLKNK 151

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
             L ILN+ +  +   GA  +A  L  N  L  +    N I  +G + + +AM+    LK
Sbjct: 152 QDLRILNIDNNQIGPEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEAMQMMDSLK 211

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE--------------GECSDEEQDE 171
           +I +  N   + G   + +++       +L +E+++               +    + + 
Sbjct: 212 KICIENNGIKDRGAIALSRVLMENDTLLSLYIENNQISSQGAIALAKMLRNKMKLSKLNM 271

Query: 172 ESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELD 231
                 D   +  +  +S N++      ++     +  + N+      SLK    L ++ 
Sbjct: 272 NHNPIGDEGMQAISEGISQNETLRVITIAD-----AGITKNSLAVFARSLKNKRFLTKIL 326

Query: 232 LSDNAFGPIGVEGLADLLRS---------SCCFALEE------LKLNNNGLGITGCKLLS 276
           L  N  G  G + LA+ L+          S C  LEE        L N    +      +
Sbjct: 327 LDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNKRNLLVLDLNNN 386

Query: 277 KALHD-CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           K L   C    K       L+      N +  +GAK LA V    K +  + +  NGI+ 
Sbjct: 387 KILAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVNKKYITEIWLSMNGIFA 446

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
            G  AL +A ++ K L  L L  N I  +G   L + L+   ++  LNL    +   GAS
Sbjct: 447 EGAIALGEALKDKKYLEVLVLKKNDINIQGIRALKEVLNLSKTIKELNLASNAIGDEGAS 506

Query: 396 SIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            + + L +  N  L  + L+ N+I+ QG + + + +   T L ++ ++ N+   +G + +
Sbjct: 507 IVCEALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCTTLTELYLANNEIDNDGAKAL 566

Query: 454 EKLMK 458
            K +K
Sbjct: 567 VKAIK 571



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 213/471 (45%), Gaps = 41/471 (8%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + +   GI    +   + + +  + L  + L+ N I  +GA  L + L +  +L  
Sbjct: 293 TLRVITIADAGITKNSLAVFARSLKNKRFLTKILLDSNKIGIEGAKILAEGLKENETLTN 352

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L  CL+   GA ++A  LT+   L  ++L  N+I   G + + K +++ T L+++ +S
Sbjct: 353 LHLSHCLILEEGAVALATALTNKRNLLVLDLNNNKILAGGCIAICKNIQHHTTLRELYMS 412

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDD----EGECSDEE--QDEESEE-----ENDS 179
            N  G +G +++ K++ +      + L  +    EG  +  E  +D++  E     +ND 
Sbjct: 413 NNYIGPDGAKQLAKVLVNKKYITEIWLSMNGIFAEGAIALGEALKDKKYLEVLVLKKNDI 472

Query: 180 DAEGDNS-----NLSHN--DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDL 232
           + +G  +     NLS    + N + NA        ++  +   ++ ++ K   +L  L L
Sbjct: 473 NIQGIRALKEVLNLSKTIKELNLASNAI------GDEGASIVCEALIN-KQNQQLNYLGL 525

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL------------H 280
           SDN     G   +A L+  S C  L EL L NN +   G K L KA+            +
Sbjct: 526 SDNKITTQGAIKVAQLI--SKCTTLTELYLANNEIDNDGAKALVKAIKGRTDFKNIDLDN 583

Query: 281 DCY--ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           + +  E+  +  + L L      ++ L +     LA   K  K+L ++ M  N +    +
Sbjct: 584 NLFSGEAITELFTILPLNKLNLIKSILTDAQVTPLARQMKINKSLSQIYMSHNQLSDNSV 643

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             L+DA  +N  L  L +  N ++    I L QAL   P L  L L  C L       +A
Sbjct: 644 ALLADAIVDNSVLTELFITHNDLSGTSGILLIQALKNKPGLKSLALNSCKLNQGLLRELA 703

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           + L DN +L+++ L  N+I       + + ++NK KL  + +S NQ  E+G
Sbjct: 704 ESLKDNESLKELYLYSNQIGPNQAQFVSQIIQNKRKLTSLGLSNNQIAEDG 754



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 197/472 (41%), Gaps = 59/472 (12%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           + +++ +    LE +    N      I AL    +  K+LR ++L +N IT      +G 
Sbjct: 59  IFSSILRSYDKLEGINFRCNNFNERVIEALCQGIKMKKELRTVDLGENRITDASIGFIGD 118

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL     L +L L +  +  AGA  +A+ L +   L  +N+  N+I  +G   L   +K+
Sbjct: 119 ALRTHVRLHMLFLDNNKITDAGAEGLAECLKNKQDLRILNIDNNQIGPEGARKLAMQLKS 178

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
              L ++    N+ GEEG   + + M+       + +E++  +              D  
Sbjct: 179 NYGLSKLYCDSNRIGEEGAVAIAEAMQMMDSLKKICIENNGIK--------------DRG 224

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
           A   +  L  ND+                                 L+ L + +N     
Sbjct: 225 AIALSRVLMENDT---------------------------------LLSLYIENNQISSQ 251

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G   LA +LR+     L +L +N+N +G  G + +S+ +      S+ E     L+V   
Sbjct: 252 GAIALAKMLRNK--MKLSKLNMNHNPIGDEGMQAISEGI------SQNE----TLRVITI 299

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
               +      + A   K  + L ++ +  N I   G   L++  +EN+ L +L+L+   
Sbjct: 300 ADAGITKNSLAVFARSLKNKRFLTKILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCL 359

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I  +GA+ L  AL+   +L +L+L +  + + G  +I K +  +TTL ++ ++ N I   
Sbjct: 360 ILEEGAVALATALTNKRNLLVLDLNNNKILAGGCIAICKNIQHHTTLRELYMSNNYIGPD 419

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           G   L K + NK  + +I +S N    EG   + + +K       LVL+ ++
Sbjct: 420 GAKQLAKVLVNKKYITEIWLSMNGIFAEGAIALGEALKDKKYLEVLVLKKND 471



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 173/411 (42%), Gaps = 31/411 (7%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L  LNL  + +T     PL + +    SL+ + +    L     + +A  + DN+ L ++
Sbjct: 600 LNKLNLIKSILTDAQVTPLARQMKINKSLSQIYMSHNQLSDNSVALLADAIVDNSVLTEL 659

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
            +T N++S   G+ L++A+KNK  LK + ++  +  +  + E+ + +K            
Sbjct: 660 FITHNDLSGTSGILLIQALKNKPGLKSLALNSCKLNQGLLRELAESLK------------ 707

Query: 160 DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM 219
                 D E  +E    ++         +S    N     S    NN          +  
Sbjct: 708 ------DNESLKELYLYSNQIGPNQAQFVSQIIQNKRKLTSLGLSNNQIAEDGAIFLAQN 761

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            L+    L +L L  N  G  G+  +++ L ++    L+EL L NN L   G   L + L
Sbjct: 762 GLQNKENLTKLSLEGNFIGGTGLIAVSEALMANT--ELQELFLYNNHLNDVGMDKLGQML 819

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +           + L       N++ +EGA  +    KKLK  E++ + QN I      
Sbjct: 820 QN----------KINLYALGMEFNKIGSEGAAYIFNNIKKLKNFEKLYLNQNDIKSEVGD 869

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+ D     +NL+ + L++N +  +G   +  AL    SL I  L +    +  A  + +
Sbjct: 870 AMIDCLSVIENLKEIRLSNNKLGDEGGKAIALALKVNKSLRICQLSNNKFSAEAAKEMVE 929

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            +  N+ L D++L+ N I ++   +L  A K ++ L+ +N+  N    E +
Sbjct: 930 VIKQNSQLRDLDLSSNLIIMEELQELANAFK-ESSLECLNLRNNLISAEEI 979



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 179/410 (43%), Gaps = 60/410 (14%)

Query: 77  LLKSAGASSI-AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
           ++ + G SSI +  L     LE +N  CN  + +    L + +K K +L+ +++ EN+  
Sbjct: 50  IIDTEGMSSIFSSILRSYDKLEGINFRCNNFNERVIEALCQGIKMKKELRTVDLGENRIT 109

Query: 136 EEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNH 195
           +  +  +   +++      L L+++              +  D+ AEG    L +     
Sbjct: 110 DASIGFIGDALRTHVRLHMLFLDNN--------------KITDAGAEGLAECLKNKQDLR 155

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
             N      +N+      + +  M LK+   L +L    N  G  G   +A+ ++     
Sbjct: 156 ILNI-----DNNQIGPEGARKLAMQLKSNYGLSKLYCDSNRIGEEGAVAIAEAMQ--MMD 208

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           +L+++ + NNG+   G   LS+ L +         +   L ++I   N++ ++GA  LA 
Sbjct: 209 SLKKICIENNGIKDRGAIALSRVLME---------NDTLLSLYIEN-NQISSQGAIALAK 258

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND----------------- 358
           + +    L ++ M  N I   G+ A+S+   +N+ LR + + D                 
Sbjct: 259 MLRNKMKLSKLNMNHNPIGDEGMQAISEGISQNETLRVITIADAGITKNSLAVFARSLKN 318

Query: 359 -----------NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
                      N I  +GA  L + L +  +L  L+L  CL+   GA ++A  LT+   L
Sbjct: 319 KRFLTKILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALATALTNKRNL 378

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
             ++L  N+I   G + + K +++ T L+++ +S N  G +G +++ K++
Sbjct: 379 LVLDLNNNKILAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVL 428



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 212/489 (43%), Gaps = 55/489 (11%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAF--EENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           KT++ + +  N I   G + + +A   ++N++L +L L+DN IT +GAI + Q +SK  +
Sbjct: 488 KTIKELNLASNAIGDEGASIVCEALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCTT 547

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L  L L +  + + GA ++ K +   T  ++++L  N  S +   +L   +     L ++
Sbjct: 548 LTELYLANNEIDNDGAKALVKAIKGRTDFKNIDLDNNLFSGEAITELFTILP----LNKL 603

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
           N+ ++   +  V  + + MK     + + +  +        Q  ++     +DA  DNS 
Sbjct: 604 NLIKSILTDAQVTPLARQMKINKSLSQIYMSHN--------QLSDNSVALLADAIVDNSV 655

Query: 188 LS-----HND-SNHSHNASNQSHNNSNQSHNTS------NQSHM-----SLKTGARLVEL 230
           L+     HND S  S     Q+  N     + +      NQ  +     SLK    L EL
Sbjct: 656 LTELFITHNDLSGTSGILLIQALKNKPGLKSLALNSCKLNQGLLRELAESLKDNESLKEL 715

Query: 231 DLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK-- 288
            L  N  GP   + ++ ++++     L  L L+NN +   G   L++      E+  K  
Sbjct: 716 YLYSNQIGPNQAQFVSQIIQNK--RKLTSLGLSNNQIAEDGAIFLAQNGLQNKENLTKLS 773

Query: 289 -EGSPLA----------------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
            EG+ +                 L+      N L + G   L  + +    L  + M  N
Sbjct: 774 LEGNFIGGTGLIAVSEALMANTELQELFLYNNHLNDVGMDKLGQMLQNKINLYALGMEFN 833

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
            I   G   + +  ++ KN   L LN N I  +    +   LS + +L  + L +  L  
Sbjct: 834 KIGSEGAAYIFNNIKKLKNFEKLYLNQNDIKSEVGDAMIDCLSVIENLKEIRLSNNKLGD 893

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            G  +IA  L  N +L    L+ N+ S +   ++V+ +K  ++L+ +++S N      +E
Sbjct: 894 EGGKAIALALKVNKSLRICQLSNNKFSAEAAKEMVEVIKQNSQLRDLDLSSNLI---IME 950

Query: 452 EMEKLMKSF 460
           E+++L  +F
Sbjct: 951 ELQELANAF 959



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 106/504 (21%), Positives = 202/504 (40%), Gaps = 95/504 (18%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           + A   K  + L  + +  N I   G   L++  +EN+ L +L+L+   I  +GA+ L  
Sbjct: 311 VFARSLKNKRFLTKILLDSNKIGIEGAKILAEGLKENETLTNLHLSHCLILEEGAVALAT 370

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL+   +L +L+L +  + + G  +I K +  +TTL ++ ++ N I   G   L K + N
Sbjct: 371 ALTNKRNLLVLDLNNNKILAGGCIAICKNIQHHTTLRELYMSNNYIGPDGAKQLAKVLVN 430

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           K  + +I +S N    EG   + + +K       LVL+                 +ND +
Sbjct: 431 KKYITEIWLSMNGIFAEGAIALGEALKDKKYLEVLVLK-----------------KNDIN 473

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
            +G  +                                  L     + EL+L+ NA G  
Sbjct: 474 IQGIRA------------------------------LKEVLNLSKTIKELNLASNAIGDE 503

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G   + + L +     L  L L++N +   G   +++ +  C   ++         +++A
Sbjct: 504 GASIVCEALINKQNQQLNYLGLSDNKITTQGAIKVAQLISKCTTLTE---------LYLA 554

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
             N ++N+GAK L    K     + +++  N      IT L      NK    LNL  + 
Sbjct: 555 N-NEIDNDGAKALVKAIKGRTDFKNIDLDNNLFSGEAITELFTILPLNK----LNLIKSI 609

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           +T     PL + +    SL+ + +    L     + +A  + DN+ L ++ +T N++S  
Sbjct: 610 LTDAQVTPLARQMKINKSLSQIYMSHNQLSDNSVALLADAIVDNSVLTELFITHNDLSGT 669

Query: 421 GGLDLVKAMKNKT----------------------------KLKQINVSENQFGEEGVEE 452
            G+ L++A+KNK                              LK++ +  NQ G    + 
Sbjct: 670 SGILLIQALKNKPGLKSLALNSCKLNQGLLRELAESLKDNESLKELYLYSNQIGPNQAQF 729

Query: 453 MEKLMK------SFGMAAALVLED 470
           + ++++      S G++   + ED
Sbjct: 730 VSQIIQNKRKLTSLGLSNNQIAED 753



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 65/137 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  K+L  + M  N +    +  L+DA  +N  L  L +  N ++    I L QA
Sbjct: 618 LARQMKINKSLSQIYMSHNQLSDNSVALLADAIVDNSVLTELFITHNDLSGTSGILLIQA 677

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   P L  L L  C L       +A+ L DN +L+++ L  N+I       + + ++NK
Sbjct: 678 LKNKPGLKSLALNSCKLNQGLLRELAESLKDNESLKELYLYSNQIGPNQAQFVSQIIQNK 737

Query: 122 TKLKQINVSENQFGEEG 138
            KL  + +S NQ  E+G
Sbjct: 738 RKLTSLGLSNNQIAEDG 754


>gi|403273426|ref|XP_003928517.1| PREDICTED: protein NLRC3 [Saimiri boliviensis boliviensis]
          Length = 1037

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 122/250 (48%), Gaps = 12/250 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G +GLAD L+ +    L  L L  N +G TG + ++ AL
Sbjct: 689 SLLVNRSLTSLDLRSNSIGPQGAKGLADSLKIN--RTLTSLSLQKNSIGPTGAQWMADAL 746

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K+  S   LK  +   N + + GA  LA   K  + LE +++  N I   G+ 
Sbjct: 747 -------KQNRS---LKELMLSSNSIGDGGAMALAEALKVNQGLESLDLQSNSISDAGVA 796

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL  A   N+ L  L+L +N+I+ +GA  + +AL    +L  L+L   LL   GA +IA 
Sbjct: 797 ALMGALCTNQALLSLSLRENSISPEGAQAIARALRANSTLKNLDLTANLLHDQGAQAIAV 856

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            +T+N  L  ++L  N I       L +A++    L  +++ EN  G++G   + + +K 
Sbjct: 857 AVTENRALTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENDIGDDGACAVARALKV 916

Query: 460 FGMAAALVLE 469
                AL L+
Sbjct: 917 NTALTALYLQ 926



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 183/421 (43%), Gaps = 59/421 (14%)

Query: 39   KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            +++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA  +A  L  N TL  
Sbjct: 667  RIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKGLADSLKINRTLTS 726

Query: 99   VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
            ++L  N I   G   +  A+K    LK++ +S N  G+ G            MA A  L+
Sbjct: 727  LSLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGG-----------AMALAEALK 775

Query: 159  DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
             ++G    E  D +S   +D+        L  N +                         
Sbjct: 776  VNQGL---ESLDLQSNSISDAGVAALMGALCTNQA------------------------- 807

Query: 219  MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
                    L+ L L +N+  P G + +A  LR++    L+ L L  N L   G + ++ A
Sbjct: 808  --------LLSLSLRENSISPEGAQAIARALRANS--TLKNLDLTANLLHDQGAQAIAVA 857

Query: 279  LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
            +     +  +  + L L+      N ++   A+ L    +  ++L  +++ +N I   G 
Sbjct: 858  V-----TENRALTSLHLQW-----NFIQAGAAQALGQALQLNRSLTSLDLQENDIGDDGA 907

Query: 339  TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             A++ A + N  L  L L   +I   GA  LG+AL+   +L IL+L    +  AGA ++A
Sbjct: 908  CAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALA 967

Query: 399  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              L  N++L  +NL  N + + G + +  A+    +L+ IN+  N  G+ G   + + +K
Sbjct: 968  NALKVNSSLRRLNLQENSLGMDGAIFVATALSGNHRLQHINLQGNHIGDSGARMISEAIK 1027

Query: 459  S 459
            +
Sbjct: 1028 T 1028



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 164/419 (39%), Gaps = 83/419 (19%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  +L    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKGLADSLKINRTLTSL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    +   GA  +A  L  N +L+++ L+ N I   G + L +A+K    L+ +++  
Sbjct: 728  SLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGGAMALAEALKVNQGLESLDLQS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD------- 184
            N   + GV     LM +               C+++     S  EN    EG        
Sbjct: 788  NSISDAGVA---ALMGAL--------------CTNQALLSLSLRENSISPEGAQAIARAL 830

Query: 185  --NSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KTGA 225
              NS L + D  +N  H+   Q+   +   +      H+                 +   
Sbjct: 831  RANSTLKNLDLTANLLHDQGAQAIAVAVTENRALTSLHLQWNFIQAGAAQALGQALQLNR 890

Query: 226  RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
             L  LDL +N  G  G            C     LK+N              AL   Y  
Sbjct: 891  SLTSLDLQENDIGDDGA-----------CAVARALKVNT-------------ALTALYLQ 926

Query: 286  SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                G+P                GA++L       +TLE +++  N I   G  AL++A 
Sbjct: 927  VASIGAP----------------GAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANAL 970

Query: 346  EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  N
Sbjct: 971  KVNSSLRRLNLQENSLGMDGAIFVATALSGNHRLQHINLQGNHIGDSGARMISEAIKTN 1029



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 890  RSLTSLDLQENDIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLE 949

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 950  ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAIFVATALSGNHRLQHINL 1009

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  G+ G   + + +K+
Sbjct: 1010 QGNHIGDSGARMISEAIKT 1028



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 74/141 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL  + + +N I   G   ++DA ++N+ L+ L L+ N+I   GA+ L +A
Sbjct: 714 LADSLKINRTLTSLSLQKNSIGPTGAQWMADALKQNRSLKELMLSSNSIGDGGAMALAEA 773

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L    +  AG +++   L  N  L  ++L  N IS +G   + +A++  
Sbjct: 774 LKVNQGLESLDLQSNSISDAGVAALMGALCTNQALLSLSLRENSISPEGAQAIARALRAN 833

Query: 122 TKLKQINVSENQFGEEGVEEM 142
           + LK ++++ N   ++G + +
Sbjct: 834 STLKNLDLTANLLHDQGAQAI 854



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 79/157 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  + +A
Sbjct: 770 LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQALLSLSLRENSISPEGAQAIARA 829

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  +T+N  L  ++L  N I       L +A++  
Sbjct: 830 LRANSTLKNLDLTANLLHDQGAQAIAVAVTENRALTSLHLQWNFIQAGAAQALGQALQLN 889

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G++G   + + +K      AL L+
Sbjct: 890 RSLTSLDLQENDIGDDGACAVARALKVNTALTALYLQ 926



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 69/132 (52%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  
Sbjct: 741 WMADALKQNRSLKELMLSSNSIGDGGAMALAEALKVNQGLESLDLQSNSISDAGVAALMG 800

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  L+L +  +   GA +IA+ L  N+TL++++LT N +  QG   +  A+  
Sbjct: 801 ALCTNQALLSLSLRENSISPEGAQAIARALRANSTLKNLDLTANLLHDQGAQAIAVAVTE 860

Query: 121 KTKLKQINVSEN 132
              L  +++  N
Sbjct: 861 NRALTSLHLQWN 872



 Score = 41.6 bits (96), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL++A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 946  RTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAIFVATALSGNHRLQ 1005

Query: 70   ILNLGDCLLKSAGASSIAKYLTDN 93
             +NL    +  +GA  I++ +  N
Sbjct: 1006 HINLQGNHIGDSGARMISEAIKTN 1029


>gi|320166084|gb|EFW42983.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 543

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 12/246 (4%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           +  LD+S N  G  GV+ +A+ LR +    +  L+L  N +   G + L++AL     S 
Sbjct: 80  VTRLDMSINEIGDAGVQAIAEALRVNTTVIV--LRLYANQIHDVGAQALAEAL-----SV 132

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            K  + L L++     N++ + GA+ +A   K    L    +  N I   G  A+++A +
Sbjct: 133 NKTVTQLYLQL-----NQIGDVGAQAIAEALKVNTALTVPNLGGNRIGDAGAQAIAEALK 187

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N  +  L+L+ N I   GA  + +AL   P+L  LNL +  +  AGA +IA+ L  N T
Sbjct: 188 VNVTVTELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIAQALKLNQT 247

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
           L  + L  N I   G   + +A++  T L  +++ ENQF + G + + +++K     A L
Sbjct: 248 LTTLYLVRNRIGNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQAIAEVLKVNKRLAWL 307

Query: 467 VLEDDE 472
            L D++
Sbjct: 308 NLPDNQ 313



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 25/281 (8%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I+ VG  AL++A   NK +  L L  N I   GA  + +AL    +L + NLG   + 
Sbjct: 116 NQIHDVGAQALAEALSVNKTVTQLYLQLNQIGDVGAQAIAEALKVNTALTVPNLGGNRIG 175

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            AGA +IA+ L  N T+ +++L  N+I   G   + +A+K    L ++N++ENQ G+ G 
Sbjct: 176 DAGAQAIAEALKVNVTVTELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGA 235

Query: 140 EEMEKLMKSFGMAAALVLEDDE-GECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHN 198
           + + + +K       L L  +  G    +   E         A   N+ L+H D      
Sbjct: 236 QAIAQALKLNQTLTTLYLVRNRIGNVGVQPIAE---------ALQTNTVLTHLDLGE--- 283

Query: 199 ASNQSHNNSNQSHNTSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
                    NQ  +   Q+    LK   RL  L+L DN  G +G E +A+ L+ +    L
Sbjct: 284 ---------NQFADAGAQAIAEVLKVNKRLAWLNLPDNQIGDVGAEAIAEALKVNTT--L 332

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF 298
             L L +N +G T  + + +A H   +S+    + +  +VF
Sbjct: 333 TYLNLRSNCIGNTFARAIDEAHHVNGQSTVDIDNQINPRVF 373



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 13/241 (5%)

Query: 207 SNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
           +NQ H+   Q+   +L     + +L L  N  G +G + +A+ L+ +   AL    L  N
Sbjct: 115 ANQIHDVGAQALAEALSVNKTVTQLYLQLNQIGDVGAQAIAEALKVNT--ALTVPNLGGN 172

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
            +G  G + +++AL      ++     L+L       N++ + GA+ +A   K   TL +
Sbjct: 173 RIGDAGAQAIAEALKVNVTVTE-----LSLHT-----NQIGDAGAQAIAEALKVSPTLTK 222

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + + +N I   G  A++ A + N+ L  L L  N I   G  P+ +AL     L  L+LG
Sbjct: 223 LNLNENQIGDAGAQAIAQALKLNQTLTTLYLVRNRIGNVGVQPIAEALQTNTVLTHLDLG 282

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           +     AGA +IA+ L  N  L  +NL  N+I   G   + +A+K  T L  +N+  N  
Sbjct: 283 ENQFADAGAQAIAEVLKVNKRLAWLNLPDNQIGDVGAEAIAEALKVNTTLTYLNLRSNCI 342

Query: 446 G 446
           G
Sbjct: 343 G 343



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 161/374 (43%), Gaps = 61/374 (16%)

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ------ 126
           + D     A A +IA+ L  NTT+  ++L  N +   G   L +A+K  T + Q      
Sbjct: 1   MSDIQADDADAQTIAEALKVNTTVTWLSLRSNRVGAAGAQALAEALKVNTTVTQLYLGDN 60

Query: 127 ----------------------INVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGEC 164
                                 +++S N+ G+ GV+ + + ++       L L       
Sbjct: 61  RIGDDGAGAIAAALTVNMTVTRLDMSINEIGDAGVQAIAEALRVNTTVIVLRL------- 113

Query: 165 SDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKT 223
                   + + +D  A+     LS N +        Q +   NQ  +   Q+   +LK 
Sbjct: 114 -------YANQIHDVGAQALAEALSVNKT------VTQLYLQLNQIGDVGAQAIAEALKV 160

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
              L   +L  N  G  G + +A+ L+ +    + EL L+ N +G  G + +++AL    
Sbjct: 161 NTALTVPNLGGNRIGDAGAQAIAEALKVNVT--VTELSLHTNQIGDAGAQAIAEAL---- 214

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                + SP   K+ +   N++ + GA+ +A   K  +TL  + + +N I +VG+  +++
Sbjct: 215 -----KVSPTLTKLNL-NENQIGDAGAQAIAQALKLNQTLTTLYLVRNRIGNVGVQPIAE 268

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A + N  L HL+L +N     GA  + + L     LA LNL D  +   GA +IA+ L  
Sbjct: 269 ALQTNTVLTHLDLGENQFADAGAQAIAEVLKVNKRLAWLNLPDNQIGDVGAEAIAEALKV 328

Query: 404 NTTLEDVNLTCNEI 417
           NTTL  +NL  N I
Sbjct: 329 NTTLTYLNLRSNCI 342



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%)

Query: 4   AVFKKLKTLEHVEMPQ---NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           A+ + LK    + +P    N I   G  A+++A + N  +  L+L+ N I   GA  + +
Sbjct: 153 AIAEALKVNTALTVPNLGGNRIGDAGAQAIAEALKVNVTVTELSLHTNQIGDAGAQAIAE 212

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL   P+L  LNL +  +  AGA +IA+ L  N TL  + L  N I   G   + +A++ 
Sbjct: 213 ALKVSPTLTKLNLNENQIGDAGAQAIAQALKLNQTLTTLYLVRNRIGNVGVQPIAEALQT 272

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
            T L  +++ ENQF + G + + +++K     A L L D++
Sbjct: 273 NTVLTHLDLGENQFADAGAQAIAEVLKVNKRLAWLNLPDNQ 313



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 35/290 (12%)

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           AG  +IA+ L  NTT+  + L  N+I   G   L +A+     + Q+ +  NQ G+ G +
Sbjct: 93  AGVQAIAEALRVNTTVIVLRLYANQIHDVGAQALAEALSVNKTVTQLYLQLNQIGDVGAQ 152

Query: 141 EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS 200
            + + +K   +  AL + +  G               D+ A+     L  N +       
Sbjct: 153 AIAEALK---VNTALTVPNLGG-----------NRIGDAGAQAIAEALKVNVT------V 192

Query: 201 NQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEE 259
            +   ++NQ  +   Q+   +LK    L +L+L++N  G  G + +A  L+ +    L  
Sbjct: 193 TELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIAQALKLNQT--LTT 250

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L  N +G  G + +++AL           +   L     G N+  + GA+ +A V K 
Sbjct: 251 LYLVRNRIGNVGVQPIAEALQ----------TNTVLTHLDLGENQFADAGAQAIAEVLKV 300

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI--TYKGAI 367
            K L  + +P N I  VG  A+++A + N  L +LNL  N I  T+  AI
Sbjct: 301 NKRLAWLNLPDNQIGDVGAEAIAEALKVNTTLTYLNLRSNCIGNTFARAI 350



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  + +  N I   G  A+++A + +  L  LNLN+N I   GA  + QA
Sbjct: 182 IAEALKVNVTVTELSLHTNQIGDAGAQAIAEALKVSPTLTKLNLNENQIGDAGAQAIAQA 241

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    + + G   IA+ L  NT L  ++L  N+ +  G   + + +K  
Sbjct: 242 LKLNQTLTTLYLVRNRIGNVGVQPIAEALQTNTVLTHLDLGENQFADAGAQAIAEVLKVN 301

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
            +L  +N+ +NQ G+ G E + + +K
Sbjct: 302 KRLAWLNLPDNQIGDVGAEAIAEALK 327



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + +N I   G  A++ A + N+ L  L L  N I   G  P+ +A
Sbjct: 210 IAEALKVSPTLTKLNLNENQIGDAGAQAIAQALKLNQTLTTLYLVRNRIGNVGVQPIAEA 269

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+LG+     AGA +IA+ L  N  L  +NL  N+I   G   + +A+K  
Sbjct: 270 LQTNTVLTHLDLGENQFADAGAQAIAEVLKVNKRLAWLNLPDNQIGDVGAEAIAEALKVN 329

Query: 122 TKLKQINVSENQFG 135
           T L  +N+  N  G
Sbjct: 330 TTLTYLNLRSNCIG 343


>gi|320165045|gb|EFW41944.1| hypothetical protein CAOG_07076 [Capsaspora owczarzaki ATCC 30864]
          Length = 298

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 13/254 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L +++L++N  G  G   +A+ LR +    + +L L  N +G  G   LS AL
Sbjct: 37  TLKVNTTLTKINLTENQIGDAGARAIAETLRVNTT--VTDLGLWKNQIGDAGAHALSAAL 94

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K    L +K+ + G N++ + GA+ +A   K   TL  + +  N +   G T
Sbjct: 95  --------KVNKTL-IKIDLNG-NQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGAT 144

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++  + NK L  L+L++N I   GA+ + +AL    +L  LNL +  +  AGA +IA+
Sbjct: 145 AIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAE 204

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NTTL  + L  N+I   G   + +A+K N T L  + ++EN+ G  G + + + +K
Sbjct: 205 ALKVNTTLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAIAEALK 264

Query: 459 SFGMAAALVLEDDE 472
                  L+L D++
Sbjct: 265 VNTTLIVLLLGDNQ 278



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 12/229 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
             L DN  G  G   +A+ L+ +    L ++ L  N +G  G + ++       E+ +  
Sbjct: 19  FSLHDNQIGEDGARAIAETLKVNTT--LTKINLTENQIGDAGARAIA-------ETLRVN 69

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            +   L ++   +N++ + GA  L+A  K  KTL ++++  N I   G  A+++  + N 
Sbjct: 70  TTVTDLGLW---KNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNT 126

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L +L L++N +   GA  + + L     L  L+L +  + +AGA +IA+ L  N TL  
Sbjct: 127 TLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTW 186

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +NL+ N+I   G   + +A+K  T L  + + +NQ G+ G   + + +K
Sbjct: 187 LNLSENQIGDAGAQAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALK 235



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 80/151 (52%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  + + +N I   G  ALS A + NK L  ++LN N I   GA  + + L    +LA 
Sbjct: 71  TVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLAN 130

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L +  L  AGA++IA+ L  N  L  ++L  N+I   G L + +A+K    L  +N+S
Sbjct: 131 LGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLS 190

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           ENQ G+ G + + + +K       LVL+ ++
Sbjct: 191 ENQIGDAGAQAIAEALKVNTTLPCLVLQQNQ 221



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 13/217 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L+++DL+ N  G  G + +A+ L+ +   A   L L+NN LG  G   +++ L
Sbjct: 93  ALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLA--NLGLHNNKLGDAGATAIAEML 150

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L+L       N++ N GA  +A   K  KTL  + + +N I   G  
Sbjct: 151 -----KVNKMLTSLSLD-----NNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQ 200

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAILNLGDCLLKSAGASSIA 398
           A+++A + N  L  L L  N I   GA  + +AL      L +L L +  + +AGA +IA
Sbjct: 201 AIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAIA 260

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
           + L  NTTL  + L  N+I   G   + +A K+  +L
Sbjct: 261 EALKVNTTLIVLLLGDNQIGDAGAQAIAEAFKSGAEL 297



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 1/161 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL ++ +  N +   G TA+++  + NK L  L+L++N I   GA+ + +A
Sbjct: 118 IAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEA 177

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-N 120
           L    +L  LNL +  +  AGA +IA+ L  NTTL  + L  N+I   G   + +A+K N
Sbjct: 178 LKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEALKVN 237

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
            T L  + ++EN+ G  G + + + +K       L+L D++
Sbjct: 238 NTGLIVLFLNENEIGNAGAQAIAEALKVNTTLIVLLLGDNQ 278



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+A  K  KTL  +++  N I   G  A+++  + N  L +L L++N +   GA  + + 
Sbjct: 90  LSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEM 149

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L +  + +AGA +IA+ L  N TL  +NL+ N+I   G   + +A+K  
Sbjct: 150 LKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVN 209

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  + + +NQ G+ G   + + +K
Sbjct: 210 TTLPCLVLQQNQIGDAGAHAIAEALK 235



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K  K L  + +  N I + G  A+++A + NK L  LNL++N I   GA  + +A
Sbjct: 146 IAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEA 205

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    +L  L L    +  AGA +IA+ L  +NT L  + L  NEI   G   + +A+K 
Sbjct: 206 LKVNTTLPCLVLQQNQIGDAGAHAIAEALKVNNTGLIVLFLNENEIGNAGAQAIAEALKV 265

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
            T L  + + +NQ G+ G + + +  KS
Sbjct: 266 NTTLIVLLLGDNQIGDAGAQAIAEAFKS 293



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 134/316 (42%), Gaps = 33/316 (10%)

Query: 5   VFKKLK-TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           ++ K+K   E   +  N I   G  A+++  + N  L  +NL +N I   GA  + + L 
Sbjct: 8   LYDKVKNAREWFSLHDNQIGEDGARAIAETLKVNTTLTKINLTENQIGDAGARAIAETLR 67

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
              ++  L L    +  AGA +++  L  N TL  ++L  N+I   G   + + +K  T 
Sbjct: 68  VNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTT 127

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           L  + +  N+ G+ G   + +++K   M  +L L++++   +      E+ + N +    
Sbjct: 128 LANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTW- 186

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGV 242
              NLS                  NQ  +   Q+   +LK    L  L L  N  G  G 
Sbjct: 187 --LNLSE-----------------NQIGDAGAQAIAEALKVNTTLPCLVLQQNQIGDAGA 227

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 302
             +A+ L+ +    L  L LN N +G  G + +++AL               L V + G 
Sbjct: 228 HAIAEALKVNNT-GLIVLFLNENEIGNAGAQAIAEALK----------VNTTLIVLLLGD 276

Query: 303 NRLENEGAKMLAAVFK 318
           N++ + GA+ +A  FK
Sbjct: 277 NQIGDAGAQAIAEAFK 292



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 1/124 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + + +N I   G  A+++A + N  L  L L  N I   GA  + +A
Sbjct: 174 IAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLQQNQIGDAGAHAIAEA 233

Query: 62  LS-KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L      L +L L +  + +AGA +IA+ L  NTTL  + L  N+I   G   + +A K+
Sbjct: 234 LKVNNTGLIVLFLNENEIGNAGAQAIAEALKVNTTLIVLLLGDNQIGDAGAQAIAEAFKS 293

Query: 121 KTKL 124
             +L
Sbjct: 294 GAEL 297


>gi|189502739|ref|YP_001958456.1| hypothetical protein Aasi_1436 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498180|gb|ACE06727.1| hypothetical protein Aasi_1436 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 815

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 198/457 (43%), Gaps = 49/457 (10%)

Query: 7   KKLKTLEHVEMPQNGIYHV--GITALSDAFEEN---KKLRHLNLNDNTITYKGAIPLGQA 61
           KKL  L    +     YH+   I +L  AF  +    K++ ++L++N I  +GA+ L + 
Sbjct: 365 KKLNKLTPERISSFAFYHLIRNIKSLPQAFWPHIKGTKIQSIDLSENEIGAQGAVKLAKY 424

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     +  + L    + + GA    K L   T +  V+L+ N I  QG  +L+K ++  
Sbjct: 425 LQD-TQVHTVYLSFNGIGAQGAVEFTKNL-QGTRVHTVDLSWNRIGAQGVEELIKHLQ-A 481

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           TK+  +N+  NQ G +GVEE+ K ++   +    + E+  G+   EE             
Sbjct: 482 TKVHTVNLRLNQIGAQGVEELAKNLQGTSVHTVNLSENHIGDQGAEEL------------ 529

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
                   +      H      + +SNQ      +       G  +  +DLS N  G  G
Sbjct: 530 ------FRYLQGTRVHTV----YLSSNQIGAQGAERLAKQLLGTSVHTIDLSGNHIGDRG 579

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
            EG A  L+ +    ++   L+ N +G  G    +K L              ++      
Sbjct: 580 AEGFAQHLQRTSVHTVD---LSENHIGDRGAIEFAKNLQGT-----------SVHTVYLN 625

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
            N++  +GA  LA   +   +++++ +  N I   G   L+   +  + +  +NL  N I
Sbjct: 626 HNKIGAQGAIELAKHLQG-SSVQKINLSHNQIGAQGAEGLAKHLQGTQ-VHTINLWANQI 683

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA+   + L    ++  + LG   + + GA  +AK L   T++  V+LT N+I  QG
Sbjct: 684 GAQGAVEFAKNLQG-TNVHTVYLGYNQIGAQGAEGLAKNL-QGTSVHTVDLTSNQIGDQG 741

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              L K ++  T++  +N+S N  G +G EE+ K ++
Sbjct: 742 AEGLAKYLQG-TQVHTVNLSSNNIGAQGAEELAKSLQ 777



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           ++L +  + + GA  +AKYL D T +  V L+ N I  QG ++  K ++  T++  +++S
Sbjct: 406 IDLSENEIGAQGAVKLAKYLQD-TQVHTVYLSFNGIGAQGAVEFTKNLQG-TRVHTVDLS 463

Query: 442 ENQFGEEGVEEMEKLMKS 459
            N+ G +GVEE+ K +++
Sbjct: 464 WNRIGAQGVEELIKHLQA 481


>gi|401839341|gb|EJT42605.1| RNA1-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 407

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 118/228 (51%), Gaps = 13/228 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++ SDNAFG   +E L + +  +    ++ L L+NNG+G    + + KAL    ++ K  
Sbjct: 113 VNFSDNAFGLRTIELLENYIAHAV--NIKHLILSNNGMGPFAGERIGKALFHLAQNKKAA 170

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
             P  L+ FI GRNRLEN  A  LA   K   + L+ V++ QNGI   G+ T +    + 
Sbjct: 171 SKPF-LETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQY 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT--DN 404
            K L   +L DNT T   +  L +AL     SL  LNL DCLLK+ G+  + K  T    
Sbjct: 230 LKALEIFDLQDNTFTKHASFILAKALPTWKDSLYELNLNDCLLKTTGSDEVFKVFTKVKF 289

Query: 405 TTLEDVNLTCNEISVQGGLD--LVKAMK--NKTKLKQINVSENQFGEE 448
           + L  +    NE+S Q  ++   + AM+  N  KL+++ ++ N+  E+
Sbjct: 290 SNLHVLKFEYNEMS-QDTIESYFLPAMEKGNLPKLEKLEINGNRLDED 336



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    +  K L   +L DNT T   +  L +AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKALEIFDLQDNTFTKHASFILAKALPTWKDSLY 263

Query: 70  ILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLD--LVKAMK--NKTK 123
            LNL DCLLK+ G+  + K  T    + L  +    NE+S Q  ++   + AM+  N  K
Sbjct: 264 ELNLNDCLLKTTGSDEVFKVFTKVKFSNLHVLKFEYNEMS-QDTIESYFLPAMEKGNLPK 322

Query: 124 LKQINVSENQFGEE 137
           L+++ ++ N+  E+
Sbjct: 323 LEKLEINGNRLDED 336


>gi|413937811|gb|AFW72362.1| putative RAN GTPase activating family protein [Zea mays]
          Length = 559

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L++SDNA G  GV   ++LL+S    +LEEL + N+G+     +  +KAL +  
Sbjct: 231 GSVLRYLNISDNALGEKGVRAFSELLKSQ--ESLEELYVMNDGI----SEEAAKALSELI 284

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +++K      LKV     N   +EGA  +A + K+   +E        I   G  ALS+
Sbjct: 285 PATEK------LKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSE 338

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN       + L + L KLP L  L L D  L++ G  +IAK L  
Sbjct: 339 ALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDLVELYLSDLNLENKGTIAIAKALEQ 398

Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +   LE + +  NEI+ +   DL K +     LK++ ++EN+  ++G
Sbjct: 399 SAPQLEVLEIAGNEINAKAAPDLAKCLAAMQSLKKLTLAENELKDDG 445



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +E        I   G  ALS+A     +L+ L+L DN       + L + 
Sbjct: 308 IAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKT 367

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           L KLP L  L L D  L++ G  +IAK L  +   LE + +  NEI+ +   DL K +  
Sbjct: 368 LPKLPDLVELYLSDLNLENKGTIAIAKALEQSAPQLEVLEIAGNEINAKAAPDLAKCLAA 427

Query: 121 KTKLKQINVSENQFGEEG 138
              LK++ ++EN+  ++G
Sbjct: 428 MQSLKKLTLAENELKDDG 445



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A++ A E++  +L  L +  N I  K A  L +
Sbjct: 364 LSKTLPKLPDLVELYLSDLNLENKGTIAIAKALEQSAPQLEVLEIAGNEINAKAAPDLAK 423

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D +  L++++++ N +   G     +A+ 
Sbjct: 424 CLAAMQSLKKLTLAENELKDDGAVIIAKSLEDGHIDLKELDVSVNMLQRVGARCFARAVA 483

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           NK   + +N++ N    EG++E+E+++K+
Sbjct: 484 NKPAFELLNINGNFISGEGIDEVEEILKA 512



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            +N   GI    +    L    ES K + + + +  F+AGR   E+E   ++    K L+
Sbjct: 177 FSNRSFGIGAANVAGPIL----ESVKNQLTEVDISDFVAGRP--EDEALDVMRIFSKALE 230

Query: 322 --TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N +   G+ A S+  +  ++L  L + ++ I+ + A  L + +     L
Sbjct: 231 GSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKL 290

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK+++
Sbjct: 291 KVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLD 350

Query: 440 VSENQFG 446
           + +N FG
Sbjct: 351 LRDNLFG 357



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 61/125 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A S+  +  + L  L + ++ I+ + A  L + +     L +
Sbjct: 233 VLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKV 292

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 293 LHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLR 352

Query: 131 ENQFG 135
           +N FG
Sbjct: 353 DNLFG 357



 Score = 38.5 bits (88), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 62/127 (48%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + K  ++LE + +  +GI      ALS+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 255 LLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKR 314

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P++         + S G  ++++ L   T L+ ++L  N   V  GL L K +     L
Sbjct: 315 SPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDL 374

Query: 125 KQINVSE 131
            ++ +S+
Sbjct: 375 VELYLSD 381


>gi|387597299|gb|EIJ94919.1| hypothetical protein NEPG_00444 [Nematocida parisii ERTm1]
          Length = 368

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 125/241 (51%), Gaps = 27/241 (11%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           ++V  D+SDNA    G+E L+ ++       L+ L +NNNG+GI G + LS+AL +  + 
Sbjct: 94  KIVYFDISDNALSLHGMEILSPMIEK--MHLLKHLVMNNNGIGIDGGEFLSQALENLSKE 151

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG----ITAL 341
           SK       L+    GRNRLE E A  L          + +++ QN I  +     +T+L
Sbjct: 152 SK------VLESLEVGRNRLE-ESATKLGKALSLFPCFDALKIYQNSINSINTGNLLTSL 204

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           S       N+R L+++DN +   G+  L QA+   P +  LN+ DC++   G   +A  L
Sbjct: 205 STL-----NMRILDISDNFLLEYGSTVLSQAMKSWP-IEYLNIADCMMSDKGVEVLASAL 258

Query: 402 TDNTTLE-------DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            ++  ++       +++++ N+I+ +  LD ++A+  K    +  ++ N+ G++ + +++
Sbjct: 259 PEHIYIQGELVSEKEIDMSYNDIT-EESLDSIRAIIKKICHTKFILTGNEIGKDEISQIK 317

Query: 455 K 455
           K
Sbjct: 318 K 318


>gi|403217663|emb|CCK72156.1| hypothetical protein KNAG_0J00730 [Kazachstania naganishii CBS
           8797]
          Length = 383

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 118/233 (50%), Gaps = 13/233 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC--Y 283
           +L  +DLSDNA G   ++ L   +  +    L  L L+NNG+G    + + KALH     
Sbjct: 95  KLHTVDLSDNALGLRTIDHLERFIGGA--KPLRHLYLSNNGMGPFAGERIGKALHKLAKV 152

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALS 342
           ++ + + S L L+ F+ GRNRLEN     +A   +     L+ V + QNGI   GI  L 
Sbjct: 153 QAPEDKASGL-LQTFVCGRNRLENGAMPGIALGLRAHGAELQCVRLFQNGIRPRGIAQLL 211

Query: 343 D-AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKY 400
           D        LR L+L DNT T +G+  L + L +  + L  LNL DCLLK  GAS +   
Sbjct: 212 DHGLCHVPTLRTLDLQDNTCTLRGSQALARTLPRWATTLEELNLNDCLLKGLGASQVLAV 271

Query: 401 LTDN--TTLEDVNLTCNEISVQGGLD-LVKAMK--NKTKLKQINVSENQFGEE 448
           L       L  + L  NEI+ Q   + LV A++  +  +L  + ++ N+F E+
Sbjct: 272 LKKERFPRLHTLKLEYNEITQQTLEEALVAAIEADHLPQLHHLEINGNRFEED 324



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 7/133 (5%)

Query: 12  LEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V + QNGI   GI  L D        LR L+L DNT T +G+  L + L +   +L 
Sbjct: 192 LQCVRLFQNGIRPRGIAQLLDHGLCHVPTLRTLDLQDNTCTLRGSQALARTLPRWATTLE 251

Query: 70  ILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEISVQGGLD-LVKAMK--NKTKL 124
            LNL DCLLK  GAS +   L       L  + L  NEI+ Q   + LV A++  +  +L
Sbjct: 252 ELNLNDCLLKGLGASQVLAVLKKERFPRLHTLKLEYNEITQQTLEEALVAAIEADHLPQL 311

Query: 125 KQINVSENQFGEE 137
             + ++ N+F E+
Sbjct: 312 HHLEINGNRFEED 324


>gi|219884923|gb|ACL52836.1| unknown [Zea mays]
          Length = 541

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L++SDNA G  GV   ++LL+S    +LEEL + N+G+        +KAL +  
Sbjct: 213 GSVLRYLNISDNALGEKGVRAFSELLKSQE--SLEELYVMNDGISEEA----AKALSELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +++K      LKV     N   +EGA  +A + K+   +E        I   G  ALS+
Sbjct: 267 PATEK------LKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN+      + L + L KLP L  L L D  L++ G  +IAK L  
Sbjct: 321 ALGTCTRLKKLDLRDNSFGVDAGLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQ 380

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +   LE + +  NEI+ +   DL + +     LK++ ++EN+  + G
Sbjct: 381 SALQLEVLEIAGNEINAKAAPDLAECLAVMQSLKKLTLAENELKDNG 427



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 139/337 (41%), Gaps = 59/337 (17%)

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           L+ +N+S+N  GE+GV    +L+KS                  +E  EE    ND  +E 
Sbjct: 216 LRYLNISDNALGEKGVRAFSELLKS------------------QESLEELYVMNDGISEE 257

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
               LS              HNN          + M +K    +     S    G  G  
Sbjct: 258 AAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEM-VKRSPNVESFRCSATRIGSDGGV 316

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
            L++ L    C  L++L L +N  G+     LS+ L            P  ++++++  N
Sbjct: 317 ALSEAL--GTCTRLKKLDLRDNSFGVDAGLALSETLPKL---------PDLVELYLSDLN 365

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
            LEN+G   +A   K+                   +AL         L  L +  N I  
Sbjct: 366 -LENKGTIAIAKALKQ-------------------SAL--------QLEVLEIAGNEINA 397

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGG 422
           K A  L + L+ + SL  L L +  LK  GA  IAK L D ++ L++++++ N +   G 
Sbjct: 398 KAAPDLAECLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGA 457

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
               +A+ NK    Q+N++ N   +EGV+E+++++K+
Sbjct: 458 RCFTRAVANKPDFVQLNINGNFISDEGVDEVKEILKA 494



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +E        I   G  ALS+A     +L+ L+L DN+      + L + 
Sbjct: 290 IAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNSFGVDAGLALSET 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KLP L  L L D  L++ G  +IAK L  +   LE + +  NEI+ +   DL + +  
Sbjct: 350 LPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPDLAECLAV 409

Query: 121 KTKLKQINVSENQFGEEG 138
              LK++ ++EN+  + G
Sbjct: 410 MQSLKKLTLAENELKDNG 427



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A++ A +++  +L  L +  N I  K A  L +
Sbjct: 346 LSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPDLAE 405

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D ++ L++++++ N +   G     +A+ 
Sbjct: 406 CLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGARCFTRAVA 465

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           NK    Q+N++ N   +EGV+E+++++K+
Sbjct: 466 NKPDFVQLNINGNFISDEGVDEVKEILKA 494



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL- 320
            +N   GI    +    L    ES K + + + +  F+AGR+  E+E   ++    K L 
Sbjct: 159 FSNRSFGIGAANVAGPIL----ESVKNQLTEVDISDFVAGRS--EDEALDVMRIFSKALD 212

Query: 321 -KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N +   G+ A S+  +  ++L  L + ++ I+ + A  L + +     L
Sbjct: 213 GSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKL 272

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK+++
Sbjct: 273 KVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLD 332

Query: 440 VSENQFG 446
           + +N FG
Sbjct: 333 LRDNSFG 339



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 61/125 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A S+  +  + L  L + ++ I+ + A  L + +     L +
Sbjct: 215 VLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKV 274

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 275 LHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLR 334

Query: 131 ENQFG 135
           +N FG
Sbjct: 335 DNSFG 339



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 69/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            + + K  ++LE + +  +GI      ALS+     +KL+ L+ ++N    +GA+ + + 
Sbjct: 234 FSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEM 293

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P++         + S G  ++++ L   T L+ ++L  N   V  GL L + +   
Sbjct: 294 VKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNSFGVDAGLALSETLPKL 353

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++ +S+     +G   + K +K
Sbjct: 354 PDLVELYLSDLNLENKGTIAIAKALK 379


>gi|392331630|ref|XP_003752343.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Rattus
            norvegicus]
 gi|392351031|ref|XP_003750824.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Rattus
            norvegicus]
          Length = 1157

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 16/266 (6%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLL---RSSCCFALEELKLNNNGLGITGCKLLS 276
            SL     LV LDL  N+ GP G + LAD L   R+    +L+   + ++G+      L+S
Sbjct: 781  SLLVNRSLVTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNVIKDDGVMYMAEALVS 840

Query: 277  KALHDCYESSKKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
              +    +  K    P              +L+  +   N + + GA  LA   K  + L
Sbjct: 841  NQIISTLQLQKNLIGPRGAQQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKVNQGL 900

Query: 324  ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
            E +++  N I + G+  L  A   N+ L  LNL +N+I+ +GA  L QAL +  +L  L+
Sbjct: 901  ENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQALCRNTTLKHLD 960

Query: 384  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
            L   LL   GA +IA  + +N +L  ++L  N I       L +A++    L  +++ EN
Sbjct: 961  LTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQEN 1020

Query: 444  QFGEEGVEEMEKLMKSFGMAAALVLE 469
              G+EG   +   +K      AL L+
Sbjct: 1021 AIGDEGASSVAGALKVNTTLTALYLQ 1046



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 189/446 (42%), Gaps = 63/446 (14%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G   L+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 760  IQKISLAENQIGNKGARGLARSLLVNRSLVTLDLRSNSIGPQGAKALADALKINRTLTSL 819

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L   ++K  G   +A+ L  N  +  + L  N I  +G   +  A+K    L+++  S 
Sbjct: 820  SLQSNVIKDDGVMYMAEALVSNQIISTLQLQKNLIGPRGAQQMADALKKNRSLRELMFSS 879

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G            MA A  L+ ++G                     +N +L   
Sbjct: 880  NTIGDRG-----------AMALAEALKVNQGL--------------------ENLDL--- 905

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLAD-LL 249
                           SN   NT     M +L T   L  L+L +N+  P G + LA  L 
Sbjct: 906  --------------QSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQALC 951

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            R++    L+ L L  N L   G + ++ A+          G   +L       N ++   
Sbjct: 952  RNT---TLKHLDLTANLLHDQGAQAIATAV----------GENCSLTHLHLQWNFIQAGA 998

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            A+ L    +  +TL  +++ +N I   G ++++ A + N  L  L L   +I  +GA  L
Sbjct: 999  ARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQAL 1058

Query: 370  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            G+AL+   +L IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+
Sbjct: 1059 GEALAVNRTLEILDLRGNDVGVAGAKALANGLKLNSSLRRLNLQENSLGMDGAIYVATAL 1118

Query: 430  KNKTKLKQINVSENQFGEEGVEEMEK 455
                 L  IN+  N  GE G   + +
Sbjct: 1119 SENHGLHHINLQGNPIGESGARMISQ 1144



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 161/380 (42%), Gaps = 43/380 (11%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K  +TL  + +  N I   G+  +++A   N+ +  L L  N I  +GA  +  A
Sbjct: 806  LADALKINRTLTSLSLQSNVIKDDGVMYMAEALVSNQIISTLQLQKNLIGPRGAQQMADA 865

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L K  SL  L      +   GA ++A+ L  N  LE+++L  N IS  G   L++A+   
Sbjct: 866  LKKNRSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTN 925

Query: 122  TKLKQINVSENQFGEEGVEEMEK------LMKSFGMAAALVLEDDEGECSDEEQDEESEE 175
              L  +N+ EN    EG + + +       +K   + A L+   D+G             
Sbjct: 926  QTLSSLNLRENSISPEGAQALAQALCRNTTLKHLDLTANLL--HDQG------------A 971

Query: 176  ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
            +  + A G+N +L+     H H   N     + ++   + Q + +L T      LDL +N
Sbjct: 972  QAIATAVGENCSLT-----HLHLQWNFIQAGAARALGQALQLNRTLTT------LDLQEN 1020

Query: 236  AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
            A G  G   +A  L+ +    L  L L    +G  G + L +AL               L
Sbjct: 1021 AIGDEGASSVAGALKVNT--TLTALYLQVASIGSQGAQALGEAL----------AVNRTL 1068

Query: 296  KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
            ++     N +   GAK LA   K   +L R+ + +N +   G   ++ A  EN  L H+N
Sbjct: 1069 EILDLRGNDVGVAGAKALANGLKLNSSLRRLNLQENSLGMDGAIYVATALSENHGLHHIN 1128

Query: 356  LNDNTITYKGAIPLGQALSK 375
            L  N I   GA  + QA+ K
Sbjct: 1129 LQGNPIGESGARMISQAIEK 1148



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 172/404 (42%), Gaps = 49/404 (12%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  N I   G + + +AL     ++
Sbjct: 786  RSLVTLDLRSNSIGPQGAKALADALKINRTLTSLSLQSNVIKDDGVMYMAEALVSNQIIS 845

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L L   L+   GA  +A  L  N +L ++  + N I  +G + L +A+K    L+ +++
Sbjct: 846  TLQLQKNLIGPRGAQQMADALKKNRSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDL 905

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
              N     GV     LM++               C+++     +  EN    EG      
Sbjct: 906  QSNAISNTGVA---VLMRAL--------------CTNQTLSSLNLRENSISPEGAQALAQ 948

Query: 184  ---DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
                N+ L H D       +N  H+   Q+  T+   + SL        L L  N     
Sbjct: 949  ALCRNTTLKHLDLT-----ANLLHDQGAQAIATAVGENCSL------THLHLQWNFIQAG 997

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
                L   L+ +    L  L L  N +G  G   ++ AL       K   +  AL + +A
Sbjct: 998  AARALGQALQLN--RTLTTLDLQENAIGDEGASSVAGAL-------KVNTTLTALYLQVA 1048

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
                + ++GA+ L       +TLE +++  N +   G  AL++  + N +LR LNL +N+
Sbjct: 1049 S---IGSQGAQALGEALAVNRTLEILDLRGNDVGVAGAKALANGLKLNSSLRRLNLQENS 1105

Query: 361  ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            +   GAI +  ALS+   L  +NL    +  +GA  I++ +  N
Sbjct: 1106 LGMDGAIYVATALSENHGLHHINLQGNPIGESGARMISQAIEKN 1149


>gi|66803749|ref|XP_635706.1| hypothetical protein DDB_G0290485 [Dictyostelium discoideum AX4]
 gi|60463940|gb|EAL62103.1| hypothetical protein DDB_G0290485 [Dictyostelium discoideum AX4]
          Length = 818

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 210/460 (45%), Gaps = 65/460 (14%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  K  T+  +E+ QNGI +     + +    NK + HLNL+ N+I              
Sbjct: 375 LLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSI-------------- 420

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
                          + GA  I+K +  NTTL +++L+ N I ++G   L +A+++ T L
Sbjct: 421 --------------GNEGAEEISKAILVNTTLINLDLSQNCIGLKGSKALGQALQSTTIL 466

Query: 125 KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD 184
           + IN+S+N+FG +G++    +++S G  ++L     E + S  + +E+S +    +A   
Sbjct: 467 QTINLSKNRFGAKGIDF---IVESIGKNSSLT----EVDFSKNDLNEKSSKY-VGEAIRK 518

Query: 185 NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGV 242
           +  L+             S N  +   +  +  ++S  ++    +  LD+S N F   G+
Sbjct: 519 HPCLA-------------SVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYKGL 565

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 302
           + LA  L  S C ++  L L  + +G  G   L  AL        +  S + L +     
Sbjct: 566 KPLAAAL--SMCQSITYLDLTGDSIGDKGAVQLGDAL-------AQNHSIINLSL---AF 613

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNG-IYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N +   GA  L    K  ++LE +++  N  I H+G   +++    NK +  L++  N +
Sbjct: 614 NNIGASGATSLGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGL 673

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  LG+AL +  ++  L L    +   G  +++  L  N ++ ++NL+ N I+  G
Sbjct: 674 GPIGAKRLGEALRQNSTITDLQLRGNEIGDEGCRALSDSLKQNQSITELNLSGNGITNDG 733

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSF 460
              L +A+     L  I ++ N    +GV+ M E L++S+
Sbjct: 734 AKALCEALWYNQSLASIQLNHNNINTQGVQFMKELLLRSY 773



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 153/377 (40%), Gaps = 32/377 (8%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           +S +   LT NTT+  + L+ N I  +    + + +     +  +N+S N  G EG EE+
Sbjct: 369 SSFVRMLLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEI 428

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
               K+  +   L+  D    C   +  +   +   S       NLS N       A   
Sbjct: 429 S---KAILVNTTLINLDLSQNCIGLKGSKALGQALQSTTILQTINLSKN----RFGAKGI 481

Query: 203 SHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKL 262
                +   N+S            L E+D S N       + + + +R   C A   + L
Sbjct: 482 DFIVESIGKNSS------------LTEVDFSKNDLNEKSSKYVGEAIRKHPCLA--SVNL 527

Query: 263 NNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
            +  L     K +S+ +    ++S+       +      RN    +G K LAA     ++
Sbjct: 528 CDTKLSPESMKYISEGI----QASQ------TIAYLDMSRNEFNYKGLKPLAAALSMCQS 577

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           +  +++  + I   G   L DA  +N ++ +L+L  N I   GA  LG AL    SL IL
Sbjct: 578 ITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATSLGNALKTNRSLEIL 637

Query: 383 NLG-DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           +L  +  +   GA  IA+ L  N  +  +++  N +   G   L +A++  + +  + + 
Sbjct: 638 DLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGEALRQNSTITDLQLR 697

Query: 442 ENQFGEEGVEEMEKLMK 458
            N+ G+EG   +   +K
Sbjct: 698 GNEIGDEGCRALSDSLK 714



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 153/366 (41%), Gaps = 60/366 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L    +    L+ + + +N     GI  + ++  +N  L  ++ + N +  K +  +G+A
Sbjct: 456 LGQALQSTTILQTINLSKNRFGAKGIDFIVESIGKNSSLTEVDFSKNDLNEKSSKYVGEA 515

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + K P LA +NL D  L       I++ +  + T+  ++++ NE + +G   L  A+   
Sbjct: 516 IRKHPCLASVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNEFNYKGLKPLAAALSMC 575

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             +  ++++ +  G++G  ++       G A A                           
Sbjct: 576 QSITYLDLTGDSIGDKGAVQL-------GDALA--------------------------- 601

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA-FGPI 240
                       NHS    + + NN   S  TS  +  +LKT   L  LDLS N   G +
Sbjct: 602 -----------QNHSIINLSLAFNNIGASGATSLGN--ALKTNRSLEILDLSINPEIGHL 648

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G   +A+ L  +    + +L +  NGLG  G K L +AL           + L L+    
Sbjct: 649 GAIHIAEGLAMNK--KISKLSMCTNGLGPIGAKRLGEALRQ-----NSTITDLQLR---- 697

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
             N + +EG + L+   K+ +++  + +  NGI + G  AL +A   N++L  + LN N 
Sbjct: 698 -GNEIGDEGCRALSDSLKQNQSITELNLSGNGITNDGAKALCEALWYNQSLASIQLNHNN 756

Query: 361 ITYKGA 366
           I  +G 
Sbjct: 757 INTQGV 762



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNG-IYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           L    K  ++LE +++  N  I H+G   +++    NKK+  L++  N +   GA  LG+
Sbjct: 624 LGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGE 683

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL +  ++  L L    +   G  +++  L  N ++ ++NL+ N I+  G   L +A+  
Sbjct: 684 ALRQNSTITDLQLRGNEIGDEGCRALSDSLKQNQSITELNLSGNGITNDGAKALCEALWY 743

Query: 121 KTKLKQINVSENQFGEEGVEEM-EKLMKSF 149
              L  I ++ N    +GV+ M E L++S+
Sbjct: 744 NQSLASIQLNHNNINTQGVQFMKELLLRSY 773



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 82/171 (47%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N + N+ A  +       KT+  + +  N I + G   +S A   N  L +L+L+ N I
Sbjct: 389 QNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEISKAILVNTTLINLDLSQNCI 448

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             KG+  LGQAL     L  +NL      + G   I + +  N++L +V+ + N+++ + 
Sbjct: 449 GLKGSKALGQALQSTTILQTINLSKNRFGAKGIDFIVESIGKNSSLTEVDFSKNDLNEKS 508

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
              + +A++    L  +N+ + +   E ++ + + +++    A L +  +E
Sbjct: 509 SKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNE 559


>gi|343477062|emb|CCD12017.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 448

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 15/242 (6%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  LDLS N  GP G + +A LL      AL+ ++L  N LG +G  +++ A+       
Sbjct: 179 LTSLDLSLNEIGPGGAKSIAKLLEIPDS-ALKCVQLYGNYLGPSGVAVIALAVRRNR--- 234

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS-DAF 345
                  +LK    G N   +E A  LA +  +  TLER+++  N I  VGI  L+ +  
Sbjct: 235 -------SLKQLTLGNNNATDEAAVQLAEMLSENSTLERLDLRLNVITAVGIRTLAQEGL 287

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQAL--SKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            +N +L  L+L  N I   G   + Q+L  S++ +L++L+L  C L   G   +A  +  
Sbjct: 288 GQNGSLLSLSLAGNPIGSVGGEEISQSLILSQVTALSVLDLSSCQLGPTGGMRVANLIAT 347

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE-EGVEEMEKLMKSFGM 462
           ++T+ DVNL+ N++  +  + +  ++ N   +  +N+S N+ GE      +E + +++ M
Sbjct: 348 SSTITDVNLSDNKLDDEASVSIANSIINGLSISMLNLSRNEIGEWSACNLIEAIQRNYRM 407

Query: 463 AA 464
            +
Sbjct: 408 VS 409



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 4/156 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALS-DAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA +  +  TLE +++  N I  VGI  L+ +   +N  L  L+L  N I   G   + Q
Sbjct: 254 LAEMLSENSTLERLDLRLNVITAVGIRTLAQEGLGQNGSLLSLSLAGNPIGSVGGEEISQ 313

Query: 61  AL--SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           +L  S++ +L++L+L  C L   G   +A  +  ++T+ DVNL+ N++  +  + +  ++
Sbjct: 314 SLILSQVTALSVLDLSSCQLGPTGGMRVANLIATSSTITDVNLSDNKLDDEASVSIANSI 373

Query: 119 KNKTKLKQINVSENQFGE-EGVEEMEKLMKSFGMAA 153
            N   +  +N+S N+ GE      +E + +++ M +
Sbjct: 374 INGLSISMLNLSRNEIGEWSACNLIEAIQRNYRMVS 409


>gi|428167726|gb|EKX36680.1| hypothetical protein GUITHDRAFT_155158 [Guillardia theta CCMP2712]
          Length = 350

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 13/230 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DL+    GP+G   L DLL  +    ++ L L +  LG  G   +++ LH         
Sbjct: 16  VDLNSERIGPLGAGQLGDLLAHNST--VDGLDLRDTILGAVGATHIARMLH--------- 64

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            +   L+      N +E+ GA  LA   K   TL ++E+ +NGI   G   ++DA  +N 
Sbjct: 65  -TNTTLQTLDLASNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNT 123

Query: 350 NLRHLNLNDNTITYKGAIPLGQALS-KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
           +L++L    N     GA  L + L+ +  +L  L+LG   + + GA ++A  LT N  LE
Sbjct: 124 SLQYLGFAFNGFGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALACGLTKNHWLE 183

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            + L  N I+  G L+L +AM+  T L  + V  N   + G  E+   ++
Sbjct: 184 TLELGYNGITDAGALELARAMRTNTVLTSLGVPSNGISDAGAAELANALR 233



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 13/229 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDL D   G +G   +A +L ++    L+ L L +N +   G   L++A+       K  
Sbjct: 44  LDLRDTILGAVGATHIARMLHTNTT--LQTLDLASNAIEDRGATALAEAI-------KVN 94

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE-EN 348
            + + L++    RN + +EGA+ +A   ++  +L+ +    NG    G T L++    +N
Sbjct: 95  NTLVKLEL---QRNGISSEGARYIADALRQNTSLQYLGFAFNGFGDAGATHLAEVLAGQN 151

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L+ L+L  N +   GA  L   L+K   L  L LG   +  AGA  +A+ +  NT L 
Sbjct: 152 TTLKQLDLGFNGVCTDGARALACGLTKNHWLETLELGYNGITDAGALELARAMRTNTVLT 211

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            + +  N IS  G  +L  A+++   L Q+ +S N  G +G +E+  ++
Sbjct: 212 SLGVPSNGISDAGAAELANALRDNCTLVQVGLSSNSIGNKGAKELADVL 260



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 15/241 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L T   L  LDL+ NA    G   LA+ ++ +    L +L+L  NG+   G + ++ AL 
Sbjct: 63  LHTNTTLQTLDLASNAIEDRGATALAEAIKVNNT--LVKLELQRNGISSEGARYIADAL- 119

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGIT 339
                  ++ + L    F    N   + GA  LA V   +  TL+++++  NG+   G  
Sbjct: 120 -------RQNTSLQYLGF--AFNGFGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGAR 170

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL+    +N  L  L L  N IT  GA+ L +A+     L  L +    +  AGA+ +A 
Sbjct: 171 ALACGLTKNHWLETLELGYNGITDAGALELARAMRTNTVLTSLGVPSNGISDAGAAELAN 230

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE--EGVEEMEKLM 457
            L DN TL  V L+ N I  +G  +L   +     L+ + + EN   E  EG   + K++
Sbjct: 231 ALRDNCTLVQVGLSSNSIGNKGAKELADVLNMNYALETLYLEENDVDEDGEGAVALRKVV 290

Query: 458 K 458
           K
Sbjct: 291 K 291



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K   TL  +E+ +NGI   G   ++DA  +N  L++L    N     GA  L + 
Sbjct: 87  LAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNTSLQYLGFAFNGFGDAGATHLAEV 146

Query: 62  LS-KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L+ +  +L  L+LG   + + GA ++A  LT N  LE + L  N I+  G L+L +AM+ 
Sbjct: 147 LAGQNTTLKQLDLGFNGVCTDGARALACGLTKNHWLETLELGYNGITDAGALELARAMRT 206

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
            T L  + V  N   + G  E+   ++
Sbjct: 207 NTVLTSLGVPSNGISDAGAAELANALR 233



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 5/167 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFE-ENKKLRHLNLNDNTITYKGAIPLGQ 60
           +A   ++  +L+++    NG    G T L++    +N  L+ L+L  N +   GA  L  
Sbjct: 115 IADALRQNTSLQYLGFAFNGFGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALAC 174

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L+K   L  L LG   +  AGA  +A+ +  NT L  + +  N IS  G  +L  A+++
Sbjct: 175 GLTKNHWLETLELGYNGITDAGALELARAMRTNTVLTSLGVPSNGISDAGAAELANALRD 234

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE----DDEGE 163
              L Q+ +S N  G +G +E+  ++        L LE    D++GE
Sbjct: 235 NCTLVQVGLSSNSIGNKGAKELADVLNMNYALETLYLEENDVDEDGE 281



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 2/139 (1%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +++  NG+   G  AL+    +N  L  L L  N IT  GA+ L +A+     L  
Sbjct: 153 TLKQLDLGFNGVCTDGARALACGLTKNHWLETLELGYNGITDAGALELARAMRTNTVLTS 212

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L +    +  AGA+ +A  L DN TL  V L+ N I  +G  +L   +     L+ + + 
Sbjct: 213 LGVPSNGISDAGAAELANALRDNCTLVQVGLSSNSIGNKGAKELADVLNMNYALETLYLE 272

Query: 131 ENQFGE--EGVEEMEKLMK 147
           EN   E  EG   + K++K
Sbjct: 273 ENDVDEDGEGAVALRKVVK 291



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +++  N I   G TAL++A + N  L  L L  N I+ +GA  +  AL +  SL  
Sbjct: 68  TLQTLDLASNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNTSLQY 127

Query: 71  LNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           L         AGA+ +A+ L   NTTL+ ++L  N +   G   L   +     L+ + +
Sbjct: 128 LGFAFNGFGDAGATHLAEVLAGQNTTLKQLDLGFNGVCTDGARALACGLTKNHWLETLEL 187

Query: 130 SENQFGEEGVEEMEKLMKS 148
             N   + G  E+ + M++
Sbjct: 188 GYNGITDAGALELARAMRT 206



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 20/269 (7%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V++    I  +G   L D    N  +  L+L D  +   GA  + + L    +L  L+L 
Sbjct: 16  VDLNSERIGPLGAGQLGDLLAHNSTVDGLDLRDTILGAVGATHIARMLHTNTTLQTLDLA 75

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              ++  GA+++A+ +  N TL  + L  N IS +G   +  A++  T L+ +  + N F
Sbjct: 76  SNAIEDRGATALAEAIKVNNTLVKLELQRNGISSEGARYIADALRQNTSLQYLGFAFNGF 135

Query: 135 GEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSN 194
           G+ G   + +++         +     G C+D                G  +       N
Sbjct: 136 GDAGATHLAEVLAGQNTTLKQLDLGFNGVCTD----------------GARALACGLTKN 179

Query: 195 HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
           H        +N    +   + +   +++T   L  L +  N     G   LA+ LR +C 
Sbjct: 180 HWLETLELGYNGITDA--GALELARAMRTNTVLTSLGVPSNGISDAGAAELANALRDNCT 237

Query: 255 FALEELKLNNNGLGITGCKLLSKALHDCY 283
             L ++ L++N +G  G K L+  L+  Y
Sbjct: 238 --LVQVGLSSNSIGNKGAKELADVLNMNY 264



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 1/133 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T++ +++    +  VG T ++     N  L+ L+L  N I  +GA  L +A+    +L  
Sbjct: 40  TVDGLDLRDTILGAVGATHIARMLHTNTTLQTLDLASNAIEDRGATALAEAIKVNNTLVK 99

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINV 129
           L L    + S GA  IA  L  NT+L+ +    N     G   L + +  + T LKQ+++
Sbjct: 100 LELQRNGISSEGARYIADALRQNTSLQYLGFAFNGFGDAGATHLAEVLAGQNTTLKQLDL 159

Query: 130 SENQFGEEGVEEM 142
             N    +G   +
Sbjct: 160 GFNGVCTDGARAL 172


>gi|302773037|ref|XP_002969936.1| hypothetical protein SELMODRAFT_93050 [Selaginella moellendorffii]
 gi|300162447|gb|EFJ29060.1| hypothetical protein SELMODRAFT_93050 [Selaginella moellendorffii]
          Length = 475

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 187/446 (41%), Gaps = 33/446 (7%)

Query: 7   KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+L+T    +M        GI  LS +   NK L + + + N IT  G+  + + L    
Sbjct: 36  KELQTFPEADMSGRKFGDEGIKILSSSLGYNKSLEYADFSANNITAVGSSEMRKYLRANS 95

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            L  LN+    +   GA  +  +L  N TLE + L    IS +G   L  A+K+   L  
Sbjct: 96  HLKTLNMSGNPIGDDGAGVLCDFLFTNGTLEKLQLNSCNISDEGAKLLANALKSNQTLVV 155

Query: 127 INVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           + ++ N     G   + + +        + L  + G         +  E+N    E    
Sbjct: 156 LELNNNTIDYPGFAAIAEALIVNKTIRGVHLNGNYGGALGALALAKGLEQNKILRE---- 211

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLA 246
                   H H      +   N+   T  +   S K  A+L  LD+ +N+ GP GV  +A
Sbjct: 212 -------IHLH-----GNGMGNEGIRTLMEGLASSK--AKLSSLDIGNNSIGPKGVYYVA 257

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
           + ++ S   +++ L L  N +G  G + +++AL       K+  +   + +   G N + 
Sbjct: 258 EYMKKSK--SIQWLNLYMNDIGDEGAEKIAEAL-------KRNKTISTIDI---GGNNIT 305

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
             GA  +A   K   T+  +EM  N I   G   L+D  + N N++ L L    I  KGA
Sbjct: 306 AAGATHIANALKDNSTITSLEMSYNPIGGDGAKILADTLKHNGNVQTLRLGWCQIGVKGA 365

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDL 425
               + L    +++ L+L    L   GA+ +A+ L   N TL  ++L  NEI   G   L
Sbjct: 366 AAFAECLQYNSTMSTLDLRANGLGDEGAAILARSLKVVNETLTSLDLGFNEIRDNGAFAL 425

Query: 426 VKAMKNKT--KLKQINVSENQFGEEG 449
            +A+KN     +  +N+  N F + G
Sbjct: 426 AQALKNNVDAAVTTLNLMNNFFTKYG 451



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 114/234 (48%), Gaps = 14/234 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L E+ L  N  G  G+  L + L SS    L  L + NN +G        K ++   E  
Sbjct: 209 LREIHLHGNGMGNEGIRTLMEGLASSKA-KLSSLDIGNNSIG-------PKGVYYVAEYM 260

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           KK  S   L +++   N + +EGA+ +A   K+ KT+  +++  N I   G T +++A +
Sbjct: 261 KKSKSIQWLNLYM---NDIGDEGAEKIAEALKRNKTISTIDIGGNNITAAGATHIANALK 317

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
           +N  +  L ++ N I   GA  L   L    ++  L LG C +   GA++ A+ L  N+T
Sbjct: 318 DNSTITSLEMSYNPIGGDGAKILADTLKHNGNVQTLRLGWCQIGVKGAAAFAECLQYNST 377

Query: 407 LEDVNLTCNEISVQGGLDLVKAMK--NKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +  ++L  N +  +G   L +++K  N+T L  +++  N+  + G   + + +K
Sbjct: 378 MSTLDLRANGLGDEGAAILARSLKVVNET-LTSLDLGFNEIRDNGAFALAQALK 430



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 169/368 (45%), Gaps = 39/368 (10%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE +++    I   G   L++A + N+ L  L LN+NTI Y G   + +AL    ++  
Sbjct: 124 TLEKLQLNSCNISDEGAKLLANALKSNQTLVVLELNNNTIDYPGFAAIAEALIVNKTIRG 183

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINV 129
           ++L      + GA ++AK L  N  L +++L  N +  +G   L++ +  +K KL  +++
Sbjct: 184 VHLNGNYGGALGALALAKGLEQNKILREIHLHGNGMGNEGIRTLMEGLASSKAKLSSLDI 243

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD--NSN 187
             N  G +GV  + + MK       L L  ++      E+  E+ + N + +  D   +N
Sbjct: 244 GNNSIGPKGVYYVAEYMKKSKSIQWLNLYMNDIGDEGAEKIAEALKRNKTISTIDIGGNN 303

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
           ++   + H  NA                     LK  + +  L++S N  G  G + LAD
Sbjct: 304 ITAAGATHIANA---------------------LKDNSTITSLEMSYNPIGGDGAKILAD 342

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
            L+ +    ++ L+L    +G+ G    ++ L   Y S+    S L L+      N L +
Sbjct: 343 TLKHNG--NVQTLRLGWCQIGVKGAAAFAECLQ--YNSTM---STLDLRA-----NGLGD 390

Query: 308 EGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--LRHLNLNDNTITYK 364
           EGA +LA   K + +TL  +++  N I   G  AL+ A + N +  +  LNL +N  T  
Sbjct: 391 EGAAILARSLKVVNETLTSLDLGFNEIRDNGAFALAQALKNNVDAAVTTLNLMNNFFTKY 450

Query: 365 GAIPLGQA 372
           G + L +A
Sbjct: 451 GKVALTEA 458



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 3/148 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ KT+  +++  N I   G T +++A ++N  +  L ++ N I   GA  L   
Sbjct: 284 IAEALKRNKTISTIDIGGNNITAAGATHIANALKDNSTITSLEMSYNPIGGDGAKILADT 343

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-- 119
           L    ++  L LG C +   GA++ A+ L  N+T+  ++L  N +  +G   L +++K  
Sbjct: 344 LKHNGNVQTLRLGWCQIGVKGAAAFAECLQYNSTMSTLDLRANGLGDEGAAILARSLKVV 403

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
           N+T L  +++  N+  + G   + + +K
Sbjct: 404 NET-LTSLDLGFNEIRDNGAFALAQALK 430



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 69/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   KK K+++ + +  N I   G   +++A + NK +  +++  N IT  GA  +  A
Sbjct: 256 VAEYMKKSKSIQWLNLYMNDIGDEGAEKIAEALKRNKTISTIDIGGNNITAAGATHIANA 315

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L +    +   GA  +A  L  N  ++ + L   +I V+G     + ++  
Sbjct: 316 LKDNSTITSLEMSYNPIGGDGAKILADTLKHNGNVQTLRLGWCQIGVKGAAAFAECLQYN 375

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + +  +++  N  G+EG   + + +K
Sbjct: 376 STMSTLDLRANGLGDEGAAILARSLK 401



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 17/233 (7%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCF--ALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           E D+S   FG  G++    +L SS  +  +LE    + N +   G   + K L       
Sbjct: 43  EADMSGRKFGDEGIK----ILSSSLGYNKSLEYADFSANNITAVGSSEMRKYLR------ 92

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
               +   LK      N + ++GA +L        TLE++++    I   G   L++A +
Sbjct: 93  ----ANSHLKTLNMSGNPIGDDGAGVLCDFLFTNGTLEKLQLNSCNISDEGAKLLANALK 148

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N+ L  L LN+NTI Y G   + +AL    ++  ++L      + GA ++AK L  N  
Sbjct: 149 SNQTLVVLELNNNTIDYPGFAAIAEALIVNKTIRGVHLNGNYGGALGALALAKGLEQNKI 208

Query: 407 LEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +++L  N +  +G   L++ +  +K KL  +++  N  G +GV  + + MK
Sbjct: 209 LREIHLHGNGMGNEGIRTLMEGLASSKAKLSSLDIGNNSIGPKGVYYVAEYMK 261



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%)

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
           K+L+T    +M        GI  LS +   NK+L + + + N IT  G+  + + L    
Sbjct: 36  KELQTFPEADMSGRKFGDEGIKILSSSLGYNKSLEYADFSANNITAVGSSEMRKYLRANS 95

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
            L  LN+    +   GA  +  +L  N TLE + L    IS +G   L  A+K+   L  
Sbjct: 96  HLKTLNMSGNPIGDDGAGVLCDFLFTNGTLEKLQLNSCNISDEGAKLLANALKSNQTLVV 155

Query: 438 INVSENQFGEEGV 450
           + ++ N     G 
Sbjct: 156 LELNNNTIDYPGF 168


>gi|258678027|gb|ACV87735.1| chloroplast envelope protein 1 [Nicotiana benthamiana]
          Length = 614

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 189/419 (45%), Gaps = 47/419 (11%)

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           +L S +I+++      + G   +A+ L  N T E+VN   N I+ +G       +++   
Sbjct: 177 ELRSFSIVDMSGRNFGNDGLIFLAESLAYNQTAEEVNFAANGITAEGLKAFDGILQSNIA 236

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           LK +N+S N  G+EG + + +           +L ++ G    ++    S    D  A+ 
Sbjct: 237 LKTLNLSGNAIGDEGAKCLCE-----------ILANNSG---IQKLQLNSTGLGDEGAKA 282

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
               L  N +      +N   + S  S         SL     L  L L+ N  GP+G  
Sbjct: 283 IGEMLKTNSTLRVVELNNNQIDYSGFSGLAG-----SLLENKSLQSLHLNGNYGGPLGAA 337

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLL----------------------SKALHD 281
            LA  L  +   +L EL L  N +G  G + L                      ++  + 
Sbjct: 338 ALAKGLEGNK--SLRELYLQGNSIGDEGVRALISGLSSRKGKLVLLDMANNSITARGAYH 395

Query: 282 CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
             E +KK  S L L +++   N +++EGA+ +A   K+ +++  +++  N I+  GI+AL
Sbjct: 396 VAEYAKKSKSLLWLNLYM---NDIKDEGAEKIAEALKENRSITNIDLGGNDIHAKGISAL 452

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           ++  ++N  +  L L  N I  +GA  L + L    ++  L LG C + + GA +IA  L
Sbjct: 453 AEVLKDNSVITSLELGYNPIGPEGAKALAEVLKFHGNVKDLMLGWCQIGAKGAEAIADML 512

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 459
             N+T+ +++L  N +  +G + L +++K   + L  +N+  N+  +EG   + + +K+
Sbjct: 513 KYNSTISNLDLRANGLRDEGAICLARSLKVVNEALTTLNLGFNEIRDEGAFSIAQALKA 571



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 178/422 (42%), Gaps = 33/422 (7%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +T E V    NGI   G+ A     + N  L+ LNL+ N I  +GA  L + L+    + 
Sbjct: 207 QTAEEVNFAANGITAEGLKAFDGILQSNIALKTLNLSGNAIGDEGAKCLCEILANNSGIQ 266

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L    L   GA +I + L  N+TL  V L  N+I   G   L  ++     L+ +++
Sbjct: 267 KLQLNSTGLGDEGAKAIGEMLKTNSTLRVVELNNNQIDYSGFSGLAGSLLENKSLQSLHL 326

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N  G  G   + K +              EG  S  E   +     D   EG  + +S
Sbjct: 327 NGNYGGPLGAAALAKGL--------------EGNKSLRELYLQGNSIGD---EGVRALIS 369

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
              S           NNS  +    + +  + K+ + L+ L+L  N     G E +A+ L
Sbjct: 370 GLSSRKGKLVLLDMANNSITARGAYHVAEYAKKSKS-LLWLNLYMNDIKDEGAEKIAEAL 428

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           + +   ++  + L  N +   G   L++ L D    +  E           G N +  EG
Sbjct: 429 KENR--SITNIDLGGNDIHAKGISALAEVLKDNSVITSLE----------LGYNPIGPEG 476

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           AK LA V K    ++ + +    I   G  A++D  + N  + +L+L  N +  +GAI L
Sbjct: 477 AKALAEVLKFHGNVKDLMLGWCQIGAKGAEAIADMLKYNSTISNLDLRANGLRDEGAICL 536

Query: 370 GQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEISVQGGLDLV 426
            ++L  +  +L  LNLG   ++  GA SIA+ L  N    L  +NLT N ++  G   L 
Sbjct: 537 ARSLKVVNEALTTLNLGFNEIRDEGAFSIAQALKANEDVRLTSINLTSNFLTKLGQTALT 596

Query: 427 KA 428
            A
Sbjct: 597 DA 598



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 47/282 (16%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS+++LKT      L+LS NA G  G + L ++L ++    +++L+LN+ GLG  G K +
Sbjct: 232 QSNIALKT------LNLSGNAIGDEGAKCLCEILANNS--GIQKLQLNSTGLGDEGAKAI 283

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
            + L           +   L+V     N+++  G   LA    + K+L+ + +  N    
Sbjct: 284 GEMLK----------TNSTLRVVELNNNQIDYSGFSGLAGSLLENKSLQSLHLNGNYGGP 333

Query: 336 VGITALSDAFEENKNLRHLNLN-----------------------------DNTITYKGA 366
           +G  AL+   E NK+LR L L                              +N+IT +GA
Sbjct: 334 LGAAALAKGLEGNKSLRELYLQGNSIGDEGVRALISGLSSRKGKLVLLDMANNSITARGA 393

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + +   K  SL  LNL    +K  GA  IA+ L +N ++ +++L  N+I  +G   L 
Sbjct: 394 YHVAEYAKKSKSLLWLNLYMNDIKDEGAEKIAEALKENRSITNIDLGGNDIHAKGISALA 453

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
           + +K+ + +  + +  N  G EG + + +++K  G    L+L
Sbjct: 454 EVLKDNSVITSLELGYNPIGPEGAKALAEVLKFHGNVKDLML 495



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ +++ ++++  N I+  GI+AL++  ++N  +  L L  N I  +GA  L + 
Sbjct: 424 IAEALKENRSITNIDLGGNDIHAKGISALAEVLKDNSVITSLELGYNPIGPEGAKALAEV 483

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L LG C + + GA +IA  L  N+T+ +++L  N +  +G + L +++K  
Sbjct: 484 LKFHGNVKDLMLGWCQIGAKGAEAIADMLKYNSTISNLDLRANGLRDEGAICLARSLKVV 543

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKS 148
            + L  +N+  N+  +EG   + + +K+
Sbjct: 544 NEALTTLNLGFNEIRDEGAFSIAQALKA 571


>gi|14993576|gb|AAK76360.1|AF272150_1 deliriumA [Dictyostelium discoideum]
          Length = 817

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 211/464 (45%), Gaps = 65/464 (14%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +  +  K  T+  +E+ QNGI +     + +    NK + HLNL+ N+I          
Sbjct: 371 FVRMLLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSI---------- 420

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
                              + GA  I+K +  NTTL +++L+ N I ++G   L +A+++
Sbjct: 421 ------------------GNEGAEEISKAILVNTTLINLDLSQNCIGLKGSKALGQALQS 462

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
            T L+ IN+S+N+FG +G++    +++S G  ++L     E + S  + +E+S +    +
Sbjct: 463 TTILQTINLSKNRFGAKGIDF---IVESIGKNSSLT----EVDFSKNDLNEKSSKY-VGE 514

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFG 238
           A   +  L+             S N  +   +  +  ++S  ++    +  LD+S N F 
Sbjct: 515 AIRKHPCLA-------------SVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNEFN 561

Query: 239 PIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF 298
             G++ LA  L  S C ++  L L  + +G  G   L  AL        +  S + L + 
Sbjct: 562 YKGLKPLAAAL--SMCQSITYLDLTGDSIGDKGAVQLGDAL-------AQNHSIINLSLA 612

Query: 299 IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG-IYHVGITALSDAFEENKNLRHLNLN 357
               N +   GA  L    K  ++LE +++  N  I H+G   +++    NK +  L++ 
Sbjct: 613 F---NNIGASGATSLGNALKTNRSLEILDLSINPEIGHLGAIHIAEGLAMNKKISKLSMC 669

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N +   GA  LG+AL +  ++  L L    +   G  +++  L  N ++ ++NL+ N I
Sbjct: 670 TNGLGPIGAKRLGEALRQNSTITDLQLRGNEIGDEGCRALSDSLKQNQSITELNLSGNGI 729

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSF 460
           +  G   L +A+     L  I ++ N    +GV+ M E L++S+
Sbjct: 730 TNDGAKALCEALWYNQSLASIQLNHNNINTQGVQFMKELLLRSY 773



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 150/377 (39%), Gaps = 32/377 (8%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           +S +   LT NTT+  + L+ N I  +    + + +     +  +N+S N  G EG EE+
Sbjct: 369 SSFVRMLLTKNTTITTLELSQNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEI 428

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
            K +    +   L+  D    C   +  +   +   S       NLS N       A   
Sbjct: 429 SKAIL---VNTTLINLDLSQNCIGLKGSKALGQALQSTTILQTINLSKN----RFGAKGI 481

Query: 203 SHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKL 262
                +   N+S            L E+D S N       + + + +R   C A   + L
Sbjct: 482 DFIVESIGKNSS------------LTEVDFSKNDLNEKSSKYVGEAIRKHPCLA--SVNL 527

Query: 263 NNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
            +  L     K +S+ +           +   +      RN    +G K LAA     ++
Sbjct: 528 CDTKLSPESMKYISEGIQ----------ASQTIAYLDMSRNEFNYKGLKPLAAALSMCQS 577

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           +  +++  + I   G   L DA  +N ++ +L+L  N I   GA  LG AL    SL IL
Sbjct: 578 ITYLDLTGDSIGDKGAVQLGDALAQNHSIINLSLAFNNIGASGATSLGNALKTNRSLEIL 637

Query: 383 NLG-DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           +L  +  +   GA  IA+ L  N  +  +++  N +   G   L +A++  + +  + + 
Sbjct: 638 DLSINPEIGHLGAIHIAEGLAMNKKISKLSMCTNGLGPIGAKRLGEALRQNSTITDLQLR 697

Query: 442 ENQFGEEGVEEMEKLMK 458
            N+ G+EG   +   +K
Sbjct: 698 GNEIGDEGCRALSDSLK 714



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 82/171 (47%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N + N+ A  +       KT+  + +  N I + G   +S A   N  L +L+L+ N I
Sbjct: 389 QNGIGNKAAHCIGECLLANKTITHLNLSFNSIGNEGAEEISKAILVNTTLINLDLSQNCI 448

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             KG+  LGQAL     L  +NL      + G   I + +  N++L +V+ + N+++ + 
Sbjct: 449 GLKGSKALGQALQSTTILQTINLSKNRFGAKGIDFIVESIGKNSSLTEVDFSKNDLNEKS 508

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
              + +A++    L  +N+ + +   E ++ + + +++    A L +  +E
Sbjct: 509 SKYVGEAIRKHPCLASVNLCDTKLSPESMKYISEGIQASQTIAYLDMSRNE 559


>gi|412985803|emb|CCO17003.1| predicted protein [Bathycoccus prasinos]
          Length = 772

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 178/463 (38%), Gaps = 106/463 (22%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +T   V+   NG     + A+++A  +NKKLR ++   N +   G I L   L     + 
Sbjct: 364 ETASCVDFGANGFGETAMLAITEAMSQNKKLRMVSFASNPLLDVGVIALANYLKTDTKIT 423

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            LN+  C     GA ++A+ L  NT++  + +  N I  +G   L +A+     L+ +++
Sbjct: 424 TLNINSCSFGDDGAKALAEALKSNTSITSLEMNNNAIDYEGSTALAQALAQNDTLEHVSL 483

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
             N  G  G         +  +A ALV                           DNS+L 
Sbjct: 484 QGNYVGALG---------TVALANALV---------------------------DNSSLK 507

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSL-----KTGARLVELDLSDNAFGPIGVEG 244
               N                ++  N+  + L     K   +L  LD+ +NA GP     
Sbjct: 508 SLTLN---------------GNDIGNEGCVKLCEALSKRKTKLTNLDIGNNAIGPDSGAA 552

Query: 245 LADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNR 304
           L D L+     AL  L L  N L   G   +S AL D                       
Sbjct: 553 LCDYLKDDD--ALTHLNLYMNELSDDGAVKMSPALKDN---------------------- 588

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
                            TL+ +++  N I  +G  ALS + +EN  L  L L  N I   
Sbjct: 589 ----------------ATLKNLDIGGNNIGALGAMALSKSLKENTALTTLELGYNPIGKD 632

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G I L ++L     +  L +G C +   GA+++A  +T N +L  ++L  NE+   G   
Sbjct: 633 GGIALAESLKFHAKIETLRVGWCKIGKEGAAALADTITYNESLTTLDLRGNELGDDGVRS 692

Query: 425 LVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
           L K++    + L  +++  N+  +EG         +F +AAA+
Sbjct: 693 LGKSLAVVNEHLSTLDLGYNEIKDEG---------AFALAAAI 726



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA    +  TLEHV +  N +  +G  AL++A  +N  L+ L LN N I  +G + L +A
Sbjct: 468 LAQALAQNDTLEHVSLQGNYVGALGTVALANALVDNSSLKSLTLNGNDIGNEGCVKLCEA 527

Query: 62  LSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK  + L  L++G+  +     +++  YL D+  L  +NL  NE+S  G + +  A+K+
Sbjct: 528 LSKRKTKLTNLDIGNNAIGPDSGAALCDYLKDDDALTHLNLYMNELSDDGAVKMSPALKD 587

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
              LK +++  N  G  G   + K +K
Sbjct: 588 NATLKNLDIGGNNIGALGAMALSKSLK 614



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 103/463 (22%), Positives = 181/463 (39%), Gaps = 103/463 (22%)

Query: 32  DAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 91
           D  +E ++ + ++LN   +   GA  + + ++   + + ++ G          +I + ++
Sbjct: 330 DCVDELRRFQTVDLNGRKLGDDGAKIIAEGIAFNETASCVDFGANGFGETAMLAITEAMS 389

Query: 92  DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
            N  L  V+   N +   G + L   +K  TK+  +N++   FG++G + + + +KS   
Sbjct: 390 QNKKLRMVSFASNPLLDVGVIALANYLKTDTKITTLNINSCSFGDDGAKALAEALKSNTS 449

Query: 152 AAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS---NLSHNDSNHSHNASNQSHNNSN 208
             +L + +                 N  D EG  +    L+ ND+               
Sbjct: 450 ITSLEMNN-----------------NAIDYEGSTALAQALAQNDT--------------- 477

Query: 209 QSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
                    H+SL+            N  G +G   LA+ L  +   +L+ L LN N +G
Sbjct: 478 -------LEHVSLQ-----------GNYVGALGTVALANALVDNS--SLKSLTLNGNDIG 517

Query: 269 ITGCKLLSKALH---------DCYESSKKEGSPLALKVFIAG----------RNRLENEG 309
             GC  L +AL          D   ++    S  AL  ++             N L ++G
Sbjct: 518 NEGCVKLCEALSKRKTKLTNLDIGNNAIGPDSGAALCDYLKDDDALTHLNLYMNELSDDG 577

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           A  ++   K   TL+ +++  N I  +G  ALS + +EN  L  L L  N I   G I L
Sbjct: 578 AVKMSPALKDNATLKNLDIGGNNIGALGAMALSKSLKENTALTTLELGYNPIGKDGGIAL 637

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN---TTLE------------------ 408
            ++L     +  L +G C +   GA+++A  +T N   TTL+                  
Sbjct: 638 AESLKFHAKIETLRVGWCKIGKEGAAALADTITYNESLTTLDLRGNELGDDGVRSLGKSL 697

Query: 409 --------DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
                    ++L  NEI  +G   L  A+KN  +    NVS N
Sbjct: 698 AVVNEHLSTLDLGYNEIKDEGAFALAAAIKNNAEGALENVSVN 740



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 1/150 (0%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           GR +L ++GAK++A      +T   V+   NG     + A+++A  +NK LR ++   N 
Sbjct: 345 GR-KLGDDGAKIIAEGIAFNETASCVDFGANGFGETAMLAITEAMSQNKKLRMVSFASNP 403

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           +   G I L   L     +  LN+  C     GA ++A+ L  NT++  + +  N I  +
Sbjct: 404 LLDVGVIALANYLKTDTKITTLNINSCSFGDDGAKALAEALKSNTSITSLEMNNNAIDYE 463

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           G   L +A+     L+ +++  N  G  G 
Sbjct: 464 GSTALAQALAQNDTLEHVSLQGNYVGALGT 493



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+ K+   L ++++  N I      AL D  +++  L HLNL  N ++  GA+ +  AL 
Sbjct: 527 ALSKRKTKLTNLDIGNNAIGPDSGAALCDYLKDDDALTHLNLYMNELSDDGAVKMSPALK 586

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
              +L  L++G   + + GA +++K L +NT L  + L  N I   GG+ L +++K   K
Sbjct: 587 DNATLKNLDIGGNNIGALGAMALSKSLKENTALTTLELGYNPIGKDGGIALAESLKFHAK 646

Query: 124 LKQINVSENQFGEEGVEEM 142
           ++ + V   + G+EG   +
Sbjct: 647 IETLRVGWCKIGKEGAAAL 665



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++   K   TL+++++  N I  +G  ALS + +EN  L  L L  N I   G I L ++
Sbjct: 581 MSPALKDNATLKNLDIGGNNIGALGAMALSKSLKENTALTTLELGYNPIGKDGGIALAES 640

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     +  L +G C +   GA+++A  +T N +L  ++L  NE+   G   L K++   
Sbjct: 641 LKFHAKIETLRVGWCKIGKEGAAALADTITYNESLTTLDLRGNELGDDGVRSLGKSLAVV 700

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
            + L  +++  N+  +EG         +F +AAA+
Sbjct: 701 NEHLSTLDLGYNEIKDEG---------AFALAAAI 726


>gi|224108087|ref|XP_002314715.1| predicted protein [Populus trichocarpa]
 gi|222863755|gb|EEF00886.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 17/238 (7%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LS+NA G  GV     LLRS  C  LEEL L NNG+     + + + +    
Sbjct: 214 GSILKSLNLSNNALGEKGVRAFGALLRSQSC--LEELYLMNNGISEEAAEAVCELI---- 267

Query: 284 ESSKKEGSPLA--LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
                   PL   L+V     N   ++GA  ++ V K+   LE        +   G  AL
Sbjct: 268 --------PLTEKLRVLQFHNNMTGDKGALAISKVVKRSPLLEDFRCSSTRVGSEGGVAL 319

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           S+A +   +L+ L+L DN    +  + L +ALSK   L  + L    L+  GA +IA+ L
Sbjct: 320 SEALDTCTHLKKLDLRDNMFGVEAGVALSKALSKYAGLTEVYLSYLNLEDEGAMAIARAL 379

Query: 402 TDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            ++  +LE +++  N+I+ +    +   +  K  L ++N++EN+  +EG  ++ K+++
Sbjct: 380 KESAPSLEVLDIAGNDITAEAAPIVAACIAEKQHLTKLNLAENELKDEGAIQISKVLE 437



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 76/147 (51%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ V K+   LE        +   G  ALS+A +    L+ L+L DN    +  + L +A
Sbjct: 291 ISKVVKRSPLLEDFRCSSTRVGSEGGVALSEALDTCTHLKKLDLRDNMFGVEAGVALSKA 350

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK   L  + L    L+  GA +IA+ L ++  +LE +++  N+I+ +    +   +  
Sbjct: 351 LSKYAGLTEVYLSYLNLEDEGAMAIARALKESAPSLEVLDIAGNDITAEAAPIVAACIAE 410

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++N++EN+  +EG  ++ K+++
Sbjct: 411 KQHLTKLNLAENELKDEGAIQISKVLE 437



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A++ A +E+   L  L++  N IT + A  +   +++   L  LNL +  LK  GA 
Sbjct: 371 GAMAIARALKESAPSLEVLDIAGNDITAEAAPIVAACIAEKQHLTKLNLAENELKDEGAI 430

Query: 85  SIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            I+K L + +  L++V+++ N I   G   L + +  K + K +N+  N   +EG++E++
Sbjct: 431 QISKVLEEGHLQLKEVDMSINSIRRAGARVLARVVVQKPEFKFLNIDGNFISDEGIDEVK 490

Query: 144 KLMKSF 149
           ++ + F
Sbjct: 491 EMFEKF 496



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 5/202 (2%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            +N   G+   ++    L     S K +   + L  FIAGR   E      + +   +  
Sbjct: 160 FSNRSFGLEAARVAEPILA----SIKNQLKEVDLSDFIAGRPEAEALEVMNIFSTALEGS 215

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            L+ + +  N +   G+ A          L  L L +N I+ + A  + + +     L +
Sbjct: 216 ILKSLNLSNNALGEKGVRAFGALLRSQSCLEELYLMNNGISEEAAEAVCELIPLTEKLRV 275

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L   + +    GA +I+K +  +  LED   +   +  +GG+ L +A+   T LK++++ 
Sbjct: 276 LQFHNNMTGDKGALAISKVVKRSPLLEDFRCSSTRVGSEGGVALSEALDTCTHLKKLDLR 335

Query: 442 ENQFG-EEGVEEMEKLMKSFGM 462
           +N FG E GV   + L K  G+
Sbjct: 336 DNMFGVEAGVALSKALSKYAGL 357



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 66/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             A+ +    LE + +  NGI      A+ +     +KLR L  ++N    KGA+ + + 
Sbjct: 235 FGALLRSQSCLEELYLMNNGISEEAAEAVCELIPLTEKLRVLQFHNNMTGDKGALAISKV 294

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P L         + S G  ++++ L   T L+ ++L  N   V+ G+ L KA+   
Sbjct: 295 VKRSPLLEDFRCSSTRVGSEGGVALSEALDTCTHLKKLDLRDNMFGVEAGVALSKALSKY 354

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++ +S     +EG   + + +K
Sbjct: 355 AGLTEVYLSYLNLEDEGAMAIARALK 380



 Score = 45.1 bits (105), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 1/141 (0%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A          L  L L +N I+ + A  + + +     L +L
Sbjct: 217 LKSLNLSNNALGEKGVRAFGALLRSQSCLEELYLMNNGISEEAAEAVCELIPLTEKLRVL 276

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
              + +    GA +I+K +  +  LED   +   +  +GG+ L +A+   T LK++++ +
Sbjct: 277 QFHNNMTGDKGALAISKVVKRSPLLEDFRCSSTRVGSEGGVALSEALDTCTHLKKLDLRD 336

Query: 132 NQFG-EEGVEEMEKLMKSFGM 151
           N FG E GV   + L K  G+
Sbjct: 337 NMFGVEAGVALSKALSKYAGL 357


>gi|452819047|gb|EME26151.1| FBox-LRR protein [Galdieria sulphuraria]
          Length = 667

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L ELD+  N     GV+ L++ L+ +    L EL +NNN +   G + LS+AL
Sbjct: 19  ALKVNNTLTELDIRSNKIALEGVQYLSEALKVN--NTLTELDINNNNIASEGVQYLSEAL 76

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +   L +   G N + +EG + L+   K   TL  +++  N I   G+ 
Sbjct: 77  -------KVNNTLTKLDI---GYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQ 126

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            LS+A + N  L  L++N+N I  +G   L +AL    +L  L++G   + S G   +++
Sbjct: 127 YLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSE 186

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N TL ++++  N+I+++G   L +A+K    L ++++  N    EGV+ + + +K
Sbjct: 187 ALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTKLDIGYNNVDSEGVQYLSEALK 245



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 165/374 (44%), Gaps = 59/374 (15%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           + S G   +++ L  N TL ++++  N+I+++G   L +A+K    L +++++ N    E
Sbjct: 8   ISSEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASE 67

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           GV+ +                                    S+A   N+ L+  D  +++
Sbjct: 68  GVQYL------------------------------------SEALKVNNTLTKLDIGYNN 91

Query: 198 NASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
            AS      S            +LK    L ELD+  N     GV+ L++ L+ +    L
Sbjct: 92  VASEGVQYLSE-----------ALKVNNTLTELDIRSNKIALEGVQYLSEALKVN--NTL 138

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
            EL +NNN +   G + LS+AL       K   +   L +   G N + +EG + L+   
Sbjct: 139 TELDINNNNIASEGVQYLSEAL-------KVNNTLTKLDI---GYNNVASEGVQYLSEAL 188

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
           K   TL  +++  N I   G+  LS+A + N  L  L++  N +  +G   L +AL    
Sbjct: 189 KVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTKLDIGYNNVDSEGVQYLSEALKVNN 248

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
           +L  L++G   + S G   +++ L  N TL  +N+ CN ++ +G   L +A+K    L +
Sbjct: 249 TLTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIVCNNVASEGAQYLSEALKVNNTLTE 308

Query: 438 INVSENQFGEEGVE 451
           +++S N    E + 
Sbjct: 309 LDISGNAIPSEDIR 322



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 59/348 (16%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  LS+A + N  L  L++  N I  +G   L +AL    +L  L++ +  + S G   
Sbjct: 12  GVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASEGVQY 71

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +++ L  N TL  +++  N ++ +G   L +A+K    L ++++  N+   EGV+ + + 
Sbjct: 72  LSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEA 131

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
           +K                                     N+ L+  D N+++ AS     
Sbjct: 132 LKV------------------------------------NNTLTELDINNNNIASEGVQY 155

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
            S            +LK    L +LD+  N     GV+ L++ L+ +    L EL + +N
Sbjct: 156 LSE-----------ALKVNNTLTKLDIGYNNVASEGVQYLSEALKVN--NTLTELDIRSN 202

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
            + + G + LS+AL       K   +   L +   G N +++EG + L+   K   TL +
Sbjct: 203 KIALEGVQYLSEAL-------KVNNTLTKLDI---GYNNVDSEGVQYLSEALKVNNTLTK 252

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           +++  N I   G+  LS+A + N  L  LN+  N +  +GA  L +AL
Sbjct: 253 LDIGYNNIASEGVQYLSEALKVNNTLTKLNIVCNNVASEGAQYLSEAL 300



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L +LD+  N     GV+ L++ L+ +    L EL + +N + + G + LS+AL
Sbjct: 75  ALKVNNTLTKLDIGYNNVASEGVQYLSEALKVN--NTLTELDIRSNKIALEGVQYLSEAL 132

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +   L +     N + +EG + L+   K   TL ++++  N +   G+ 
Sbjct: 133 -------KVNNTLTELDI---NNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQ 182

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            LS+A + N  L  L++  N I  +G   L +AL    +L  L++G   + S G   +++
Sbjct: 183 YLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTKLDIGYNNVDSEGVQYLSE 242

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N TL  +++  N I+ +G   L +A+K    L ++N+  N    EG + + + +K
Sbjct: 243 ALKVNNTLTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIVCNNVASEGAQYLSEALK 301



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 84/154 (54%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           + +EG + L+   K   TL  +++  N I   G+  LS+A + N  L  L++N+N I  +
Sbjct: 8   ISSEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASE 67

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G   L +AL    +L  L++G   + S G   +++ L  N TL ++++  N+I+++G   
Sbjct: 68  GVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQY 127

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +A+K    L +++++ N    EGV+ + + +K
Sbjct: 128 LSEALKVNNTLTELDINNNNIASEGVQYLSEALK 161



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 79/146 (54%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   K   TL  +++  N I   G+  LS+A + N  L  L++N+N I  +G   L +A
Sbjct: 16  LSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEA 75

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L++G   + S G   +++ L  N TL ++++  N+I+++G   L +A+K  
Sbjct: 76  LKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVN 135

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L +++++ N    EGV+ + + +K
Sbjct: 136 NTLTELDINNNNIASEGVQYLSEALK 161



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 78/146 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   K   TL  +++  N I   G+  LS+A + N  L  L++N+N I  +G   L +A
Sbjct: 100 LSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEA 159

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L++G   + S G   +++ L  N TL ++++  N+I+++G   L +A+K  
Sbjct: 160 LKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVN 219

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++++  N    EGV+ + + +K
Sbjct: 220 NTLTKLDIGYNNVDSEGVQYLSEALK 245



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   K   TL  +++  N I   G+  LS+A + N  L  L++  N +  +G   L +A
Sbjct: 184 LSEALKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTKLDIGYNNVDSEGVQYLSEA 243

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L++G   + S G   +++ L  N TL  +N+ CN ++ +G   L +A+K  
Sbjct: 244 LKVNNTLTKLDIGYNNIASEGVQYLSEALKVNNTLTKLNIVCNNVASEGAQYLSEALKVN 303

Query: 122 TKLKQINVSENQFGEEGVE 140
             L ++++S N    E + 
Sbjct: 304 NTLTELDISGNAIPSEDIR 322



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   K   TL  +++  N +   G+  LS+A + N  L  L++  N I  +G   L +A
Sbjct: 156 LSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEA 215

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L++G   + S G   +++ L  N TL  +++  N I+ +G   L +A+K  
Sbjct: 216 LKVNNTLTKLDIGYNNVDSEGVQYLSEALKVNNTLTKLDIGYNNIASEGVQYLSEALKVN 275

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++N+  N    EG + + + +K
Sbjct: 276 NTLTKLNIVCNNVASEGAQYLSEALK 301



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 74/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   K   TL  +++  N +   G+  LS+A + N  L  L++  N I  +G   L +A
Sbjct: 72  LSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVNNTLTELDIRSNKIALEGVQYLSEA 131

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L++ +  + S G   +++ L  N TL  +++  N ++ +G   L +A+K  
Sbjct: 132 LKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEALKVN 191

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++++  N+   EGV+ + + +K
Sbjct: 192 NTLTELDIRSNKIALEGVQYLSEALK 217



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   K   TL  +++  N I   G+  LS+A + N  L  L++  N +  +G   L +A
Sbjct: 44  LSEALKVNNTLTELDINNNNIASEGVQYLSEALKVNNTLTKLDIGYNNVASEGVQYLSEA 103

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L++    +   G   +++ L  N TL ++++  N I+ +G   L +A+K  
Sbjct: 104 LKVNNTLTELDIRSNKIALEGVQYLSEALKVNNTLTELDINNNNIASEGVQYLSEALKVN 163

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++++  N    EGV+ + + +K
Sbjct: 164 NTLTKLDIGYNNVASEGVQYLSEALK 189


>gi|195621094|gb|ACG32377.1| ran GTPase activating protein [Zea mays]
          Length = 541

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L++SDNA G  GV   ++LL+S    +LEEL + N+G+        +KAL +  
Sbjct: 213 GSVLRYLNISDNALGEKGVRAFSELLKSQE--SLEELYVMNDGISEEA----AKALSELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +++K      LKV     N   +EGA  +A + K+   +E        I   G  ALS+
Sbjct: 267 PATEK------LKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN       + L + L KLP L  L L D  L++ G  +IAK L  
Sbjct: 321 ALGTCTRLKKLDLRDNLFGVDAGLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQ 380

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +   LE + +  NEI+ +   DL + +     LK++ ++EN+  + G
Sbjct: 381 SALQLEVLEIAGNEINAKAAPDLAECLAVMQSLKKLTLAENELKDNG 427



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 139/337 (41%), Gaps = 59/337 (17%)

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           L+ +N+S+N  GE+GV    +L+KS                  +E  EE    ND  +E 
Sbjct: 216 LRYLNISDNALGEKGVRAFSELLKS------------------QESLEELYVMNDGISEE 257

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
               LS              HNN          + M +K    +     S    G  G  
Sbjct: 258 AAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEM-VKRSPNVESFRCSATRIGSDGGV 316

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
            L++ L    C  L++L L +N  G+     LS+ L            P  ++++++  N
Sbjct: 317 ALSEAL--GTCTRLKKLDLRDNLFGVDAGLALSETLPKL---------PDLVELYLSDLN 365

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
            LEN+G   +A   K+                   +AL         L  L +  N I  
Sbjct: 366 -LENKGTIAIAKALKQ-------------------SAL--------QLEVLEIAGNEINA 397

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGG 422
           K A  L + L+ + SL  L L +  LK  GA  IAK L D ++ L++++++ N +   G 
Sbjct: 398 KAAPDLAECLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGA 457

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
               +A+ NK    Q+N++ N   +EGV+E+++++K+
Sbjct: 458 RCFARAVANKPDFVQLNINGNFISDEGVDEVKEILKA 494



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +E        I   G  ALS+A     +L+ L+L DN       + L + 
Sbjct: 290 IAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSET 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KLP L  L L D  L++ G  +IAK L  +   LE + +  NEI+ +   DL + +  
Sbjct: 350 LPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPDLAECLAV 409

Query: 121 KTKLKQINVSENQFGEEG 138
              LK++ ++EN+  + G
Sbjct: 410 MQSLKKLTLAENELKDNG 427



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A++ A +++  +L  L +  N I  K A  L +
Sbjct: 346 LSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPDLAE 405

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D ++ L++++++ N +   G     +A+ 
Sbjct: 406 CLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGARCFARAVA 465

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           NK    Q+N++ N   +EGV+E+++++K+
Sbjct: 466 NKPDFVQLNINGNFISDEGVDEVKEILKA 494



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL- 320
            +N   GI    +    L    ES K + + + +  F+AGR+  E+E   ++    K L 
Sbjct: 159 FSNRSFGIGAANVAGPIL----ESVKNQLTEVDISDFVAGRS--EDEALDVMRIFSKALD 212

Query: 321 -KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N +   G+ A S+  +  ++L  L + ++ I+ + A  L + +     L
Sbjct: 213 GSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKL 272

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK+++
Sbjct: 273 KVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLD 332

Query: 440 VSENQFG 446
           + +N FG
Sbjct: 333 LRDNLFG 339



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 61/125 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A S+  +  + L  L + ++ I+ + A  L + +     L +
Sbjct: 215 VLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKV 274

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 275 LHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLR 334

Query: 131 ENQFG 135
           +N FG
Sbjct: 335 DNLFG 339



 Score = 38.1 bits (87), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 69/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            + + K  ++LE + +  +GI      ALS+     +KL+ L+ ++N    +GA+ + + 
Sbjct: 234 FSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEM 293

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P++         + S G  ++++ L   T L+ ++L  N   V  GL L + +   
Sbjct: 294 VKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSETLPKL 353

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++ +S+     +G   + K +K
Sbjct: 354 PDLVELYLSDLNLENKGTIAIAKALK 379


>gi|212274827|ref|NP_001130411.1| uncharacterized protein LOC100191507 [Zea mays]
 gi|194689052|gb|ACF78610.1| unknown [Zea mays]
 gi|194702204|gb|ACF85186.1| unknown [Zea mays]
 gi|413923081|gb|AFW63013.1| putative RAN GTPase activating family protein [Zea mays]
          Length = 541

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L++SDNA G  GV   ++LL+S    +LEEL + N+G+        +KAL +  
Sbjct: 213 GSVLRYLNISDNALGEKGVRAFSELLKSQE--SLEELYVMNDGISEEA----AKALSELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +++K      LKV     N   +EGA  +A + K+   +E        I   G  ALS+
Sbjct: 267 PATEK------LKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN       + L + L KLP L  L L D  L++ G  +IAK L  
Sbjct: 321 ALGTCTRLKKLDLRDNLFGVDAGLALSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQ 380

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +   LE + +  NEI+ +   DL + +     LK++ ++EN+  + G
Sbjct: 381 SALQLEVLEIAGNEINAKAAPDLAECLAVMQSLKKLTLAENELKDNG 427



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 139/337 (41%), Gaps = 59/337 (17%)

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           L+ +N+S+N  GE+GV    +L+KS                  +E  EE    ND  +E 
Sbjct: 216 LRYLNISDNALGEKGVRAFSELLKS------------------QESLEELYVMNDGISEE 257

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
               LS              HNN          + M +K    +     S    G  G  
Sbjct: 258 AAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEM-VKRSPNVESFRCSATRIGSDGGV 316

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
            L++ L    C  L++L L +N  G+     LS+ L            P  ++++++  N
Sbjct: 317 ALSEAL--GTCTRLKKLDLRDNLFGVDAGLALSETLPKL---------PDLVELYLSDLN 365

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
            LEN+G   +A   K+                   +AL         L  L +  N I  
Sbjct: 366 -LENKGTIAIAKALKQ-------------------SAL--------QLEVLEIAGNEINA 397

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGG 422
           K A  L + L+ + SL  L L +  LK  GA  IAK L D ++ L++++++ N +   G 
Sbjct: 398 KAAPDLAECLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGA 457

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
               +A+ NK    Q+N++ N   +EGV+E+++++K+
Sbjct: 458 RCFTRAVANKPDFVQLNINGNFISDEGVDEVKEILKA 494



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +E        I   G  ALS+A     +L+ L+L DN       + L + 
Sbjct: 290 IAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSET 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L KLP L  L L D  L++ G  +IAK L  +   LE + +  NEI+ +   DL + +  
Sbjct: 350 LPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPDLAECLAV 409

Query: 121 KTKLKQINVSENQFGEEG 138
              LK++ ++EN+  + G
Sbjct: 410 MQSLKKLTLAENELKDNG 427



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A++ A +++  +L  L +  N I  K A  L +
Sbjct: 346 LSETLPKLPDLVELYLSDLNLENKGTIAIAKALKQSALQLEVLEIAGNEINAKAAPDLAE 405

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D ++ L++++++ N +   G     +A+ 
Sbjct: 406 CLAVMQSLKKLTLAENELKDNGAVIIAKSLEDGHSDLKELDVSTNMLQRVGARCFTRAVA 465

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           NK    Q+N++ N   +EGV+E+++++K+
Sbjct: 466 NKPDFVQLNINGNFISDEGVDEVKEILKA 494



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL- 320
            +N   GI    +    L    ES K + + + +  F+AGR+  E+E   ++    K L 
Sbjct: 159 FSNRSFGIGAANVAGPIL----ESVKNQLTEVDISDFVAGRS--EDEALDVMRIFSKALD 212

Query: 321 -KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N +   G+ A S+  +  ++L  L + ++ I+ + A  L + +     L
Sbjct: 213 GSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKL 272

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK+++
Sbjct: 273 KVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLD 332

Query: 440 VSENQFG 446
           + +N FG
Sbjct: 333 LRDNLFG 339



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 61/125 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A S+  +  + L  L + ++ I+ + A  L + +     L +
Sbjct: 215 VLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKV 274

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 275 LHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLR 334

Query: 131 ENQFG 135
           +N FG
Sbjct: 335 DNLFG 339


>gi|189502473|ref|YP_001958190.1| hypothetical protein Aasi_1120 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497914|gb|ACE06461.1| hypothetical protein Aasi_1120 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 781

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 193/451 (42%), Gaps = 69/451 (15%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           ++LN+N I+ +GA   G+ L    ++ ++NL +  + + GA   AK+L   T +  VNL+
Sbjct: 296 VDLNENQISDQGAEEFGKHLQG-TNVHMVNLSNNQIGAQGAEGFAKHL-KRTKVHAVNLS 353

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEG 162
            N I  QG  +  K +K +T++  +N+S N+ G +G EE  K ++               
Sbjct: 354 FNNIGNQGAEEFGKHLK-ETRVHTVNLSGNEIGNQGAEEFGKHLQ--------------- 397

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLK 222
           E      D    E +D  AEG   +L          A N S NN +         H+   
Sbjct: 398 ETQVHTVDLSGNEIDDQGAEGFTKHLQGTQVQ----AVNLSFNNISDQGAEGFAKHLKE- 452

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
              ++  ++LS N     G EG A  L+ +    ++   L+ N +G  G +   K L   
Sbjct: 453 --TKVHTVNLSYNQISDQGAEGFAKHLQETQVHTVD---LSGNQIGDQGIEEFGKHLQGT 507

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
                       +   +   N+++++GA+      K+ + +  V++ +N I   G    +
Sbjct: 508 -----------NVHTLVLSENQIDDQGAEEFGKHLKETR-VHTVDLSKNYIGDQGAEGFA 555

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
              +E + +  +NL+ N I  +GA+ L + L     +  +NL   ++ + GA  +AK+L 
Sbjct: 556 KYLKETQ-VHTVNLSGNQIGAEGAVGLAKNLQG-TQVHTVNLSGNVIGAQGAEGLAKHLQ 613

Query: 403 --------------------------DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
                                       T +  ++L+ N+I  QG     K ++  T++ 
Sbjct: 614 GTKVHTLHLAGNRIGAQCAEALAKHLQGTKVHTLHLSMNQIGAQGAEGFAKHLQG-TQVH 672

Query: 437 QINVSENQFGEEGVEEMEKLMKSFGMAAALV 467
            +++S NQ G++G E + K ++   M   ++
Sbjct: 673 TVDLSYNQIGDQGAEALAKHLQGTQMHTVIL 703



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 183/423 (43%), Gaps = 50/423 (11%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
           ++  +NL+ N I  +GA   G+ L +   +  ++L    +   GA    K+L   T ++ 
Sbjct: 373 RVHTVNLSGNEIGNQGAEEFGKHLQE-TQVHTVDLSGNEIDDQGAEGFTKHL-QGTQVQA 430

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           VNL+ N IS QG     K +K +TK+  +N+S NQ  ++G E   K ++   +       
Sbjct: 431 VNLSFNNISDQGAEGFAKHLK-ETKVHTVNLSYNQISDQGAEGFAKHLQETQVHTV---- 485

Query: 159 DDEGECSDEEQDEESEEENDSDAEGDNSN---LSHNDSNHSHNASNQSHNNSNQSHNTSN 215
               + S  +  ++  EE     +G N +   LS N  +         H           
Sbjct: 486 ----DLSGNQIGDQGIEEFGKHLQGTNVHTLVLSENQIDDQGAEEFGKH----------- 530

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
                LK   R+  +DLS N  G  G EG A  L+ +    +  + L+ N +G  G   L
Sbjct: 531 -----LKE-TRVHTVDLSKNYIGDQGAEGFAKYLKET---QVHTVNLSGNQIGAEGAVGL 581

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           +K L         +G+ +   V ++G N +  +GA+ LA   +  K +  + +  N I  
Sbjct: 582 AKNL---------QGTQVH-TVNLSG-NVIGAQGAEGLAKHLQGTK-VHTLHLAGNRIGA 629

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
               AL+   +  K +  L+L+ N I  +GA    + L     +  ++L    +   GA 
Sbjct: 630 QCAEALAKHLQGTK-VHTLHLSMNQIGAQGAEGFAKHLQG-TQVHTVDLSYNQIGDQGAE 687

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           ++AK+L   T +  V L  N I  QG  +  K ++  T++  +N+SEN    +G E   K
Sbjct: 688 ALAKHL-QGTQMHTVILAGNHIGAQGAEEFAKHLQG-TQVYTVNLSENHIDGQGAEGFAK 745

Query: 456 LMK 458
            +K
Sbjct: 746 HLK 748



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 19/235 (8%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  +  +DL++N     G E     L+ +    +    L+NN +G  G +  +K L    
Sbjct: 290 GTNVHTVDLNENQISDQGAEEFGKHLQGTNVHMV---NLSNNQIGAQGAEGFAKHL---- 342

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           + +K     L+        N + N+GA+      K+ + +  V +  N I + G      
Sbjct: 343 KRTKVHAVNLSF-------NNIGNQGAEEFGKHLKETR-VHTVNLSGNEIGNQGAEEFGK 394

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             +E + +  ++L+ N I  +GA    + L      A+ NL    +   GA   AK+L +
Sbjct: 395 HLQETQ-VHTVDLSGNEIDDQGAEGFTKHLQGTQVQAV-NLSFNNISDQGAEGFAKHLKE 452

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            T +  VNL+ N+IS QG     K ++ +T++  +++S NQ G++G+EE  K ++
Sbjct: 453 -TKVHTVNLSYNQISDQGAEGFAKHLQ-ETQVHTVDLSGNQIGDQGIEEFGKHLQ 505


>gi|326433023|gb|EGD78593.1| hypothetical protein PTSG_09285 [Salpingoeca sp. ATCC 50818]
          Length = 1250

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 14/253 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL- 279
           LK    L  L L  N+ G  G   LA++L+ +    LEEL L NN +G  G   L++ L 
Sbjct: 88  LKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTT--LEELSLYNNSIGDEGAVALAEMLK 145

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
           H+            AL+      N + ++GA +LA + K   T+  + +  N I   G  
Sbjct: 146 HNT-----------ALETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGANSIGDEGAV 194

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL++  + N  L+ L L  N+I  +GA+ L + L    +L  L L    +   GA ++A+
Sbjct: 195 ALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAVALAE 254

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  NTTL  +NL  N I  +G + L + +K+ T L  + +  N+  E G+  + K ++ 
Sbjct: 255 MLKHNTTLTGLNLGANSIGDEGAVALAEMLKHNTTLTWLGIGRNRITERGMVNVLKQLQH 314

Query: 460 FGMAAALVLEDDE 472
               A + L +D+
Sbjct: 315 IDAKAKIRLFEDK 327



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L L  N+ GP G   LA++L+ +    LE L L  N +G  G   L++ L
Sbjct: 59  ALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTT--LERLSLRWNSIGDEGAAALAEML 116

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
              + ++ +E     L ++    N + +EGA  LA + K    LE + +  N I   G  
Sbjct: 117 K--HNTTLEE-----LSLY---NNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAV 166

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            L++  + N  +  LNL  N+I  +GA+ L + L    +L  L L    + + GA ++A+
Sbjct: 167 VLAEMLKHNTTMTGLNLGANSIGDEGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAE 226

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NTTLE + L  N +  +G + L + +K+ T L  +N+  N  G+EG   + +++K
Sbjct: 227 MLKHNTTLERLFLERNRVGDKGAVALAEMLKHNTTLTGLNLGANSIGDEGAVALAEMLK 285



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 12/228 (5%)

Query: 231 DLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEG 290
           +L     G I    +A+ L+ + C  L+ L L  N +G  G   L++ L       +   
Sbjct: 42  NLGGYGLGAIEARAVAEALKDNTC--LKRLYLWGNSIGPEGAVALAEMLKHNTTLER--- 96

Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
             L+L+      N + +EGA  LA + K   TLE + +  N I   G  AL++  + N  
Sbjct: 97  --LSLRW-----NSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTA 149

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           L  L L++N+I  +GA+ L + L    ++  LNLG   +   GA ++A+ L  NT L+++
Sbjct: 150 LETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGANSIGDEGAVALAEMLKHNTALKEL 209

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N I  QG + L + +K+ T L+++ +  N+ G++G   + +++K
Sbjct: 210 YLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAVALAEMLK 257



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 159/347 (45%), Gaps = 42/347 (12%)

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NLG   L +  A ++A+ L DNT L+ + L  N I  +G + L + +K+ T L+++++  
Sbjct: 42  NLGGYGLGAIEARAVAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRW 101

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLED----DEGECSDEEQDEESEEENDSDAEGDNSN 187
           N  G+EG   + +++K       L L +    DEG  +  E                   
Sbjct: 102 NSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEGAVALAEM------------------ 143

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
           L HN +  +    N S  +           H +  TG     L+L  N+ G  G   LA+
Sbjct: 144 LKHNTALETLYLDNNSIGDQGAVVLAEMLKHNTTMTG-----LNLGANSIGDEGAVALAE 198

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
           +L+ +   AL+EL L  N +G  G   L++ L        K  + L  ++F+  RNR+ +
Sbjct: 199 MLKHNT--ALKELYLEGNSIGNQGAVALAEML--------KHNTTLE-RLFLE-RNRVGD 246

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           +GA  LA + K   TL  + +  N I   G  AL++  + N  L  L +  N IT +G +
Sbjct: 247 KGAVALAEMLKHNTTLTGLNLGANSIGDEGAVALAEMLKHNTTLTWLGIGRNRITERGMV 306

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLT 413
            + + L  + + A + L +  LKS  ++++A+ L T  T   D+N+ 
Sbjct: 307 NVLKQLQHIDAKAKIRLFEDKLKS--STAVARALATLRTKQPDINVV 351



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 81/146 (55%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K   TLE + +  N I   G  AL++  + N  L  L L++N+I  +GA+ L + 
Sbjct: 112 LAEMLKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEM 171

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  LNLG   +   GA ++A+ L  NT L+++ L  N I  QG + L + +K+ 
Sbjct: 172 LKHNTTMTGLNLGANSIGDEGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAEMLKHN 231

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L+++ +  N+ G++G   + +++K
Sbjct: 232 TTLERLFLERNRVGDKGAVALAEMLK 257



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 77/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K   TLE + +  N I   G  AL++  + N  L  L+L +N+I  +GA+ L + 
Sbjct: 84  LAEMLKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTTLEELSLYNNSIGDEGAVALAEM 143

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +   GA  +A+ L  NTT+  +NL  N I  +G + L + +K+ 
Sbjct: 144 LKHNTALETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGANSIGDEGAVALAEMLKHN 203

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T LK++ +  N  G +G   + +++K
Sbjct: 204 TALKELYLEGNSIGNQGAVALAEMLK 229



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA + K   T+  + +  N I   G  AL++  + N  L+ L L  N+I  +GA+ L +
Sbjct: 167 VLAEMLKHNTTMTGLNLGANSIGDEGAVALAEMLKHNTALKELYLEGNSIGNQGAVALAE 226

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L    +L  L L    +   GA ++A+ L  NTTL  +NL  N I  +G + L + +K+
Sbjct: 227 MLKHNTTLERLFLERNRVGDKGAVALAEMLKHNTTLTGLNLGANSIGDEGAVALAEMLKH 286

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
            T L  + +  N+  E G+  + K ++     A + L +D+
Sbjct: 287 NTTLTWLGIGRNRITERGMVNVLKQLQHIDAKAKIRLFEDK 327



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 75/146 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K    LE + +  N I   G   L++  + N  +  LNL  N+I  +GA+ L + 
Sbjct: 140 LAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGANSIGDEGAVALAEM 199

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    + + GA ++A+ L  NTTLE + L  N +  +G + L + +K+ 
Sbjct: 200 LKHNTALKELYLEGNSIGNQGAVALAEMLKHNTTLERLFLERNRVGDKGAVALAEMLKHN 259

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  +N+  N  G+EG   + +++K
Sbjct: 260 TTLTGLNLGANSIGDEGAVALAEMLK 285



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 70/119 (58%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A ++N  L+ L L  N+I  +GA+ L + L    +L  L+L    +   GA+++A+
Sbjct: 55  AVAEALKDNTCLKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAE 114

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            L  NTTLE+++L  N I  +G + L + +K+ T L+ + +  N  G++G   + +++K
Sbjct: 115 MLKHNTTLEELSLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLK 173



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 71/136 (52%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N I   G  AL++  + N  L  L+L  N+I  +GA  L + L    +L  L
Sbjct: 66  LKRLYLWGNSIGPEGAVALAEMLKHNTTLERLSLRWNSIGDEGAAALAEMLKHNTTLEEL 125

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L +  +   GA ++A+ L  NT LE + L  N I  QG + L + +K+ T +  +N+  
Sbjct: 126 SLYNNSIGDEGAVALAEMLKHNTALETLYLDNNSIGDQGAVVLAEMLKHNTTMTGLNLGA 185

Query: 132 NQFGEEGVEEMEKLMK 147
           N  G+EG   + +++K
Sbjct: 186 NSIGDEGAVALAEMLK 201


>gi|254692966|ref|NP_001028379.2| protein NLRC5 [Mus musculus]
 gi|306756308|sp|C3VPR6.2|NLRC5_MOUSE RecName: Full=Protein NLRC5
          Length = 1915

 Score = 82.0 bits (201), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 119/516 (23%), Positives = 196/516 (37%), Gaps = 72/516 (13%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            L     K   L  +++  N +  +G+  L +   +      L+L+ N I+ +G + L + 
Sbjct: 1233 LCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSHNNISQEGILYLLET 1292

Query: 62   LSKLPSLAILNLG--------DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
            L   P++  +++          C  K  GA +  +    + + E V+   + +S    L 
Sbjct: 1293 LPSYPNIQEVSVSLSSEQIFRMCFSKKEGAGTSLRLCECSFSPEQVSKLASSLSQAQQLT 1352

Query: 114  LVKAMKNKTKLKQI----NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQ 169
             +   K    L Q+    N+     G  G+   E  + S  + A + +      C  E  
Sbjct: 1353 ELWLTKCHLDLPQLTMLLNLVNRPTGLLGLRLEEPWVDSVSLPALMEVCAQASGCLTELS 1412

Query: 170  DEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLK---TGAR 226
              E + +     E       H + N    A   +H +    H     SH+ ++   T AR
Sbjct: 1413 ISEIQRKLWLQLE-----FPHQEGNSDSMALRLAHCDLETEH-----SHLMIQLVETYAR 1462

Query: 227  LVELDLSDNAFGP---IGVEGLADLLRSSC--------------------------CFAL 257
            L +L LS  +F        + L ++L SSC                          C  L
Sbjct: 1463 LQQLSLSQVSFNDNDGTSSKLLQNILLSSCELKSFRLTFSQVSTKSLTHLAFGLGHCHHL 1522

Query: 258  EELKLNNNGLGITGCKLLSKALHDCYESSKKEGS--PL---ALKVFIAG----------- 301
            EEL  +NN L     +LL  AL       K   S  PL   +L + I G           
Sbjct: 1523 EELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLC 1582

Query: 302  --RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
               N++ + G + LAA+  KL  L + ++  N I  VG   L+    +   LR  NL+ N
Sbjct: 1583 LSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHN 1642

Query: 360  TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
             I + G   L   L KLP L   +L    +   G   +A  L     L   +L+ N I  
Sbjct: 1643 QIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGP 1702

Query: 420  QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
             GG+ LVK++ +   L++I +  N  GE    E+ +
Sbjct: 1703 AGGVQLVKSLTHFEHLEEIKLGNNALGEPTALELAQ 1738



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 25/273 (9%)

Query: 195  HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS-SC 253
            H H+      +N++     +     +L+   RL +L LS   F P+G   LA L++  S 
Sbjct: 1518 HCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLS---FLPLGASSLALLIQGLSR 1574

Query: 254  CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
               L++L L++N +G  G + L+  L    E          L+ F    N++ + G + L
Sbjct: 1575 MTLLQDLCLSHNQIGDVGTQCLAAILPKLPE----------LRKFDLSHNQIGDVGTQCL 1624

Query: 314  AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
            AA+  KL  L +  +  N I HVG   L+    +   LR  +L+ N I   G   L   L
Sbjct: 1625 AAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAIL 1684

Query: 374  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
             KLP L   +L    +  AG   + K LT    LE++ L  N +     L+L  A +   
Sbjct: 1685 PKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALEL--AQRLPP 1742

Query: 434  KLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
            +L+ + +  +  G EG         + G+A AL
Sbjct: 1743 QLRVLCLPSSHLGPEG---------ALGLAQAL 1766



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 160/416 (38%), Gaps = 63/416 (15%)

Query: 27   ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 86
            +T L+        L  L+ ++N++  +    L  AL     L  L+L    L ++  + +
Sbjct: 1509 LTHLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALL 1568

Query: 87   AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
             + L+  T L+D+ L+ N+I   G   L   +    +L++ ++S NQ G+ G + +  ++
Sbjct: 1569 IQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAIL 1628

Query: 147  KSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS------ 200
                                               E    NLSHN   H           
Sbjct: 1629 PKL-------------------------------PELRKFNLSHNQIGHVGTQCLAAILP 1657

Query: 201  -----NQSHNNSNQSHNTSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
                  +   + NQ  +   Q   + L     L + DLS N  GP G      L++S   
Sbjct: 1658 KLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGG---VQLVKSLTH 1714

Query: 255  FA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
            F  LEE+KL NN LG      L++ L            P  L+V     + L  EGA  L
Sbjct: 1715 FEHLEEIKLGNNALGEPTALELAQRL------------PPQLRVLCLPSSHLGPEGALGL 1762

Query: 314  AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
            A   ++   +E V + +N +   G+   S        LR ++L    I  + A  L   L
Sbjct: 1763 AQALEQCPHIEEVSLAENNLAG-GVPRFSKRLPL---LRQIDLEFCKIEDQAARHLAANL 1818

Query: 374  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            +  P+L  L L   LL    A+ +A+ L     L+ VNL  N I+ +G   L + +
Sbjct: 1819 TLFPALEKLLLSGNLLGDEVAAELAQVLPQMGQLKKVNLEWNRITARGAQLLAQGL 1874



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LAA+  KL  L    +  N I HVG   L+    +  +LR  +L+ N I   G   L   
Sbjct: 1624 LAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAI 1683

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L KLP L   +L    +  AG   + K LT    LE++ L  N +     L+L  A +  
Sbjct: 1684 LPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALEL--AQRLP 1741

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
             +L+ + +  +  G EG         + G+A AL
Sbjct: 1742 PQLRVLCLPSSHLGPEG---------ALGLAQAL 1766



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 23/342 (6%)

Query: 58   LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
            L ++L  + SL  L L    + + G S + + L   + LE+V+L  N++     L LV+ 
Sbjct: 709  LCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVEL 768

Query: 118  MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEGECSDEEQDEESEEE 176
            + +  KL+++++S N F    +  + K+  +      L V E D         +  +++ 
Sbjct: 769  LPSLPKLQKLDLSRNSFSRSILLSLVKVAITCPTVRKLQVRELDLIFYLSPVTETATQQS 828

Query: 177  NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSL-KTGARLVELDLSDN 235
              SD +G +S           + S Q      Q      ++ + L +   +L E++LS N
Sbjct: 829  GASDVQGKDS------LKEGQSRSLQLRLQKCQLRIRDAEALVELFQKSPQLEEVNLSGN 882

Query: 236  AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
                 G   +A+   +S     ++L L++NGL  TG   + KA+  C        S L  
Sbjct: 883  HLEDDGCRLVAE--AASQLHIAQKLDLSDNGLSQTGVTYVLKAMSTCGTLEDLHISLLNN 940

Query: 296  KVFIA-GRNRLENEGA--------KMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAF 345
             V +   +   E EG+          ++ V  +L +   R+ +   G        L +A 
Sbjct: 941  TVVLTFAQEPREQEGSCKGRAPLISFVSPVTSELSQRSRRIRLTHCGFLAKHTETLCEAL 1000

Query: 346  E---ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
                +  NL HL+L+DN++  KG I L + L  L  L  LNL
Sbjct: 1001 RASCQTHNLDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNL 1042


>gi|227809548|gb|ACP40992.1| NLRC5 [Mus musculus]
          Length = 1915

 Score = 82.0 bits (201), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 119/516 (23%), Positives = 196/516 (37%), Gaps = 72/516 (13%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            L     K   L  +++  N +  +G+  L +   +      L+L+ N I+ +G + L + 
Sbjct: 1233 LCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSHNNISQEGILYLLET 1292

Query: 62   LSKLPSLAILNLG--------DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
            L   P++  +++          C  K  GA +  +    + + E V+   + +S    L 
Sbjct: 1293 LPSYPNIQEVSVSLSSEQIFRMCFSKKEGAGTSLRLCECSFSPEQVSKLASSLSQAQQLT 1352

Query: 114  LVKAMKNKTKLKQI----NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQ 169
             +   K    L Q+    N+     G  G+   E  + S  + A + +      C  E  
Sbjct: 1353 ELWLTKCHLDLPQLTMLLNLVNRPTGLLGLRLEEPWVDSVSLPALMEVCAQASGCLTELS 1412

Query: 170  DEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLK---TGAR 226
              E + +     E       H + N    A   +H +    H     SH+ ++   T AR
Sbjct: 1413 ISEIQRKLWLQLE-----FPHQEGNSDSMALRLAHCDLETEH-----SHLMIQLVETYAR 1462

Query: 227  LVELDLSDNAFGP---IGVEGLADLLRSSC--------------------------CFAL 257
            L +L LS  +F        + L ++L SSC                          C  L
Sbjct: 1463 LQQLSLSQVSFNDNDGTSSKLLQNILLSSCELKSFRLTFSQVSTKSLTHLAFGLGHCHHL 1522

Query: 258  EELKLNNNGLGITGCKLLSKALHDCYESSKKEGS--PL---ALKVFIAG----------- 301
            EEL  +NN L     +LL  AL       K   S  PL   +L + I G           
Sbjct: 1523 EELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLC 1582

Query: 302  --RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
               N++ + G + LAA+  KL  L + ++  N I  VG   L+    +   LR  NL+ N
Sbjct: 1583 LSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHN 1642

Query: 360  TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
             I + G   L   L KLP L   +L    +   G   +A  L     L   +L+ N I  
Sbjct: 1643 QIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGP 1702

Query: 420  QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
             GG+ LVK++ +   L++I +  N  GE    E+ +
Sbjct: 1703 AGGVQLVKSLTHFEHLEEIKLGNNALGEPTALELAQ 1738



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 25/273 (9%)

Query: 195  HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS-SC 253
            H H+      +N++     +     +L+   RL +L LS   F P+G   LA L++  S 
Sbjct: 1518 HCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLS---FLPLGASSLALLIQGLSR 1574

Query: 254  CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
               L++L L++N +G  G + L+  L    E          L+ F    N++ + G + L
Sbjct: 1575 MTLLQDLCLSHNQIGDVGTQCLAAILPKLPE----------LRKFDLSHNQIGDVGTQCL 1624

Query: 314  AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
            AA+  KL  L +  +  N I HVG   L+    +   LR  +L+ N I   G   L   L
Sbjct: 1625 AAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAIL 1684

Query: 374  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
             KLP L   +L    +  AG   + K LT    LE++ L  N +     L+L  A +   
Sbjct: 1685 PKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALEL--AQRLPP 1742

Query: 434  KLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
            +L+ + +  +  G EG         + G+A AL
Sbjct: 1743 QLRVLCLPSSHLGPEG---------ALGLAQAL 1766



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 160/416 (38%), Gaps = 63/416 (15%)

Query: 27   ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 86
            +T L+        L  L+ ++N++  +    L  AL     L  L+L    L ++  + +
Sbjct: 1509 LTHLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALL 1568

Query: 87   AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
             + L+  T L+D+ L+ N+I   G   L   +    +L++ ++S NQ G+ G + +  ++
Sbjct: 1569 IQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAIL 1628

Query: 147  KSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS------ 200
                                               E    NLSHN   H           
Sbjct: 1629 PKL-------------------------------PELRKFNLSHNQIGHVGTQCLAAILP 1657

Query: 201  -----NQSHNNSNQSHNTSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
                  +   + NQ  +   Q   + L     L + DLS N  GP G      L++S   
Sbjct: 1658 KLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGG---VQLVKSLTH 1714

Query: 255  FA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
            F  LEE+KL NN LG      L++ L            P  L+V     + L  EGA  L
Sbjct: 1715 FEHLEEIKLGNNALGEPTALELAQRL------------PPQLRVLCLPSSHLGPEGALGL 1762

Query: 314  AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
            A   ++   +E V + +N +   G+   S        LR ++L    I  + A  L   L
Sbjct: 1763 AQALEQCPHIEEVSLAENNLAG-GVPRFSKRLPL---LRQIDLEFCKIEDQAARHLAANL 1818

Query: 374  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            +  P+L  L L   LL    A+ +A+ L     L+ VNL  N I+ +G   L + +
Sbjct: 1819 TLFPALEKLLLSGNLLGDEVAAELAQVLPQMGQLKKVNLEWNRITARGAQLLAQGL 1874



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LAA+  KL  L    +  N I HVG   L+    +  +LR  +L+ N I   G   L   
Sbjct: 1624 LAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAI 1683

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L KLP L   +L    +  AG   + K LT    LE++ L  N +     L+L  A +  
Sbjct: 1684 LPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALEL--AQRLP 1741

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
             +L+ + +  +  G EG         + G+A AL
Sbjct: 1742 PQLRVLCLPSSHLGPEG---------ALGLAQAL 1766



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 23/342 (6%)

Query: 58   LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
            L ++L  + SL  L L    + + G S + + L   + LE+V+L  N++     L LV+ 
Sbjct: 709  LCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVEL 768

Query: 118  MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEGECSDEEQDEESEEE 176
            + +  KL+++++S N F    +  + K+  +      L V E D         +  +++ 
Sbjct: 769  LPSLPKLQKLDLSRNSFSRSILLSLVKVAITCPTVRKLQVRELDLIFYLSPVTETATQQS 828

Query: 177  NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSL-KTGARLVELDLSDN 235
              SD +G +S           + S Q      Q      ++ + L +   +L E++LS N
Sbjct: 829  GASDVQGKDS------LKEGQSRSLQLRLQKCQLRIRDAEALVELFQKSPQLEEVNLSRN 882

Query: 236  AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
                 G   +A+   +S     ++L L++NGL  TG   + KA+  C        S L  
Sbjct: 883  HLEDDGCRLVAE--AASQLHIAQKLDLSDNGLSQTGVTYVLKAMSTCGTLEDLHISLLNN 940

Query: 296  KVFIA-GRNRLENEGA--------KMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAF 345
             V +   +   E EG+          ++ V  +L +   R+ +   G        L +A 
Sbjct: 941  TVVLTFAQEPREQEGSCKGRAPLISFVSPVTSELSQRSRRIRLTHCGFLAKHTETLCEAL 1000

Query: 346  E---ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
                +  NL HL+L+DN++  KG I L + L  L  L  LNL
Sbjct: 1001 RASCQTHNLDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNL 1042


>gi|301605002|ref|XP_002932147.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Xenopus (Silurana) tropicalis]
          Length = 490

 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 13/216 (6%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L T  R+V LDLSDN  G  G   +A++L+ +C  +  E+ L +N LG+ G K LS  
Sbjct: 171 VTLVTNTRIVTLDLSDNWLGGEGAAAIAEMLKENCYIS--EIHLADNKLGVKGAKALS-- 226

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
            H   E++  +      K+ ++G N   +E A+ ++  F   + +E  ++  N       
Sbjct: 227 -HMLVENTTLQ------KLNLSG-NEFSDEAAQYISEAFMSNQKVECTDLSHNMFGEGSG 278

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             L  A  EN  +  LNL+ N    KGA  + + L     L  ++L      + GA+++ 
Sbjct: 279 ETLGTAIAENTGMLELNLSWNNFRGKGAAAIARGLGANIFLKAIDLSYNGFGNDGAAALG 338

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKT 433
           + L  N  LED+N++ N ISVQG +     +K NKT
Sbjct: 339 EALKVNNVLEDINISNNRISVQGAVRFAMCLKANKT 374



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 5/130 (3%)

Query: 12  LEHVEMPQNGIYHVGI-----TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           L H++ P+  + H G+      AL+     N ++  L+L+DN +  +GA  + + L +  
Sbjct: 146 LRHLQDPELVMRHHGLGPQATKALAVTLVTNTRIVTLDLSDNWLGGEGAAAIAEMLKENC 205

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            ++ ++L D  L   GA +++  L +NTTL+ +NL+ NE S +    + +A  +  K++ 
Sbjct: 206 YISEIHLADNKLGVKGAKALSHMLVENTTLQKLNLSGNEFSDEAAQYISEAFMSNQKVEC 265

Query: 127 INVSENQFGE 136
            ++S N FGE
Sbjct: 266 TDLSHNMFGE 275



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 26/238 (10%)

Query: 40  LRHLNLNDNTITYKGAIP-----LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 94
           LRHL   +  + + G  P     L   L     +  L+L D  L   GA++IA+ L +N 
Sbjct: 146 LRHLQDPELVMRHHGLGPQATKALAVTLVTNTRIVTLDLSDNWLGGEGAAAIAEMLKENC 205

Query: 95  TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 154
            + +++L  N++ V+G   L   +   T L+++N+S N+F +E  + + +   S      
Sbjct: 206 YISEIHLADNKLGVKGAKALSHMLVENTTLQKLNLSGNEFSDEAAQYISEAFMS------ 259

Query: 155 LVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTS 214
               + + EC+D   +   E   ++       N    + N S N         N     +
Sbjct: 260 ----NQKVECTDLSHNMFGEGSGETLGTAIAENTGMLELNLSWN---------NFRGKGA 306

Query: 215 NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
                 L     L  +DLS N FG  G   L + L+ +    LE++ ++NN + + G 
Sbjct: 307 AAIARGLGANIFLKAIDLSYNGFGNDGAAALGEALKVNNV--LEDINISNNRISVQGA 362



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L  A  EN  +  LNL+ N    KGA  + + L     L  ++L      + GA+++ + 
Sbjct: 281 LGTAIAENTGMLELNLSWNNFRGKGAAAIARGLGANIFLKAIDLSYNGFGNDGAAALGEA 340

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKT 122
           L  N  LED+N++ N ISVQG +     +K NKT
Sbjct: 341 LKVNNVLEDINISNNRISVQGAVRFAMCLKANKT 374



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 65/138 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ + +  N         +S+AF  N+K+   +L+ N         LG A+++   +  
Sbjct: 234 TLQKLNLSGNEFSDEAAQYISEAFMSNQKVECTDLSHNMFGEGSGETLGTAIAENTGMLE 293

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL     +  GA++IA+ L  N  L+ ++L+ N     G   L +A+K    L+ IN+S
Sbjct: 294 LNLSWNNFRGKGAAAIARGLGANIFLKAIDLSYNGFGNDGAAALGEALKVNNVLEDINIS 353

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N+   +G       +K+
Sbjct: 354 NNRISVQGAVRFAMCLKA 371



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 66/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +  + +  N +   G  ALS    EN  L+ LNL+ N  + + A  + +A
Sbjct: 197 IAEMLKENCYISEIHLADNKLGVKGAKALSHMLVENTTLQKLNLSGNEFSDEAAQYISEA 256

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
                 +   +L   +       ++   + +NT + ++NL+ N    +G   + + +   
Sbjct: 257 FMSNQKVECTDLSHNMFGEGSGETLGTAIAENTGMLELNLSWNNFRGKGAAAIARGLGAN 316

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK I++S N FG +G   + + +K
Sbjct: 317 IFLKAIDLSYNGFGNDGAAALGEALK 342



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 5/133 (3%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A+++  +EN  +  ++L DN +  KGA  L   L +  +L  LNL         A  
Sbjct: 193 GAAAIAEMLKENCYISEIHLADNKLGVKGAKALSHMLVENTTLQKLNLSGNEFSDEAAQY 252

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           I++    N  +E  +L+ N      G  L  A+   T + ++N+S N F  +G   + + 
Sbjct: 253 ISEAFMSNQKVECTDLSHNMFGEGSGETLGTAIAENTGMLELNLSWNNFRGKGAAAIAR- 311

Query: 146 MKSFGMAAALVLE 158
               G+ A + L+
Sbjct: 312 ----GLGANIFLK 320


>gi|365991385|ref|XP_003672521.1| hypothetical protein NDAI_0K00870 [Naumovozyma dairenensis CBS 421]
 gi|343771297|emb|CCD27278.1| hypothetical protein NDAI_0K00870 [Naumovozyma dairenensis CBS 421]
          Length = 410

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 6/180 (3%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  ++LSDNAFG   ++ L   +  S    L+ L L+NNG+G    + + KAL    +  
Sbjct: 111 LTTINLSDNAFGLRTIDSLEHFI--SHAINLKHLILSNNGMGPFAGERIGKALFQLAQLK 168

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSD-A 344
           + +   + L+ FI GRNRLEN  A  LA   K  +  L+ V++ QNGI   GI  L    
Sbjct: 169 RSQDKHM-LETFICGRNRLENGSALYLAIGLKNHRDGLKIVKLYQNGIRPRGIANLIHYG 227

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTD 403
            + N+ L  L+L DNT T  G+  L + L     SL  LNL DCLLKS G+  + K   +
Sbjct: 228 LKFNEKLEILDLQDNTFTLLGSKVLAENLHVWAESLRELNLNDCLLKSKGSEEVFKVFNE 287



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   GI  L     + N+KL  L+L DNT T  G+  L + L     SL 
Sbjct: 205 LKIVKLYQNGIRPRGIANLIHYGLKFNEKLEILDLQDNTFTLLGSKVLAENLHVWAESLR 264

Query: 70  ILNLGDCLLKSAGASSIAKYLTD 92
            LNL DCLLKS G+  + K   +
Sbjct: 265 ELNLNDCLLKSKGSEEVFKVFNE 287


>gi|320170828|gb|EFW47727.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 789

 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 169/401 (42%), Gaps = 61/401 (15%)

Query: 21  GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 80
           GIY  G  ++ +A  EN  L  LN+  N I   GA  +   L    +L  L L +C L +
Sbjct: 61  GIY--GACSIGEALHENNVLTKLNMGHNQIGAPGAKAIAGGLKSNRTLQALLLEECDLGN 118

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
            GA ++A  L  NT+L  ++L  N I   G   + +++     L  +++S N F   GV+
Sbjct: 119 NGAQTLASALKVNTSLTRLDLRFNGIGDSGASAIARSLYFNNTLTSLDLSGNFFELAGVQ 178

Query: 141 EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS 200
            +   +++    + L LE    +C             D++A+   S              
Sbjct: 179 AIAGALQANTTLSVLFLE----QC----------RITDAEAQAIAS-------------- 210

Query: 201 NQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEEL 260
                              +LK    L  LDL  N  G +G + +A+ L+ +    L  +
Sbjct: 211 -------------------ALKVNRGLTYLDLQRNQIGDVGAQSIAEALKVNKT--LTTI 249

Query: 261 KLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
            L +N +G+ G + +++ L    + +K      AL V     NR    G + +       
Sbjct: 250 HLLHNQIGVLGAQAIAETL----KVNK------ALCVLFLRENRFGAAGTQSIIQALGTN 299

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
           +TLER+ +  N        A+++  + NK L HL L D+ I   GA+ + + L    +L 
Sbjct: 300 RTLERLSLSCNHAGDAEAQAIAEVLKVNKTLTHLYLKDSLIGDTGALSIAETLKVSSTLR 359

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
            LNL +  +   GA +IAK L  N +L  + L+ N ++  G
Sbjct: 360 FLNLFNNEITDTGALAIAKALKVNKSLGTLILSKNFLTKAG 400



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 161/389 (41%), Gaps = 68/389 (17%)

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           ++GD L+     +++A+ L  +  +  +NL+ NEI + G   + +A+     L ++N+  
Sbjct: 31  DIGDDLV-----AALAEALKGHPAVTSLNLSSNEIGIYGACSIGEALHENNVLTKLNMGH 85

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           NQ G  G + +   +KS     AL+LE    EC                      +L +N
Sbjct: 86  NQIGAPGAKAIAGGLKSNRTLQALLLE----EC----------------------DLGNN 119

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
            +    +A                     LK    L  LDL  N  G  G   +A     
Sbjct: 120 GAQTLASA---------------------LKVNTSLTRLDLRFNGIGDSGASAIA----R 154

Query: 252 SCCF--ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           S  F   L  L L+ N   + G + ++ AL           +   L V    + R+ +  
Sbjct: 155 SLYFNNTLTSLDLSGNFFELAGVQAIAGALQ----------ANTTLSVLFLEQCRITDAE 204

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           A+ +A+  K  + L  +++ +N I  VG  ++++A + NK L  ++L  N I   GA  +
Sbjct: 205 AQAIASALKVNRGLTYLDLQRNQIGDVGAQSIAEALKVNKTLTTIHLLHNQIGVLGAQAI 264

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            + L    +L +L L +    +AG  SI + L  N TLE ++L+CN         + + +
Sbjct: 265 AETLKVNKALCVLFLRENRFGAAGTQSIIQALGTNRTLERLSLSCNHAGDAEAQAIAEVL 324

Query: 430 KNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           K    L  + + ++  G+ G   + + +K
Sbjct: 325 KVNKTLTHLYLKDSLIGDTGALSIAETLK 353



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 119/265 (44%), Gaps = 22/265 (8%)

Query: 213 TSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
           TS+Q  M          LD  +   G   V  LA+ L+     A+  L L++N +GI G 
Sbjct: 8   TSDQHDMFYAVCDSYGSLDYENEDIGDDLVAALAEALKGHP--AVTSLNLSSNEIGIYGA 65

Query: 273 KLLSKALHDCYESSK------KEGSPLALKVFIAG--RNR-----------LENEGAKML 313
             + +ALH+    +K      + G+P A K    G   NR           L N GA+ L
Sbjct: 66  CSIGEALHENNVLTKLNMGHNQIGAPGA-KAIAGGLKSNRTLQALLLEECDLGNNGAQTL 124

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A+  K   +L R+++  NGI   G +A++ +   N  L  L+L+ N     G   +  AL
Sbjct: 125 ASALKVNTSLTRLDLRFNGIGDSGASAIARSLYFNNTLTSLDLSGNFFELAGVQAIAGAL 184

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L++L L  C +  A A +IA  L  N  L  ++L  N+I   G   + +A+K   
Sbjct: 185 QANTTLSVLFLEQCRITDAEAQAIASALKVNRGLTYLDLQRNQIGDVGAQSIAEALKVNK 244

Query: 434 KLKQINVSENQFGEEGVEEMEKLMK 458
            L  I++  NQ G  G + + + +K
Sbjct: 245 TLTTIHLLHNQIGVLGAQAIAETLK 269



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 21/278 (7%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+  K   +L  +++  NGI   G +A++ +   N  L  L+L+ N     G   +  A
Sbjct: 124 LASALKVNTSLTRLDLRFNGIGDSGASAIARSLYFNNTLTSLDLSGNFFELAGVQAIAGA 183

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L++L L  C +  A A +IA  L  N  L  ++L  N+I   G   + +A+K  
Sbjct: 184 LQANTTLSVLFLEQCRITDAEAQAIASALKVNRGLTYLDLQRNQIGDVGAQSIAEALKVN 243

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L  I++  NQ G  G + + + +K       L L                  EN   A
Sbjct: 244 KTLTTIHLLHNQIGVLGAQAIAETLKVNKALCVLFL-----------------RENRFGA 286

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
            G  S +    +N +    + S N++  +   +      LK    L  L L D+  G  G
Sbjct: 287 AGTQSIIQALGTNRTLERLSLSCNHAGDAEAQAIAE--VLKVNKTLTHLYLKDSLIGDTG 344

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
              +A+ L+ S    L  L L NN +  TG   ++KAL
Sbjct: 345 ALSIAETLKVSST--LRFLNLFNNEITDTGALAIAKAL 380



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 3/167 (1%)

Query: 306 ENEGAKMLAAVFKKLK---TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           E+ G  ++AA+ + LK    +  + +  N I   G  ++ +A  EN  L  LN+  N I 
Sbjct: 30  EDIGDDLVAALAEALKGHPAVTSLNLSSNEIGIYGACSIGEALHENNVLTKLNMGHNQIG 89

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  +   L    +L  L L +C L + GA ++A  L  NT+L  ++L  N I   G 
Sbjct: 90  APGAKAIAGGLKSNRTLQALLLEECDLGNNGAQTLASALKVNTSLTRLDLRFNGIGDSGA 149

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
             + +++     L  +++S N F   GV+ +   +++    + L LE
Sbjct: 150 SAIARSLYFNNTLTSLDLSGNFFELAGVQAIAGALQANTTLSVLFLE 196


>gi|320168023|gb|EFW44922.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 487

 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 12/236 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L EL LS N  G  G + +A+ L+ +    + EL +N N +G    +++++ L
Sbjct: 71  ALKVTKTLSELYLSHNQIGHAGAQAIAEALKGNKT--VTELNMNGNQIGDGEAQVIAEML 128

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +P  LK+     N     GA+ +A   K  KTL  + +  N I   G  
Sbjct: 129 -------KVNTTPTTLKL---ANNHFGCAGARAIAEALKMNKTLIELVLGGNQIGDAGAQ 178

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A   NK L  L L+ N I   GA  + +AL    +L+ LNL D  +  AGA +IA+
Sbjct: 179 AIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLNLIDNQIGDAGAQAIAE 238

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            L  N  ++ + L  N I   G  ++  A+K  T LK +++  N  G  G++ + +
Sbjct: 239 ALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSNCIGNAGLQAIRE 294



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 72/143 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I   G  A+++A   NK L  L L+ N I   GA  + +A
Sbjct: 152 IAEALKMNKTLIELVLGGNQIGDAGAQAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEA 211

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+ LNL D  +  AGA +IA+ L  N  ++ + L  N I   G  ++  A+K  
Sbjct: 212 LQVNKTLSWLNLIDNQIGDAGAQAIAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVN 271

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
           T LK +++  N  G  G++ + +
Sbjct: 272 TTLKWLDLRSNCIGNAGLQAIRE 294



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++++  A  +A   K  KTL  + +  N I H G  A+++A + NK +  LN+N N I 
Sbjct: 58  NQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGNKTVTELNMNGNQIG 117

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
              A  + + L    +   L L +     AGA +IA+ L  N TL ++ L  N+I   G 
Sbjct: 118 DGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLIELVLGGNQIGDAGA 177

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A++    L ++ + +NQ G+ G + + + ++
Sbjct: 178 QAIAEALRVNKTLTRLGLDKNQIGDAGAKAIAEALQ 213



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I H G  A+++A + NK +  LN+N N I    A  + + 
Sbjct: 68  IAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGNKTVTELNMNGNQIGDGEAQVIAEM 127

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +   L L +     AGA +IA+ L  N TL ++ L  N+I   G   + +A++  
Sbjct: 128 LKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLIELVLGGNQIGDAGAQAIAEALRVN 187

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++ + +NQ G+ G + + + ++
Sbjct: 188 KTLTRLGLDKNQIGDAGAKAIAEALQ 213



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A + K   T   +++  N     G  A+++A + NK L  L L  N I   GA  + +
Sbjct: 123 VIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLIELVLGGNQIGDAGAQAIAE 182

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  L L    +  AGA +IA+ L  N TL  +NL  N+I   G   + +A+K 
Sbjct: 183 ALRVNKTLTRLGLDKNQIGDAGAKAIAEALQVNKTLSWLNLIDNQIGDAGAQAIAEALKG 242

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
              ++ + +  N+  + G +E+   +K
Sbjct: 243 NMPVQTLYLDWNRIDDAGAQEIAGALK 269



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 12/190 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK       L L++N FG  G   +A+ L+ +    L EL L  N +G  G + +++AL 
Sbjct: 128 LKVNTTPTTLKLANNHFGCAGARAIAEALKMNKT--LIELVLGGNQIGDAGAQAIAEALR 185

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                  K  + L L      +N++ + GAK +A   +  KTL  + +  N I   G  A
Sbjct: 186 -----VNKTLTRLGLD-----KNQIGDAGAKAIAEALQVNKTLSWLNLIDNQIGDAGAQA 235

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++A + N  ++ L L+ N I   GA  +  AL    +L  L+L    + +AG  +I + 
Sbjct: 236 IAEALKGNMPVQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSNCIGNAGLQAIREA 295

Query: 401 LTDNTTLEDV 410
              N TL ++
Sbjct: 296 SQVNRTLSNL 305



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 138/345 (40%), Gaps = 72/345 (20%)

Query: 37  NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
           NK +  L L +N I    A  + +AL    +L+ L L    +  AGA +IA+ L  N T+
Sbjct: 47  NKTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGNKTV 106

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
            ++N+  N+I       + + +K  T    + ++ N FG  G   + + +K       LV
Sbjct: 107 TELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLIELV 166

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
           L  +              +  D+ A+     L  N +                       
Sbjct: 167 LGGN--------------QIGDAGAQAIAEALRVNKT----------------------- 189

Query: 217 SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS 276
                     L  L L  N  G  G + +A+ L+ +    L  L L +N +G  G + ++
Sbjct: 190 ----------LTRLGLDKNQIGDAGAKAIAEALQVNKT--LSWLNLIDNQIGDAGAQAIA 237

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
           +AL        K   P  ++      NR+++ GA+ +A   K   TL+ +++  N I + 
Sbjct: 238 EAL--------KGNMP--VQTLYLDWNRIDDAGAQEIAGALKVNTTLKWLDLRSNCIGNA 287

Query: 337 GITALSDAFEENKNLRHL-NLNDNTITYKGAIPLGQALSKLPSLA 380
           G+ A+ +A + N+ L +L  +N          PL  A S LP LA
Sbjct: 288 GLQAIREASQVNRTLSNLCQIN----------PL--AFSLLPRLA 320



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 63/138 (45%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KT+  + +  N I       +++A +  K L  L L+ N I + GA  + +AL    ++ 
Sbjct: 48  KTVTALWLKNNQIDDAAANTIAEALKVTKTLSELYLSHNQIGHAGAQAIAEALKGNKTVT 107

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            LN+    +    A  IA+ L  NTT   + L  N     G   + +A+K    L ++ +
Sbjct: 108 ELNMNGNQIGDGEAQVIAEMLKVNTTPTTLKLANNHFGCAGARAIAEALKMNKTLIELVL 167

Query: 130 SENQFGEEGVEEMEKLMK 147
             NQ G+ G + + + ++
Sbjct: 168 GGNQIGDAGAQAIAEALR 185


>gi|320169702|gb|EFW46601.1| hypothetical protein CAOG_04559 [Capsaspora owczarzaki ATCC 30864]
          Length = 391

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 12/252 (4%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  L L  N  G +GV+ +A+ L+ +    L  L L++N +G  G K+L++AL 
Sbjct: 41  LKVNTTLTWLKLEKNQIGDLGVQAIAEALKVNT--TLTYLDLDSNQIGDAGAKVLAEAL- 97

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                 K   +   L +     +++   GA+ +    K   TL  +++  N I   G  A
Sbjct: 98  ------KGHTTLTGLGL---NTSQIGEVGAQAICEALKVNSTLTMLDLDANQIGDAGAQA 148

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           ++ A + N  L  LNL+ N I   GA  + QAL    +L  L L    +  AGA +I + 
Sbjct: 149 IAQALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEA 208

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           L  N  L D+ L+ N I   G   +  A+K  T L  +N+SENQ G  G E + + +K  
Sbjct: 209 LKVNKRLIDLRLSENHIGDAGANTIAAALKVNTTLTWLNLSENQIGNVGAEAIAEALKVN 268

Query: 461 GMAAALVLEDDE 472
              A L L  +E
Sbjct: 269 TTLAVLGLHTNE 280



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 37/277 (13%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++ +N I  +G+ A+++A + N  L +L+L+ N I   GA  L +AL    +L  
Sbjct: 46  TLTWLKLEKNQIGDLGVQAIAEALKVNTTLTYLDLDSNQIGDAGAKVLAEALKGHTTLTG 105

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    +   GA +I + L  N+TL  ++L  N+I   G   + +A+K  T L  +N+ 
Sbjct: 106 LGLNTSQIGEVGAQAICEALKVNSTLTMLDLDANQIGDAGAQAIAQALKVNTTLTWLNLD 165

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            NQ G+ G + + + +K       L L              ++ +  D+ A+     L  
Sbjct: 166 GNQIGDAGAQAIAQALKVNSTLKKLFL--------------DANQIGDAGAQAIGEALKV 211

Query: 191 N--------DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGV 242
           N          NH  +A              +N    +LK    L  L+LS+N  G +G 
Sbjct: 212 NKRLIDLRLSENHIGDAG-------------ANTIAAALKVNTTLTWLNLSENQIGNVGA 258

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           E +A+ L+ +   A+  L L+ N +G  G   L+ AL
Sbjct: 259 EAIAEALKVNTTLAV--LGLHTNEIGDDGACELADAL 293



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 20/242 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  LDL  N  G  G + LA+ L+      L  L LN + +G  G + + +AL
Sbjct: 68  ALKVNTTLTYLDLDSNQIGDAGAKVLAEALKGHT--TLTGLGLNTSQIGEVGAQAICEAL 125

Query: 280 H------------DCYESSKKEGSPLALKVFIA------GRNRLENEGAKMLAAVFKKLK 321
                        +    +  +    ALKV           N++ + GA+ +A   K   
Sbjct: 126 KVNSTLTMLDLDANQIGDAGAQAIAQALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNS 185

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           TL+++ +  N I   G  A+ +A + NK L  L L++N I   GA  +  AL    +L  
Sbjct: 186 TLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLRLSENHIGDAGANTIAAALKVNTTLTW 245

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           LNL +  + + GA +IA+ L  NTTL  + L  NEI   G  +L  A++  T + ++++ 
Sbjct: 246 LNLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALEVNTTMTKLHLD 305

Query: 442 EN 443
            N
Sbjct: 306 RN 307



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 74/147 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA   K   TL  + +  + I  VG  A+ +A + N  L  L+L+ N I   GA  + Q
Sbjct: 92  VLAEALKGHTTLTGLGLNTSQIGEVGAQAICEALKVNSTLTMLDLDANQIGDAGAQAIAQ 151

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  LNL    +  AGA +IA+ L  N+TL+ + L  N+I   G   + +A+K 
Sbjct: 152 ALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKV 211

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
             +L  + +SEN  G+ G   +   +K
Sbjct: 212 NKRLIDLRLSENHIGDAGANTIAAALK 238



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 36/321 (11%)

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L  NTTL  + L  N+I   G   + +A+K  T L  +++  NQ G+ G + + + +K  
Sbjct: 41  LKVNTTLTWLKLEKNQIGDLGVQAIAEALKVNTTLTYLDLDSNQIGDAGAKVLAEALKGH 100

Query: 150 GMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQ 209
                L L        +  Q  E   +   +A   NS L+  D             ++NQ
Sbjct: 101 TTLTGLGL--------NTSQIGEVGAQAICEALKVNSTLTMLDL------------DANQ 140

Query: 210 SHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
             +   Q+   +LK    L  L+L  N  G  G + +A  L+ +    L++L L+ N +G
Sbjct: 141 IGDAGAQAIAQALKVNTTLTWLNLDGNQIGDAGAQAIAQALKVNS--TLKKLFLDANQIG 198

Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
             G + + +AL       K     + L++     N + + GA  +AA  K   TL  + +
Sbjct: 199 DAGAQAIGEAL-------KVNKRLIDLRL---SENHIGDAGANTIAAALKVNTTLTWLNL 248

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG-DC 387
            +N I +VG  A+++A + N  L  L L+ N I   GA  L  AL    ++  L+L  +C
Sbjct: 249 SENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALEVNTTMTKLHLDRNC 308

Query: 388 LLKSAGASSIAKYLTDNTTLE 408
           +    G S++     DN  LE
Sbjct: 309 M--DYGRSALLDVREDNCRLE 327



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL+ + +  N I   G  A+ +A + NK+L  L L++N I   GA  +  A
Sbjct: 177 IAQALKVNSTLKKLFLDANQIGDAGAQAIGEALKVNKRLIDLRLSENHIGDAGANTIAAA 236

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL +  + + GA +IA+ L  NTTL  + L  NEI   G  +L  A++  
Sbjct: 237 LKVNTTLTWLNLSENQIGNVGAEAIAEALKVNTTLAVLGLHTNEIGDDGACELADALEVN 296

Query: 122 TKLKQINVSEN 132
           T + ++++  N
Sbjct: 297 TTMTKLHLDRN 307


>gi|320170789|gb|EFW47688.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 585

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 177/398 (44%), Gaps = 45/398 (11%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           +  AGA +IA+ L  N  +E + L  N+I   G   + + +K    L+++++ +NQ GE+
Sbjct: 26  IDDAGAQAIAEGLKGNPNVEKLFLWGNQIGDAGARAIAETLKLDADLRKLDLYDNQIGED 85

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G   +   +K       L L D++                D+ A+     L  N +    
Sbjct: 86  GARAIADALKLNTTLTKLNLNDNQ--------------IGDAGAQAIAETLKVNTTMERL 131

Query: 198 NASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
             S      +NQ  +   Q+   +LK    L++++L +N  G  G + +A+ L+ +    
Sbjct: 132 CLS------ANQIGDAGAQALSAALKVNKTLIKIELWNNQIGDAGAQAIAETLKVNAT-- 183

Query: 257 LEELKLNNNGLGITGCKLLSKAL------------HDCYESSKKEGSPLALKVFIAGRN- 303
           L +L L+ N LG  G   +++ L            ++    +       ALKV  + R  
Sbjct: 184 LTQLTLDKNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVAEALKVNTSLRTL 243

Query: 304 ---RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
              ++ N GA+ +A V K + TL R+ M Q G       A+++A + N  L  L L+   
Sbjct: 244 HLGKIGNAGAQTMAEVLK-MNTLTRLSMCQIG--DAEAQAIAEALKVNTTLTDLRLDLGY 300

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I   GA  + ++L    +L  L+LG   +  AGA +IA+ +  N  L  + L  NEI   
Sbjct: 301 IGEAGANAIAKSLK---NLRYLHLGKNRIGDAGAQAIAEAVKVNNKLRFLVLDENEIGDA 357

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           G   +  A+K  + +  + + +NQ G+ G + + K+ K
Sbjct: 358 GAQAIAGALKVNSTMSWLYLEDNQIGDAGAQAINKVFK 395



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 166/373 (44%), Gaps = 21/373 (5%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +E + +  N I   G  A+++  + +  LR L+L DN I   GA  +  AL    +L  L
Sbjct: 44  VEKLFLWGNQIGDAGARAIAETLKLDADLRKLDLYDNQIGEDGARAIADALKLNTTLTKL 103

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL D  +  AGA +IA+ L  NTT+E + L+ N+I   G   L  A+K    L +I +  
Sbjct: 104 NLNDNQIGDAGAQAIAETLKVNTTMERLCLSANQIGDAGAQALSAALKVNKTLIKIELWN 163

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDE-GECSDEEQDEESEEENDSDAEGDNSNLSH 190
           NQ G+ G + + + +K       L L+ ++ G+       E  +      + G + N   
Sbjct: 164 NQIGDAGAQAIAETLKVNATLTQLTLDKNKLGDAGATTIAEMLQVNKILTSLGLDYN-QI 222

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELD----LSDNAFGPIGVEGLA 246
            D+  +  A     N S ++ +     +   +T A +++++    LS    G    + +A
Sbjct: 223 GDAGANAVAEALKVNTSLRTLHLGKIGNAGAQTMAEVLKMNTLTRLSMCQIGDAEAQAIA 282

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
           + L+ +    L +L+L+   +G  G   ++K+L +             L+    G+NR+ 
Sbjct: 283 EALKVNTT--LTDLRLDLGYIGEAGANAIAKSLKN-------------LRYLHLGKNRIG 327

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           + GA+ +A   K    L  + + +N I   G  A++ A + N  +  L L DN I   GA
Sbjct: 328 DAGAQAIAEAVKVNNKLRFLVLDENEIGDAGAQAIAGALKVNSTMSWLYLEDNQIGDAGA 387

Query: 367 IPLGQALSKLPSL 379
             + +     P L
Sbjct: 388 QAINKVFKMNPKL 400



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 60/301 (19%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L +L+L+DN  G  G + +A+ L+ +    +E L L+ N +G  G + LS AL
Sbjct: 93  ALKLNTTLTKLNLNDNQIGDAGAQAIAETLKVNTT--MERLCLSANQIGDAGAQALSAAL 150

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   + + ++++    N++ + GA+ +A   K   TL ++ + +N +   G T
Sbjct: 151 -------KVNKTLIKIELW---NNQIGDAGAQAIAETLKVNATLTQLTLDKNKLGDAGAT 200

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD------------- 386
            +++  + NK L  L L+ N I   GA  + +AL    SL  L+LG              
Sbjct: 201 TIAEMLQVNKILTSLGLDYNQIGDAGANAVAEALKVNTSLRTLHLGKIGNAGAQTMAEVL 260

Query: 387 ----------CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN----- 431
                     C +  A A +IA+ L  NTTL D+ L    I   G   + K++KN     
Sbjct: 261 KMNTLTRLSMCQIGDAEAQAIAEALKVNTTLTDLRLDLGYIGEAGANAIAKSLKNLRYLH 320

Query: 432 --------------------KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
                                 KL+ + + EN+ G+ G + +   +K     + L LED+
Sbjct: 321 LGKNRIGDAGAQAIAEAVKVNNKLRFLVLDENEIGDAGAQAIAGALKVNSTMSWLYLEDN 380

Query: 472 E 472
           +
Sbjct: 381 Q 381



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 7/180 (3%)

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
           +G+P   K+F+ G N++ + GA+ +A   K    L ++++  N I   G  A++DA + N
Sbjct: 39  KGNPNVEKLFLWG-NQIGDAGARAIAETLKLDADLRKLDLYDNQIGEDGARAIADALKLN 97

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L  LNLNDN I   GA  + + L    ++  L L    +  AGA +++  L  N TL 
Sbjct: 98  TTLTKLNLNDNQIGDAGAQAIAETLKVNTTMERLCLSANQIGDAGAQALSAALKVNKTLI 157

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG---VEEM---EKLMKSFGM 462
            + L  N+I   G   + + +K    L Q+ + +N+ G+ G   + EM    K++ S G+
Sbjct: 158 KIELWNNQIGDAGAQAIAETLKVNATLTQLTLDKNKLGDAGATTIAEMLQVNKILTSLGL 217



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 2/146 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+E + +  N I   G  ALS A + NK L  + L +N I   GA  + + 
Sbjct: 118 IAETLKVNTTMERLCLSANQIGDAGAQALSAALKVNKTLIKIELWNNQIGDAGAQAIAET 177

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    L  AGA++IA+ L  N  L  + L  N+I   G   + +A+K  
Sbjct: 178 LKVNATLTQLTLDKNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAGANAVAEALKVN 237

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L+ +++   + G  G + M +++K
Sbjct: 238 TSLRTLHLG--KIGNAGAQTMAEVLK 261



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + +  N I   G  A+++  + N  +  L L+ N I   GA  L  AL    +L  
Sbjct: 99  TLTKLNLNDNQIGDAGAQAIAETLKVNTTMERLCLSANQIGDAGAQALSAALKVNKTLIK 158

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           + L +  +  AGA +IA+ L  N TL  + L  N++   G   + + ++    L  + + 
Sbjct: 159 IELWNNQIGDAGAQAIAETLKVNATLTQLTLDKNKLGDAGATTIAEMLQVNKILTSLGLD 218

Query: 131 ENQFGEEGVEEMEKLMK 147
            NQ G+ G   + + +K
Sbjct: 219 YNQIGDAGANAVAEALK 235


>gi|125815593|ref|XP_001344236.1| PREDICTED: leucine-rich repeat-containing protein LOC400891-like
           [Danio rerio]
          Length = 440

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 12/251 (4%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           +SL T   +++L+L DN     G   +AD+L+ +C   + E+ L++N +G  G + LS  
Sbjct: 163 ISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENC--YITEIDLSDNRMGEYGARALSSM 220

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L         E S L   V ++G N L+   AK L+      + L+ +++  N +     
Sbjct: 221 L--------LENSTL-FSVNLSG-NHLDERAAKHLSPALISNQKLQHLDLSHNRLTDTAG 270

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             L  A  EN  L+ LNL  N I  KGAI   + L     L  ++L    L   GA ++ 
Sbjct: 271 EILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGKDGALALE 330

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L  N TLED+N++ N I  +G + L   +K  T L+ + +S N     G   + K ++
Sbjct: 331 EALKQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGCFAILKSVQ 390

Query: 459 SFGMAAALVLE 469
           S   +AA  L+
Sbjct: 391 SNPESAAEFLD 401



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 65/129 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  V +  N +       LS A   N+KL+HL+L+ N +T      LG A+++   L  
Sbjct: 226 TLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRLTDTAGEILGAAIAENTGLKA 285

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    ++  GA + AK L  N  L  V+L+ N +   G L L +A+K    L+ +N+S
Sbjct: 286 LNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGKDGALALEEALKQNNTLEDLNIS 345

Query: 131 ENQFGEEGV 139
            N+   EG 
Sbjct: 346 NNRIPFEGA 354



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 1/159 (0%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           + L+H+++  N +       L  A  EN  L+ LNL  N I  KGAI   + L     L 
Sbjct: 253 QKLQHLDLSHNRLTDTAGEILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLR 312

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            ++L    L   GA ++ + L  N TLED+N++ N I  +G + L   +K  T L+ + +
Sbjct: 313 SVDLSYNGLGKDGALALEEALKQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKM 372

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEE 168
           S N     G   + K ++S   +AA  L D    C D+E
Sbjct: 373 SRNPIQSAGCFAILKSVQSNPESAAEFL-DFSDICVDQE 410



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 68/146 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +  +++  N +   G  ALS    EN  L  +NL+ N +  + A  L  A
Sbjct: 189 IADMLKENCYITEIDLSDNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPA 248

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L    L       +   + +NT L+ +NL  N I  +G +   K ++  
Sbjct: 249 LISNQKLQHLDLSHNRLTDTAGEILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGN 308

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L+ +++S N  G++G   +E+ +K
Sbjct: 309 IFLRSVDLSYNGLGKDGALALEEALK 334



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V M   G+   G  AL+ +   N  +  LNL DN +   GA  +   L +   +  ++L 
Sbjct: 146 VNMMHCGLGAQGTKALAISLVTNTSILKLNLRDNWMEGAGAAAIADMLKENCYITEIDLS 205

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           D  +   GA +++  L +N+TL  VNL+ N +  +    L  A+ +  KL+ +++S N+ 
Sbjct: 206 DNRMGEYGARALSSMLLENSTLFSVNLSGNHLDERAAKHLSPALISNQKLQHLDLSHNRL 265



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 60/120 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L A   +   L+ + +  N I   G  A +   E N  LR ++L+ N +   GA+ L +
Sbjct: 272 ILGAAIAENTGLKALNLAWNCIRGKGAIAFAKGLEGNIFLRSVDLSYNGLGKDGALALEE 331

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL +  +L  LN+ +  +   GA  +A  L  NTTL  + ++ N I   G   ++K++++
Sbjct: 332 ALKQNNTLEDLNISNNRIPFEGAVHLALGLKVNTTLRILKMSRNPIQSAGCFAILKSVQS 391



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N +   G  A++D  +EN  +  ++L+DN +   GA  L   L +  +L  +NL    L 
Sbjct: 179 NWMEGAGAAAIADMLKENCYITEIDLSDNRMGEYGARALSSMLLENSTLFSVNLSGNHLD 238

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
              A  ++  L  N  L+ ++L+ N ++   G  L  A+   T LK +N++ N
Sbjct: 239 ERAAKHLSPALISNQKLQHLDLSHNRLTDTAGEILGAAIAENTGLKALNLAWN 291


>gi|389750344|gb|EIM91515.1| RNI-like protein [Stereum hirsutum FP-91666 SS1]
          Length = 430

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 104/222 (46%), Gaps = 18/222 (8%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LVELDLS+NA G   V+ L  LL  +    +E LKLNNNG G     +++ AL +    S
Sbjct: 98  LVELDLSNNAIGARVVDILVPLLTQN--RHIEVLKLNNNGFGPEAGTIVANALIEAARLS 155

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
              G    L+V + GRNRLENE A   A  F     L++VE+  NGI   G  A+     
Sbjct: 156 TNLGQASQLRVVMCGRNRLENESATAWARAFAAHPNLQQVELQNNGIREEGFGAILRGLA 215

Query: 347 ENKNLRHLNLNDNTIT--------------YKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
              +LR+LNL DN                 + G   L + L  +  L  L+L DC L + 
Sbjct: 216 CCGDLRYLNLRDNNSMDAYPGIDFAMSEREHHGWQALKELLPAVRKLRFLDLSDCGLNAP 275

Query: 393 GASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           G+ ++   L D     LE + L  N+I      DLV  + ++
Sbjct: 276 GSMALVHALADGHQKELETLLLENNDIVDNVYKDLVSVLSDR 317


>gi|195997527|ref|XP_002108632.1| hypothetical protein TRIADDRAFT_51747 [Trichoplax adhaerens]
 gi|190589408|gb|EDV29430.1| hypothetical protein TRIADDRAFT_51747 [Trichoplax adhaerens]
          Length = 574

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 12/234 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L    ++  L ++DN     G + +A++L+ +    + EL +++N +G  G    +K L
Sbjct: 215 ALLNNTKVERLIVADNYIKEDGAQAIAEMLQENMY--IRELNISDNFIGSEGANAFAKML 272

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      S   L+  I   N + ++ A   A   K   TL  +++  N    +G  
Sbjct: 273 F----------SNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGELGAI 322

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           +L++   EN NL  ++L+ N+I  +G + L ++L    +L  LNL    +   GA ++AK
Sbjct: 323 SLANGIAENGNLDVMDLSWNSIRGRGGVALAKSLRLNTTLVSLNLAWNGISDVGAFALAK 382

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           +L  NTTL+ ++++ N I   G + L K +     L    +S N  G +GVE +
Sbjct: 383 FLRKNTTLQRLDISNNRIGEIGAIKLGKCLGVNNALTHFKISTNPVGNKGVEAI 436



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 72/141 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A   K   TL ++++  N    +G  +L++   EN  L  ++L+ N+I  +G + L ++
Sbjct: 296 FAGALKANTTLSYLDLSHNEFGELGAISLANGIAENGNLDVMDLSWNSIRGRGGVALAKS 355

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL    +   GA ++AK+L  NTTL+ ++++ N I   G + L K +   
Sbjct: 356 LRLNTTLVSLNLAWNGISDVGAFALAKFLRKNTTLQRLDISNNRIGEIGAIKLGKCLGVN 415

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             L    +S N  G +GVE +
Sbjct: 416 NALTHFKISTNPVGNKGVEAI 436



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + +  N I        + A + N  L +L+L+ N     GAI L   +++  +L +
Sbjct: 277 TLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEFGELGAISLANGIAENGNLDV 336

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           ++L    ++  G  ++AK L  NTTL  +NL  N IS  G   L K ++  T L+++++S
Sbjct: 337 MDLSWNSIRGRGGVALAKSLRLNTTLVSLNLAWNGISDVGAFALAKFLRKNTTLQRLDIS 396

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALV 156
            N+ GE G     KL K  G+  AL 
Sbjct: 397 NNRIGEIGA---IKLGKCLGVNNALT 419



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 62/124 (50%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           + M  +G+   G   L+ A   N K+  L + DN I   GA  + + L +   +  LN+ 
Sbjct: 197 IIMKHHGLGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENMYIRELNIS 256

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           D  + S GA++ AK L  NTTL  + +  N I+ Q       A+K  T L  +++S N+F
Sbjct: 257 DNFIGSEGANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEF 316

Query: 135 GEEG 138
           GE G
Sbjct: 317 GELG 320



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 61/124 (49%)

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + M  +G+   G   L+ A   N  +  L + DN I   GA  + + L +   +  LN+ 
Sbjct: 197 IIMKHHGLGPKGAIPLAYALLNNTKVERLIVADNYIKEDGAQAIAEMLQENMYIRELNIS 256

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           D  + S GA++ AK L  NTTL  + +  N I+ Q       A+K  T L  +++S N+F
Sbjct: 257 DNFIGSEGANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSHNEF 316

Query: 446 GEEG 449
           GE G
Sbjct: 317 GELG 320



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 144/349 (41%), Gaps = 51/349 (14%)

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
           +E   G   DE   +  + E+  + E +  N S      + ++ N    N NQ   +S  
Sbjct: 84  VEKINGNHQDEITPQSPKNESVEEPESNPLNESQKSVKWAWSSGNDKKENDNQE--SSAT 141

Query: 217 SHMSLKTGARLVELD------------------LSDNAFGPIGVEGLADLLRSSCCFALE 258
            H++   G   VE++                  L ++    I V   + LLR    F   
Sbjct: 142 DHLTSVLGNMKVEIEDVGDKYDDSDDSDDWDTDLEEDFKRVIPV---SYLLRH---FHES 195

Query: 259 ELKLNNNGLGITGCKLLSKAL-----------HDCYESSKKEGSP---------LALKVF 298
            + + ++GLG  G   L+ AL            D Y   K++G+          + ++  
Sbjct: 196 AIIMKHHGLGPKGAIPLAYALLNNTKVERLIVADNY--IKEDGAQAIAEMLQENMYIREL 253

Query: 299 IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND 358
               N + +EGA   A +     TL  + +  N I        + A + N  L +L+L+ 
Sbjct: 254 NISDNFIGSEGANAFAKMLFSNTTLRTLIIKGNHITDQNAATFAGALKANTTLSYLDLSH 313

Query: 359 NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           N     GAI L   +++  +L +++L    ++  G  ++AK L  NTTL  +NL  N IS
Sbjct: 314 NEFGELGAISLANGIAENGNLDVMDLSWNSIRGRGGVALAKSLRLNTTLVSLNLAWNGIS 373

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 467
             G   L K ++  T L+++++S N+ GE G     KL K  G+  AL 
Sbjct: 374 DVGAFALAKFLRKNTTLQRLDISNNRIGEIGA---IKLGKCLGVNNALT 419



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N I   G  AL+ +   N  L  LNL  N I+  GA  L + L K  +L  L
Sbjct: 334 LDVMDLSWNSIRGRGGVALAKSLRLNTTLVSLNLAWNGISDVGAFALAKFLRKNTTLQRL 393

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           ++ +  +   GA  + K L  N  L    ++ N +  +G   ++   KN   LK + + E
Sbjct: 394 DISNNRIGEIGAIKLGKCLGVNNALTHFKISTNPVGNKGVEAILNGAKNNDLLKVLGLEE 453

Query: 132 NQFGEEGVEEMEKLM 146
                +  +E+E+LM
Sbjct: 454 ITVSRKMHDEIEELM 468


>gi|332845208|ref|XP_001167492.2| PREDICTED: protein NLRC3 [Pan troglodytes]
          Length = 1057

 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 189/425 (44%), Gaps = 47/425 (11%)

Query: 39   KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            +++ ++L +N I+ KGA  L ++L    SL  L+L    +   G+ ++A  L  N TL  
Sbjct: 667  RIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTS 726

Query: 99   VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
            ++L  N +   G   + +A+ +   L  +++ +N  G  G + M                
Sbjct: 727  LSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRM---------------- 770

Query: 159  DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
                  +D  +   S +E  +   G         S  SH     S   S QS++ S+   
Sbjct: 771  ------ADALKQNRSLKELMAAPSG---------SWDSHTQGASSSFRSLQSNSISDAGV 815

Query: 219  MSLK----TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
             +L     T   L+ L L +N+  P G + +A  LR++    L+ L L  N L   G + 
Sbjct: 816  AALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANS--TLKNLDLTANLLHDQGARA 873

Query: 275  LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
            ++ A+ +      +  + L L+      N ++   A+ L    +  ++L  +++ +N I 
Sbjct: 874  IAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQALGQALQLNRSLTSLDLQENAIG 923

Query: 335  HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
              G  A++ A + N  L  L L   +I   GA  LG+AL+   +L IL+L    +  AGA
Sbjct: 924  DDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGA 983

Query: 395  SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
             ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+  N  G+ G   + 
Sbjct: 984  KALAHALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMIS 1043

Query: 455  KLMKS 459
            + +K+
Sbjct: 1044 EAIKT 1048



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 174/422 (41%), Gaps = 69/422 (16%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +G+  L  AL    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGSKALADALKINRTLTSL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++  + 
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMAAP 787

Query: 132  NQFGE---EGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD---- 184
            +   +   +G     + ++S  ++ A V       C+++     S  EN    EG     
Sbjct: 788  SGSWDSHTQGASSSFRSLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIA 847

Query: 185  -----NSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------K 222
                 NS L + D  +N  H+   ++   + + + T    H+                 +
Sbjct: 848  HALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQ 907

Query: 223  TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
                L  LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++L +AL   
Sbjct: 908  LNRSLTSLDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQVLGEAL--- 962

Query: 283  YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
                                NR                 TLE +++  N I   G  AL+
Sbjct: 963  ------------------AVNR-----------------TLEILDLRGNAIGVAGAKALA 987

Query: 343  DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
             A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ + 
Sbjct: 988  HALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIK 1047

Query: 403  DN 404
             N
Sbjct: 1048 TN 1049



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 910  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 969

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 970  ILDLRGNAIGVAGAKALAHALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1029

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  G+ G   + + +K+
Sbjct: 1030 QGNHIGDSGARMISEAIKT 1048



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 154/384 (40%), Gaps = 51/384 (13%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 694  RSLTSLDLRGNSIGPQGSKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDV--------------------NLTCNEISVQ 109
            +L+L    +   GA  +A  L  N +L+++                    +L  N IS  
Sbjct: 754  MLHLQKNSIGPMGAQRMADALKQNRSLKELMAAPSGSWDSHTQGASSSFRSLQSNSISDA 813

Query: 110  GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQ 169
            G   L+ A+     L  +++ EN    EG + +   +++      L          D   
Sbjct: 814  GVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALRANSTLKNL----------DLTA 863

Query: 170  DEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVE 229
            +   ++   + A     N +    +   N        +       N+S         L  
Sbjct: 864  NLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRS---------LTS 914

Query: 230  LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
            LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++L +AL          
Sbjct: 915  LDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQVLGEAL---------- 962

Query: 290  GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
                 L++     N +   GAK LA   K   +L R+ + +N +   G   ++ A   N 
Sbjct: 963  AVNRTLEILDLRGNAIGVAGAKALAHALKVNSSLRRLNLQENSLGMDGAICIATALSGNH 1022

Query: 350  NLRHLNLNDNTITYKGAIPLGQAL 373
             L+H+NL  N I   GA  + +A+
Sbjct: 1023 RLQHINLQGNHIGDSGARMISEAI 1046



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 874  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 933

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 934  LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALAHALKVN 993

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 994  SSLRRLNLQENSLGMDG 1010



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 45/84 (53%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL+ A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 966  RTLEILDLRGNAIGVAGAKALAHALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQ 1025

Query: 70   ILNLGDCLLKSAGASSIAKYLTDN 93
             +NL    +  +GA  I++ +  N
Sbjct: 1026 HINLQGNHIGDSGARMISEAIKTN 1049


>gi|320164804|gb|EFW41703.1| hypothetical protein CAOG_06835 [Capsaspora owczarzaki ATCC 30864]
          Length = 1217

 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 125/236 (52%), Gaps = 15/236 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA---LEELKLNNNGLGITGCKLLS 276
           +L+    L++L+L     G  G + +A+ L+ +       L  ++L NN +G  G + L+
Sbjct: 44  ALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLSTIQLFNNQIGDVGAQALA 103

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
           +AL         E +    ++ + G N++   GA+ +A   +   TL ++ +  N +   
Sbjct: 104 EAL---------EVNTTLTQLDLHG-NQIGEVGAQAIAEALEVNTTLTKLILSDNQVGDA 153

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G  ++S A ++N  L++L+L  N I   GA+ + +AL K  +L ILNL    +  AGA S
Sbjct: 154 GALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWLNQIGDAGALS 213

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG--EEGV 450
           +++ L  NTTL+++NL  N+I   G L + +A++  T L+ +N+  NQ G  EE V
Sbjct: 214 LSEALQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLNLEFNQIGYVEETV 269



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           EL LS    G +  + +A+ L  +    L +L L +  +G  G K +++AL         
Sbjct: 25  ELLLSWCKIGDVEAQAIAEALEVNTT--LIKLNLLSGQIGDAGAKAIAEAL-----KVNT 77

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             + L L       N++ + GA+ LA   +   TL ++++  N I  VG  A+++A E N
Sbjct: 78  TLTQLHLSTIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVN 137

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L  L L+DN +   GA+ + +AL K   L  L+L    +  AGA SI++ L  NTTL+
Sbjct: 138 TTLTKLILSDNQVGDAGALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQ 197

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            +NL  N+I   G L L +A++  T L+ +N+  NQ G  G
Sbjct: 198 ILNLWLNQIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAG 238



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 72/128 (56%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++  N I  VG  A+++A E N  L  L L+DN +   GA+ + +AL K   L  
Sbjct: 111 TLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLILSDNQVGDAGALSISKALQKNTILQN 170

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    +  AGA SI++ L  NTTL+ +NL  N+I   G L L +A++  T L+ +N+ 
Sbjct: 171 LSLASNQIGDAGALSISEALQKNTTLQILNLWLNQIGDAGALSLSEALQKNTTLQNLNLW 230

Query: 131 ENQFGEEG 138
            NQ G  G
Sbjct: 231 LNQIGNAG 238



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 2/131 (1%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + +  N +   G  ++S A ++N  L++L+L  N I   GA+ + +AL K  +L I
Sbjct: 139 TLTKLILSDNQVGDAGALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQI 198

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    +  AGA S+++ L  NTTL+++NL  N+I   G L + +A++  T L+ +N+ 
Sbjct: 199 LNLWLNQIGDAGALSLSEALQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLNLE 258

Query: 131 ENQFG--EEGV 139
            NQ G  EE V
Sbjct: 259 FNQIGYVEETV 269



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 71/127 (55%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N I  VG  AL++A E N  L  L+L+ N I   GA  + +AL    +L  L
Sbjct: 84  LSTIQLFNNQIGDVGAQALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKL 143

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            L D  +  AGA SI+K L  NT L++++L  N+I   G L + +A++  T L+ +N+  
Sbjct: 144 ILSDNQVGDAGALSISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWL 203

Query: 132 NQFGEEG 138
           NQ G+ G
Sbjct: 204 NQIGDAG 210



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 62/105 (59%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++   +K   L+++ +  N I   G  ++S+A ++N  L+ LNL  N I   GA+ L +A
Sbjct: 158 ISKALQKNTILQNLSLASNQIGDAGALSISEALQKNTTLQILNLWLNQIGDAGALSLSEA 217

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 106
           L K  +L  LNL    + +AGA SI++ L  NTTL+++NL  N+I
Sbjct: 218 LQKNTTLQNLNLWLNQIGNAGALSISEALQKNTTLQNLNLEFNQI 262



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC-----NEISVQGGL 112
           + +AL    +L  LNL    +  AGA +IA+ L  NTTL  ++L+      N+I   G  
Sbjct: 41  IAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLSTIQLFNNQIGDVGAQ 100

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
            L +A++  T L Q+++  NQ GE G + + + ++       L+L D++
Sbjct: 101 ALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLILSDNQ 149



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC-----NEISVQGGL 423
           + +AL    +L  LNL    +  AGA +IA+ L  NTTL  ++L+      N+I   G  
Sbjct: 41  IAEALEVNTTLIKLNLLSGQIGDAGAKAIAEALKVNTTLTQLHLSTIQLFNNQIGDVGAQ 100

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            L +A++  T L Q+++  NQ GE G + + + ++       L+L D++
Sbjct: 101 ALAEALEVNTTLTQLDLHGNQIGEVGAQAIAEALEVNTTLTKLILSDNQ 149


>gi|281201481|gb|EFA75690.1| hypothetical protein PPL_10743 [Polysphondylium pallidum PN500]
          Length = 614

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 194/451 (43%), Gaps = 61/451 (13%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           L TL  +++  N   +  +  L+D  + NK +  LNL +N +  KG   +  AL++   L
Sbjct: 102 LDTLTTIDLRNNPNTNSIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANALARNTHL 161

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             L+LG  +L + G +SIA+ +  N TL  ++L  N++S +G   +V+A+K    LK + 
Sbjct: 162 LHLDLGLNMLGANGGNSIAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVNKSLKYLV 221

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           +  NQ  +E            G+  A VL  ++G       D E          G  S +
Sbjct: 222 LHSNQLRDE-----------CGLPLADVLRQNQGFVVLGLNDNEI---------GAKSGV 261

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
           +                           + M LKT   LV++D   N  G  G   +AD 
Sbjct: 262 A--------------------------LARM-LKTVKSLVQIDFGKNELGDDGGLAMADT 294

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           ++++       L  N  G         +  L+             ++       N +  E
Sbjct: 295 IKTNKSIKSINLSWNKLGAKAAKAIADAIKLNT------------SITTLDLSFNNIGAE 342

Query: 309 GAKMLAAVFKKLKTLERVEMPQ-NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           G   LAA     +++  V++ + +     G  AL++A + N+ + HL+LN++ ++ +  I
Sbjct: 343 GLSSLAASLATNQSIHTVDLSRVSASTPDGHIALANALKTNRIISHLDLNNSKLSDEAGI 402

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
            + Q+L +  +++ L L +    ++    ++  LT N +L  + L    + ++G   L +
Sbjct: 403 AIAQSLIENKTISTLVLSNNPFGASAIKELSSALTKNRSLATLYLAA-SVKIEGVEPLFE 461

Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           A+   + L  ++++ NQFG EG   + K +K
Sbjct: 462 ALSQNSTLTTLDLANNQFGAEGGAMIAKHLK 492



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 199/453 (43%), Gaps = 45/453 (9%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   KK  TL H+++  N +   G   + +A + NK L++L L+ N +  +  +PL   
Sbjct: 179 IAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVNKSLKYLVLHSNQLRDECGLPLADV 238

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +     +L L D  + +    ++A+ L    +L  ++   NE+   GGL +   +K  
Sbjct: 239 LRQNQGFVVLGLNDNEIGAKSGVALARMLKTVKSLVQIDFGKNELGDDGGLAMADTIKTN 298

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             +K IN+S N+ G +  + +   +K       L L                   N+  A
Sbjct: 299 KSIKSINLSWNKLGAKAAKAIADAIKLNTSITTLDL-----------------SFNNIGA 341

Query: 182 EGDNS---NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
           EG +S   +L+ N S H+ + S  S +  +     +N    +LKT   +  LDL+++   
Sbjct: 342 EGLSSLAASLATNQSIHTVDLSRVSASTPDGHIALAN----ALKTNRIISHLDLNNSKLS 397

Query: 239 -PIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
              G+     L+ +     +  L L+NN  G +  K LS AL         +   LA  +
Sbjct: 398 DEAGIAIAQSLIENKT---ISTLVLSNNPFGASAIKELSSAL--------TKNRSLA-TL 445

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
           ++A   ++  EG + L     +  TL  +++  N     G   ++   ++ K+L  L++ 
Sbjct: 446 YLAASVKI--EGVEPLFEALSQNSTLTTLDLANNQFGAEGGAMIAKHLKQCKHLLELSIQ 503

Query: 358 DNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
           +N +     +   Q L  +P SL  ++L + L+  +  +S+A  L  +  L  +N++ N+
Sbjct: 504 NNQL----GVSANQILDSIPQSLQCIDLSNNLIMPSSGTSLANALQKD-QLSKLNISQNK 558

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +       LV+A+   T L  I +  NQF ++ 
Sbjct: 559 LDDDNSQPLVQALSKTTALVHIQIIANQFTKQA 591



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 2/154 (1%)

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
           L TL  +++  N   +  +  L+D  + NK++  LNL +N +  KG   +  AL++   L
Sbjct: 102 LDTLTTIDLRNNPNTNSIVDRLADNLKTNKSITSLNLYNNRLMQKGGTSIANALARNTHL 161

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
             L+LG  +L + G +SIA+ +  N TL  ++L  N++S +G   +V+A+K    LK + 
Sbjct: 162 LHLDLGLNMLGANGGNSIAEAMKKNNTLTHLDLASNQLSFRGAGPIVEALKVNKSLKYLV 221

Query: 440 VSENQFGEE-GVEEMEKLMKSFGMAAALVLEDDE 472
           +  NQ  +E G+   + L ++ G    L L D+E
Sbjct: 222 LHSNQLRDECGLPLADVLRQNQGF-VVLGLNDNE 254



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 77/157 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NRL  +G   +A    +   L  +++  N +   G  ++++A ++N  L HL+L  N ++
Sbjct: 141 NRLMQKGGTSIANALARNTHLLHLDLGLNMLGANGGNSIAEAMKKNNTLTHLDLASNQLS 200

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
           ++GA P+ +AL    SL  L L    L+      +A  L  N     + L  NEI  + G
Sbjct: 201 FRGAGPIVEALKVNKSLKYLVLHSNQLRDECGLPLADVLRQNQGFVVLGLNDNEIGAKSG 260

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L + +K    L QI+  +N+ G++G   M   +K+
Sbjct: 261 VALARMLKTVKSLVQIDFGKNELGDDGGLAMADTIKT 297


>gi|328866540|gb|EGG14924.1| hypothetical protein DFA_10798 [Dictyostelium fasciculatum]
          Length = 760

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 196/446 (43%), Gaps = 28/446 (6%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + +  N I   G  +L++A + NK +  LN + N +  +G +   + L    SL  
Sbjct: 327 TLLSLNLSVNEIRQDGSVSLANALKVNKSITLLNYSYNLLGEQGTMAFSEMLIYNKSLTH 386

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    +  +   +I   L+ NTTL+ +NL  N I   G   +   + N   L  IN S
Sbjct: 387 LNLSANKITFSNTPTITLALSKNTTLKSLNLLRNMIDPIGCQYIANGLANNQSLTSINFS 446

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N+ G +G   + K            L  ++G  + +E D  S    D  A    + + +
Sbjct: 447 SNKLGNQGSTSISK-----------ALAINKGS-AIKELDLSSNCIEDQGAAAFANVIIY 494

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTG-ARLVELDLSDNAFGPIGVEGLADLL 249
           N S  + + S     N   S+     +   L+   + +  ++LS N   P+G + LA+ L
Sbjct: 495 NQSVTTLDLSV----NWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLGAKHLAEAL 550

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
                 +L  + L +N +   G   LSKAL      +  E S           N + NEG
Sbjct: 551 MHPDS-SLHHINLFSNYIETEGAFELSKALATNTSITSIELSA----------NLIGNEG 599

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            K L+       +++ + + Q+ + + GI  + +    N  +R+L+L+ N I  +GA  L
Sbjct: 600 VKYLSRALLTNVSIKSISLSQSLLSYEGIQHIVELMSVNTTIRYLDLSYNIIGSRGAQEL 659

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            +AL +  ++  L+L    L   GA++IA     NTTL+ ++L  N+I   G   +V+ +
Sbjct: 660 SRALLQNKTITSLDLSSNSLGDEGATAIADIFPINTTLQRLSLYNNKIGTDGAKHIVRNL 719

Query: 430 KNKTKLKQINVSENQFGEEGVEEMEK 455
                L  IN+  N+   + ++ + K
Sbjct: 720 SKNHTLFSINLLANRIDTQCLKPILK 745



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 167/384 (43%), Gaps = 62/384 (16%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           +  + A  +A+ L  N TL  +NL+ NEI   G + L  A+K    +  +N S N  GE+
Sbjct: 310 ISDSAAKILAESLETNDTLLSLNLSVNEIRQDGSVSLANALKVNKSITLLNYSYNLLGEQ 369

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G     ++                                          L +N S    
Sbjct: 370 GTMAFSEM------------------------------------------LIYNKSLTHL 387

Query: 198 NASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
           N S      SN    T     ++L     L  L+L  N   PIG + +A+ L ++   +L
Sbjct: 388 NLSANKITFSNTPTIT-----LALSKNTTLKSLNLLRNMIDPIGCQYIANGLANNQ--SL 440

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
             +  ++N LG  G   +SKAL      +  +GS  A+K      N +E++GA   A V 
Sbjct: 441 TSINFSSNKLGNQGSTSISKAL------AINKGS--AIKELDLSSNCIEDQGAAAFANVI 492

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKN--LRHLNLNDNTITYKGAIPLGQALSK 375
              +++  +++  N I   G+  L+ AF EN    +  +NL+ NTI   GA  L +AL  
Sbjct: 493 IYNQSVTTLDLSVNWIDSNGVIRLAQAFLENPKSPITSINLSCNTICPLGAKHLAEALMH 552

Query: 376 LP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            P  SL  +NL    +++ GA  ++K L  NT++  + L+ N I  +G   L +A+    
Sbjct: 553 -PDSSLHHINLFSNYIETEGAFELSKALATNTSITSIELSANLIGNEGVKYLSRALLTNV 611

Query: 434 KLKQINVSENQFGEEGVEEMEKLM 457
            +K I++S++    EG++ + +LM
Sbjct: 612 SIKSISLSQSLLSYEGIQHIVELM 635



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 184/424 (43%), Gaps = 36/424 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  K++  +    N +   G  A S+    NK L HLNL+ N IT+     +  A
Sbjct: 346 LANALKVNKSITLLNYSYNLLGEQGTMAFSEMLIYNKSLTHLNLSANKITFSNTPTITLA 405

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-N 120
           LSK  +L  LNL   ++   G   IA  L +N +L  +N + N++  QG   + KA+  N
Sbjct: 406 LSKNTTLKSLNLLRNMIDPIGCQYIANGLANNQSLTSINFSSNKLGNQGSTSISKALAIN 465

Query: 121 K-TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
           K + +K++++S N   ++G      ++        L L  +  + +   +  ++  EN  
Sbjct: 466 KGSAIKELDLSSNCIEDQGAAAFANVIIYNQSVTTLDLSVNWIDSNGVIRLAQAFLENP- 524

Query: 180 DAEGDNSNLSHNDS---NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
            +   + NLS N        H A    H +S+  H                  ++L  N 
Sbjct: 525 KSPITSINLSCNTICPLGAKHLAEALMHPDSSLHH------------------INLFSNY 566

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
               G   L+  L ++   ++  ++L+ N +G  G K LS+AL           + +++K
Sbjct: 567 IETEGAFELSKALATNT--SITSIELSANLIGNEGVKYLSRALL----------TNVSIK 614

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
                ++ L  EG + +  +     T+  +++  N I   G   LS A  +NK +  L+L
Sbjct: 615 SISLSQSLLSYEGIQHIVELMSVNTTIRYLDLSYNIIGSRGAQELSRALLQNKTITSLDL 674

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
           + N++  +GA  +        +L  L+L +  + + GA  I + L+ N TL  +NL  N 
Sbjct: 675 SSNSLGDEGATAIADIFPINTTLQRLSLYNNKIGTDGAKHIVRNLSKNHTLFSINLLANR 734

Query: 417 ISVQ 420
           I  Q
Sbjct: 735 IDTQ 738


>gi|281203588|gb|EFA77785.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
           PN500]
          Length = 602

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 171/418 (40%), Gaps = 59/418 (14%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           + H+NL  N I   G + L QAL    S+  L L  C L +     +A  L  NTTL ++
Sbjct: 225 ITHINLFSNQIGDLGLLKLVQALHYNSSVTFLGLSYCNLTARSGEPLANLLAKNTTLREL 284

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
            L+ N +   G +     +     L+ +++S N+ G++G +E+           AL L  
Sbjct: 285 ILSYNALGSSGAVSFAAGLAKNKSLRSLSLSHNELGDDGTKEI-----------ALSL-- 331

Query: 160 DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM 219
                S++   E +   N   +EG                              SN    
Sbjct: 332 ----ASNQSLSELNLRCNSISSEG------------------------------SNYIST 357

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL+    +VE+DL  N  G  G   +   L  S   +L+ + L  N +   G   ++ AL
Sbjct: 358 SLQINKSIVEIDLWGNNIGDYGATKIGVAL--SLNHSLKSINLTRNCIQ-QGIGSIASAL 414

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
             C  SSK     L+        N L   GA  +A + +   ++E + +  N     GI 
Sbjct: 415 --CSASSKITTIDLS-------ANALGAIGAIEIAKIIRATTSIESMTLSSNKFESNGIQ 465

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            ++ A   NK++R LNL  N I  +GA  L +++    ++   +L    L + G  +I +
Sbjct: 466 HIAQAISNNKSIRRLNLATNEIGVEGARYLAESIKLNSTIVYFDLAMNQLGNEGTKAITE 525

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            L  N +++ + L+ N+I ++G   ++  + +   +  IN+  N    +     +K +
Sbjct: 526 ALEYNKSIKTIVLSHNQIDIEGVQSILTLLNSNRTISVINLEGNHLAPDTQRLFQKFI 583



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 167/373 (44%), Gaps = 31/373 (8%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           + H+ +  N I  +G+  L  A   N  +  L L+   +T +   PL   L+K  +L  L
Sbjct: 225 ITHINLFSNQIGDLGLLKLVQALHYNSSVTFLGLSYCNLTARSGEPLANLLAKNTTLREL 284

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            L    L S+GA S A  L  N +L  ++L+ NE+   G  ++  ++ +   L ++N+  
Sbjct: 285 ILSYNALGSSGAVSFAAGLAKNKSLRSLSLSHNELGDDGTKEIALSLASNQSLSELNLRC 344

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           N    EG   +     S  +  ++V           E D       D  A      LS  
Sbjct: 345 NSISSEGSNYIS---TSLQINKSIV-----------EIDLWGNNIGDYGATKIGVALSL- 389

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             NHS  + N + N   Q   +   +  S    +++  +DLS NA G IG   +A ++R+
Sbjct: 390 --NHSLKSINLTRNCIQQGIGSIASALCS--ASSKITTIDLSANALGAIGAIEIAKIIRA 445

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           +   ++E + L++N     G + +++A+     S+ K    L L       N +  EGA+
Sbjct: 446 TT--SIESMTLSSNKFESNGIQHIAQAI-----SNNKSIRRLNL-----ATNEIGVEGAR 493

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            LA   K   T+   ++  N + + G  A+++A E NK+++ + L+ N I  +G   +  
Sbjct: 494 YLAESIKLNSTIVYFDLAMNQLGNEGTKAITEALEYNKSIKTIVLSHNQIDIEGVQSILT 553

Query: 372 ALSKLPSLAILNL 384
            L+   +++++NL
Sbjct: 554 LLNSNRTISVINL 566



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L EL LS NA G  G    A  L  +   +L  L L++N LG  G K ++ +L     +S
Sbjct: 281 LRELILSYNALGSSGAVSFAAGLAKNK--SLRSLSLSHNELGDDGTKEIALSL-----AS 333

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            +  S L L+      N + +EG+  ++   +  K++  +++  N I   G T +  A  
Sbjct: 334 NQSLSELNLRC-----NSISSEGSNYISTSLQINKSIVEIDLWGNNIGDYGATKIGVALS 388

Query: 347 ENKNLRHLNLNDNTITYK----------------------------GAIPLGQALSKLPS 378
            N +L+ +NL  N I                               GAI + + +    S
Sbjct: 389 LNHSLKSINLTRNCIQQGIGSIASALCSASSKITTIDLSANALGAIGAIEIAKIIRATTS 448

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           +  + L     +S G   IA+ +++N ++  +NL  NEI V+G   L +++K  + +   
Sbjct: 449 IESMTLSSNKFESNGIQHIAQAISNNKSIRRLNLATNEIGVEGARYLAESIKLNSTIVYF 508

Query: 439 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           +++ NQ G EG + + + ++       +VL  ++
Sbjct: 509 DLAMNQLGNEGTKAITEALEYNKSIKTIVLSHNQ 542



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 24/245 (9%)

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS------------KKEGSPLA-- 294
           L SS   A+  + L +N +G  G   L +ALH  Y SS             + G PLA  
Sbjct: 217 LLSSPSSAITHINLFSNQIGDLGLLKLVQALH--YNSSVTFLGLSYCNLTARSGEPLANL 274

Query: 295 ------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
                 L+  I   N L + GA   AA   K K+L  + +  N +   G   ++ +   N
Sbjct: 275 LAKNTTLRELILSYNALGSSGAVSFAAGLAKNKSLRSLSLSHNELGDDGTKEIALSLASN 334

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
           ++L  LNL  N+I+ +G+  +  +L    S+  ++L    +   GA+ I   L+ N +L+
Sbjct: 335 QSLSELNLRCNSISSEGSNYISTSLQINKSIVEIDLWGNNIGDYGATKIGVALSLNHSLK 394

Query: 409 DVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 467
            +NLT N I  QG   +  A+    +K+  I++S N  G  G  E+ K++++     ++ 
Sbjct: 395 SINLTRNCIQ-QGIGSIASALCSASSKITTIDLSANALGAIGAIEIAKIIRATTSIESMT 453

Query: 468 LEDDE 472
           L  ++
Sbjct: 454 LSSNK 458



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 79/152 (51%), Gaps = 2/152 (1%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +L+ + + +N I   GI +++ A    + K+  ++L+ N +   GAI + + +    S+ 
Sbjct: 392 SLKSINLTRNCIQQ-GIGSIASALCSASSKITTIDLSANALGAIGAIEIAKIIRATTSIE 450

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            + L     +S G   IA+ +++N ++  +NL  NEI V+G   L +++K  + +   ++
Sbjct: 451 SMTLSSNKFESNGIQHIAQAISNNKSIRRLNLATNEIGVEGARYLAESIKLNSTIVYFDL 510

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           + NQ G EG + + + ++       +VL  ++
Sbjct: 511 AMNQLGNEGTKAITEALEYNKSIKTIVLSHNQ 542



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 68/145 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + +   ++E + +  N     GI  ++ A   NK +R LNL  N I  +GA  L ++
Sbjct: 439 IAKIIRATTSIESMTLSSNKFESNGIQHIAQAISNNKSIRRLNLATNEIGVEGARYLAES 498

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +    ++   +L    L + G  +I + L  N +++ + L+ N+I ++G   ++  + + 
Sbjct: 499 IKLNSTIVYFDLAMNQLGNEGTKAITEALEYNKSIKTIVLSHNQIDIEGVQSILTLLNSN 558

Query: 122 TKLKQINVSENQFGEEGVEEMEKLM 146
             +  IN+  N    +     +K +
Sbjct: 559 RTISVINLEGNHLAPDTQRLFQKFI 583



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 2/179 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            AA   K K+L  + +  N +   G   ++ +   N+ L  LNL  N+I+ +G+  +  +
Sbjct: 299 FAAGLAKNKSLRSLSLSHNELGDDGTKEIALSLASNQSLSELNLRCNSISSEGSNYISTS 358

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN 120
           L    S+  ++L    +   GA+ I   L+ N +L+ +NLT N I  QG   +  A+   
Sbjct: 359 LQINKSIVEIDLWGNNIGDYGATKIGVALSLNHSLKSINLTRNCIQ-QGIGSIASALCSA 417

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
            +K+  I++S N  G  G  E+ K++++     ++ L  ++ E +  +   ++   N S
Sbjct: 418 SSKITTIDLSANALGAIGAIEIAKIIRATTSIESMTLSSNKFESNGIQHIAQAISNNKS 476



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 63/131 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA +  K  TL  + +  N +   G  + +    +NK LR L+L+ N +   G   +  +
Sbjct: 271 LANLLAKNTTLRELILSYNALGSSGAVSFAAGLAKNKSLRSLSLSHNELGDDGTKEIALS 330

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+   SL+ LNL    + S G++ I+  L  N ++ +++L  N I   G   +  A+   
Sbjct: 331 LASNQSLSELNLRCNSISSEGSNYISTSLQINKSIVEIDLWGNNIGDYGATKIGVALSLN 390

Query: 122 TKLKQINVSEN 132
             LK IN++ N
Sbjct: 391 HSLKSINLTRN 401


>gi|307105454|gb|EFN53703.1| hypothetical protein CHLNCDRAFT_136530 [Chlorella variabilis]
          Length = 607

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 17/265 (6%)

Query: 195 HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR-SSC 253
            +  AS QS   + ++    N+    L+    +   DLS    G  G   + D L  +  
Sbjct: 144 QAGGASIQSRGLAKEAQQRLNEFMDVLRN---MATADLSAKNLGDEGFAYVVDALSFNDR 200

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
           C A +    + NG+G  GC  L + L           S   LK  +   N L +EGA ML
Sbjct: 201 CVAAD---FSKNGIGPQGCAQLCQVLT----------SNSGLKTLLLDTNTLGDEGAAML 247

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A        L  + +  N I   G  AL++  + N  L  L LN N I Y+G   L +AL
Sbjct: 248 ATALAGGSRLTSLNLSGNNIGDAGAKALAEMLKTNTTLEVLELNGNVIDYEGVGALAEAL 307

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
           ++  SL  L L D  +++ GA+ +A  L +N TL+++ +  NE+  +G   + +A+K   
Sbjct: 308 AQNTSLKTLGLSDNYIQTPGAALLAAALKENNTLQELYIKGNELGDEGIKSVCEALKQHK 367

Query: 434 KLKQINVSENQFGEEGVEEMEKLMK 458
           +LK ++   N  G+EG   + +L++
Sbjct: 368 ELKAVDFGNNSMGKEGAFALAELLR 392



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 60/379 (15%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           MLA        L  + +  N I   G  AL++  + N  L  L LN N I Y+G   L +
Sbjct: 246 MLATALAGGSRLTSLNLSGNNIGDAGAKALAEMLKTNTTLEVLELNGNVIDYEGVGALAE 305

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL++  SL  L L D  +++ GA+ +A  L +N TL+++ +  NE+  +G   + +A+K 
Sbjct: 306 ALAQNTSLKTLGLSDNYIQTPGAALLAAALKENNTLQELYIKGNELGDEGIKSVCEALKQ 365

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
             +LK ++   N  G+EG   + +L++         + D     +D   D   +    + 
Sbjct: 366 HKELKAVDFGNNSMGKEGAFALAELLR-----GCTTITDVNINMNDVGNDGAFQI---AA 417

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
           A  DN +L   D              +N   + +     +LK    L  L+LS N  GP 
Sbjct: 418 AIKDNRSLKLLDV-----------GGNNIGEDGAKALAAALKGNEELRSLELSYNPMGPE 466

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G +  AD+++        ++KL   G+G   CK+ S                        
Sbjct: 467 GAQAFADIIKY-------DMKLEVLGMGW--CKVGS------------------------ 493

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN--LRHLNLND 358
                  +G K +A +     T+ R+++  NG+ + G    S  F+E+ N  LR L L  
Sbjct: 494 ------GDGVKAVADMLMYNNTIRRLDLRGNGLGNDGAIWFSRGFKEHTNDALRELELGY 547

Query: 359 NTITYKGAIPLGQALSKLP 377
           N I  +GA  L QAL   P
Sbjct: 548 NEIKDEGACALAQALKANP 566



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 40/251 (15%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           R V  D S N  GP G   L  +L S+    L+ L L+ N LG  G  +L+ AL      
Sbjct: 200 RCVAADFSKNGIGPQGCAQLCQVLTSNS--GLKTLLLDTNTLGDEGAAMLATALAG---- 253

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
               GS L   + ++G N + + GAK LA + K   TLE +E+  N I + G+ AL++A 
Sbjct: 254 ----GSRLT-SLNLSGNN-IGDAGAKALAEMLKTNTTLEVLELNGNVIDYEGVGALAEAL 307

Query: 346 EENKNLRHLNLNDNTITYKGAI--------------------PLG--------QALSKLP 377
            +N +L+ L L+DN I   GA                      LG        +AL +  
Sbjct: 308 AQNTSLKTLGLSDNYIQTPGAALLAAALKENNTLQELYIKGNELGDEGIKSVCEALKQHK 367

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
            L  ++ G+  +   GA ++A+ L   TT+ DVN+  N++   G   +  A+K+   LK 
Sbjct: 368 ELKAVDFGNNSMGKEGAFALAELLRGCTTITDVNINMNDVGNDGAFQIAAAIKDNRSLKL 427

Query: 438 INVSENQFGEE 448
           ++V  N  GE+
Sbjct: 428 LDVGGNNIGED 438



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 122/239 (51%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L  G+RL  L+LS N  G  G + LA++L+++    LE L+LN N +   G   L++AL
Sbjct: 250 ALAGGSRLTSLNLSGNNIGDAGAKALAEMLKTNTT--LEVLELNGNVIDYEGVGALAEAL 307

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                         +LK      N ++  GA +LAA  K+  TL+ + +  N +   GI 
Sbjct: 308 ----------AQNTSLKTLGLSDNYIQTPGAALLAAALKENNTLQELYIKGNELGDEGIK 357

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           ++ +A +++K L+ ++  +N++  +GA  L + L    ++  +N+    + + GA  IA 
Sbjct: 358 SVCEALKQHKELKAVDFGNNSMGKEGAFALAELLRGCTTITDVNINMNDVGNDGAFQIAA 417

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            + DN +L+ +++  N I   G   L  A+K   +L+ + +S N  G EG +    ++K
Sbjct: 418 AIKDNRSLKLLDVGGNNIGEDGAKALAAALKGNEELRSLELSYNPMGPEGAQAFADIIK 476



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 180/454 (39%), Gaps = 62/454 (13%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           L+ +   ++    +   G   + DA   N +    + + N I  +G   L Q L+    L
Sbjct: 170 LRNMATADLSAKNLGDEGFAYVVDALSFNDRCVAADFSKNGIGPQGCAQLCQVLTSNSGL 229

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             L L    L   GA+ +A  L   + L  +NL+ N I   G   L + +K  T L+ + 
Sbjct: 230 KTLLLDTNTLGDEGAAMLATALAGGSRLTSLNLSGNNIGDAGAKALAEMLKTNTTLEVLE 289

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           ++ N    EGV  + + +        L L D+  +         + +EN++  E      
Sbjct: 290 LNGNVIDYEGVGALAEALAQNTSLKTLGLSDNYIQTPGAALLAAALKENNTLQE------ 343

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
                   +   N+  +   +S   + + H  LK       +D  +N+ G  G   LA+L
Sbjct: 344 -------LYIKGNELGDEGIKSVCEALKQHKELKA------VDFGNNSMGKEGAFALAEL 390

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           LR   C  + ++ +N N +G                                      N+
Sbjct: 391 LRG--CTTITDVNINMNDVG--------------------------------------ND 410

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA  +AA  K  ++L+ +++  N I   G  AL+ A + N+ LR L L+ N +  +GA  
Sbjct: 411 GAFQIAAAIKDNRSLKLLDVGGNNIGEDGAKALAAALKGNEELRSLELSYNPMGPEGAQA 470

Query: 369 LGQALSKLPSLAILNLGDCLLKSA-GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
               +     L +L +G C + S  G  ++A  L  N T+  ++L  N +   G +   +
Sbjct: 471 FADIIKYDMKLEVLGMGWCKVGSGDGVKAVADMLMYNNTIRRLDLRGNGLGNDGAIWFSR 530

Query: 428 AMKNKT--KLKQINVSENQFGEEGVEEMEKLMKS 459
             K  T   L+++ +  N+  +EG   + + +K+
Sbjct: 531 GFKEHTNDALRELELGYNEIKDEGACALAQALKA 564



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 7/186 (3%)

Query: 266 GLGITGCKLL-SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
           GLG  G +L  SKA+ +     ++ G        I  R  L  E  + L      L+ + 
Sbjct: 121 GLGFLGHRLFKSKAVTEAVAGVQQAGG-----ASIQSRG-LAKEAQQRLNEFMDVLRNMA 174

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
             ++    +   G   + DA   N      + + N I  +G   L Q L+    L  L L
Sbjct: 175 TADLSAKNLGDEGFAYVVDALSFNDRCVAADFSKNGIGPQGCAQLCQVLTSNSGLKTLLL 234

Query: 385 GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
               L   GA+ +A  L   + L  +NL+ N I   G   L + +K  T L+ + ++ N 
Sbjct: 235 DTNTLGDEGAAMLATALAGGSRLTSLNLSGNNIGDAGAKALAEMLKTNTTLEVLELNGNV 294

Query: 445 FGEEGV 450
              EGV
Sbjct: 295 IDYEGV 300


>gi|320168986|gb|EFW45885.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 281

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 17/241 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L+ L+   +A G +G + +AD L+ +    L  L L+ N +G  G + L++AL 
Sbjct: 39  LKENCTLLMLNFYRSAVGDVGAQAIADALKVNST--LTWLNLSENNIGDLGAQALAEALK 96

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                        AL     GRN +  +GA+ LA   K  KTL  + +  N I   G  A
Sbjct: 97  ----------VNTALTTLHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQA 146

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           ++DA + N++L  ++L  N I       L + L    +LA +NL    +  AGA +IA  
Sbjct: 147 IADALKVNQSLTEIDLQSNRIGAGAGQALAEVLKVNQALATINLNINKIGEAGAEAIADA 206

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           L  N T+  ++L  NEI+  G      A+K K     ++VS NQ  ++  + +   ++S 
Sbjct: 207 LKVNRTVTTLHLWSNEITQPGTRAFAAALKTK-----LDVSGNQIDDDTRQSIAAALQSN 261

Query: 461 G 461
           G
Sbjct: 262 G 262



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + +N I  +G  AL++A + N  L  L+L  N I  +GA  L  A
Sbjct: 63  IADALKVNSTLTWLNLSENNIGDLGAQALAEALKVNTALTTLHLGRNNIGPQGAQALADA 122

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L    +++AGA +IA  L  N +L +++L  N I    G  L + +K  
Sbjct: 123 LKLNKTLTALHLDSNRIETAGAQAIADALKVNQSLTEIDLQSNRIGAGAGQALAEVLKVN 182

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L  IN++ N+ GE G E +   +K
Sbjct: 183 QALATINLNINKIGEAGAEAIADALK 208



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 69/137 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +   ++ +  VG  A++DA + N  L  LNL++N I   GA  L +AL    +L  
Sbjct: 44  TLLMLNFYRSAVGDVGAQAIADALKVNSTLTWLNLSENNIGDLGAQALAEALKVNTALTT 103

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+LG   +   GA ++A  L  N TL  ++L  N I   G   +  A+K    L +I++ 
Sbjct: 104 LHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQAIADALKVNQSLTEIDLQ 163

Query: 131 ENQFGEEGVEEMEKLMK 147
            N+ G    + + +++K
Sbjct: 164 SNRIGAGAGQALAEVLK 180



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K    L  + + +N I   G  AL+DA + NK L  L+L+ N I   GA  +  A
Sbjct: 91  LAEALKVNTALTTLHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQAIADA 150

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL  ++L    + +    ++A+ L  N  L  +NL  N+I   G   +  A+K  
Sbjct: 151 LKVNQSLTEIDLQSNRIGAGAGQALAEVLKVNQALATINLNINKIGEAGAEAIADALKVN 210

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
             +  +++  N+  + G       +K+
Sbjct: 211 RTVTTLHLWSNEITQPGTRAFAAALKT 237



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 83/213 (38%), Gaps = 49/213 (23%)

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
           +L +LN     +   GA +IA  L  N+TL  +NL+ N I   G   L +A+K  T L  
Sbjct: 44  TLLMLNFYRSAVGDVGAQAIADALKVNSTLTWLNLSENNIGDLGAQALAEALKVNTALTT 103

Query: 127 INVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           +++  N  G +G + +   +K      AL                               
Sbjct: 104 LHLGRNNIGPQGAQALADALKLNKTLTAL------------------------------- 132

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLA 246
              H DSN    A  Q+  +             +LK    L E+DL  N  G    + LA
Sbjct: 133 ---HLDSNRIETAGAQAIAD-------------ALKVNQSLTEIDLQSNRIGAGAGQALA 176

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           ++L+ +   AL  + LN N +G  G + ++ AL
Sbjct: 177 EVLKVNQ--ALATINLNINKIGEAGAEAIADAL 207



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 54/117 (46%)

Query: 31  SDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 90
           ++  +EN  L  LN   + +   GA  +  AL    +L  LNL +  +   GA ++A+ L
Sbjct: 36  ANGLKENCTLLMLNFYRSAVGDVGAQAIADALKVNSTLTWLNLSENNIGDLGAQALAEAL 95

Query: 91  TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
             NT L  ++L  N I  QG   L  A+K    L  +++  N+    G + +   +K
Sbjct: 96  KVNTALTTLHLGRNNIGPQGAQALADALKLNKTLTALHLDSNRIETAGAQAIADALK 152


>gi|330844929|ref|XP_003294360.1| hypothetical protein DICPUDRAFT_96020 [Dictyostelium purpureum]
 gi|325075192|gb|EGC29113.1| hypothetical protein DICPUDRAFT_96020 [Dictyostelium purpureum]
          Length = 735

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 201/424 (47%), Gaps = 35/424 (8%)

Query: 36  ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
           +N  +  L L+ N I  K A  +G+ L+   ++  LNL    + + GA  I+K L  N  
Sbjct: 298 KNTTITTLELSQNGIGNKAAHCIGECLNINSTITHLNLSFNSIGNEGAEEISKALQANQK 357

Query: 96  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           L +++L+ N I ++G   L  A++N   L  IN+S+N+FG +G++    +++S G   ++
Sbjct: 358 LVNLDLSQNCIGLKGSKALGTALQNTQFLTTINLSKNRFGAKGIDF---IIESIGKNTSI 414

Query: 156 VLEDDEGECSDEEQDEESEEENDSDAEGDN--SNLSHNDSNHSHNASNQSHNNSNQSHNT 213
              D     S  + +E+S +   S  +     S+L+  D+  S ++          S   
Sbjct: 415 TSID----FSKNDLNEKSSQHLSSSIKKHPCLSSLNLCDTKLSSDSMKI------LSEGI 464

Query: 214 SNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCK 273
           S+   MS         LDLS N FG  G++ LA  L SS   ++  L L  N +G  G  
Sbjct: 465 SSSQTMSY--------LDLSRNEFGYKGLKPLASALASS--HSITYLDLTGNSIGDKGAI 514

Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           LL+ AL     +S ++ S LA        N +   GA  + +  K  ++LE +++  N  
Sbjct: 515 LLADALQQ--NNSIRDLS-LAF-------NNIGMTGAISIGSALKVNQSLEILDLSLNAE 564

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G +++++    NK ++ L++    +  +GA  LG AL    S+  L L    +   G
Sbjct: 565 IGQGFSSIAEGLCYNKKIKKLSMGTTGLGPQGAKFLGDALRYNSSITDLQLRGNEIGDEG 624

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             +I++    N ++ ++NL+ N I+ +G   L +++   + L  I ++ N    +GV+ M
Sbjct: 625 CKAISEAFKQNNSVTELNLSGNGITNEGAKALSESIFYNSSLTYIQLNHNNINPQGVQLM 684

Query: 454 EKLM 457
            + +
Sbjct: 685 RETL 688



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           S+     +  +D S N       + L+  ++   C  L  L L +  L     K+LS+ +
Sbjct: 407 SIGKNTSITSIDFSKNDLNEKSSQHLSSSIKKHPC--LSSLNLCDTKLSSDSMKILSEGI 464

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                SS +  S L L      RN    +G K LA+      ++  +++  N I   G  
Sbjct: 465 -----SSSQTMSYLDLS-----RNEFGYKGLKPLASALASSHSITYLDLTGNSIGDKGAI 514

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            L+DA ++N ++R L+L  N I   GAI +G AL    SL IL+L        G SSIA+
Sbjct: 515 LLADALQQNNSIRDLSLAFNNIGMTGAISIGSALKVNQSLEILDLSLNAEIGQGFSSIAE 574

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N  ++ +++    +  QG   L  A++  + +  + +  N+ G+EG + + +  K
Sbjct: 575 GLCYNKKIKKLSMGTTGLGPQGAKFLGDALRYNSSITDLQLRGNEIGDEGCKAISEAFK 633



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+      ++ ++++  N I   G   L+DA ++N  +R L+L  N I   GAI +G A
Sbjct: 488 LASALASSHSITYLDLTGNSIGDKGAILLADALQQNNSIRDLSLAFNNIGMTGAISIGSA 547

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL IL+L        G SSIA+ L  N  ++ +++    +  QG   L  A++  
Sbjct: 548 LKVNQSLEILDLSLNAEIGQGFSSIAEGLCYNKKIKKLSMGTTGLGPQGAKFLGDALRYN 607

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + +  + +  N+ G+EG + + +  K
Sbjct: 608 SSITDLQLRGNEIGDEGCKAISEAFK 633



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 84/384 (21%), Positives = 167/384 (43%), Gaps = 25/384 (6%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           +S +   +T NTT+  + L+ N I  +    + + +   + +  +N+S N  G EG EE+
Sbjct: 289 SSFVRLLMTKNTTITTLELSQNGIGNKAAHCIGECLNINSTITHLNLSFNSIGNEGAEEI 348

Query: 143 EKLMKSFGMAAALVLEDD----EGECSDEEQDEESE-------EENDSDAEGDNSNLSHN 191
            K +++      L L  +    +G  +     + ++        +N   A+G +  +   
Sbjct: 349 SKALQANQKLVNLDLSQNCIGLKGSKALGTALQNTQFLTTINLSKNRFGAKGIDFIIESI 408

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             N S  + + S N+ N+   +S     S+K    L  L+L D       ++ L++ + S
Sbjct: 409 GKNTSITSIDFSKNDLNEK--SSQHLSSSIKKHPCLSSLNLCDTKLSSDSMKILSEGISS 466

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           S    +  L L+ N  G  G K L+ AL           S  ++       N + ++GA 
Sbjct: 467 SQ--TMSYLDLSRNEFGYKGLKPLASAL----------ASSHSITYLDLTGNSIGDKGAI 514

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
           +LA   ++  ++  + +  N I   G  ++  A + N++L  L+L+ N    +G   + +
Sbjct: 515 LLADALQQNNSIRDLSLAFNNIGMTGAISIGSALKVNQSLEILDLSLNAEIGQGFSSIAE 574

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            L     +  L++G   L   GA  +   L  N+++ D+ L  NEI  +G   + +A K 
Sbjct: 575 GLCYNKKIKKLSMGTTGLGPQGAKFLGDALRYNSSITDLQLRGNEIGDEGCKAISEAFKQ 634

Query: 432 KTKLKQINVSENQFGEEGVEEMEK 455
              + ++N+S N    EG + + +
Sbjct: 635 NNSVTELNLSGNGITNEGAKALSE 658



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 144/365 (39%), Gaps = 67/365 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L    +  + L  + + +N     GI  + ++  +N  +  ++ + N +  K +  L  +
Sbjct: 376 LGTALQNTQFLTTINLSKNRFGAKGIDFIIESIGKNTSITSIDFSKNDLNEKSSQHLSSS 435

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + K P L+ LNL D  L S     +++ ++ + T+  ++L+ NE   +G   L  A+ + 
Sbjct: 436 IKKHPCLSSLNLCDTKLSSDSMKILSEGISSSQTMSYLDLSRNEFGYKGLKPLASALASS 495

Query: 122 TKLKQINVSENQFGEEG-------------VEEMEKLMKSFGMAAALVL-----EDDEGE 163
             +  ++++ N  G++G             + ++     + GM  A+ +      +   E
Sbjct: 496 HSITYLDLTGNSIGDKGAILLADALQQNNSIRDLSLAFNNIGMTGAISIGSALKVNQSLE 555

Query: 164 CSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKT 223
             D   + E  +   S AEG    L +N                                
Sbjct: 556 ILDLSLNAEIGQGFSSIAEG----LCYN-------------------------------- 579

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
             ++ +L +     GP G + L D LR +   ++ +L+L  N +G  GCK +S+A     
Sbjct: 580 -KKIKKLSMGTTGLGPQGAKFLGDALRYNS--SITDLQLRGNEIGDEGCKAISEAF---- 632

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
              K+  S   L +     N + NEGAK L+       +L  +++  N I   G+  + +
Sbjct: 633 ---KQNNSVTELNL---SGNGITNEGAKALSESIFYNSSLTYIQLNHNNINPQGVQLMRE 686

Query: 344 AFEEN 348
               N
Sbjct: 687 TLAIN 691



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 75/161 (46%)

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           +  +  +  K  T+  +E+ QNGI +     + +    N  + HLNL+ N+I  +GA  +
Sbjct: 289 SSFVRLLMTKNTTITTLELSQNGIGNKAAHCIGECLNINSTITHLNLSFNSIGNEGAEEI 348

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            +AL     L  L+L    +   G+ ++   L +   L  +NL+ N    +G   +++++
Sbjct: 349 SKALQANQKLVNLDLSQNCIGLKGSKALGTALQNTQFLTTINLSKNRFGAKGIDFIIESI 408

Query: 430 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
              T +  I+ S+N   E+  + +   +K     ++L L D
Sbjct: 409 GKNTSITSIDFSKNDLNEKSSQHLSSSIKKHPCLSSLNLCD 449



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 79/171 (46%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N + N+ A  +        T+  + +  N I + G   +S A + N+ L +L+L+ N I
Sbjct: 309 QNGIGNKAAHCIGECLNINSTITHLNLSFNSIGNEGAEEISKALQANQKLVNLDLSQNCI 368

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             KG+  LG AL     L  +NL      + G   I + +  NT++  ++ + N+++ + 
Sbjct: 369 GLKGSKALGTALQNTQFLTTINLSKNRFGAKGIDFIIESIGKNTSITSIDFSKNDLNEKS 428

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
              L  ++K    L  +N+ + +   + ++ + + + S    + L L  +E
Sbjct: 429 SQHLSSSIKKHPCLSSLNLCDTKLSSDSMKILSEGISSSQTMSYLDLSRNE 479


>gi|156841798|ref|XP_001644270.1| hypothetical protein Kpol_1030p22 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114909|gb|EDO16412.1| hypothetical protein Kpol_1030p22 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 405

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 123/240 (51%), Gaps = 14/240 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L+LSDNAFG   ++ L   + ++    L+ L L+NNG+G    + + KAL    ++ K E
Sbjct: 113 LNLSDNAFGLRTIDQLEHYIANAV--HLKHLILSNNGMGPFAGERIGKALFKLSQN-KIE 169

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGI-TALSDAFEE 347
                L+ FI GRNRLEN  +  LA   K     L+ V++ QNGI   G+ T +    + 
Sbjct: 170 NKESMLETFICGRNRLENGSSLYLALGLKSHGDGLKVVKLYQNGIRPKGVATLIHYGLQH 229

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNT- 405
           NK L  ++L DNT T   ++    AL     SL  LNL DCLLK  G+ ++ K L +   
Sbjct: 230 NKKLEIIDLQDNTFTKHASLIFASALPIWSESLKELNLNDCLLKGVGSDAVFKVLKEKKF 289

Query: 406 -TLEDVNLTCNEISVQGGLD--LVKAMK--NKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
             L  +    NE+ VQ  L+   + A++  N   LK + ++ N+  EE  E ++ L + F
Sbjct: 290 GKLATLRFEYNEM-VQETLESSFLPALEKGNLPNLKTLELNGNRL-EEDSEALDSLQEFF 347



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 10/146 (6%)

Query: 12  LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
           L+ V++ QNGI   G+ T +    + NKKL  ++L DNT T   ++    AL     SL 
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQHNKKLEIIDLQDNTFTKHASLIFASALPIWSESLK 263

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLD--LVKAMK--NKTK 123
            LNL DCLLK  G+ ++ K L +     L  +    NE+ VQ  L+   + A++  N   
Sbjct: 264 ELNLNDCLLKGVGSDAVFKVLKEKKFGKLATLRFEYNEM-VQETLESSFLPALEKGNLPN 322

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSF 149
           LK + ++ N+  EE  E ++ L + F
Sbjct: 323 LKTLELNGNRL-EEDSEALDSLQEFF 347


>gi|320165044|gb|EFW41943.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 214

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 92/170 (54%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++  +GA+ +A   K   TL ++++ +N I   G  ALS A + NK L  ++LN N I 
Sbjct: 7   NQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIG 66

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + + L    +LA L L +  L  AGA++IA+ L  N  L  ++L  N+I   G 
Sbjct: 67  DAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGA 126

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           L + +A+K    L  +N+SENQ G+ G + + + +K       LVL ++E
Sbjct: 127 LAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENE 176



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 84/160 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  +++ +N I   G  ALS A + NK L  ++LN N I   GA  + + 
Sbjct: 17  IAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAET 76

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +LA L L +  L  AGA++IA+ L  N  L  ++L  N+I   G L + +A+K  
Sbjct: 77  LKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVN 136

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             L  +N+SENQ G+ G + + + +K       LVL ++E
Sbjct: 137 KTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENE 176



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 12/204 (5%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
           L DN  G  G   +A+ L+ +    L ++KL  N +G  G   LS AL        K   
Sbjct: 4   LHDNQIGEDGARAIAETLKVNTT--LTKIKLWKNQIGDAGAHALSAAL--------KVNK 53

Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
            L +K+ + G N++ + GA+ +A   K   TL  + +  N +   G TA+++  + NK L
Sbjct: 54  TL-IKIDLNG-NQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKML 111

Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
             L+L++N I   GA+ + +AL    +L  LNL +  +  AGA +IA+ L  NTTL  + 
Sbjct: 112 TSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLV 171

Query: 412 LTCNEISVQGGLDLVKAMKNKTKL 435
           L  NEI   G   + +A+K  T L
Sbjct: 172 LNENEIGNAGAQAIAEALKVNTTL 195



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 86/157 (54%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ + GA  L+A  K  KTL ++++  N I   G  A+++  + N  L +L L++N +
Sbjct: 34  KNQIGDAGAHALSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKL 93

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + + L     L  L+L +  + +AGA +IA+ L  N TL  +NL+ N+I   G
Sbjct: 94  GDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAG 153

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              + +A+K  T L  + ++EN+ G  G + + + +K
Sbjct: 154 AQAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALK 190



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 78/146 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+A  K  KTL  +++  N I   G  A+++  + N  L +L L++N +   GA  + + 
Sbjct: 45  LSAALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEM 104

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L +  + +AGA +IA+ L  N TL  +NL+ N+I   G   + +A+K  
Sbjct: 105 LKVNKMLTSLSLDNNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQAIAEALKVN 164

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  + ++EN+ G  G + + + +K
Sbjct: 165 TTLPCLVLNENEIGNAGAQAIAEALK 190



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L+++DL+ N  G  G + +A+ L+ +   A   L L+NN LG  G   +++ L
Sbjct: 48  ALKVNKTLIKIDLNGNQIGDAGAQAIAETLKVNTTLA--NLGLHNNKLGDAGATAIAEML 105

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L+L       N++ N GA  +A   K  KTL  + + +N I   G  
Sbjct: 106 -----KVNKMLTSLSLD-----NNQIGNAGALAIAEALKVNKTLTWLNLSENQIGDAGAQ 155

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           A+++A + N  L  L LN+N I   GA  + +AL    +L +L  G
Sbjct: 156 AIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALKVNTTLIVLLYG 201



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 66/123 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL ++ +  N +   G TA+++  + NK L  L+L++N I   GA+ + +A
Sbjct: 73  IAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQIGNAGALAIAEA 132

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL +  +  AGA +IA+ L  NTTL  + L  NEI   G   + +A+K  
Sbjct: 133 LKVNKTLTWLNLSENQIGDAGAQAIAEALKVNTTLPCLVLNENEIGNAGAQAIAEALKVN 192

Query: 122 TKL 124
           T L
Sbjct: 193 TTL 195



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 58/117 (49%)

Query: 45  LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 104
           L+DN I   GA  + + L    +L  + L    +  AGA +++  L  N TL  ++L  N
Sbjct: 4   LHDNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGN 63

Query: 105 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           +I   G   + + +K  T L  + +  N+ G+ G   + +++K   M  +L L++++
Sbjct: 64  QIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQ 120



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 58/117 (49%)

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L+DN I   GA  + + L    +L  + L    +  AGA +++  L  N TL  ++L  N
Sbjct: 4   LHDNQIGEDGARAIAETLKVNTTLTKIKLWKNQIGDAGAHALSAALKVNKTLIKIDLNGN 63

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           +I   G   + + +K  T L  + +  N+ G+ G   + +++K   M  +L L++++
Sbjct: 64  QIGDAGAQAIAETLKVNTTLANLGLHNNKLGDAGATAIAEMLKVNKMLTSLSLDNNQ 120


>gi|440800728|gb|ELR21763.1| Ubiquitinconjugating enzyme subfamily protein [Acanthamoeba
            castellanii str. Neff]
          Length = 1504

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 198/481 (41%), Gaps = 80/481 (16%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG--- 82
            G   L+D    NK+L  L+L+ N + Y G   +   L+  PS+  LNL       +    
Sbjct: 787  GAKELADGLLANKRLVKLDLSRNGLGYSGLRAVLYNLAFSPSIKELNLSRVSGSGSSSDL 846

Query: 83   ---ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE------NQ 133
                 +++K    N TL  +N     I+      + ++++    L+ +++S+      +Q
Sbjct: 847  NELGEALSKLFRINVTLNRLNFWETSIAPAFTASVFESLRGNRALRHLDISQIGTINSDQ 906

Query: 134  FGEEGVEEMEKLMKSFGMAA------------------ALVLEDDEGECSDEEQDEESEE 175
             G  G      L K+  +A+                  AL++E +E +      DE + +
Sbjct: 907  LGHLGA----ALTKNRTLASLLLENNNISGHGLETLYKALLVEKEEEKGKAVNDDERTRK 962

Query: 176  ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
            E   D   D                        +      + H++      LVE +L +N
Sbjct: 963  EKRRDEMLD------------------------KVKEVEKEFHLN------LVEFNLKNN 992

Query: 236  AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
              G    + L  L+  +   +LE L L++  L     + L  AL    E++ +      L
Sbjct: 993  GLGSAAGKILGKLV--TVASSLEVLTLDHCSLDAKAGETLGLAL----ETNTR------L 1040

Query: 296  KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
            +      N L  EGAK LAA  +  KTL+ +++  NGI   G  A++    +N +L  LN
Sbjct: 1041 RTLKLRHNTLGKEGAKALAAGLRHNKTLQVLDLSGNGIGVSGARAIAGTLADNASLTELN 1100

Query: 356  LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
            L  N +   GA  L +AL+   +L  L+LG   ++  GA +IA+ +     L ++ L  N
Sbjct: 1101 LFGNLVDVDGARDLAKALATNKTLVKLDLGLNRIRDKGAQAIAQAMASAEQLTEIGLKLN 1160

Query: 416  EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK----SFGMAAALVLEDD 471
             I   G L + KA+     ++   ++ NQ  +E +  +  L+K    SF +A  + L D 
Sbjct: 1161 FIKDHGALAVAKAVSVSPAIRSFKLAGNQLEDETLLAINDLIKSPHISFDLAPRVALLDP 1220

Query: 472  E 472
            E
Sbjct: 1221 E 1221



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 4/164 (2%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LAA  +  KTL+ +++  NGI   G  A++    +N  L  LNL  N +   GA  L +A
Sbjct: 1058 LAAGLRHNKTLQVLDLSGNGIGVSGARAIAGTLADNASLTELNLFGNLVDVDGARDLAKA 1117

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L+   +L  L+LG   ++  GA +IA+ +     L ++ L  N I   G L + KA+   
Sbjct: 1118 LATNKTLVKLDLGLNRIRDKGAQAIAQAMASAEQLTEIGLKLNFIKDHGALAVAKAVSVS 1177

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMK----SFGMAAALVLEDDE 161
              ++   ++ NQ  +E +  +  L+K    SF +A  + L D E
Sbjct: 1178 PAIRSFKLAGNQLEDETLLAINDLIKSPHISFDLAPRVALLDPE 1221



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)

Query: 8    KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
            +L+TL+   +  N +   G  AL+     NK L+ L+L+ N I   GA  +   L+   S
Sbjct: 1039 RLRTLK---LRHNTLGKEGAKALAAGLRHNKTLQVLDLSGNGIGVSGARAIAGTLADNAS 1095

Query: 68   LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
            L  LNL   L+   GA  +AK L  N TL  ++L  N I  +G   + +AM +  +L +I
Sbjct: 1096 LTELNLFGNLVDVDGARDLAKALATNKTLVKLDLGLNRIRDKGAQAIAQAMASAEQLTEI 1155

Query: 128  NVSENQFGEEGVEEMEK------LMKSFGMA 152
             +  N   + G   + K       ++SF +A
Sbjct: 1156 GLKLNFIKDHGALAVAKAVSVSPAIRSFKLA 1186


>gi|345309115|ref|XP_003428791.1| PREDICTED: protein NLRC3 [Ornithorhynchus anatinus]
          Length = 992

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 12/224 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L NN +   G K L+  L
Sbjct: 758 SLMVNRSLTTLDLRGNSIGPQGAKALADALKIN--RVLMSLNLQNNKIKDDGAKALAHVL 815

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                S+    S L L+     +N +   GAK LA+  K+ +TL+++    NG  + G  
Sbjct: 816 -----STNNTLSVLHLQ-----KNSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSE 865

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL++A + N+ L  L+L  N+I+  G + L QAL    +L  LNL +  + S GA  IA 
Sbjct: 866 ALAEALKLNQGLITLDLQSNSISNAGILALTQALCSNKTLINLNLRENSIGSEGAREIAS 925

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
            L  N TL+D++L  N +  +G   L  A+K    L  +++  N
Sbjct: 926 ALRANRTLKDLDLAANLLREEGAQALAVAVKENQTLTSLHLQWN 969



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 69/136 (50%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +E + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL     L  L
Sbjct: 737 IEKLSLAENEISNKGAKALARSLMVNRSLTTLDLRGNSIGPQGAKALADALKINRVLMSL 796

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL +  +K  GA ++A  L+ N TL  ++L  N I   G   L  A+K    LK++  S 
Sbjct: 797 NLQNNKIKDDGAKALAHVLSTNNTLSVLHLQKNSIGPIGAKTLASALKQNRTLKKLMFSG 856

Query: 132 NQFGEEGVEEMEKLMK 147
           N  G EG E + + +K
Sbjct: 857 NGCGNEGSEALAEALK 872



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+  K+ +TL+ +    NG  + G  AL++A + N+ L  L+L  N+I+  G + L QA
Sbjct: 839 LASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDLQSNSISNAGILALTQA 898

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL +  + S GA  IA  L  N TL+D++L  N +  +G   L  A+K  
Sbjct: 899 LCSNKTLINLNLRENSIGSEGAREIASALRANRTLKDLDLAANLLREEGAQALAVAVKEN 958

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 959 QTLTSLHLQWN 969



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 73/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V     TL  + + +N I  +G   L+ A ++N+ L+ L  + N    +G+  L +A
Sbjct: 811 LAHVLSTNNTLSVLHLQKNSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEA 870

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L    + +AG  ++ + L  N TL ++NL  N I  +G  ++  A++  
Sbjct: 871 LKLNQGLITLDLQSNSISNAGILALTQALCSNKTLINLNLRENSIGSEGAREIASALRAN 930

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK ++++ N   EEG + +   +K
Sbjct: 931 RTLKDLDLAANLLREEGAQALAVAVK 956



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 34/184 (18%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++L  +++  N I   G  AL+DA + N+ L  LNL +N I   GA  L   LS   +L+
Sbjct: 763 RSLTTLDLRGNSIGPQGAKALADALKINRVLMSLNLQNNKIKDDGAKALAHVLSTNNTLS 822

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDV----------------------------NL 101
           +L+L    +   GA ++A  L  N TL+ +                            +L
Sbjct: 823 VLHLQKNSIGPIGAKTLASALKQNRTLKKLMFSGNGCGNEGSEALAEALKLNQGLITLDL 882

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME------KLMKSFGMAAAL 155
             N IS  G L L +A+ +   L  +N+ EN  G EG  E+       + +K   +AA L
Sbjct: 883 QSNSISNAGILALTQALCSNKTLINLNLRENSIGSEGAREIASALRANRTLKDLDLAANL 942

Query: 156 VLED 159
           + E+
Sbjct: 943 LREE 946



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + L  +++  N I + GI AL+ A   NK L +LNL +N+I  +GA  +  A
Sbjct: 867 LAEALKLNQGLITLDLQSNSISNAGILALTQALCSNKTLINLNLRENSIGSEGAREIASA 926

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L    +L  L+L   LL+  GA ++A  + +N TL  ++L  N I       L +A++
Sbjct: 927 LRANRTLKDLDLAANLLREEGAQALAVAVKENQTLTSLHLQWNFIQSSATKALAQALQ 984


>gi|320166643|gb|EFW43542.1| hypothetical protein CAOG_01586 [Capsaspora owczarzaki ATCC 30864]
          Length = 1804

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/171 (33%), Positives = 86/171 (50%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ ++GA  LA   K   TL  + +  N I   G+ AL+D    N  L+ L L+ N I
Sbjct: 61  KNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTTGLMALADCLSVNSQLKELFLDWNHI 120

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L +AL+   SL  L+L   L++  G  +IAK L  N+ LE +NL  N +   G
Sbjct: 121 DCQGARALAKALATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRVGSTG 180

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
                 A+K   KL ++N+S N  G  G + +   +KS      L L D+E
Sbjct: 181 TSAFATALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNE 231



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 54/160 (33%), Positives = 79/160 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K   TL  + +  N I   G+ AL+D    N +L+ L L+ N I  +GA  L +A
Sbjct: 72  LAEALKHGSTLTSLNLNSNMITTTGLMALADCLSVNSQLKELFLDWNHIDCQGARALAKA 131

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+   SL  L+L   L++  G  +IAK L  N+ LE +NL  N +   G      A+K  
Sbjct: 132 LATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRVGSTGTSAFATALKVN 191

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
            KL ++N+S N  G  G + +   +KS      L L D+E
Sbjct: 192 RKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNE 231



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 40/236 (16%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           + L     L++LDL  N  G  G   LA+ L+      L  L LN+N +  TG      A
Sbjct: 46  LGLMANTNLLQLDLKKNQIGDKGAIALAEALKHGS--TLTSLNLNSNMITTTGLM----A 99

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L DC   + +      LK      N ++ +GA+                           
Sbjct: 100 LADCLSVNSQ------LKELFLDWNHIDCQGAR--------------------------- 126

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            AL+ A   N +LR L+L  N I   G I + ++L    +L +LNL    + S G S+ A
Sbjct: 127 -ALAKALATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRVGSTGTSAFA 185

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
             L  N  L  +NL+ N++  +G   L  ++K+   L ++++S+N+  +E V+ ++
Sbjct: 186 TALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDEVVKVLK 241



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 77/154 (50%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L +E A+ +A        L ++++ +N I   G  AL++A +    L  LNLN N IT  
Sbjct: 36  LCDEEAEAIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTT 95

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G + L   LS    L  L L    +   GA ++AK L  NT+L  ++L  N I + GG+ 
Sbjct: 96  GLMALADCLSVNSQLKELFLDWNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGIA 155

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + K++++ + L+ +N+  N+ G  G       +K
Sbjct: 156 IAKSLESNSALEVLNLKGNRVGSTGTSAFATALK 189



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 69/136 (50%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++ +N I   G  AL++A +    L  LNLN N IT  G + L   LS    L  L
Sbjct: 54  LLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTTGLMALADCLSVNSQLKEL 113

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            L    +   GA ++AK L  NT+L  ++L  N I + GG+ + K++++ + L+ +N+  
Sbjct: 114 FLDWNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKG 173

Query: 132 NQFGEEGVEEMEKLMK 147
           N+ G  G       +K
Sbjct: 174 NRVGSTGTSAFATALK 189



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 63/120 (52%)

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++     N NL  L+L  N I  KGAI L +AL    +L  LNL   ++ + G  ++A 
Sbjct: 43  AIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTTGLMALAD 102

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L+ N+ L+++ L  N I  QG   L KA+   T L+++++  N    +G   + K ++S
Sbjct: 103 CLSVNSQLKELFLDWNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGIAIAKSLES 162



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 69/132 (52%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N I   G  AL+ A   N  LR L+L  N I   G I + ++L    +L +L
Sbjct: 110 LKELFLDWNHIDCQGARALAKALATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVL 169

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL    + S G S+ A  L  N  L  +NL+ N++  +G   L  ++K+   L ++++S+
Sbjct: 170 NLKGNRVGSTGTSAFATALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSD 229

Query: 132 NQFGEEGVEEME 143
           N+  +E V+ ++
Sbjct: 230 NEIDDEVVKVLK 241



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 103/251 (41%), Gaps = 49/251 (19%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A++     N  L  L+L  N I  KGAI L +AL    +L  LNL   ++ + G  ++A 
Sbjct: 43  AIALGLMANTNLLQLDLKKNQIGDKGAIALAEALKHGSTLTSLNLNSNMITTTGLMALAD 102

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L+ N+ L+++ L  N I  QG   L KA+   T L+++++  N    +G          
Sbjct: 103 CLSVNSQLKELFLDWNHIDCQGARALAKALATNTSLRRLDLEANLIRLDG---------- 152

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
            G+A A  LE                                  SN +    N   N   
Sbjct: 153 -GIAIAKSLE----------------------------------SNSALEVLNLKGNRVG 177

Query: 209 QSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
            +  ++  +  +LK   +L +L+LS N  G  G + L   L+S+    L EL L++N + 
Sbjct: 178 STGTSAFAT--ALKVNRKLCKLNLSSNDVGSRGAKALGLSLKSN--IGLTELSLSDNEID 233

Query: 269 ITGCKLLSKAL 279
               K+L   L
Sbjct: 234 DEVVKVLKTNL 244



 Score = 47.4 bits (111), Expect = 0.018,   Method: Composition-based stats.
 Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 20/183 (10%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK G+ L  L+L+ N     G+  LAD L  S    L+EL L+ N +   G + L+KAL
Sbjct: 75  ALKHGSTLTSLNLNSNMITTTGLMALADCL--SVNSQLKELFLDWNHIDCQGARALAKAL 132

Query: 280 HDCYE------------------SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                                   +K   S  AL+V     NR+ + G    A   K  +
Sbjct: 133 ATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRVGSTGTSAFATALKVNR 192

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            L ++ +  N +   G  AL  + + N  L  L+L+DN I  +    L   L   P+L  
Sbjct: 193 KLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDEVVKVLKTNLMLYPTLKT 252

Query: 382 LNL 384
           L+L
Sbjct: 253 LDL 255



 Score = 40.4 bits (93), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 4/123 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA       +L  +++  N I   G  A++ + E N  L  LNL  N +   G      A
Sbjct: 128 LAKALATNTSLRRLDLEANLIRLDGGIAIAKSLESNSALEVLNLKGNRVGSTGTSAFATA 187

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  LNL    + S GA ++   L  N  L +++L+ NEI  +    +VK +K  
Sbjct: 188 LKVNRKLCKLNLSSNDVGSRGAKALGLSLKSNIGLTELSLSDNEIDDE----VVKVLKTN 243

Query: 122 TKL 124
             L
Sbjct: 244 LML 246


>gi|428177637|gb|EKX46516.1| hypothetical protein GUITHDRAFT_107721 [Guillardia theta CCMP2712]
          Length = 604

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 181/470 (38%), Gaps = 76/470 (16%)

Query: 12  LEHVEMPQNGIYHVGITALSDAF---EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           L H+++  N I   G+  L D+F      K+L++L+L+ N I+ +GA+ LG  L   P  
Sbjct: 70  LVHMDLRSNNIGAQGMKLLLDSFCKTPRAKELKYLSLDHNNISDEGALLLGDLLRTCP-- 127

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
                                      +E +N+  N I   G   L +++ +   L   +
Sbjct: 128 --------------------------LIETLNVANNGIGYHGAAGLAQSLPHCKYLSGFD 161

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           +  N FG+EG+ EM   +        L L  +E      E   E     DS         
Sbjct: 162 IGGNGFGDEGIREMSTFLGQCKRLKQLSLRFNEIHVDGAENLAEHLPRCDSLTHLQICRN 221

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHM---------SLKTGARLVELDLSDNAFGP 239
               S   H +S     N     + S               +    +L  LDL DN    
Sbjct: 222 KLECSGIRHISSCLPRCNQLSFLDLSGTCICNEGAAILAECIVLCKKLQHLDLRDN---K 278

Query: 240 IGVEGLADLLRSSC--CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
           IGVEG A  L SS   C  LE L L+ NGLG  G + LS  L  C            L  
Sbjct: 279 IGVEG-ASRLSSSFKHCNLLEFLDLSKNGLGDQGVEGLSSGLTWCER----------LVH 327

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
              G N   + GA  L    +   +L+ + +  N I   G  ALS +      L  ++L 
Sbjct: 328 LALGMNGFGDRGATSLGRQVR--SSLQHLFLANNKISDRGAEALSSSLCGCPELAIVDLR 385

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI------------------AK 399
            N I   G   LG+ LS++     +NL   L +++ +SS+                  + 
Sbjct: 386 WNKIGASGGALLGERLSRVKLALAVNLVAGLARTSSSSSVRHLGLRHNLVEDAGLIGFSP 445

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            L+   +L  ++L+CN I  QG L L + +    ++ ++++ EN  G+ G
Sbjct: 446 MLSSLRSLAIIDLSCNRIGNQGALALAEVLPKLRQIVRVDLRENGIGDFG 495



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 182/459 (39%), Gaps = 39/459 (8%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           + K L+++ +  N I   G   L D       +  LN+ +N I Y GA  L Q+L     
Sbjct: 97  RAKELKYLSLDHNNISDEGALLLGDLLRTCPLIETLNVANNGIGYHGAAGLAQSLPHCKY 156

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L+  ++G       G   ++ +L     L+ ++L  NEI V G  +L + +     L  +
Sbjct: 157 LSGFDIGGNGFGDEGIREMSTFLGQCKRLKQLSLRFNEIHVDGAENLAEHLPRCDSLTHL 216

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
            +  N+    G+  +   +      + L   D  G C   E      E      +  + +
Sbjct: 217 QICRNKLECSGIRHISSCLPRCNQLSFL---DLSGTCICNEGAAILAECIVLCKKLQHLD 273

Query: 188 LSHND---SNHSHNASNQSHNNSNQSHNTS-----NQSHMSLKTGA----RLVELDLSDN 235
           L  N       S  +S+  H N  +  + S     +Q    L +G     RLV L L  N
Sbjct: 274 LRDNKIGVEGASRLSSSFKHCNLLEFLDLSKNGLGDQGVEGLSSGLTWCERLVHLALGMN 333

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
            FG  G   L   +RSS    L+ L L NN +   G + LS +L  C E          L
Sbjct: 334 GFGDRGATSLGRQVRSS----LQHLFLANNKISDRGAEALSSSLCGCPE----------L 379

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
            +     N++   G  +L       + L RV++       V + A       + ++RHL 
Sbjct: 380 AIVDLRWNKIGASGGALLG------ERLSRVKLA----LAVNLVAGLARTSSSSSVRHLG 429

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L  N +   G I     LS L SLAI++L    + + GA ++A+ L     +  V+L  N
Sbjct: 430 LRHNLVEDAGLIGFSPMLSSLRSLAIIDLSCNRIGNQGALALAEVLPKLRQIVRVDLREN 489

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            I   G + L +++     L  +++  N FG  G   + 
Sbjct: 490 GIGDFGAMALAESLPCCPALSSLDIRINCFGAAGARSLR 528



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 160/417 (38%), Gaps = 61/417 (14%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA      K L   ++  NG    GI  +S    + K+L+ L+L  N I   GA  L + 
Sbjct: 147 LAQSLPHCKYLSGFDIGGNGFGDEGIREMSTFLGQCKRLKQLSLRFNEIHVDGAENLAEH 206

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L +    L+ +G   I+  L     L  ++L+   I  +G   L + +   
Sbjct: 207 LPRCDSLTHLQICRNKLECSGIRHISSCLPRCNQLSFLDLSGTCICNEGAAILAECIVLC 266

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
            KL+ +++ +N+ G EG   +    K   +               E  D       D   
Sbjct: 267 KKLQHLDLRDNKIGVEGASRLSSSFKHCNLL--------------EFLDLSKNGLGDQGV 312

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
           EG +S L+  +    H A   +      + +   Q   SL+       L L++N     G
Sbjct: 313 EGLSSGLTWCE-RLVHLALGMNGFGDRGATSLGRQVRSSLQ------HLFLANNKISDRG 365

Query: 242 VEGLADLLRSSC-CFALEELKLNNNGLGITGCKLLSKAL--------------------- 279
            E L+    S C C  L  + L  N +G +G  LL + L                     
Sbjct: 366 AEALSS---SLCGCPELAIVDLRWNKIGASGGALLGERLSRVKLALAVNLVAGLARTSSS 422

Query: 280 ---------HDCYESSKKEG-SPL-----ALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
                    H+  E +   G SP+     +L +     NR+ N+GA  LA V  KL+ + 
Sbjct: 423 SSVRHLGLRHNLVEDAGLIGFSPMLSSLRSLAIIDLSCNRIGNQGALALAEVLPKLRQIV 482

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           RV++ +NGI   G  AL+++      L  L++  N     GA  L  A  +  S+ I
Sbjct: 483 RVDLRENGIGDFGAMALAESLPCCPALSSLDIRINCFGAAGARSLRMAEERKKSVTI 539



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS---LAILNLGDCLLKSAGA 394
           + AL +A E   +L H++L  N I  +G   L  +  K P    L  L+L    +   GA
Sbjct: 57  LPALVNALEGGLHLVHMDLRSNNIGAQGMKLLLDSFCKTPRAKELKYLSLDHNNISDEGA 116

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
             +   L     +E +N+  N I   G   L +++ +   L   ++  N FG+EG+ EM 
Sbjct: 117 LLLGDLLRTCPLIETLNVANNGIGYHGAAGLAQSLPHCKYLSGFDIGGNGFGDEGIREMS 176

Query: 455 KLM 457
             +
Sbjct: 177 TFL 179


>gi|449475581|ref|XP_002192566.2| PREDICTED: protein NLRC3 [Taeniopygia guttata]
          Length = 1007

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 192/425 (45%), Gaps = 38/425 (8%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
           +++ L+L +N I+ KGA  L ++L    SL +L+L    +   GA ++A  L  N  L  
Sbjct: 608 QIQRLSLAENQISNKGAKALARSLLVNRSLMVLDLRSNSIGPTGAKALADALKKNQILLS 667

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           +NL  N I   G   L +A+    +L  +++ +N  G +G  +M + +K       L+L 
Sbjct: 668 LNLQHNSIKEDGATFLAEALLTNHRLVTLHLQKNGIGAQGTRKMAEALKQNCSLRELIL- 726

Query: 159 DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDS---NHSHNASNQSHNNSNQSHNTSN 215
                               S++ GDN +++  ++   NHS  + +   N+ + +  T+ 
Sbjct: 727 -------------------SSNSVGDNGSIALAEALRVNHSLQSLDLQSNSISSAGVTAL 767

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
            + +    G  L+ L+L +N+    G   +A  LRS+    L +L L  N L   G K +
Sbjct: 768 TAALCSNKG--LLSLNLRENSISKEGGPAIARALRSNS--TLRKLDLAANLLHDDGGKAI 823

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           + A+          G   AL       N ++ + A  LA   +   +L  +++ +N I  
Sbjct: 824 ASAI----------GENRALTSLHLQWNFIQAKAATALAQALQSNSSLASLDLQENAIGD 873

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
            G+ ALS A + N  L  L+L   ++   GA  L +AL    SL IL+L    L  AGA 
Sbjct: 874 EGVAALSAALKVNTTLADLHLQVASVGVAGAQALAEALMVNKSLQILDLRGNSLGPAGAK 933

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL-KQINVSENQFGEEGVEEME 454
           ++A  L  N +L  + L  N + + G + +  A+K    L    N+  N+ G+ G + + 
Sbjct: 934 AVANALKVNRSLRWLKLQENSLGMDGAICIATALKGNHGLTTSSNLQGNRIGQSGAKMIS 993

Query: 455 KLMKS 459
             ++S
Sbjct: 994 DTIRS 998



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 153/363 (42%), Gaps = 89/363 (24%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + + +NGI   G   +++A ++N  LR L L+ N++   G+I L +AL    SL  L
Sbjct: 693 LVTLHLQKNGIGAQGTRKMAEALKQNCSLRELILSSNSVGDNGSIALAEALRVNHSLQSL 752

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    + SAG +++   L  N  L  +NL  N IS +GG  + +A+++ + L++++++ 
Sbjct: 753 DLQSNSISSAGVTALTAALCSNKGLLSLNLRENSISKEGGPAIARALRSNSTLRKLDLAA 812

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           N                       +L DD G+               + A G+N  L+  
Sbjct: 813 N-----------------------LLHDDGGKAI-------------ASAIGENRALT-- 834

Query: 192 DSNH-SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
            S H   N        +      SN S         L  LDL +NA G  GV  L+  L+
Sbjct: 835 -SLHLQWNFIQAKAATALAQALQSNSS---------LASLDLQENAIGDEGVAALSAALK 884

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +   A  +L L    +G+ G + L++AL                         + N   
Sbjct: 885 VNTTLA--DLHLQVASVGVAGAQALAEAL-------------------------MVN--- 914

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
                     K+L+ +++  N +   G  A+++A + N++LR L L +N++   GAI + 
Sbjct: 915 ----------KSLQILDLRGNSLGPAGAKAVANALKVNRSLRWLKLQENSLGMDGAICIA 964

Query: 371 QAL 373
            AL
Sbjct: 965 TAL 967



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   +   +L+ +++  N I   G+TAL+ A   NK L  LNL +N+I+ +G   + +A
Sbjct: 739 LAEALRVNHSLQSLDLQSNSISSAGVTALTAALCSNKGLLSLNLRENSISKEGGPAIARA 798

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   G  +IA  + +N  L  ++L  N I  +    L +A+++ 
Sbjct: 799 LRSNSTLRKLDLAANLLHDDGGKAIASAIGENRALTSLHLQWNFIQAKAATALAQALQSN 858

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + L  +++ EN  G+EGV  +   +K
Sbjct: 859 SSLASLDLQENAIGDEGVAALSAALK 884



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 61/131 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+  +L  + +  N +   G  AL++A   N  L+ L+L  N+I+  G   L  A
Sbjct: 711 MAEALKQNCSLRELILSSNSVGDNGSIALAEALRVNHSLQSLDLQSNSISSAGVTALTAA 770

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  LNL +  +   G  +IA+ L  N+TL  ++L  N +   GG  +  A+   
Sbjct: 771 LCSNKGLLSLNLRENSISKEGGPAIARALRSNSTLRKLDLAANLLHDDGGKAIASAIGEN 830

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 831 RALTSLHLQWN 841



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   +   TL  +++  N ++  G  A++ A  EN+ L  L+L  N I  K A  L QA
Sbjct: 795 IARALRSNSTLRKLDLAANLLHDDGGKAIASAIGENRALTSLHLQWNFIQAKAATALAQA 854

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SLA L+L +  +   G ++++  L  NTTL D++L    + V G   L +A+   
Sbjct: 855 LQSNSSLASLDLQENAIGDEGVAALSAALKVNTTLADLHLQVASVGVAGAQALAEALMVN 914

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L+ +++  N  G  G + +   +K
Sbjct: 915 KSLQILDLRGNSLGPAGAKAVANALK 940


>gi|255084115|ref|XP_002508632.1| flagellar autotomy protein [Micromonas sp. RCC299]
 gi|226523909|gb|ACO69890.1| flagellar autotomy protein [Micromonas sp. RCC299]
          Length = 1414

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 47/276 (17%)

Query: 230  LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES---- 285
            L L + A GP G   LA++LR   C  LE L L   GLG  G + +  AL    ++    
Sbjct: 1073 LALGETALGPKGGIALAEILRDGSCAGLERLSLPGAGLGAEGVEAVCAALPPKLQALDVG 1132

Query: 286  --------SKKEGSPLA----LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
                    +K  G  L     +K      N L   GA+ LA   +   +LE + +  N +
Sbjct: 1133 SNGCGDQGAKAVGEALKRCANMKRIGLAANELSEVGARALAPFIRDHASLEELHVTGNRV 1192

Query: 334  YHVGITALSDAFEE------------------------------NKNLRHLNLNDNTITY 363
               G +AL+ A                                 ++ L+ L+L+   I  
Sbjct: 1193 GDRGCSALAMAVRSTNAPIVKLALNENFNITAGACKSLAQCIASSRTLQELDLSKVMIGA 1252

Query: 364  KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
            +GA  L   LS+ P+L +L LG C L++ GA  I + L  N +LE + L+ N +  +G  
Sbjct: 1253 EGAKALAAGLSESPALRVLELGSCKLRADGAKFIGEALVRNLSLERLGLSRNSLGDKGVF 1312

Query: 424  DLVKA-MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +LV A ++    L+ +++  N  G EG + +  +++
Sbjct: 1313 ELVAAGLQGSRSLRDLDLRHNSIGPEGAKRLGAMLE 1348



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 1/120 (0%)

Query: 29   ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
            +L+     ++ L+ L+L+   I  +GA  L   LS+ P+L +L LG C L++ GA  I +
Sbjct: 1229 SLAQCIASSRTLQELDLSKVMIGAEGAKALAAGLSESPALRVLELGSCKLRADGAKFIGE 1288

Query: 89   YLTDNTTLEDVNLTCNEISVQGGLDLVKA-MKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
             L  N +LE + L+ N +  +G  +LV A ++    L+ +++  N  G EG + +  +++
Sbjct: 1289 ALVRNLSLERLGLSRNSLGDKGVFELVAAGLQGSRSLRDLDLRHNSIGPEGAKRLGAMLE 1348



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 159/365 (43%), Gaps = 54/365 (14%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-----SLAILNLGDCLLKS 80
            G+ A S + +E      L++        G + L  A++KL      +L  L LG+  L  
Sbjct: 1024 GVPA-SMSVKEGASPYSLDIAGTPCGVPGLVTLSGAVTKLAKGDVATLRFLALGETALGP 1082

Query: 81   AGASSIAKYLTDNTT--LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             G  ++A+ L D +   LE ++L    +  +G   +  A+    KL+ ++V  N  G++G
Sbjct: 1083 KGGIALAEILRDGSCAGLERLSLPGAGLGAEGVEAVCAALP--PKLQALDVGSNGCGDQG 1140

Query: 139  VEEM-EKL-----MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
             + + E L     MK  G+AA  + E      +   +D  S EE                
Sbjct: 1141 AKAVGEALKRCANMKRIGLAANELSEVGARALAPFIRDHASLEE---------------- 1184

Query: 193  SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGV-EGLADLLRS 251
                H   N+  +    +   + +S     T A +V+L L++N     G  + LA  + S
Sbjct: 1185 ---LHVTGNRVGDRGCSALAMAVRS-----TNAPIVKLALNENFNITAGACKSLAQCIAS 1236

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            S    L+EL L+   +G  G K L+  L +         SP AL+V   G  +L  +GAK
Sbjct: 1237 S--RTLQELDLSKVMIGAEGAKALAAGLSE---------SP-ALRVLELGSCKLRADGAK 1284

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDA-FEENKNLRHLNLNDNTITYKGAIPLG 370
             +     +  +LER+ + +N +   G+  L  A  + +++LR L+L  N+I  +GA  LG
Sbjct: 1285 FIGEALVRNLSLERLGLSRNSLGDKGVFELVAAGLQGSRSLRDLDLRHNSIGPEGAKRLG 1344

Query: 371  QALSK 375
              L +
Sbjct: 1345 AMLER 1349



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 2/109 (1%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            LE + +P  G+   G+ A+  A     KL+ L++  N    +GA  +G+AL +  ++  +
Sbjct: 1100 LERLSLPGAGLGAEGVEAVCAALP--PKLQALDVGSNGCGDQGAKAVGEALKRCANMKRI 1157

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             L    L   GA ++A ++ D+ +LE++++T N +  +G   L  A+++
Sbjct: 1158 GLAANELSEVGARALAPFIRDHASLEELHVTGNRVGDRGCSALAMAVRS 1206


>gi|340054486|emb|CCC48783.1| putative leucine-rich repeat protein (LRRP) [Trypanosoma vivax
           Y486]
          Length = 460

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 14/231 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L  LD+S N  GP G + +A LL +     LE+L+L  N LG  G   ++ AL
Sbjct: 173 ALEKNTHLTSLDISLNEIGPNGAKSIAQLLETPSS-PLEKLQLYGNYLGCDGVVHITSAL 231

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                         +LK    G N   +     +A + +   TL  +++  N I   G  
Sbjct: 232 RRNR----------SLKELTLGNNNATDAAMSKVAEMLRDNITLSYLDLRLNTITASGAR 281

Query: 340 ALS-DAFEENKNLRHLNLNDNTITYKGAIPLGQAL--SKLPSLAILNLGDCLLKSAGASS 396
            L+ D    N  L+ L+L+ N I   GA  + +AL  S+ P L  L+L  C L S G + 
Sbjct: 282 TLARDGLANNCFLQSLSLSGNPIGSVGAEQIFRALTGSQGPVLTRLDLSSCELGSVGGTR 341

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
           IA  +T +TT+EDV+L+ N++     + L +++ N   +  +N+S N+ GE
Sbjct: 342 IADLITSSTTIEDVDLSDNQLDDDSAVALSRSLANGLSISALNLSSNKIGE 392



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 3/138 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALS-DAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +A + +   TL ++++  N I   G   L+ D    N  L+ L+L+ N I   GA  + +
Sbjct: 255 VAEMLRDNITLSYLDLRLNTITASGARTLARDGLANNCFLQSLSLSGNPIGSVGAEQIFR 314

Query: 61  AL--SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           AL  S+ P L  L+L  C L S G + IA  +T +TT+EDV+L+ N++     + L +++
Sbjct: 315 ALTGSQGPVLTRLDLSSCELGSVGGTRIADLITSSTTIEDVDLSDNQLDDDSAVALSRSL 374

Query: 119 KNKTKLKQINVSENQFGE 136
            N   +  +N+S N+ GE
Sbjct: 375 ANGLSISALNLSSNKIGE 392



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++  E A+ LAA  +   T+    +  N I   G  AL++    +  L+ L++  N +T
Sbjct: 77  NQIGPEQAQKLAAALEA-STVREALLCFNDIGKDGCDALANVVNVSVKLQLLDIRGNNLT 135

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            K    L +++S   SL  L LG   L   GA+ + + L  NT L  ++++ NEI   G 
Sbjct: 136 PKCVRKLLKSISMSTSLTRLGLGSNKLGEEGAALLLRALEKNTHLTSLDISLNEIGPNGA 195

Query: 423 LDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMK 458
             + + ++   + L+++ +  N  G +GV  +   ++
Sbjct: 196 KSIAQLLETPSSPLEKLQLYGNYLGCDGVVHITSALR 232



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 1/129 (0%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  AL++    + KL+ L++  N +T K    L +++S   SL  L LG   L 
Sbjct: 104 NDIGKDGCDALANVVNVSVKLQLLDIRGNNLTPKCVRKLLKSISMSTSLTRLGLGSNKLG 163

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEG 138
             GA+ + + L  NT L  ++++ NEI   G   + + ++   + L+++ +  N  G +G
Sbjct: 164 EEGAALLLRALEKNTHLTSLDISLNEIGPNGAKSIAQLLETPSSPLEKLQLYGNYLGCDG 223

Query: 139 VEEMEKLMK 147
           V  +   ++
Sbjct: 224 VVHITSALR 232


>gi|320170062|gb|EFW46961.1| tyrosine-protein kinase transforming protein Abl [Capsaspora
           owczarzaki ATCC 30864]
          Length = 741

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 171/410 (41%), Gaps = 60/410 (14%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+ +A + N  L  L L  N I   GA  +  AL    SL +L+L    + SAGA +I +
Sbjct: 45  AIGEALQVNLALTELKLRVNQIGDAGARAIAGALGANRSLILLDLFRNQIGSAGAQAIGE 104

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L  N TL    L+ N +   G  ++ +A+K  TKL  I ++EN+ G+ GV+ + + ++ 
Sbjct: 105 ALKTNNTLTKFYLSDNRLGDAGAREISEALKVNTKLAGIYLNENRIGDAGVQAIGEALRV 164

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
                 LV                               LSHN      +A  ++  +  
Sbjct: 165 NKTLTKLV-------------------------------LSHNQIG---DAGARAIGDVL 190

Query: 209 QSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
           Q + T             L  L L  N  GP G + +   L ++    L +L L+ N LG
Sbjct: 191 QVNRT-------------LTSLVLWTNQIGPAGAQAIGRTLATNTT--LTQLHLSKNQLG 235

Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
             G + L +A+        +  + L L       N++ + GA+ +A   K   TL  + +
Sbjct: 236 DAGAQALGEAMK-----VNRTLTQLDLHT-----NQIGDTGAQTIADALKVNSTLVEIFL 285

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
             N I   G  A+ +A   N+ L  L+L +N +   GA  +G AL    +L  LNL    
Sbjct: 286 DTNHIGDAGACAIGEALNVNRTLAELSLKENQVGDAGARAIGDALQVNKTLTKLNLQRNF 345

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAMKNKTKLKQ 437
           + S G S++ +       LE  +       + GG D V +A++  +K KQ
Sbjct: 346 ISSHGLSALKQTKKSTCQLELADQRTAADRIGGGPDRVYEAVQMPSKGKQ 395



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L EL L  N  G  G   +A  L ++    L  L L  N +G  G + + +AL
Sbjct: 49  ALQVNLALTELKLRVNQIGDAGARAIAGALGANRSLIL--LDLFRNQIGSAGAQAIGEAL 106

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 +K          F    NRL + GA+ ++   K    L  + + +N I   G+ 
Sbjct: 107 KTNNTLTK----------FYLSDNRLGDAGAREISEALKVNTKLAGIYLNENRIGDAGVQ 156

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+ +A   NK L  L L+ N I   GA  +G  L    +L  L L    +  AGA +I +
Sbjct: 157 AIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVLWTNQIGPAGAQAIGR 216

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NTTL  ++L+ N++   G   L +AMK    L Q+++  NQ G+ G + +   +K
Sbjct: 217 TLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIADALK 275



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 12/223 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L+ LDL  N  G  G + + + L+++    L +  L++N LG  G + +S+AL       
Sbjct: 84  LILLDLFRNQIGSAGAQAIGEALKTNNT--LTKFYLSDNRLGDAGAREISEAL------- 134

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            K  + LA  +++   NR+ + G + +    +  KTL ++ +  N I   G  A+ D  +
Sbjct: 135 -KVNTKLA-GIYL-NENRIGDAGVQAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQ 191

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N+ L  L L  N I   GA  +G+ L+   +L  L+L    L  AGA ++ + +  N T
Sbjct: 192 VNRTLTSLVLWTNQIGPAGAQAIGRTLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRT 251

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           L  ++L  N+I   G   +  A+K  + L +I +  N  G+ G
Sbjct: 252 LTQLDLHTNQIGDTGAQTIADALKVNSTLVEIFLDTNHIGDAG 294



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 168/403 (41%), Gaps = 61/403 (15%)

Query: 32  DAFEENKKLR-HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 90
           + +++ +K R   +L +  I    A  +G+AL    +L  L L    +  AGA +IA  L
Sbjct: 19  NVYDQARKARGAYSLENQQIGDAEAQAIGEALQVNLALTELKLRVNQIGDAGARAIAGAL 78

Query: 91  TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 150
             N +L  ++L  N+I   G   + +A+K    L +  +S+N+ G+ G  E+ + +K   
Sbjct: 79  GANRSLILLDLFRNQIGSAGAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEALKVNT 138

Query: 151 MAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQS 210
             A + L +                                  N   +A  Q+   + + 
Sbjct: 139 KLAGIYLNE----------------------------------NRIGDAGVQAIGEALRV 164

Query: 211 HNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGIT 270
           + T             L +L LS N  G  G   + D+L+ +    L  L L  N +G  
Sbjct: 165 NKT-------------LTKLVLSHNQIGDAGARAIGDVLQVNRT--LTSLVLWTNQIGPA 209

Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
           G + + + L           +   L      +N+L + GA+ L    K  +TL ++++  
Sbjct: 210 GAQAIGRTL----------ATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHT 259

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N I   G   ++DA + N  L  + L+ N I   GA  +G+AL+   +LA L+L +  + 
Sbjct: 260 NQIGDTGAQTIADALKVNSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELSLKENQVG 319

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            AGA +I   L  N TL  +NL  N IS   GL  +K  K  T
Sbjct: 320 DAGARAIGDALQVNKTLTKLNLQRNFISSH-GLSALKQTKKST 361



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 146/360 (40%), Gaps = 59/360 (16%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N I   G  A++ A   N+ L  L+L  N I   GA  +G+AL    +L   
Sbjct: 56  LTELKLRVNQIGDAGARAIAGALGANRSLILLDLFRNQIGSAGAQAIGEALKTNNTLTKF 115

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            L D  L  AGA  I++ L  NT L  + L  N I   G   + +A++    L ++ +S 
Sbjct: 116 YLSDNRLGDAGAREISEALKVNTKLAGIYLNENRIGDAGVQAIGEALRVNKTLTKLVLSH 175

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           NQ G+ G   +  +++      +LVL                                  
Sbjct: 176 NQIGDAGARAIGDVLQVNRTLTSLVLW--------------------------------- 202

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
            +N    A  Q+                +L T   L +L LS N  G  G + L + ++ 
Sbjct: 203 -TNQIGPAGAQAIGR-------------TLATNTTLTQLHLSKNQLGDAGAQALGEAMKV 248

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           +    L +L L+ N +G TG + ++ AL        K  S L +++F+   N + + GA 
Sbjct: 249 NRT--LTQLDLHTNQIGDTGAQTIADAL--------KVNSTL-VEIFL-DTNHIGDAGAC 296

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            +       +TL  + + +N +   G  A+ DA + NK L  LNL  N I+  G   L Q
Sbjct: 297 AIGEALNVNRTLAELSLKENQVGDAGARAIGDALQVNKTLTKLNLQRNFISSHGLSALKQ 356



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 12/234 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LKT   L +  LSDN  G  G   +++ L+ +   A   + LN N +G  G + + +AL
Sbjct: 105 ALKTNNTLTKFYLSDNRLGDAGAREISEALKVNTKLA--GIYLNENRIGDAGVQAIGEAL 162

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 +K           +   N++ + GA+ +  V +  +TL  + +  N I   G  
Sbjct: 163 RVNKTLTK----------LVLSHNQIGDAGARAIGDVLQVNRTLTSLVLWTNQIGPAGAQ 212

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+      N  L  L+L+ N +   GA  LG+A+    +L  L+L    +   GA +IA 
Sbjct: 213 AIGRTLATNTTLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIAD 272

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            L  N+TL ++ L  N I   G   + +A+     L ++++ ENQ G+ G   +
Sbjct: 273 ALKVNSTLVEIFLDTNHIGDAGACAIGEALNVNRTLAELSLKENQVGDAGARAI 326



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 114/240 (47%), Gaps = 12/240 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK   +L  + L++N  G  GV+ + + LR +    L +L L++N +G  G    ++A+
Sbjct: 133 ALKVNTKLAGIYLNENRIGDAGVQAIGEALRVNKT--LTKLVLSHNQIGDAG----ARAI 186

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            D  + ++       L   +   N++   GA+ +        TL ++ + +N +   G  
Sbjct: 187 GDVLQVNR------TLTSLVLWTNQIGPAGAQAIGRTLATNTTLTQLHLSKNQLGDAGAQ 240

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL +A + N+ L  L+L+ N I   GA  +  AL    +L  + L    +  AGA +I +
Sbjct: 241 ALGEAMKVNRTLTQLDLHTNQIGDTGAQTIADALKVNSTLVEIFLDTNHIGDAGACAIGE 300

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  N TL +++L  N++   G   +  A++    L ++N+  N     G+  +++  KS
Sbjct: 301 ALNVNRTLAELSLKENQVGDAGARAIGDALQVNKTLTKLNLQRNFISSHGLSALKQTKKS 360



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL    +  N +   G   +S+A + N KL  + LN+N I   G   +G+AL    +L  
Sbjct: 111 TLTKFYLSDNRLGDAGAREISEALKVNTKLAGIYLNENRIGDAGVQAIGEALRVNKTLTK 170

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    +  AGA +I   L  N TL  + L  N+I   G   + + +   T L Q+++S
Sbjct: 171 LVLSHNQIGDAGARAIGDVLQVNRTLTSLVLWTNQIGPAGAQAIGRTLATNTTLTQLHLS 230

Query: 131 ENQFGEEGVEEMEKLMK 147
           +NQ G+ G + + + MK
Sbjct: 231 KNQLGDAGAQALGEAMK 247



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 68/133 (51%)

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+ +A + N  L  L L  N I   GA  +  AL    SL +L+L    + SAGA +I +
Sbjct: 45  AIGEALQVNLALTELKLRVNQIGDAGARAIAGALGANRSLILLDLFRNQIGSAGAQAIGE 104

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  N TL    L+ N +   G  ++ +A+K  TKL  I ++EN+ G+ GV+ + + ++ 
Sbjct: 105 ALKTNNTLTKFYLSDNRLGDAGAREISEALKVNTKLAGIYLNENRIGDAGVQAIGEALRV 164

Query: 460 FGMAAALVLEDDE 472
                 LVL  ++
Sbjct: 165 NKTLTKLVLSHNQ 177



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 138/333 (41%), Gaps = 61/333 (18%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++L  +++ +N I   G  A+ +A + N  L    L+DN +   GA  + +AL     LA
Sbjct: 82  RSLILLDLFRNQIGSAGAQAIGEALKTNNTLTKFYLSDNRLGDAGAREISEALKVNTKLA 141

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            + L +  +  AG  +I + L  N TL  + L+ N+I   G   +   ++    L  + +
Sbjct: 142 GIYLNENRIGDAGVQAIGEALRVNKTLTKLVLSHNQIGDAGARAIGDVLQVNRTLTSLVL 201

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
             NQ G  G + + + + +                                    N+ L+
Sbjct: 202 WTNQIGPAGAQAIGRTLAT------------------------------------NTTLT 225

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
                       Q H + NQ  +   Q+   ++K    L +LDL  N  G  G + +AD 
Sbjct: 226 ------------QLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIADA 273

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L+ +    L E+ L+ N +G  G   + +AL+       +  + L+LK      N++ + 
Sbjct: 274 LKVNST--LVEIFLDTNHIGDAGACAIGEALN-----VNRTLAELSLK-----ENQVGDA 321

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
           GA+ +    +  KTL ++ + +N I   G++AL
Sbjct: 322 GARAIGDALQVNKTLTKLNLQRNFISSHGLSAL 354



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 72/150 (48%)

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           L  +++  N I   G  A++ A   N++L  L+L  N I   GA  +G+AL    +L   
Sbjct: 56  LTELKLRVNQIGDAGARAIAGALGANRSLILLDLFRNQIGSAGAQAIGEALKTNNTLTKF 115

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
            L D  L  AGA  I++ L  NT L  + L  N I   G   + +A++    L ++ +S 
Sbjct: 116 YLSDNRLGDAGAREISEALKVNTKLAGIYLNENRIGDAGVQAIGEALRVNKTLTKLVLSH 175

Query: 443 NQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           NQ G+ G   +  +++      +LVL  ++
Sbjct: 176 NQIGDAGARAIGDVLQVNRTLTSLVLWTNQ 205



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  +++  N I   G   ++DA + N  L  + L+ N I   GA  +G+AL+   +LA
Sbjct: 250 RTLTQLDLHTNQIGDTGAQTIADALKVNSTLVEIFLDTNHIGDAGACAIGEALNVNRTLA 309

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
            L+L +  +  AGA +I   L  N TL  +NL  N IS   GL  +K  K  T
Sbjct: 310 ELSLKENQVGDAGARAIGDALQVNKTLTKLNLQRNFISSH-GLSALKQTKKST 361



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + + +N +   G  AL +A + N+ L  L+L+ N I   GA  +  AL    +L  
Sbjct: 223 TLTQLHLSKNQLGDAGAQALGEAMKVNRTLTQLDLHTNQIGDTGAQTIADALKVNSTLVE 282

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           + L    +  AGA +I + L  N TL +++L  N++   G   +  A++    L ++N+ 
Sbjct: 283 IFLDTNHIGDAGACAIGEALNVNRTLAELSLKENQVGDAGARAIGDALQVNKTLTKLNLQ 342

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N     G+  +++  KS
Sbjct: 343 RNFISSHGLSALKQTKKS 360


>gi|156369685|ref|XP_001628105.1| predicted protein [Nematostella vectensis]
 gi|156215073|gb|EDO36042.1| predicted protein [Nematostella vectensis]
          Length = 681

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 12/241 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDL+DN  G  G   LA++L  +C   + E+ L+ N +   G    +K LH         
Sbjct: 301 LDLTDNYIGGPGGMALAEMLYDNCF--ITEIDLSMNFIRSEGGLAFAKMLHKNQ------ 352

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
               +L+  +   N L ++ AK  A   K+ +TL  +++  N I  +G   L      N 
Sbjct: 353 ----SLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEIGEMGGIFLGAGVASNY 408

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L+HL+L+ N I +KGA+ + QAL     L   N+    L   G  ++ ++L  N  L++
Sbjct: 409 GLKHLDLSWNCIRFKGAVGMAQALKTNDCLTHFNMSWNGLSLLGCVALGRFLKRNEALKE 468

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           ++++ N I +     L + +     L  + V +N  G+ GVE +  ++K+      L LE
Sbjct: 469 LDISNNRIGLLATQKLAQGIAAHPNLTALKVGKNPIGDGGVECLLNVIKAHDKLKYLSLE 528

Query: 470 D 470
           D
Sbjct: 529 D 529



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 77/158 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A   K+ +TL H+++  N I  +G   L      N  L+HL+L+ N I +KGA+ + QA
Sbjct: 372 FAEALKENRTLLHLDLSHNEIGEMGGIFLGAGVASNYGLKHLDLSWNCIRFKGAVGMAQA 431

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L   N+    L   G  ++ ++L  N  L++++++ N I +     L + +   
Sbjct: 432 LKTNDCLTHFNMSWNGLSLLGCVALGRFLKRNEALKELDISNNRIGLLATQKLAQGIAAH 491

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
             L  + V +N  G+ GVE +  ++K+      L LED
Sbjct: 492 PNLTALKVGKNPIGDGGVECLLNVIKAHDKLKYLSLED 529



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 69/134 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A +  K ++L  + +  N +      A ++A +EN+ L HL+L+ N I   G I LG  
Sbjct: 344 FAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEIGEMGGIFLGAG 403

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           ++    L  L+L    ++  GA  +A+ L  N  L   N++ N +S+ G + L + +K  
Sbjct: 404 VASNYGLKHLDLSWNCIRFKGAVGMAQALKTNDCLTHFNMSWNGLSLLGCVALGRFLKRN 463

Query: 122 TKLKQINVSENQFG 135
             LK++++S N+ G
Sbjct: 464 EALKELDISNNRIG 477



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 31/287 (10%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           L + G  +IAK L  NT  E+++LT N I   GG+ L + + +   + +I++S N    E
Sbjct: 280 LGAEGTLAIAKSLMKNTYTENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLSMNFIRSE 339

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G     K++        LVL  +     D +   E+ +EN +    D   LSHN+     
Sbjct: 340 GGLAFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLD---LSHNEIGEMG 396

Query: 198 NASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
                +   SN                  L  LDLS N     G  G+A  L+++ C  L
Sbjct: 397 GIFLGAGVASNYG----------------LKHLDLSWNCIRFKGAVGMAQALKTNDC--L 438

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
               ++ NGL + GC  L + L       + E    ALK      NR+     + LA   
Sbjct: 439 THFNMSWNGLSLLGCVALGRFL------KRNE----ALKELDISNNRIGLLATQKLAQGI 488

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
                L  +++ +N I   G+  L +  + +  L++L+L D T++ K
Sbjct: 489 AAHPNLTALKVGKNPIGDGGVECLLNVIKAHDKLKYLSLEDITVSPK 535



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 72/152 (47%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           EG   +A    K    E +++  N I   G  AL++   +N  +  ++L+ N I  +G +
Sbjct: 283 EGTLAIAKSLMKNTYTENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLSMNFIRSEGGL 342

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
              + L K  SL  L L    L    A + A+ L +N TL  ++L+ NEI   GG+ L  
Sbjct: 343 AFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEIGEMGGIFLGA 402

Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            + +   LK +++S N    +G   M + +K+
Sbjct: 403 GVASNYGLKHLDLSWNCIRFKGAVGMAQALKT 434



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E++++  N I   G  AL++   +N  +  ++L+ N I  +G +   + L K  SL  L 
Sbjct: 299 ENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLSMNFIRSEGGLAFAKMLHKNQSLRKLV 358

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    L    A + A+ L +N TL  ++L+ NEI   GG+ L   + +   LK +++S N
Sbjct: 359 LRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEIGEMGGIFLGAGVASNYGLKHLDLSWN 418

Query: 133 QFGEEGVEEMEKLMKS 148
               +G   M + +K+
Sbjct: 419 CIRFKGAVGMAQALKT 434



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%)

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + M  +G+   G  A++ +  +N    +L+L DN I   G + L + L     +  ++L 
Sbjct: 273 IVMRHHGLGAEGTLAIAKSLMKNTYTENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLS 332

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
              ++S G  + AK L  N +L  + L  N ++ +      +A+K    L  +++S N+ 
Sbjct: 333 MNFIRSEGGLAFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEI 392

Query: 446 GEEG 449
           GE G
Sbjct: 393 GEMG 396



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           + M  +G+   G  A++ +  +N    +L+L DN I   G + L + L     +  ++L 
Sbjct: 273 IVMRHHGLGAEGTLAIAKSLMKNTYTENLDLTDNYIGGPGGMALAEMLYDNCFITEIDLS 332

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              ++S G  + AK L  N +L  + L  N ++ +      +A+K    L  +++S N+ 
Sbjct: 333 MNFIRSEGGLAFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHLDLSHNEI 392

Query: 135 GEEG 138
           GE G
Sbjct: 393 GEMG 396



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K    L H  M  NG+  +G  AL    + N+ L+ L++++N I       L Q 
Sbjct: 428 MAQALKTNDCLTHFNMSWNGLSLLGCVALGRFLKRNEALKELDISNNRIGLLATQKLAQG 487

Query: 62  LSKLPSLAILNLG---------DCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           ++  P+L  L +G         +CLL    A    KYL    +LED+ ++
Sbjct: 488 IAAHPNLTALKVGKNPIGDGGVECLLNVIKAHDKLKYL----SLEDITVS 533



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 61/136 (44%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +  +++  N I   G  A +    +N+ LR L L  N +T K A    +AL +  +L  L
Sbjct: 326 ITEIDLSMNFIRSEGGLAFAKMLHKNQSLRKLVLRSNHLTDKDAKAFAEALKENRTLLHL 385

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    +   G   +   +  N  L+ ++L+ N I  +G + + +A+K    L   N+S 
Sbjct: 386 DLSHNEIGEMGGIFLGAGVASNYGLKHLDLSWNCIRFKGAVGMAQALKTNDCLTHFNMSW 445

Query: 132 NQFGEEGVEEMEKLMK 147
           N     G   + + +K
Sbjct: 446 NGLSLLGCVALGRFLK 461


>gi|326432833|gb|EGD78403.1| hypothetical protein PTSG_09099 [Salpingoeca sp. ATCC 50818]
          Length = 1133

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 14/213 (6%)

Query: 258 EELKLNNNGLGITGCKLLSKALHD--CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           +++    + LG++G K L++AL D  C            L+V     N + NEG   LA 
Sbjct: 45  DKVSFWRDRLGVSGAKALAEALKDNTC------------LRVLNLWDNVIGNEGTVALAK 92

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           + K   TL  +++  + I  VG  AL+   + N  +  L L++N I  +GA+ L + L  
Sbjct: 93  MLKHNTTLTSLDLKSSRIGPVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKH 152

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             ++A L L    +   GA ++AK L  NTT+  + L  N I  +G + L K +K+ T +
Sbjct: 153 NTTMATLILKSSRIGPVGAVALAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHNTTM 212

Query: 436 KQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
             +NVS N   E G+  + K ++     A + L
Sbjct: 213 TTLNVSHNHITEPGMVNVLKQLQGMDAQAKIRL 245



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K   TL  +++  + I  VG  AL+   + N  +  L L++N I  +GA+ L + 
Sbjct: 90  LAKMLKHNTTLTSLDLKSSRIGPVGAVALAKMLKHNTTMATLILDNNDIGSEGAVALAKM 149

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++A L L    +   GA ++AK L  NTT+  + L  N I  +G + L K +K+ 
Sbjct: 150 LKHNTTMATLILKSSRIGPVGAVALAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHN 209

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
           T +  +NVS N   E G+  + K ++     A + L
Sbjct: 210 TTMTTLNVSHNHITEPGMVNVLKQLQGMDAQAKIRL 245



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 65/122 (53%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  AL++A ++N  LR LNL DN I  +G + L + L    +L  L+L    +   GA +
Sbjct: 58  GAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIGPVGAVA 117

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +AK L  NTT+  + L  N+I  +G + L K +K+ T +  + +  ++ G  G   + K 
Sbjct: 118 LAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGAVALAKT 177

Query: 146 MK 147
           ++
Sbjct: 178 LQ 179



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 15/194 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  LDL  +  GP+G   LA +L+ +   A   L L+NN +G  G   L+K L 
Sbjct: 94  LKHNTTLTSLDLKSSRIGPVGAVALAKMLKHNTTMA--TLILDNNDIGSEGAVALAKML- 150

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                  K  + +A    I   +R+   GA  LA   +   T+  +E+  N I + G  A
Sbjct: 151 -------KHNTTMA--TLILKSSRIGPVGAVALAKTLQHNTTITSLELYNNNIGNKGAVA 201

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+   + N  +  LN++ N IT  G + + + L  + + A + L +  L+S  ++S+A+ 
Sbjct: 202 LAKMLKHNTTMTTLNVSHNHITEPGMVNVLKQLQGMDAQAKIRLFEFKLES--STSVART 259

Query: 401 L-TDNTTLEDVNLT 413
           L T  T   D+N+ 
Sbjct: 260 LATLRTKRPDINVV 273



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           GA  L +AL     L +LNL D ++ + G  ++AK L  NTTL  ++L  + I   G + 
Sbjct: 58  GAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIGPVGAVA 117

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           L K +K+ T +  + +  N  G EG   + K++K     A L+L+
Sbjct: 118 LAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILK 162



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%)

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           GA  L +AL     L +LNL D ++ + G  ++AK L  NTTL  ++L  + I   G + 
Sbjct: 58  GAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIGPVGAVA 117

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           L K +K+ T +  + +  N  G EG   + K++K     A L+L+
Sbjct: 118 LAKMLKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILK 162



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 70/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K    L  + +  N I + G  AL+   + N  L  L+L  + I   GA+ L + 
Sbjct: 62  LAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIGPVGAVALAKM 121

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++A L L +  + S GA ++AK L  NTT+  + L  + I   G + L K +++ 
Sbjct: 122 LKHNTTMATLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGAVALAKTLQHN 181

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T +  + +  N  G +G   + K++K
Sbjct: 182 TTITSLELYNNNIGNKGAVALAKMLK 207



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 15/241 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L+L DN  G  G   LA +L+ +    L  L L ++ +G  G   L+K L
Sbjct: 65  ALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNT--TLTSLDLKSSRIGPVGAVALAKML 122

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + +A    I   N + +EGA  LA + K   T+  + +  + I  VG  
Sbjct: 123 --------KHNTTMA--TLILDNNDIGSEGAVALAKMLKHNTTMATLILKSSRIGPVGAV 172

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL+   + N  +  L L +N I  KGA+ L + L    ++  LN+    +   G  ++ K
Sbjct: 173 ALAKTLQHNTTITSLELYNNNIGNKGAVALAKMLKHNTTMTTLNVSHNHITEPGMVNVLK 232

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEMEKLMK 458
            L        + L   E  ++    + + +   +TK   INV  +++  E  +E +   K
Sbjct: 233 QLQGMDAQAKIRLF--EFKLESSTSVARTLATLRTKRPDINVVFSKWYFETEDEFDSSAK 290

Query: 459 S 459
           +
Sbjct: 291 A 291



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 48/84 (57%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           L  +GA ++A+ L DNT L  +NL  N I  +G + L K +K+ T L  +++  ++ G  
Sbjct: 54  LGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIGPV 113

Query: 138 GVEEMEKLMKSFGMAAALVLEDDE 161
           G   + K++K     A L+L++++
Sbjct: 114 GAVALAKMLKHNTTMATLILDNND 137



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 48/84 (57%)

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           L  +GA ++A+ L DNT L  +NL  N I  +G + L K +K+ T L  +++  ++ G  
Sbjct: 54  LGVSGAKALAEALKDNTCLRVLNLWDNVIGNEGTVALAKMLKHNTTLTSLDLKSSRIGPV 113

Query: 449 GVEEMEKLMKSFGMAAALVLEDDE 472
           G   + K++K     A L+L++++
Sbjct: 114 GAVALAKMLKHNTTMATLILDNND 137


>gi|412989079|emb|CCO15670.1| predicted protein [Bathycoccus prasinos]
          Length = 532

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 130/308 (42%), Gaps = 73/308 (23%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L E+DLSDNAFG  GV   A LL+S     LE +   NNG+     + +S+ L      
Sbjct: 215 KLKEVDLSDNAFGEKGVRACAKLLQSQS--TLEGISFLNNGISEQAARAISELL------ 266

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                SP  LK +   +N   +EG   +AAV +K   +E  +M  +     G   L+ A 
Sbjct: 267 ----ASPATLKKYHLDKNMTGDEGTVHVAAVLEKATGIEDFKMAGSRFTSDGALMLAKAL 322

Query: 346 EENKNLRHLNLNDNTITYKG--------------------AIPLGQ-------------- 371
               +L+ LNL DN +  +G                    A  LG+              
Sbjct: 323 LHGSSLKKLNLTDNNVNEEGGEAFLEVFKKHSKLEYLNLEATALGEEITGKVTQVVAEHC 382

Query: 372 -----------------------ALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTL 407
                                   ++K+  L +L + D  L  AG + I   L T    L
Sbjct: 383 PDLETLILSANDILREGVDSVAEGIAKMKKLKVLKITDNELGDAGVAKICVALQTSAAKL 442

Query: 408 EDVNLTCNEISVQGGLDLVK--AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 465
           E+++++CNEIS  G   + K  A   K+ +K++N+ +N   E+ +E ++K+    G+ + 
Sbjct: 443 EELDVSCNEISKSGAEAVSKLAATSLKSTIKKVNLDQNWIQEDAIESIQKIFADAGLDSV 502

Query: 466 L-VLEDDE 472
           L  LED++
Sbjct: 503 LQALEDND 510



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 8/233 (3%)

Query: 228 VELDLSDNAF--GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           V LD +D  F  GP   E LA LL+ +  F    ++L+    GI   K+  KA    +E+
Sbjct: 125 VALDSTDREFYTGPRAEEVLAPLLQPNASFKF--VRLSTKSWGIDAAKVAKKA----FEN 178

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
            K     + L   IAGR  +E   A  +      +  L+ V++  N     G+ A +   
Sbjct: 179 LKGTLEVVDLADTIAGRPEVEALKAMEIMCEGLSVCKLKEVDLSDNAFGEKGVRACAKLL 238

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
           +    L  ++  +N I+ + A  + + L+   +L   +L   +    G   +A  L   T
Sbjct: 239 QSQSTLEGISFLNNGISEQAARAISELLASPATLKKYHLDKNMTGDEGTVHVAAVLEKAT 298

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +ED  +  +  +  G L L KA+ + + LK++N+++N   EEG E   ++ K
Sbjct: 299 GIEDFKMAGSRFTSDGALMLAKALLHGSSLKKLNLTDNNVNEEGGEAFLEVFK 351



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 7/174 (4%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALS 63
           VFKK   LE++ +    +       ++    E+   L  L L+ N I  +G   + + ++
Sbjct: 349 VFKKHSKLEYLNLEATALGEEITGKVTQVVAEHCPDLETLILSANDILREGVDSVAEGIA 408

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVK--AMKN 120
           K+  L +L + D  L  AG + I   L T    LE+++++CNEIS  G   + K  A   
Sbjct: 409 KMKKLKVLKITDNELGDAGVAKICVALQTSAAKLEELDVSCNEISKSGAEAVSKLAATSL 468

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL-VLEDD--EGECSDEEQDE 171
           K+ +K++N+ +N   E+ +E ++K+    G+ + L  LED+  +GE  ++E DE
Sbjct: 469 KSTIKKVNLDQNWIQEDAIESIQKIFADAGLDSVLQALEDNDPDGEPDEDEADE 522



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A + +   TLE +    NGI      A+S+       L+  +L+ N    +G + +   L
Sbjct: 235 AKLLQSQSTLEGISFLNNGISEQAARAISELLASPATLKKYHLDKNMTGDEGTVHVAAVL 294

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
            K   +    +      S GA  +AK L   ++L+ +NLT N ++ +GG   ++  K  +
Sbjct: 295 EKATGIEDFKMAGSRFTSDGALMLAKALLHGSSLKKLNLTDNNVNEEGGEAFLEVFKKHS 354

Query: 123 KLKQINVSENQFGEE 137
           KL+ +N+     GEE
Sbjct: 355 KLEYLNLEATALGEE 369



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 64/136 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ V++  N     G+ A +   +    L  ++  +N I+ + A  + + L+   +L   
Sbjct: 216 LKEVDLSDNAFGEKGVRACAKLLQSQSTLEGISFLNNGISEQAARAISELLASPATLKKY 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L   +    G   +A  L   T +ED  +  +  +  G L L KA+ + + LK++N+++
Sbjct: 276 HLDKNMTGDEGTVHVAAVLEKATGIEDFKMAGSRFTSDGALMLAKALLHGSSLKKLNLTD 335

Query: 132 NQFGEEGVEEMEKLMK 147
           N   EEG E   ++ K
Sbjct: 336 NNVNEEGGEAFLEVFK 351


>gi|320163875|gb|EFW40774.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 482

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 12/233 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  L L +N  G IG + +A+ L+ +    L +L L  N +G  G + +++AL 
Sbjct: 45  LKVNKALTWLYLYENQLGDIGAQAIAEALKVNTT--LIKLNLPENQIGEAGAQAIAEALK 102

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                +K   S           N++ ++ AK  A   K  KTL R+++ Q  I   G  A
Sbjct: 103 VNTTLTKLNLS----------WNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDTGAQA 152

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++A + N  L  LNL+ N I   GA+ +  AL    ++  + L    +  AGA +IA+ 
Sbjct: 153 IAEALKVNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEV 212

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           L  NTTL ++ L+ N+I   G   + +A+K    L  + +  NQ G+ G + +
Sbjct: 213 LKVNTTLTELGLSENQIGDAGAQAIAEAIKVNKILTNLELGWNQIGDAGAQAI 265



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%)

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
           AL       N+L + GA+ +A   K   TL ++ +P+N I   G  A+++A + N  L  
Sbjct: 50  ALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLNLPENQIGEAGAQAIAEALKVNTTLTK 109

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           LNL+ N +    A    +AL    +L  L L    +   GA +IA+ L  NTTL  +NL+
Sbjct: 110 LNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDTGAQAIAEALKVNTTLTKLNLS 169

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            N+I   G + +  A+K    +  I +S NQ G+ G   + +++K
Sbjct: 170 WNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEVLK 214



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 73/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +P+N I   G  A+++A + N  L  LNL+ N +    A    +A
Sbjct: 69  IAEALKVNTTLIKLNLPENQIGEAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEA 128

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    +   GA +IA+ L  NTTL  +NL+ N+I   G + +  A+K  
Sbjct: 129 LKVNKTLTRLKLHQVQIGDTGAQAIAEALKVNTTLTKLNLSWNQIGGAGAVAIADALKLN 188

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             +  I +S NQ G+ G   + +++K
Sbjct: 189 KTVTTIYLSGNQIGDAGARAIAEVLK 214



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 12/220 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L++L+L +N  G  G + +A+ L+ +    L +L L+ N +G    K  ++AL
Sbjct: 72  ALKVNTTLIKLNLPENQIGEAGAQAIAEALKVNTT--LTKLNLSWNQVGDDAAKAFAEAL 129

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +   LK+    + ++ + GA+ +A   K   TL ++ +  N I   G  
Sbjct: 130 -------KVNKTLTRLKLH---QVQIGDTGAQAIAEALKVNTTLTKLNLSWNQIGGAGAV 179

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++DA + NK +  + L+ N I   GA  + + L    +L  L L +  +  AGA +IA+
Sbjct: 180 AIADALKLNKTVTTIYLSGNQIGDAGARAIAEVLKVNTTLTELGLSENQIGDAGAQAIAE 239

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +  N  L ++ L  N+I   G   + +A++  T L ++N
Sbjct: 240 AIKVNKILTNLELGWNQIGDAGAQAIAEAIELGTTLTRLN 279



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A   K  KTL  +++ Q  I   G  A+++A + N  L  LNL+ N I   GA+ +  A
Sbjct: 125 FAEALKVNKTLTRLKLHQVQIGDTGAQAIAEALKVNTTLTKLNLSWNQIGGAGAVAIADA 184

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  + L    +  AGA +IA+ L  NTTL ++ L+ N+I   G   + +A+K  
Sbjct: 185 LKLNKTVTTIYLSGNQIGDAGARAIAEVLKVNTTLTELGLSENQIGDAGAQAIAEAIKVN 244

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             L  + +  NQ G+ G + +
Sbjct: 245 KILTNLELGWNQIGDAGAQAI 265



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 7/182 (3%)

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
           + L+DC+++ K   S L++  F  G        A++LA   K  K L  + + +N +  +
Sbjct: 12  RELYDCFKNEKD--SALSVHDFEFGEVE-----AEVLAEGLKVNKALTWLYLYENQLGDI 64

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G  A+++A + N  L  LNL +N I   GA  + +AL    +L  LNL    +    A +
Sbjct: 65  GAQAIAEALKVNTTLIKLNLPENQIGEAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKA 124

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
            A+ L  N TL  + L   +I   G   + +A+K  T L ++N+S NQ G  G   +   
Sbjct: 125 FAEALKVNKTLTRLKLHQVQIGDTGAQAIAEALKVNTTLTKLNLSWNQIGGAGAVAIADA 184

Query: 457 MK 458
           +K
Sbjct: 185 LK 186



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 71/147 (48%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA   K  K L  + + +N +  +G  A+++A + N  L  LNL +N I   GA  + +
Sbjct: 40  VLAEGLKVNKALTWLYLYENQLGDIGAQAIAEALKVNTTLIKLNLPENQIGEAGAQAIAE 99

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  LNL    +    A + A+ L  N TL  + L   +I   G   + +A+K 
Sbjct: 100 ALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDTGAQAIAEALKV 159

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
            T L ++N+S NQ G  G   +   +K
Sbjct: 160 NTTLTKLNLSWNQIGGAGAVAIADALK 186



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 12/199 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L +L+LS N  G    +  A+ L+ +    L  LKL+   +G TG + +++AL
Sbjct: 100 ALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKT--LTRLKLHQVQIGDTGAQAIAEAL 157

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 +K   S           N++   GA  +A   K  KT+  + +  N I   G  
Sbjct: 158 KVNTTLTKLNLS----------WNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGAR 207

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++  + N  L  L L++N I   GA  + +A+     L  L LG   +  AGA +IA+
Sbjct: 208 AIAEVLKVNTTLTELGLSENQIGDAGAQAIAEAIKVNKILTNLELGWNQIGDAGAQAIAE 267

Query: 400 YLTDNTTLEDVNLTCNEIS 418
            +   TTL  +N     I+
Sbjct: 268 AIELGTTLTRLNAVAQLIT 286



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 18/262 (6%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L D F+ N+K   L+++D       A  L + L    +L  L L +  L   GA +IA+ 
Sbjct: 14  LYDCFK-NEKDSALSVHDFEFGEVEAEVLAEGLKVNKALTWLYLYENQLGDIGAQAIAEA 72

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L  NTTL  +NL  N+I   G   + +A+K  T L ++N+S NQ G++  +   + +K  
Sbjct: 73  LKVNTTLIKLNLPENQIGEAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEALKVN 132

Query: 150 GMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN-----------DSNHSHN 198
                L L   +   +  +   E+ + N +  +    NLS N           D+   + 
Sbjct: 133 KTLTRLKLHQVQIGDTGAQAIAEALKVNTTLTK---LNLSWNQIGGAGAVAIADALKLNK 189

Query: 199 ASNQSHNNSNQSHNTSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
                + + NQ  +   ++    LK    L EL LS+N  G  G + +A+ ++ +    L
Sbjct: 190 TVTTIYLSGNQIGDAGARAIAEVLKVNTTLTELGLSENQIGDAGAQAIAEAIKVNKI--L 247

Query: 258 EELKLNNNGLGITGCKLLSKAL 279
             L+L  N +G  G + +++A+
Sbjct: 248 TNLELGWNQIGDAGAQAIAEAI 269



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 62/127 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +  N I   G  A++DA + NK +  + L+ N I   GA  + + 
Sbjct: 153 IAEALKVNTTLTKLNLSWNQIGGAGAVAIADALKLNKTVTTIYLSGNQIGDAGARAIAEV 212

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +  AGA +IA+ +  N  L ++ L  N+I   G   + +A++  
Sbjct: 213 LKVNTTLTELGLSENQIGDAGAQAIAEAIKVNKILTNLELGWNQIGDAGAQAIAEAIELG 272

Query: 122 TKLKQIN 128
           T L ++N
Sbjct: 273 TTLTRLN 279


>gi|387593643|gb|EIJ88667.1| hypothetical protein NEQG_01357 [Nematocida parisii ERTm3]
          Length = 302

 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 115/224 (51%), Gaps = 27/224 (12%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           ++V  D+SDNA    G+E L+ ++       L+ L +NNNG+GI G + LS+AL +  + 
Sbjct: 94  KIVYFDISDNALSLHGMEILSPMIEK--MHLLKHLVMNNNGIGIDGGEFLSQALENLSKE 151

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG----ITAL 341
           SK       L+    GRNRLE E A  L          + +++ QN I  +     +T+L
Sbjct: 152 SK------VLESLEVGRNRLE-ESATKLGKALSLFPCFDALKIYQNSINSINTGNLLTSL 204

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           S       N+R L+++DN +   G+  L QA+   P +  LN+ DC++   G   +A  L
Sbjct: 205 STL-----NMRILDISDNFLLEYGSNVLSQAMKSWP-IEYLNIADCMMSDKGVEVLASAL 258

Query: 402 TDNTTLE-------DVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
            ++  ++       +++++ N+I+ +  LD ++A+  K  ++ +
Sbjct: 259 PEHIYIQGELVSEKEIDMSYNDIT-EESLDSIRAIIKKYAIRSL 301


>gi|255552321|ref|XP_002517205.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223543840|gb|EEF45368.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 549

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 13/236 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  LDLS+NA G  GV     LLRS  C  LEEL L N+G+        ++A+ +  
Sbjct: 223 GSILKSLDLSNNALGEKGVRAFGALLRSQSC--LEELYLMNDGISEEA----ARAVCELI 276

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      L++     N   + GA  +A V K+   LE        I   G  ALS+
Sbjct: 277 PSTEK------LRILHFHNNMTGDPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSE 330

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A E   +L+ L+L DN    +  + L + L K   L  + L    L+  GA +IA  L +
Sbjct: 331 ALETCSHLKKLDLRDNVFGVEAGVALSKVLPKHAGLTEVYLSYLNLEDEGAIAIANALKE 390

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +   LE +++  N+I+ +    +   ++ K  L ++N++EN+  +EG  ++ K ++
Sbjct: 391 SAPALEVLDMAGNDITAEAAPVVSACVELKQNLIKLNLAENELKDEGAIQISKALE 446



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 3/194 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQ 60
           L+ V  K   L  V +    +   G  A+++A +E+   L  L++  N IT + A  +  
Sbjct: 356 LSKVLPKHAGLTEVYLSYLNLEDEGAIAIANALKESAPALEVLDMAGNDITAEAAPVVSA 415

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            +    +L  LNL +  LK  GA  I+K L + +  L++V+++ N I   G   L + M 
Sbjct: 416 CVELKQNLIKLNLAENELKDEGAIQISKALEEGHVQLKEVDMSTNSIGRVGARVLAQVMV 475

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFG-MAAALVLEDDEGECSDEEQDEESEEEND 178
            K + K +N++EN   +EG++E++++ K    M   L   + EG   DEE  E  + ++D
Sbjct: 476 QKPEFKLLNINENCISDEGIDEVKEIFKKCPEMLGPLDENNPEGPDDDEESGEGDDNQHD 535

Query: 179 SDAEGDNSNLSHND 192
            +++  N  ++  D
Sbjct: 536 LESKLKNLEVTGED 549



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 5/202 (2%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            +N   G+   ++    L    +  K+    + L  FIAGR   E      + +   +  
Sbjct: 169 FSNRSFGLEAARVAEPILASIKDQLKE----VDLSDFIAGRPEEEALDVMNIFSAALEGS 224

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            L+ +++  N +   G+ A          L  L L ++ I+ + A  + + +     L I
Sbjct: 225 ILKSLDLSNNALGEKGVRAFGALLRSQSCLEELYLMNDGISEEAARAVCELIPSTEKLRI 284

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+  + +    GA +IA+ L  +  LED   +   I  +GG+ L +A++  + LK++++ 
Sbjct: 285 LHFHNNMTGDPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSEALETCSHLKKLDLR 344

Query: 442 ENQFG-EEGVEEMEKLMKSFGM 462
           +N FG E GV   + L K  G+
Sbjct: 345 DNVFGVEAGVALSKVLPKHAGL 366



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K+   LE        I   G  ALS+A E    L+ L+L DN    +  + L + 
Sbjct: 300 IAEVLKRSALLEDFRCSSTRIGAEGGIALSEALETCSHLKKLDLRDNVFGVEAGVALSKV 359

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L K   L  + L    L+  GA +IA  L ++   LE +++  N+I+ +    +   ++ 
Sbjct: 360 LPKHAGLTEVYLSYLNLEDEGAIAIANALKESAPALEVLDMAGNDITAEAAPVVSACVEL 419

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++N++EN+  +EG  ++ K ++
Sbjct: 420 KQNLIKLNLAENELKDEGAIQISKALE 446



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 27/291 (9%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N +   G+ A          L  L L ++ I+ + A  + + +     L IL
Sbjct: 226 LKSLDLSNNALGEKGVRAFGALLRSQSCLEELYLMNDGISEEAARAVCELIPSTEKLRIL 285

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ L  +  LED   +   I  +GG+ L +A++  + LK++++ +
Sbjct: 286 HFHNNMTGDPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSEALETCSHLKKLDLRD 345

Query: 132 NQFG-EEGVEEMEKLMKSFGMA----AALVLEDDEGECSDEEQDEESEEE--------ND 178
           N FG E GV   + L K  G+     + L LE DEG  +     +ES           ND
Sbjct: 346 NVFGVEAGVALSKVLPKHAGLTEVYLSYLNLE-DEGAIAIANALKESAPALEVLDMAGND 404

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHN-----NSNQSHNTSNQSHMSLKTGARLVELDLS 233
             AE      +  +   +    N + N      + Q      + H+ LK      E+D+S
Sbjct: 405 ITAEAAPVVSACVELKQNLIKLNLAENELKDEGAIQISKALEEGHVQLK------EVDMS 458

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
            N+ G +G   LA ++     F L  L +N N +   G   + +    C E
Sbjct: 459 TNSIGRVGARVLAQVMVQKPEFKL--LNINENCISDEGIDEVKEIFKKCPE 507


>gi|320170054|gb|EFW46953.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 755

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 12/229 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  L+LSDN  G  G + +   LR+     L  L LN N +   G   +++ L 
Sbjct: 39  LKANGNLQYLELSDNQIGDAGAQAIGSALRNKS--TLIALSLNENKISDIGAFAVAEGLQ 96

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                     +  AL       N++ + GA+ + +V +    L R+ + QN I   G  A
Sbjct: 97  ----------ASTALTQLGMSVNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAGARA 146

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++  + +  L  L + +N I   GA  +G AL    +L++L L    +  AGA +IA+ 
Sbjct: 147 IAEGLQTSTALTDLRMFENQIGDDGAQAIGAALRTKANLSLLYLSQNKIGDAGARAIAEG 206

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           L   T L D  +  N+I   G   +  A++NKT L  + +SEN+ G+ G
Sbjct: 207 LKTLTVLTDFRMFENQIGDAGAQAIGAALRNKTNLSSLYLSENKIGDIG 255



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 147/359 (40%), Gaps = 63/359 (17%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+K K+   V   ++GI H     +++  + N  L++L L+DN I   GA  +G AL  
Sbjct: 12  LFEKAKSSSRVI--RSGITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRN 69

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
             +L  L+L +  +   GA ++A+ L  +T L  + ++ N+I   G   +   ++NK  L
Sbjct: 70  KSTLIALSLNENKISDIGAFAVAEGLQASTALTQLGMSVNQIGDAGARAIGSVLRNKANL 129

Query: 125 KQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
            ++ +S+N+ G+ G   + E L  S  +    + E+  G+                    
Sbjct: 130 ARLYLSQNKIGDAGARAIAEGLQTSTALTDLRMFENQIGD-------------------- 169

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
                   D   +  A                    +L+T A L  L LS N  G  G  
Sbjct: 170 --------DGAQAIGA--------------------ALRTKANLSLLYLSQNKIGDAGAR 201

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
            +A+ L++     L + ++  N +G  G + +  AL +     K   S L L       N
Sbjct: 202 AIAEGLKT--LTVLTDFRMFENQIGDAGAQAIGAALRN-----KTNLSSLYLS-----EN 249

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           ++ + GA  +A   +    L  + M  N I   G  A+  A     NL  LNL DN I+
Sbjct: 250 KIGDIGACAIAEGVQAASALTELGMSTNQIGDAGAQAIGAALRNKANLSKLNLWDNQIS 308



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 12/235 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L+    L +L +S N  G  G   +  +LR+    A   L L+ N +G  G + +++ L 
Sbjct: 95  LQASTALTQLGMSVNQIGDAGARAIGSVLRNKANLA--RLYLSQNKIGDAGARAIAEGLQ 152

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                +        L++F    N++ ++GA+ + A  +    L  + + QN I   G  A
Sbjct: 153 TSTALTD-------LRMF---ENQIGDDGAQAIGAALRTKANLSLLYLSQNKIGDAGARA 202

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++  +    L    + +N I   GA  +G AL    +L+ L L +  +   GA +IA+ 
Sbjct: 203 IAEGLKTLTVLTDFRMFENQIGDAGAQAIGAALRNKTNLSSLYLSENKIGDIGACAIAEG 262

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           +   + L ++ ++ N+I   G   +  A++NK  L ++N+ +NQ     V+ + K
Sbjct: 263 VQAASALTELGMSTNQIGDAGAQAIGAALRNKANLSKLNLWDNQISSSAVQLLSK 317



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           +F+K K+  RV   ++GI H     +++  + N NL++L L+DN I   GA  +G AL  
Sbjct: 12  LFEKAKSSSRVI--RSGITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRN 69

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L  L+L +  +   GA ++A+ L  +T L  + ++ N+I   G   +   ++NK  L
Sbjct: 70  KSTLIALSLNENKISDIGAFAVAEGLQASTALTQLGMSVNQIGDAGARAIGSVLRNKANL 129

Query: 436 KQINVSENQFGEEGVEEM 453
            ++ +S+N+ G+ G   +
Sbjct: 130 ARLYLSQNKIGDAGARAI 147



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 80/158 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GA+ + +  +   TL  + + +N I  +G  A+++  + +  L  L ++ N I 
Sbjct: 53  NQIGDAGAQAIGSALRNKSTLIALSLNENKISDIGAFAVAEGLQASTALTQLGMSVNQIG 112

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  +G  L    +LA L L    +  AGA +IA+ L  +T L D+ +  N+I   G 
Sbjct: 113 DAGARAIGSVLRNKANLARLYLSQNKIGDAGARAIAEGLQTSTALTDLRMFENQIGDDGA 172

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
             +  A++ K  L  + +S+N+ G+ G   + + +K+ 
Sbjct: 173 QAIGAALRTKANLSLLYLSQNKIGDAGARAIAEGLKTL 210



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 69/137 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +V +    L  + + QN I   G  A+++  + +  L  L + +N I   GA  +G A
Sbjct: 119 IGSVLRNKANLARLYLSQNKIGDAGARAIAEGLQTSTALTDLRMFENQIGDDGAQAIGAA 178

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L++L L    +  AGA +IA+ L   T L D  +  N+I   G   +  A++NK
Sbjct: 179 LRTKANLSLLYLSQNKIGDAGARAIAEGLKTLTVLTDFRMFENQIGDAGAQAIGAALRNK 238

Query: 122 TKLKQINVSENQFGEEG 138
           T L  + +SEN+ G+ G
Sbjct: 239 TNLSSLYLSENKIGDIG 255



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 73/148 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +  +   TL  + + +N I  +G  A+++  + +  L  L ++ N I   GA  +G  
Sbjct: 63  IGSALRNKSTLIALSLNENKISDIGAFAVAEGLQASTALTQLGMSVNQIGDAGARAIGSV 122

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +LA L L    +  AGA +IA+ L  +T L D+ +  N+I   G   +  A++ K
Sbjct: 123 LRNKANLARLYLSQNKIGDAGARAIAEGLQTSTALTDLRMFENQIGDDGAQAIGAALRTK 182

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSF 149
             L  + +S+N+ G+ G   + + +K+ 
Sbjct: 183 ANLSLLYLSQNKIGDAGARAIAEGLKTL 210



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 75/158 (47%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           R+ + ++ A ++A   K    L+ +E+  N I   G  A+  A      L  L+LN+N I
Sbjct: 24  RSGITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNENKI 83

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
           +  GA  + + L    +L  L +    +  AGA +I   L +   L  + L+ N+I   G
Sbjct: 84  SDIGAFAVAEGLQASTALTQLGMSVNQIGDAGARAIGSVLRNKANLARLYLSQNKIGDAG 143

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
              + + ++  T L  + + ENQ G++G + +   +++
Sbjct: 144 ARAIAEGLQTSTALTDLRMFENQIGDDGAQAIGAALRT 181


>gi|300693896|ref|YP_003749869.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299075933|emb|CBJ35242.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
           solanacearum PSI07]
          Length = 1002

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 207/483 (42%), Gaps = 98/483 (20%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++ H+++  +G     ++    A+   +KL  L+L+D  I  +GA    Q L+   SL 
Sbjct: 574 PSVRHLDL--SGCTGTAVSGAGLAYLAGRKLESLDLSDTPIGDRGA----QLLASSTSLT 627

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            LNL    +  AGA++ A    DNT+L  +NL  N IS  G     +A+   T L  ++V
Sbjct: 628 SLNLSGNEISDAGAAAFA----DNTSLTSLNLRGNHISDAG----AEALGRNTVLTSLDV 679

Query: 130 SENQFGEEGVEEM--EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
           S N  G  GV+ +   + + S  +            CS   +DE  E      A   N+ 
Sbjct: 680 SANPIGNTGVQALASSRSLTSLNL------------CSTWIEDEGVE------ALASNTV 721

Query: 188 LSHNDSNHSHN--------ASNQSHNNSNQSH-NTSNQSHMSLKTGARLVELDLSDNAFG 238
           L   D +H+          A N++  +   +H + +N     L +   L  L+LS N   
Sbjct: 722 LRSLDISHNRFGAQFAAELAQNRTLASLKANHCSLTNNVAQQLASIRSLTALELSSNLID 781

Query: 239 PIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF 298
             GV+    ++R++   +L  L L+ N +G+ G   L  AL     S         L V 
Sbjct: 782 DAGVQA---IVRNA---SLRSLDLSQNPIGLGGLHAL--ALSRTLTS---------LDVS 824

Query: 299 IAG---RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
             G   R  L          V  K ++L  +++  NGI   G+  L+     N++L  L+
Sbjct: 825 CIGCGDRGGL----------VLSKSRSLTLLKLGSNGIASEGVQILA----ANRSLISLD 870

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L+ NTI    A    +AL+K P LA LN   C L  A  S++A    ++ +L  ++++ N
Sbjct: 871 LSGNTIDVVAA----RALAKNPRLASLNASSCGLDDAAVSALA----ESRSLTSLDVSKN 922

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSF--------GMAAAL 466
            +   G     +A+     L  +N+S N+ G  G   + E    +F        G A AL
Sbjct: 923 RLFSPG----ARALAGNRVLTSLNISHNRIGFHGAAALAESTSLTFLDARANGIGEAGAL 978

Query: 467 VLE 469
           VLE
Sbjct: 979 VLE 981



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 22/125 (17%)

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
             E++ L  L+L  N I  KG     QAL+   SL  L + +CL+   G  ++A+  T  
Sbjct: 197 LAESRTLMSLDLTQNKIGDKGV----QALAASRSLTNLTVSNCLVTDIGLEALARSRTLT 252

Query: 403 ------------DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
                       D     D + T N+I+V+G     +A+     L  ++V  N  G+ GV
Sbjct: 253 SLDLGNLVSATYDEAEQADFDRTANDITVKG----TRALVQSPSLTSLSVQGNLCGDAGV 308

Query: 451 EEMEK 455
            E+ K
Sbjct: 309 LELAK 313



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 22/125 (17%)

Query: 34  FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 91
             E++ L  L+L  N I  KG     QAL+   SL  L + +CL+   G  ++A+  T  
Sbjct: 197 LAESRTLMSLDLTQNKIGDKGV----QALAASRSLTNLTVSNCLVTDIGLEALARSRTLT 252

Query: 92  ------------DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
                       D     D + T N+I+V+G     +A+     L  ++V  N  G+ GV
Sbjct: 253 SLDLGNLVSATYDEAEQADFDRTANDITVKG----TRALVQSPSLTSLSVQGNLCGDAGV 308

Query: 140 EEMEK 144
            E+ K
Sbjct: 309 LELAK 313


>gi|449278877|gb|EMC86605.1| Protein NLRC3, partial [Columba livia]
          Length = 994

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 193/424 (45%), Gaps = 37/424 (8%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
           +++ L+L +N I+ KGA  L ++L    SL +L+L    +   GA ++A  L  N  L  
Sbjct: 596 QIQKLSLAENQISNKGAKALARSLMVNRSLTVLDLRSNSIGPTGAKALADALKKNQVLLS 655

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           +NL  N I   G   L +A+    +L  +++ +N  G  G  ++ + +K           
Sbjct: 656 LNLQHNVIKEDGATFLAEALLTNHRLTTLHLQKNAIGAHGARKIAEALKQ---------- 705

Query: 159 DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDS---NHSHNASNQSHNNSNQSHNTSN 215
                CS +E          S++ GDN +++  ++   NHS  + +   N+ + +  T+ 
Sbjct: 706 ----NCSLKELTL------SSNSVGDNGSVALAEALKVNHSLQSLDLQSNSISSTGVTAL 755

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
              +    G  L+ L+L +N+    G   +A  LR++    L +L L  N L   G K +
Sbjct: 756 TLGLCANKG--LISLNLRENSISKEGGPAIARALRTNS--TLRKLDLAANLLYDEGGKAI 811

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           + A+        KE    AL       N ++ + A  LA   +   +L  +++ +N I  
Sbjct: 812 ALAM--------KENQ--ALTSLHLQWNFIQAKAATALAQALQSNSSLATLDLQENAIGD 861

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
            G+ ALS A + N  L  L+L   ++   GA  L +AL    SL IL+L    +   GA 
Sbjct: 862 EGMAALSTALKVNTTLSDLHLQVASVGATGAQALAEALMVNKSLQILDLRGNSIGVVGAK 921

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           ++A  L  N +L  +NL  N + + G + +  A+K    L  +N+  N+ G+ G + +  
Sbjct: 922 AMANALKVNRSLRRLNLQENSLGMDGAICIATALKGNHGLTYVNLQGNRIGQSGAKMISD 981

Query: 456 LMKS 459
            +++
Sbjct: 982 AIRT 985



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 180/409 (44%), Gaps = 33/409 (8%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++ + + +N I + G  AL+ +   N+ L  L+L  N+I   GA  L  AL K   L  L
Sbjct: 597 IQKLSLAENQISNKGAKALARSLMVNRSLTVLDLRSNSIGPTGAKALADALKKNQVLLSL 656

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL   ++K  GA+ +A+ L  N  L  ++L  N I   G   + +A+K    LK++ +S 
Sbjct: 657 NLQHNVIKEDGATFLAEALLTNHRLTTLHLQKNAIGAHGARKIAEALKQNCSLKELTLSS 716

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDE-----------GECSDEEQDEESEEENDSD 180
           N  G+ G   + + +K      +L L+ +            G C+++     +  EN   
Sbjct: 717 NSVGDNGSVALAEALKVNHSLQSLDLQSNSISSTGVTALTLGLCANKGLISLNLRENSIS 776

Query: 181 AEGDNSNLSHNDSNHSHN----ASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
            EG  +      +N +      A+N  ++   ++        +++K    L  L L  N 
Sbjct: 777 KEGGPAIARALRTNSTLRKLDLAANLLYDEGGKA------IALAMKENQALTSLHLQWNF 830

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
                   LA  L+S+   +L  L L  N +G  G   LS AL           S L L+
Sbjct: 831 IQAKAATALAQALQSNS--SLATLDLQENAIGDEGMAALSTAL-----KVNTTLSDLHLQ 883

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           V   G       GA+ LA      K+L+ +++  N I  VG  A+++A + N++LR LNL
Sbjct: 884 VASVGAT-----GAQALAEALMVNKSLQILDLRGNSIGVVGAKAMANALKVNRSLRRLNL 938

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
            +N++   GAI +  AL     L  +NL    +  +GA  I+  +  N+
Sbjct: 939 QENSLGMDGAICIATALKGNHGLTYVNLQGNRIGQSGAKMISDAIRTNS 987



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 76/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K   +L+ +++  N I   G+TAL+     NK L  LNL +N+I+ +G   + +A
Sbjct: 727 LAEALKVNHSLQSLDLQSNSISSTGVTALTLGLCANKGLISLNLRENSISKEGGPAIARA 786

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   G  +IA  + +N  L  ++L  N I  +    L +A+++ 
Sbjct: 787 LRTNSTLRKLDLAANLLYDEGGKAIALAMKENQALTSLHLQWNFIQAKAATALAQALQSN 846

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + L  +++ EN  G+EG+  +   +K
Sbjct: 847 SSLATLDLQENAIGDEGMAALSTALK 872



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 33/314 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+  +L+ + +  N +   G  AL++A + N  L+ L+L  N+I+  G   L   
Sbjct: 699 IAEALKQNCSLKELTLSSNSVGDNGSVALAEALKVNHSLQSLDLQSNSISSTGVTALTLG 758

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  LNL +  +   G  +IA+ L  N+TL  ++L  N +  +GG  +  AMK  
Sbjct: 759 LCANKGLISLNLRENSISKEGGPAIARALRTNSTLRKLDLAANLLYDEGGKAIALAMKEN 818

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L  +++  N    +    + + ++S    A L L++                    +A
Sbjct: 819 QALTSLHLQWNFIQAKAATALAQALQSNSSLATLDLQE--------------------NA 858

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPI 240
            GD    + + +   +   +  H        T  Q+   +L     L  LDL  N+ G +
Sbjct: 859 IGDEGMAALSTALKVNTTLSDLHLQVASVGATGAQALAEALMVNKSLQILDLRGNSIGVV 918

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G + +A+ L+ +   +L  L L  N LG+ G   ++ AL         +G+     V + 
Sbjct: 919 GAKAMANALKVN--RSLRRLNLQENSLGMDGAICIATAL---------KGNHGLTYVNLQ 967

Query: 301 GRNRLENEGAKMLA 314
           G NR+   GAKM++
Sbjct: 968 G-NRIGQSGAKMIS 980



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 53/118 (44%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   K   TL  + +    +   G  AL++A   NK L+ L+L  N+I   GA  +  A
Sbjct: 867 LSTALKVNTTLSDLHLQVASVGATGAQALAEALMVNKSLQILDLRGNSIGVVGAKAMANA 926

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L    SL  LNL +  L   GA  IA  L  N  L  VNL  N I   G   +  A++
Sbjct: 927 LKVNRSLRRLNLQENSLGMDGAICIATALKGNHGLTYVNLQGNRIGQSGAKMISDAIR 984


>gi|449016162|dbj|BAM79564.1| probable Ran GTPase activating protein [Cyanidioschyzon merolae
           strain 10D]
          Length = 489

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           ++VELDLSDNA G  GV   A L + S    LE L L NNGL     KL+  AL      
Sbjct: 134 QVVELDLSDNALGAKGVRACAALFQRS--ERLESLILCNNGLAADAIKLIVDAL----TG 187

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
           S+K      L +F    N L++EGA  L  + ++   LE        +   G  A+++A 
Sbjct: 188 SEKRVYLKKLHLF---NNLLKDEGALALVPLIERAPLLEDFRFASLRVSRGGSIAVAEAL 244

Query: 346 EE-NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL--- 401
                 LR L++ DN I   GA  L Q L +   L  L L DCLL  AGA  I + L   
Sbjct: 245 TRVAPTLRRLDMTDNVIGKDGAKALAQLLEQQTHLEELYLRDCLLTDAGARCILEALMRQ 304

Query: 402 TDNTTLEDVNLTCNE-ISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEG 449
           T+   L  ++L+ NE I    G  L K +++    L  + + EN+ G+ G
Sbjct: 305 TEQPRLRVLDLSGNELIGAATGSLLGKFLEHCAPTLTHLRLDENELGDGG 354



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 6/143 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQ 60
           L  + ++   LE        +   G  A+++A       LR L++ DN I   GA  L Q
Sbjct: 212 LVPLIERAPLLEDFRFASLRVSRGGSIAVAEALTRVAPTLRRLDMTDNVIGKDGAKALAQ 271

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNE-ISVQGGLDLVK 116
            L +   L  L L DCLL  AGA  I + L   T+   L  ++L+ NE I    G  L K
Sbjct: 272 LLEQQTHLEELYLRDCLLTDAGARCILEALMRQTEQPRLRVLDLSGNELIGAATGSLLGK 331

Query: 117 AMKN-KTKLKQINVSENQFGEEG 138
            +++    L  + + EN+ G+ G
Sbjct: 332 FLEHCAPTLTHLRLDENELGDGG 354



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 36/201 (17%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL- 62
           A+ +   TL  ++M  N I   G  AL+   E+   L  L L D  +T  GA  + +AL 
Sbjct: 243 ALTRVAPTLRRLDMTDNVIGKDGAKALAQLLEQQTHLEELYLRDCLLTDAGARCILEALM 302

Query: 63  --SKLPSLAILNL-GDCLLKSAGASSIAKYL----------------------------- 90
             ++ P L +L+L G+ L+ +A  S + K+L                             
Sbjct: 303 RQTEQPRLRVLDLSGNELIGAATGSLLGKFLEHCAPTLTHLRLDENELGDGGALAIANAL 362

Query: 91  ---TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
                   L +++L  N+I  +    LV+       +  +N++ N+ G   +E +E+L+ 
Sbjct: 363 ARDPQRFRLVELSLYLNDIGGRAAFMLVQRCVRIASMCVLNLNGNRLGCIALEHIERLVA 422

Query: 148 SFGMAAALVLEDDEGECSDEE 168
              +A++ V  D+  E  DE+
Sbjct: 423 GTPLASSFVDLDENNESEDED 443


>gi|326428524|gb|EGD74094.1| hypothetical protein PTSG_05787 [Salpingoeca sp. ATCC 50818]
          Length = 238

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 14/203 (6%)

Query: 258 EELKLNNNGLGITGCKLLSKALHD--CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           E + L N+GLG  G + +++A+ D  C            LK      N +  EGA  LA 
Sbjct: 39  ERINLGNSGLGDIGARAVAEAVKDNTC------------LKELDLWDNSIGPEGAVALAE 86

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           + K    L  +++  N I + G  AL++  + N  L+ L LN+N+I  KGA+ L + L  
Sbjct: 87  MLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKH 146

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L  LNL +  +   GA ++A+ L  NT L  ++L  N I  +G + L + +K+ T +
Sbjct: 147 NTTLTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTM 206

Query: 436 KQINVSENQFGEEGVEEMEKLMK 458
             + +  N  G+EG   + ++++
Sbjct: 207 TLLGLYNNSIGDEGAVALAEMLE 229



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 14/210 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL-HDCYESSKK 288
           ++L ++  G IG   +A+ ++ + C  L+EL L +N +G  G   L++ L H+       
Sbjct: 41  INLGNSGLGDIGARAVAEAVKDNTC--LKELDLWDNSIGPEGAVALAEMLKHNT------ 92

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
                AL       N + N+GA  LA + K    L+ + +  N I   G  AL++  + N
Sbjct: 93  -----ALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHN 147

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L  LNL +N+I  +GA+ L + L    +L  L+L    +   GA ++A+ L  NTT+ 
Sbjct: 148 TTLTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMT 207

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
            + L  N I  +G + L + +++ T L+ +
Sbjct: 208 LLGLYNNSIGDEGAVALAEMLEHNTTLETL 237



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 77/135 (57%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E + +  +G+  +G  A+++A ++N  L+ L+L DN+I  +GA+ L + L    +L  L+
Sbjct: 39  ERINLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVALAEMLKHNTALTWLD 98

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    + + GA ++A+ L  NT L+++ L  N I  +G + L + +K+ T L  +N+  N
Sbjct: 99  LEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNN 158

Query: 133 QFGEEGVEEMEKLMK 147
             G EG   + +++K
Sbjct: 159 SIGPEGAVALAEMLK 173



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K    L  +++  N I + G  AL++  + N  L+ L LN+N+I  KGA+ L + 
Sbjct: 84  LAEMLKHNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEM 143

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL +  +   GA ++A+ L  NT L  ++L  N I  +G + L + +K+ 
Sbjct: 144 LKHNTTLTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHN 203

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T +  + +  N  G+EG   + ++++
Sbjct: 204 TTMTLLGLYNNSIGDEGAVALAEMLE 229



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 75/146 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K    L+ +++  N I   G  AL++  + N  L  L+L  N+I  +GA+ L + 
Sbjct: 56  VAEAVKDNTCLKELDLWDNSIGPEGAVALAEMLKHNTALTWLDLEGNSIGNQGAVALAEM 115

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +   GA ++A+ L  NTTL  +NL  N I  +G + L + +K+ 
Sbjct: 116 LKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGPEGAVALAEMLKHN 175

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  +++  N  G EG   + +++K
Sbjct: 176 TALTWLDLQYNSIGPEGAVALAEMLK 201



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 65/126 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K    L+ + +  N I   G  AL++  + N  L  LNL +N+I  +GA+ L + 
Sbjct: 112 LAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTTLTGLNLWNNSIGPEGAVALAEM 171

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L    +   GA ++A+ L  NTT+  + L  N I  +G + L + +++ 
Sbjct: 172 LKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMTLLGLYNNSIGDEGAVALAEMLEHN 231

Query: 122 TKLKQI 127
           T L+ +
Sbjct: 232 TTLETL 237



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 11/201 (5%)

Query: 88  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           + + +NT  E +NL  + +   G   + +A+K+ T LK++++ +N  G EG   + +++K
Sbjct: 30  RAIANNTCGERINLGNSGLGDIGARAVAEAVKDNTCLKELDLWDNSIGPEGAVALAEMLK 89

Query: 148 SFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNS 207
                  L LE +           E  + N +  E   +N S  D      A    HN +
Sbjct: 90  HNTALTWLDLEGNSIGNQGAVALAEMLKHNTALKELYLNNNSIGDKGAVALAEMLKHNTT 149

Query: 208 NQSHNTSNQS---------HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALE 258
               N  N S            LK    L  LDL  N+ GP G   LA++L+ +    L 
Sbjct: 150 LTGLNLWNNSIGPEGAVALAEMLKHNTALTWLDLQYNSIGPEGAVALAEMLKHNTTMTL- 208

Query: 259 ELKLNNNGLGITGCKLLSKAL 279
            L L NN +G  G   L++ L
Sbjct: 209 -LGLYNNSIGDEGAVALAEML 228


>gi|302801736|ref|XP_002982624.1| hypothetical protein SELMODRAFT_116808 [Selaginella moellendorffii]
 gi|300149723|gb|EFJ16377.1| hypothetical protein SELMODRAFT_116808 [Selaginella moellendorffii]
          Length = 505

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G++L  L+LSDNA G  GV   A LL+S    +LEEL   NNG+     K  ++A+ D  
Sbjct: 182 GSKLRSLNLSDNALGEKGVRAFAPLLKSQE--SLEELSFMNNGI----SKEAARAICDIV 235

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +    GS L L  F    N   ++GA+ LA + +K   LE        +   G  AL+ 
Sbjct: 236 TT----GSSLKLLHF--HNNMTGDQGARSLAKLVEKAIQLENFRFSSTRVGEEGAVALAS 289

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN     G + LG+AL +   L  + L D  L+ AG++ + + L  
Sbjct: 290 AIAGGSKLKVLDLRDNMYGPGGGVALGKALRQHGGLTHVYLSDLSLEDAGSTPVLEALAS 349

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            T +++ +    NEI+      L   +    +L ++N+SEN+ G++G
Sbjct: 350 GTRSIKVLEFGNNEITQSSAKALAAFIAANKELAKLNLSENELGDKG 396



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + +K   LE+       +   G  AL+ A     KL+ L+L DN     G + LG+A
Sbjct: 259 LAKLVEKAIQLENFRFSSTRVGEEGAVALASAIAGGSKLKVLDLRDNMYGPGGGVALGKA 318

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L +   L  + L D  L+ AG++ + + L   T +++ +    NEI+      L   +  
Sbjct: 319 LRQHGGLTHVYLSDLSLEDAGSTPVLEALASGTRSIKVLEFGNNEITQSSAKALAAFIAA 378

Query: 121 KTKLKQINVSENQFGEEG 138
             +L ++N+SEN+ G++G
Sbjct: 379 NKELAKLNLSENELGDKG 396



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 27/260 (10%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N +   G+ A +   +  + L  L+  +N I+ + A  +   ++   SL +L
Sbjct: 185 LRSLNLSDNALGEKGVRAFAPLLKSQESLEELSFMNNGISKEAARAICDIVTTGSSLKLL 244

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA S+AK +     LE+   +   +  +G + L  A+   +KLK +++ +
Sbjct: 245 HFHNNMTGDQGARSLAKLVEKAIQLENFRFSSTRVGEEGAVALASAIAGGSKLKVLDLRD 304

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS----N 187
           N +G  G   + K ++  G    + L D   E      D  S    ++ A G  S     
Sbjct: 305 NMYGPGGGVALGKALRQHGGLTHVYLSDLSLE------DAGSTPVLEALASGTRSIKVLE 358

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
             +N+   S   +  +   +N+                 L +L+LS+N  G  G   ++ 
Sbjct: 359 FGNNEITQSSAKALAAFIAANK----------------ELAKLNLSENELGDKGAVMVSA 402

Query: 248 LLRSSCCFALEELKLNNNGL 267
            +++SC   LEEL L++N L
Sbjct: 403 AVKASCS-KLEELDLSSNSL 421



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 69/148 (46%)

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           L  + +  N +   G+ A +   +  ++L  L+  +N I+ + A  +   ++   SL +L
Sbjct: 185 LRSLNLSDNALGEKGVRAFAPLLKSQESLEELSFMNNGISKEAARAICDIVTTGSSLKLL 244

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
           +  + +    GA S+AK +     LE+   +   +  +G + L  A+   +KLK +++ +
Sbjct: 245 HFHNNMTGDQGARSLAKLVEKAIQLENFRFSSTRVGEEGAVALASAIAGGSKLKVLDLRD 304

Query: 443 NQFGEEGVEEMEKLMKSFGMAAALVLED 470
           N +G  G   + K ++  G    + L D
Sbjct: 305 NMYGPGGGVALGKALRQHGGLTHVYLSD 332



 Score = 38.5 bits (88), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 56/130 (43%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A + K  ++LE +    NGI      A+ D       L+ L+ ++N    +GA  L + 
Sbjct: 203 FAPLLKSQESLEELSFMNNGISKEAARAICDIVTTGSSLKLLHFHNNMTGDQGARSLAKL 262

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + K   L         +   GA ++A  +   + L+ ++L  N     GG+ L KA++  
Sbjct: 263 VEKAIQLENFRFSSTRVGEEGAVALASAIAGGSKLKVLDLRDNMYGPGGGVALGKALRQH 322

Query: 122 TKLKQINVSE 131
             L  + +S+
Sbjct: 323 GGLTHVYLSD 332


>gi|320170451|gb|EFW47350.1| serine/threonine-protein kinase PBS1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1403

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 159/369 (43%), Gaps = 43/369 (11%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +AA  K  K    + + +N   + G+ A++D+ + N  +  L L  N I   GA+ + + 
Sbjct: 9   IAAALKVNKVATVILLSENLFGNAGVQAVADSLKVNMSVTTLCLRSNPIGDTGALAIAET 68

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  + LGDC +  AGA +IAK L  NTTL  + L+ N+I   G   +  A    
Sbjct: 69  LQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGDAGMEAIALAFNVN 128

Query: 122 TKLKQINVSENQFGEEGVEEMEK------LMKSFGMAAALVLEDDEGECSDEEQDEESEE 175
             +  + +  N  G+   + + +       +   G+  A                  S  
Sbjct: 129 KTVTSLRLGGNPIGDAAAQTIAETLAVNTTLTELGLGGA-----------------NSNH 171

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSD 234
             D+ A+     L  N +  + + S       N+      Q+   +LK    L +L+LS 
Sbjct: 172 LGDAGAQAIAEGLKANKAVTALDLS------MNEIGTVGAQAIAEALKVNTTLTKLELSV 225

Query: 235 NAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLA 294
           N  G  GV+ +AD L+ +    L EL L +  +G  G K +S+AL        K  + L 
Sbjct: 226 NGIGDSGVKAIADGLKVNP--RLTELHLAHCQIGAAGAKAISEAL-----KVNKTVTQLY 278

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L     G N++ ++G + +A   K+  T+  + +  N I   G  A+++A   NK L  L
Sbjct: 279 L-----GYNQIGDDGVQAIADTLKE-HTMTELILSGNRIGDAGAQAIAEALRVNKRLTKL 332

Query: 355 NLNDNTITY 363
            L++N I Y
Sbjct: 333 FLHENQIGY 341



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 10/239 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L     L  L+LS N  G  G+E +A  L  +    +  L+L  N +G    + +++ L
Sbjct: 96  TLHVNTTLACLELSANQIGDAGMEAIA--LAFNVNKTVTSLRLGGNPIGDAAAQTIAETL 153

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                ++  E     L +  A  N L + GA+ +A   K  K +  +++  N I  VG  
Sbjct: 154 --AVNTTLTE-----LGLGGANSNHLGDAGAQAIAEGLKANKAVTALDLSMNEIGTVGAQ 206

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + N  L  L L+ N I   G   +   L   P L  L+L  C + +AGA +I++
Sbjct: 207 AIAEALKVNTTLTKLELSVNGIGDSGVKAIADGLKVNPRLTELHLAHCQIGAAGAKAISE 266

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N T+  + L  N+I   G   +   +K  T + ++ +S N+ G+ G + + + ++
Sbjct: 267 ALKVNKTVTQLYLGYNQIGDDGVQAIADTLKEHT-MTELILSGNRIGDAGAQAIAEALR 324



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 71/147 (48%)

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           + +AA  K  K    + + +N   + G+ A++D+ + N ++  L L  N I   GA+ + 
Sbjct: 7   QAIAAALKVNKVATVILLSENLFGNAGVQAVADSLKVNMSVTTLCLRSNPIGDTGALAIA 66

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
           + L    +L  + LGDC +  AGA +IAK L  NTTL  + L+ N+I   G   +  A  
Sbjct: 67  ETLQLNTTLTFIRLGDCQIGDAGAQAIAKTLHVNTTLACLELSANQIGDAGMEAIALAFN 126

Query: 431 NKTKLKQINVSENQFGEEGVEEMEKLM 457
               +  + +  N  G+   + + + +
Sbjct: 127 VNKTVTSLRLGGNPIGDAAAQTIAETL 153


>gi|340502527|gb|EGR29208.1| ran gtpase-activating protein 1, putative [Ichthyophthirius
           multifiliis]
          Length = 357

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 14/227 (6%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  + ELD+SDNA  P G + L   L  +    L+   +NN GLGI G   +S+AL    
Sbjct: 101 GKNITELDISDNAVNPFGAKALVPFLEQAT--NLKVFLINNGGLGIDGVITISQALS--- 155

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                +G+P  L+     RNR ENEGA  L+     LK L+ + + Q+ I   G+  L  
Sbjct: 156 -----KGTP-NLEKLSLTRNRAENEGAIALSKALPNLKKLKELIVFQDVIKKDGMINLLR 209

Query: 344 AFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL- 401
           +  EN   L  L++ DN I+ +  I L   L K  +L  LN+ DC ++    ++I + + 
Sbjct: 210 SLAENCPELELLDVRDNFISEEAVIELVNLLKKTKNLKALNISDCNIQEKENTAIVEAIA 269

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGE 447
                L  +    NE++      LV A+  K T+L+Q+++  N   E
Sbjct: 270 ISENKLVKLGYMYNELNDVQAKKLVDALVLKGTQLQQLDIKGNDLSE 316



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 112/233 (48%), Gaps = 4/233 (1%)

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           +E L +L +S   F  E ++ N   + +TG            E  KK  + + + +    
Sbjct: 21  IEDLKNLDQSEQDFLKEHIEKNIQHMVLTGNSYSKNFCEQLGEYFKKSQNLIKIDIHDIF 80

Query: 302 RNRLENEGAKMLAAVFKKL--KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
             RL+ E  + ++ +   L  K +  +++  N +   G  AL    E+  NL+   +N+ 
Sbjct: 81  VTRLKTEIPEAISFLGNSLIGKNITELDISDNAVNPFGAKALVPFLEQATNLKVFLINNG 140

Query: 360 TITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
            +   G I + QALSK  P+L  L+L     ++ GA +++K L +   L+++ +  + I 
Sbjct: 141 GLGIDGVITISQALSKGTPNLEKLSLTRNRAENEGAIALSKALPNLKKLKELIVFQDVIK 200

Query: 419 VQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
             G ++L++++ +N  +L+ ++V +N   EE V E+  L+K      AL + D
Sbjct: 201 KDGMINLLRSLAENCPELELLDVRDNFISEEAVIELVNLLKKTKNLKALNISD 253


>gi|302791555|ref|XP_002977544.1| hypothetical protein SELMODRAFT_31007 [Selaginella moellendorffii]
 gi|300154914|gb|EFJ21548.1| hypothetical protein SELMODRAFT_31007 [Selaginella moellendorffii]
          Length = 521

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L LS+NA G  GV     LL+S     LE+L+  NNG+        +KA+ +  
Sbjct: 205 GSDLRFLYLSNNALGEKGVRAFGSLLKSQKH--LEDLRFENNGISSDA----AKAIVELV 258

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
             SK       L+      N   + GA+ +A++ ++   LE  ++  + +   G  AL++
Sbjct: 259 SGSK-------LRTLHFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAE 311

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           A +   +L+ L+L DN    +G   LG+A    P L  L L D  L++AG  ++ + L T
Sbjct: 312 ALQACSSLKKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALET 371

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
               L  ++L  N+IS      LV+ ++ K  LK+++++EN+  ++GV
Sbjct: 372 TAPKLSVLDLGNNDISTSCAPHLVRFLEKKAALKKLSLAENELKDKGV 419



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 15/256 (5%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           + L +G++L  L   +N  G +G E +A L+R +   ALE+ KL+++ +G  G   L++A
Sbjct: 255 VELVSGSKLRTLHFHNNMSGDLGAERIASLVRQAT--ALEDFKLSSSRVGTKGAVALAEA 312

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L  C  SS K+   L L+  I G      EG   L   F+    LE + +   G+ + G+
Sbjct: 313 LQAC--SSLKK---LDLRDNIFG-----EEGGFALGKAFRTQPLLEELYLSDLGLQNAGV 362

Query: 339 TALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
            A+ +A E     L  L+L +N I+   A  L + L K  +L  L+L +  LK  G   +
Sbjct: 363 QAVLEALETTAPKLSVLDLGNNDISTSCAPHLVRFLEKKAALKKLSLAENELKDKGVILV 422

Query: 398 AKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           +  L   +  LE+++ T N++   G +   KA+  K + K + +  N    +G+  +  +
Sbjct: 423 SNALRQGHDDLEELDFTLNDVGSDGAIAAAKAVTTKPRFKLLILESNHISAKGLASVRSV 482

Query: 457 MKS-FGMAAALVLEDD 471
           + S  G +    LED+
Sbjct: 483 LASGVGTSVLAPLEDN 498



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 1/139 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A++ ++   LE  ++  + +   G  AL++A +    L+ L+L DN    +G   LG+A
Sbjct: 281 IASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRDNIFGEEGGFALGKA 340

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
               P L  L L D  L++AG  ++ + L T    L  ++L  N+IS      LV+ ++ 
Sbjct: 341 FRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVLDLGNNDISTSCAPHLVRFLEK 400

Query: 121 KTKLKQINVSENQFGEEGV 139
           K  LK+++++EN+  ++GV
Sbjct: 401 KAALKKLSLAENELKDKGV 419



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 1/148 (0%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N +   G+ A     +  K L  L   +N I+   A  + + +S    L  L
Sbjct: 208 LRFLYLSNNALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVELVSG-SKLRTL 266

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA  IA  +   T LED  L+ + +  +G + L +A++  + LK++++ +
Sbjct: 267 HFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRD 326

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLED 159
           N FGEEG   + K  ++  +   L L D
Sbjct: 327 NIFGEEGGFALGKAFRTQPLLEELYLSD 354



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 1/140 (0%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N +   G+ A     +  K+L  L   +N I+   A  + + +S    L  L+  + +  
Sbjct: 216 NALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVELVSG-SKLRTLHFHNNMSG 274

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
             GA  IA  +   T LED  L+ + +  +G + L +A++  + LK++++ +N FGEEG 
Sbjct: 275 DLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRDNIFGEEGG 334

Query: 451 EEMEKLMKSFGMAAALVLED 470
             + K  ++  +   L L D
Sbjct: 335 FALGKAFRTQPLLEELYLSD 354



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 3/162 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L   F+    LE + +   G+ + G+ A+ +A E    KL  L+L +N I+   A  L +
Sbjct: 337 LGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVLDLGNNDISTSCAPHLVR 396

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L K  +L  L+L +  LK  G   ++  L   +  LE+++ T N++   G +   KA+ 
Sbjct: 397 FLEKKAALKKLSLAENELKDKGVILVSNALRQGHDDLEELDFTLNDVGSDGAIAAAKAVT 456

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS-FGMAAALVLEDD 160
            K + K + +  N    +G+  +  ++ S  G +    LED+
Sbjct: 457 TKPRFKLLILESNHISAKGLASVRSVLASGVGTSVLAPLEDN 498



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 1/159 (0%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L+      N L  +G +   ++ K  K LE +    NGI      A+ +    +K LR L
Sbjct: 208 LRFLYLSNNALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVELVSGSK-LRTL 266

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
           + ++N     GA  +   + +  +L    L    + + GA ++A+ L   ++L+ ++L  
Sbjct: 267 HFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRD 326

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           N    +GG  L KA + +  L+++ +S+      GV+ +
Sbjct: 327 NIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAV 365


>gi|302786738|ref|XP_002975140.1| hypothetical protein SELMODRAFT_31008 [Selaginella moellendorffii]
 gi|300157299|gb|EFJ23925.1| hypothetical protein SELMODRAFT_31008 [Selaginella moellendorffii]
          Length = 521

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L LS+NA G  GV     LL+S     LE+L+  NNG+        +KA+ +  
Sbjct: 205 GSDLRFLYLSNNALGEKGVRAFGSLLKSQKH--LEDLRFENNGISSDA----AKAIVELV 258

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
             SK       L+      N   + GA+ +A++ ++   LE  ++  + +   G  AL++
Sbjct: 259 SGSK-------LRTLHFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAE 311

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-T 402
           A +   +L+ L+L DN    +G   LG+A    P L  L L D  L++AG  ++ + L T
Sbjct: 312 ALQACSSLKKLDLRDNIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALET 371

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
               L  ++L  N+IS      LV+ ++ K  LK+++++EN+  ++GV
Sbjct: 372 TAPKLSVLDLGNNDISTSCAPHLVRFLEKKAALKKLSLAENELKDKGV 419



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 15/256 (5%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           + L +G++L  L   +N  G +G E +A L+R +   ALE+ KL+++ +G  G   L++A
Sbjct: 255 VELVSGSKLRTLHFHNNMSGDLGAERIASLVRQAT--ALEDFKLSSSRVGTKGAVALAEA 312

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L  C  SS K+   L L+  I G      EG   L   F+    LE + +   G+ + G+
Sbjct: 313 LQAC--SSLKK---LDLRDNIFG-----EEGGFALGKAFRTQPLLEELYLSDLGLQNAGV 362

Query: 339 TALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
            A+ +A E     L  L+L +N I+   A  L + L K  +L  L+L +  LK  G   +
Sbjct: 363 QAVLEALETTAPKLSVLDLGNNDISTSCAPHLVRFLEKKAALKKLSLAENELKDKGVILV 422

Query: 398 AKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           +  L   +  LE+++ T N++   G +   KA+  K + K + +  N    +G+  +  +
Sbjct: 423 SNALRQGHDDLEELDFTLNDVGSDGAIAAAKAVTTKPRFKLLILESNHISAKGLASVRSV 482

Query: 457 MKS-FGMAAALVLEDD 471
           + S  G +    LED+
Sbjct: 483 LASGVGTSVLAPLEDN 498



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 1/139 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A++ ++   LE  ++  + +   G  AL++A +    L+ L+L DN    +G   LG+A
Sbjct: 281 IASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRDNIFGEEGGFALGKA 340

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
               P L  L L D  L++AG  ++ + L T    L  ++L  N+IS      LV+ ++ 
Sbjct: 341 FRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVLDLGNNDISTSCAPHLVRFLEK 400

Query: 121 KTKLKQINVSENQFGEEGV 139
           K  LK+++++EN+  ++GV
Sbjct: 401 KAALKKLSLAENELKDKGV 419



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 1/148 (0%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N +   G+ A     +  K L  L   +N I+   A  + + +S    L  L
Sbjct: 208 LRFLYLSNNALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVELVSG-SKLRTL 266

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA  IA  +   T LED  L+ + +  +G + L +A++  + LK++++ +
Sbjct: 267 HFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRD 326

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLED 159
           N FGEEG   + K  ++  +   L L D
Sbjct: 327 NIFGEEGGFALGKAFRTQPLLEELYLSD 354



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 1/140 (0%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N +   G+ A     +  K+L  L   +N I+   A  + + +S    L  L+  + +  
Sbjct: 216 NALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVELVSG-SKLRTLHFHNNMSG 274

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
             GA  IA  +   T LED  L+ + +  +G + L +A++  + LK++++ +N FGEEG 
Sbjct: 275 DLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRDNIFGEEGG 334

Query: 451 EEMEKLMKSFGMAAALVLED 470
             + K  ++  +   L L D
Sbjct: 335 FALGKAFRTQPLLEELYLSD 354



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 3/162 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L   F+    LE + +   G+ + G+ A+ +A E    KL  L+L +N I+   A  L +
Sbjct: 337 LGKAFRTQPLLEELYLSDLGLQNAGVQAVLEALETTAPKLSVLDLGNNDISTSCAPHLVR 396

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L K  +L  L+L +  LK  G   ++  L   +  LE+++ T N++   G +   KA+ 
Sbjct: 397 FLEKKAALKKLSLAENELKDKGVILVSNALRQGHDDLEELDFTLNDVGSDGAIAAAKAVT 456

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS-FGMAAALVLEDD 160
            K + K + +  N    +G+  +  ++ S  G +    LED+
Sbjct: 457 TKPRFKLLILESNHISAKGLASVRSVLASGVGTSVLAPLEDN 498



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 1/159 (0%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L+      N L  +G +   ++ K  K LE +    NGI      A+ +    +K LR L
Sbjct: 208 LRFLYLSNNALGEKGVRAFGSLLKSQKHLEDLRFENNGISSDAAKAIVELVSGSK-LRTL 266

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
           + ++N     GA  +   + +  +L    L    + + GA ++A+ L   ++L+ ++L  
Sbjct: 267 HFHNNMSGDLGAERIASLVRQATALEDFKLSSSRVGTKGAVALAEALQACSSLKKLDLRD 326

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           N    +GG  L KA + +  L+++ +S+      GV+ +
Sbjct: 327 NIFGEEGGFALGKAFRTQPLLEELYLSDLGLQNAGVQAV 365


>gi|355709913|gb|EHH31377.1| hypothetical protein EGK_12437, partial [Macaca mulatta]
          Length = 1100

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 175/430 (40%), Gaps = 77/430 (17%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 703  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 762

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 763  SLQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 822

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLE----DDEGE-------CSDEEQDEESEEENDSD 180
            N  G+ G + + + +K      +L L+     D G        C+++     S  EN   
Sbjct: 823  NSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSIS 882

Query: 181  AEG---------DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL-------- 221
             EG          NS L + D  +N  H+   Q+   + + + T    H+          
Sbjct: 883  PEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAA 942

Query: 222  -------KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
                   +    L  LDL +NA G  G            C     LK+N           
Sbjct: 943  QALGQALQLNRSLTSLDLQENAIGDDGA-----------CAVAHALKVNT---------- 981

Query: 275  LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
               AL   Y      G+P                GA++L       +TLE +++  N I 
Sbjct: 982  ---ALTALYLQVASIGAP----------------GAQVLGEALAVNRTLEILDLRGNAIG 1022

Query: 335  HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
              G  AL++A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA
Sbjct: 1023 VSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINLQGNHIGDSGA 1082

Query: 395  SSIAKYLTDN 404
              I++ +  N
Sbjct: 1083 RMISEAIKTN 1092



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 171/411 (41%), Gaps = 59/411 (14%)

Query: 39   KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            +++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA ++A  L  N TL  
Sbjct: 702  RIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTS 761

Query: 99   VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
            ++L  N +   G   + +A+ +   L  +++ +N  G  G + M   +K       L+L 
Sbjct: 762  LSLQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLS 821

Query: 159  DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
                              ++S  +G +  L+                             
Sbjct: 822  ------------------SNSIGDGGSKALAE---------------------------- 835

Query: 219  MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
             +LK    L  LDL  N+    GV  L   L ++    L  L L  N +   G + ++ A
Sbjct: 836  -ALKVNQGLESLDLQSNSISDAGVAALMGALCTN--QTLLSLSLRENSISPEGGQAIAHA 892

Query: 279  LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
            L  C  S+        LK      N L ++GA+ +A   ++ +TL  + +  N I     
Sbjct: 893  L--CTNST--------LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAA 942

Query: 339  TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             AL  A + N++L  L+L +N I   GA  +  AL    +L  L L    + + GA  + 
Sbjct: 943  QALGQALQLNRSLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLG 1002

Query: 399  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            + L  N TLE ++L  N I V G   L  A+K  + L+++N+ EN  G  G
Sbjct: 1003 EALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGG 1053



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 12/228 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           R+ ++ L++N     G + LA  L  +   +L  L L  N +G  G K L+ AL      
Sbjct: 702 RIQKISLAENQISNKGAKALARSLLVN--RSLTSLDLRGNSIGPQGAKALADAL-----K 754

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
             +  + L+L+      N + ++GA+ +A      +TL  + + +N I  +G   ++DA 
Sbjct: 755 INRTLTSLSLQ-----GNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADAL 809

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
           ++N++L+ L L+ N+I   G+  L +AL     L  L+L    +  AG +++   L  N 
Sbjct: 810 KQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQ 869

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           TL  ++L  N IS +GG  +  A+   + LK ++++ N   ++G + +
Sbjct: 870 TLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAI 917



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 682 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 741

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 742 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMG 801

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++ +S N  G+ G + + + +K
Sbjct: 802 AQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALK 838



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 953  RSLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLE 1012

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    +  +GA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 1013 ILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINL 1072

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  G+ G   + + +K+
Sbjct: 1073 QGNHIGDSGARMISEAIKT 1091



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 148/364 (40%), Gaps = 59/364 (16%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  + + +N I  +G   ++DA ++N+ L+ L L+ N+I   G+  L +AL     L 
Sbjct: 785  RTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLE 844

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +  AG +++   L  N TL  ++L  N IS +GG  +  A+   + LK +++
Sbjct: 845  SLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDL 904

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   ++G + +   ++      +L L+ +  +    +   ++ + N S    D    +
Sbjct: 905  TANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENA 964

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
              D      A   +H               +LK    L  L L   + G  G + L + L
Sbjct: 965  IGDD----GACAVAH---------------ALKVNTALTALYLQVASIGAPGAQVLGEAL 1005

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
              +    LE L L  N +G++G K L+ AL                              
Sbjct: 1006 --AVNRTLEILDLRGNAIGVSGAKALANAL------------------------------ 1033

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
                    K   +L R+ + +N +   G   ++ A   N  L+H+NL  N I   GA  +
Sbjct: 1034 --------KVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINLQGNHIGDSGARMI 1085

Query: 370  GQAL 373
             +A+
Sbjct: 1086 SEAI 1089



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  +  A
Sbjct: 917  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVAHA 976

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + + GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 977  LKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVSGAKALANALKVN 1036

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G  G
Sbjct: 1037 SSLRRLNLQENSLGMGG 1053



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 805 MADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 864

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   G  +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 865 LCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVREN 924

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 925 RTLTSLHLQWN 935



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL++A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 1009 RTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQ 1068

Query: 70   ILNLGDCLLKSAGASSIAKYLTDN 93
             +NL    +  +GA  I++ +  N
Sbjct: 1069 HINLQGNHIGDSGARMISEAIKTN 1092


>gi|345566337|gb|EGX49280.1| hypothetical protein AOL_s00078g313 [Arthrobotrys oligospora ATCC
           24927]
          Length = 414

 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 91/192 (47%), Gaps = 9/192 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  ++LSDNAFG      L   L S     L+ L LNNNGLG     L   A+
Sbjct: 88  SLLPHQHLTTINLSDNAFGKRMEPQLVAFLSSH--LPLQHLILNNNGLG----PLCGTAI 141

Query: 280 HDCYES--SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
            D   +  SKK  +   L+  + GRNRLE+   +  +  F     ++ V M QNGI   G
Sbjct: 142 ADSLTTLASKKTSAHPKLETIVCGRNRLESGSMEAWSRTFAAHTGVKIVRMVQNGIRPEG 201

Query: 338 IT-ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           I+  L++      NL  L+L DNT T KGA  L   +     +  L +G+ LL + G + 
Sbjct: 202 ISHLLTNGLVHCTNLEILDLQDNTFTLKGAKALAAVVGAWTVIKELGVGEVLLGARGTTL 261

Query: 397 IAKYLTDNTTLE 408
           +A+ L   T  E
Sbjct: 262 LAETLAKGTNKE 273



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 15  VEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           V M QNGI   GI+  L++       L  L+L DNT T KGA  L   +     +  L +
Sbjct: 190 VRMVQNGIRPEGISHLLTNGLVHCTNLEILDLQDNTFTLKGAKALAAVVGAWTVIKELGV 249

Query: 74  GDCLLKSAGASSIAKYLTDNTTLE 97
           G+ LL + G + +A+ L   T  E
Sbjct: 250 GEVLLGARGTTLLAETLAKGTNKE 273


>gi|281201664|gb|EFA75872.1| leucine-rich repeat-containing protein [Polysphondylium pallidum
           PN500]
          Length = 798

 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 104/457 (22%), Positives = 194/457 (42%), Gaps = 36/457 (7%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +  + F    T+E+    Q  +      A+  A   N  + H++  +N +  +  + + Q
Sbjct: 355 LFTSFFDNCSTMEYFRFYQRWVSPDNFEAIGHALRTNHSITHISFRNNNLDDEFVVDIIQ 414

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL +  ++ IL+     L +  A S+A  L  N +L  V+L  N I  +GG+ +  +++ 
Sbjct: 415 ALHENNTIQILDFRLNKLGNQTAISLAGALLKNRSLTCVDLFYNAIGPEGGVAIANSLRT 474

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
              L+++ +  N    +    + + +K   +  ++ L            D   +      
Sbjct: 475 NRTLRKLYLGWNHINGQTASILSESLKVNNVIESIYL------------DRIDDHSGSLL 522

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
           AE    N S  + N +     Q          T+     + K    L +L+   N  G  
Sbjct: 523 AESLAVNTSVTELNLADCQLKQF---------TAKALGSAFKVNKSLADLNFRCNQLG-- 571

Query: 241 GVEGLADLLRS-SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
               L D+ +S S    L  + L++N +     +LL+++L       K   S  +L + +
Sbjct: 572 --ADLKDISQSLSVNHTLTRINLSDNRINDESGRLLAESL-------KTNHSITSLSLSL 622

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N+L N+ A  +     +  TL+ +++  N I   G   +++A   N  L+ LNL  N
Sbjct: 623 ---NQLGNKFADEMGVALLENTTLKLLDLSNNQIEFTGAQHIANALASNSTLKLLNLCQN 679

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
           +++ K    +  +L++  SL  L L    + SAGA S+AK + DN  L  +NL+ N+I  
Sbjct: 680 SLSSKFGPLIAYSLTQNKSLTHLELAYVGIGSAGAVSLAKAVKDNIHLRKLNLSENQIGD 739

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
            G L    A+K+   L  +++S N F     E  EK+
Sbjct: 740 DGALAFADAIKSNQFLYVLDLSYNNFTYRVKEVFEKI 776



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 80/157 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NR+ +E  ++LA   K   ++  + +  N + +     +  A  EN  L+ L+L++N I 
Sbjct: 595 NRINDESGRLLAESLKTNHSITSLSLSLNQLGNKFADEMGVALLENTTLKLLDLSNNQIE 654

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
           + GA  +  AL+   +L +LNL    L S     IA  LT N +L  + L    I   G 
Sbjct: 655 FTGAQHIANALASNSTLKLLNLCQNSLSSKFGPLIAYSLTQNKSLTHLELAYVGIGSAGA 714

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L KA+K+   L+++N+SENQ G++G       +KS
Sbjct: 715 VSLAKAVKDNIHLRKLNLSENQIGDDGALAFADAIKS 751



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%)

Query: 33  AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 92
           A  EN  L+ L+L++N I + GA  +  AL+   +L +LNL    L S     IA  LT 
Sbjct: 636 ALLENTTLKLLDLSNNQIEFTGAQHIANALASNSTLKLLNLCQNSLSSKFGPLIAYSLTQ 695

Query: 93  NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           N +L  + L    I   G + L KA+K+   L+++N+SENQ G++G       +KS    
Sbjct: 696 NKSLTHLELAYVGIGSAGAVSLAKAVKDNIHLRKLNLSENQIGDDGALAFADAIKSNQFL 755

Query: 153 AALVLEDDEGECSDEEQDEESEEENDS 179
             L L  +      +E  E+ +E+N++
Sbjct: 756 YVLDLSYNNFTYRVKEVFEKIQEQNNT 782



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 30/147 (20%), Positives = 66/147 (44%)

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
           +  + F    T+E     Q  +      A+  A   N ++ H++  +N +  +  + + Q
Sbjct: 355 LFTSFFDNCSTMEYFRFYQRWVSPDNFEAIGHALRTNHSITHISFRNNNLDDEFVVDIIQ 414

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
           AL +  ++ IL+     L +  A S+A  L  N +L  V+L  N I  +GG+ +  +++ 
Sbjct: 415 ALHENNTIQILDFRLNKLGNQTAISLAGALLKNRSLTCVDLFYNAIGPEGGVAIANSLRT 474

Query: 432 KTKLKQINVSENQFGEEGVEEMEKLMK 458
              L+++ +  N    +    + + +K
Sbjct: 475 NRTLRKLYLGWNHINGQTASILSESLK 501


>gi|320165772|gb|EFW42671.1| hypothetical protein CAOG_07803 [Capsaspora owczarzaki ATCC 30864]
          Length = 664

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 12/236 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  LDL +N  G +G    A+ L+ +   AL E++L  N +G  G + ++KAL
Sbjct: 43  ALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNK--ALAEIRLWANQIGEVGAQAIAKAL 100

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      +   L     G N+L + GA+ +A   +   TL ++ + +N I  VG  
Sbjct: 101 K----------ANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVGAQ 150

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + NK L  L+L  N I   GA  + +AL    +L  L+L    +   GA +IA+
Sbjct: 151 AIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTELSLWQNQIGDVGAQAIAE 210

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            L  NTT+  + L  N I   G   +  A+K    L  + +S+N     G+  + +
Sbjct: 211 ALEVNTTVTHLELDQNHIGDVGANTIAAALKVNKTLTLLYLSQNFLTNTGINALRQ 266



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 5/176 (2%)

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           Y+  K E   L+L+     R ++ +E AK +A   K  KTL  +++  N I  VG  A +
Sbjct: 15  YDQVKNESGGLSLE-----RRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFA 69

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +A + NK L  + L  N I   GA  + +AL    +L  L LG+  L  AGA +IA+ L 
Sbjct: 70  EALKVNKALAEIRLWANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQ 129

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            NTTL  + L  N+I   G   + +A+K    L  +++ +NQ G+ G + + + +K
Sbjct: 130 VNTTLPKLYLRENQIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALK 185



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 77/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL ++++  N I  VG  A ++A + NK L  + L  N I   GA  + +A
Sbjct: 40  IAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLWANQIGEVGAQAIAKA 99

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L LG+  L  AGA +IA+ L  NTTL  + L  N+I   G   + +A+K  
Sbjct: 100 LKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVGAQAIAEALKVN 159

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L  +++ +NQ G+ G + + + +K
Sbjct: 160 KTLTTLSLYQNQIGDVGAQAIAEALK 185



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 67/119 (56%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + NK L +L+L++N I   GA+   +AL    +LA + L    +   GA +IAK
Sbjct: 39  AIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLWANQIGEVGAQAIAK 98

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            L  NTTL  + L  N++   G   + +A++  T L ++ + ENQ G+ G + + + +K
Sbjct: 99  ALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLRENQIGDVGAQAIAEALK 157



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 65/134 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + + +N I  VG  A+++A + NK L  L+L  N I   GA  + +AL    +L  
Sbjct: 133 TLPKLYLRENQIGDVGAQAIAEALKVNKTLTTLSLYQNQIGDVGAQAIAEALKVNKTLTE 192

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    +   GA +IA+ L  NTT+  + L  N I   G   +  A+K    L  + +S
Sbjct: 193 LSLWQNQIGDVGAQAIAEALEVNTTVTHLELDQNHIGDVGANTIAAALKVNKTLTLLYLS 252

Query: 131 ENQFGEEGVEEMEK 144
           +N     G+  + +
Sbjct: 253 QNFLTNTGINALRQ 266



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 23/238 (9%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L+L    I  + A  + +AL    +L  L+L +  +   GA + A+ L  N  L ++ L 
Sbjct: 25  LSLERRQIGDEEAKAIAEALKVNKTLTYLDLHNNQIGDVGALAFAEALKVNKALAEIRLW 84

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEG 162
            N+I   G   + KA+K  T L  + + ENQ G+ G + + + ++       L L ++  
Sbjct: 85  ANQIGEVGAQAIAKALKANTTLGTLYLGENQLGDAGAQAIAEALQVNTTLPKLYLREN-- 142

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SL 221
                       +  D  A+     L  N +  + +         NQ  +   Q+   +L
Sbjct: 143 ------------QIGDVGAQAIAEALKVNKTLTTLSLYQ------NQIGDVGAQAIAEAL 184

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           K    L EL L  N  G +G + +A+ L  +    +  L+L+ N +G  G   ++ AL
Sbjct: 185 KVNKTLTELSLWQNQIGDVGAQAIAEALEVNTT--VTHLELDQNHIGDVGANTIAAAL 240



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 9/112 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + + QN I  VG  A+++A E N  + HL L+ N I   GA  +  A
Sbjct: 180 IAEALKVNKTLTELSLWQNQIGDVGAQAIAEALEVNTTVTHLELDQNHIGDVGANTIAAA 239

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           L    +L +L L    L + G          N   +  N+ C   S +G LD
Sbjct: 240 LKVNKTLTLLYLSQNFLTNTGI---------NALRQTGNIICTFNSARGRLD 282


>gi|383411373|gb|AFH28900.1| protein NLRC3 [Macaca mulatta]
 gi|383411375|gb|AFH28901.1| protein NLRC3 [Macaca mulatta]
          Length = 1065

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 175/430 (40%), Gaps = 77/430 (17%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 728  SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLE----DDEGE-------CSDEEQDEESEEENDSD 180
            N  G+ G + + + +K      +L L+     D G        C+++     S  EN   
Sbjct: 788  NSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSIS 847

Query: 181  AEG---------DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL-------- 221
             EG          NS L + D  +N  H+   Q+   + + + T    H+          
Sbjct: 848  PEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAA 907

Query: 222  -------KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
                   +    L  LDL +NA G  G            C     LK+N           
Sbjct: 908  QALGQALQLNRSLTSLDLQENAIGDDGA-----------CAVAHALKVNT---------- 946

Query: 275  LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
               AL   Y      G+P                GA++L       +TLE +++  N I 
Sbjct: 947  ---ALTALYLQVASIGAP----------------GAQVLGEALAVNRTLEILDLRGNAIG 987

Query: 335  HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
              G  AL++A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA
Sbjct: 988  VSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINLQGNHIGDSGA 1047

Query: 395  SSIAKYLTDN 404
              I++ +  N
Sbjct: 1048 RMISEAIKTN 1057



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 171/411 (41%), Gaps = 59/411 (14%)

Query: 39   KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            +++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA ++A  L  N TL  
Sbjct: 667  RIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTS 726

Query: 99   VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
            ++L  N +   G   + +A+ +   L  +++ +N  G  G + M   +K       L+L 
Sbjct: 727  LSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLS 786

Query: 159  DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
                              ++S  +G +  L+                             
Sbjct: 787  ------------------SNSIGDGGSKALAE---------------------------- 800

Query: 219  MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
             +LK    L  LDL  N+    GV  L   L ++    L  L L  N +   G + ++ A
Sbjct: 801  -ALKVNQGLESLDLQSNSISDAGVAALMGALCTN--QTLLSLSLRENSISPEGGQAIAHA 857

Query: 279  LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
            L  C  S+        LK      N L ++GA+ +A   ++ +TL  + +  N I     
Sbjct: 858  L--CTNST--------LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAA 907

Query: 339  TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             AL  A + N++L  L+L +N I   GA  +  AL    +L  L L    + + GA  + 
Sbjct: 908  QALGQALQLNRSLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLG 967

Query: 399  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            + L  N TLE ++L  N I V G   L  A+K  + L+++N+ EN  G  G
Sbjct: 968  EALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGG 1018



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 18/231 (7%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLL---RSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           R+ ++ L++N     G + LA  L   RS     L  L L  N +G  G K L+ AL   
Sbjct: 667 RIQKISLAENQISNKGAKALARSLLVNRS-----LTSLDLRGNSIGPQGAKALADAL--- 718

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
                +  + L+L+      N + ++GA+ +A      +TL  + + +N I  +G   ++
Sbjct: 719 --KINRTLTSLSLQ-----GNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMA 771

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           DA ++N++L+ L L+ N+I   G+  L +AL     L  L+L    +  AG +++   L 
Sbjct: 772 DALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALC 831

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            N TL  ++L  N IS +GG  +  A+   + LK ++++ N   ++G + +
Sbjct: 832 TNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAI 882



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 647 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 706

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 707 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 766

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++ +S N  G+ G + + + +K
Sbjct: 767 AQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALK 803



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 148/364 (40%), Gaps = 59/364 (16%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  + + +N I  +G   ++DA ++N+ L+ L L+ N+I   G+  L +AL     L 
Sbjct: 750  RTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLE 809

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +  AG +++   L  N TL  ++L  N IS +GG  +  A+   + LK +++
Sbjct: 810  SLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDL 869

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   ++G + +   ++      +L L+ +  +    +   ++ + N S    D    +
Sbjct: 870  TANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENA 929

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
              D      A   +H               +LK    L  L L   + G  G + L + L
Sbjct: 930  IGDD----GACAVAH---------------ALKVNTALTALYLQVASIGAPGAQVLGEAL 970

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
              +    LE L L  N +G++G K L+ AL                              
Sbjct: 971  --AVNRTLEILDLRGNAIGVSGAKALANAL------------------------------ 998

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
                    K   +L R+ + +N +   G   ++ A   N  L+H+NL  N I   GA  +
Sbjct: 999  --------KVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINLQGNHIGDSGARMI 1050

Query: 370  GQAL 373
             +A+
Sbjct: 1051 SEAI 1054



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 918  RSLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLE 977

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    +  +GA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 978  ILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINL 1037

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  G+ G   + + +K+
Sbjct: 1038 QGNHIGDSGARMISEAIKT 1056



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  +  A
Sbjct: 882  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVAHA 941

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + + GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 942  LKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVSGAKALANALKVN 1001

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G  G
Sbjct: 1002 SSLRRLNLQENSLGMGG 1018



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 770 MADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 829

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   G  +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 830 LCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVREN 889

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 890 RTLTSLHLQWN 900



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL++A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 974  RTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQ 1033

Query: 70   ILNLGDCLLKSAGASSIAKYLTDN 93
             +NL    +  +GA  I++ +  N
Sbjct: 1034 HINLQGNHIGDSGARMISEAIKTN 1057


>gi|18676566|dbj|BAB84935.1| FLJ00180 protein [Homo sapiens]
          Length = 499

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 160/368 (43%), Gaps = 31/368 (8%)

Query: 82  GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
           GA ++A+ L  N +L  ++L  N I  QG   L  A+K    L  +++  N   ++G   
Sbjct: 116 GAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARS 175

Query: 142 MEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASN 201
           M + + S    + L L+ +       ++  ++ ++N S  E   S+ S  D      A  
Sbjct: 176 MAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAE- 234

Query: 202 QSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK 261
                             +LK    L  LDL  N+    GV  L   L ++    L  L 
Sbjct: 235 ------------------ALKVNQGLESLDLQSNSISDAGVAALMGALCTN--QTLLSLS 274

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
           L  N +   G + ++ AL  C  S+        LK      N L ++GA+ +A   ++ +
Sbjct: 275 LRENSISPEGAQAIAHAL--CANST--------LKNLDLTANLLHDQGARAIAVAVRENR 324

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           TL  + +  N I      AL  A + N++L  L+L +N I   GA  + +AL    +L  
Sbjct: 325 TLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTA 384

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  + L+++N+ 
Sbjct: 385 LYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQ 444

Query: 442 ENQFGEEG 449
           EN  G +G
Sbjct: 445 ENSLGMDG 452



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 178/430 (41%), Gaps = 77/430 (17%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 102 IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 161

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++  S 
Sbjct: 162 SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSS 221

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLED----DEGE-------CSDEEQDEESEEENDSD 180
           N  G+ G + + + +K      +L L+     D G        C+++     S  EN   
Sbjct: 222 NSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSIS 281

Query: 181 AEGD---------NSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL-------- 221
            EG          NS L + D  +N  H+   ++   + + + T    H+          
Sbjct: 282 PEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAA 341

Query: 222 -------KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
                  +    L  LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++
Sbjct: 342 QALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQV 399

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           L +AL                       NR                 TLE +++  N I 
Sbjct: 400 LGEAL---------------------AVNR-----------------TLEILDLRGNAIG 421

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
             G  AL++A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA
Sbjct: 422 VAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGA 481

Query: 395 SSIAKYLTDN 404
             I++ +  N
Sbjct: 482 RMISEAIKTN 491



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 20/268 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +   G + +++AL
Sbjct: 123 SLLVNRSLTSLDLRGNSIGPQGAKALADALKIN--RTLTSLSLQGNTVRDDGARSMAEAL 180

Query: 280 HDCYESS-----KKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLK 321
                 S     K    P+             +LK  +   N + + GAK LA   K  +
Sbjct: 181 ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQ 240

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  
Sbjct: 241 GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKN 300

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++    L  +++ 
Sbjct: 301 LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 360

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           EN  G++G   + + +K      AL L+
Sbjct: 361 ENAIGDDGACAVARALKVNTALTALYLQ 388



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 164/390 (42%), Gaps = 55/390 (14%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L+
Sbjct: 128 RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 187

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           +L+L    +   GA  +A  L  N +L+++  + N I   G   L +A+K    L+ +++
Sbjct: 188 MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 247

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG------ 183
             N   + GV     LM +               C+++     S  EN    EG      
Sbjct: 248 QSNSISDAGV---AALMGAL--------------CTNQTLLSLSLRENSISPEGAQAIAH 290

Query: 184 ---DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KT 223
               NS L + D  +N  H+   ++   + + + T    H+                 + 
Sbjct: 291 ALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQL 350

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
              L  LDL +NA G  G   +A  L+ +   AL  L L    +G +G ++L +AL    
Sbjct: 351 NRSLTSLDLQENAIGDDGACAVARALKVNT--ALTALYLQVASIGASGAQVLGEAL---- 404

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                      L++     N +   GAK LA   K   +L R+ + +N +   G   ++ 
Sbjct: 405 ------AVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIAT 458

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   N  L+H+NL  N I   GA  + +A+
Sbjct: 459 ALSGNHRLQHINLQGNHIGDSGARMISEAI 488



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 188/421 (44%), Gaps = 31/421 (7%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
           +++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA ++A  L  N TL  
Sbjct: 101 RIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTS 160

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           ++L  N +   G   + +A+ +   L  +++ +N  G  G + M   +K           
Sbjct: 161 LSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ---------- 210

Query: 159 DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
                 S +E    S    D  A+     L  N    S +  + S +++  +        
Sbjct: 211 ----NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMG---- 262

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            +L T   L+ L L +N+  P G + +A  L ++    L+ L L  N L   G + ++ A
Sbjct: 263 -ALCTNQTLLSLSLRENSISPEGAQAIAHALCANS--TLKNLDLTANLLHDQGARAIAVA 319

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           + +      +  + L L+      N ++   A+ L    +  ++L  +++ +N I   G 
Sbjct: 320 VRE-----NRTLTSLHLQW-----NFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGA 369

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A++ A + N  L  L L   +I   GA  LG+AL+   +L IL+L    +  AGA ++A
Sbjct: 370 CAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALA 429

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             L  N++L  +NL  N + + G + +  A+    +L+ IN+  N  G+ G   + + +K
Sbjct: 430 NALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIK 489

Query: 459 S 459
           +
Sbjct: 490 T 490



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 352 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 411

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 412 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 471

Query: 130 SENQFGEEGVEEMEKLMKS 148
             N  G+ G   + + +K+
Sbjct: 472 QGNHIGDSGARMISEAIKT 490



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 232 LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 291

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 292 LCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 351

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G++G   + + +K      AL L+
Sbjct: 352 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 388



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 316 IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 375

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 376 LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 435

Query: 122 TKLKQINVSENQFGEEG 138
           + L+++N+ EN  G +G
Sbjct: 436 SSLRRLNLQENSLGMDG 452



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ +    N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 204 MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 263

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 264 LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVREN 323

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 324 RTLTSLHLQWN 334



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TLE +++  N I   G  AL++A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 408 RTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQ 467

Query: 70  ILNLGDCLLKSAGASSIAKYLTDN 93
            +NL    +  +GA  I++ +  N
Sbjct: 468 HINLQGNHIGDSGARMISEAIKTN 491


>gi|444731780|gb|ELW72126.1| Protein NLRC3 [Tupaia chinensis]
          Length = 1100

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 169/381 (44%), Gaps = 27/381 (7%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I  +G  AL+DA   N+ L  L+L  N I   GA  + +AL+   +L+
Sbjct: 736  RSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQGNGIKDDGARAMAEALASNQTLS 795

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +L+L    +   GA  +A  L  N +L+++  + N I+  G   L +A+K    L+ +++
Sbjct: 796  VLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGAAALAEALKVNQGLESLDL 855

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
             EN    EG + +   +++     +L         +  + D  S + + S   G  +NL 
Sbjct: 856  RENSISPEGAQALAGALRTNSTLRSLEY------VAGGKPDRASWQLHHSWGGGLTANLL 909

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSN--QSHMSLKTG------ARLVELDLSDNAFGPIG 241
            H+    +   +   ++     H   N  Q+  ++  G        L  LDL +NA G  G
Sbjct: 910  HDQGAQAIAGAVGENHTLLSLHLQWNFLQASAAIALGQALQRNGNLTSLDLQENAIGDEG 969

Query: 242  VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
               +A  L+++   AL  L L    +G  G + L +AL               L++    
Sbjct: 970  ATAVASALKTNT--ALTALYLQVASIGAAGAQALGEAL----------AVNRTLEILDLR 1017

Query: 302  RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
             N +   GAK LA   K   +L R+ + +N +   G   ++ A   N  L+H+NL  N +
Sbjct: 1018 GNAIGVAGAKALANALKVNSSLRRLNLQENSLGLDGALCIATALSGNHRLQHINLQGNNV 1077

Query: 362  TYKGAIPLGQALSK-LPSLAI 381
               GA  + +A++   P+L +
Sbjct: 1078 AESGARMISEAITANAPTLTV 1098



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 157/379 (41%), Gaps = 38/379 (10%)

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L+L +  + + GA ++A+ L  N +L  ++L  N I   G   L  A++    L  +++ 
Sbjct: 713  LSLAENQISNKGAKALARSLLVNRSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQ 772

Query: 131  ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
             N   ++G   M + + S    + L L+ +       +   ++ ++N S  E      S 
Sbjct: 773  GNGIKDDGARAMAEALASNQTLSVLHLQKNTIGPMGAQWMADTLKQNRSLKE---LMFSS 829

Query: 191  NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
            N       A+       NQ                 L  LDL +N+  P G + LA  LR
Sbjct: 830  NGIADGGAAALAEALKVNQG----------------LESLDLRENSISPEGAQALAGALR 873

Query: 251  SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            ++    L  L+    G          K     ++     G  L         N L ++GA
Sbjct: 874  TNS--TLRSLEYVAGG----------KPDRASWQLHHSWGGGLTA-------NLLHDQGA 914

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            + +A    +  TL  + +  N +      AL  A + N NL  L+L +N I  +GA  + 
Sbjct: 915  QAIAGAVGENHTLLSLHLQWNFLQASAAIALGQALQRNGNLTSLDLQENAIGDEGATAVA 974

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             AL    +L  L L    + +AGA ++ + L  N TLE ++L  N I V G   L  A+K
Sbjct: 975  SALKTNTALTALYLQVASIGAAGAQALGEALAVNRTLEILDLRGNAIGVAGAKALANALK 1034

Query: 431  NKTKLKQINVSENQFGEEG 449
              + L+++N+ EN  G +G
Sbjct: 1035 VNSSLRRLNLQENSLGLDG 1053



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 83/157 (52%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I  +G  AL+DA   N+ L  L+L  N I 
Sbjct: 718 NQISNKGAKALARSLLVNRSLTSLDLRANSIGPLGAKALADALRINRTLTALSLQGNGIK 777

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL+   +L++L+L    +   GA  +A  L  N +L+++  + N I+  G 
Sbjct: 778 DDGARAMAEALASNQTLSVLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGA 837

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             L +A+K    L+ +++ EN    EG + +   +++
Sbjct: 838 AALAEALKVNQGLESLDLRENSISPEGAQALAGALRT 874



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 11/209 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L L  N F    +E L  +L    C   +EL L  N +   G K L+++L        + 
Sbjct: 684 LRLDANQFQDAVMELLGSVLSGKDCRT-QELSLAENQISNKGAKALARSL-----LVNRS 737

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            + L L+      N +   GAK LA   +  +TL  + +  NGI   G  A+++A   N+
Sbjct: 738 LTSLDLRA-----NSIGPLGAKALADALRINRTLTALSLQGNGIKDDGARAMAEALASNQ 792

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L  L+L  NTI   GA  +   L +  SL  L      +   GA+++A+ L  N  LE 
Sbjct: 793 TLSVLHLQKNTIGPMGAQWMADTLKQNRSLKELMFSSNGIADGGAAALAEALKVNQGLES 852

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           ++L  N IS +G   L  A++  + L+ +
Sbjct: 853 LDLRENSISPEGAQALAGALRTNSTLRSL 881



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 50/110 (45%), Gaps = 3/110 (2%)

Query: 4    AVFKKLKT---LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            AV   LKT   L  + +    I   G  AL +A   N+ L  L+L  N I   GA  L  
Sbjct: 972  AVASALKTNTALTALYLQVASIGAAGAQALGEALAVNRTLEILDLRGNAIGVAGAKALAN 1031

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
            AL    SL  LNL +  L   GA  IA  L+ N  L+ +NL  N ++  G
Sbjct: 1032 ALKVNSSLRRLNLQENSLGLDGALCIATALSGNHRLQHINLQGNNVAESG 1081


>gi|355756510|gb|EHH60118.1| hypothetical protein EGM_11416, partial [Macaca fascicularis]
          Length = 1108

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 175/430 (40%), Gaps = 77/430 (17%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 711  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 770

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 771  SLQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 830

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLE----DDEGE-------CSDEEQDEESEEENDSD 180
            N  G+ G + + + +K      +L L+     D G        C+++     S  EN   
Sbjct: 831  NSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSIS 890

Query: 181  AEG---------DNSNLSHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL-------- 221
             EG          NS L + D  +N  H+   Q+   + + + T    H+          
Sbjct: 891  PEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAA 950

Query: 222  -------KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
                   +    L  LDL +NA G  G            C     LK+N           
Sbjct: 951  QALGQALQLNRSLTSLDLQENAIGDDGA-----------CAVAHALKVNT---------- 989

Query: 275  LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
               AL   Y      G+P                GA++L       +TLE +++  N I 
Sbjct: 990  ---ALTALYLQVASIGAP----------------GAQVLGEALAVNRTLEILDLRGNAIG 1030

Query: 335  HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
              G  AL++A + N +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA
Sbjct: 1031 VSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINLQGNHIGDSGA 1090

Query: 395  SSIAKYLTDN 404
              I++ +  N
Sbjct: 1091 RMISEAIKTN 1100



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 171/411 (41%), Gaps = 59/411 (14%)

Query: 39   KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            +++ ++L +N I+ KGA  L ++L    SL  L+L    +   GA ++A  L  N TL  
Sbjct: 710  RIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTS 769

Query: 99   VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
            ++L  N +   G   + +A+ +   L  +++ +N  G  G + M   +K       L+L 
Sbjct: 770  LSLQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLS 829

Query: 159  DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
                              ++S  +G +  L+                             
Sbjct: 830  ------------------SNSIGDGGSKALAE---------------------------- 843

Query: 219  MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
             +LK    L  LDL  N+    GV  L   L ++    L  L L  N +   G + ++ A
Sbjct: 844  -ALKVNQGLESLDLQSNSISDAGVAALMGALCTN--QTLLSLSLRENSISPEGGQAIAHA 900

Query: 279  LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
            L  C  S+        LK      N L ++GA+ +A   ++ +TL  + +  N I     
Sbjct: 901  L--CTNST--------LKNLDLTANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAA 950

Query: 339  TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             AL  A + N++L  L+L +N I   GA  +  AL    +L  L L    + + GA  + 
Sbjct: 951  QALGQALQLNRSLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLG 1010

Query: 399  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            + L  N TLE ++L  N I V G   L  A+K  + L+++N+ EN  G  G
Sbjct: 1011 EALAVNRTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGG 1061



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 18/231 (7%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLL---RSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           R+ ++ L++N     G + LA  L   RS     L  L L  N +G  G K L+ AL   
Sbjct: 710 RIQKISLAENQISNKGAKALARSLLVNRS-----LTSLDLRGNSIGPQGAKALADAL--- 761

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
                +  + L+L+      N + ++GA+ +A      +TL  + + +N I  +G   ++
Sbjct: 762 --KINRTLTSLSLQ-----GNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMGAQRMA 814

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           DA ++N++L+ L L+ N+I   G+  L +AL     L  L+L    +  AG +++   L 
Sbjct: 815 DALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGALC 874

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            N TL  ++L  N IS +GG  +  A+   + LK ++++ N   ++G + +
Sbjct: 875 TNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAI 925



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 690 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 749

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N I   G
Sbjct: 750 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSVLHLQKNSIGPMG 809

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++ +S N  G+ G + + + +K
Sbjct: 810 AQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALK 846



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 961  RSLTSLDLQENAIGDDGACAVAHALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLE 1020

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    +  +GA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 1021 ILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINL 1080

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  G+ G   + + +K+
Sbjct: 1081 QGNHIGDSGARMISEAIKT 1099



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 148/364 (40%), Gaps = 59/364 (16%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TL  + + +N I  +G   ++DA ++N+ L+ L L+ N+I   G+  L +AL     L 
Sbjct: 793  RTLSVLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLE 852

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    +  AG +++   L  N TL  ++L  N IS +GG  +  A+   + LK +++
Sbjct: 853  SLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDL 912

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            + N   ++G + +   ++      +L L+ +  +    +   ++ + N S    D    +
Sbjct: 913  TANLLHDQGAQAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENA 972

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
              D      A   +H               +LK    L  L L   + G  G + L + L
Sbjct: 973  IGDD----GACAVAH---------------ALKVNTALTALYLQVASIGAPGAQVLGEAL 1013

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
              +    LE L L  N +G++G K L+ AL                              
Sbjct: 1014 --AVNRTLEILDLRGNAIGVSGAKALANAL------------------------------ 1041

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
                    K   +L R+ + +N +   G   ++ A   N  L+H+NL  N I   GA  +
Sbjct: 1042 --------KVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQHINLQGNHIGDSGARMI 1093

Query: 370  GQAL 373
             +A+
Sbjct: 1094 SEAI 1097



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  +  A
Sbjct: 925  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVAHA 984

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + + GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 985  LKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVSGAKALANALKVN 1044

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G  G
Sbjct: 1045 SSLRRLNLQENSLGMGG 1061



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 813 MADALKQNRSLKELMLSSNSIGDGGSKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 872

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   G  +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 873 LCTNQTLLSLSLRENSISPEGGQAIAHALCTNSTLKNLDLTANLLHDQGAQAIAVAVREN 932

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 933 RTLTSLHLQWN 943



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL++A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 1017 RTLEILDLRGNAIGVSGAKALANALKVNSSLRRLNLQENSLGMGGAICVATALSGNHRLQ 1076

Query: 70   ILNLGDCLLKSAGASSIAKYLTDN 93
             +NL    +  +GA  I++ +  N
Sbjct: 1077 HINLQGNHIGDSGARMISEAIKTN 1100


>gi|320164769|gb|EFW41668.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 515

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 157/350 (44%), Gaps = 64/350 (18%)

Query: 4   AVFKKLK---TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           AV K LK   T  +V++ +N I   G  A+ +A + N +L+ L+L+DN I   GA  + +
Sbjct: 35  AVAKALKFTATTTYVDLSENHISCAGALAIVEALKMNTRLKFLDLSDNRIGDAGAQAIAE 94

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL+   +L+ ++L +  + +AGA+++A+ L  N TL +++L  N I   G   L +A++ 
Sbjct: 95  ALTVNKTLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKNHIGDAGAQALGEALEV 154

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
            T L  + + +NQ G+ G + + ++++     A L L                       
Sbjct: 155 NTTLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDL----------------------- 191

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGP 239
                                    N NQ  +   Q+   +LK    L EL LSDN  G 
Sbjct: 192 -------------------------NQNQIGDAGVQAIAEALKVNTTLKELLLSDNQIGN 226

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
            G   LA+ L+ +   A+ +  L NN +G  G + L++AL        K  + L L    
Sbjct: 227 AGATALAEALKVNT--AMRKFALLNNQIGDAGAQALAEAL-----KVNKTLTELWLNF-- 277

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
              N++ + GA+ +A   +  KTL ++ +  N I  +G  A+  A   N+
Sbjct: 278 ---NQIGDVGAQAIAEALRVNKTLTQLVLFSNCIGKLGSQAIDAACAGNR 324



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 153/330 (46%), Gaps = 41/330 (12%)

Query: 50  ITYKGAIPLGQALSKLPSLAILN---LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 106
           IT+ G   L + +   P   +L+   +GD     A A ++AK L    T   V+L+ N I
Sbjct: 2   ITFHGLRGLCKKVKTAPGKVLLSRSQIGD-----AEAQAVAKALKFTATTTYVDLSENHI 56

Query: 107 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSD 166
           S  G L +V+A+K  T+LK +++S+N+ G+ G + + + +      + + L +D+   + 
Sbjct: 57  SCAGALAIVEALKMNTRLKFLDLSDNRIGDAGAQAIAEALTVNKTLSGIHLSNDQISNAG 116

Query: 167 EEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN--------------NSNQSHN 212
                E+ + N++      +NL H   NH  +A  Q+                + NQ  +
Sbjct: 117 ATALAEALKVNET-----LTNL-HLVKNHIGDAGAQALGEALEVNTTLTWLKLDQNQIGD 170

Query: 213 TSNQSHMSLKTGARLVE-LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG 271
              Q+   +    R V  LDL+ N  G  GV+ +A+ L+ +    L+EL L++N +G  G
Sbjct: 171 AGAQAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNT--TLKELLLSDNQIGNAG 228

Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
              L++AL              A++ F    N++ + GA+ LA   K  KTL  + +  N
Sbjct: 229 ATALAEALK----------VNTAMRKFALLNNQIGDAGAQALAEALKVNKTLTELWLNFN 278

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTI 361
            I  VG  A+++A   NK L  L L  N I
Sbjct: 279 QIGDVGAQAIAEALRVNKTLTQLVLFSNCI 308



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK  A    +DLS+N     G   + + L+ +    L+ L L++N +G  G + +++AL
Sbjct: 39  ALKFTATTTYVDLSENHISCAGALAIVEALKMNT--RLKFLDLSDNRIGDAGAQAIAEAL 96

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                +  K  S + L       +++ N GA  LA   K  +TL  + + +N I   G  
Sbjct: 97  -----TVNKTLSGIHLS-----NDQISNAGATALAEALKVNETLTNLHLVKNHIGDAGAQ 146

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL +A E N  L  L L+ N I   GA  + + +    ++A L+L    +  AG  +IA+
Sbjct: 147 ALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEVVQVNRTVAGLDLNQNQIGDAGVQAIAE 206

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NTTL+++ L+ N+I   G   L +A+K  T +++  +  NQ G+ G + + + +K
Sbjct: 207 ALKVNTTLKELLLSDNQIGNAGATALAEALKVNTAMRKFALLNNQIGDAGAQALAEALK 265



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK   RL  LDLSDN  G  G + +A+ L  +    L  + L+N+ +   G   L++AL
Sbjct: 67  ALKMNTRLKFLDLSDNRIGDAGAQAIAEAL--TVNKTLSGIHLSNDQISNAGATALAEAL 124

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +   L +    +N + + GA+ L    +   TL  +++ QN I   G  
Sbjct: 125 -------KVNETLTNLHLV---KNHIGDAGAQALGEALEVNTTLTWLKLDQNQIGDAGAQ 174

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++  + N+ +  L+LN N I   G   + +AL    +L  L L D  + +AGA+++A+
Sbjct: 175 AIAEVVQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTTLKELLLSDNQIGNAGATALAE 234

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NT +    L  N+I   G   L +A+K    L ++ ++ NQ G+ G + + + ++
Sbjct: 235 ALKVNTAMRKFALLNNQIGDAGAQALAEALKVNKTLTELWLNFNQIGDVGAQAIAEALR 293



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 93/163 (57%), Gaps = 1/163 (0%)

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           KV ++ R+++ +  A+ +A   K   T   V++ +N I   G  A+ +A + N  L+ L+
Sbjct: 20  KVLLS-RSQIGDAEAQAVAKALKFTATTTYVDLSENHISCAGALAIVEALKMNTRLKFLD 78

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L+DN I   GA  + +AL+   +L+ ++L +  + +AGA+++A+ L  N TL +++L  N
Sbjct: 79  LSDNRIGDAGAQAIAEALTVNKTLSGIHLSNDQISNAGATALAEALKVNETLTNLHLVKN 138

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            I   G   L +A++  T L  + + +NQ G+ G + + ++++
Sbjct: 139 HIGDAGAQALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEVVQ 181



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 77/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL ++ + +N I   G  AL +A E N  L  L L+ N I   GA  + + 
Sbjct: 120 LAEALKVNETLTNLHLVKNHIGDAGAQALGEALEVNTTLTWLKLDQNQIGDAGAQAIAEV 179

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +    ++A L+L    +  AG  +IA+ L  NTTL+++ L+ N+I   G   L +A+K  
Sbjct: 180 VQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTTLKELLLSDNQIGNAGATALAEALKVN 239

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T +++  +  NQ G+ G + + + +K
Sbjct: 240 TAMRKFALLNNQIGDAGAQALAEALK 265



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 10/147 (6%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V +  +T+  +++ QN I   G+ A+++A + N  L+ L L+DN I   GA  L +A
Sbjct: 176 IAEVVQVNRTVAGLDLNQNQIGDAGVQAIAEALKVNTTLKELLLSDNQIGNAGATALAEA 235

Query: 62  L---SKLPSLAILN--LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
           L   + +   A+LN  +GD     AGA ++A+ L  N TL ++ L  N+I   G   + +
Sbjct: 236 LKVNTAMRKFALLNNQIGD-----AGAQALAEALKVNKTLTELWLNFNQIGDVGAQAIAE 290

Query: 117 AMKNKTKLKQINVSENQFGEEGVEEME 143
           A++    L Q+ +  N  G+ G + ++
Sbjct: 291 ALRVNKTLTQLVLFSNCIGKLGSQAID 317


>gi|344169683|emb|CCA82044.1| putative leucine-rich-repeat type III effector protein (GALA1-like)
           [blood disease bacterium R229]
          Length = 590

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 180/417 (43%), Gaps = 83/417 (19%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            L  LN++ N I  +GA    + L+ +P+L  L++    +++ GA ++A    D+ TL  
Sbjct: 168 PLVRLNVSHNRIDAEGA----RLLAAMPTLTELDISHNDIRADGAQALA----DSATLTL 219

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           +N+  N I  +G     +A+   TKL  +N S N  G  GV+ +        +  +    
Sbjct: 220 LNVGNNRIGDRGA----QALAANTKLTSLNASANGIGSAGVQALAANATLAALDLS---- 271

Query: 159 DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
                C+    DEES +            L+ N +  S N          +     +   
Sbjct: 272 -----CT--PIDEESAQA-----------LARNTTLTSLNV---------RLSRLGDAGA 304

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            +L     L  L++S N  GP G + LA+        +L  L +  N +G+ G + L+ +
Sbjct: 305 RALAATTTLTSLNVSLNEIGPEGAKALAN------NTSLTSLDIGGNKVGVDGAQALATS 358

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
                         + L   +  RNR+E  GA+ LA   +    L  +++  NG+   G 
Sbjct: 359 --------------MTLTSLVIHRNRIEVAGAQALANNTR----LTSLDISDNGLGVWG- 399

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
              + AF +N+ L  L +  N I  +GA    + L++  +L  L++G+  +   GA ++A
Sbjct: 400 ---ARAFVDNETLTSLRIATNMIGDEGA----KWLARNTTLTSLDIGENRIGETGAQALA 452

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
                NT L  +N++ N I + G L L +     T L  +NVS NQ G  G +++ +
Sbjct: 453 G----NTKLTSLNISGNAIGMMGVLRLAR----NTTLAALNVSRNQIGVAGAQDLAR 501



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 56/223 (25%)

Query: 279 LHDCYESSKKEG----SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           L DC      EG    S L L       NR++ EGA++LAA    + TL  +++  N I 
Sbjct: 149 LSDCRAQITSEGIAHLSKLPLVRLNVSHNRIDAEGARLLAA----MPTLTELDISHNDIR 204

Query: 335 HVGITALSD--------------------AFEENKNLRHLNLNDNTITYKGA-------- 366
             G  AL+D                    A   N  L  LN + N I   G         
Sbjct: 205 ADGAQALADSATLTLLNVGNNRIGDRGAQALAANTKLTSLNASANGIGSAGVQALAANAT 264

Query: 367 --------IPL----GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                    P+     QAL++  +L  LN+    L  AGA ++A      TTL  +N++ 
Sbjct: 265 LAALDLSCTPIDEESAQALARNTTLTSLNVRLSRLGDAGARALAA----TTTLTSLNVSL 320

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           NEI  +G     KA+ N T L  +++  N+ G +G + +   M
Sbjct: 321 NEIGPEGA----KALANNTSLTSLDIGGNKVGVDGAQALATSM 359



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 16/133 (12%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  NG+   G    + AF +N+ L  L +  N I  +GA    + L++  +L  L
Sbjct: 385 LTSLDISDNGLGVWG----ARAFVDNETLTSLRIATNMIGDEGA----KWLARNTTLTSL 436

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           ++G+  +   GA ++A     NT L  +N++ N I + G L L +     T L  +NVS 
Sbjct: 437 DIGENRIGETGAQALAG----NTKLTSLNISGNAIGMMGVLRLAR----NTTLAALNVSR 488

Query: 132 NQFGEEGVEEMEK 144
           NQ G  G +++ +
Sbjct: 489 NQIGVAGAQDLAR 501



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 139/373 (37%), Gaps = 93/373 (24%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSD--------------------AFEENKKLRH 42
           A +   + TL  +++  N I   G  AL+D                    A   N KL  
Sbjct: 184 ARLLAAMPTLTELDISHNDIRADGAQALADSATLTLLNVGNNRIGDRGAQALAANTKLTS 243

Query: 43  LNLNDNTITYKGA----------------IPL----GQALSKLPSLAILNLGDCLLKSAG 82
           LN + N I   G                  P+     QAL++  +L  LN+    L  AG
Sbjct: 244 LNASANGIGSAGVQALAANATLAALDLSCTPIDEESAQALARNTTLTSLNVRLSRLGDAG 303

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           A ++A      TTL  +N++ NEI  +G     KA+ N T L  +++  N+ G +G + +
Sbjct: 304 ARALAA----TTTLTSLNVSLNEIGPEGA----KALANNTSLTSLDIGGNKVGVDGAQAL 355

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD------------AEGDNSNLSH 190
              M       +LV+  +  E +  +    +      D            A  DN  L+ 
Sbjct: 356 ATSMT----LTSLVIHRNRIEVAGAQALANNTRLTSLDISDNGLGVWGARAFVDNETLTS 411

Query: 191 --------NDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIG 241
                    D      A N +  + +   N   ++   +L    +L  L++S NA G +G
Sbjct: 412 LRIATNMIGDEGAKWLARNTTLTSLDIGENRIGETGAQALAGNTKLTSLNISGNAIGMMG 471

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           V      LR +    L  L ++ N +G+ G + L++                 L+  +  
Sbjct: 472 V------LRLARNTTLAALNVSRNQIGVAGAQDLARN--------------TTLRSLVVN 511

Query: 302 RNRLENEGAKMLA 314
            N + NEGA+ LA
Sbjct: 512 YNEIGNEGARALA 524


>gi|300694035|ref|YP_003750008.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299076072|emb|CBJ35382.1| putative leucine-rich-repeat type III effector protein (GALA1-like)
           [Ralstonia solanacearum PSI07]
          Length = 590

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 180/416 (43%), Gaps = 83/416 (19%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L  LN++ N I  +GA    + L+ +P+L  L++    +++ GA ++A    D+ TL  +
Sbjct: 169 LVRLNVSHNRIDAEGA----RLLAAMPTLTELDISHNDIRADGAQALA----DSATLTLL 220

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           N+  N I  +G     +A+   TKL  +N S N  G  GV+ +        +  +     
Sbjct: 221 NVGNNRIGDRGA----QALAANTKLTSLNASANGIGSAGVQALAANATLAALDLS----- 271

Query: 160 DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM 219
               C+    DEES +            L+ N +  S N          +     +    
Sbjct: 272 ----CT--SIDEESAQA-----------LARNTTLTSLNV---------RLSRLGDAGAR 305

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L     L  L++S N  GP G + LA+        +L  L +  N +G+ G + L+ ++
Sbjct: 306 ALAATTTLTSLNVSLNEIGPEGAKALAN------NTSLTSLDIGGNKVGVDGAQALATSM 359

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                          L   +  RNR+E  GA+ LA   +    L  +++  NG+   G  
Sbjct: 360 --------------TLTSLVIHRNRIEVAGAQALANNTR----LTSLDISDNGLGVWG-- 399

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
             + AF +N+ L  L +  N I  +GA    + L++  +L  L++G+  +   GA ++A 
Sbjct: 400 --ARAFVDNETLTSLRIATNMIGDEGA----KWLARNTTLTSLDIGENRIGETGAQALAG 453

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
               NT L  +N++ N I + G L L +     T L  +NVS NQ G  G +++ +
Sbjct: 454 ----NTKLTSLNISGNAIGMMGVLRLAR----NTTLAALNVSRNQIGVAGAQDLAR 501



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 89/223 (39%), Gaps = 56/223 (25%)

Query: 279 LHDCYESSKKEG----SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           L DC      EG    S L L       NR++ EGA++LAA    + TL  +++  N I 
Sbjct: 149 LSDCRAQITSEGIAHLSKLPLVRLNVSHNRIDAEGARLLAA----MPTLTELDISHNDIR 204

Query: 335 HVGITALSD--------------------AFEENKNLRHLNLNDNTITYKGAIPL----- 369
             G  AL+D                    A   N  L  LN + N I   G   L     
Sbjct: 205 ADGAQALADSATLTLLNVGNNRIGDRGAQALAANTKLTSLNASANGIGSAGVQALAANAT 264

Query: 370 ---------------GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                           QAL++  +L  LN+    L  AGA ++A      TTL  +N++ 
Sbjct: 265 LAALDLSCTSIDEESAQALARNTTLTSLNVRLSRLGDAGARALAA----TTTLTSLNVSL 320

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           NEI  +G     KA+ N T L  +++  N+ G +G + +   M
Sbjct: 321 NEIGPEGA----KALANNTSLTSLDIGGNKVGVDGAQALATSM 359



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 32/151 (21%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  NG+   G    + AF +N+ L  L +  N I  +GA    + L++  +L  L
Sbjct: 385 LTSLDISDNGLGVWG----ARAFVDNETLTSLRIATNMIGDEGA----KWLARNTTLTSL 436

Query: 72  NLGDCLLKSAGASSIAK--------------------YLTDNTTLEDVNLTCNEISVQGG 111
           ++G+  +   GA ++A                      L  NTTL  +N++ N+I V G 
Sbjct: 437 DIGENRIGETGAQALAGNTKLTSLNISGNAIGMMGVLRLARNTTLAALNVSRNQIGVAGA 496

Query: 112 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
            DL +     T L+ + V+ N+ G EG   +
Sbjct: 497 QDLAR----NTTLRSLVVNYNEIGNEGARAL 523


>gi|219109652|ref|XP_002176580.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411115|gb|EEC51043.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 692

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 160/392 (40%), Gaps = 80/392 (20%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS-KLPSLAI 70
           L+ + +P NG+       L++     + LR L+L+DN +  +G + L  AL+ +  +L  
Sbjct: 67  LQALRLPNNGLTSRSSVNLANILSTTQTLRELDLSDNQVESQGLLALLPALTHETCALRR 126

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK-AMKNKTKLKQINV 129
           L+L +  L + GA+ IA  L DN +L ++ +  N +  +  L ++  A++    L+ +++
Sbjct: 127 LDLYNNKLGATGATQIAAILRDNRSLRELRIGKNNLGRKKSLKVISTALQRNATLRTLDL 186

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           S NQ  + G   +  ++                                 D E   S L 
Sbjct: 187 SHNQIDDGGAILLAPVL---------------------------------DPEVSQSRLR 213

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
             D  +          N        N +   L+    L  L+LS N  GP G E LA LL
Sbjct: 214 RLDLTY----------NKIWPEGVRNLTGALLEGNRTLRCLNLSMNHVGPEGAESLAVLL 263

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           + S  F L+EL L+ N LG  G KLL + L +                            
Sbjct: 264 KFS--FTLQELLLSRNALGDHGVKLLCQGLDE---------------------------- 293

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           +K+L+        L+R+++  N I+  G   L+    +N  L  LNL  N I   GA  L
Sbjct: 294 SKLLSGT-----GLQRLDLDWNEIHDDGAKELATMLLDNAILESLNLASNAIGSDGAKAL 348

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
             AL    +L  LNL    ++  GA S+A+ L
Sbjct: 349 ANALHSNQALTFLNLMGNQIRDPGAFSLAENL 380



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 214/512 (41%), Gaps = 76/512 (14%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIP-LG 59
           +L A+  +   L  +++  N +   G T ++    +N+ LR L +  N +  K ++  + 
Sbjct: 113 LLPALTHETCALRRLDLYNNKLGATGATQIAAILRDNRSLRELRIGKNNLGRKKSLKVIS 172

Query: 60  QALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVK 116
            AL +  +L  L+L    +   GA  +A  L      + L  ++LT N+I  +G  +L  
Sbjct: 173 TALQRNATLRTLDLSHNQIDDGGAILLAPVLDPEVSQSRLRRLDLTYNKIWPEGVRNLTG 232

Query: 117 AM--KNKTKLKQINVSENQFGEEGVEEMEKLMK-SFGMAAALVLEDDEGECSDEEQDEES 173
           A+   N+T L+ +N+S N  G EG E +  L+K SF +   L+  +  G+   +   +  
Sbjct: 233 ALLEGNRT-LRCLNLSMNHVGPEGAESLAVLLKFSFTLQELLLSRNALGDHGVKLLCQGL 291

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
           +E       G    L   D +      N+ H++  +   T       L   A L  L+L+
Sbjct: 292 DESKLLSGTG----LQRLDLDW-----NEIHDDGAKELATM------LLDNAILESLNLA 336

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEG--- 290
            NA G  G + LA+ L S+   AL  L L  N +   G   L++ L  C  S + E    
Sbjct: 337 SNAIGSDGAKALANALHSNQ--ALTFLNLMGNQIRDPGAFSLAENL--CRPSCRVETLLW 392

Query: 291 ------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM---------------- 328
                 +PL  +  IA  +  +N     L  + ++++T + V                  
Sbjct: 393 EKNNCLTPLGEERLIAAFDFRKNR-RTWLGQILREIETCQSVNFNLLSCKLSDEEIMALA 451

Query: 329 -------PQNGIYHVG---ITALS------DAFEENK-NLRHLNLNDNTITYKGAIPLGQ 371
                  P+    ++G   +T  S      D    N  NL+ L+L    +  +GA  L +
Sbjct: 452 KHLAQYRPRVSTAYLGGHGVTVRSMKVLAKDVLANNHVNLQRLHLQHTRVGDEGAGALAE 511

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
           AL    +L  L L DC +   GA  +A  L  N +L  +NL  N I  +G  +L  A+ +
Sbjct: 512 ALLSNSNLRTLTLFDCSISPEGAKLLAHTLAQNKSLTQLNLHKNAIGNRGAQELFTALVD 571

Query: 432 K--TKLKQINVSENQFGEEGVEEMEKLMKSFG 461
                L  +N+ +N+  +  + + +    SFG
Sbjct: 572 PPHPSLVVLNLEQNEISDGALLQFQ----SFG 599



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 122/303 (40%), Gaps = 62/303 (20%)

Query: 205 NNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
           NN   S ++ N +++ L T   L ELDLSDN     G+  L   L    C AL  L L N
Sbjct: 74  NNGLTSRSSVNLANI-LSTTQTLRELDLSDNQVESQGLLALLPALTHETC-ALRRLDLYN 131

Query: 265 NGLGITGCKLLSKALHDCYESSKKE--------GSPLALKVFIAG-------------RN 303
           N LG TG   ++  L D    S +E        G   +LKV                  N
Sbjct: 132 NKLGATGATQIAAILRD--NRSLRELRIGKNNLGRKKSLKVISTALQRNATLRTLDLSHN 189

Query: 304 RLENEGAKMLAAVFKK---LKTLERVEMPQNGIYHVGITALSDAF-EENKNLRHLNLNDN 359
           ++++ GA +LA V         L R+++  N I+  G+  L+ A  E N+ LR LNL+ N
Sbjct: 190 QIDDGGAILLAPVLDPEVSQSRLRRLDLTYNKIWPEGVRNLTGALLEGNRTLRCLNLSMN 249

Query: 360 TITYKGAIPLGQAL------------------------------SKLPS---LAILNLGD 386
            +  +GA  L   L                              SKL S   L  L+L  
Sbjct: 250 HVGPEGAESLAVLLKFSFTLQELLLSRNALGDHGVKLLCQGLDESKLLSGTGLQRLDLDW 309

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
             +   GA  +A  L DN  LE +NL  N I   G   L  A+ +   L  +N+  NQ  
Sbjct: 310 NEIHDDGAKELATMLLDNAILESLNLASNAIGSDGAKALANALHSNQALTFLNLMGNQIR 369

Query: 447 EEG 449
           + G
Sbjct: 370 DPG 372



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 206/500 (41%), Gaps = 66/500 (13%)

Query: 2   LAAVFKKLKTLEHVEMPQNGI-YHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +AA+ +  ++L  + + +N +     +  +S A + N  LR L+L+ N I   GAI L  
Sbjct: 142 IAAILRDNRSLRELRIGKNNLGRKKSLKVISTALQRNATLRTLDLSHNQIDDGGAILLAP 201

Query: 61  ALSKLPS---LAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVK 116
            L    S   L  L+L    +   G  ++   L + N TL  +NL+ N +  +G   L  
Sbjct: 202 VLDPEVSQSRLRRLDLTYNKIWPEGVRNLTGALLEGNRTLRCLNLSMNHVGPEGAESLAV 261

Query: 117 AMKNKTKLKQINVSENQFGEEGVEEM------EKLMKSFGMAAALVLEDDEGECSDEEQD 170
            +K    L+++ +S N  G+ GV+ +       KL+   G+     L+ D  E  D+   
Sbjct: 262 LLKFSFTLQELLLSRNALGDHGVKLLCQGLDESKLLSGTGLQR---LDLDWNEIHDDGAK 318

Query: 171 EESEEEND----------SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN------TS 214
           E +    D          S+A G +   +  ++ HS+ A    +   NQ  +        
Sbjct: 319 ELATMLLDNAILESLNLASNAIGSDGAKALANALHSNQALTFLNLMGNQIRDPGAFSLAE 378

Query: 215 NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG-----I 269
           N    S +    L E    +N   P+G E L          A +  K     LG     I
Sbjct: 379 NLCRPSCRVETLLWE---KNNCLTPLGEERL--------IAAFDFRKNRRTWLGQILREI 427

Query: 270 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTL------ 323
             C+ ++  L  C + S +E   LA K     R R+            + +K L      
Sbjct: 428 ETCQSVNFNLLSC-KLSDEEIMALA-KHLAQYRPRVSTAYLGGHGVTVRSMKVLAKDVLA 485

Query: 324 ------ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
                 +R+ +    +   G  AL++A   N NLR L L D +I+ +GA  L   L++  
Sbjct: 486 NNHVNLQRLHLQHTRVGDEGAGALAEALLSNSNLRTLTLFDCSISPEGAKLLAHTLAQNK 545

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
           SL  LNL    + + GA  +   L D  + +L  +NL  NEIS  G L      ++  +L
Sbjct: 546 SLTQLNLHKNAIGNRGAQELFTALVDPPHPSLVVLNLEQNEIS-DGAL---LQFQSFGRL 601

Query: 436 KQINVSENQFGEEGVEEMEK 455
           +Q+N++ N F +    ++ K
Sbjct: 602 QQLNIASNNFTDRAALDLAK 621



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 20/232 (8%)

Query: 245 LADLLRSS-CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
           L D LRS      L+ L+L NNGL       L+  L           +   L+      N
Sbjct: 54  LDDFLRSHHAALHLQALRLPNNGLTSRSSVNLANIL----------STTQTLRELDLSDN 103

Query: 304 RLENEGA-KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           ++E++G   +L A+  +   L R+++  N +   G T ++    +N++LR L +  N + 
Sbjct: 104 QVESQGLLALLPALTHETCALRRLDLYNNKLGATGATQIAAILRDNRSLRELRIGKNNLG 163

Query: 363 YKGAIP-LGQALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEIS 418
            K ++  +  AL +  +L  L+L    +   GA  +A  L      + L  ++LT N+I 
Sbjct: 164 RKKSLKVISTALQRNATLRTLDLSHNQIDDGGAILLAPVLDPEVSQSRLRRLDLTYNKIW 223

Query: 419 VQGGLDLVKAM--KNKTKLKQINVSENQFGEEGVEEMEKLMK-SFGMAAALV 467
            +G  +L  A+   N+T L+ +N+S N  G EG E +  L+K SF +   L+
Sbjct: 224 PEGVRNLTGALLEGNRT-LRCLNLSMNHVGPEGAESLAVLLKFSFTLQELLL 274



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 158/383 (41%), Gaps = 67/383 (17%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGE 136
           L S  + ++A  L+   TL +++L+ N++  QG L L+ A+ ++T  L+++++  N+ G 
Sbjct: 77  LTSRSSVNLANILSTTQTLRELDLSDNQVESQGLLALLPALTHETCALRRLDLYNNKLGA 136

Query: 137 EGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHS 196
            G  +         +AA L             +D  S  E      G N           
Sbjct: 137 TGATQ---------IAAIL-------------RDNRSLRELRI---GKN----------- 160

Query: 197 HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
               N     S +  +T+ Q + +L+T      LDLS N     G   LA +L      +
Sbjct: 161 ----NLGRKKSLKVISTALQRNATLRT------LDLSHNQIDDGGAILLAPVLDPEVSQS 210

Query: 257 -LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            L  L L  N +   G + L+ AL         EG+   L+      N +  EGA+ LA 
Sbjct: 211 RLRRLDLTYNKIWPEGVRNLTGAL--------LEGNR-TLRCLNLSMNHVGPEGAESLAV 261

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-----NLRHLNLNDNTITYKGAIPLG 370
           + K   TL+ + + +N +   G+  L    +E+K      L+ L+L+ N I   GA  L 
Sbjct: 262 LLKFSFTLQELLLSRNALGDHGVKLLCQGLDESKLLSGTGLQRLDLDWNEIHDDGAKELA 321

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM- 429
             L     L  LNL    + S GA ++A  L  N  L  +NL  N+I   G   L + + 
Sbjct: 322 TMLLDNAILESLNLASNAIGSDGAKALANALHSNQALTFLNLMGNQIRDPGAFSLAENLC 381

Query: 430 ----KNKTKLKQINVSENQFGEE 448
               + +T L + N      GEE
Sbjct: 382 RPSCRVETLLWEKNNCLTPLGEE 404



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 16/175 (9%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           R+ +EGA  LA        L  + +    I   G   L+    +NK+L  LNL+ N I  
Sbjct: 500 RVGDEGAGALAEALLSNSNLRTLTLFDCSISPEGAKLLAHTLAQNKSLTQLNLHKNAIGN 559

Query: 364 KGAIPLGQAL--SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
           +GA  L  AL     PSL +LNL    +          +      L+ +N+  N  + + 
Sbjct: 560 RGAQELFTALVDPPHPSLVVLNLEQNEISDGALLQFQSF----GRLQQLNIASNNFTDRA 615

Query: 422 GLDLVKAMKNK-----TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
            LDL KA  N       +L  + VS N   ++G++ +     +  +   LVLE+D
Sbjct: 616 ALDLAKACFNSLANGTLQLSWLTVSNNFISKKGLKAL-----ALFLPDGLVLEND 665


>gi|255558382|ref|XP_002520218.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223540710|gb|EEF42273.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 607

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 186/408 (45%), Gaps = 25/408 (6%)

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           +L S +I+++  C     G   +A+ +  N TLE+V+   N I+ +G     + +++   
Sbjct: 170 ELRSFSIVDMSGCNFGDEGLFFLAESIAYNQTLEEVSFAANGITAEGVKAFDRVLQSNIV 229

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED----DEGECSDEEQDEESEEENDS 179
           LK +N+S N  G++G + +  ++        L L      DEG  +    D   +  N  
Sbjct: 230 LKTLNLSGNPIGDDGAKSLSDILADNAGIEKLQLNSTDLGDEG--AKAIADLLKKNPNLR 287

Query: 180 DAEGDNSNLSHND-----SNHSHNASNQS-HNNSNQSHNT-SNQSHMSLKTGARLVELDL 232
             E +N+ + ++       +   NA+ +S + N N      +N     ++    L EL L
Sbjct: 288 VIELNNNMIDYSGFTSLAGSFLENATLRSIYLNGNYGGALGANALSKGIEGNKALRELHL 347

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
             N+ G  GV  L   L SS    L  L + NN L   G      A H   E  KK  S 
Sbjct: 348 QGNSIGDEGVRALMSGLSSSKA-KLTHLDIGNNSLSAKG------AFH-VAEYIKKSKSL 399

Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
             + +++   N + +EGA+ +A   K+ ++L  +++  N I+  GI+ ++   ++N  + 
Sbjct: 400 FWMNMYM---NDIGDEGAEKIADALKQNRSLANIDLGGNNIHAKGISEIAQVLKDNSIIT 456

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
            L +  N I   GA  L + L    ++  L LG C + + GA  IA  L  N T+  ++L
Sbjct: 457 TLEVGYNPIGPDGAKALSEVLKFHGNVKALKLGWCQIGAKGAEDIADTLKYNNTISILDL 516

Query: 413 TCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 459
             N +  +G + L +++    + L ++++  N+  ++G   + + +K+
Sbjct: 517 RGNGLRDEGAICLARSLTVVNEVLTELDLGFNEIRDDGAFAIAQALKA 564



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 47/282 (16%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS++ LKT      L+LS N  G  G + L+D+L  +    +E+L+LN+  LG  G K +
Sbjct: 225 QSNIVLKT------LNLSGNPIGDDGAKSLSDILADNA--GIEKLQLNSTDLGDEGAKAI 276

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           +  L       KK  +   L+V     N ++  G   LA  F +  TL  + +  N    
Sbjct: 277 ADLL-------KKNPN---LRVIELNNNMIDYSGFTSLAGSFLENATLRSIYLNGNYGGA 326

Query: 336 VGITALSDAFEENKNLR-----------------------------HLNLNDNTITYKGA 366
           +G  ALS   E NK LR                             HL++ +N+++ KGA
Sbjct: 327 LGANALSKGIEGNKALRELHLQGNSIGDEGVRALMSGLSSSKAKLTHLDIGNNSLSAKGA 386

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + + + K  SL  +N+    +   GA  IA  L  N +L +++L  N I  +G  ++ 
Sbjct: 387 FHVAEYIKKSKSLFWMNMYMNDIGDEGAEKIADALKQNRSLANIDLGGNNIHAKGISEIA 446

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
           + +K+ + +  + V  N  G +G + + +++K  G   AL L
Sbjct: 447 QVLKDNSIITTLEVGYNPIGPDGAKALSEVLKFHGNVKALKL 488



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 177/449 (39%), Gaps = 64/449 (14%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TLE V    NGI   G+ A     + N  L+ LNL+ N I   GA  L   L+    + 
Sbjct: 200 QTLEEVSFAANGITAEGVKAFDRVLQSNIVLKTLNLSGNPIGDDGAKSLSDILADNAGIE 259

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L    L   GA +IA  L  N  L  + L  N I   G   L  +      L+ I +
Sbjct: 260 KLQLNSTDLGDEGAKAIADLLKKNPNLRVIELNNNMIDYSGFTSLAGSFLENATLRSIYL 319

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N  G  G   + K +              EG  +  E   +     D       S LS
Sbjct: 320 NGNYGGALGANALSKGI--------------EGNKALRELHLQGNSIGDEGVRALMSGLS 365

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
            + +  +H                                LD+ +N+    G   +A+ +
Sbjct: 366 SSKAKLTH--------------------------------LDIGNNSLSAKGAFHVAEYI 393

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           + S       + +N+  +G  G + ++ AL        K+   LA  + + G N +  +G
Sbjct: 394 KKSKSLFWMNMYMND--IGDEGAEKIADAL--------KQNRSLA-NIDLGG-NNIHAKG 441

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
              +A V K    +  +E+  N I   G  ALS+  + + N++ L L    I  KGA  +
Sbjct: 442 ISEIAQVLKDNSIITTLEVGYNPIGPDGAKALSEVLKFHGNVKALKLGWCQIGAKGAEDI 501

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKA 428
              L    +++IL+L    L+  GA  +A+ LT  N  L +++L  NEI   G   + +A
Sbjct: 502 ADTLKYNNTISILDLRGNGLRDEGAICLARSLTVVNEVLTELDLGFNEIRDDGAFAIAQA 561

Query: 429 MK--NKTKLKQINVSEN---QFGEEGVEE 452
           +K     K+  +N++ N   +FG+  + +
Sbjct: 562 LKANEDVKITSLNLANNFLTKFGQSALSD 590



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 158/379 (41%), Gaps = 71/379 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + KK   L  +E+  N I + G T+L+ +F EN  LR + LN N   Y GA+     
Sbjct: 276 IADLLKKNPNLRVIELNNNMIDYSGFTSLAGSFLENATLRSIYLNGN---YGGAL----- 327

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN 120
                               GA++++K +  N  L +++L  N I  +G   L+  +  +
Sbjct: 328 --------------------GANALSKGIEGNKALRELHLQGNSIGDEGVRALMSGLSSS 367

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS----FGMAAALVLEDDEGECSDEEQDEESEEE 176
           K KL  +++  N    +G   + + +K     F M   +    DEG             E
Sbjct: 368 KAKLTHLDIGNNSLSAKGAFHVAEYIKKSKSLFWMNMYMNDIGDEG------------AE 415

Query: 177 NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
             +DA   N +L++ D             N+  +   S  + + LK  + +  L++  N 
Sbjct: 416 KIADALKQNRSLANIDLG----------GNNIHAKGISEIAQV-LKDNSIITTLEVGYNP 464

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
            GP G + L+++L+            N   L +  C++ +K   D  ++ K   +   + 
Sbjct: 465 IGPDGAKALSEVLK---------FHGNVKALKLGWCQIGAKGAEDIADTLKYNNT---IS 512

Query: 297 VFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNLR--H 353
           +     N L +EGA  LA     + + L  +++  N I   G  A++ A + N++++   
Sbjct: 513 ILDLRGNGLRDEGAICLARSLTVVNEVLTELDLGFNEIRDDGAFAIAQALKANEDVKITS 572

Query: 354 LNLNDNTITYKGAIPLGQA 372
           LNL +N +T  G   L  A
Sbjct: 573 LNLANNFLTKFGQSALSDA 591



 Score = 41.6 bits (96), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 7/163 (4%)

Query: 298 FIAGRN-------RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
           F AG N       +++ E  + L    K+L++   V+M        G+  L+++   N+ 
Sbjct: 142 FAAGSNLFPGLTAKIDRESKQKLNEFAKELRSFSIVDMSGCNFGDEGLFFLAESIAYNQT 201

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           L  ++   N IT +G     + L     L  LNL    +   GA S++  L DN  +E +
Sbjct: 202 LEEVSFAANGITAEGVKAFDRVLQSNIVLKTLNLSGNPIGDDGAKSLSDILADNAGIEKL 261

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            L   ++  +G   +   +K    L+ I ++ N     G   +
Sbjct: 262 QLNSTDLGDEGAKAIADLLKKNPNLRVIELNNNMIDYSGFTSL 304


>gi|291237294|ref|XP_002738572.1| PREDICTED: leucine rich repeat containing 45-like [Saccoglossus
           kowalevskii]
          Length = 643

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 12/221 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDL+DN   P G   +A +L+ +C     +L ++ N +G  G   +S  L   Y      
Sbjct: 285 LDLADNHLEPEGAVAIATMLKENCFIV--KLDISENTVGAIGAGAISSMLEINY------ 336

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
                LK  I     L++  A++L++  K   TL  +++  N +  +    L+    EN 
Sbjct: 337 ----TLKTLILRSTHLKDSDAQLLSSALKNNSTLLELDLCHNDLGDLAGMYLASGLAENN 392

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
           +L  LNL+ N I  KG++ L  AL     L IL+L    +   G  ++ + L  NTTL  
Sbjct: 393 SLAKLNLSWNAIRGKGSVALFNALKANSILEILDLSWNGISLPGCQALGRALKVNTTLRI 452

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           ++++ N I+ +    LV  +K    L+   V  N  GEEG+
Sbjct: 453 LDMSNNHITPEAAKKLVIGLKKNIGLEAFLVGMNPLGEEGI 493



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 67/139 (48%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L++  K   TL  +++  N +  +    L+    EN  L  LNL+ N I  KG++ L  
Sbjct: 355 LLSSALKNNSTLLELDLCHNDLGDLAGMYLASGLAENNSLAKLNLSWNAIRGKGSVALFN 414

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL     L IL+L    +   G  ++ + L  NTTL  ++++ N I+ +    LV  +K 
Sbjct: 415 ALKANSILEILDLSWNGISLPGCQALGRALKVNTTLRILDMSNNHITPEAAKKLVIGLKK 474

Query: 121 KTKLKQINVSENQFGEEGV 139
              L+   V  N  GEEG+
Sbjct: 475 NIGLEAFLVGMNPLGEEGI 493



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA-------------- 340
           ++V     N LE EGA  +A + K+   + ++++ +N +  +G  A              
Sbjct: 282 IEVLDLADNHLEPEGAVAIATMLKENCFIVKLDISENTVGAIGAGAISSMLEINYTLKTL 341

Query: 341 --------------LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
                         LS A + N  L  L+L  N +     + L   L++  SLA LNL  
Sbjct: 342 ILRSTHLKDSDAQLLSSALKNNSTLLELDLCHNDLGDLAGMYLASGLAENNSLAKLNLSW 401

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
             ++  G+ ++   L  N+ LE ++L+ N IS+ G   L +A+K  T L+ +++S N   
Sbjct: 402 NAIRGKGSVALFNALKANSILEILDLSWNGISLPGCQALGRALKVNTTLRILDMSNNHIT 461

Query: 447 EEGVEEME-KLMKSFGMAAALV 467
            E  +++   L K+ G+ A LV
Sbjct: 462 PEAAKKLVIGLKKNIGLEAFLV 483



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 1/128 (0%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           LS A + N  L  L+L  N +     + L   L++  SLA LNL    ++  G+ ++   
Sbjct: 356 LSSALKNNSTLLELDLCHNDLGDLAGMYLASGLAENNSLAKLNLSWNAIRGKGSVALFNA 415

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME-KLMKS 148
           L  N+ LE ++L+ N IS+ G   L +A+K  T L+ +++S N    E  +++   L K+
Sbjct: 416 LKANSILEILDLSWNGISLPGCQALGRALKVNTTLRILDMSNNHITPEAAKKLVIGLKKN 475

Query: 149 FGMAAALV 156
            G+ A LV
Sbjct: 476 IGLEAFLV 483



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 37/268 (13%)

Query: 92  DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
           DNT +E ++L  N +  +G + +   +K    + ++++SEN  G  G   +  +++    
Sbjct: 278 DNTFIEVLDLADNHLEPEGAVAIATMLKENCFIVKLDISENTVGAIGAGAISSMLEINYT 337

Query: 152 AAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNH---SHNASNQSHNNSN 208
              L+L     + SD +    + + N +  E D   L HND       + AS  + NNS 
Sbjct: 338 LKTLILRSTHLKDSDAQLLSSALKNNSTLLELD---LCHNDLGDLAGMYLASGLAENNS- 393

Query: 209 QSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
                             L +L+LS NA    G   L + L+++    LE L L+ NG+ 
Sbjct: 394 ------------------LAKLNLSWNAIRGKGSVALFNALKANSI--LEILDLSWNGIS 433

Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
           + GC+ L +AL               L++     N +  E AK L    KK   LE   +
Sbjct: 434 LPGCQALGRALK----------VNTTLRILDMSNNHITPEAAKKLVIGLKKNIGLEAFLV 483

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNL 356
             N +   GI  L     ++  LR  +L
Sbjct: 484 GMNPLGEEGIMTLLVPLYKHSTLRIFSL 511


>gi|302798765|ref|XP_002981142.1| hypothetical protein SELMODRAFT_114118 [Selaginella moellendorffii]
 gi|300151196|gb|EFJ17843.1| hypothetical protein SELMODRAFT_114118 [Selaginella moellendorffii]
          Length = 507

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G++L  L+LSDNA G  GV   A LL+S    +LEEL   NNG+     K  ++A+ +  
Sbjct: 184 GSKLRSLNLSDNALGEKGVRAFAPLLKSQE--SLEELSFMNNGI----SKEAARAICEIV 237

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +    GS L L  F    N   ++GA+ LA + +K   LE        +   G  AL+ 
Sbjct: 238 TT----GSSLKLLHF--HNNMTGDQGARSLAKLVEKAVQLENFRFSSTRVGEEGAVALAS 291

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN     G + LG+AL +   L  + L D  L+ AG++ I + L  
Sbjct: 292 AIAGGSKLKVLDLRDNMYGPGGGVALGKALRQHGGLTHVYLSDLSLEDAGSTPILEALAS 351

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            T +++ +    NEI+      L   +    +L ++N+SEN+ G++G
Sbjct: 352 GTRSIKVLEFGNNEITHSSAKALAAFIAANKELAKLNLSENELGDKG 398



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 27/260 (10%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N +   G+ A +   +  + L  L+  +N I+ + A  + + ++   SL +L
Sbjct: 187 LRSLNLSDNALGEKGVRAFAPLLKSQESLEELSFMNNGISKEAARAICEIVTTGSSLKLL 246

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA S+AK +     LE+   +   +  +G + L  A+   +KLK +++ +
Sbjct: 247 HFHNNMTGDQGARSLAKLVEKAVQLENFRFSSTRVGEEGAVALASAIAGGSKLKVLDLRD 306

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS----N 187
           N +G  G   + K ++  G    + L D   E      D  S    ++ A G  S     
Sbjct: 307 NMYGPGGGVALGKALRQHGGLTHVYLSDLSLE------DAGSTPILEALASGTRSIKVLE 360

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
             +N+  HS   +  +   +N+                 L +L+LS+N  G  G   ++ 
Sbjct: 361 FGNNEITHSSAKALAAFIAANK----------------ELAKLNLSENELGDKGAVMVSA 404

Query: 248 LLRSSCCFALEELKLNNNGL 267
            +++SC   LEEL L++N L
Sbjct: 405 AVKASCS-KLEELDLSSNSL 423



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + +K   LE+       +   G  AL+ A     KL+ L+L DN     G + LG+A
Sbjct: 261 LAKLVEKAVQLENFRFSSTRVGEEGAVALASAIAGGSKLKVLDLRDNMYGPGGGVALGKA 320

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L +   L  + L D  L+ AG++ I + L   T +++ +    NEI+      L   +  
Sbjct: 321 LRQHGGLTHVYLSDLSLEDAGSTPILEALASGTRSIKVLEFGNNEITHSSAKALAAFIAA 380

Query: 121 KTKLKQINVSENQFGEEG 138
             +L ++N+SEN+ G++G
Sbjct: 381 NKELAKLNLSENELGDKG 398



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 2/174 (1%)

Query: 298 FIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
            +AGR   E  E  + LA   +  K L  + +  N +   G+ A +   +  ++L  L+ 
Sbjct: 162 IVAGRPEDEALEVMRTLALALEGSK-LRSLNLSDNALGEKGVRAFAPLLKSQESLEELSF 220

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
            +N I+ + A  + + ++   SL +L+  + +    GA S+AK +     LE+   +   
Sbjct: 221 MNNGISKEAARAICEIVTTGSSLKLLHFHNNMTGDQGARSLAKLVEKAVQLENFRFSSTR 280

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           +  +G + L  A+   +KLK +++ +N +G  G   + K ++  G    + L D
Sbjct: 281 VGEEGAVALASAIAGGSKLKVLDLRDNMYGPGGGVALGKALRQHGGLTHVYLSD 334


>gi|320169274|gb|EFW46173.1| hypothetical protein CAOG_04141 [Capsaspora owczarzaki ATCC 30864]
          Length = 1055

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 114/498 (22%), Positives = 202/498 (40%), Gaps = 90/498 (18%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            G  A++DA  +NK L  L      I   G   +G+AL++  +L  LNL    +   GA+S
Sbjct: 539  GAQAIADALRQNKTLTTLQ-----IGTAGLQAIGRALAQNNTLTTLNLSRNPIDDVGANS 593

Query: 86   IAKYLTDNTTLEDVNLTC-------------------------------NEISVQGGLDL 114
            IA+ L  NT+L  ++  C                               N I   G   +
Sbjct: 594  IAEMLKSNTSLTTLDQLCFKVHEIAEALKQNTALTTLDLSSNARGFIAFNPIGAVGAQAI 653

Query: 115  VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESE 174
             +A+K    L  + ++ N  G  GV+ + + +K       L LED    CS  +    +E
Sbjct: 654  AEALKQNKTLTTLRLNNNAIGTAGVKPIAEALKVNTALTTLELED----CSIGD----AE 705

Query: 175  EENDSDAEGDNSNLSH---------NDSNHS------HNASNQSHNNSNQSHNTSNQ--- 216
             +  + A   N+ L+              HS       NA   +   + +  ++  Q   
Sbjct: 706  TQAIAPALVQNTTLTSLKLGNGVLGKAGAHSIATVLKQNAKLTTLEVTARFVDSGVQMIA 765

Query: 217  ---SHMSLKTGARLVELDLSDNAFG-----PIGVEGLADLLRSSCCFALEE-------LK 261
                H +  T  +L ++   D  F      P+  E L   +R+   F LE+       L 
Sbjct: 766  AALKHNTTLTTFKLRDMKRYDPEFEREMSEPLTTERLLPQVRNPHGFGLEKALSRVSRLF 825

Query: 262  LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            L  N +   G +++ + L            P  L+++      L++ GA++LA   K+  
Sbjct: 826  LRENIVDSAGVQVIQEVLSLI--------KPSKLEIYFG----LDDFGAQVLATSLKQNS 873

Query: 322  TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
             +  + +  + +  +G  A+++A  +N  L  LNL+   +   GA  + +AL    +L  
Sbjct: 874  WMTELNLRSSQVGPIGAQAIAEALTQNTKLIILNLSSTQLGDAGAEAISKALRVNTTLTT 933

Query: 382  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
            LNL +C + S GA ++A+ L  N  L   +L+ N I   G   +   +   T L  +++ 
Sbjct: 934  LNLRECWIGSTGAMALAEELKHNVGLTSFDLSRNSIRDSGANAMAAVISQNTTLTTLDLG 993

Query: 442  ENQFGEEGVEEM-EKLMK 458
            +N  G+ G E + E L++
Sbjct: 994  KNHIGDAGAERLAEALLR 1011



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 209/524 (39%), Gaps = 87/524 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +AA+ K+  TL  + +    I  +G  A+ +A + N  L  L L DN I   G   +G+A
Sbjct: 323 IAAILKQNSTLTTLVLDNTKIGDLGAHAIGEALKSNTTLTALRLIDNDIGSAGTQAIGEA 382

Query: 62  LSKLPSLAILNLGD---------------------------CLLKSAGASSIAKYLTDNT 94
           L    +L  L L                             C +  AG  +I   L  NT
Sbjct: 383 LKTNLALTTLVLSTEIGEAGARAIAEALVCNKTLTTLSQYWCSIGDAGVEAIVHALEKNT 442

Query: 95  TLEDVNLTCNEISVQGGLD--LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           TL  +NL  N I++  G    + + ++  T L ++++  N     G + + + +      
Sbjct: 443 TLTSLNLK-NNITLGSGAQAAIPRMLQVNTTLTELDLGANNLNSVGFQAIAEALAKNTSL 501

Query: 153 AALVLEDDEGECSDEEQDEESEEENDS----DAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
             L L  DE E +  +    + + N +    D  GD    +  D      A  Q+   + 
Sbjct: 502 TKLSLMGDEMEVAGAQAIATALKSNTTLTTLDWFGDAGAQAIAD------ALRQNKTLTT 555

Query: 209 QSHNTSNQSHM--SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSC--------CFALE 258
               T+    +  +L     L  L+LS N    +G   +A++L+S+         CF + 
Sbjct: 556 LQIGTAGLQAIGRALAQNNTLTTLNLSRNPIDDVGANSIAEMLKSNTSLTTLDQLCFKVH 615

Query: 259 ELK--LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           E+   L  N            AL     SS   G       FIA  N +   GA+ +A  
Sbjct: 616 EIAEALKQN-----------TALTTLDLSSNARG-------FIA-FNPIGAVGAQAIAEA 656

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            K+ KTL  + +  N I   G+  +++A + N  L  L L D +I       +  AL + 
Sbjct: 657 LKQNKTLTTLRLNNNAIGTAGVKPIAEALKVNTALTTLELEDCSIGDAETQAIAPALVQN 716

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAMKNKT-- 433
            +L  L LG+ +L  AGA SIA  L  N  L  + +T     V  G+ ++  A+K+ T  
Sbjct: 717 TTLTSLKLGNGVLGKAGAHSIATVLKQNAKLTTLEVTAR--FVDSGVQMIAAALKHNTTL 774

Query: 434 ---KLKQINVSENQFGEEGVEEM--EKLMKS------FGMAAAL 466
              KL+ +   + +F  E  E +  E+L+        FG+  AL
Sbjct: 775 TTFKLRDMKRYDPEFEREMSEPLTTERLLPQVRNPHGFGLEKAL 818



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 205/494 (41%), Gaps = 67/494 (13%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLN--LNDNTITYKGAIPLG 59
           +AA   + KTL  +   QN I  V    +SDA  +N  L  L+  L+ N     GA  + 
Sbjct: 247 IAAALAQNKTLTTL-WTQNYIDAV----MSDALTQNTTLTELSGYLDAN-----GARSMA 296

Query: 60  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           +AL++  +L  L++       A A+SIA  L  N+TL  + L   +I   G   + +A+K
Sbjct: 297 KALTQNATLTTLHVHSGKFGPAEANSIAAILKQNSTLTTLVLDNTKIGDLGAHAIGEALK 356

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE------- 172
           + T L  + + +N  G  G + + + +K+      LVL  + GE       E        
Sbjct: 357 SNTTLTALRLIDNDIGSAGTQAIGEALKTNLALTTLVLSTEIGEAGARAIAEALVCNKTL 416

Query: 173 ---SEEE---NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTG 224
              S+      D+  E     L  N +  S N  N      N +  +  Q+ +   L+  
Sbjct: 417 TTLSQYWCSIGDAGVEAIVHALEKNTTLTSLNLKN------NITLGSGAQAAIPRMLQVN 470

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
             L ELDL  N    +G + +A+ L  +   +L +L L  + + + G + ++ AL     
Sbjct: 471 TTLTELDLGANNLNSVGFQAIAEALAKNT--SLTKLSLMGDEMEVAGAQAIATAL----- 523

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
             K   +   L  F        + GA+ +A   ++ KTL  ++     I   G+ A+  A
Sbjct: 524 --KSNTTLTTLDWF-------GDAGAQAIADALRQNKTLTTLQ-----IGTAGLQAIGRA 569

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
             +N  L  LNL+ N I   GA  + + L    SL  L+   C         IA+ L  N
Sbjct: 570 LAQNNTLTTLNLSRNPIDDVGANSIAEMLKSNTSLTTLD-QLCF----KVHEIAEALKQN 624

Query: 405 TTLEDVNLTCN--------EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           T L  ++L+ N         I   G   + +A+K    L  + ++ N  G  GV+ + + 
Sbjct: 625 TALTTLDLSSNARGFIAFNPIGAVGAQAIAEALKQNKTLTTLRLNNNAIGTAGVKPIAEA 684

Query: 457 MKSFGMAAALVLED 470
           +K       L LED
Sbjct: 685 LKVNTALTTLELED 698



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 40/225 (17%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            SLK  + + EL+L  +  GPIG + +A+ L  +    +  L L++  LG  G + +SKAL
Sbjct: 868  SLKQNSWMTELNLRSSQVGPIGAQAIAEALTQNTKLII--LNLSSTQLGDAGAEAISKAL 925

Query: 280  HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                                    R+                TL  + + +  I   G  
Sbjct: 926  ------------------------RVNT--------------TLTTLNLRECWIGSTGAM 947

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            AL++  + N  L   +L+ N+I   GA  +   +S+  +L  L+LG   +  AGA  +A+
Sbjct: 948  ALAEELKHNVGLTSFDLSRNSIRDSGANAMAAVISQNTTLTTLDLGKNHIGDAGAERLAE 1007

Query: 400  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
             L  NTTL+ ++L  NEI   G L L  A+  K+    +N+SENQ
Sbjct: 1008 ALLRNTTLKVLDLWYNEIGEAGELALDNALNQKSAFVSLNLSENQ 1052



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 1/148 (0%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +LA   K+   +  + +  + +  +G  A+++A  +N KL  LNL+   +   GA  + +
Sbjct: 864  VLATSLKQNSWMTELNLRSSQVGPIGAQAIAEALTQNTKLIILNLSSTQLGDAGAEAISK 923

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            AL    +L  LNL +C + S GA ++A+ L  N  L   +L+ N I   G   +   +  
Sbjct: 924  ALRVNTTLTTLNLRECWIGSTGAMALAEELKHNVGLTSFDLSRNSIRDSGANAMAAVISQ 983

Query: 121  KTKLKQINVSENQFGEEGVEEM-EKLMK 147
             T L  +++ +N  G+ G E + E L++
Sbjct: 984  NTTLTTLDLGKNHIGDAGAERLAEALLR 1011



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%)

Query: 21  GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 80
           G+   G   L+ + ++N  +  LNL  + +   GA  + +AL++   L ILNL    L  
Sbjct: 856 GLDDFGAQVLATSLKQNSWMTELNLRSSQVGPIGAQAIAEALTQNTKLIILNLSSTQLGD 915

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           AGA +I+K L  NTTL  +NL    I   G + L + +K+   L   ++S N   + G  
Sbjct: 916 AGAEAISKALRVNTTLTTLNLRECWIGSTGAMALAEELKHNVGLTSFDLSRNSIRDSGAN 975

Query: 141 EMEKLM 146
            M  ++
Sbjct: 976 AMAAVI 981



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 3/133 (2%)

Query: 4    AVFKKLK---TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A+ K L+   TL  + + +  I   G  AL++  + N  L   +L+ N+I   GA  +  
Sbjct: 920  AISKALRVNTTLTTLNLRECWIGSTGAMALAEELKHNVGLTSFDLSRNSIRDSGANAMAA 979

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             +S+  +L  L+LG   +  AGA  +A+ L  NTTL+ ++L  NEI   G L L  A+  
Sbjct: 980  VISQNTTLTTLDLGKNHIGDAGAERLAEALLRNTTLKVLDLWYNEIGEAGELALDNALNQ 1039

Query: 121  KTKLKQINVSENQ 133
            K+    +N+SENQ
Sbjct: 1040 KSAFVSLNLSENQ 1052



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 12/161 (7%)

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN--LNDNTITYKGAIPLG 370
           +AA   + KTL  +   QN I  V    +SDA  +N  L  L+  L+ N     GA  + 
Sbjct: 247 IAAALAQNKTLTTL-WTQNYIDAV----MSDALTQNTTLTELSGYLDAN-----GARSMA 296

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
           +AL++  +L  L++       A A+SIA  L  N+TL  + L   +I   G   + +A+K
Sbjct: 297 KALTQNATLTTLHVHSGKFGPAEANSIAAILKQNSTLTTLVLDNTKIGDLGAHAIGEALK 356

Query: 431 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
           + T L  + + +N  G  G + + + +K+      LVL  +
Sbjct: 357 SNTTLTALRLIDNDIGSAGTQAIGEALKTNLALTTLVLSTE 397


>gi|156368357|ref|XP_001627661.1| predicted protein [Nematostella vectensis]
 gi|156214577|gb|EDO35561.1| predicted protein [Nematostella vectensis]
          Length = 294

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 13/232 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L++LDLS N     G   +A++L  +    LE  +L+ N +G  G   ++ AL       
Sbjct: 12  LIDLDLSLNKISSKGAIAIAEMLSKNQL--LETFRLSFNQIGDEGAIAIANAL------- 62

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            K  S L  K+    +N + NEGAK +A       TL+  ++    I   G  A+++A  
Sbjct: 63  -KTNSTL--KILDLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEGAIAIANALM 119

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N  L+ L L+D  I   G   L +     PSL  L+L    + S GA +IA+ L+ N  
Sbjct: 120 TNSTLKKLYLHDYGIRAVGIAALARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQL 179

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLM 457
           LE   L   +I  +G + +  A+   + LK++++  N  G+EG + + E LM
Sbjct: 180 LETFRLCLYQIGDEGAIAIANALMTNSTLKKLDLEGNYIGDEGAKAIAEALM 231



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 16/220 (7%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
           LS N  G  G   +A+ L+++    L+ L L  N +G  G K +++AL           +
Sbjct: 45  LSFNQIGDEGAIAIANALKTNST--LKILDLTKNNIGNEGAKAIAEALM----------T 92

Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
              LK F      + +EGA  +A       TL+++ +   GI  VGI AL+       +L
Sbjct: 93  NSTLKEFDLCDTNIGDEGAIAIANALMTNSTLKKLYLHDYGIRAVGIAALARTQLHKPSL 152

Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA--GASSIAKYLTDNTTLED 409
             L+L+ N I+ KGAI + + LSK   L    L  CL +    GA +IA  L  N+TL+ 
Sbjct: 153 IGLDLSSNQISSKGAIAIAEMLSKNQLLETFRL--CLYQIGDEGAIAIANALMTNSTLKK 210

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           ++L  N I  +G   + +A+   + LK++++ E+  G+EG
Sbjct: 211 LDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDEG 250



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ + +   GI  VGI AL+        L  L+L+ N I+ KGAI + + LSK   L  
Sbjct: 123 TLKKLYLHDYGIRAVGIAALARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKNQLLET 182

Query: 71  LNLGDCLLKSA--GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             L  CL +    GA +IA  L  N+TL+ ++L  N I  +G   + +A+   + LK+++
Sbjct: 183 FRL--CLYQIGDEGAIAIANALMTNSTLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELH 240

Query: 129 VSENQFGEEG 138
           + E+  G+EG
Sbjct: 241 LYESNIGDEG 250



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 1/137 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+  ++    I   G  A+++A   N  L+ L L+D  I   G   L +     PSL  
Sbjct: 95  TLKEFDLCDTNIGDEGAIAIANALMTNSTLKKLYLHDYGIRAVGIAALARTQLHKPSLIG 154

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    + S GA +IA+ L+ N  LE   L   +I  +G + +  A+   + LK++++ 
Sbjct: 155 LDLSSNQISSKGAIAIAEMLSKNQLLETFRLCLYQIGDEGAIAIANALMTNSTLKKLDLE 214

Query: 131 ENQFGEEGVEEM-EKLM 146
            N  G+EG + + E LM
Sbjct: 215 GNYIGDEGAKAIAEALM 231



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 145/350 (41%), Gaps = 73/350 (20%)

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
           PSL  L+L    + S GA +IA+ L+ N  LE   L+ N+I  +G + +  A+K  + LK
Sbjct: 10  PSLIDLDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLK 69

Query: 126 QINVSENQFGEEGVEEM-EKLM-----KSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
            +++++N  G EG + + E LM     K F +    +   DEG  +             +
Sbjct: 70  ILDLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNI--GDEGAIA------------IA 115

Query: 180 DAEGDNSNLSH-NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
           +A   NS L      ++   A   +     Q H  S            L+ LDLS N   
Sbjct: 116 NALMTNSTLKKLYLHDYGIRAVGIAALARTQLHKPS------------LIGLDLSSNQIS 163

Query: 239 PIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF 298
             G   +A++L  +    LE  +L                   C      EG+       
Sbjct: 164 SKGAIAIAEMLSKNQL--LETFRL-------------------CLYQIGDEGA------- 195

Query: 299 IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND 358
           IA  N L      M  +  KKL      ++  N I   G  A+++A   N  L+ L+L +
Sbjct: 196 IAIANAL------MTNSTLKKL------DLEGNYIGDEGAKAIAEALMTNSTLKELHLYE 243

Query: 359 NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
           + I  +GAI +  AL    +L  L+L    +++ GA+++A  L  NT LE
Sbjct: 244 SNIGDEGAIAIANALMTNSTLKKLHLHTYGIRAVGAAALADMLYYNTELE 293



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 71/137 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL+ +++ +N I + G  A+++A   N  L+  +L D  I  +GAI +  A
Sbjct: 58  IANALKTNSTLKILDLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEGAIAIANA 117

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L D  +++ G +++A+      +L  ++L+ N+IS +G + + + +   
Sbjct: 118 LMTNSTLKKLYLHDYGIRAVGIAALARTQLHKPSLIGLDLSSNQISSKGAIAIAEMLSKN 177

Query: 122 TKLKQINVSENQFGEEG 138
             L+   +   Q G+EG
Sbjct: 178 QLLETFRLCLYQIGDEG 194



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 6/154 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  K + LE   +  N I   G  A+++A + N  L+ L+L  N I  +GA  + +A
Sbjct: 30  IAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLKILDLTKNNIGNEGAKAIAEA 89

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L   +L D  +   GA +IA  L  N+TL+ + L    I   G   L +   +K
Sbjct: 90  LMTNSTLKEFDLCDTNIGDEGAIAIANALMTNSTLKKLYLHDYGIRAVGIAALARTQLHK 149

Query: 122 TKLKQINVSENQFGEEG---VEEM---EKLMKSF 149
             L  +++S NQ   +G   + EM    +L+++F
Sbjct: 150 PSLIGLDLSSNQISSKGAIAIAEMLSKNQLLETF 183



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%)

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
           +L  L+L+ N I+ KGAI + + LSK   L    L    +   GA +IA  L  N+TL+ 
Sbjct: 11  SLIDLDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLKI 70

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           ++LT N I  +G   + +A+   + LK+ ++ +   G+EG
Sbjct: 71  LDLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEG 110



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
           PSL  L+L    + S GA +IA+ L+ N  LE   L+ N+I  +G + +  A+K  + LK
Sbjct: 10  PSLIDLDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLK 69

Query: 437 QINVSENQFGEEGVEEM-EKLM 457
            +++++N  G EG + + E LM
Sbjct: 70  ILDLTKNNIGNEGAKAIAEALM 91



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 54/99 (54%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L  L+L+ N I+ KGAI + + LSK   L    L    +   GA +IA  L  N+TL+ +
Sbjct: 12  LIDLDLSLNKISSKGAIAIAEMLSKNQLLETFRLSFNQIGDEGAIAIANALKTNSTLKIL 71

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           +LT N I  +G   + +A+   + LK+ ++ +   G+EG
Sbjct: 72  DLTKNNIGNEGAKAIAEALMTNSTLKEFDLCDTNIGDEG 110



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 49/87 (56%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +++  N I   G  A+++A   N  L+ L+L ++ I  +GAI +  AL    +L  
Sbjct: 207 TLKKLDLEGNYIGDEGAKAIAEALMTNSTLKELHLYESNIGDEGAIAIANALMTNSTLKK 266

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLE 97
           L+L    +++ GA+++A  L  NT LE
Sbjct: 267 LHLHTYGIRAVGAAALADMLYYNTELE 293


>gi|395747418|ref|XP_002826110.2| PREDICTED: protein NLRC3 [Pongo abelii]
          Length = 1037

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 12/250 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD L+ +    L  L L  N +G  G + +++AL
Sbjct: 689 SLLVNRSLTSLDLRGNSIGPQGAKALADALKIN--RTLTSLSLQGNTIGDDGARSMAEAL 746

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                +S +  S L L+     +N +   GA+ +A   K+ ++L+ + +  N I   G  
Sbjct: 747 -----ASNRTLSMLHLQ-----KNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGGK 796

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL++A + N+ L  L+L +N+I+ +GA  +  AL    +L  L+L   LL   GA +IA 
Sbjct: 797 ALAEALKVNQGLESLDLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAV 856

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            + +N TL  ++L  N I       L +A++    L  +++ EN  G++G   + + +K 
Sbjct: 857 AVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKV 916

Query: 460 FGMAAALVLE 469
                AL L+
Sbjct: 917 NTALTALYLQ 926



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 170/413 (41%), Gaps = 71/413 (17%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 668  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 727

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    +   GA S+A+ L  N TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 728  SLQGNTIGDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSS 787

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEG-ECSDEEQDEESEEENDSDAEG--DNSNL 188
            N  G+ G           G A A  L+ ++G E  D  ++  S E   + A     NS L
Sbjct: 788  NSIGDGG-----------GKALAEALKVNQGLESLDLRENSISPEGAQAIAHALRANSTL 836

Query: 189  SHND--SNHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KTGARLVELD 231
             + D  +N  H+   ++   + + + T    H+                 +    L  LD
Sbjct: 837  KNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLD 896

Query: 232  LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
            L +NA G  G            C     LK+N              AL   Y      G+
Sbjct: 897  LQENAIGDDGA-----------CAVARALKVNT-------------ALTALYLQVASIGA 932

Query: 292  PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
            P                GA++L       +TLE +++  N I   G  AL++A + N +L
Sbjct: 933  P----------------GAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSL 976

Query: 352  RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            R LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  N
Sbjct: 977  RKLNLQENSLEMDGAICVATALSGNHRLQHINLQGNHIGDSGARMISEAIKTN 1029



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 170/378 (44%), Gaps = 31/378 (8%)

Query: 82   GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
            GA ++A+ L  N +L  ++L  N I  QG   L  A+K    L  +++  N  G++G   
Sbjct: 682  GAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTIGDDGARS 741

Query: 142  MEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASN 201
            M + + S    + L L+ +       ++  ++ ++N S  E   S+ S  D      A  
Sbjct: 742  MAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGGKALAE- 800

Query: 202  QSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK 261
                              +LK    L  LDL +N+  P G + +A  LR++    L+ L 
Sbjct: 801  ------------------ALKVNQGLESLDLRENSISPEGAQAIAHALRANS--TLKNLD 840

Query: 262  LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            L  N L   G + ++ A+ +      +  + L L+      N ++   A+ L    +  +
Sbjct: 841  LTANLLHDQGARAIAVAVRE-----NRTLTSLHLQW-----NFIQAGAAQALGQALQLNR 890

Query: 322  TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            +L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L I
Sbjct: 891  SLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEI 950

Query: 382  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
            L+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+ 
Sbjct: 951  LDLRGNAIGVAGAKALANALKVNSSLRKLNLQENSLEMDGAICVATALSGNHRLQHINLQ 1010

Query: 442  ENQFGEEGVEEMEKLMKS 459
             N  G+ G   + + +K+
Sbjct: 1011 GNHIGDSGARMISEAIKT 1028



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA + N+ L  L+L  NTI 
Sbjct: 676 NQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTIG 735

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL+   +L++L+L    +   GA  +A  L  N +L+++ L+ N I   GG
Sbjct: 736 DDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGG 795

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             L +A+K    L+ +++ EN    EG + +   +++
Sbjct: 796 KALAEALKVNQGLESLDLRENSISPEGAQAIAHALRA 832



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 890  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLE 949

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 950  ILDLRGNAIGVAGAKALANALKVNSSLRKLNLQENSLEMDGAICVATALSGNHRLQHINL 1009

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  G+ G   + + +K+
Sbjct: 1010 QGNHIGDSGARMISEAIKT 1028



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 66/123 (53%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + + +N I  +G   ++DA ++N+ L+ L L+ N+I   G   L +AL     L 
Sbjct: 750 RTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMLSSNSIGDGGGKALAEALKVNQGLE 809

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++    L  +++
Sbjct: 810 SLDLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHL 869

Query: 130 SEN 132
             N
Sbjct: 870 QWN 872



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 81/157 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ + +  N I   G  AL++A + N+ L  L+L +N+I+ +GA  +  A
Sbjct: 770 MADALKQNRSLKELMLSSNSIGDGGGKALAEALKVNQGLESLDLRENSISPEGAQAIAHA 829

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 830 LRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 889

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G++G   + + +K      AL L+
Sbjct: 890 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 926



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 67/137 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 854 IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 913

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    + + GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 914 LKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 973

Query: 122 TKLKQINVSENQFGEEG 138
           + L+++N+ EN    +G
Sbjct: 974 SSLRKLNLQENSLEMDG 990



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 69/141 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL  + +  N I   G  ++++A   N+ L  L+L  N+I   GA  +  A
Sbjct: 714 LADALKINRTLTSLSLQGNTIGDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADA 773

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L L    +   G  ++A+ L  N  LE ++L  N IS +G   +  A++  
Sbjct: 774 LKQNRSLKELMLSSNSIGDGGGKALAEALKVNQGLESLDLRENSISPEGAQAIAHALRAN 833

Query: 122 TKLKQINVSENQFGEEGVEEM 142
           + LK ++++ N   ++G   +
Sbjct: 834 STLKNLDLTANLLHDQGARAI 854



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL++A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 946  RTLEILDLRGNAIGVAGAKALANALKVNSSLRKLNLQENSLEMDGAICVATALSGNHRLQ 1005

Query: 70   ILNLGDCLLKSAGASSIAKYLTDN 93
             +NL    +  +GA  I++ +  N
Sbjct: 1006 HINLQGNHIGDSGARMISEAIKTN 1029



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 70/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   +   TL+++++  N ++  G  A++ A  EN+ L  L+L  N I    A  LGQA
Sbjct: 826 IAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQA 885

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL  L+L +  +   GA ++A+ L  NT L  + L    I   G   L +A+   
Sbjct: 886 LQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVN 945

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L+ +++  N  G  G + +   +K
Sbjct: 946 RTLEILDLRGNAIGVAGAKALANALK 971


>gi|188536002|ref|NP_001120934.1| NACHT, LRR and PYD domains-containing protein 3 isoform d [Homo
           sapiens]
 gi|109658828|gb|AAI17212.1| NLRP3 protein [Homo sapiens]
 gi|219517810|gb|AAI43364.1| NLR family, pyrin domain containing 3 [Homo sapiens]
          Length = 979

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +        SH       + L +  +LVELDLSDNA G  G+  L        C 
Sbjct: 712 SHAACSHGLGRCGLSHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CV 763

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            L+ L  N   L +  C L S     C + +    +  +L     G N L + G  +L  
Sbjct: 764 GLKHLLCNLKKLWLVSCCLTSAC---CQDLASVLSTSHSLTRLYVGENALGDSGVAILCE 820

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K  +  L+++ +  +G+  V  +ALS     N+NL HL L  NT+  KG   L + L 
Sbjct: 821 KAKNPQCNLQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLL 880

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 881 H-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 939

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 940 SCLLQNLGLSEMYFNYETKSALETL 964



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
           L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 829 LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 887

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
           +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 888 VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 947

Query: 129 VSENQFGEEGVEEMEKL 145
           +SE  F  E    +E L
Sbjct: 948 LSEMYFNYETKSALETL 964


>gi|37693719|gb|AAQ98889.1| cryopyrin deletion 4 isoform [Homo sapiens]
 gi|119597593|gb|EAW77187.1| cold autoinflammatory syndrome 1, isoform CRA_d [Homo sapiens]
          Length = 977

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +        SH       + L +  +LVELDLSDNA G  G+  L        C 
Sbjct: 710 SHAACSHGLGRCGLSHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CV 761

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            L+ L  N   L +  C L S     C + +    +  +L     G N L + G  +L  
Sbjct: 762 GLKHLLCNLKKLWLVSCCLTSAC---CQDLASVLSTSHSLTRLYVGENALGDSGVAILCE 818

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K  +  L+++ +  +G+  V  +ALS     N+NL HL L  NT+  KG   L + L 
Sbjct: 819 KAKNPQCNLQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLL 878

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 879 H-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 937

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 938 SCLLQNLGLSEMYFNYETKSALETL 962



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
           L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 827 LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 885

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
           +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 886 VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 945

Query: 129 VSENQFGEEGVEEMEKL 145
           +SE  F  E    +E L
Sbjct: 946 LSEMYFNYETKSALETL 962


>gi|325187206|emb|CCA21746.1| phosphoacetylglucosamine mutase putative [Albugo laibachii Nc14]
          Length = 1285

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 87/163 (53%)

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           +V   G   L N   K+L+++  K +TL  +++  N I   G   L+ A E+N +L  + 
Sbjct: 75  QVLKLGGYSLGNSSTKILSSILFKNQTLRTLDLGFNRINDKGANLLAKALEKNTSLERIY 134

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L+ N I   GA    +AL    +L  L+L    +  AGA ++AK L  N  L ++ +  N
Sbjct: 135 LSGNEIGLAGADAFSKALCTNSTLKTLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTN 194

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            I   G LD+V+A++N T L+++ +S+N+ G EGV  + +  K
Sbjct: 195 GIGSTGMLDIVRALENNTVLQELTLSQNRIGNEGVRHLAEAFK 237



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 14/257 (5%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L+++  K +TL  +++  N I   G   L+ A E+N  L  + L+ N I   GA    +
Sbjct: 91  ILSSILFKNQTLRTLDLGFNRINDKGANLLAKALEKNTSLERIYLSGNEIGLAGADAFSK 150

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  L+L    +  AGA ++AK L  N  L ++ +  N I   G LD+V+A++N
Sbjct: 151 ALCTNSTLKTLHLSGNNIGEAGAQALAKGLRTNRCLRNLYIGTNGIGSTGMLDIVRALEN 210

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE---DDEGE-----CSDEEQDEE 172
            T L+++ +S+N+ G EGV  + +  K  G      LE   +D G       +D  Q  +
Sbjct: 211 NTVLQELTLSQNRIGNEGVRHLAEAFKR-GKLHITTLEIGKNDIGSRGAELLADALQQVQ 269

Query: 173 SEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDL 232
            + E DS+       +   D     NAS  S +NS Q  +   +++ +     +L  L +
Sbjct: 270 IDAEGDSEGSTSEVLVGEQDDAREGNASEVSISNSCQEKSMEARTNRN-----QLQNLYI 324

Query: 233 SDNAFGPIGVEGLADLL 249
            +N  G  G +    +L
Sbjct: 325 DNNPIGDAGAQAFGKML 341


>gi|402858417|ref|XP_003893703.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
           2 [Papio anubis]
          Length = 978

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +        SH       + L +  +LVELDLSDNA G  G+  L        C 
Sbjct: 711 SHAACSHRLGRCGLSHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CV 762

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            L+ L  N   L +  C L S     C + +    +  +L     G N L + G  +L  
Sbjct: 763 GLKHLLCNLKKLWLVSCCLTSAC---CPDLASVLSTNCSLTRLYVGENALGDAGVAILCE 819

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K  +  L+++ +  +G+  V  +ALS     N+NL HL L  NT+  KG   L + L 
Sbjct: 820 KAKNPQCNLQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLL 879

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 880 H-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 938

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 939 SCLLQNLGLSEMYFNYETKSALETL 963



 Score = 41.6 bits (96), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
           L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 828 LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 886

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
           +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 887 VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 946

Query: 129 VSENQFGEEGVEEMEKL 145
           +SE  F  E    +E L
Sbjct: 947 LSEMYFNYETKSALETL 963


>gi|440791605|gb|ELR12843.1| NLR family, CARD domain containing 3, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 341

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 37/259 (14%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------KALHDCY 283
           L L  N  GP G+  L+  L  +    +  L ++ N LG+ G K L+      + L + Y
Sbjct: 52  LSLKGNFIGPAGMRELSSALEGN--LTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVY 109

Query: 284 ESSKK---EG--------------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKT---- 322
            S      EG              S L L++     NR+ + GAK +AA+    K     
Sbjct: 110 ASGNNLDNEGVAALAEALRTNATVSTLNLQL-----NRISDAGAKDIAAILANNKAHTLT 164

Query: 323 ---LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  +++  N I  VG  +L+D  + N+ L  L L  N IT +G + L ++L    +L
Sbjct: 165 GLNLTHLDLGWNHITQVGARSLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHAL 224

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
             LN+  C L+  G +SIA  L  N TLE++ +  N ++ QG   L   +K    LK+++
Sbjct: 225 TFLNIASCNLRKTGGTSIAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLKKLD 284

Query: 440 VSENQFGEEGVEEMEKLMK 458
           + EN+   +G   + ++ +
Sbjct: 285 LCENRIDLDGAVALAEIFR 303



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDL  N  GP G   LA  + +S    L  L L  N +G  G + LS AL         E
Sbjct: 24  LDLWSNGIGPAGAASLAKGIFASG--HLHTLSLKGNFIGPAGMRELSSAL---------E 72

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
           G+     + ++G NRL  EG K LA++    + L+ V    N + + G+ AL++A   N 
Sbjct: 73  GNLTVTTLDVSG-NRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAALAEALRTNA 131

Query: 350 NLRHLNLNDNTITYKGAIPLGQALS--KLPSLAILNL-----GDCLLKSAGASSIAKYLT 402
            +  LNL  N I+  GA  +   L+  K  +L  LNL     G   +   GA S+A  L 
Sbjct: 132 TVSTLNLQLNRISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQVGARSLADMLK 191

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            N  L  + L  N I+ +GG+ L ++++N   L  +N++     + G   +  L++
Sbjct: 192 ANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTSIAALLR 247



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 73/136 (53%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L H+++  N I  VG  +L+D  + N+ L  L L  N IT +G + L ++L    +L  L
Sbjct: 168 LTHLDLGWNHITQVGARSLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFL 227

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           N+  C L+  G +SIA  L  N TLE++ +  N ++ QG   L   +K    LK++++ E
Sbjct: 228 NIASCNLRKTGGTSIAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLKKLDLCE 287

Query: 132 NQFGEEGVEEMEKLMK 147
           N+   +G   + ++ +
Sbjct: 288 NRIDLDGAVALAEIFR 303



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 153/355 (43%), Gaps = 24/355 (6%)

Query: 53  KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 112
           +G + LG+AL +   +  L+L    +  AGA+S+AK +  +  L  ++L  N I   G  
Sbjct: 6   EGGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPAGMR 65

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           +L  A++    +  ++VS N+ G EG + +  L+ +      +      G   D E    
Sbjct: 66  ELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVY---ASGNNLDNEGVAA 122

Query: 173 SEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDL 232
             E   ++A     NL  N  + +      +   +N++H           TG  L  LDL
Sbjct: 123 LAEALRTNATVSTLNLQLNRISDAGAKDIAAILANNKAHTL---------TGLNLTHLDL 173

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
             N    +G   LAD+L+++             GLG+ G ++ ++     Y     E + 
Sbjct: 174 GWNHITQVGARSLADMLKANRVLC---------GLGLEGNRITAEG--GMYLCESLENNH 222

Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
               + IA  N L   G   +AA+ +K  TLE + + +NG+   G+ +L+D  + N  L+
Sbjct: 223 ALTFLNIASCN-LRKTGGTSIAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLK 281

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
            L+L +N I   GA+ L +       L  + L    L   G  ++ +  T NT L
Sbjct: 282 KLDLCENRIDLDGAVALAEIFRLNNGLTHVKLAGNALTDEGVFALKEAATRNTKL 336



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 141/346 (40%), Gaps = 32/346 (9%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  AL  A E    +R L+L  N I   GA  L + +     L  L+L    +  AG   
Sbjct: 7   GGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPAGMRE 66

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           ++  L  N T+  ++++ N + V+GG  L   +     LK +  S N    EGV  + + 
Sbjct: 67  LSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAALAEA 126

Query: 146 MKSFGMAAALVLEDDEGECSDE-EQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSH 204
           +++    + L L+ +    SD   +D  +   N+        NL+H D   +H     + 
Sbjct: 127 LRTNATVSTLNLQLNR--ISDAGAKDIAAILANNKAHTLTGLNLTHLDLGWNHITQVGAR 184

Query: 205 NNSN-------------QSHNTSNQSHM----SLKTGARLVELDLSDNAFGPIGVEGLAD 247
           + ++             + +  + +  M    SL+    L  L+++       G   +A 
Sbjct: 185 SLADMLKANRVLCGLGLEGNRITAEGGMYLCESLENNHALTFLNIASCNLRKTGGTSIAA 244

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
           LLR +    LEEL +  NGL   G + L+  L             L LK      NR++ 
Sbjct: 245 LLRKNAT--LEELIVKKNGLTSQGVQSLADGLK----------RNLVLKKLDLCENRIDL 292

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
           +GA  LA +F+    L  V++  N +   G+ AL +A   N  L +
Sbjct: 293 DGAVALAEIFRLNNGLTHVKLAGNALTDEGVFALKEAATRNTKLTY 338



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 59/133 (44%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G  AL  A E    +R L+L  N I   GA  L + +     L  L+L    +  AG   
Sbjct: 7   GGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPAGMRE 66

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           ++  L  N T+  ++++ N + V+GG  L   +     LK +  S N    EGV  + + 
Sbjct: 67  LSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAALAEA 126

Query: 457 MKSFGMAAALVLE 469
           +++    + L L+
Sbjct: 127 LRTNATVSTLNLQ 139



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 68/150 (45%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           EG   L    ++   +  +++  NGI   G  +L+     + +L  L+L  N I   G  
Sbjct: 6   EGGVALGRALERRVPIRSLDLWSNGIGPAGAASLAKGIFASGHLHTLSLKGNFIGPAGMR 65

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
            L  AL    ++  L++    L   G  ++A  LT N  L++V  + N +  +G   L +
Sbjct: 66  ELSSALEGNLTVTTLDVSGNRLGVEGGKALASLLTANQHLKNVYASGNNLDNEGVAALAE 125

Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           A++    +  +N+  N+  + G +++  ++
Sbjct: 126 ALRTNATVSTLNLQLNRISDAGAKDIAAIL 155



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +AA+ +K  TLE + + +NG+   G+ +L+D  + N  L+ L+L +N I   GA+ L + 
Sbjct: 242 IAALLRKNATLEELIVKKNGLTSQGVQSLADGLKRNLVLKKLDLCENRIDLDGAVALAEI 301

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
                 L  + L    L   G  ++ +  T NT L
Sbjct: 302 FRLNNGLTHVKLAGNALTDEGVFALKEAATRNTKL 336


>gi|320170242|gb|EFW47141.1| hypothetical protein CAOG_05085 [Capsaspora owczarzaki ATCC 30864]
          Length = 420

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 86/154 (55%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           G N++ + GA+ +A   K   T+ R+ + QN I   G  A+++  + NK L  L L DN 
Sbjct: 76  GINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNR 135

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I+  GA P+ +AL    +L  L+LG   + + G  +IA+ L  NT+L + NL  N+I  +
Sbjct: 136 ISDAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDE 195

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
           G   + +A+K  T +K++N++ N  G+   + ++
Sbjct: 196 GAKAIAEALKVNTSVKKLNLAFNCIGKVAAQAIQ 229



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 77/142 (54%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  + + QN I   G  A+++  + NK L  L L DN I+  GA P+ +A
Sbjct: 88  IAETLKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEA 147

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+LG   + + G  +IA+ L  NT+L + NL  N+I  +G   + +A+K  
Sbjct: 148 LKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDEGAKAIAEALKVN 207

Query: 122 TKLKQINVSENQFGEEGVEEME 143
           T +K++N++ N  G+   + ++
Sbjct: 208 TSVKKLNLAFNCIGKVAAQAIQ 229



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 81/156 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++   G   +A   K   ++  + +  N I   G  A+++  + N  +  L L+ N I 
Sbjct: 50  NQIREGGMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIG 109

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + + L    +L+ L LGD  +  AGA+ IA+ L  NTTL  ++L  N+I   G 
Sbjct: 110 EAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGM 169

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + + +A+K  T L + N++ NQ G+EG + + + +K
Sbjct: 170 MAIAEALKVNTSLTEHNLNVNQIGDEGAKAIAEALK 205



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 70/128 (54%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  A+++  + N  +  L L+ N I   GA  + + L    +L+ L LGD  + 
Sbjct: 78  NQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEAGAQAIAETLKVNKTLSELYLGDNRIS 137

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            AGA+ IA+ L  NTTL  ++L  N+I   G + + +A+K  T L + N++ NQ G+EG 
Sbjct: 138 DAGATPIAEALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNTSLTEHNLNVNQIGDEGA 197

Query: 140 EEMEKLMK 147
           + + + +K
Sbjct: 198 KAIAEALK 205



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 64/128 (50%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G+ A+++A + N  +  L L  N I   GA  + + L    ++  L L    + 
Sbjct: 50  NQIREGGMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIG 109

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            AGA +IA+ L  N TL ++ L  N IS  G   + +A+K  T L  +++ +NQ G  G+
Sbjct: 110 EAGAQAIAETLKVNKTLSELYLGDNRISDAGATPIAEALKVNTTLTALDLGKNQIGNLGM 169

Query: 140 EEMEKLMK 147
             + + +K
Sbjct: 170 MAIAEALK 177



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 49/202 (24%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           ++  G ++IA+ L  NT++  + L  N+I   G   + + +K  T + ++ + +NQ GE 
Sbjct: 52  IREGGMNAIAEALKVNTSVTALGLGINQIGDAGAQAIAETLKVNTTVTRLYLDQNQIGEA 111

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G + + + +K     + L L                         GDN     +D+  + 
Sbjct: 112 GAQAIAETLKVNKTLSELYL-------------------------GDN---RISDAGATP 143

Query: 198 NASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
            A                    +LK    L  LDL  N  G +G+  +A+ L+ +   +L
Sbjct: 144 IAE-------------------ALKVNTTLTALDLGKNQIGNLGMMAIAEALKVNT--SL 182

Query: 258 EELKLNNNGLGITGCKLLSKAL 279
            E  LN N +G  G K +++AL
Sbjct: 183 TEHNLNVNQIGDEGAKAIAEAL 204


>gi|434403643|ref|YP_007146528.1| hypothetical protein Cylst_1568 [Cylindrospermum stagnale PCC 7417]
 gi|428257898|gb|AFZ23848.1| hypothetical protein Cylst_1568 [Cylindrospermum stagnale PCC 7417]
          Length = 388

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 23/213 (10%)

Query: 239 PIGVEGLADLLRSSCCF--ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
           PIG+ G A  +    C   ++  L L N  +G  G  ++  AL   +++   E      +
Sbjct: 142 PIGLSG-ASFIAEMLCHNHSIRTLDLVNTNIGDQGLAIIIDAL--IHQNRTVE------R 192

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           +++ G N+++ +GA++LA + +K   ++ + +  N +   G  AL++A ++N  L  L +
Sbjct: 193 LYLGG-NQIDCKGAQLLATLLRKNSAIKAILLNVNDLGDAGAVALAEALQQNHTLVELGV 251

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCL-----------LKSAGASSIAKYLTDNT 405
             N IT +G I L +A+ K P+L  ++LG              L  AGA +IA  L +N 
Sbjct: 252 ASNGITPQGGIRLIEAIQKHPALVNVDLGYSQSTRVLGAIANSLGDAGAEAIANLLVNNQ 311

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           TL  +NL  N I+ QG L L+  +++   ++Q+
Sbjct: 312 TLRKINLRRNGITEQGKLSLIAGLQHNRTIRQL 344



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA + +K   ++ + +  N +   G  AL++A ++N  L  L +  N IT +G I L +
Sbjct: 207 LLATLLRKNSAIKAILLNVNDLGDAGAVALAEALQQNHTLVELGVASNGITPQGGIRLIE 266

Query: 61  ALSKLPSLAILNLGDCL-----------LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 109
           A+ K P+L  ++LG              L  AGA +IA  L +N TL  +NL  N I+ Q
Sbjct: 267 AIQKHPALVNVDLGYSQSTRVLGAIANSLGDAGAEAIANLLVNNQTLRKINLRRNGITEQ 326

Query: 110 GGLDLVKAMKNKTKLKQI 127
           G L L+  +++   ++Q+
Sbjct: 327 GKLSLIAGLQHNRTIRQL 344



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)

Query: 26  GITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL--AILNLGDCLLKSAG 82
           G+  + DA   +N+ +  L L  N I  KGA  L   L K  ++   +LN+ D  L  AG
Sbjct: 175 GLAIIIDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKAILLNVND--LGDAG 232

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ--------- 133
           A ++A+ L  N TL ++ +  N I+ QGG+ L++A++    L  +++  +Q         
Sbjct: 233 AVALAEALQQNHTLVELGVASNGITPQGGIRLIEAIQKHPALVNVDLGYSQSTRVLGAIA 292

Query: 134 --FGEEGVEEMEKLM 146
              G+ G E +  L+
Sbjct: 293 NSLGDAGAEAIANLL 307



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 133/327 (40%), Gaps = 43/327 (13%)

Query: 42  HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
            L+L    + Y G  P+ +AL+   ++A L LG   + +AGA+ +AK +  N  LE V L
Sbjct: 53  RLDLCKQGLGYLGFQPIAEALAANKTIASLLLGTNGIGNAGAADVAKLIECNQHLEVVYL 112

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
            CN+I+     +L  A+   T +  + +  N  G  G   + +++               
Sbjct: 113 GCNQIADIS--ELANALTKNTSVTGLWLKRNPIGLSGASFIAEML--------------- 155

Query: 162 GECSDEEQDEESEEENDSDAEGDNSNLSHNDSN---------HSHNASNQSHNNSNQSHN 212
             C            N S    D  N +  D           H +    + +   NQ   
Sbjct: 156 --C-----------HNHSIRTLDLVNTNIGDQGLAIIIDALIHQNRTVERLYLGGNQIDC 202

Query: 213 TSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG 271
              Q   + L+  + +  + L+ N  G  G   LA+ L+ +    L EL + +NG+   G
Sbjct: 203 KGAQLLATLLRKNSAIKAILLNVNDLGDAGAVALAEALQQN--HTLVELGVASNGITPQG 260

Query: 272 CKLLSKALHDCYESSKKE-GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
              L +A+         + G   + +V  A  N L + GA+ +A +    +TL ++ + +
Sbjct: 261 GIRLIEAIQKHPALVNVDLGYSQSTRVLGAIANSLGDAGAEAIANLLVNNQTLRKINLRR 320

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLN 357
           NGI   G  +L    + N+ +R L L+
Sbjct: 321 NGITEQGKLSLIAGLQHNRTIRQLILD 347



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 13/201 (6%)

Query: 259 ELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
            L L   GLG  G + +++AL     ++ K  + L L     G N + N GA  +A + +
Sbjct: 53  RLDLCKQGLGYLGFQPIAEAL-----AANKTIASLLL-----GTNGIGNAGAADVAKLIE 102

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
             + LE V +  N I    I+ L++A  +N ++  L L  N I   GA  + + L    S
Sbjct: 103 CNQHLEVVYLGCNQI--ADISELANALTKNTSVTGLWLKRNPIGLSGASFIAEMLCHNHS 160

Query: 379 LAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
           +  L+L +  +   G + I   L   N T+E + L  N+I  +G   L   ++  + +K 
Sbjct: 161 IRTLDLVNTNIGDQGLAIIIDALIHQNRTVERLYLGGNQIDCKGAQLLATLLRKNSAIKA 220

Query: 438 INVSENQFGEEGVEEMEKLMK 458
           I ++ N  G+ G   + + ++
Sbjct: 221 ILLNVNDLGDAGAVALAEALQ 241


>gi|410974869|ref|XP_003993862.1| PREDICTED: ribonuclease inhibitor [Felis catus]
          Length = 456

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 199/465 (42%), Gaps = 44/465 (9%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +   ++  + V +   G+  V    +  A + N  L  L+L  N +   G   + Q L  
Sbjct: 18  LLPLIQQYQVVRLDDCGLTEVRCKDICSALQANPSLTELSLCTNELHDAGVRLVLQGLQS 77

Query: 65  LPSLAI--LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-K 121
            PS  I  L+L +C L + G   +   L    TL ++ L+ N +   G   L K + + +
Sbjct: 78  -PSCRIQKLSLRNCCLTNTGCEVLPDALRSLPTLRELQLSDNPLGDAGLQLLCKGLLDPQ 136

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L+++ +          E +  +++++     LV+                   N+   
Sbjct: 137 CHLEKLQLEYCNLTAASCEPLAAVLRAWRHVKELVVS------------------NNDIG 178

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
           E     L     + +         N   +  +       + + A L ELDL DN  G  G
Sbjct: 179 EAGVQALCRGLVDSACQLETLKLENCGLTPASCKDLCGVVASKASLQELDLGDNKLGDQG 238

Query: 242 VEGLAD-LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           +  L   LL  S    L  L L +  +  TGC+ L + L    + S KE S       +A
Sbjct: 239 IATLCPALLHPS--SRLRVLWLWDCDITTTGCRDLCQVLR--AKESLKELS-------LA 287

Query: 301 GRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
           G N L +EGA++L  ++ +    L+ + +   G+  V    +S     NK+L  L ++DN
Sbjct: 288 G-NALGDEGARLLCESLLEPGCQLQSLWVKSCGLTAVCCPHVSAMLTHNKHLVELQMSDN 346

Query: 360 TITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            +   G   L Q LS+ PS  L +L LGDC + + G +S+A  L  N +L +++L+ N +
Sbjct: 347 KLGDSGVQELCQGLSQ-PSAMLRVLWLGDCDVANGGCNSLASLLVVNRSLRELDLSNNCM 405

Query: 418 SVQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             +G L L++++ +    L+Q+ + +  +     ++ E L+++ G
Sbjct: 406 DDRGILQLMESLERPDCALEQLVLYDIYW----TQQTEDLLQALG 446



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQ 60
           LAAV +  + ++ + +  N I   G+ AL     ++  +L  L L +  +T      L  
Sbjct: 157 LAAVLRAWRHVKELVVSNNDIGEAGVQALCRGLVDSACQLETLKLENCGLTPASCKDLCG 216

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
            ++   SL  L+LGD  L   G +++   L   ++ L  + L   +I+  G  DL + ++
Sbjct: 217 VVASKASLQELDLGDNKLGDQGIATLCPALLHPSSRLRVLWLWDCDITTTGCRDLCQVLR 276

Query: 120 NKTKLKQINVSENQFGEEG 138
            K  LK+++++ N  G+EG
Sbjct: 277 AKESLKELSLAGNALGDEG 295


>gi|344237526|gb|EGV93629.1| Protein NLRC3 [Cricetulus griseus]
          Length = 975

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 51/286 (17%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSS------------------CCFA----- 256
           SL     L+ LDL  NA GP G + LAD L+ +                   C A     
Sbjct: 686 SLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVS 745

Query: 257 ---LEELKLNNNGLGITGCKLLS------KALHDCYESSKK--EGSPLALKVFIAGRNRL 305
              +  L+L  N +G TG + ++      K+L +   SS    +G  +AL   + G   L
Sbjct: 746 NQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALKGNQGL 805

Query: 306 ENEGAKM------------LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
           EN  + +            +++    +++L+      N I + G+  L  A   N+ L  
Sbjct: 806 ENLDSSLDQTAVSRTWDSHISSALSFIRSLQ-----SNAISNTGVAVLMRALCVNQTLSS 860

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           LNL  N I    A  LGQAL    +L  L+L    + + GA ++ + L  N TLE ++L 
Sbjct: 861 LNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIGTQGAQALGEALAVNRTLEILDLR 920

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            N+I V G   L  A+K  + L+++N+  N  GE G   + + +K+
Sbjct: 921 GNDIGVAGAKALANALKLNSSLRRLNLQGNPIGESGARMISEAIKT 966



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 150/363 (41%), Gaps = 64/363 (17%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++++ + +N I + G  AL+ +   N+ L  L+L  N I  +GA  L  AL K  +L  L
Sbjct: 665 IQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSL 724

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            L   ++K  G   +A+ L  N T+  + L  N I   G   +  A+K    LK++  S 
Sbjct: 725 GLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSS 784

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           N  G+ G            MA A  L+ ++G               + D+  D + +S  
Sbjct: 785 NTIGDGG-----------AMALAEALKGNQG-------------LENLDSSLDQTAVSR- 819

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
            +  SH +S  S   S QS+  SN                            G+A L+R+
Sbjct: 820 -TWDSHISSALSFIRSLQSNAISN---------------------------TGVAVLMRA 851

Query: 252 SCC-FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            C    L  L L  N +     + L +AL        +  + L L+V   G      +GA
Sbjct: 852 LCVNQTLSSLNLQWNFIQAGAARALGQALQ-----LNRTLTTLDLQVASIG-----TQGA 901

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           + L       +TLE +++  N I   G  AL++A + N +LR LNL  N I   GA  + 
Sbjct: 902 QALGEALAVNRTLEILDLRGNDIGVAGAKALANALKLNSSLRRLNLQGNPIGESGARMIS 961

Query: 371 QAL 373
           +A+
Sbjct: 962 EAI 964



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 66/129 (51%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I + G+  L  A   N+ L  LNL  N I    A  LGQAL    +L  L+L    + 
Sbjct: 838 NAISNTGVAVLMRALCVNQTLSSLNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIG 897

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           + GA ++ + L  N TLE ++L  N+I V G   L  A+K  + L+++N+  N  GE G 
Sbjct: 898 TQGAQALGEALAVNRTLEILDLRGNDIGVAGAKALANALKLNSSLRRLNLQGNPIGESGA 957

Query: 140 EEMEKLMKS 148
             + + +K+
Sbjct: 958 RMISEAIKT 966



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 75/142 (52%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA ++N+ L  L L  N I 
Sbjct: 673 NQIGNKGAKALARSLLVNRSLITLDLRSNAIGPQGAKALADALKKNRTLTSLGLQSNMIK 732

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G + + +AL    +++IL L   L+   GA  +A  L  N +L+++  + N I   G 
Sbjct: 733 DNGVMCMAEALVSNQTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGA 792

Query: 423 LDLVKAMKNKTKLKQINVSENQ 444
           + L +A+K    L+ ++ S +Q
Sbjct: 793 MALAEALKGNQGLENLDSSLDQ 814



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++ + + +N I + G  AL+ +   N++L  L+L  N I
Sbjct: 644 NQFQDPVMELLGSVLSGKDCRIQNISLTENQIGNKGAKALARSLLVNRSLITLDLRSNAI 703

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL K  +L  L L   ++K  G   +A+ L  N T+  + L  N I   G
Sbjct: 704 GPQGAKALADALKKNRTLTSLGLQSNMIKDNGVMCMAEALVSNQTISILQLQKNLIGPTG 763

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++  S N  G+ G   + + +K
Sbjct: 764 AQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALK 800



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + +  N I      AL  A + N+ L  L+L   +I  +GA  LG+AL+   +L 
Sbjct: 856 QTLSSLNLQWNFIQAGAARALGQALQLNRTLTTLDLQVASIGTQGAQALGEALAVNRTLE 915

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           IL+L    +  AGA ++A  L  N++L  +NL  N I   G   + +A+K 
Sbjct: 916 ILDLRGNDIGVAGAKALANALKLNSSLRRLNLQGNPIGESGARMISEAIKT 966



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL------- 62
           +T+  +++ +N I   G   ++DA ++NK L+ L  + NTI   GA+ L +AL       
Sbjct: 747 QTISILQLQKNLIGPTGAQRMADALKQNKSLKELMFSSNTIGDGGAMALAEALKGNQGLE 806

Query: 63  ---SKLPSLAILNLGDCLLKSA---------------GASSIAKYLTDNTTLEDVNLTCN 104
              S L   A+    D  + SA               G + + + L  N TL  +NL  N
Sbjct: 807 NLDSSLDQTAVSRTWDSHISSALSFIRSLQSNAISNTGVAVLMRALCVNQTLSSLNLQWN 866

Query: 105 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
            I       L +A++    L  +++     G +G + +
Sbjct: 867 FIQAGAARALGQALQLNRTLTTLDLQVASIGTQGAQAL 904


>gi|342181262|emb|CCC90742.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 432

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 117/229 (51%), Gaps = 17/229 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L LS N  G   +  L+    ++C   L  + L+ N +G  G K L +A+    + +
Sbjct: 128 LFTLVLSANELGDATLLALSKA--AACHRDLMRVDLSFNKIGPLGTKCLMRAM----QRN 181

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL--KTLERVEMPQNGIYHVGITALSDA 344
              G  L         N++ +EG + L    K+   K+   + + +N + + G  A+   
Sbjct: 182 PNCGYDLM-------GNQIGDEGTEYLCEAMKRFAGKSTTGLNLFRNDVRYRGCRAVGHL 234

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL-T 402
            E N+ + +L+L+ NT+  +G   L   L++ P+ L  LNL +C+L  +GA+ IA  + +
Sbjct: 235 IENNEFIHNLSLHSNTLGLRGVQELRHHLTRAPNCLRSLNLSNCMLGDSGAAEIAAIIES 294

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           D  TLE +++  N+++  GG+ +VKA+ N T L  ++ S N FG + VE
Sbjct: 295 DMPTLERLSVADNDMTDAGGVTIVKALMNNTSLITVDCSNNTFGAKTVE 343



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCL 77
           +N + + G  A+    E N+ + +L+L+ NT+  +G   L   L++ P+ L  LNL +C+
Sbjct: 220 RNDVRYRGCRAVGHLIENNEFIHNLSLHSNTLGLRGVQELRHHLTRAPNCLRSLNLSNCM 279

Query: 78  LKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
           L  +GA+ IA  + +D  TLE +++  N+++  GG+ +VKA+ N T L  ++ S N FG 
Sbjct: 280 LGDSGAAEIAAIIESDMPTLERLSVADNDMTDAGGVTIVKALMNNTSLITVDCSNNTFGA 339

Query: 137 EGVE 140
           + VE
Sbjct: 340 KTVE 343



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 12/189 (6%)

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           + S KK  + L   V       L   G +++     K + + R+E+  N I  VG  AL+
Sbjct: 21  FYSRKKWRTVLLANVLELQGKELVPRGMQIIGNALTKNRHVVRLELAHNHIGDVGAIALA 80

Query: 343 DAFEENKNLRHLNLNDNTITYKGAI-----------PLGQALSKLPSLAILNLGDCLLKS 391
           D    N+ ++H+NL  N IT  G I           P GQA     +L  L L    L  
Sbjct: 81  DLLRRNETIQHVNLAQNDITDVGGIALASAFIPNVSPNGQAGQWNRTLFTLVLSANELGD 140

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           A   +++K    +  L  V+L+ N+I   G   L++AM+        ++  NQ G+EG E
Sbjct: 141 ATLLALSKAAACHRDLMRVDLSFNKIGPLGTKCLMRAMQRNPNCG-YDLMGNQIGDEGTE 199

Query: 452 EMEKLMKSF 460
            + + MK F
Sbjct: 200 YLCEAMKRF 208



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 12/160 (7%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAI---- 56
           ++     K + +  +E+  N I  VG  AL+D    N+ ++H+NL  N IT  G I    
Sbjct: 50  IIGNALTKNRHVVRLELAHNHIGDVGAIALADLLRRNETIQHVNLAQNDITDVGGIALAS 109

Query: 57  -------PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 109
                  P GQA     +L  L L    L  A   +++K    +  L  V+L+ N+I   
Sbjct: 110 AFIPNVSPNGQAGQWNRTLFTLVLSANELGDATLLALSKAAACHRDLMRVDLSFNKIGPL 169

Query: 110 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           G   L++AM+        ++  NQ G+EG E + + MK F
Sbjct: 170 GTKCLMRAMQRNPNCG-YDLMGNQIGDEGTEYLCEAMKRF 208



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 23/222 (10%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLR--SSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           L+ +DLS N  GP+G + L   ++   +C +      L  N +G  G + L +A+     
Sbjct: 156 LMRVDLSFNKIGPLGTKCLMRAMQRNPNCGY-----DLMGNQIGDEGTEYLCEAMKRFAG 210

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
            S        L +F   RN +   G + +  + +  + +  + +  N +   G+  L   
Sbjct: 211 KSTT-----GLNLF---RNDVRYRGCRAVGHLIENNEFIHNLSLHSNTLGLRGVQELRHH 262

Query: 345 FEENKN-LRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLT 402
                N LR LNL++  +   GA  +   + S +P+L  L++ D  +  AG  +I K L 
Sbjct: 263 LTRAPNCLRSLNLSNCMLGDSGAAEIAAIIESDMPTLERLSVADNDMTDAGGVTIVKALM 322

Query: 403 DNTTLEDVNLTCNEI---SVQGGLDLVKAMKNKTKLKQINVS 441
           +NT+L  V+ + N     +V+  + LV+  K    LKQ++ +
Sbjct: 323 NNTSLITVDCSNNTFGAKTVEATMLLVEKAK---VLKQLDFT 361


>gi|32966217|gb|AAP92145.1| leucine-rich repeat protein N6C [synthetic construct]
          Length = 415

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 19/232 (8%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC-- 282
           ARL +L L+ N     G++ LA +LRS+   +L EL L+NN LG  G +LL + L D   
Sbjct: 39  ARLEQLKLNKNDLTEAGLKDLASVLRSNP--SLRELSLSNNKLGDAGVRLLLQGLLDPGT 96

Query: 283 -YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
             ES K + + L               G K LA+V +   +L  + +  N +   G+  L
Sbjct: 97  RLESLKLQSTDLT------------EAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLL 144

Query: 342 SDA-FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
                +    L  L+LND  +T  G   L   L   PSL  L+L    L  AG   + + 
Sbjct: 145 LQGLLDPGTRLEKLDLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQG 204

Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           L D  T LE + L  N+++  G  DL   +++   L+++N+S+N+ G+ GV 
Sbjct: 205 LLDPGTRLEKLYLEDNDLTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVR 256



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 183/433 (42%), Gaps = 79/433 (18%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
           +L  L LN N +T  G   L   L   PSL  L+L +  L  AG   + + L D  T LE
Sbjct: 40  RLEQLKLNKNDLTEAGLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLE 99

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
            + L   +++  G  DL   +++   L+++N+S N+ G+ GV  + + +   G       
Sbjct: 100 SLKLQSTDLTEAGLKDLASVLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRL---- 155

Query: 158 EDDEGECSDEEQDEESEEENDSD-AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
                         E  + ND+D  E    +L+      S   SN S    + S N    
Sbjct: 156 --------------EKLDLNDTDLTEAGVKDLA------SVLRSNPSLRELSLSTNKLGD 195

Query: 217 SHMS------LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGIT 270
           + +       L  G RL +L L DN     G++ LA +LRS+   +L EL L++N LG  
Sbjct: 196 AGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLASVLRSNP--SLRELNLSDNKLGDA 253

Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
           G +LL + L D                           G +           LE +++  
Sbjct: 254 GVRLLLQGLLDP--------------------------GTR-----------LEELQLRN 276

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL----SKLPSLAILNLGD 386
             +   G+  L+     N +LR L+L++N +   G   L Q L    ++L  L + N   
Sbjct: 277 TDLTEAGVEDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLRNTD- 335

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQF 445
             L  AG   +A  L  N +L +++L+ N++   G   L++ + +  T+L+Q+ + +  +
Sbjct: 336 --LTEAGMKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEQLVLYDIYW 393

Query: 446 GEEGVEEMEKLMK 458
            EE  + ++ L K
Sbjct: 394 SEEMEDRLQALEK 406



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 145/343 (42%), Gaps = 32/343 (9%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA+V +   +L  + +  N +   G+  L     +   +L  L L    +T  G   L  
Sbjct: 59  LASVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLESLKLQSTDLTEAGLKDLAS 118

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L   PSL  LNL    L  AG   + + L D  T LE ++L   +++  G  DL   ++
Sbjct: 119 VLRSNPSLRELNLSTNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVKDLASVLR 178

Query: 120 NKTKLKQINVSENQFGEEGVE-EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEND 178
           +   L+++++S N+ G+ GV   ++ L+        L LED                 ND
Sbjct: 179 SNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLED-----------------ND 221

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
               G     S   SN S    N S N    +        + L  G RL EL L +    
Sbjct: 222 LTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLLQGL-LDPGTRLEELQLRNTDLT 280

Query: 239 PIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF 298
             GVE LA +LRS+   +L EL L+NN LG  G +LL + L D        G+ L  K++
Sbjct: 281 EAGVEDLASVLRSNP--SLRELSLSNNKLGDAGVRLLLQGLLDP-------GTRLE-KLY 330

Query: 299 IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
           +   + L   G K LA+V +   +L  + +  N +   G+  L
Sbjct: 331 LRNTD-LTEAGMKDLASVLRSNPSLRELSLSTNKLGDAGVRLL 372


>gi|343470248|emb|CCD16998.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 432

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 117/229 (51%), Gaps = 17/229 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L LS N  G   +  L+    ++C   L  + L+ N +G  G K L +A+    + +
Sbjct: 128 LFTLVLSANELGDATLLALSKA--AACHRDLMRVDLSFNKIGPLGTKCLMRAM----QRN 181

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL--KTLERVEMPQNGIYHVGITALSDA 344
              G  L         N++ +EG + L    K+   K+   + + +N + + G  A+   
Sbjct: 182 PNCGYDLM-------GNQIGDEGTEYLCEAMKRFAGKSTTGLNLFRNDVRYRGCKAVGHL 234

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL-T 402
            E N+ + +L+L+ NT+  +G   L   L++ P+ L  LNL +C+L  +GA+ IA  + +
Sbjct: 235 IENNEFIHNLSLHSNTLGLRGVQELRHHLTRAPNCLRSLNLSNCMLGDSGAAEIAAIIES 294

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           D  TLE +++  N+++  GG+ +VKA+ N T L  ++ S N FG + VE
Sbjct: 295 DMPTLERLSVADNDMTDAGGVTIVKALMNNTSLITVDCSNNTFGAKTVE 343



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCL 77
           +N + + G  A+    E N+ + +L+L+ NT+  +G   L   L++ P+ L  LNL +C+
Sbjct: 220 RNDVRYRGCKAVGHLIENNEFIHNLSLHSNTLGLRGVQELRHHLTRAPNCLRSLNLSNCM 279

Query: 78  LKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
           L  +GA+ IA  + +D  TLE +++  N+++  GG+ +VKA+ N T L  ++ S N FG 
Sbjct: 280 LGDSGAAEIAAIIESDMPTLERLSVADNDMTDAGGVTIVKALMNNTSLITVDCSNNTFGA 339

Query: 137 EGVE 140
           + VE
Sbjct: 340 KTVE 343



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 12/189 (6%)

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           + S KK  + L   V       L   G +++     K + + R+E+  N I  VG  AL+
Sbjct: 21  FYSRKKWRTVLLANVLELQGKELVPRGMQIIGNALTKNRHVVRLELAHNHIGDVGAIALA 80

Query: 343 DAFEENKNLRHLNLNDNTITYKGAI-----------PLGQALSKLPSLAILNLGDCLLKS 391
           D    N+ ++H+NL  N IT  G I           P GQA     +L  L L    L  
Sbjct: 81  DLLRRNETIQHVNLAQNDITDVGGIALASAFIPNVSPNGQAGQWNRTLFTLVLSANELGD 140

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           A   +++K    +  L  V+L+ N+I   G   L++AM+        ++  NQ G+EG E
Sbjct: 141 ATLLALSKAAACHRDLMRVDLSFNKIGPLGTKCLMRAMQRNPNCG-YDLMGNQIGDEGTE 199

Query: 452 EMEKLMKSF 460
            + + MK F
Sbjct: 200 YLCEAMKRF 208



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 12/160 (7%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAI---- 56
           ++     K + +  +E+  N I  VG  AL+D    N+ ++H+NL  N IT  G I    
Sbjct: 50  IIGNALTKNRHVVRLELAHNHIGDVGAIALADLLRRNETIQHVNLAQNDITDVGGIALAS 109

Query: 57  -------PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 109
                  P GQA     +L  L L    L  A   +++K    +  L  V+L+ N+I   
Sbjct: 110 AFIPNVSPNGQAGQWNRTLFTLVLSANELGDATLLALSKAAACHRDLMRVDLSFNKIGPL 169

Query: 110 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           G   L++AM+        ++  NQ G+EG E + + MK F
Sbjct: 170 GTKCLMRAMQRNPNCG-YDLMGNQIGDEGTEYLCEAMKRF 208



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 23/222 (10%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLR--SSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           L+ +DLS N  GP+G + L   ++   +C +      L  N +G  G + L +A+     
Sbjct: 156 LMRVDLSFNKIGPLGTKCLMRAMQRNPNCGY-----DLMGNQIGDEGTEYLCEAMKRFAG 210

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
            S        L +F   RN +   G K +  + +  + +  + +  N +   G+  L   
Sbjct: 211 KSTT-----GLNLF---RNDVRYRGCKAVGHLIENNEFIHNLSLHSNTLGLRGVQELRHH 262

Query: 345 FEENKN-LRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLT 402
                N LR LNL++  +   GA  +   + S +P+L  L++ D  +  AG  +I K L 
Sbjct: 263 LTRAPNCLRSLNLSNCMLGDSGAAEIAAIIESDMPTLERLSVADNDMTDAGGVTIVKALM 322

Query: 403 DNTTLEDVNLTCNEI---SVQGGLDLVKAMKNKTKLKQINVS 441
           +NT+L  V+ + N     +V+  + LV+  K    LKQ++ +
Sbjct: 323 NNTSLITVDCSNNTFGAKTVEATMLLVEKAK---VLKQLDFT 361


>gi|384246674|gb|EIE20163.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
          Length = 660

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 172/375 (45%), Gaps = 26/375 (6%)

Query: 16  EMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 75
           ++ +NGI   GITA++DA   N  L+ L L+ N+I  +GA  L + L+   ++  LNL  
Sbjct: 245 DLSKNGIGVKGITAVTDALSHNDVLQTLVLDTNSIGDEGAEVLAKHLTGDSTIRRLNLSG 304

Query: 76  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
             +   GA+ +A+ L  NTTL  + L  N I   G L L +A+   T L  +++S+N  G
Sbjct: 305 NNVGDKGATLLAEMLKMNTTLTSLELNSNNIDYDGALALAEAITENTSLSALHLSDNYIG 364

Query: 136 EEGVEEMEKLMKSFGMAAALVLE----DDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
             G   +   +K       L ++     +EG  +  E   E +    S   G+NS L+  
Sbjct: 365 ALGASVLANALKKNKSLRELHMKGNELGNEGVRAICEALIERQSPVTSLDFGNNS-LTEE 423

Query: 192 DSNHSHNASNQSH-NNSNQSHNTSNQSHM-----SLKTGARLVELDLSDNAFGPIGVEGL 245
            +      ++++H    N   N    + +     +L+  + LV LD+  N  GP G+  L
Sbjct: 424 GAEAIARVADKAHLKELNLYMNDIGDAGIFKLAKALEGDSSLVSLDVGGNNVGPDGITAL 483

Query: 246 ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
           A  LR +    L  L+L  N +G  G   L+  +   Y+        L ++    G   +
Sbjct: 484 AGALRGNDT--LRTLELGYNPIGDKGALALADVVK--YD--------LKVETLKMGWCHV 531

Query: 306 -ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN--LRHLNLNDNTIT 362
             + GAK +A +     ++  +++  NG+ + G   ++ + +E+ N  L  L+L  N I 
Sbjct: 532 GADAGAKAVADLLMFNNSIAVLDLRGNGLGNAGAAQIARSLKEHTNDKLTELDLGYNEIK 591

Query: 363 YKGAIPLGQALSKLP 377
            +GA  L QA  + P
Sbjct: 592 DEGACTLAQARPRTP 606



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 13/197 (6%)

Query: 262 LNNNGLGITGCKLLSKAL-HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
           L+ NG+G+ G   ++ AL H+             L+  +   N + +EGA++LA      
Sbjct: 246 LSKNGIGVKGITAVTDALSHND-----------VLQTLVLDTNSIGDEGAEVLAKHLTGD 294

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
            T+ R+ +  N +   G T L++  + N  L  L LN N I Y GA+ L +A+++  SL+
Sbjct: 295 STIRRLNLSGNNVGDKGATLLAEMLKMNTTLTSLELNSNNIDYDGALALAEAITENTSLS 354

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQIN 439
            L+L D  + + GAS +A  L  N +L ++++  NE+  +G   + +A+ + ++ +  ++
Sbjct: 355 ALHLSDNYIGALGASVLANALKKNKSLRELHMKGNELGNEGVRAICEALIERQSPVTSLD 414

Query: 440 VSENQFGEEGVEEMEKL 456
              N   EEG E + ++
Sbjct: 415 FGNNSLTEEGAEAIARV 431



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 42/262 (16%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           R V  DLS N  G  G+  + D L  S    L+ L L+ N +G  G ++L+K L      
Sbjct: 240 RCVAADLSKNGIGVKGITAVTDAL--SHNDVLQTLVLDTNSIGDEGAEVLAKHL------ 291

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
               G     ++ ++G N + ++GA +LA + K   TL  +E+  N I + G  AL++A 
Sbjct: 292 ---TGDSTIRRLNLSGNN-VGDKGATLLAEMLKMNTTLTSLELNSNNIDYDGALALAEAI 347

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL----------------AI-------- 381
            EN +L  L+L+DN I   GA  L  AL K  SL                AI        
Sbjct: 348 TENTSLSALHLSDNYIGALGASVLANALKKNKSLRELHMKGNELGNEGVRAICEALIERQ 407

Query: 382 -----LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
                L+ G+  L   GA +IA+ + D   L+++NL  N+I   G   L KA++  + L 
Sbjct: 408 SPVTSLDFGNNSLTEEGAEAIAR-VADKAHLKELNLYMNDIGDAGIFKLAKALEGDSSLV 466

Query: 437 QINVSENQFGEEGVEEMEKLMK 458
            ++V  N  G +G+  +   ++
Sbjct: 467 SLDVGGNNVGPDGITALAGALR 488



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 184/455 (40%), Gaps = 70/455 (15%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  +  +L+  ++ ++    +   G   +S+ F  N +    +L+ N I  KG   +  A
Sbjct: 203 LNVMIDELRNSQNADLSAKNLGEEGCIFISEGFAFNDRCVAADLSKNGIGVKGITAVTDA 262

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           LS    L  L L    +   GA  +AK+LT ++T+  +NL+ N +  +G   L + +K  
Sbjct: 263 LSHNDVLQTLVLDTNSIGDEGAEVLAKHLTGDSTIRRLNLSGNNVGDKGATLLAEMLKMN 322

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           T L  + ++ N    +G               AL L                     ++A
Sbjct: 323 TTLTSLELNSNNIDYDG---------------ALAL---------------------AEA 346

Query: 182 EGDNSNLS--HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
             +N++LS  H   N+          N+             LK    L EL +  N  G 
Sbjct: 347 ITENTSLSALHLSDNYIGALGASVLANA-------------LKKNKSLRELHMKGNELGN 393

Query: 240 IGVEGLADLL--RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
            GV  + + L  R S   +L+     NN L   G + +++     +           LK 
Sbjct: 394 EGVRAICEALIERQSPVTSLD---FGNNSLTEEGAEAIARVADKAH-----------LKE 439

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
                N + + G   LA   +   +L  +++  N +   GITAL+ A   N  LR L L 
Sbjct: 440 LNLYMNDIGDAGIFKLAKALEGDSSLVSLDVGGNNVGPDGITALAGALRGNDTLRTLELG 499

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS-AGASSIAKYLTDNTTLEDVNLTCNE 416
            N I  KGA+ L   +     +  L +G C + + AGA ++A  L  N ++  ++L  N 
Sbjct: 500 YNPIGDKGALALADVVKYDLKVETLKMGWCHVGADAGAKAVADLLMFNNSIAVLDLRGNG 559

Query: 417 ISVQGGLDLVKAMKNKT--KLKQINVSENQFGEEG 449
           +   G   + +++K  T  KL ++++  N+  +EG
Sbjct: 560 LGNAGAAQIARSLKEHTNDKLTELDLGYNEIKDEG 594



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 115/267 (43%), Gaps = 70/267 (26%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L LSDN  G +G   LA+ L+ +   +L EL +  N LG  G + + +AL +     
Sbjct: 353 LSALHLSDNYIGALGASVLANALKKN--KSLRELHMKGNELGNEGVRAICEALIE----- 405

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLA---------------------AVFKKLKTLE- 324
               SP+    F  G N L  EGA+ +A                      +FK  K LE 
Sbjct: 406 --RQSPVTSLDF--GNNSLTEEGAEAIARVADKAHLKELNLYMNDIGDAGIFKLAKALEG 461

Query: 325 -----RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG--------- 370
                 +++  N +   GITAL+ A   N  LR L L  N I  KGA+ L          
Sbjct: 462 DSSLVSLDVGGNNVGPDGITALAGALRGNDTLRTLELGYNPIGDKGALALADVVKYDLKV 521

Query: 371 ----------------QALSKL----PSLAILNLGDCLLKSAGASSIAKYLTDNTT--LE 408
                           +A++ L     S+A+L+L    L +AGA+ IA+ L ++T   L 
Sbjct: 522 ETLKMGWCHVGADAGAKAVADLLMFNNSIAVLDLRGNGLGNAGAAQIARSLKEHTNDKLT 581

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKL 435
           +++L  NEI  +G   L +A + +T L
Sbjct: 582 ELDLGYNEIKDEGACTLAQA-RPRTPL 607



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 14/231 (6%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
            L+LS N  G  G   LA++L+ +    L  L+LN+N +   G   L++A+ +       
Sbjct: 299 RLNLSGNNVGDKGATLLAEMLKMNTT--LTSLELNSNNIDYDGALALAEAITE------- 349

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
                +L       N +   GA +LA   KK K+L  + M  N + + G+ A+ +A  E 
Sbjct: 350 ---NTSLSALHLSDNYIGALGASVLANALKKNKSLRELHMKGNELGNEGVRAICEALIER 406

Query: 349 KN-LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
           ++ +  L+  +N++T +GA  + +   K   L  LNL    +  AG   +AK L  +++L
Sbjct: 407 QSPVTSLDFGNNSLTEEGAEAIARVADK-AHLKELNLYMNDIGDAGIFKLAKALEGDSSL 465

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             +++  N +   G   L  A++    L+ + +  N  G++G   +  ++K
Sbjct: 466 VSLDVGGNNVGPDGITALAGALRGNDTLRTLELGYNPIGDKGALALADVVK 516



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 68/148 (45%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           + +L+ E  + L  +  +L+  +  ++    +   G   +S+ F  N      +L+ N I
Sbjct: 192 QKQLQKEAVQRLNVMIDELRNSQNADLSAKNLGEEGCIFISEGFAFNDRCVAADLSKNGI 251

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             KG   +  ALS    L  L L    +   GA  +AK+LT ++T+  +NL+ N +  +G
Sbjct: 252 GVKGITAVTDALSHNDVLQTLVLDTNSIGDEGAEVLAKHLTGDSTIRRLNLSGNNVGDKG 311

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEG 449
              L + +K  T L  + ++ N    +G
Sbjct: 312 ATLLAEMLKMNTTLTSLELNSNNIDYDG 339


>gi|320165451|gb|EFW42350.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 460

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 12/236 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK       LDLS+N  G  G   +A+ L+ +    L  L LN N +G  G + +++AL
Sbjct: 43  ALKVNTTATSLDLSENQIGDAGALAIAEALKVNKT--LFWLSLNENQIGEAGAQAIAEAL 100

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + LA      G N++   GA+++A   K  KTL  + +  N I   G  
Sbjct: 101 --------KVNTRLAY--LDLGLNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQ 150

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++D  + N+ +  L+L +N I   GA  + +AL    +L+ L+L    +   GA +IA+
Sbjct: 151 AIADTLKVNETVTSLHLQENQIGDVGAHAIAEALKVNKTLSWLDLDINEIGDVGAHAIAE 210

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            L  NT +  ++L  N+I   G  ++ +A+K  T+L  ++V  N  G  G++  ++
Sbjct: 211 ALKANTAVTALHLEENQIGSTGAQEIAEALKVNTRLAFLDVHLNCIGNAGLQAFDE 266



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 89/170 (52%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GA  +A   K  KTL  + + +N I   G  A+++A + N  L +L+L  N I 
Sbjct: 58  NQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEALKVNTRLAYLDLGLNQIG 117

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL    +L+ L+L D  +  AGA +IA  L  N T+  ++L  N+I   G 
Sbjct: 118 VAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVNETVTSLHLQENQIGDVGA 177

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             + +A+K    L  +++  N+ G+ G   + + +K+     AL LE+++
Sbjct: 178 HAIAEALKVNKTLSWLDLDINEIGDVGAHAIAEALKANTAVTALHLEENQ 227



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%)

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           A+++A   K   T   +++ +N I   G  A+++A + NK L  L+LN+N I   GA  +
Sbjct: 37  AQIIAEALKVNTTATSLDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAI 96

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            +AL     LA L+LG   +  AGA  IA+ L  N TL  ++L  N+I   G   +   +
Sbjct: 97  AEALKVNTRLAYLDLGLNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTL 156

Query: 430 KNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           K    +  +++ ENQ G+ G   + + +K
Sbjct: 157 KVNETVTSLHLQENQIGDVGAHAIAEALK 185



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 75/147 (51%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A   K   T   +++ +N I   G  A+++A + NK L  L+LN+N I   GA  + +
Sbjct: 39  IIAEALKVNTTATSLDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAE 98

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL     LA L+LG   +  AGA  IA+ L  N TL  ++L  N+I   G   +   +K 
Sbjct: 99  ALKVNTRLAYLDLGLNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKV 158

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
              +  +++ ENQ G+ G   + + +K
Sbjct: 159 NETVTSLHLQENQIGDVGAHAIAEALK 185



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 75/144 (52%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A   K  KTL  + +  N I   G  A++D  + N+ +  L+L +N I   GA  + +
Sbjct: 123 IIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVNETVTSLHLQENQIGDVGAHAIAE 182

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L+ L+L    +   GA +IA+ L  NT +  ++L  N+I   G  ++ +A+K 
Sbjct: 183 ALKVNKTLSWLDLDINEIGDVGAHAIAEALKANTAVTALHLEENQIGSTGAQEIAEALKV 242

Query: 121 KTKLKQINVSENQFGEEGVEEMEK 144
            T+L  ++V  N  G  G++  ++
Sbjct: 243 NTRLAFLDVHLNCIGNAGLQAFDE 266



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%)

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++A + N     L+L++N I   GA+ + +AL    +L  L+L +  +  AGA +IA+ 
Sbjct: 40  IAEALKVNTTATSLDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAIAEA 99

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           L  NT L  ++L  N+I V G   + +A+K    L  +++ +NQ G  G + +   +K  
Sbjct: 100 LKVNTRLAYLDLGLNQIGVAGAQIIAEALKVNKTLSSLSLIDNQIGGAGAQAIADTLKVN 159

Query: 461 GMAAALVLEDDE 472
               +L L++++
Sbjct: 160 ETVTSLHLQENQ 171



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 23/212 (10%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           A  IA+ L  NTT   ++L+ N+I   G L + +A+K    L  ++++ENQ GE G + +
Sbjct: 37  AQIIAEALKVNTTATSLDLSENQIGDAGALAIAEALKVNKTLFWLSLNENQIGEAGAQAI 96

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
            + +K     A L L  ++   +  +   E+ + N +      S+LS  D N    A  Q
Sbjct: 97  AEALKVNTRLAYLDLGLNQIGVAGAQIIAEALKVNKT-----LSSLSLID-NQIGGAGAQ 150

Query: 203 SHNNSNQSHNTSNQSHM---------------SLKTGARLVELDLSDNAFGPIGVEGLAD 247
           +  ++ + + T    H+               +LK    L  LDL  N  G +G   +A+
Sbjct: 151 AIADTLKVNETVTSLHLQENQIGDVGAHAIAEALKVNKTLSWLDLDINEIGDVGAHAIAE 210

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            L+++   A+  L L  N +G TG + +++AL
Sbjct: 211 ALKANT--AVTALHLEENQIGSTGAQEIAEAL 240


>gi|407419993|gb|EKF38396.1| hypothetical protein MOQ_001396 [Trypanosoma cruzi marinkellei]
          Length = 696

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 124/239 (51%), Gaps = 21/239 (8%)

Query: 229 ELDLSDNA--FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           E++LSD +     + +  +A+ LRS+   ++  L L  N  G+ G + L +A+       
Sbjct: 37  EVNLSDRSVQLNDVDLGCIAEALRSTA-HSIRVLNLEGNAFGMAGLQALLEAV------- 88

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK----LKTLERVEMPQNGIYHVGITALS 342
             E +P  L+    GRN+L+++ A ++     +    LK L+   + +N I  +G+  ++
Sbjct: 89  --EKNPGILRELRLGRNKLKDQAAVVIGHALSRDGCGLKVLD---LSENDITKLGVIPIA 143

Query: 343 DAF-EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
            A  +++ ++  L+ ++N I    A  LGQA+     L  L+LG   ++ AGA+ +A+ +
Sbjct: 144 AAIGDDSCDVVELSFHNNKIEADAATYLGQAIRHAGKLRHLHLGYNAIRDAGAAQLAQCI 203

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
               +L  ++LT N I   GG +L +A M N   ++++N+  N F  E +E   +++++
Sbjct: 204 PVTVSLSTLDLTANRIGPSGGKELARALMTNSCNIQRLNLRHNLFDSETIEMYAEVIQT 262



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 77/139 (55%), Gaps = 2/139 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ +++ +N I  +G+  ++ A  +++  +  L+ ++N I    A  LGQA+     L  
Sbjct: 124 LKVLDLSENDITKLGVIPIAAAIGDDSCDVVELSFHNNKIEADAATYLGQAIRHAGKLRH 183

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA-MKNKTKLKQINV 129
           L+LG   ++ AGA+ +A+ +    +L  ++LT N I   GG +L +A M N   ++++N+
Sbjct: 184 LHLGYNAIRDAGAAQLAQCIPVTVSLSTLDLTANRIGPSGGKELARALMTNSCNIQRLNL 243

Query: 130 SENQFGEEGVEEMEKLMKS 148
             N F  E +E   +++++
Sbjct: 244 RHNLFDSETIEMYAEVIQT 262


>gi|320165192|gb|EFW42091.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 455

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L LS+N  G    + +A+ L+ +       L L+ N +G  G + +++AL       K  
Sbjct: 19  LYLSENQIGDAEAQIIAEALKVNTTAT--SLDLSENQIGDAGAQAIAEAL-------KVN 69

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            +   L +    +N++ + GA  +A   +  KTL+ + + QN I   G  A+++A + NK
Sbjct: 70  KTLFWLNLH---QNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNK 126

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L  LNL  N I   GA  +   L    ++  L+L D L+  AGA +IA  L  N TL  
Sbjct: 127 TLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALKVNKTLSW 186

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLM 457
           +NL  N+I   G   + +A+K    +K +++SENQ G+ G + + E LM
Sbjct: 187 LNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEALM 235



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 12/234 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK       LDLS+N  G  G + +A+ L+ +    L  L L+ N +G  G   +++AL
Sbjct: 37  ALKVNTTATSLDLSENQIGDAGAQAIAEALKVNKT--LFWLNLHQNQIGDAGAHAIAEAL 94

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 + KE S          +N++ + GA+ +A   K  KTL  + +  N I   G  
Sbjct: 95  R--VNKTLKELS--------LAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQIGDAGAR 144

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+ D  + N+ +  L+L+DN I   GA  +  AL    +L+ LNL D  +  AGA +IA+
Sbjct: 145 AIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDAGAQAIAE 204

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            L  N  ++ ++L+ N+I   G   + +A+    +L  +++  N  G+ G + +
Sbjct: 205 ALKVNKMVKTLSLSENQIGDIGAQAIAEALMVNKQLWWLDLKCNCIGDAGFQAI 258



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 86/170 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GA+ +A   K  KTL  + + QN I   G  A+++A   NK L+ L+L  N I 
Sbjct: 52  NQIGDAGAQAIAEALKVNKTLFWLNLHQNQIGDAGAHAIAEALRVNKTLKELSLAQNQIG 111

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL    +L +LNL    +  AGA +I   L  N T+  ++L  N I   G 
Sbjct: 112 DAGAQAIAEALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGA 171

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             +  A+K    L  +N+ +NQ G+ G + + + +K   M   L L +++
Sbjct: 172 QAIADALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQ 221



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   +  KTL+ + + QN I   G  A+++A + NK L  LNL  N I   GA  +   
Sbjct: 90  IAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQIGDAGARAIVDT 149

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L+L D L+  AGA +IA  L  N TL  +NL  N+I   G   + +A+K  
Sbjct: 150 LKVNETVTSLHLHDNLIGDAGAQAIADALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVN 209

Query: 122 TKLKQINVSENQFGEEGVEEM-EKLM 146
             +K +++SENQ G+ G + + E LM
Sbjct: 210 KMVKTLSLSENQIGDIGAQAIAEALM 235



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 79/160 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + + QN I   G  A+++A   NK L+ L+L  N I   GA  + +A
Sbjct: 62  IAEALKVNKTLFWLNLHQNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEA 121

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L +LNL    +  AGA +I   L  N T+  ++L  N I   G   +  A+K  
Sbjct: 122 LKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADALKVN 181

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             L  +N+ +NQ G+ G + + + +K   M   L L +++
Sbjct: 182 KTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQ 221



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A   K   T   +++ +N I   G  A+++A + NK L  LNL+ N I   GA  + +
Sbjct: 33  IIAEALKVNTTATSLDLSENQIGDAGAQAIAEALKVNKTLFWLNLHQNQIGDAGAHAIAE 92

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  L+L    +  AGA +IA+ L  N TL  +NL  N+I   G   +V  +K 
Sbjct: 93  ALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQIGDAGARAIVDTLKV 152

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
              +  +++ +N  G+ G + +   +K
Sbjct: 153 NETVTSLHLHDNLIGDAGAQAIADALK 179



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 72/141 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I   G  A+ D  + N+ +  L+L+DN I   GA  +  A
Sbjct: 118 IAEALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAIADA 177

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+ LNL D  +  AGA +IA+ L  N  ++ ++L+ N+I   G   + +A+   
Sbjct: 178 LKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEALMVN 237

Query: 122 TKLKQINVSENQFGEEGVEEM 142
            +L  +++  N  G+ G + +
Sbjct: 238 KQLWWLDLKCNCIGDAGFQAI 258



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           +++A + N     L+L++N I   GA  + +AL    +L  LNL    +  AGA +IA+ 
Sbjct: 34  IAEALKVNTTATSLDLSENQIGDAGAQAIAEALKVNKTLFWLNLHQNQIGDAGAHAIAEA 93

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L  N TL++++L  N+I   G   + +A+K    L  +N+  NQ G+ G   +   +K  
Sbjct: 94  LRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIVNQIGDAGARAIVDTLKVN 153

Query: 150 GMAAALVLEDD 160
               +L L D+
Sbjct: 154 ETVTSLHLHDN 164



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 36/214 (16%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L+L  N  G  G   +A+ LR +    L+EL L  N +G  G + +++AL
Sbjct: 65  ALKVNKTLFWLNLHQNQIGDAGAHAIAEALRVNKT--LKELSLAQNQIGDAGAQAIAEAL 122

Query: 280 HDCYESSKKEGSPLALKVFIAGR--------------------------NRLENEGAKML 313
                   K    L L   I  +                          N + + GA+ +
Sbjct: 123 --------KVNKTLTLLNLIVNQIGDAGARAIVDTLKVNETVTSLHLHDNLIGDAGAQAI 174

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K  KTL  + +  N I   G  A+++A + NK ++ L+L++N I   GA  + +AL
Sbjct: 175 ADALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKMVKTLSLSENQIGDIGAQAIAEAL 234

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
                L  L+L    +  AG  +I +    N TL
Sbjct: 235 MVNKQLWWLDLKCNCIGDAGFQAIGEARQVNRTL 268



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 29/241 (12%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L L++N I    A  + +AL    +   L+L +  +  AGA +IA+ L  N TL  +NL 
Sbjct: 19  LYLSENQIGDAEAQIIAEALKVNTTATSLDLSENQIGDAGAQAIAEALKVNKTLFWLNLH 78

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG---VEEMEKLMKSFGMAAALVLED 159
            N+I   G   + +A++    LK++++++NQ G+ G   + E  K+ K+  +   +V   
Sbjct: 79  QNQIGDAGAHAIAEALRVNKTLKELSLAQNQIGDAGAQAIAEALKVNKTLTLLNLIV--- 135

Query: 160 DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM 219
                          +  D+ A      L  N++  S       H + N   +   Q+  
Sbjct: 136 --------------NQIGDAGARAIVDTLKVNETVTS------LHLHDNLIGDAGAQAIA 175

Query: 220 -SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            +LK    L  L+L DN  G  G + +A+ L+ +    ++ L L+ N +G  G + +++A
Sbjct: 176 DALKVNKTLSWLNLIDNQIGDAGAQAIAEALKVNKM--VKTLSLSENQIGDIGAQAIAEA 233

Query: 279 L 279
           L
Sbjct: 234 L 234


>gi|410898359|ref|XP_003962665.1| PREDICTED: uncharacterized protein C14orf166B homolog [Takifugu
           rubripes]
          Length = 633

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 13/210 (6%)

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
           +GV  ++  +R+    AL  + L+++GLG  GCK L+ AL           S + +    
Sbjct: 53  VGVVPVSYFIRN---HALPTMTLSHHGLGPLGCKALAFAL----------VSDMHINTLE 99

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N+++ EGAK L  + +   T+  +++  NG+   G   ++    +N +L+ L L+ N
Sbjct: 100 LADNQIQAEGAKYLLEMLRANFTIHHLDLSNNGLKSAGARYVAQMLLDNVSLKILKLSGN 159

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
             T   A   G ALS    L  L+L     +  G   + + L +N  +E ++L+ N I +
Sbjct: 160 EFTDDDAKYFGDALSITSRLKELDLSHNEFRGKGGEHLGQLLANNEGVEVLDLSWNHIRM 219

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +G +     ++  T LK +++S N FG EG
Sbjct: 220 KGAVAFCAGLRVNTGLKHLDLSWNGFGNEG 249



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 22/231 (9%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD-------- 281
           L+L+DN     G + L ++LR++  F +  L L+NNGL   G + +++ L D        
Sbjct: 98  LELADNQIQAEGAKYLLEMLRAN--FTIHHLDLSNNGLKSAGARYVAQMLLDNVSLKILK 155

Query: 282 ------CYESSKKEGSPLA----LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
                   + +K  G  L+    LK      N    +G + L  +    + +E +++  N
Sbjct: 156 LSGNEFTDDDAKYFGDALSITSRLKELDLSHNEFRGKGGEHLGQLLANNEGVEVLDLSWN 215

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
            I   G  A       N  L+HL+L+ N    +GA+ LG+AL    +L  LNL +  L +
Sbjct: 216 HIRMKGAVAFCAGLRVNTGLKHLDLSWNGFGNEGALALGEALKFNTTLVHLNLNNNRLTN 275

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK--NKTKLKQINV 440
            G   +++ L  N TL+ + L  N ++V+G L L+  +K  ++T L++I++
Sbjct: 276 EGVGMLSRGLEHNDTLQILQLAYNSVTVEGALALLTVVKKASQTALEEIDI 326



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 4/138 (2%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ML A F    T+ H+++  NG+   G   ++    +N  L+ L L+ N  T   A   G 
Sbjct: 116 MLRANF----TIHHLDLSNNGLKSAGARYVAQMLLDNVSLKILKLSGNEFTDDDAKYFGD 171

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           ALS    L  L+L     +  G   + + L +N  +E ++L+ N I ++G +     ++ 
Sbjct: 172 ALSITSRLKELDLSHNEFRGKGGEHLGQLLANNEGVEVLDLSWNHIRMKGAVAFCAGLRV 231

Query: 121 KTKLKQINVSENQFGEEG 138
            T LK +++S N FG EG
Sbjct: 232 NTGLKHLDLSWNGFGNEG 249



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 76/144 (52%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
            + F +   L  + +  +G+  +G  AL+ A   +  +  L L DN I  +GA  L + L
Sbjct: 58  VSYFIRNHALPTMTLSHHGLGPLGCKALAFALVSDMHINTLELADNQIQAEGAKYLLEML 117

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
               ++  L+L +  LKSAGA  +A+ L DN +L+ + L+ NE +         A+   +
Sbjct: 118 RANFTIHHLDLSNNGLKSAGARYVAQMLLDNVSLKILKLSGNEFTDDDAKYFGDALSITS 177

Query: 123 KLKQINVSENQFGEEGVEEMEKLM 146
           +LK++++S N+F  +G E + +L+
Sbjct: 178 RLKELDLSHNEFRGKGGEHLGQLL 201



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +E +++  N I   G  A       N  L+HL+L+ N    +GA+ LG+AL    +L  L
Sbjct: 207 VEVLDLSWNHIRMKGAVAFCAGLRVNTGLKHLDLSWNGFGNEGALALGEALKFNTTLVHL 266

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK--NKTKLKQINV 129
           NL +  L + G   +++ L  N TL+ + L  N ++V+G L L+  +K  ++T L++I++
Sbjct: 267 NLNNNRLTNEGVGMLSRGLEHNDTLQILQLAYNSVTVEGALALLTVVKKASQTALEEIDI 326



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
             DA     +L+ L+L+ N    KG   LGQ L+    + +L+L    ++  GA +    
Sbjct: 169 FGDALSITSRLKELDLSHNEFRGKGGEHLGQLLANNEGVEVLDLSWNHIRMKGAVAFCAG 228

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           L  NT L+ ++L+ N    +G L L +A+K  T L  +N++ N+   EGV
Sbjct: 229 LRVNTGLKHLDLSWNGFGNEGALALGEALKFNTTLVHLNLNNNRLTNEGV 278



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 96/233 (41%), Gaps = 27/233 (11%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L   +RL ELDLS N F   G E L  LL ++    +E L L+ N + + G      A+
Sbjct: 172 ALSITSRLKELDLSHNEFRGKGGEHLGQLLANNE--GVEVLDLSWNHIRMKG------AV 223

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
             C       G    LK      N   NEGA  L    K   TL  + +  N + + G+ 
Sbjct: 224 AFCAGLRVNTG----LKHLDLSWNGFGNEGALALGEALKFNTTLVHLNLNNNRLTNEGVG 279

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            LS   E N  L+ L L  N++T +GA+ L   + K    A+  +  C            
Sbjct: 280 MLSRGLEHNDTLQILQLAYNSVTVEGALALLTVVKKASQTALEEIDIC-----------N 328

Query: 400 YLTDNTTLEDVNLTCNE---ISVQ-GGLDLVKAMKNKTKLKQINVSENQFGEE 448
            L +   +  + LTC E   + VQ GG+    A K   ++  + V ++   E 
Sbjct: 329 VLVNENFMHLLALTCQEHPSLEVQYGGVGGFIAKKPPKRVDPMKVIQDYLDER 381


>gi|320165657|gb|EFW42556.1| hypothetical protein CAOG_07399 [Capsaspora owczarzaki ATCC 30864]
          Length = 362

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 5/170 (2%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NR+ N   + +A   K   TL ++E+  N I H G  A+++A + N  L  L+L+ N I 
Sbjct: 17  NRIGNVEVQAIAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNTTLTRLSLSGNQIG 76

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
           Y GA    QA++ L +L +L+LG   L  +GA +IA+ L  N TL  ++L  N+I   G 
Sbjct: 77  YAGA----QAMA-LTTLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIGTSGA 131

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             + +A+K  T +  + +  NQ G+ G   + + +K   M   L+L  ++
Sbjct: 132 QAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQ 181



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 5/160 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  +E+  N I H G  A+++A + N  L  L+L+ N I Y GA    QA
Sbjct: 27  IAEALKVNTTLTQLELSDNQIGHAGTKAIAEALKVNTTLTRLSLSGNQIGYAGA----QA 82

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           ++ L +L +L+LG   L  +GA +IA+ L  N TL  ++L  N+I   G   + +A+K  
Sbjct: 83  MA-LTTLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIGTSGAQAIAEALKVN 141

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           T +  + +  NQ G+ G   + + +K   M   L+L  ++
Sbjct: 142 TTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQ 181



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 17/227 (7%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
           L  N  G + V+ +A+ L+ +    L +L+L++N +G  G K +++AL        K  +
Sbjct: 14  LDGNRIGNVEVQAIAEALKVNTT--LTQLELSDNQIGHAGTKAIAEAL--------KVNT 63

Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
            L  ++ ++G N++   GA+ +A     L TL  + +  N +   G  A+++A + NK L
Sbjct: 64  TLT-RLSLSG-NQIGYAGAQAMA-----LTTLTVLSLGANQLGDSGALAIAEALKANKTL 116

Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
             L+L  N I   GA  + +AL    ++  L L    +  AGA +IA+ L  NT L+ + 
Sbjct: 117 TALDLQLNQIGTSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEALKVNTMLKGLL 176

Query: 412 LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L  N+I   G   +  A+   T LK   ++ N  G  G + +++  K
Sbjct: 177 LYANQIGDVGAQGIAAALMVNTTLKAFPLAYNCIGHLGSQAIDEARK 223



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 67/139 (48%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           L TL  + +  N +   G  A+++A + NK L  L+L  N I   GA  + +AL    ++
Sbjct: 85  LTTLTVLSLGANQLGDSGALAIAEALKANKTLTALDLQLNQIGTSGAQAIAEALKVNTTV 144

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             L L    +  AGA +IA+ L  NT L+ + L  N+I   G   +  A+   T LK   
Sbjct: 145 TYLGLDGNQIGDAGALAIAEALKVNTMLKGLLLYANQIGDVGAQGIAAALMVNTTLKAFP 204

Query: 129 VSENQFGEEGVEEMEKLMK 147
           ++ N  G  G + +++  K
Sbjct: 205 LAYNCIGHLGSQAIDEARK 223



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  +++  N I   G  A+++A + N  + +L L+ N I   GA+ + +A
Sbjct: 106 IAEALKANKTLTALDLQLNQIGTSGAQAIAEALKVNTTVTYLGLDGNQIGDAGALAIAEA 165

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 106
           L     L  L L    +   GA  IA  L  NTTL+   L  N I
Sbjct: 166 LKVNTMLKGLLLYANQIGDVGAQGIAAALMVNTTLKAFPLAYNCI 210


>gi|449458432|ref|XP_004146951.1| PREDICTED: RAN GTPase-activating protein 1-like [Cucumis sativus]
 gi|449517201|ref|XP_004165634.1| PREDICTED: RAN GTPase-activating protein 1-like [Cucumis sativus]
          Length = 539

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 13/228 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L  LDLS+NA G  GV     LLRS     LEEL L N+G+     +  ++A+ +  
Sbjct: 213 GCDLRYLDLSNNAMGEKGVRAFGLLLRSQK--NLEELYLMNDGI----SEEAARAVRELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S+ K      L++     N   +EGA  ++ + K    LE        +   G  AL++
Sbjct: 267 PSTDK------LRILQFHNNMTGDEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALAE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN    +  + L +++S  P L  + L    L+  GA ++A  L D
Sbjct: 321 AIGTCTRLKKLDLRDNMFGVEAGVALSKSISSFPGLTEIYLSYLNLEDEGAEALANALKD 380

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           +  +LE + +  N+I+ +G + +   +  K  L ++ ++EN+  ++GV
Sbjct: 381 SAPSLEVLEVAGNDITAKGAVSIAACVATKQFLSKLYLAENELKDDGV 428



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 15/214 (7%)

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L +  CF+       N   G+   ++    L     S K   + + L  FIAGR+  E +
Sbjct: 153 LFTKICFS-------NRSFGLDAARVAEPILF----SIKDRLTEVDLSDFIAGRS--EGD 199

Query: 309 GAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
             +++      L+   L  +++  N +   G+ A        KNL  L L ++ I+ + A
Sbjct: 200 ALEVMNIFSAALEGCDLRYLDLSNNAMGEKGVRAFGLLLRSQKNLEELYLMNDGISEEAA 259

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + + +     L IL   + +    GA SI++ +  +  LED   +   +  +GG+ L 
Sbjct: 260 RAVRELIPSTDKLRILQFHNNMTGDEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALA 319

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           +A+   T+LK++++ +N FG E    + K + SF
Sbjct: 320 EAIGTCTRLKKLDLRDNMFGVEAGVALSKSISSF 353



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 7/160 (4%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL++A +++   L  L +  N IT KGA+ +   ++    L+ L L +  LK  G  
Sbjct: 370 GAEALANALKDSAPSLEVLEVAGNDITAKGAVSIAACVATKQFLSKLYLAENELKDDGVI 429

Query: 85  SIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            I K L D +  L +V+ + N I   G   + + +  K   K +N++ N   EEG++E++
Sbjct: 430 LIGKALQDGHGQLSEVDFSTNSIRRAGARFVAQILVQKPGFKLLNINANYISEEGIDEVK 489

Query: 144 KLMK-SFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
           ++ K S  M  +L    DE +   E+ DE++EE  D D E
Sbjct: 490 EIFKNSPNMLGSL----DENDPDGEDYDEDAEENGDHDDE 525



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 67/138 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L ++++  N +   G+ A        K L  L L ++ I+ + A  + + +     L IL
Sbjct: 216 LRYLDLSNNAMGEKGVRAFGLLLRSQKNLEELYLMNDGISEEAARAVRELIPSTDKLRIL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
              + +    GA SI++ +  +  LED   +   +  +GG+ L +A+   T+LK++++ +
Sbjct: 276 QFHNNMTGDEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIGTCTRLKKLDLRD 335

Query: 132 NQFGEEGVEEMEKLMKSF 149
           N FG E    + K + SF
Sbjct: 336 NMFGVEAGVALSKSISSF 353



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ + K    LE        +   G  AL++A     +L+ L+L DN    +  + L ++
Sbjct: 290 ISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIGTCTRLKKLDLRDNMFGVEAGVALSKS 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           +S  P L  + L    L+  GA ++A  L D+  +LE + +  N+I+ +G + +   +  
Sbjct: 350 ISSFPGLTEIYLSYLNLEDEGAEALANALKDSAPSLEVLEVAGNDITAKGAVSIAACVAT 409

Query: 121 KTKLKQINVSENQFGEEGV 139
           K  L ++ ++EN+  ++GV
Sbjct: 410 KQFLSKLYLAENELKDDGV 428



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 16/230 (6%)

Query: 202 QSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK 261
           Q HNN        + S + +K+   L +   S    G  G   LA+ +    C  L++L 
Sbjct: 276 QFHNNMTGDEGAISISEI-VKSSPALEDFRCSSTRVGSEGGVALAEAI--GTCTRLKKLD 332

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK-KL 320
           L +N  G+     LSK++            P   +++++  N LE+EGA+ LA   K   
Sbjct: 333 LRDNMFGVEAGVALSKSISSF---------PGLTEIYLSYLN-LEDEGAEALANALKDSA 382

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK-LPSL 379
            +LE +E+  N I   G  +++      + L  L L +N +   G I +G+AL      L
Sbjct: 383 PSLEVLEVAGNDITAKGAVSIAACVATKQFLSKLYLAENELKDDGVILIGKALQDGHGQL 442

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
           + ++     ++ AGA  +A+ L      + +N+  N IS + G+D VK +
Sbjct: 443 SEVDFSTNSIRRAGARFVAQILVQKPGFKLLNINANYIS-EEGIDEVKEI 491



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 70/156 (44%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N +  +G +    + +  K LE + +  +GI      A+ +       LR L  ++N   
Sbjct: 224 NAMGEKGVRAFGLLLRSQKNLEELYLMNDGISEEAARAVRELIPSTDKLRILQFHNNMTG 283

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GAI + + +   P+L         + S G  ++A+ +   T L+ ++L  N   V+ G
Sbjct: 284 DEGAISISEIVKSSPALEDFRCSSTRVGSEGGVALAEAIGTCTRLKKLDLRDNMFGVEAG 343

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L K++ +   L +I +S     +EG E +   +K
Sbjct: 344 VALSKSISSFPGLTEIYLSYLNLEDEGAEALANALK 379



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 66/143 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + +  K LE + +  +GI      A+ +      KLR L  ++N    +GAI + + +  
Sbjct: 237 LLRSQKNLEELYLMNDGISEEAARAVRELIPSTDKLRILQFHNNMTGDEGAISISEIVKS 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P+L         + S G  ++A+ +   T L+ ++L  N   V+ G+ L K++ +   L
Sbjct: 297 SPALEDFRCSSTRVGSEGGVALAEAIGTCTRLKKLDLRDNMFGVEAGVALSKSISSFPGL 356

Query: 125 KQINVSENQFGEEGVEEMEKLMK 147
            +I +S     +EG E +   +K
Sbjct: 357 TEIYLSYLNLEDEGAEALANALK 379


>gi|413952546|gb|AFW85195.1| hypothetical protein ZEAMMB73_319583 [Zea mays]
          Length = 615

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 165/351 (47%), Gaps = 35/351 (9%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  ALS+  ++NK +R L  ++N I Y G   + +AL +  ++  L L        GA S
Sbjct: 280 GAKALSNMLKKNKSIRILQFSNNAIEYSGFASIAEALLENNTIRSLYLNGNYGGPLGACS 339

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEK 144
           +A+ +  N +L +++L  N I  +G  +L+ A+  +K K+  +++  N    EG+  + +
Sbjct: 340 LAQGILGNKSLREIHLHGNGIGNEGIRELMSALSAHKGKITVVDIGNNNISPEGLHPVAE 399

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSH 204
            +K         L  +  + SDE  ++ +E      A  DN  +S  D            
Sbjct: 400 FLKRTKSLQWFSLYMN--DISDEGAEKVAE------ALKDNKTISTIDLG---------- 441

Query: 205 NNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
            N+  S   S  +  +LK  A L  LDLS N  G  GV+ L D+L+      ++ LKL  
Sbjct: 442 GNNIHSKAVSAVAE-TLKDNAVLTTLDLSYNPIGSDGVKALCDVLKFHG--KIQTLKLGW 498

Query: 265 NGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTL 323
             +G+ G + ++    DC + +    S L L+      N L N+GA  LA  FK + ++L
Sbjct: 499 CQIGMEGAECIA----DCLKYNTTL-STLDLRA-----NGLGNDGAICLARSFKIINESL 548

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNL--RHLNLNDNTITYKGAIPLGQA 372
             +++  N I   G  AL+ A + N++L    LNL +N  T  G + L +A
Sbjct: 549 TSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLANNFFTKFGQVALSEA 599



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 187/427 (43%), Gaps = 51/427 (11%)

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           L +   +L +L  +N+        G   +A+ L  + + E+V+ + N I+  G       
Sbjct: 172 LNKFYKELRTLKTVNMAGRQFGDEGLFFLAESLAYDKSAEEVDFSGNGITAVGIEAFDGV 231

Query: 118 MKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEE 176
           ++  T LK +N+S N  G+EG + + + L+++ G+   L+   + G              
Sbjct: 232 LQINTTLKTLNLSGNDIGDEGAKCLSDILVENVGIQKLLLNSINIG-------------- 277

Query: 177 NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
            D  A+  ++ L  N S        Q  NN+ +    ++ +   L+    +  L L+ N 
Sbjct: 278 -DEGAKALSNMLKKNKSIRIL----QFSNNAIEYSGFASIAEALLENNT-IRSLYLNGNY 331

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL----------------- 279
            GP+G   LA  +  +   +L E+ L+ NG+G  G + L  AL                 
Sbjct: 332 GGPLGACSLAQGILGNK--SLREIHLHGNGIGNEGIRELMSALSAHKGKITVVDIGNNNI 389

Query: 280 -----HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
                H   E  K+  S   L+ F    N + +EGA+ +A   K  KT+  +++  N I+
Sbjct: 390 SPEGLHPVAEFLKRTKS---LQWFSLYMNDISDEGAEKVAEALKDNKTISTIDLGGNNIH 446

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
              ++A+++  ++N  L  L+L+ N I   G   L   L     +  L LG C +   GA
Sbjct: 447 SKAVSAVAETLKDNAVLTTLDLSYNPIGSDGVKALCDVLKFHGKIQTLKLGWCQIGMEGA 506

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK--NKTKLKQINVSENQFGEEGVEE 452
             IA  L  NTTL  ++L  N +   G + L ++ K  N++ L  +++  N+  ++G   
Sbjct: 507 ECIADCLKYNTTLSTLDLRANGLGNDGAICLARSFKIINES-LTSLDLGFNEIRDDGAFA 565

Query: 453 MEKLMKS 459
           + + +K+
Sbjct: 566 LAQALKA 572



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 67/133 (50%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V++  N I   G+  +++  +  K L+  +L  N I+ +GA  + +AL    +++ ++LG
Sbjct: 382 VDIGNNNISPEGLHPVAEFLKRTKSLQWFSLYMNDISDEGAEKVAEALKDNKTISTIDLG 441

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              + S   S++A+ L DN  L  ++L+ N I   G   L   +K   K++ + +   Q 
Sbjct: 442 GNNIHSKAVSAVAETLKDNAVLTTLDLSYNPIGSDGVKALCDVLKFHGKIQTLKLGWCQI 501

Query: 135 GEEGVEEMEKLMK 147
           G EG E +   +K
Sbjct: 502 GMEGAECIADCLK 514



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 3/149 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KT+  +++  N I+   ++A+++  ++N  L  L+L+ N I   G   L   
Sbjct: 425 VAEALKDNKTISTIDLGGNNIHSKAVSAVAETLKDNAVLTTLDLSYNPIGSDGVKALCDV 484

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-- 119
           L     +  L LG C +   GA  IA  L  NTTL  ++L  N +   G + L ++ K  
Sbjct: 485 LKFHGKIQTLKLGWCQIGMEGAECIADCLKYNTTLSTLDLRANGLGNDGAICLARSFKII 544

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           N++ L  +++  N+  ++G   + + +K+
Sbjct: 545 NES-LTSLDLGFNEIRDDGAFALAQALKA 572


>gi|291227715|ref|XP_002733824.1| PREDICTED: nucleotide-binding oligomerization domain containing
           1-like [Saccoglossus kowalevskii]
          Length = 418

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 120/244 (49%), Gaps = 15/244 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK  A +  +DL  N  G  G E +A LL  +    L  + L  N +G  G K+++KA 
Sbjct: 78  TLKNNAYIHSMDLRYNNIGDTGAEYIAKLLEETV--VLRSVNLMCNDIGEAGAKVIAKAF 135

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  +   + ++LK+     N++ N+G    A V +   TLE +++         + 
Sbjct: 136 -------QTNETLVSLKL---NGNKIGNKGGMAFAGVLQVNNTLEELDLGDTDQGTESVI 185

Query: 340 ALSDAFEENKNLRHLNLNDNTI---TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           AL+    +NK++R LN+N   +     +  + + + L    +L  L+L  C ++  GA  
Sbjct: 186 ALATVLNQNKSIRALNVNRPLLFSHQEETTVHMARMLKVTSTLQELHLQKCDIRDFGAER 245

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           ++  L DN++L+ ++++CN I+  G   L K +K+ T L+ +++  N+  ++G + +   
Sbjct: 246 LSDALIDNSSLKYLDVSCNRITRDGAKHLSKLLKHNTPLQILDLGFNRIEDDGAKHLADA 305

Query: 457 MKSF 460
           +  F
Sbjct: 306 LGQF 309



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 34/303 (11%)

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           N+GD      GA  IAK L +   L  VNL CN+I   G   + KA +    L  + ++ 
Sbjct: 94  NIGD-----TGAEYIAKLLEETVVLRSVNLMCNDIGEAGAKVIAKAFQTNETLVSLKLNG 148

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           N+ G +G           GMA A VL+ +    + EE D    ++         + L+ N
Sbjct: 149 NKIGNKG-----------GMAFAGVLQVNN---TLEELDLGDTDQGTESVIALATVLNQN 194

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
            S  + N  N+    S+Q   T + + M LK  + L EL L        G E L+D L  
Sbjct: 195 KSIRALNV-NRPLLFSHQEETTVHMARM-LKVTSTLQELHLQKCDIRDFGAERLSDALID 252

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           +   +L+ L ++ N +   G K LSK L        K  +P  L++   G NR+E++GAK
Sbjct: 253 NS--SLKYLDVSCNRITRDGAKHLSKLL--------KHNTP--LQILDLGFNRIEDDGAK 300

Query: 312 MLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
            LA    +  T L  + +  N I   G+ A++ A + N +L ++ +  N +     +   
Sbjct: 301 HLADALGQFNTCLTHLVITTNQIKGPGVCAIAKAMKLNISLNNVYIWGNNLETPACVAFN 360

Query: 371 QAL 373
           + +
Sbjct: 361 ELI 363



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 10/225 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           + +T   LV L L+ N  G  G    A +L+ +    LEEL L +   G      L+  L
Sbjct: 134 AFQTNETLVSLKLNGNKIGNKGGMAFAGVLQVNN--TLEELDLGDTDQGTESVIALATVL 191

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
           +       +  S  AL V        + E    +A + K   TL+ + + +  I   G  
Sbjct: 192 N-------QNKSIRALNVNRPLLFSHQEETTVHMARMLKVTSTLQELHLQKCDIRDFGAE 244

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            LSDA  +N +L++L+++ N IT  GA  L + L     L IL+LG   ++  GA  +A 
Sbjct: 245 RLSDALIDNSSLKYLDVSCNRITRDGAKHLSKLLKHNTPLQILDLGFNRIEDDGAKHLAD 304

Query: 400 YLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
            L   NT L  + +T N+I   G   + KAMK    L  + +  N
Sbjct: 305 ALGQFNTCLTHLVITTNQIKGPGVCAIAKAMKLNISLNNVYIWGN 349



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 76/151 (50%), Gaps = 3/151 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTI---TYKGAIPL 58
            A V +   TLE +++         + AL+    +NK +R LN+N   +     +  + +
Sbjct: 159 FAGVLQVNNTLEELDLGDTDQGTESVIALATVLNQNKSIRALNVNRPLLFSHQEETTVHM 218

Query: 59  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
            + L    +L  L+L  C ++  GA  ++  L DN++L+ ++++CN I+  G   L K +
Sbjct: 219 ARMLKVTSTLQELHLQKCDIRDFGAERLSDALIDNSSLKYLDVSCNRITRDGAKHLSKLL 278

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           K+ T L+ +++  N+  ++G + +   +  F
Sbjct: 279 KHNTPLQILDLGFNRIEDDGAKHLADALGQF 309



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 1/132 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K   TL+ + + +  I   G   LSDA  +N  L++L+++ N IT  GA  L + 
Sbjct: 218 MARMLKVTSTLQELHLQKCDIRDFGAERLSDALIDNSSLKYLDVSCNRITRDGAKHLSKL 277

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L     L IL+LG   ++  GA  +A  L   NT L  + +T N+I   G   + KAMK 
Sbjct: 278 LKHNTPLQILDLGFNRIEDDGAKHLADALGQFNTCLTHLVITTNQIKGPGVCAIAKAMKL 337

Query: 121 KTKLKQINVSEN 132
              L  + +  N
Sbjct: 338 NISLNNVYIWGN 349



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 34/231 (14%)

Query: 259 ELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
           +L L  N   IT  +L    +   YE+ K      ++ +     N + + GA+ +A + +
Sbjct: 52  DLVLPGNNHLITNIRLTDDDMRPLYETLKNNAYIHSMDL---RYNNIGDTGAEYIAKLLE 108

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG------------- 365
           +   L  V +  N I   G   ++ AF+ N+ L  L LN N I  KG             
Sbjct: 109 ETVVLRSVNLMCNDIGEAGAKVIAKAFQTNETLVSLKLNGNKIGNKGGMAFAGVLQVNNT 168

Query: 366 ---------------AIPLGQALSKLPSLAILNLGDCLLKSAGASS---IAKYLTDNTTL 407
                           I L   L++  S+  LN+   LL S    +   +A+ L   +TL
Sbjct: 169 LEELDLGDTDQGTESVIALATVLNQNKSIRALNVNRPLLFSHQEETTVHMARMLKVTSTL 228

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           ++++L   +I   G   L  A+ + + LK ++VS N+   +G + + KL+K
Sbjct: 229 QELHLQKCDIRDFGAERLSDALIDNSSLKYLDVSCNRITRDGAKHLSKLLK 279



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 31/177 (17%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKG------- 54
           +A + ++   L  V +  N I   G   ++ AF+ N+ L  L LN N I  KG       
Sbjct: 103 IAKLLEETVVLRSVNLMCNDIGEAGAKVIAKAFQTNETLVSLKLNGNKIGNKGGMAFAGV 162

Query: 55  ---------------------AIPLGQALSKLPSLAILNLGDCLLKSAGASS---IAKYL 90
                                 I L   L++  S+  LN+   LL S    +   +A+ L
Sbjct: 163 LQVNNTLEELDLGDTDQGTESVIALATVLNQNKSIRALNVNRPLLFSHQEETTVHMARML 222

Query: 91  TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
              +TL++++L   +I   G   L  A+ + + LK ++VS N+   +G + + KL+K
Sbjct: 223 KVTSTLQELHLQKCDIRDFGAERLSDALIDNSSLKYLDVSCNRITRDGAKHLSKLLK 279


>gi|410684076|ref|YP_006060083.1| leucine-rich-repeat type III effector protein (GALA1-like)
           [Ralstonia solanacearum CMR15]
 gi|299068565|emb|CBJ39793.1| leucine-rich-repeat type III effector protein (GALA1-like)
           [Ralstonia solanacearum CMR15]
          Length = 555

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 175/438 (39%), Gaps = 105/438 (23%)

Query: 27  ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 86
           ITA   A      L  LN+ +N I  +GA    + L+  P+L  LN+    +  AGA ++
Sbjct: 168 ITAAGIAHLSELPLAELNVRNNWIGDEGA----RLLAAHPTLTTLNVASNGIGDAGAQAL 223

Query: 87  AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
           A     NT LE ++++ NEI    G D V+A+ +   LK +N+S N  G+ G        
Sbjct: 224 AA----NTRLESLDISFNEI----GSDGVQALADNATLKTLNISSNDIGDAG-------- 267

Query: 147 KSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNN 206
            +  +A    L +    C                             N   +A  Q+  N
Sbjct: 268 -ALALAVNTTLTELNTSC-----------------------------NRISDAGAQALAN 297

Query: 207 SNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNG 266
           S+                  L  LD+SDN FG  GV+ +A   R      L  L ++ N 
Sbjct: 298 SDS-----------------LTSLDISDNGFGDAGVQAIAANTR------LRRLDISRNR 334

Query: 267 LGITGC-------KLLSKALHDCYESSKKEGSPLALKVFI----AGRNRLENEGAKMLAA 315
           L   G         L    + DC E        LA    +    AG N +  EGA+ LA 
Sbjct: 335 LSEAGVLAVAANTTLTKLCIADC-EIGTAGAQALAANTRLVSLDAGHNGIGTEGAQALA- 392

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
              +  TL+++ + +N I   G      AF +N  LR LNL    +T  G     + L+ 
Sbjct: 393 ---RHATLKQLNLEKNPIGDAGAV----AFADNATLRSLNLKGCKVTDSGL----RVLAT 441

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L  LN+ D  + + GA + A     N+TL  ++++ N I  +G L    A+   T L
Sbjct: 442 NATLRTLNVSDNRITAEGAKATAA----NSTLTSLDVSHNGIEDEGAL----ALAANTVL 493

Query: 436 KQINVSENQFGEEGVEEM 453
             +N+  N    +GV  +
Sbjct: 494 NVLNICYNALTVKGVTAL 511



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 149/388 (38%), Gaps = 109/388 (28%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE +++  N I   G+ AL+D    N  L+ LN++ N I   GA+          +LA+ 
Sbjct: 229 LESLDISFNEIGSDGVQALAD----NATLKTLNISSNDIGDAGAL----------ALAV- 273

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                                NTTL ++N +CN IS  G     +A+ N   L  +++S+
Sbjct: 274 ---------------------NTTLTELNTSCNRISDAGA----QALANSDSLTSLDISD 308

Query: 132 NQFGEEGVEEME-------------KLMKSFGMAAALVLEDDEGECSDEEQDEESEEEND 178
           N FG+ GV+ +              +L ++  +A A      +   +D E      +   
Sbjct: 309 NGFGDAGVQAIAANTRLRRLDISRNRLSEAGVLAVAANTTLTKLCIADCEIGTAGAQ--- 365

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
             A   N+ L   D+ H               +    +   +L   A L +L+L  N  G
Sbjct: 366 --ALAANTRLVSLDAGH---------------NGIGTEGAQALARHATLKQLNLEKNPIG 408

Query: 239 PIGVEGLAD--LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
             G    AD   LRS               L + GCK+    L     ++        L+
Sbjct: 409 DAGAVAFADNATLRS---------------LNLKGCKVTDSGLRVLATNAT-------LR 446

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
                 NR+  EGAK  AA      TL  +++  NGI   G  AL+     N  L  LN+
Sbjct: 447 TLNVSDNRITAEGAKATAAN----STLTSLDVSHNGIEDEGALALA----ANTVLNVLNI 498

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNL 384
             N +T KG      AL+   +LA+L++
Sbjct: 499 CYNALTVKGVT----ALAASTTLAVLDI 522


>gi|183178960|gb|ACC43968.1| FBox-LRR protein [Philodina roseola]
          Length = 594

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 12/251 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L+ LDL  N     G + LAD L+ +    L  LKL +N +G  G K L+ AL
Sbjct: 214 ALKVNQTLMTLDLYANRIDREGAKYLADSLKVNSV--LSTLKLYSNSIGAEGMKYLADAL 271

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      +  AL     G N+L +EG K LA   K  +TL  + + QN +      
Sbjct: 272 K----------TNRALATLTLGSNKLGDEGVKYLADALKCNQTLNTLVLYQNNLGAEAAK 321

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            LSDA   N+ L +L LN N +  +GA  L  AL    +L  L L +  L++ G   +A 
Sbjct: 322 YLSDALMSNQTLTNLELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRAEGMKYLAV 381

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  N  L  + +  N +S +    L  A+K    L  +++  +  G EG +++   +K 
Sbjct: 382 SLMSNQGLTRLEVGRNHLSPEAAKYLSDALKINQTLDTLHLDFSSIGVEGAKDLSNALKV 441

Query: 460 FGMAAALVLED 470
                 L+L +
Sbjct: 442 NQTLHTLILHN 452



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 179/451 (39%), Gaps = 39/451 (8%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G   L+D+ + N  L  L LN N    +G   L  AL    +L  + L +  + +  A  
Sbjct: 95  GAKYLADSLKINSTLNKLRLNHNDFGAEGTKYLFNALKINQTLKTIRLSENHVNADAAQC 154

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +A  L  N TL  + L    ++      L  A+K    L  +++  N+ G EGV+ +   
Sbjct: 155 LADVLLSNQTLNTLELYYCYLNATVFKYLATALKVNRTLTSLDLGLNEQGNEGVKYLADA 214

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
           +K   +   L+  D      D E  +       +D+   NS LS          + + ++
Sbjct: 215 LK---VNQTLMTLDLYANRIDREGAKYL-----ADSLKVNSVLS----------TLKLYS 256

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
           NS  +      +  +LKT   L  L L  N  G  GV+ LAD L+  C   L  L L  N
Sbjct: 257 NSIGAEGMKYLAD-ALKTNRALATLTLGSNKLGDEGVKYLADALK--CNQTLNTLVLYQN 313

Query: 266 GLGITGCKLLSKALHDCY--------------ESSKKEGSPLA----LKVFIAGRNRLEN 307
            LG    K LS AL                  E +K     L     LK       RL  
Sbjct: 314 NLGAEAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHLADALVNNRTLKTLKLNEIRLRA 373

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           EG K LA      + L R+E+ +N +       LSDA + N+ L  L+L+ ++I  +GA 
Sbjct: 374 EGMKYLAVSLMSNQGLTRLEVGRNHLSPEAAKYLSDALKINQTLDTLHLDFSSIGVEGAK 433

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
            L  AL    +L  L L +  L        A  L  N TL  ++L  N+  V+G   L +
Sbjct: 434 DLSNALKVNQTLHTLILHNSHLGVEEMKYFADALKTNQTLRSLDLNDNKAGVEGAKYLAE 493

Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           A+     L  + +  N  G EG       +K
Sbjct: 494 ALIKNKNLTSLELKMNDIGVEGARYFANALK 524



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 12/253 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SLK  + L  L L  N+ G  G++ LAD L+++   AL  L L +N LG  G K L+ AL
Sbjct: 242 SLKVNSVLSTLKLYSNSIGAEGMKYLADALKTN--RALATLTLGSNKLGDEGVKYLADAL 299

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
             C ++         L   +  +N L  E AK L+      +TL  +E+  N + + G  
Sbjct: 300 -KCNQT---------LNTLVLYQNNLGAEAAKYLSDALMSNQTLTNLELNGNMLGNEGAK 349

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            L+DA   N+ L+ L LN+  +  +G   L  +L     L  L +G   L    A  ++ 
Sbjct: 350 HLADALVNNRTLKTLKLNEIRLRAEGMKYLAVSLMSNQGLTRLEVGRNHLSPEAAKYLSD 409

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  N TL+ ++L  + I V+G  DL  A+K    L  + +  +  G E ++     +K+
Sbjct: 410 ALKINQTLDTLHLDFSSIGVEGAKDLSNALKVNQTLHTLILHNSHLGVEEMKYFADALKT 469

Query: 460 FGMAAALVLEDDE 472
                +L L D++
Sbjct: 470 NQTLRSLDLNDNK 482



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 175/444 (39%), Gaps = 59/444 (13%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V    +TL  +E+    +       L+ A + N+ L  L+L  N    +G   L  A
Sbjct: 155 LADVLLSNQTLNTLELYYCYLNATVFKYLATALKVNRTLTSLDLGLNEQGNEGVKYLADA 214

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L    +   GA  +A  L  N+ L  + L  N I  +G   L  A+K  
Sbjct: 215 LKVNQTLMTLDLYANRIDREGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTN 274

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L  + +  N+ G+EGV+ +   +K       LVL  +                     
Sbjct: 275 RALATLTLGSNKLGDEGVKYLADALKCNQTLNTLVLYQN--------------------- 313

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
                NL    + +  +A              SNQ+         L  L+L+ N  G  G
Sbjct: 314 -----NLGAEAAKYLSDAL------------MSNQT---------LTNLELNGNMLGNEG 347

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
            + LAD L ++    L+ LKLN   L   G K L+ +L      ++ E           G
Sbjct: 348 AKHLADALVNNRT--LKTLKLNEIRLRAEGMKYLAVSLMSNQGLTRLE----------VG 395

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           RN L  E AK L+   K  +TL+ + +  + I   G   LS+A + N+ L  L L+++ +
Sbjct: 396 RNHLSPEAAKYLSDALKINQTLDTLHLDFSSIGVEGAKDLSNALKVNQTLHTLILHNSHL 455

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +       AL    +L  L+L D      GA  +A+ L  N  L  + L  N+I V+G
Sbjct: 456 GVEEMKYFADALKTNQTLRSLDLNDNKAGVEGAKYLAEALIKNKNLTSLELKMNDIGVEG 515

Query: 422 GLDLVKAMKNKTKLKQINVSENQF 445
                 A+K    L  +N+  N  
Sbjct: 516 ARYFANALKINQTLHILNLYGNHL 539



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 139/359 (38%), Gaps = 59/359 (16%)

Query: 95  TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 154
           TL +++L   EIS Q  L+LV A+KN   L  + +     G +G + +   +K       
Sbjct: 52  TLNNLDLQFYEISSQAALNLVDALKNNRTLTTLGLGLVTLGAQGAKYLADSLKINSTLNK 111

Query: 155 LVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTS 214
           L L                   ND  AEG         + +  NA               
Sbjct: 112 LRLN-----------------HNDFGAEG---------TKYLFNA--------------- 130

Query: 215 NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
                 LK    L  + LS+N       + LAD+L S+    L  L+L    L  T  K 
Sbjct: 131 ------LKINQTLKTIRLSENHVNADAAQCLADVLLSNQT--LNTLELYYCYLNATVFKY 182

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           L+ AL       K   +  +L +   G N   NEG K LA   K  +TL  +++  N I 
Sbjct: 183 LATAL-------KVNRTLTSLDL---GLNEQGNEGVKYLADALKVNQTLMTLDLYANRID 232

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
             G   L+D+ + N  L  L L  N+I  +G   L  AL    +LA L LG   L   G 
Sbjct: 233 REGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTNRALATLTLGSNKLGDEGV 292

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             +A  L  N TL  + L  N +  +    L  A+ +   L  + ++ N  G EG + +
Sbjct: 293 KYLADALKCNQTLNTLVLYQNNLGAEAAKYLSDALMSNQTLTNLELNGNMLGNEGAKHL 351



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 17/272 (6%)

Query: 202 QSHNNSN-QSHNTSNQSHM----SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
           Q+ NN + Q +  S+Q+ +    +LK    L  L L     G  G + LAD L+ +    
Sbjct: 51  QTLNNLDLQFYEISSQAALNLVDALKNNRTLTTLGLGLVTLGAQGAKYLADSLKINST-- 108

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L +L+LN+N  G  G K L  AL               LK      N +  + A+ LA V
Sbjct: 109 LNKLRLNHNDFGAEGTKYLFNALK----------INQTLKTIRLSENHVNADAAQCLADV 158

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
               +TL  +E+    +       L+ A + N+ L  L+L  N    +G   L  AL   
Sbjct: 159 LLSNQTLNTLELYYCYLNATVFKYLATALKVNRTLTSLDLGLNEQGNEGVKYLADALKVN 218

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            +L  L+L    +   GA  +A  L  N+ L  + L  N I  +G   L  A+K    L 
Sbjct: 219 QTLMTLDLYANRIDREGAKYLADSLKVNSVLSTLKLYSNSIGAEGMKYLADALKTNRALA 278

Query: 437 QINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
            + +  N+ G+EGV+ +   +K       LVL
Sbjct: 279 TLTLGSNKLGDEGVKYLADALKCNQTLNTLVL 310



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 4/143 (2%)

Query: 10  KTLEHVEMPQ--NGIYHV--GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           + L+H+   Q     Y+V     ++ D ++  + L +L+L    I+ + A+ L  AL   
Sbjct: 19  RILDHLRTYQIIASAYNVCARWNSIIDTYQPYQTLNNLDLQFYEISSQAALNLVDALKNN 78

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            +L  L LG   L + GA  +A  L  N+TL  + L  N+   +G   L  A+K    LK
Sbjct: 79  RTLTTLGLGLVTLGAQGAKYLADSLKINSTLNKLRLNHNDFGAEGTKYLFNALKINQTLK 138

Query: 126 QINVSENQFGEEGVEEMEKLMKS 148
            I +SEN    +  + +  ++ S
Sbjct: 139 TIRLSENHVNADAAQCLADVLLS 161



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%)

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           ++ D ++  + L +L+L    I+ + A+ L  AL    +L  L LG   L + GA  +A 
Sbjct: 42  SIIDTYQPYQTLNNLDLQFYEISSQAALNLVDALKNNRTLTTLGLGLVTLGAQGAKYLAD 101

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  N+TL  + L  N+   +G   L  A+K    LK I +SEN    +  + +  ++ S
Sbjct: 102 SLKINSTLNKLRLNHNDFGAEGTKYLFNALKINQTLKTIRLSENHVNADAAQCLADVLLS 161


>gi|428171629|gb|EKX40544.1| hypothetical protein GUITHDRAFT_60048, partial [Guillardia theta
           CCMP2712]
          Length = 218

 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 79/147 (53%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++  EG + L+ + + L  LE + +  N +   G+T L+DA    + L+ L L  N I 
Sbjct: 25  NKIGAEGCRHLSDILRHLVNLEFLSVFNNQVCDAGLTLLTDALHHVRGLKTLELGGNNIR 84

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  LG+ L+  P+L  L +G   + + GA+S+ + L  NT LE + +  N I  +G 
Sbjct: 85  KDGAQRLGEYLACKPTLVSLEMGCNHVGNEGATSLGRALALNTRLEHLRICNNNIGSEGC 144

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEG 449
             L ++MK+   L+ + +  N+ G+EG
Sbjct: 145 FFLARSMKSTPNLEALYLGFNEIGDEG 171



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 73/137 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+ + + L  LE + +  N +   G+T L+DA    + L+ L L  N I   GA  LG+ 
Sbjct: 35  LSDILRHLVNLEFLSVFNNQVCDAGLTLLTDALHHVRGLKTLELGGNNIRKDGAQRLGEY 94

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+  P+L  L +G   + + GA+S+ + L  NT LE + +  N I  +G   L ++MK+ 
Sbjct: 95  LACKPTLVSLEMGCNHVGNEGATSLGRALALNTRLEHLRICNNNIGSEGCFFLARSMKST 154

Query: 122 TKLKQINVSENQFGEEG 138
             L+ + +  N+ G+EG
Sbjct: 155 PNLEALYLGFNEIGDEG 171



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 12/214 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LV LD+  N  G  G   L+D+LR      LE L + NN +   G  LL+ ALH      
Sbjct: 17  LVHLDVRGNKIGAEGCRHLSDILRHL--VNLEFLSVFNNQVCDAGLTLLTDALHHVR--- 71

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
                   LK    G N +  +GA+ L        TL  +EM  N + + G T+L  A  
Sbjct: 72  -------GLKTLELGGNNIRKDGAQRLGEYLACKPTLVSLEMGCNHVGNEGATSLGRALA 124

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N  L HL + +N I  +G   L +++   P+L  L LG   +   GA  +A+       
Sbjct: 125 LNTRLEHLRICNNNIGSEGCFFLARSMKSTPNLEALYLGFNEIGDEGAGHVAECFVCLPR 184

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
           L  V+L  N I  +G   + + +++   L+Q+ +
Sbjct: 185 LRHVDLYNNGIGQEGVTRIARNLRHLRHLEQLRL 218



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 75/165 (45%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           EG   +  VF  + +L  +++  N I   G   LSD      NL  L++ +N +   G  
Sbjct: 2   EGIMYIREVFPYMPSLVHLDVRGNKIGAEGCRHLSDILRHLVNLEFLSVFNNQVCDAGLT 61

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
            L  AL  +  L  L LG   ++  GA  + +YL    TL  + + CN +  +G   L +
Sbjct: 62  LLTDALHHVRGLKTLELGGNNIRKDGAQRLGEYLACKPTLVSLEMGCNHVGNEGATSLGR 121

Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           A+   T+L+ + +  N  G EG   + + MKS     AL L  +E
Sbjct: 122 ALALNTRLEHLRICNNNIGSEGCFFLARSMKSTPNLEALYLGFNE 166



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           VF  + +L H+++  N I   G   LSD       L  L++ +N +   G   L  AL  
Sbjct: 10  VFPYMPSLVHLDVRGNKIGAEGCRHLSDILRHLVNLEFLSVFNNQVCDAGLTLLTDALHH 69

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
           +  L  L LG   ++  GA  + +YL    TL  + + CN +  +G   L +A+   T+L
Sbjct: 70  VRGLKTLELGGNNIRKDGAQRLGEYLACKPTLVSLEMGCNHVGNEGATSLGRALALNTRL 129

Query: 125 KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           + + +  N  G EG   + + MKS     AL L  +E
Sbjct: 130 EHLRICNNNIGSEGCFFLARSMKSTPNLEALYLGFNE 166



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 58/119 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +EM  N + + G T+L  A   N +L HL + +N I  +G   L +++   P+L  
Sbjct: 100 TLVSLEMGCNHVGNEGATSLGRALALNTRLEHLRICNNNIGSEGCFFLARSMKSTPNLEA 159

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           L LG   +   GA  +A+       L  V+L  N I  +G   + + +++   L+Q+ +
Sbjct: 160 LYLGFNEIGDEGAGHVAECFVCLPRLRHVDLYNNGIGQEGVTRIARNLRHLRHLEQLRL 218


>gi|145509565|ref|XP_001440721.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407949|emb|CAK73324.1| unnamed protein product [Paramecium tetraurelia]
          Length = 348

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 16/218 (7%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  ++ LDLS+NA  P G E L   L+ +    L++L LNN GLGI G   +S+ L    
Sbjct: 92  GLNILSLDLSNNAVNPFGAEALKPFLKQA--HQLQKLFLNNCGLGIRGVTQISEGL---- 145

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
               +EG    L++    RNR E +GA  ++  F   K L+ + + QNGI   G+  L  
Sbjct: 146 ----QEGEH-NLQILAIARNRAECDGAIEISKAFPTCKKLQELHIYQNGIKQKGMIELLS 200

Query: 344 AFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +  +N   L  +++ DN +       L   ++    L  +N+ DC ++      I + LT
Sbjct: 201 SLNKNCTELTTIDIRDNFVHEATTQVLSDLITNCSHLTAINISDCNIQGKQNKQILEALT 260

Query: 403 DNTTLEDVNLTCNEIS-VQGG--LD-LVKAMKNKTKLK 436
               +E +     E++ VQG    D +VK ++N +KL+
Sbjct: 261 KLVKIERLGYNYAELNDVQGNELYDIIVKQVENVSKLE 298


>gi|428173518|gb|EKX42420.1| hypothetical protein GUITHDRAFT_73949, partial [Guillardia theta
           CCMP2712]
          Length = 261

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 10/200 (5%)

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
           C  ++EL + +N  G  G  LLSKAL  C         P+ L   +  ++ +  +G + L
Sbjct: 21  CTLVKELDVGDNFFGPAGAGLLSKALPLC---------PI-LTHLMMRQDEIGPQGVQYL 70

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
             V      LE +++  N I   G+  L+   +   +L HL+L++N+I   GA  L  AL
Sbjct: 71  VDVLPLCAVLEHLDLNSNCIEDHGVALLASCLDRCASLAHLDLSNNSIENVGAAWLSGAL 130

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
           S+ PSL +L L    +   GA+S+++      +LE V+L  N+I  +G L + KA    +
Sbjct: 131 SRCPSLKMLVLRGNGMGREGAASLSQAFVHCKSLEHVDLGFNDIGDEGLLAVCKAAVMGS 190

Query: 434 KLKQINVSENQFGEEGVEEM 453
            L+++N+  N     G   +
Sbjct: 191 CLRELNLESNSLTHVGASSL 210



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 12/222 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L +  +  GP GV+ L D+L    C  LE L LN+N +   G  LL+  L  C   +
Sbjct: 52  LTHLMMRQDEIGPQGVQYLVDVL--PLCAVLEHLDLNSNCIEDHGVALLASCLDRCASLA 109

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
             + S           N +EN GA  L+    +  +L+ + +  NG+   G  +LS AF 
Sbjct: 110 HLDLS----------NNSIENVGAAWLSGALSRCPSLKMLVLRGNGMGREGAASLSQAFV 159

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
             K+L H++L  N I  +G + + +A      L  LNL    L   GASS+A  +     
Sbjct: 160 HCKSLEHVDLGFNDIGDEGLLAVCKAAVMGSCLRELNLESNSLTHVGASSLANTVACVER 219

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           + +VNL  N I   G   LV+A+  +T+    +  EN   ++
Sbjct: 220 IRNVNLRGNSIGNGGVSGLVQALMTRTEKFVCDARENGITDD 261



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 12/231 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           ELD+ DN FGP G   L+  L    C  L  L +  + +G  G + L   L  C      
Sbjct: 26  ELDVGDNFFGPAGAGLLSKAL--PLCPILTHLMMRQDEIGPQGVQYLVDVLPLCA----- 78

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
                 L+      N +E+ G  +LA+   +  +L  +++  N I +VG   LS A    
Sbjct: 79  -----VLEHLDLNSNCIEDHGVALLASCLDRCASLAHLDLSNNSIENVGAAWLSGALSRC 133

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
            +L+ L L  N +  +GA  L QA     SL  ++LG   +   G  ++ K     + L 
Sbjct: 134 PSLKMLVLRGNGMGREGAASLSQAFVHCKSLEHVDLGFNDIGDEGLLAVCKAAVMGSCLR 193

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           ++NL  N ++  G   L   +    +++ +N+  N  G  GV  + + + +
Sbjct: 194 ELNLESNSLTHVGASSLANTVACVERIRNVNLRGNSIGNGGVSGLVQALMT 244



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  V      LEH+++  N I   G+  L+   +    L HL+L++N+I   GA  L  A
Sbjct: 70  LVDVLPLCAVLEHLDLNSNCIEDHGVALLASCLDRCASLAHLDLSNNSIENVGAAWLSGA 129

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           LS+ PSL +L L    +   GA+S+++      +LE V+L  N+I  +G L + KA    
Sbjct: 130 LSRCPSLKMLVLRGNGMGREGAASLSQAFVHCKSLEHVDLGFNDIGDEGLLAVCKAAVMG 189

Query: 122 TKLKQINVSENQFGEEGVEEM 142
           + L+++N+  N     G   +
Sbjct: 190 SCLRELNLESNSLTHVGASSL 210



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 68/148 (45%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA+   +  +L H+++  N I +VG   LS A      L+ L L  N +  +GA  L Q
Sbjct: 97  LLASCLDRCASLAHLDLSNNSIENVGAAWLSGALSRCPSLKMLVLRGNGMGREGAASLSQ 156

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A     SL  ++LG   +   G  ++ K     + L ++NL  N ++  G   L   +  
Sbjct: 157 AFVHCKSLEHVDLGFNDIGDEGLLAVCKAAVMGSCLRELNLESNSLTHVGASSLANTVAC 216

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
             +++ +N+  N  G  GV  + + + +
Sbjct: 217 VERIRNVNLRGNSIGNGGVSGLVQALMT 244



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 69/144 (47%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L+        L H+ M Q+ I   G+  L D       L HL+LN N I   G   L  
Sbjct: 41  LLSKALPLCPILTHLMMRQDEIGPQGVQYLVDVLPLCAVLEHLDLNSNCIEDHGVALLAS 100

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L +  SLA L+L +  +++ GA+ ++  L+   +L+ + L  N +  +G   L +A  +
Sbjct: 101 CLDRCASLAHLDLSNNSIENVGAAWLSGALSRCPSLKMLVLRGNGMGREGAASLSQAFVH 160

Query: 121 KTKLKQINVSENQFGEEGVEEMEK 144
              L+ +++  N  G+EG+  + K
Sbjct: 161 CKSLEHVDLGFNDIGDEGLLAVCK 184



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 108/270 (40%), Gaps = 31/270 (11%)

Query: 104 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGE 163
           N +   G   L   +   T +K+++V +N FG  G   + K +    +   L++  DE  
Sbjct: 4   NTLCEAGAARLANVLPLCTLVKELDVGDNFFGPAGAGLLSKALPLCPILTHLMMRQDE-- 61

Query: 164 CSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKT 223
                       +   D     + L H D N          +N  + H  +  +   L  
Sbjct: 62  ------IGPQGVQYLVDVLPLCAVLEHLDLN----------SNCIEDHGVALLAS-CLDR 104

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
            A L  LDLS+N+   +G   L+  L    C +L+ L L  NG+G  G   LS+A   C 
Sbjct: 105 CASLAHLDLSNNSIENVGAAWLSGALSR--CPSLKMLVLRGNGMGREGAASLSQAFVHCK 162

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                     +L+    G N + +EG   +         L  + +  N + HVG ++L++
Sbjct: 163 ----------SLEHVDLGFNDIGDEGLLAVCKAAVMGSCLRELNLESNSLTHVGASSLAN 212

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
                + +R++NL  N+I   G   L QAL
Sbjct: 213 TVACVERIRNVNLRGNSIGNGGVSGLVQAL 242



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 64/137 (46%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            L+    +  +L+ + +  NG+   G  +LS AF   K L H++L  N I  +G + + +
Sbjct: 125 WLSGALSRCPSLKMLVLRGNGMGREGAASLSQAFVHCKSLEHVDLGFNDIGDEGLLAVCK 184

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A      L  LNL    L   GASS+A  +     + +VNL  N I   G   LV+A+  
Sbjct: 185 AAVMGSCLRELNLESNSLTHVGASSLANTVACVERIRNVNLRGNSIGNGGVSGLVQALMT 244

Query: 121 KTKLKQINVSENQFGEE 137
           +T+    +  EN   ++
Sbjct: 245 RTEKFVCDARENGITDD 261


>gi|441659579|ref|XP_003269125.2| PREDICTED: protein NLRC3 [Nomascus leucogenys]
          Length = 1136

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 20/238 (8%)

Query: 230  LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH--------D 281
            L L  N+ GP+G + +AD L+ +   +L+EL L++N +G  G K L++AL         D
Sbjct: 854  LHLQKNSIGPMGAQQMADALKQN--RSLKELMLSSNSIGDGGAKALAEALKVNQGLESLD 911

Query: 282  CYESSKKEGSPLALKVFIAG----------RNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
               +S  +    AL   +             N L ++GA+ +A   ++ +TL  + +  N
Sbjct: 912  LQSNSISDAGVAALMGALCTNQTLLSLSLTANLLHDQGARAIAVAVRENRTLTSLHLQWN 971

Query: 332  GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
             I      AL  A + N++L  L+L +N I   GA  + +AL    +L  L L    + +
Sbjct: 972  FIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGA 1031

Query: 392  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             GA  + + L  N TLE ++L  N I V G   L  A+K  + L+++N+ EN  G +G
Sbjct: 1032 PGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDG 1089



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 166/416 (39%), Gaps = 77/416 (18%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 767  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSL 826

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L    ++  GA S+A+ L    TL  ++L  N I   G   +  A+K    LK++ +S 
Sbjct: 827  SLQGNTVRDDGARSVAEALASTRTLSMLHLQKNSIGPMGAQQMADALKQNRSLKELMLSS 886

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N  G+ G + + + +K            ++G    E  D +S   +D+        L  N
Sbjct: 887  NSIGDGGAKALAEALKV-----------NQGL---ESLDLQSNSISDAGVAALMGALCTN 932

Query: 192  DS--------NHSHNASNQSHNNSNQSHNTSNQSHMSL---------------KTGARLV 228
             +        N  H+   ++   + + + T    H+                 +    L 
Sbjct: 933  QTLLSLSLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLT 992

Query: 229  ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
             LDL +NA G  G            C     LK+N              AL   Y     
Sbjct: 993  SLDLQENAIGDDGA-----------CAVARALKVNT-------------ALTALYLQVAS 1028

Query: 289  EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             G+P                GA++L       +TLE +++  N I   G  AL++A + N
Sbjct: 1029 IGAP----------------GAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1072

Query: 349  KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
             +LR LNL +N++   GAI +  ALS    L  +NL    +  +GA  I++ +  N
Sbjct: 1073 SSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHVGDSGARMISEAIKTN 1128



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 80/151 (52%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA + N+ L  L+L  NT+ 
Sbjct: 775 NQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTSLSLQGNTVR 834

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL+   +L++L+L    +   GA  +A  L  N +L+++ L+ N I   G 
Sbjct: 835 DDGARSVAEALASTRTLSMLHLQKNSIGPMGAQQMADALKQNRSLKELMLSSNSIGDGGA 894

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             L +A+K    L+ +++  N   + GV  +
Sbjct: 895 KALAEALKVNQGLESLDLQSNSISDAGVAAL 925



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 18/221 (8%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLL---RSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           R+ ++ L++N     G + LA  L   RS     L  L L +N +G  G K L+ AL   
Sbjct: 766 RIQKISLAENQISNKGAKALARSLLVNRS-----LTSLDLRSNSIGPQGAKALADAL--- 817

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
                +  + L+L+      N + ++GA+ +A      +TL  + + +N I  +G   ++
Sbjct: 818 --KINRTLTSLSLQ-----GNTVRDDGARSVAEALASTRTLSMLHLQKNSIGPMGAQQMA 870

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           DA ++N++L+ L L+ N+I   GA  L +AL     L  L+L    +  AG +++   L 
Sbjct: 871 DALKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALC 930

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
            N TL  ++LT N +  QG   +  A++    L  +++  N
Sbjct: 931 TNQTLLSLSLTANLLHDQGARAIAVAVRENRTLTSLHLQWN 971



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 989  RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLE 1048

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 1049 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1108

Query: 130  SENQFGEEGVEEMEKLMKS 148
              N  G+ G   + + +K+
Sbjct: 1109 QGNHVGDSGARMISEAIKT 1127



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           N+ ++   ++L +V   K   ++++ + +N I + G  AL+ +   N++L  L+L  N+I
Sbjct: 746 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSI 805

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L  AL    +L  L+L    ++  GA S+A+ L    TL  ++L  N I   G
Sbjct: 806 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSVAEALASTRTLSMLHLQKNSIGPMG 865

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              +  A+K    LK++ +S N  G+ G + + + +K
Sbjct: 866 AQQMADALKQNRSLKELMLSSNSIGDGGAKALAEALK 902



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 953  IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 1012

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    + + GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 1013 LKVNTALTALYLQVASIGAPGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1072

Query: 122  TKLKQINVSENQFGEEG 138
            + L+++N+ EN  G +G
Sbjct: 1073 SSLRRLNLQENSLGMDG 1089



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A      +TL  + + +N I  +G   ++DA ++N+ L+ L L+ N+I   GA  L +A
Sbjct: 841 VAEALASTRTLSMLHLQKNSIGPMGAQQMADALKQNRSLKELMLSSNSIGDGGAKALAEA 900

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L    +  AG +++   L  N TL  ++LT N +  QG   +  A++  
Sbjct: 901 LKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLTANLLHDQGARAIAVAVREN 960

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 961 RTLTSLHLQWN 971



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL  + +  N +   G  ++++A    + L  L+L  N+I   GA  +  A
Sbjct: 813 LADALKINRTLTSLSLQGNTVRDDGARSVAEALASTRTLSMLHLQKNSIGPMGAQQMADA 872

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L L    +   GA ++A+ L  N  LE ++L  N IS  G   L+ A+   
Sbjct: 873 LKQNRSLKELMLSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTN 932

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             L  ++++ N   ++G   +
Sbjct: 933 QTLLSLSLTANLLHDQGARAI 953



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            +TLE +++  N I   G  AL++A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 1045 RTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQ 1104

Query: 70   ILNLGDCLLKSAGASSIAKYLTDN 93
             +NL    +  +GA  I++ +  N
Sbjct: 1105 HINLQGNHVGDSGARMISEAIKTN 1128


>gi|51535809|dbj|BAD37894.1| deliriumA-like [Oryza sativa Japonica Group]
          Length = 628

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 106/457 (23%), Positives = 197/457 (43%), Gaps = 48/457 (10%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           +K+++TL++V M        G+  L+++   NK    ++ + N IT              
Sbjct: 175 YKEIRTLKNVNMAGRQFGDEGLFFLAESLAYNKSAEEVDFSGNGIT-------------- 220

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
                         + G  +    L  NT L+ +NL+ N I  +G   L   +     ++
Sbjct: 221 --------------AVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDILVENVGIQ 266

Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
           ++ ++    G+EG + +  ++K       L L ++  E S      E+  EN+       
Sbjct: 267 KLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAEALLENNVLRSLFV 326

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGAR-LVELDLSDNAFGPIGVEG 244
             ++HN       A    +++ N        S      G + L EL L  N FG  GV  
Sbjct: 327 KLVAHNPV-----ALYVIYDDGNYGGPLGASSLAKGILGNKTLRELHLHGNGFGNEGVRA 381

Query: 245 LADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNR 304
           L   L S+    +  L + NN +   G      +LH   E  K+  S L L +++   N 
Sbjct: 382 LMSAL-SAHKGKITVLDIGNNNITSEG------SLH-VAEFIKRTKSLLWLSLYM---ND 430

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           + +EGA+ +A   K+ KT+  V++  N I+  G++A+++  ++N  +  L L+ N I  +
Sbjct: 431 ISDEGAEKVADALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPE 490

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G   L   L     +  L LG C +  +GA  +A  L  NTTL  ++L  N +   G + 
Sbjct: 491 GVKALCDVLKFNGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDDGAIC 550

Query: 425 LVKAMK--NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L ++ K  N++ L  +++  N+  ++G   + + +K+
Sbjct: 551 LARSFKIINES-LTSLDLGFNEIRDDGAFALAQALKA 586



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 165/397 (41%), Gaps = 92/397 (23%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL---SKLPSLAIL----------- 71
           G  A+SD  ++NK +R L L++NTI Y G   + +AL   + L SL +            
Sbjct: 279 GAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAEALLENNVLRSLFVKLVAHNPVALYV 338

Query: 72  -----NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLK 125
                N G  L    GASS+AK +  N TL +++L  N    +G   L+ A+  +K K+ 
Sbjct: 339 IYDDGNYGGPL----GASSLAKGILGNKTLRELHLHGNGFGNEGVRALMSALSAHKGKIT 394

Query: 126 QINVSENQFGEEG---VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
            +++  N    EG   V E  K  KS  +  +L + D   E +++  D   + +  S  +
Sbjct: 395 VLDIGNNNITSEGSLHVAEFIKRTKSL-LWLSLYMNDISDEGAEKVADALKQNKTISTVD 453

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGV 242
              +N+      HS   S  +                +LK  + +  L+LS N  GP GV
Sbjct: 454 LGGNNI------HSKGVSAIAE---------------TLKDNSVVTTLELSYNPIGPEGV 492

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 302
           + L D+L+ +    ++ LKL    +G++G + ++    DC                    
Sbjct: 493 KALCDVLKFNG--KIQTLKLGWCQIGVSGAEFVA----DC-------------------- 526

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTI 361
                          K   TL  +++  NG+   G   L+ +F+  N++L  L+L  N I
Sbjct: 527 --------------LKYNTTLSTLDLRANGLGDDGAICLARSFKIINESLTSLDLGFNEI 572

Query: 362 TYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASS 396
              GA  L QAL     LA+  LNL +      G  S
Sbjct: 573 RDDGAFALAQALKANEDLAVTSLNLANNFFTKFGQVS 609



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 157/355 (44%), Gaps = 33/355 (9%)

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           +L K  K    LK +N++  QFG+EG+         F +A +L                +
Sbjct: 170 NLNKFYKEIRTLKNVNMAGRQFGDEGL---------FFLAESLAY-------------NK 207

Query: 173 SEEENDSDAEGDNS-NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVE 229
           S EE D    G  +  +   D     N + +S N S  +        +S  L     + +
Sbjct: 208 SAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDILVENVGIQK 267

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL--HDCYES-- 285
           L L+    G  G + ++D+L+ +    +  L+L+NN +  +G   +++AL  ++   S  
Sbjct: 268 LLLNSTNIGDEGAKAISDMLKKNKT--IRTLQLSNNTIEYSGFASIAEALLENNVLRSLF 325

Query: 286 -SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
                 +P+AL V     N     GA  LA      KTL  + +  NG  + G+ AL  A
Sbjct: 326 VKLVAHNPVALYVIYDDGNYGGPLGASSLAKGILGNKTLRELHLHGNGFGNEGVRALMSA 385

Query: 345 FEENKN-LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
              +K  +  L++ +N IT +G++ + + + +  SL  L+L    +   GA  +A  L  
Sbjct: 386 LSAHKGKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMNDISDEGAEKVADALKQ 445

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N T+  V+L  N I  +G   + + +K+ + +  + +S N  G EGV+ +  ++K
Sbjct: 446 NKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKALCDVLK 500



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 3/149 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ KT+  V++  N I+  G++A+++  ++N  +  L L+ N I  +G   L   
Sbjct: 439 VADALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKALCDV 498

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-- 119
           L     +  L LG C +  +GA  +A  L  NTTL  ++L  N +   G + L ++ K  
Sbjct: 499 LKFNGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDDGAICLARSFKII 558

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           N++ L  +++  N+  ++G   + + +K+
Sbjct: 559 NES-LTSLDLGFNEIRDDGAFALAQALKA 586



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 64/146 (43%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ K+L  + +  N I   G   ++DA ++NK +  ++L  N I  KG   + + 
Sbjct: 411 VAEFIKRTKSLLWLSLYMNDISDEGAEKVADALKQNKTISTVDLGGNNIHSKGVSAIAET 470

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     +  L L    +   G  ++   L  N  ++ + L   +I V G   +   +K  
Sbjct: 471 LKDNSVVTTLELSYNPIGPEGVKALCDVLKFNGKIQTLKLGWCQIGVSGAEFVADCLKYN 530

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  +++  N  G++G   + +  K
Sbjct: 531 TTLSTLDLRANGLGDDGAICLARSFK 556



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 74/193 (38%), Gaps = 36/193 (18%)

Query: 284 ESSKKEGSPLALKV-FIAGRN-------RLENEGAKMLAAVFKKLKTL------------ 323
           + S  E +P  +   F AG N         E E  K L   +K+++TL            
Sbjct: 134 DQSSGESTPSGIMWSFAAGSNLSTSASFNAEKESRKNLNKFYKEIRTLKNVNMAGRQFGD 193

Query: 324 ----------------ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
                           E V+   NGI  VGI A     + N  L+ LNL+ N I  +GA 
Sbjct: 194 EGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAK 253

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
            L   L +   +  L L    +   GA +I+  L  N T+  + L+ N I   G   + +
Sbjct: 254 CLSDILVENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAE 313

Query: 428 AMKNKTKLKQINV 440
           A+     L+ + V
Sbjct: 314 ALLENNVLRSLFV 326


>gi|330791723|ref|XP_003283941.1| hypothetical protein DICPUDRAFT_45148 [Dictyostelium purpureum]
 gi|325086099|gb|EGC39494.1| hypothetical protein DICPUDRAFT_45148 [Dictyostelium purpureum]
          Length = 686

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 177/394 (44%), Gaps = 31/394 (7%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A ++   +N  L  LNL+ N I+++    + +AL+K  +L  LNL   L++  G+  
Sbjct: 302 GTHAFAEMIRDNHSLTSLNLSSNRISFERVPLIAEALAKNKTLLHLNLQRNLIEGRGSEF 361

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM--KNKTKLKQINVSENQFGEEGVEEME 143
           IA  L+ N++L D+N + N+ S  G   + KA+     TK+  I+++ N     G     
Sbjct: 362 IAHGLSKNSSLTDINFSSNKFSNIGATLIAKAIAFNPNTKITNIDLNSNSIESSG----- 416

Query: 144 KLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQS 203
                     A+   D           + S    DS A  D S    N+SN S  + + S
Sbjct: 417 ----------AIAFSDIVLYNKSVTNLDLSINWIDSSALMDISQAFLNNSNSSIKSIDLS 466

Query: 204 HNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLN 263
           +N        +     +L +   L  L+L  N     G   L+  +  +    L  L+L+
Sbjct: 467 NNT--ICERGAGYLGKALLSNCSLKHLNLFCNNLEKQGAIELSKSIEMNS--TLTSLELS 522

Query: 264 NNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
           +N +G  G + LS AL        K  S +++ +    ++ +  EGA+ L  + +K  T+
Sbjct: 523 SNLIGDGGLESLSAAL-------IKNKSIVSISL---SQSSITVEGAQYLVPLLEKNNTI 572

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
           E +++  N I  +G   +S+  + NK +  L+L+ N+I  +GA  + +      +L  L+
Sbjct: 573 EFLDLSYNSIGPIGAQKISEPLKTNKTITSLDLSSNSIGDQGASAISEIFPLNSTLKRLS 632

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
           L +  + S GA SI   L  N +L  +NL  N I
Sbjct: 633 LYNNKIGSIGAISIVDNLIKNHSLYSINLLANRI 666



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 32/457 (7%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + K   +L+H+++  N I     T L++  + N  +  LNL+ N +   G++ +   L  
Sbjct: 225 ILKTNFSLKHLDLSSNQINGEAATKLANCLKCNHSIETLNLSFNDMKSVGSVQIANCLKV 284

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTK 123
             S+A LN         G  + A+ + DN +L  +NL+ N IS +    + +A+ KNKT 
Sbjct: 285 NQSIASLNFSSNFPDEEGTHAFAEMIRDNHSLTSLNLSSNRISFERVPLIAEALAKNKTL 344

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           L  +N+  N     G E +     + G++    L D     S++  +  +     + A  
Sbjct: 345 L-HLNLQRNLIEGRGSEFI-----AHGLSKNSSLTDINFS-SNKFSNIGATLIAKAIAFN 397

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
            N+ +++ D N          +NS +S      S + L   + +  LDLS N      + 
Sbjct: 398 PNTKITNIDLN----------SNSIESSGAIAFSDIVLYNKS-VTNLDLSINWIDSSALM 446

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL-HDCYESSKKEGSPLALKVFIAGR 302
            ++    ++   +++ + L+NN +   G   L KAL  +C           +LK      
Sbjct: 447 DISQAFLNNSNSSIKSIDLSNNTICERGAGYLGKALLSNC-----------SLKHLNLFC 495

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N LE +GA  L+   +   TL  +E+  N I   G+ +LS A  +NK++  ++L+ ++IT
Sbjct: 496 NNLEKQGAIELSKSIEMNSTLTSLELSSNLIGDGGLESLSAALIKNKSIVSISLSQSSIT 555

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA  L   L K  ++  L+L    +   GA  I++ L  N T+  ++L+ N I  QG 
Sbjct: 556 VEGAQYLVPLLEKNNTIEFLDLSYNSIGPIGAQKISEPLKTNKTITSLDLSSNSIGDQGA 615

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEG-VEEMEKLMK 458
             + +     + LK++++  N+ G  G +  ++ L+K
Sbjct: 616 SAISEIFPLNSTLKRLSLYNNKIGSIGAISIVDNLIK 652



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 159/394 (40%), Gaps = 85/394 (21%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L  + +  N I    +  +++A  +NK L HLNL  N I  +G+  +   LSK  SL  
Sbjct: 315 SLTSLNLSSNRISFERVPLIAEALAKNKTLLHLNLQRNLIEGRGSEFIAHGLSKNSSLTD 374

Query: 71  LNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGL---DLVKAMKNKTKL- 124
           +N       + GA+ IAK +    NT + +++L  N I   G +   D+V   K+ T L 
Sbjct: 375 INFSSNKFSNIGATLIAKAIAFNPNTKITNIDLNSNSIESSGAIAFSDIVLYNKSVTNLD 434

Query: 125 --------------------------KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
                                     K I++S N   E G   + K + S      L L 
Sbjct: 435 LSINWIDSSALMDISQAFLNNSNSSIKSIDLSNNTICERGAGYLGKALLSNCSLKHLNLF 494

Query: 159 DDEGECSDEEQDEESEEENDSDAEGD-NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS 217
            +  E     +  +S E N +    + +SNL  +    S +A+    N S  S + S QS
Sbjct: 495 CNNLEKQGAIELSKSIEMNSTLTSLELSSNLIGDGGLESLSAA-LIKNKSIVSISLS-QS 552

Query: 218 HMSLKTGARLVE----------LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGL 267
            ++++    LV           LDLS N+ GPIG + +++ L+++    +  L L++N +
Sbjct: 553 SITVEGAQYLVPLLEKNNTIEFLDLSYNSIGPIGAQKISEPLKTNK--TITSLDLSSNSI 610

Query: 268 GITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVE 327
           G                                      ++GA  ++ +F    TL+R+ 
Sbjct: 611 G--------------------------------------DQGASAISEIFPLNSTLKRLS 632

Query: 328 MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +  N I  +G  ++ D   +N +L  +NL  N I
Sbjct: 633 LYNNKIGSIGAISIVDNLIKNHSLYSINLLANRI 666



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 74/153 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+A   K K++  + + Q+ I   G   L    E+N  +  L+L+ N+I   GA  + + 
Sbjct: 534 LSAALIKNKSIVSISLSQSSITVEGAQYLVPLLEKNNTIEFLDLSYNSIGPIGAQKISEP 593

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L+L    +   GAS+I++    N+TL+ ++L  N+I   G + +V  +   
Sbjct: 594 LKTNKTITSLDLSSNSIGDQGASAISEIFPLNSTLKRLSLYNNKIGSIGAISIVDNLIKN 653

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 154
             L  IN+  N+     ++ + K ++S   A +
Sbjct: 654 HSLYSINLLANRIDSSILKRILKRLESLLPAPS 686


>gi|357440741|ref|XP_003590648.1| Ran GTPase activating protein [Medicago truncatula]
 gi|355479696|gb|AES60899.1| Ran GTPase activating protein [Medicago truncatula]
          Length = 507

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 13/239 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA L  L+LS+NA G  GV     LL+S     LEEL L N+G+     +  +KA+ +  
Sbjct: 187 GAVLRHLNLSNNAMGEKGVRAFRALLKSQN--DLEELYLMNDGI----SEEAAKAVAELI 240

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A V K+   LE        +   G  AL++
Sbjct: 241 PSTEK------LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAE 294

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A     +L+ L+L DN    +  + L + +     L  + L    L+  GA ++A  L +
Sbjct: 295 ALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKE 354

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           +  +LE +++  N+I+ +  + + + + +K  L ++N+SEN+  +EG   + K ++  G
Sbjct: 355 SAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGLG 413



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 4/156 (2%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL++A +E+   L  L++  N IT K A+ + + +S    L  LNL +  LK  GA 
Sbjct: 344 GAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAG 403

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            I+K L     L +V+L+ N I+  G   L +A+  K   K +NV+ N   +EG++E++ 
Sbjct: 404 LISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDEGIDELKD 463

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           + K+   +  ++   DE +   E+ DEE+EE +D+D
Sbjct: 464 IFKN---SPDILGPLDENDPEGEDIDEEAEENSDND 496



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 5/159 (3%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L H+ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +
Sbjct: 189 VLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 248

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA  +  +  LED   +   +  +GG+ L +A+   T LK++++ 
Sbjct: 249 LHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLR 308

Query: 131 ENQFGEEGVEEMEKLMKSFG-----MAAALVLEDDEGEC 164
           +N FG E    + K++  F        + L LEDD  E 
Sbjct: 309 DNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEA 347



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           FIAGR   E E  +++      L+   L  + +  N +   G+ A     +   +L  L 
Sbjct: 165 FIAGRP--EAEAIEVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELY 222

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L ++ I+ + A  + + +     L +L+  + +    GA +IA  +  +  LED   +  
Sbjct: 223 LMNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSST 282

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG-----MAAALVLED 470
            +  +GG+ L +A+   T LK++++ +N FG E    + K++  F        + L LED
Sbjct: 283 RVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLED 342

Query: 471 D 471
           D
Sbjct: 343 D 343



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 66/144 (45%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+ K    LE + +  +GI      A+++     +KL+ L+ ++N    +GA  +   + 
Sbjct: 210 ALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMK 269

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           + P+L         + + G  ++A+ L   T L+ ++L  N   V+ G+ L K +     
Sbjct: 270 RSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFAD 329

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L +I +S     ++G E +   +K
Sbjct: 330 LTEIYLSYLNLEDDGAEALANALK 353


>gi|357440739|ref|XP_003590647.1| Ran GTPase activating protein [Medicago truncatula]
 gi|355479695|gb|AES60898.1| Ran GTPase activating protein [Medicago truncatula]
          Length = 533

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 13/239 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA L  L+LS+NA G  GV     LL+S     LEEL L N+G+     +  +KA+ +  
Sbjct: 213 GAVLRHLNLSNNAMGEKGVRAFRALLKSQN--DLEELYLMNDGI----SEEAAKAVAELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A V K+   LE        +   G  AL++
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A     +L+ L+L DN    +  + L + +     L  + L    L+  GA ++A  L +
Sbjct: 321 ALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKE 380

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           +  +LE +++  N+I+ +  + + + + +K  L ++N+SEN+  +EG   + K ++  G
Sbjct: 381 SAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGLG 439



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 4/156 (2%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL++A +E+   L  L++  N IT K A+ + + +S    L  LNL +  LK  GA 
Sbjct: 370 GAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAG 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            I+K L     L +V+L+ N I+  G   L +A+  K   K +NV+ N   +EG++E++ 
Sbjct: 430 LISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDEGIDELKD 489

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           + K+   +  ++   DE +   E+ DEE+EE +D+D
Sbjct: 490 IFKN---SPDILGPLDENDPEGEDIDEEAEENSDND 522



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 5/159 (3%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L H+ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +
Sbjct: 215 VLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 274

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA  +  +  LED   +   +  +GG+ L +A+   T LK++++ 
Sbjct: 275 LHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLR 334

Query: 131 ENQFGEEGVEEMEKLMKSFG-----MAAALVLEDDEGEC 164
           +N FG E    + K++  F        + L LEDD  E 
Sbjct: 335 DNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEA 373



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           FIAGR   E E  +++      L+   L  + +  N +   G+ A     +   +L  L 
Sbjct: 191 FIAGRP--EAEAIEVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELY 248

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L ++ I+ + A  + + +     L +L+  + +    GA +IA  +  +  LED   +  
Sbjct: 249 LMNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSST 308

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG-----MAAALVLED 470
            +  +GG+ L +A+   T LK++++ +N FG E    + K++  F        + L LED
Sbjct: 309 RVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLED 368

Query: 471 D 471
           D
Sbjct: 369 D 369



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 66/144 (45%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+ K    LE + +  +GI      A+++     +KL+ L+ ++N    +GA  +   + 
Sbjct: 236 ALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIADVMK 295

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           + P+L         + + G  ++A+ L   T L+ ++L  N   V+ G+ L K +     
Sbjct: 296 RSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFAD 355

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L +I +S     ++G E +   +K
Sbjct: 356 LTEIYLSYLNLEDDGAEALANALK 379


>gi|260812776|ref|XP_002601096.1| hypothetical protein BRAFLDRAFT_75531 [Branchiostoma floridae]
 gi|229286387|gb|EEN57108.1| hypothetical protein BRAFLDRAFT_75531 [Branchiostoma floridae]
          Length = 543

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 165/405 (40%), Gaps = 56/405 (13%)

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
           P   ILN+ D  L      ++ +       L+ + L+C++ S +G L L + +   T L+
Sbjct: 124 PEHHILNMDDERLTDCEIKALCQLFPYMKHLKTLVLSCSDFSSEGALHLARNLAFLTSLE 183

Query: 126 QINVSENQFGEEGVEEM---EKLMKSFGMAAALVLEDDEGE-CSDEEQDEESEEENDSDA 181
           +++++EN+ G++G+ +M    + + +F +A ++V  D   + CS                
Sbjct: 184 ELDLTENKIGDDGLFKMISNWRHIYNFEIADSIVSVDPGLQLCSRR-------------V 230

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGAR----LVELDLSDNAF 237
              N +L  N                   +  S+    +L   AR    + ELDL  N  
Sbjct: 231 SLPNFSLKLN------------------CNRLSDVGMATLAVHARSLRHVTELDLGRNGI 272

Query: 238 GPIGVEGLADLLRSSCCF--ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
           G  G   LA    SS C+   L  L L  N +   G    SK L               L
Sbjct: 273 GDDGAAALA----SSFCYLTRLRVLILYINNISSDGAVAFSKGLRFLQR----------L 318

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           +V   G N + + G   LA  F  +  +E +++   G+ H G  A++        L+ L+
Sbjct: 319 RVLSLGANHIGDRGVTELAGQFVHICNIEVLKLDHTGMTHKGAIAIAAQVHHLLCLKQLD 378

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L  N I   GA  L +   +L SL  L L DC + S GA  I+  +     L +++L  N
Sbjct: 379 LGKNKIGDLGARALTEVFPRLRSLQDLFLWDCGITSTGAEVISNRMVHLLQLRELHLANN 438

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           +I++     LV        L +I++   +  E G +  E +  SF
Sbjct: 439 DITLDNLQLLVSGFLASPSLSKIDLRGVRVSELGTQA-EGMFCSF 482



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 78/168 (46%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NRL + G   LA   + L+ +  +++ +NGI   G  AL+ +F     LR L L  N I+
Sbjct: 242 NRLSDVGMATLAVHARSLRHVTELDLGRNGIGDDGAAALASSFCYLTRLRVLILYINNIS 301

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA+   + L  L  L +L+LG   +   G + +A        +E + L    ++ +G 
Sbjct: 302 SDGAVAFSKGLRFLQRLRVLSLGANHIGDRGVTELAGQFVHICNIEVLKLDHTGMTHKGA 361

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           + +   + +   LKQ+++ +N+ G+ G   + ++         L L D
Sbjct: 362 IAIAAQVHHLLCLKQLDLGKNKIGDLGARALTEVFPRLRSLQDLFLWD 409



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 74/158 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   + L+ +  +++ +NGI   G  AL+ +F    +LR L L  N I+  GA+   + 
Sbjct: 252 LAVHARSLRHVTELDLGRNGIGDDGAAALASSFCYLTRLRVLILYINNISSDGAVAFSKG 311

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L  L  L +L+LG   +   G + +A        +E + L    ++ +G + +   + + 
Sbjct: 312 LRFLQRLRVLSLGANHIGDRGVTELAGQFVHICNIEVLKLDHTGMTHKGAIAIAAQVHHL 371

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
             LKQ+++ +N+ G+ G   + ++         L L D
Sbjct: 372 LCLKQLDLGKNKIGDLGARALTEVFPRLRSLQDLFLWD 409



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 1/181 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F  +  +E +++   G+ H G  A++        L+ L+L  N I   GA  L + 
Sbjct: 336 LAGQFVHICNIEVLKLDHTGMTHKGAIAIAAQVHHLLCLKQLDLGKNKIGDLGARALTEV 395

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
             +L SL  L L DC + S GA  I+  +     L +++L  N+I++     LV      
Sbjct: 396 FPRLRSLQDLFLWDCGITSTGAEVISNRMVHLLQLRELHLANNDITLDNLQLLVSGFLAS 455

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L +I++   +  E G +  E +  SF       ++   G C  E+       + DSD 
Sbjct: 456 PSLSKIDLRGVRVSELGTQA-EGMFCSFVKRLKGSVDLHGGYCGREDGLRWHTGDGDSDY 514

Query: 182 E 182
           E
Sbjct: 515 E 515


>gi|320169066|gb|EFW45965.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 529

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 205/437 (46%), Gaps = 33/437 (7%)

Query: 37  NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
           N  L  +NL  N I   GA  + +AL    +L  L LG   +  AGA +IA+ L  NTTL
Sbjct: 52  NTTLTEINLGGNQIGAAGAQAIAEALKANRALKKLALGRNQIGDAGAEAIAEALKVNTTL 111

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
            ++ L+ N I   G   + +A+K  +   ++++SENQ G+ G   +   +K       + 
Sbjct: 112 TNIYLSKNHIGQVGAQAIAEALKKGSP--RVSLSENQIGDAGALAIAAALKVNTTVTEVG 169

Query: 157 LEDDEGECSDEEQDEESEEEN--------------DSDAEGDNSNLSHNDSNHSHNASNQ 202
           L  ++ + +  +   E+ + N              D+ A+     LS N      N   Q
Sbjct: 170 LGMNQIDVAGAQAIAEALKVNATLTNLFLGGNPFGDAGAQAVAEALSANTKLICLNLP-Q 228

Query: 203 SHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKL 262
           S      +H  ++    +L+    ++ L L++N  G +G + +A  L+ +    + E+ L
Sbjct: 229 SQIGEAGAHAIAS----ALEVNTTVMLLGLNENQIGDLGAQAIAAALKVNTT--VTEVGL 282

Query: 263 NNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
             N + + G + +++AL           + + + + +   N++ + GA+ +A      KT
Sbjct: 283 GMNQIDVAGAQAIAEALKV---------NQIVISIGL-DENQIGDAGAEAIAEAITVNKT 332

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           ++++ + +N I   G  A++ AF+ N+ +  L L+ N I   GA  + +AL    ++  L
Sbjct: 333 VKKLGLGKNQIGDAGAQAIAVAFQVNQTVTALGLHQNRIGDVGAQAIAEALKVNKTVTEL 392

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
            L +  L  AGA +IA+ L  NTT+ ++ L  N+I   G   +V+A++    +K + +  
Sbjct: 393 GLYENQLGDAGAEAIAQALKVNTTVAELGLDGNQIGDVGAQAIVEALRVNKTVKMLYLEG 452

Query: 443 NQFGEEGVEEMEKLMKS 459
           NQ G+    E+   +K+
Sbjct: 453 NQIGDAKALEIAMALKT 469



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 172/389 (44%), Gaps = 23/389 (5%)

Query: 93  NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           NTTL ++NL  N+I   G   + +A+K    LK++ +  NQ G+ G E + + +K     
Sbjct: 52  NTTLTEINLGGNQIGAAGAQAIAEALKANRALKKLALGRNQIGDAGAEAIAEALKVNTTL 111

Query: 153 AALVLEDDE-----GECSDEEQDEESEEENDSDAE-GDNSNLSHNDSNHSHNASNQSHNN 206
             + L  +       +   E   + S   + S+ + GD   L+   +   +    +    
Sbjct: 112 TNIYLSKNHIGQVGAQAIAEALKKGSPRVSLSENQIGDAGALAIAAALKVNTTVTEVGLG 171

Query: 207 SNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
            NQ      Q+   +LK  A L  L L  N FG  G + +A+ L  S    L  L L  +
Sbjct: 172 MNQIDVAGAQAIAEALKVNATLTNLFLGGNPFGDAGAQAVAEAL--SANTKLICLNLPQS 229

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG--RNRLENEGAKMLAAVFKKLKTL 323
            +G  G   ++ AL             +   V + G   N++ + GA+ +AA  K   T+
Sbjct: 230 QIGEAGAHAIASALE------------VNTTVMLLGLNENQIGDLGAQAIAAALKVNTTV 277

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
             V +  N I   G  A+++A + N+ +  + L++N I   GA  + +A++   ++  L 
Sbjct: 278 TEVGLGMNQIDVAGAQAIAEALKVNQIVISIGLDENQIGDAGAEAIAEAITVNKTVKKLG 337

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           LG   +  AGA +IA     N T+  + L  N I   G   + +A+K    + ++ + EN
Sbjct: 338 LGKNQIGDAGAQAIAVAFQVNQTVTALGLHQNRIGDVGAQAIAEALKVNKTVTELGLYEN 397

Query: 444 QFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           Q G+ G E + + +K     A L L+ ++
Sbjct: 398 QLGDAGAEAIAQALKVNTTVAELGLDGNQ 426



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 74/139 (53%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KT++ + + +N I   G  A++ AF+ N+ +  L L+ N I   GA  + +AL    ++ 
Sbjct: 331 KTVKKLGLGKNQIGDAGAQAIAVAFQVNQTVTALGLHQNRIGDVGAQAIAEALKVNKTVT 390

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L +  L  AGA +IA+ L  NTT+ ++ L  N+I   G   +V+A++    +K + +
Sbjct: 391 ELGLYENQLGDAGAEAIAQALKVNTTVAELGLDGNQIGDVGAQAIVEALRVNKTVKMLYL 450

Query: 130 SENQFGEEGVEEMEKLMKS 148
             NQ G+    E+   +K+
Sbjct: 451 EGNQIGDAKALEIAMALKT 469



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 11/279 (3%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  V +  N I   G  A+++A + N  L +L L  N     GA  + +ALS    L  
Sbjct: 164 TVTEVGLGMNQIDVAGAQAIAEALKVNATLTNLFLGGNPFGDAGAQAVAEALSANTKLIC 223

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    +  AGA +IA  L  NTT+  + L  N+I   G   +  A+K  T + ++ + 
Sbjct: 224 LNLPQSQIGEAGAHAIASALEVNTTVMLLGLNENQIGDLGAQAIAAALKVNTTVTEVGLG 283

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDE-GECSDEEQDEESEEENDSDAEGDNSNLS 189
            NQ    G + + + +K   +  ++ L++++ G+   E   E           G   N  
Sbjct: 284 MNQIDVAGAQAIAEALKVNQIVISIGLDENQIGDAGAEAIAEAITVNKTVKKLGLGKNQI 343

Query: 190 HNDSNHSHNASNQSHN-------NSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIG 241
            +    +   + Q +        + N+  +   Q+   +LK    + EL L +N  G  G
Sbjct: 344 GDAGAQAIAVAFQVNQTVTALGLHQNRIGDVGAQAIAEALKVNKTVTELGLYENQLGDAG 403

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
            E +A  L+ +   A  EL L+ N +G  G + + +AL 
Sbjct: 404 AEAIAQALKVNTTVA--ELGLDGNQIGDVGAQAIVEALR 440



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL ++ +  N     G  A+++A   N KL  LNL  + I   GA  +  A
Sbjct: 183 IAEALKVNATLTNLFLGGNPFGDAGAQAVAEALSANTKLICLNLPQSQIGEAGAHAIASA 242

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++ +L L +  +   GA +IA  L  NTT+ +V L  N+I V G   + +A+K  
Sbjct: 243 LEVNTTVMLLGLNENQIGDLGAQAIAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALKVN 302

Query: 122 TKLKQINVSENQFGE 136
             +  I + ENQ G+
Sbjct: 303 QIVISIGLDENQIGD 317



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 37/313 (11%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEE------------------------- 36
           +A   K   TL ++ + +N I  VG  A+++A ++                         
Sbjct: 101 IAEALKVNTTLTNIYLSKNHIGQVGAQAIAEALKKGSPRVSLSENQIGDAGALAIAAALK 160

Query: 37  -NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
            N  +  + L  N I   GA  + +AL    +L  L LG      AGA ++A+ L+ NT 
Sbjct: 161 VNTTVTEVGLGMNQIDVAGAQAIAEALKVNATLTNLFLGGNPFGDAGAQAVAEALSANTK 220

Query: 96  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           L  +NL  ++I   G   +  A++  T +  + ++ENQ G+ G + +   +K       +
Sbjct: 221 LICLNLPQSQIGEAGAHAIASALEVNTTVMLLGLNENQIGDLGAQAIAAALKVNTTVTEV 280

Query: 156 VLEDDEGECSDEEQDEESEEEN--------DSDAEGDNSNLSHNDSNHSHNASNQSHNNS 207
            L  ++ + +  +   E+ + N        D +  GD    +  ++   +    +     
Sbjct: 281 GLGMNQIDVAGAQAIAEALKVNQIVISIGLDENQIGDAGAEAIAEAITVNKTVKKLGLGK 340

Query: 208 NQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNG 266
           NQ  +   Q+  ++ +    +  L L  N  G +G + +A+ L+ +    + EL L  N 
Sbjct: 341 NQIGDAGAQAIAVAFQVNQTVTALGLHQNRIGDVGAQAIAEALKVNKT--VTELGLYENQ 398

Query: 267 LGITGCKLLSKAL 279
           LG  G + +++AL
Sbjct: 399 LGDAGAEAIAQAL 411



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  F+  +T+  + + QN I  VG  A+++A + NK +  L L +N +   GA  + QA
Sbjct: 351 IAVAFQVNQTVTALGLHQNRIGDVGAQAIAEALKVNKTVTELGLYENQLGDAGAEAIAQA 410

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-N 120
           L    ++A L L    +   GA +I + L  N T++ + L  N+I     L++  A+K N
Sbjct: 411 LKVNTTVAELGLDGNQIGDVGAQAIVEALRVNKTVKMLYLEGNQIGDAKALEIAMALKTN 470

Query: 121 KT 122
           KT
Sbjct: 471 KT 472



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 79/160 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +AA  K   T+  V +  N I   G  A+++A + N+ +  + L++N I   GA  + +A
Sbjct: 267 IAAALKVNTTVTEVGLGMNQIDVAGAQAIAEALKVNQIVISIGLDENQIGDAGAEAIAEA 326

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           ++   ++  L LG   +  AGA +IA     N T+  + L  N I   G   + +A+K  
Sbjct: 327 ITVNKTVKKLGLGKNQIGDAGAQAIAVAFQVNQTVTALGLHQNRIGDVGAQAIAEALKVN 386

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             + ++ + ENQ G+ G E + + +K     A L L+ ++
Sbjct: 387 KTVTELGLYENQLGDAGAEAIAQALKVNTTVAELGLDGNQ 426


>gi|440792441|gb|ELR13663.1| leucine rich repeat containing protein [Acanthamoeba castellanii str.
            Neff]
          Length = 1544

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 14/259 (5%)

Query: 221  LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
            L T   L   DL  N  G +G   +A  L  +    +  + L  N LG+ G   L+  L 
Sbjct: 766  LATTDTLRYFDLRWNKVGVVGARAVAQALAHNTSVGI--VNLRENRLGMDGVMTLADFL- 822

Query: 281  DCYESSKKEGSPLALKVFIAGRNRLE-------NEGAKMLAAVFKKLKTLERVEMPQNGI 333
                 + +    L L+  I+    +        +E  K L A+ K   T+  +++  N I
Sbjct: 823  ----LTNRSVYSLDLRANISPPTEMNYRIGESGDEAIKYLGALLKLNSTVTHLDLCSNSI 878

Query: 334  YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
               G  AL+ A E   +L  L+L+ N I + G   LG++L    SL +L L    L+   
Sbjct: 879  GSEGAMALASALEFRSSLYILHLDFNKIDFAGVRALGRSLLVNQSLLVLTLAHNFLEDDA 938

Query: 394  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
              ++AK L  N TL  ++L  N +S +G   L +A+K    L ++ +S N  G+ G   +
Sbjct: 939  VCALAKALATNATLTKLDLQKNHVSNKGASALAEALKTNQTLTELYLSYNGVGDAGAYRL 998

Query: 454  EKLMKSFGMAAALVLEDDE 472
               +K      +L LE+++
Sbjct: 999  ADALKHNDGLLSLELENNK 1017



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/160 (30%), Positives = 79/160 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            L A+ K   T+ H+++  N I   G  AL+ A E    L  L+L+ N I + G   LG++
Sbjct: 858  LGALLKLNSTVTHLDLCSNSIGSEGAMALASALEFRSSLYILHLDFNKIDFAGVRALGRS 917

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    SL +L L    L+     ++AK L  N TL  ++L  N +S +G   L +A+K  
Sbjct: 918  LLVNQSLLVLTLAHNFLEDDAVCALAKALATNATLTKLDLQKNHVSNKGASALAEALKTN 977

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
              L ++ +S N  G+ G   +   +K      +L LE+++
Sbjct: 978  QTLTELYLSYNGVGDAGAYRLADALKHNDGLLSLELENNK 1017



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 98/397 (24%), Positives = 167/397 (42%), Gaps = 33/397 (8%)

Query: 42   HLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNT---TL 96
            +L L  +  + KG   LG+ LS +PS+ +  L+L    L   G   +A  L        L
Sbjct: 686  NLTLRGHRFSSKGIALLGEVLS-VPSVVVKSLDLRGNRLGDGGIDRLADLLCTGALGRQL 744

Query: 97   EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
              +++  NEI  +G +DL + +     L+  ++  N+ G  G            +A AL 
Sbjct: 745  TSLDIRGNEIDDRGTVDLARFLATTDTLRYFDLRWNKVGVVGAR---------AVAQALA 795

Query: 157  LEDDEGECSDEEQDEESEEEND-SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSN 215
                 G  +  E     +     +D    N ++   D   + +   + +    +S + + 
Sbjct: 796  HNTSVGIVNLRENRLGMDGVMTLADFLLTNRSVYSLDLRANISPPTEMNYRIGESGDEAI 855

Query: 216  QSHMSL-KTGARLVELDLSDNAFGPIGVEGLADLL--RSSCCFALEELKLNNNGLGITGC 272
            +   +L K  + +  LDL  N+ G  G   LA  L  RSS    L  L L+ N +   G 
Sbjct: 856  KYLGALLKLNSTVTHLDLCSNSIGSEGAMALASALEFRSS----LYILHLDFNKIDFAGV 911

Query: 273  KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
            + L ++L              +L V     N LE++    LA       TL ++++ +N 
Sbjct: 912  RALGRSLL----------VNQSLLVLTLAHNFLEDDAVCALAKALATNATLTKLDLQKNH 961

Query: 333  IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
            + + G +AL++A + N+ L  L L+ N +   GA  L  AL     L  L L +  + S 
Sbjct: 962  VSNKGASALAEALKTNQTLTELYLSYNGVGDAGAYRLADALKHNDGLLSLELENNKITSR 1021

Query: 393  GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            G  + A  L  NTTL   NL+ N I+ +G   + +A+
Sbjct: 1022 GGKAFASMLARNTTLRFFNLSGNLITDEGLTAISRAL 1058



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 39/343 (11%)

Query: 38   KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 97
            ++L  L++  N I  +G + L + L+   +L   +L    +   GA ++A+ L  NT++ 
Sbjct: 742  RQLTSLDIRGNEIDDRGTVDLARFLATTDTLRYFDLRWNKVGVVGARAVAQALAHNTSVG 801

Query: 98   DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN---------QFGEEGVEEMEKLMKS 148
             VNL  N + + G + L   +     +  +++  N         + GE G E ++ L   
Sbjct: 802  IVNLRENRLGMDGVMTLADFLLTNRSVYSLDLRANISPPTEMNYRIGESGDEAIKYLGAL 861

Query: 149  FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNS- 207
              + + +   D    CS+    E +     +     +  + H D N    A  ++   S 
Sbjct: 862  LKLNSTVTHLD---LCSNSIGSEGAMALASALEFRSSLYILHLDFNKIDFAGVRALGRSL 918

Query: 208  --NQS-------HNTSNQSHM-----SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSC 253
              NQS       HN      +     +L T A L +LDL  N     G   LA+ L+++ 
Sbjct: 919  LVNQSLLVLTLAHNFLEDDAVCALAKALATNATLTKLDLQKNHVSNKGASALAEALKTNQ 978

Query: 254  CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
               L EL L+ NG+G  G   L+ AL       K     L+L++     N++ + G K  
Sbjct: 979  --TLTELYLSYNGVGDAGAYRLADAL-------KHNDGLLSLEL---ENNKITSRGGKAF 1026

Query: 314  AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
            A++  +  TL    +  N I   G+TA+S A   N+    L+L
Sbjct: 1027 ASMLARNTTLRFFNLSGNLITDEGLTAISRALMSNRASSLLDL 1069



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 4/145 (2%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
             + AL+ A   N  L  L+L  N ++ KGA  L +AL    +L  L L    +  AGA  
Sbjct: 938  AVCALAKALATNATLTKLDLQKNHVSNKGASALAEALKTNQTLTELYLSYNGVGDAGAYR 997

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            +A  L  N  L  + L  N+I+ +GG      +   T L+  N+S N   +EG+  + + 
Sbjct: 998  LADALKHNDGLLSLELENNKITSRGGKAFASMLARNTTLRFFNLSGNLITDEGLTAISRA 1057

Query: 146  MKSFGMAAALVLE----DDEGECSD 166
            + S   ++ L L+    D   EC D
Sbjct: 1058 LMSNRASSLLDLQVSGVDGRDECWD 1082



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 58/117 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA       TL  +++ +N + + G +AL++A + N+ L  L L+ N +   GA  L  A
Sbjct: 942  LAKALATNATLTKLDLQKNHVSNKGASALAEALKTNQTLTELYLSYNGVGDAGAYRLADA 1001

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
            L     L  L L +  + S G  + A  L  NTTL   NL+ N I+ +G   + +A+
Sbjct: 1002 LKHNDGLLSLELENNKITSRGGKAFASMLARNTTLRFFNLSGNLITDEGLTAISRAL 1058



 Score = 40.4 bits (93), Expect = 2.2,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 5/129 (3%)

Query: 257  LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR-NRLENEGAKMLAA 315
            L  L L+ N L       L++AL    ++ ++  + L+L   +  R NRL++EG  +LA 
Sbjct: 1383 LTSLDLSWNRLDAATIAPLAEAL----DNRRQANAGLSLLTTLVLRGNRLQDEGVAVLAR 1438

Query: 316  VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
                  T+  + +  N I   GI A+ D    N+ L  L+L  N I  +G + LG AL  
Sbjct: 1439 SLLNNCTVTTLNLDTNRITDEGIKAVEDLVAGNEVLAFLSLVSNGIKGEGLLALGAALRH 1498

Query: 376  LPSLAILNL 384
              S+  L+L
Sbjct: 1499 NRSIVKLSL 1507


>gi|320167147|gb|EFW44046.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1423

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 63/377 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   ++  TL  +++  N I   G  A+++A   NK L  L+L++N I   GA  + +A
Sbjct: 67  IAEALRENATLTQLDLHNNQIGASGARAIAEALRVNKTLTQLDLHNNQIGAAGASAIAEA 126

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+   +L  L L    +   GA++IA  L +N TL  ++L  N+I   G   + +A++  
Sbjct: 127 LTVNGTLTQLGLSSNGIGVGGANAIAVALRENATLTQLDLHNNQIGASGARAIAEALRVN 186

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L Q+++  N+ G++G E + +++K   + A L+                         
Sbjct: 187 KTLTQLDLHNNRIGDDGAEALAEVLK---VNATLI------------------------- 218

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPI 240
                               Q H  +    N+  Q+   +L   +RL ELDL DN  G  
Sbjct: 219 --------------------QLHLRTTWMSNSGAQAIAKALIVNSRLSELDLYDNHIGDD 258

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLA--LKVF 298
             + +A  L  +      +L ++          L    L +    S   G  +A  L+  
Sbjct: 259 AKQAIAKALLFNSTMKGLDLDIDRQTKPSADLFLQLTKLREAINESSLSGLQVAPYLQTI 318

Query: 299 IAG------------RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           + G            + +L +   +++A   +   +L  +E+  N I   G  ++S+A  
Sbjct: 319 LQGVQTTRIVKLWLNKCQLGDAECQVIATELRLNTSLTSLELTDNQIGDAGALSISEALR 378

Query: 347 ENKNLRHLNLNDNTITY 363
           ENK L+ LNL +N I Y
Sbjct: 379 ENKTLQSLNLTNNQIGY 395



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 12/238 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+   RL +L L  N     G   +A+ LR +    L +L L+NN +G +G + +++AL
Sbjct: 42  ALEVNQRLTKLSLRWNEIDETGANAIAEALRENA--TLTQLDLHNNQIGASGARAIAEAL 99

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L L       N++   GA  +A       TL ++ +  NGI   G  
Sbjct: 100 R-----VNKTLTQLDLH-----NNQIGAAGASAIAEALTVNGTLTQLGLSSNGIGVGGAN 149

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++ A  EN  L  L+L++N I   GA  + +AL    +L  L+L +  +   GA ++A+
Sbjct: 150 AIAVALRENATLTQLDLHNNQIGASGARAIAEALRVNKTLTQLDLHNNRIGDDGAEALAE 209

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            L  N TL  ++L    +S  G   + KA+   ++L ++++ +N  G++  + + K +
Sbjct: 210 VLKVNATLIQLHLRTTWMSNSGAQAIAKALIVNSRLSELDLYDNHIGDDAKQAIAKAL 267



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 154/420 (36%), Gaps = 113/420 (26%)

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           A A +IA+ L  N  L  ++L  NEI   G   + +A++    L Q+++  NQ G  G  
Sbjct: 34  AEALAIARALEVNQRLTKLSLRWNEIDETGANAIAEALRENATLTQLDLHNNQIGASGAR 93

Query: 141 EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS 200
            + + ++                                     N  L+  D        
Sbjct: 94  AIAEALRV------------------------------------NKTLTQLDL------- 110

Query: 201 NQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEEL 260
              HNN   +   S  +  +L     L +L LS N  G  G   +A  LR +    L +L
Sbjct: 111 ---HNNQIGAAGASAIA-EALTVNGTLTQLGLSSNGIGVGGANAIAVALRENA--TLTQL 164

Query: 261 KLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
            L+NN +G +G + +++AL        K  + L L       NR+ ++GA+ LA V K  
Sbjct: 165 DLHNNQIGASGARAIAEALR-----VNKTLTQLDLH-----NNRIGDDGAEALAEVLKVN 214

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL------- 373
            TL ++ +    + + G  A++ A   N  L  L+L DN I       + +AL       
Sbjct: 215 ATLIQLHLRTTWMSNSGAQAIAKALIVNSRLSELDLYDNHIGDDAKQAIAKALLFNSTMK 274

Query: 374 -----------------------------SKLPSLAI------------------LNLGD 386
                                        S L  L +                  L L  
Sbjct: 275 GLDLDIDRQTKPSADLFLQLTKLREAINESSLSGLQVAPYLQTILQGVQTTRIVKLWLNK 334

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
           C L  A    IA  L  NT+L  + LT N+I   G L + +A++    L+ +N++ NQ G
Sbjct: 335 CQLGDAECQVIATELRLNTSLTSLELTDNQIGDAGALSISEALRENKTLQSLNLTNNQIG 394



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 85/156 (54%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N ++  GA  +A   ++  TL ++++  N I   G  A+++A   NK L  L+L++N I 
Sbjct: 57  NEIDETGANAIAEALRENATLTQLDLHNNQIGASGARAIAEALRVNKTLTQLDLHNNQIG 116

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL+   +L  L L    +   GA++IA  L +N TL  ++L  N+I   G 
Sbjct: 117 AAGASAIAEALTVNGTLTQLGLSSNGIGVGGANAIAVALRENATLTQLDLHNNQIGASGA 176

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A++    L Q+++  N+ G++G E + +++K
Sbjct: 177 RAIAEALRVNKTLTQLDLHNNRIGDDGAEALAEVLK 212



 Score = 45.8 bits (107), Expect = 0.049,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 28/147 (19%)

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++ A E N+ L  L+L  N I   GA  + +AL +  +L  L+L +  + ++GA +IA+
Sbjct: 38  AIARALEVNQRLTKLSLRWNEIDETGANAIAEALRENATLTQLDLHNNQIGASGARAIAE 97

Query: 400 ----------------------------YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
                                        LT N TL  + L+ N I V G   +  A++ 
Sbjct: 98  ALRVNKTLTQLDLHNNQIGAAGASAIAEALTVNGTLTQLGLSSNGIGVGGANAIAVALRE 157

Query: 432 KTKLKQINVSENQFGEEGVEEMEKLMK 458
              L Q+++  NQ G  G   + + ++
Sbjct: 158 NATLTQLDLHNNQIGASGARAIAEALR 184



 Score = 38.9 bits (89), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 46/91 (50%)

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           L++    I    A+ + +AL     L  L+L    +   GA++IA+ L +N TL  ++L 
Sbjct: 24  LSIQRQQIGQAEALAIARALEVNQRLTKLSLRWNEIDETGANAIAEALRENATLTQLDLH 83

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
            N+I   G   + +A++    L Q+++  NQ
Sbjct: 84  NNQIGASGARAIAEALRVNKTLTQLDLHNNQ 114


>gi|320164466|gb|EFW41365.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 675

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 117/236 (49%), Gaps = 13/236 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L LS N  G      +A+ L+ +    L +L L  N +G  G   +++AL
Sbjct: 43  ALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTT--LIKLNLYQNQIGNAGATAIAEAL 100

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L+L       N++ N GA+++A V K + TL  + + QN I + G T
Sbjct: 101 K-----VNKTLTTLSL-----SGNQIGNVGAQVMAEVLK-VNTLTELNLRQNQIGNAGAT 149

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + N  L  L+L +N I   GA+ + +A     +L  L+L    +  AGA +IA+
Sbjct: 150 AIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDAGAQAIAE 209

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            L  N TL+++ L  N+I   G   + +A+K    LK + ++EN     G+  + +
Sbjct: 210 ALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNENFLTNTGINALRQ 265



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 13/230 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           EL+L  N  G  G   +A+ L+ +    L  L L+ N +G    + +++AL       K 
Sbjct: 24  ELNLYQNQIGDPGAYTIAEALKVNKT--LTALSLSGNQIGDAAARTIAEAL-------KV 74

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             + + L ++   +N++ N GA  +A   K  KTL  + +  N I +VG   +++  + N
Sbjct: 75  NTTLIKLNLY---QNQIGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVN 131

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L  LNL  N I   GA  + +AL     L  L+L +  +   GA +IA+    NTTL 
Sbjct: 132 -TLTELNLRQNQIGNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFKVNTTLT 190

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            ++L  N+I   G   + +A+K    LK++ +  NQ G+ G + + + +K
Sbjct: 191 TLSLHQNQIGDAGAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALK 240



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 74/137 (54%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K+ TL  + + QN I + G TA+++A + N +L  L+L +N I   GA+ + +A     +
Sbjct: 129 KVNTLTELNLRQNQIGNAGATAIAEALKVNTRLTGLDLWENQIGDDGALAIAEAFKVNTT 188

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L  L+L    +  AGA +IA+ L  N TL+++ L  N+I   G   + +A+K    LK +
Sbjct: 189 LTTLSLHQNQIGDAGAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTL 248

Query: 128 NVSENQFGEEGVEEMEK 144
            ++EN     G+  + +
Sbjct: 249 FLNENFLTNTGINALRQ 265



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 15/187 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L LS N  G +G + +A++L+ +    L EL L  N +G  G   +++AL
Sbjct: 99  ALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVNT---LTELNLRQNQIGNAGATAIAEAL 155

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                +++  G  L         N++ ++GA  +A  FK   TL  + + QN I   G  
Sbjct: 156 K---VNTRLTGLDL-------WENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDAGAQ 205

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + NK L+ L L  N I   GA  + +AL    +L  L L +  L + G +++ +
Sbjct: 206 AIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKTLKTLFLNENFLTNTGINALRQ 265

Query: 400 YLTDNTT 406
             T NTT
Sbjct: 266 --TGNTT 270



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 1/137 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I       +++A + N  L  LNL  N I   GA  + +A
Sbjct: 40  IAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLYQNQIGNAGATAIAEA 99

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L    + + GA  +A+ L  N TL ++NL  N+I   G   + +A+K  
Sbjct: 100 LKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVN-TLTELNLRQNQIGNAGATAIAEALKVN 158

Query: 122 TKLKQINVSENQFGEEG 138
           T+L  +++ ENQ G++G
Sbjct: 159 TRLTGLDLWENQIGDDG 175



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 1/146 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I +VG   +++  + N  L  LNL  N I   GA  + +A
Sbjct: 96  IAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVNT-LTELNLRQNQIGNAGATAIAEA 154

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L +  +   GA +IA+    NTTL  ++L  N+I   G   + +A+K  
Sbjct: 155 LKVNTRLTGLDLWENQIGDDGALAIAEAFKVNTTLTTLSLHQNQIGDAGAQAIAEALKVN 214

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK++ +  NQ G+ G + + + +K
Sbjct: 215 KTLKELFLWRNQIGDAGAQAIAEALK 240



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 24/260 (9%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           QN I   G   +++A + NK L  L+L+ N I    A  + +AL    +L  LNL    +
Sbjct: 29  QNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLYQNQI 88

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
            +AGA++IA+ L  N TL  ++L+ N+I   G   + + +K  T L ++N+ +NQ G  G
Sbjct: 89  GNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLKVNT-LTELNLRQNQIGNAG 147

Query: 139 VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHN 198
              + + +K       L L +++                     GD+  L+  ++   + 
Sbjct: 148 ATAIAEALKVNTRLTGLDLWENQ--------------------IGDDGALAIAEAFKVNT 187

Query: 199 ASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
                  + NQ  +   Q+   +LK    L EL L  N  G  G + +A+ L+ +    L
Sbjct: 188 TLTTLSLHQNQIGDAGAQAIAEALKVNKTLKELFLWRNQIGDAGAQAIAEALKVNKT--L 245

Query: 258 EELKLNNNGLGITGCKLLSK 277
           + L LN N L  TG   L +
Sbjct: 246 KTLFLNENFLTNTGINALRQ 265



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           LNL  N I   GA  + +AL    +L  L+L    +  A A +IA+ L  NTTL  +NL 
Sbjct: 25  LNLYQNQIGDPGAYTIAEALKVNKTLTALSLSGNQIGDAAARTIAEALKVNTTLIKLNLY 84

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N+I   G   + +A+K    L  +++S NQ G  G + M +++K
Sbjct: 85  QNQIGNAGATAIAEALKVNKTLTTLSLSGNQIGNVGAQVMAEVLK 129


>gi|297812113|ref|XP_002873940.1| RANGAP2 [Arabidopsis lyrata subsp. lyrata]
 gi|297319777|gb|EFH50199.1| RANGAP2 [Arabidopsis lyrata subsp. lyrata]
          Length = 543

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 13/236 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LS+NA G  GV     LL+S    +LEEL L N+G+     K  ++A+ +  
Sbjct: 211 GSILSSLNLSENALGEKGVRAFGALLKSLS--SLEELYLMNDGIS----KEAAQAVSELI 264

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++       L+V     N   +EGA  +A V K+   LE        +   G  ALS+
Sbjct: 265 PSTEN------LRVLHFHNNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGGIALSE 318

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A E   ++  L+L DN    +  + L + LS    L  L L    L+  GA +I   L +
Sbjct: 319 ALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHLTELYLSYLNLEDEGAIAIVNALKE 378

Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + + +E + +  N+I+V+    +   +  K  LK++N+SEN+  +EG  ++ K M+
Sbjct: 379 SASPIEVLEMAGNDITVEAASAIAACVAAKQDLKKLNLSENELKDEGCVQIAKSME 434



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/263 (20%), Positives = 114/263 (43%), Gaps = 15/263 (5%)

Query: 207 SNQSHNTSNQSHMSLKTGAR-LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
           S  S  +  ++   +  G R  +E D +D    P+   G A    +  CF+       N 
Sbjct: 111 SEDSSASPRETFFDISKGQRAFIEADEADELLKPLKEPGNA---YTKICFS-------NR 160

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
             G+   ++    L    +  K+    + L  F+AGR  +E      + +   +   L  
Sbjct: 161 SFGLGAARVAEPILASLKDQLKE----VDLSDFVAGRPEVEALEVMNIFSDALQGSILSS 216

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + + +N +   G+ A     +   +L  L L ++ I+ + A  + + +    +L +L+  
Sbjct: 217 LNLSENALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFH 276

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           + +    GA +IA+ +  +  LE+   +   +  +GG+ L +A+++ T ++++++ +N F
Sbjct: 277 NNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGGIALSEALEHCTHMEKLDLRDNMF 336

Query: 446 GEEGVEEMEKLMKSFGMAAALVL 468
           G E    + K + SF     L L
Sbjct: 337 GTEAGVSLSKTLSSFKHLTELYL 359



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K+   LE+       +   G  ALS+A E    +  L+L DN    +  + L + 
Sbjct: 288 IAEVVKRSPLLENFRCSSTRVGSEGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKT 347

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           LS    L  L L    L+  GA +I   L ++ + +E + +  N+I+V+    +   +  
Sbjct: 348 LSSFKHLTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAA 407

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  LK++N+SEN+  +EG  ++ K M+
Sbjct: 408 KQDLKKLNLSENELKDEGCVQIAKSME 434



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + + +N +   G+ A     +    L  L L ++ I+ + A  + + +    +L +L
Sbjct: 214 LSSLNLSENALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVL 273

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LE+   +   +  +GG+ L +A+++ T ++++++ +
Sbjct: 274 HFHNNMSGDEGALAIAEVVKRSPLLENFRCSSTRVGSEGGIALSEALEHCTHMEKLDLRD 333

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLE----DDEG 162
           N FG E    + K + SF     L L     +DEG
Sbjct: 334 NMFGTEAGVSLSKTLSSFKHLTELYLSYLNLEDEG 368



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 64/137 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             A+ K L +LE + +  +GI      A+S+     + LR L+ ++N    +GA+ + + 
Sbjct: 232 FGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMSGDEGALAIAEV 291

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P L         + S G  ++++ L   T +E ++L  N    + G+ L K + + 
Sbjct: 292 VKRSPLLENFRCSSTRVGSEGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSF 351

Query: 122 TKLKQINVSENQFGEEG 138
             L ++ +S     +EG
Sbjct: 352 KHLTELYLSYLNLEDEG 368



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 2/124 (1%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+ +A +E+   +  L +  N IT + A  +   ++    L  LNL +  LK  G  
Sbjct: 368 GAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLKKLNLSENELKDEGCV 427

Query: 85  SIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            IAK +  D++ L+ ++++ N I   G   L   +  K   K +N+  N   EEG+EE++
Sbjct: 428 QIAKSMEEDHSKLQYIDMSTNFIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGIEELK 487

Query: 144 KLMK 147
           ++ K
Sbjct: 488 EIFK 491


>gi|320167522|gb|EFW44421.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 739

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 6/171 (3%)

Query: 294 ALKV------FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
           ALKV       + G N++ + GA+ +    K  +TL  + + +N I   G  A++DA + 
Sbjct: 346 ALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLTELLLSENQIGDAGAQAVADALKV 405

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
           N +L  L+L+ N I+  GA  + +AL    +L  L L    + +AGA +IA+ LT NTTL
Sbjct: 406 NTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQAIAEALTKNTTL 465

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +++L+ N+I   G   + +A+K    + +I + EN  G  G + +   +K
Sbjct: 466 TELHLSTNQIGDAGAQAIAEALKMNAMVTEIGLRENHIGNAGAQAIADALK 516



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 75/138 (54%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + + +N I   G  A++DA + N  L  L+L+ N I+  GA  + +AL    +L 
Sbjct: 379 RTLTELLLSENQIGDAGAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLN 438

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L    + +AGA +IA+ LT NTTL +++L+ N+I   G   + +A+K    + +I +
Sbjct: 439 SLFLRQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIGL 498

Query: 130 SENQFGEEGVEEMEKLMK 147
            EN  G  G + +   +K
Sbjct: 499 RENHIGNAGAQAIADALK 516



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 85/168 (50%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           RL + GA+ +A   K    +  + + +N I   G  A+ +A + N+ L  L L++N I  
Sbjct: 334 RLGDAGAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLTELLLSENQIGD 393

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
            GA  +  AL    SL  L+L    +  AGA +IA+ L  +TTL  + L  N+I   G  
Sbjct: 394 AGAQAVADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQ 453

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
            + +A+   T L ++++S NQ G+ G + + + +K   M   + L ++
Sbjct: 454 AIAEALTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIGLREN 501



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   +L  + + QN I   G  A+++A   +  L  L L  N I   GA  + +A
Sbjct: 399 VADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQAIAEA 458

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+K  +L  L+L    +  AGA +IA+ L  N  + ++ L  N I   G   +  A+K  
Sbjct: 459 LTKNTTLTELHLSTNQIGDAGAQAIAEALKMNAMVTEIGLRENHIGNAGAQAIADALKVN 518

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L+ +N+S+N  G  GV  ++K  K
Sbjct: 519 TTLRYLNLSQNCIGSVGVRAIDKAHK 544



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 73/142 (51%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           +N I   G  A+ +A + N+ L  L L++N I   GA  +  AL    SL  L+L    +
Sbjct: 360 ENQIGDAGAQAIGEALKVNRTLTELLLSENQIGDAGAQAVADALKVNTSLTELSLDQNHI 419

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             AGA +IA+ L  +TTL  + L  N+I   G   + +A+   T L ++++S NQ G+ G
Sbjct: 420 SDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAG 479

Query: 139 VEEMEKLMKSFGMAAALVLEDD 160
            + + + +K   M   + L ++
Sbjct: 480 AQAIAEALKMNAMVTEIGLREN 501



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 12/187 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L EL LS+N  G  G + +AD L+ +   +L EL L+ N +   G + +++AL
Sbjct: 374 ALKVNRTLTELLLSENQIGDAGAQAVADALKVNT--SLTELSLDQNHISDAGAQAIAEAL 431

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                          L      +N++ N GA+ +A    K  TL  + +  N I   G  
Sbjct: 432 I----------VSTTLNSLFLRQNQIGNAGAQAIAEALTKNTTLTELHLSTNQIGDAGAQ 481

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + N  +  + L +N I   GA  +  AL    +L  LNL    + S G  +I K
Sbjct: 482 AIAEALKMNAMVTEIGLRENHIGNAGAQAIADALKVNTTLRYLNLSQNCIGSVGVRAIDK 541

Query: 400 YLTDNTT 406
               N T
Sbjct: 542 AHKGNNT 548



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 51/254 (20%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A+++A + N  +  L L +N I   GA  +G+AL    +L  L L +  +  AGA +
Sbjct: 339 GAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLTELLLSENQIGDAGAQA 398

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +A  L  NT+L +++L  N IS  G   + +A+   T L  + + +NQ G  G + +   
Sbjct: 399 VADALKVNTSLTELSLDQNHISDAGAQAIAEALIVSTTLNSLFLRQNQIGNAGAQAI--- 455

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
                                            ++A   N+ L+            + H 
Sbjct: 456 ---------------------------------AEALTKNTTLT------------ELHL 470

Query: 206 NSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
           ++NQ  +   Q+   +LK  A + E+ L +N  G  G + +AD L+ +    L  L L+ 
Sbjct: 471 STNQIGDAGAQAIAEALKMNAMVTEIGLRENHIGNAGAQAIADALKVNTT--LRYLNLSQ 528

Query: 265 NGLGITGCKLLSKA 278
           N +G  G + + KA
Sbjct: 529 NCIGSVGVRAIDKA 542



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 124/320 (38%), Gaps = 77/320 (24%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           L  AGA +IA+ L  NT +  + L  N+I   G   + +A+K    L ++ +SENQ G+ 
Sbjct: 335 LGDAGAQAIAEALKVNTGVTTLVLGENQIGDAGAQAIGEALKVNRTLTELLLSENQIGDA 394

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH--NDSNH 195
           G + +                                    +DA   N++L+    D NH
Sbjct: 395 GAQAV------------------------------------ADALKVNTSLTELSLDQNH 418

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
             +A  Q+                +L     L  L L  N  G  G + +A+ L  +   
Sbjct: 419 ISDAGAQAIAE-------------ALIVSTTLNSLFLRQNQIGNAGAQAIAEALTKNTT- 464

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            L EL L+ N +G  G + +++AL           + + L+      N + N GA+ +A 
Sbjct: 465 -LTELHLSTNQIGDAGAQAIAEAL-----KMNAMVTEIGLR-----ENHIGNAGAQAIAD 513

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI-PLGQALS 374
             K   TL  + + QN I  VG+ A+  A + N        N + I   G I PL    S
Sbjct: 514 ALKVNTTLRYLNLSQNCIGSVGVRAIDKAHKGN--------NTHAIRIDGQISPL--VFS 563

Query: 375 KLPSLAI---LNLGDCLLKS 391
            LP  A    +    CLL S
Sbjct: 564 TLPRFATAEEIQTVFCLLTS 583



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 337 GITALSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
           G   +++A +E N +L  L+L  N I   GA  + +AL       + +L    +   GA 
Sbjct: 10  GAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQIGDVGAQ 69

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           ++A  L  ++T++++ LT N+I   G   + +A++  T L  +N+  N  G  GV+ +E+
Sbjct: 70  ALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSVGVQAIEE 129

Query: 456 LMK 458
             K
Sbjct: 130 ARK 132



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G   +++A +E N  L  L+L  N I   GA  + +AL       + +L    +   GA 
Sbjct: 10  GAEVIAEALKEVNTSLTGLSLYQNQIGDAGARAIAEALRLTAEAGMGSLYQNQIGDVGAQ 69

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           ++A  L  ++T++++ LT N+I   G   + +A++  T L  +N+  N  G  GV+ +E+
Sbjct: 70  ALADALKVSSTVKELLLTQNQIGNDGVQAIAEALQMNTTLTYLNLQSNCIGSVGVQAIEE 129

Query: 145 LMK 147
             K
Sbjct: 130 ARK 132


>gi|302851229|ref|XP_002957139.1| hypothetical protein VOLCADRAFT_107530 [Volvox carteri f.
           nagariensis]
 gi|300257546|gb|EFJ41793.1| hypothetical protein VOLCADRAFT_107530 [Volvox carteri f.
           nagariensis]
          Length = 468

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 42/277 (15%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L +  RL  L+LSDNA G  GV     +L       LE L L N GL +  C+  S+ L
Sbjct: 165 ALSSAPRLTALNLSDNALGEKGVRACEAVLAGKA--PLESLSLQNVGLSVHACRATSELL 222

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            D     +       L++F    N   +EGA  +A +  +   LE +    + +   G  
Sbjct: 223 ADPSRLRR-------LQLF---NNMSGDEGAGHIAGLLSRAPQLEDLRFASSRVGPAGGV 272

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS--SI 397
           AL+ +      L  L+L+DN +T +    L +AL+  P+L  LNL D  L   G +    
Sbjct: 273 ALAKSLMAGARLVRLDLSDNPLTSEVVPELAKALAAQPTLRALNLNDTSLGPDGVTEAVA 332

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM---------------------------- 429
           A  +   ++L  +NL  NE+  +G L L +A+                            
Sbjct: 333 ALVVAHASSLRLLNLRENELGDRGALFLSRALGALAEPQTVDLVGNQIRRAGAVAVARAL 392

Query: 430 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
            +K+ L+ + + EN   ++G++E+  +M+  G +AAL
Sbjct: 393 VSKSSLELLALDENTISDDGLDELRGVMEGAGKSAAL 429



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 64/138 (46%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           AV      LE + +   G+      A S+   +  +LR L L +N    +GA  +   LS
Sbjct: 192 AVLAGKAPLESLSLQNVGLSVHACRATSELLADPSRLRRLQLFNNMSGDEGAGHIAGLLS 251

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           + P L  L      +  AG  ++AK L     L  ++L+ N ++ +   +L KA+  +  
Sbjct: 252 RAPQLEDLRFASSRVGPAGGVALAKSLMAGARLVRLDLSDNPLTSEVVPELAKALAAQPT 311

Query: 124 LKQINVSENQFGEEGVEE 141
           L+ +N+++   G +GV E
Sbjct: 312 LRALNLNDTSLGPDGVTE 329



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 32/163 (19%)

Query: 27  ITALSDAFEENKKLRHLNLNDNTITYKG-----AIPLGQALSKLPSLAILNLG----DCL 77
           +  LS A     +L  LNL+DN +  KG     A+  G+A   L SL++ N+G     C 
Sbjct: 159 LRVLSSALSSAPRLTALNLSDNALGEKGVRACEAVLAGKA--PLESLSLQNVGLSVHACR 216

Query: 78  LKSA---------------------GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
             S                      GA  IA  L+    LED+    + +   GG+ L K
Sbjct: 217 ATSELLADPSRLRRLQLFNNMSGDEGAGHIAGLLSRAPQLEDLRFASSRVGPAGGVALAK 276

Query: 117 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           ++    +L ++++S+N    E V E+ K + +     AL L D
Sbjct: 277 SLMAGARLVRLDLSDNPLTSEVVPELAKALAAQPTLRALNLND 319



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 32/163 (19%)

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKG-----AIPLGQALSKLPSLAILNLG----DCL 388
           +  LS A      L  LNL+DN +  KG     A+  G+A   L SL++ N+G     C 
Sbjct: 159 LRVLSSALSSAPRLTALNLSDNALGEKGVRACEAVLAGKA--PLESLSLQNVGLSVHACR 216

Query: 389 LKSA---------------------GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
             S                      GA  IA  L+    LED+    + +   GG+ L K
Sbjct: 217 ATSELLADPSRLRRLQLFNNMSGDEGAGHIAGLLSRAPQLEDLRFASSRVGPAGGVALAK 276

Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           ++    +L ++++S+N    E V E+ K + +     AL L D
Sbjct: 277 SLMAGARLVRLDLSDNPLTSEVVPELAKALAAQPTLRALNLND 319



 Score = 41.6 bits (96), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 2/146 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAI--PLGQALSKLPSLA 69
           L  +++  N +    +  L+ A      LR LNLND ++   G         ++   SL 
Sbjct: 284 LVRLDLSDNPLTSEVVPELAKALAAQPTLRALNLNDTSLGPDGVTEAVAALVVAHASSLR 343

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           +LNL +  L   GA  +++ L      + V+L  N+I   G + + +A+ +K+ L+ + +
Sbjct: 344 LLNLRENELGDRGALFLSRALGALAEPQTVDLVGNQIRRAGAVAVARALVSKSSLELLAL 403

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAAL 155
            EN   ++G++E+  +M+  G +AAL
Sbjct: 404 DENTISDDGLDELRGVMEGAGKSAAL 429


>gi|356500208|ref|XP_003518925.1| PREDICTED: RAN GTPase-activating protein 1-like [Glycine max]
          Length = 533

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LS+NA G  GV     LL+S    +LEEL L N+G+     K +S+ L    
Sbjct: 212 GSVLRYLNLSNNAMGEKGVRAFRSLLKSQT--SLEELYLMNDGISEEAAKAVSELL---- 265

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      L+V     N   +EGA  +A + K    LE        +   G  AL++
Sbjct: 266 PSTEK------LRVLHFHNNMTGDEGAIAIAEIVKHSPALEDFRCSSTRVGSDGGVALAE 319

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A    K+LR L+L DN    +  + L + +     L  + L    L+  GA ++A  L +
Sbjct: 320 ALGACKHLRKLDLRDNMFGEEAGVALSKVIPAFTDLTEIYLSYLNLEDDGAEALANALKE 379

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +  +LE ++L  N+I+ +    +   + +K  L ++N+SEN+  +EG
Sbjct: 380 SAPSLEILDLAGNDITAKASASVAACISSKQFLTKLNLSENELKDEG 426



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 13/266 (4%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A     +    L  L L ++ I+ + A  + + L     L +
Sbjct: 214 VLRYLNLSNNAMGEKGVRAFRSLLKSQTSLEELYLMNDGISEEAAKAVSELLPSTEKLRV 273

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA+ +  +  LED   +   +   GG+ L +A+     L+++++ 
Sbjct: 274 LHFHNNMTGDEGAIAIAEIVKHSPALEDFRCSSTRVGSDGGVALAEALGACKHLRKLDLR 333

Query: 131 ENQFGEEGVEEMEKLMKSFG-----MAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
           +N FGEE    + K++ +F        + L LEDD  E       E +      D  G++
Sbjct: 334 DNMFGEEAGVALSKVIPAFTDLTEIYLSYLNLEDDGAEALANALKESAPSLEILDLAGND 393

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGA------RLVELDLSDNAFGP 239
                + S  +  +S Q     N S N        L + A      +L+E+DLS N+   
Sbjct: 394 ITAKASASVAACISSKQFLTKLNLSENELKDEGAVLISKALEGGHGQLIEVDLSTNSITW 453

Query: 240 IGVEGLADLLRSSCCFALEELKLNNN 265
            G + +A+ +     F L  L +N N
Sbjct: 454 SGAKLVAEAVVGKPGFKL--LNINAN 477



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 4/165 (2%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           FIAGR   E E  +++      L+   L  + +  N +   G+ A     +   +L  L 
Sbjct: 190 FIAGRP--EAEALEVMTIFSSALEGSVLRYLNLSNNAMGEKGVRAFRSLLKSQTSLEELY 247

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L ++ I+ + A  + + L     L +L+  + +    GA +IA+ +  +  LED   +  
Sbjct: 248 LMNDGISEEAAKAVSELLPSTEKLRVLHFHNNMTGDEGAIAIAEIVKHSPALEDFRCSST 307

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
            +   GG+ L +A+     L+++++ +N FGEE    + K++ +F
Sbjct: 308 RVGSDGGVALAEALGACKHLRKLDLRDNMFGEEAGVALSKVIPAF 352



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL++A +E+   L  L+L  N IT K +  +   +S    L  LNL +  LK  GA 
Sbjct: 369 GAEALANALKESAPSLEILDLAGNDITAKASASVAACISSKQFLTKLNLSENELKDEGAV 428

Query: 85  SIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            I+K L   +  L +V+L+ N I+  G   + +A+  K   K +N++ N   +EG++E++
Sbjct: 429 LISKALEGGHGQLIEVDLSTNSITWSGAKLVAEAVVGKPGFKLLNINANFISDEGIDELK 488

Query: 144 KLMK 147
            + K
Sbjct: 489 NIFK 492


>gi|297843864|ref|XP_002889813.1| EMB2004 [Arabidopsis lyrata subsp. lyrata]
 gi|297335655|gb|EFH66072.1| EMB2004 [Arabidopsis lyrata subsp. lyrata]
          Length = 605

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 177/449 (39%), Gaps = 64/449 (14%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +T+E V    NGI   G+ A     + N  L+ LNL+ N I  +GA  L   L +  S+ 
Sbjct: 198 QTVEEVSFSANGITAAGVKAFDGVLQSNIMLKVLNLSGNPIGDEGAKTLCATLMENSSIE 257

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           IL L    +   GA  IA+ L  N+TL  + L  N I   G   L  A+     ++ +++
Sbjct: 258 ILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHL 317

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N  G  G   + K +              EG  S  E         D       + LS
Sbjct: 318 NGNYGGALGANALAKGL--------------EGNKSLRELHLHGNSIGDEGTRALMAGLS 363

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                 SH                            +L  LDL +N+    G   +A+ +
Sbjct: 364 ------SHK--------------------------GKLALLDLGNNSISAKGAFYVAEYI 391

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           + S       L +N+  +G  G + ++ AL        K+   +A      G N +  EG
Sbjct: 392 KRSKSLVWLNLYMND--IGDEGAEKIADAL--------KQNRSIA--TIDLGGNNIHAEG 439

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
              +A   K    +  +E+  N I   G  ALS+  + + N++ L L    I  KGA  +
Sbjct: 440 VNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAEHV 499

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKA 428
              L    ++++L+L    L+  GAS +A+ L   N  L  V+L  NEI   G   + +A
Sbjct: 500 ADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQA 559

Query: 429 MK--NKTKLKQINVSEN---QFGEEGVEE 452
           +K      +  IN+  N   +FG+  + +
Sbjct: 560 LKANEDVTVTSINLGNNFITKFGQSALTD 588



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 165/384 (42%), Gaps = 33/384 (8%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           + +AG  +    L  N  L+ +NL+ N I  +G   L   +   + ++ + ++    G+E
Sbjct: 210 ITAAGVKAFDGVLQSNIMLKVLNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDE 269

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G +E+ +L+K       + L ++  + S       +  EN                    
Sbjct: 270 GAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLEN-------------------- 309

Query: 198 NASNQSHNNSNQSHNT-SNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
           N     H N N      +N     L+    L EL L  N+ G  G   L   L SS    
Sbjct: 310 NTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGL-SSHKGK 368

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L  L L NN +   G   ++       E  K+  S + L +++   N + +EGA+ +A  
Sbjct: 369 LALLDLGNNSISAKGAFYVA-------EYIKRSKSLVWLNLYM---NDIGDEGAEKIADA 418

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            K+ +++  +++  N I+  G+ A++ A ++N  +  L +  N I   GA  L + L   
Sbjct: 419 LKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFH 478

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-L 435
            ++  L LG C + + GA  +A  L  N T+  ++L  N +  +G   L +++K   + L
Sbjct: 479 GNVKTLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEAL 538

Query: 436 KQINVSENQFGEEGVEEMEKLMKS 459
             +++  N+  ++G   + + +K+
Sbjct: 539 TSVDLGFNEIRDDGAFAIAQALKA 562



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 174/401 (43%), Gaps = 42/401 (10%)

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           +L S   +++  C     G   +A+ L  N T+E+V+ + N I+  G       +++   
Sbjct: 168 ELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIM 227

Query: 124 LKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
           LK +N+S N  G+EG + +   LM++   ++  +L+ +  +  DE   E +E        
Sbjct: 228 LKVLNLSGNPIGDEGAKTLCATLMEN---SSIEILQLNSTDIGDEGAKEIAELLKR---- 280

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARL-----VELDLSDNAF 237
             NS L   + N+                N  + S  +   GA L       L L+ N  
Sbjct: 281 --NSTLRIIELNN----------------NMIDYSGFTSLAGALLENNTIRNLHLNGNYG 322

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
           G +G   LA  L  +   +L EL L+ N +G  G + L   L      S  +G    L +
Sbjct: 323 GALGANALAKGLEGNK--SLRELHLHGNSIGDEGTRALMAGL------SSHKGK---LAL 371

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
              G N +  +GA  +A   K+ K+L  + +  N I   G   ++DA ++N+++  ++L 
Sbjct: 372 LDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADALKQNRSIATIDLG 431

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N I  +G   + QAL     +  L +G   +   GA ++++ L  +  ++ + L   +I
Sbjct: 432 GNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQI 491

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + +G   +   ++    +  +++  N   +EG   + + +K
Sbjct: 492 AAKGAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLK 532



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 69/290 (23%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           E+  S N     GV+    +L+S+    L+ L L+ N +G  G K L   L    E+S  
Sbjct: 202 EVSFSANGITAAGVKAFDGVLQSNIM--LKVLNLSGNPIGDEGAKTLCATL---MENS-- 254

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF--- 345
                ++++       + +EGAK +A + K+  TL  +E+  N I + G T+L+ A    
Sbjct: 255 -----SIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLEN 309

Query: 346 -------------------------EENKNLRHLNLN----------------------- 357
                                    E NK+LR L+L+                       
Sbjct: 310 NTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKL 369

Query: 358 ------DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
                 +N+I+ KGA  + + + +  SL  LNL    +   GA  IA  L  N ++  ++
Sbjct: 370 ALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADALKQNRSIATID 429

Query: 412 LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           L  N I  +G   + +A+K+   +  + V  N  G +G + + +++K  G
Sbjct: 430 LGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHG 479



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 165/380 (43%), Gaps = 45/380 (11%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L A   +  ++E +++    I   G   +++  + N  LR + LN+N I Y G   L  A
Sbjct: 246 LCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGA 305

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN- 120
           L +  ++  L+L      + GA+++AK L  N +L +++L  N I  +G   L+  + + 
Sbjct: 306 LLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSH 365

Query: 121 KTKLKQINVSENQFGEEG---VEEMEKLMKSFGMAAALVLED--DEGECSDEEQDEESEE 175
           K KL  +++  N    +G   V E  K  KS  +   L + D  DEG     E+  ++ +
Sbjct: 366 KGKLALLDLGNNSISAKGAFYVAEYIKRSKSL-VWLNLYMNDIGDEG----AEKIADALK 420

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
           +N S A  D   L  N+  H+                  N    +LK  A +  L++  N
Sbjct: 421 QNRSIATID---LGGNNI-HAEGV---------------NAIAQALKDNAIITTLEVGYN 461

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
             GP G + L+++L+            N   L +  C++ +K      +  +   +   +
Sbjct: 462 PIGPDGAKALSEILK---------FHGNVKTLKLGWCQIAAKGAEHVADMLRYNNT---I 509

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--LR 352
            V     N L +EGA  LA   K + + L  V++  N I   G  A++ A + N++  + 
Sbjct: 510 SVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQALKANEDVTVT 569

Query: 353 HLNLNDNTITYKGAIPLGQA 372
            +NL +N IT  G   L  A
Sbjct: 570 SINLGNNFITKFGQSALTDA 589


>gi|356575811|ref|XP_003556030.1| PREDICTED: RAN GTPase-activating protein 2-like [Glycine max]
          Length = 532

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 51/283 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGL----GITGCKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S  C  LEEL L N+G+     +  C+L+    
Sbjct: 210 GSVLRSLNLSDNALGEKGVRAFGALLKSQKC--LEELYLMNDGISKEAALAVCELIPFTE 267

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG   L+        L+
Sbjct: 268 KLKVLHFHNNMTGDEGALAIAEVVKRSPL-LEDFRCSSTRIGSEGGVALSDALGNCAHLK 326

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL-PSLAIL- 382
           ++++  N +   G  +LS A  +   LR + L+   +   GAI +  AL++  P L +L 
Sbjct: 327 KLDLRDNMLGVEGGVSLSKALTKQAELREVYLSYLNLEDDGAIAIVDALTEAAPHLEVLE 386

Query: 383 ---------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
                                      NL +  LK  GA+ I K +  +  L++++L+ N
Sbjct: 387 MSGNDITADAAPAIAACLAAKQFLTKLNLSENELKDEGANLITKAIEGHVQLKEIDLSAN 446

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +IS  G   L   +  K   K +N++ N   +EG++E++ + K
Sbjct: 447 QISRAGAQQLAVTVVQKADFKLLNINGNFISDEGIDELKDIFK 489



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 91/229 (39%), Gaps = 58/229 (25%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K+   LE        I   G  ALSDA      L+ L+L DN +  +G + L +A
Sbjct: 287 IAEVVKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLRDNMLGVEGGVSLSKA 346

Query: 62  LSK-----------------------------LPSLAIL--------------------- 71
           L+K                              P L +L                     
Sbjct: 347 LTKQAELREVYLSYLNLEDDGAIAIVDALTEAAPHLEVLEMSGNDITADAAPAIAACLAA 406

Query: 72  -------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
                  NL +  LK  GA+ I K +  +  L++++L+ N+IS  G   L   +  K   
Sbjct: 407 KQFLTKLNLSENELKDEGANLITKAIEGHVQLKEIDLSANQISRAGAQQLAVTVVQKADF 466

Query: 125 KQINVSENQFGEEGVEEMEKLM-KSFGMAAALVLEDDEGECSDEEQDEE 172
           K +N++ N   +EG++E++ +  KS  M   L   D +G  +DEE DEE
Sbjct: 467 KLLNINGNFISDEGIDELKDIFKKSPDMLGPLDENDPDGIDNDEESDEE 515



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 15/232 (6%)

Query: 219 MSLKTGAR-LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
             +  G R  +E D ++    P+   G +    +  CF+       N   G+   ++   
Sbjct: 122 FDISKGQRAFIEADETEQLLSPLKEPGNS---YTKICFS-------NRSFGLGAAQIAEP 171

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
            L     S K +   + L  FIAGR+  E      + +   +   L  + +  N +   G
Sbjct: 172 ILT----SIKDQLKEVDLSDFIAGRSEAEALDVMKIFSTALEGSVLRSLNLSDNALGEKG 227

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
           + A     +  K L  L L ++ I+ + A+ + + +     L +L+  + +    GA +I
Sbjct: 228 VRAFGALLKSQKCLEELYLMNDGISKEAALAVCELIPFTEKLKVLHFHNNMTGDEGALAI 287

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           A+ +  +  LED   +   I  +GG+ L  A+ N   LK++++ +N  G EG
Sbjct: 288 AEVVKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLRDNMLGVEG 339



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 65/129 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             A+ K  K LE + +  +GI      A+ +     +KL+ L+ ++N    +GA+ + + 
Sbjct: 231 FGALLKSQKCLEELYLMNDGISKEAALAVCELIPFTEKLKVLHFHNNMTGDEGALAIAEV 290

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P L         + S G  +++  L +   L+ ++L  N + V+GG+ L KA+  +
Sbjct: 291 VKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLRDNMLGVEGGVSLSKALTKQ 350

Query: 122 TKLKQINVS 130
            +L+++ +S
Sbjct: 351 AELREVYLS 359



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 61/128 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L  + +  N +   G+ A     +  K L  L L ++ I+ + A+ + + +     L +
Sbjct: 212 VLRSLNLSDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAALAVCELIPFTEKLKV 271

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA+ +  +  LED   +   I  +GG+ L  A+ N   LK++++ 
Sbjct: 272 LHFHNNMTGDEGALAIAEVVKRSPLLEDFRCSSTRIGSEGGVALSDALGNCAHLKKLDLR 331

Query: 131 ENQFGEEG 138
           +N  G EG
Sbjct: 332 DNMLGVEG 339


>gi|357139672|ref|XP_003571403.1| PREDICTED: RAN GTPase-activating protein 1-like [Brachypodium
           distachyon]
          Length = 539

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L++SDNA G  GV    +LL+S     LEE  + N+G+     K LS+ +    
Sbjct: 210 GSVLRYLNISDNALGEKGVRAFEELLKSQD--NLEEFSVMNDGISEEAAKALSELIP--- 264

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                  S   LKV     N   +EGA  +A + K+   LE        I   G  AL++
Sbjct: 265 -------STEILKVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAE 317

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN    +  I L + L KLP L  L L D  L++ G  +IA  L  
Sbjct: 318 ALGTCTRLKKLDLRDNLFGVEAGIALSKTLPKLPDLVELYLSDLNLENKGTIAIANALKQ 377

Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +   LE + +  NEI+ +    L + +     LK++ ++EN+  + G
Sbjct: 378 SAPRLEVLEMAGNEITAKATQALAECLTVMQSLKKLTLAENELEDRG 424



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 8/211 (3%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            +N   GI    +    L    ES KK+ + + +  F+AGR   E+E   ++    K L+
Sbjct: 156 FSNRSFGIDAANVAGPIL----ESIKKQITEVDISDFVAGRP--EDEALDVMRIFSKALE 209

Query: 322 --TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N +   G+ A  +  +   NL   ++ ++ I+ + A  L + +     L
Sbjct: 210 GSVLRYLNISDNALGEKGVRAFEELLKSQDNLEEFSVMNDGISEEAAKALSELIPSTEIL 269

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L+  + +    GA SIA+ +  ++ LE    +   I   GG+ L +A+   T+LK+++
Sbjct: 270 KVLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAEALGTCTRLKKLD 329

Query: 440 VSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           + +N FG E    + K +        L L D
Sbjct: 330 LRDNLFGVEAGIALSKTLPKLPDLVELYLSD 360



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 80/149 (53%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A+++A +++  +L  L +  N IT K    L +
Sbjct: 343 LSKTLPKLPDLVELYLSDLNLENKGTIAIANALKQSAPRLEVLEMAGNEITAKATQALAE 402

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  L+  GA  IAK L ++   L++++++ N +   G     +A+ 
Sbjct: 403 CLTVMQSLKKLTLAENELEDRGAVVIAKTLENSHPDLKELDVSTNMLRRAGARCFAQAIA 462

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           +K    Q+N++ N   +EG+EE++K++KS
Sbjct: 463 DKPGFVQLNINGNFISDEGIEEVKKILKS 491



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   LE        I   G  AL++A     +L+ L+L DN    +  I L + 
Sbjct: 287 IAEMVKRSSNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAGIALSKT 346

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           L KLP L  L L D  L++ G  +IA  L  +   LE + +  NEI+ +    L + +  
Sbjct: 347 LPKLPDLVELYLSDLNLENKGTIAIANALKQSAPRLEVLEMAGNEITAKATQALAECLTV 406

Query: 121 KTKLKQINVSENQFGEEG 138
              LK++ ++EN+  + G
Sbjct: 407 MQSLKKLTLAENELEDRG 424



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 140/349 (40%), Gaps = 83/349 (23%)

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA-- 181
           L+ +N+S+N  GE+GV   E+L+KS        + +D    S+E     SE    ++   
Sbjct: 213 LRYLNISDNALGEKGVRAFEELLKSQDNLEEFSVMNDG--ISEEAAKALSELIPSTEILK 270

Query: 182 --------EGDNSNLSHND-SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDL 232
                    GD   LS  +    S N  +   + +    +       +L T  RL +LDL
Sbjct: 271 VLHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDL 330

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
            DN F   GVE                        GI   K L K L D  E        
Sbjct: 331 RDNLF---GVEA-----------------------GIALSKTLPK-LPDLVE-------- 355

Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
               ++++  N LEN+G   +A   K+    LE +EM  N I      AL++     ++L
Sbjct: 356 ----LYLSDLN-LENKGTIAIANALKQSAPRLEVLEMAGNEITAKATQALAECLTVMQSL 410

Query: 352 RHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           + L L +N +  +GA+ + + L +  P L  L++   +L+ AGA   A+ + D       
Sbjct: 411 KKLTLAENELEDRGAVVIAKTLENSHPDLKELDVSTNMLRRAGARCFAQAIAD------- 463

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                                K    Q+N++ N   +EG+EE++K++KS
Sbjct: 464 ---------------------KPGFVQLNINGNFISDEGIEEVKKILKS 491



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 68/149 (45%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A  +  +    L   ++ ++ I+ + A  L + +     L +
Sbjct: 212 VLRYLNISDNALGEKGVRAFEELLKSQDNLEEFSVMNDGISEEAAKALSELIPSTEILKV 271

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA SIA+ +  ++ LE    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 272 LHFHNNMTGDEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLR 331

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           +N FG E    + K +        L L D
Sbjct: 332 DNLFGVEAGIALSKTLPKLPDLVELYLSD 360


>gi|255077966|ref|XP_002502563.1| predicted protein [Micromonas sp. RCC299]
 gi|226517828|gb|ACO63821.1| predicted protein [Micromonas sp. RCC299]
          Length = 424

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 111/248 (44%), Gaps = 16/248 (6%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A++  +DLSDNAFG  GV     +L+      +EE+   NNG+          +      
Sbjct: 106 AKITSVDLSDNAFGEKGVRACTKMLQQQS--GIEEISFMNNGI----------SEQAAAA 153

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
             +   SP +LK F   +N   ++G   +  + +K   ++  +M  +     G   L+  
Sbjct: 154 ILELLASPQSLKKFHLDKNMTGDDGTAHVGKLLEKAPGMQDFKMAGSRFTSEGAKFLAKG 213

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
                +L  L+L DN +  +G   L   L K P+L  +NL    L    A  +A+ L   
Sbjct: 214 LSAGASLVKLDLTDNNVNEEGGFALAGMLFKQPNLKHVNLEATSLGPKAAIQVAQALASG 273

Query: 405 TT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 463
              LE +NL   +I+ +G   + +A+     LK + +SEN+ G+ GV ++   +K   MA
Sbjct: 274 CPQLEYLNLNACDITPEGVPQVAQAISAMKNLKTLKISENELGDLGVAQICVALK---MA 330

Query: 464 AALVLEDD 471
              V+E D
Sbjct: 331 GCPVVELD 338



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 34/243 (13%)

Query: 245 LADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR-- 302
           LA L+     F+  ++KL+    GI   K+++KA  +   + K+    + L   IAGR  
Sbjct: 36  LAPLMAKGASFS--KVKLSTKSFGIDAAKVVTKAFANIASTLKE----VDLSDIIAGRPE 89

Query: 303 --------------------------NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
                                     N    +G +    + ++   +E +    NGI   
Sbjct: 90  EEALKAMEIITEATLCAKITSVDLSDNAFGEKGVRACTKMLQQQSGIEEISFMNNGISEQ 149

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
              A+ +     ++L+  +L+ N     G   +G+ L K P +    +      S GA  
Sbjct: 150 AAAAILELLASPQSLKKFHLDKNMTGDDGTAHVGKLLEKAPGMQDFKMAGSRFTSEGAKF 209

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           +AK L+   +L  ++LT N ++ +GG  L   +  +  LK +N+     G +   ++ + 
Sbjct: 210 LAKGLSAGASLVKLDLTDNNVNEEGGFALAGMLFKQPNLKHVNLEATSLGPKAAIQVAQA 269

Query: 457 MKS 459
           + S
Sbjct: 270 LAS 272



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 30/176 (17%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLA 69
           +L  +++  N +   G  AL+    +   L+H+NL   ++  K AI + QAL S  P L 
Sbjct: 219 SLVKLDLTDNNVNEEGGFALAGMLFKQPNLKHVNLEATSLGPKAAIQVAQALASGCPQLE 278

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK---------- 119
            LNL  C +   G   +A+ ++    L+ + ++ NE+   G   +  A+K          
Sbjct: 279 YLNLNACDITPEGVPQVAQAISAMKNLKTLKISENELGDLGVAQICVALKMAGCPVVELD 338

Query: 120 -------------------NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
                              ++     +N+  N   +EGVEE++ +M+  G+A+AL+
Sbjct: 339 VSTNELVEKGAVAAAKLAASRAGFTSLNLDGNYISDEGVEEVKSIMEGAGIASALM 394



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 4/157 (2%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + +K   ++  +M  +     G   L+        L  L+L DN +  +G   L   L K
Sbjct: 185 LLEKAPGMQDFKMAGSRFTSEGAKFLAKGLSAGASLVKLDLTDNNVNEEGGFALAGMLFK 244

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTK 123
            P+L  +NL    L    A  +A+ L      LE +NL   +I+ +G   + +A+     
Sbjct: 245 QPNLKHVNLEATSLGPKAAIQVAQALASGCPQLEYLNLNACDITPEGVPQVAQAISAMKN 304

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
           LK + +SEN+ G+ GV ++   +K   MA   V+E D
Sbjct: 305 LKTLKISENELGDLGVAQICVALK---MAGCPVVELD 338



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 60/137 (43%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +E +    NGI      A+ +     + L+  +L+ N     G   +G+ L K P +   
Sbjct: 136 IEEISFMNNGISEQAAAAILELLASPQSLKKFHLDKNMTGDDGTAHVGKLLEKAPGMQDF 195

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +      S GA  +AK L+   +L  ++LT N ++ +GG  L   +  +  LK +N+  
Sbjct: 196 KMAGSRFTSEGAKFLAKGLSAGASLVKLDLTDNNVNEEGGFALAGMLFKQPNLKHVNLEA 255

Query: 132 NQFGEEGVEEMEKLMKS 148
              G +   ++ + + S
Sbjct: 256 TSLGPKAAIQVAQALAS 272


>gi|72390946|ref|XP_845767.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62175808|gb|AAX69935.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802303|gb|AAZ12208.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 448

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 15/240 (6%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  LD+S N  GP G + +A L+    C  LE ++L  N LG  G       + +   + 
Sbjct: 179 LTSLDISLNEIGPGGAKPIAKLIEGPECV-LECVQLYGNRLGPEG-------VSEILAAV 230

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS-DAF 345
           KK  S   +K    G N   +  A  LAA+ ++  +LER+++  N +    +   + D  
Sbjct: 231 KKNRS---IKQLTLGNNHATDAVAADLAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGL 287

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQAL--SKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            +N  LR L L  N +   G   + QAL  S++  L+ L+L  C L   G   IA  +  
Sbjct: 288 AQNSVLRSLCLAGNPLDSIGGEDISQALILSQVTVLSHLDLSSCQLGPIGGMRIANLIGT 347

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 462
           ++T+ DVNL+ N++  +    L  ++ N   +  +N+S N+ GE     + E   ++F M
Sbjct: 348 SSTITDVNLSDNKLDDEASASLANSILNGVSISSLNLSANEIGEWSASNLIEATQRNFRM 407



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALS-DAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LAA+ ++  +LE +++  N +    +   + D   +N  LR L L  N +   G   + Q
Sbjct: 254 LAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGLAQNSVLRSLCLAGNPLDSIGGEDISQ 313

Query: 61  AL--SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           AL  S++  L+ L+L  C L   G   IA  +  ++T+ DVNL+ N++  +    L  ++
Sbjct: 314 ALILSQVTVLSHLDLSSCQLGPIGGMRIANLIGTSSTITDVNLSDNKLDDEASASLANSI 373

Query: 119 KNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 151
            N   +  +N+S N+ GE     + E   ++F M
Sbjct: 374 LNGVSISSLNLSANEIGEWSASNLIEATQRNFRM 407



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 1/129 (0%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N +   G  ALS+    + NLR L+L  N +T +    L +A++   SL  L LG   L 
Sbjct: 103 NDVGREGCDALSNIVSISVNLRLLDLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLG 162

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEG 449
             GA+ +A+ L  NT L  ++++ NEI   G   + K ++  +  L+ + +  N+ G EG
Sbjct: 163 PEGAALLARKLEKNTYLTSLDISLNEIGPGGAKPIAKLIEGPECVLECVQLYGNRLGPEG 222

Query: 450 VEEMEKLMK 458
           V E+   +K
Sbjct: 223 VSEILAAVK 231



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N +   G  ALS+    +  LR L+L  N +T +    L +A++   SL  L LG   L 
Sbjct: 103 NDVGREGCDALSNIVSISVNLRLLDLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLG 162

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEG 138
             GA+ +A+ L  NT L  ++++ NEI   G   + K ++  +  L+ + +  N+ G EG
Sbjct: 163 PEGAALLARKLEKNTYLTSLDISLNEIGPGGAKPIAKLIEGPECVLECVQLYGNRLGPEG 222

Query: 139 VEEMEKLMK 147
           V E+   +K
Sbjct: 223 VSEILAAVK 231


>gi|15229383|ref|NP_191872.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|334186220|ref|NP_001190166.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|75334877|sp|Q9LE82.1|RAGP1_ARATH RecName: Full=RAN GTPase-activating protein 1; Short=AtRanGAP1;
           Short=RanGAP1
 gi|6708466|gb|AAF25947.1|AF214559_1 RAN GTPase activating protein 1 [Arabidopsis thaliana]
 gi|7573442|emb|CAB87758.1| RAN GTPase activating protein 1 protein [Arabidopsis thaliana]
 gi|14334454|gb|AAK59425.1| putative RAN GTPase activating protein 1 protein [Arabidopsis
           thaliana]
 gi|23297534|gb|AAN12889.1| putative RAN GTPase activating protein 1 protein [Arabidopsis
           thaliana]
 gi|332646917|gb|AEE80438.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
 gi|332646918|gb|AEE80439.1| RAN GTPase-activating protein 1 [Arabidopsis thaliana]
          Length = 535

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G++L  L+LSDNA G  G+   A L+ S     LEEL L N+G+        ++A+ +  
Sbjct: 208 GSKLRYLNLSDNALGEKGIRAFASLINSQ--HDLEELYLMNDGISEDA----ARAVRELL 261

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S+ K      ++V     N   +EGA  +A + ++  +LE        I   G  AL++
Sbjct: 262 PSTDK------IRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAE 315

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKL--------------------------- 376
           A E   +L+ L+L DN    +G I L + LS L                           
Sbjct: 316 ALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLK 375

Query: 377 --PSLAIL-------------NLGDCL---------------LKSAGASSIAKYLTDNTT 406
             PSL +L             NL  C+               LK  G   IAK +  +  
Sbjct: 376 SAPSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQ 435

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+L+ N I   G   L + +  K   K +N++ N   EEG++E+  + K
Sbjct: 436 LVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFISEEGIDEVNDMFK 487



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 12/283 (4%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L ++ +  N +   GI A +        L  L L ++ I+   A  + + L     + +L
Sbjct: 211 LRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVL 270

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
              + +    GA++IA+ + +  +LED   +   I  +GG+ L +A+++ + LK++++ +
Sbjct: 271 QFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRD 330

Query: 132 NQFGEEGVEEMEKLMKSFG-----MAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           N FG EG   + K +           + L LED+  E   E   + +      +  G++ 
Sbjct: 331 NMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDI 390

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGA-----RLVELDLSDNAFGPIG 241
            +    +  +  AS QS    N S N        L   A     +LVE+DLS N     G
Sbjct: 391 TVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQLVEVDLSTNMIRRAG 450

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
              LA  +     F L  L +N N +   G   ++    DC +
Sbjct: 451 ARALAQTVVKKNTFKL--LNINGNFISEEGIDEVNDMFKDCLD 491



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 3/176 (1%)

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           SS  EGS L  +      N L  +G +  A++      LE + +  +GI      A+ + 
Sbjct: 203 SSALEGSKL--RYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVREL 260

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
                 +R L  ++N    +GA  + + + + PSL         + S G  ++A+ L   
Sbjct: 261 LPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHC 320

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKS 459
           + L+ ++L  N   V+GG+ L K +   T L +I +S     +EG E + E L+KS
Sbjct: 321 SHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKS 376



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 38/179 (21%)

Query: 307 NEGAKMLAAVFKKLK-TLERVEM-------PQNGIYHVGITALSDAFEENKNLRHLNLND 358
           +E AK  A+V   +K  L  V++       P+     V +   S A E +K LR+LNL+D
Sbjct: 161 SEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEAEALEV-MNMFSSALEGSK-LRYLNLSD 218

Query: 359 NTITYKGAIPLGQALSK-------------------------LPS---LAILNLGDCLLK 390
           N +  KG       ++                          LPS   + +L   + +  
Sbjct: 219 NALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTG 278

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             GA++IA+ + +  +LED   +   I  +GG+ L +A+++ + LK++++ +N FG EG
Sbjct: 279 DEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEG 337



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 54/107 (50%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+ K   +LE +E+  N I       L+      + L  LNL++N +  +G I + +A+ 
Sbjct: 372 ALLKSAPSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVE 431

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
               L  ++L   +++ AGA ++A+ +    T + +N+  N IS +G
Sbjct: 432 GHDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFISEEG 478


>gi|261329190|emb|CBH12169.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 448

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 15/240 (6%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  LD+S N  GP G + +A L+    C  LE ++L  N LG  G       + +   + 
Sbjct: 179 LTSLDISLNEIGPGGAKPVAKLIEGPECV-LECVQLYGNRLGPEG-------VSEILAAV 230

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS-DAF 345
           KK  S   +K    G N   +  A  LAA+ ++  +LER+++  N +    +   + D  
Sbjct: 231 KKNRS---IKQLTLGNNHATDAVAADLAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGL 287

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQAL--SKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
            +N  LR L L  N +   G   + QAL  S++  L+ L+L  C L   G   IA  +  
Sbjct: 288 AQNSVLRSLCLAGNPLDSIGGEDISQALILSQVTVLSHLDLSSCQLGPIGGMRIANLIGT 347

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 462
           ++T+ DVNL+ N++  +    L  ++ N   +  +N+S N+ GE     + E   ++F M
Sbjct: 348 SSTITDVNLSDNKLDDEASASLANSILNGVSISSLNLSANEIGEWSASNLIEATQRNFRM 407



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALS-DAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LAA+ ++  +LE +++  N +    +   + D   +N  LR L L  N +   G   + Q
Sbjct: 254 LAAMLRENTSLERLDIRLNTLTAAAVRVFAQDGLAQNSVLRSLCLAGNPLDSIGGEDISQ 313

Query: 61  AL--SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
           AL  S++  L+ L+L  C L   G   IA  +  ++T+ DVNL+ N++  +    L  ++
Sbjct: 314 ALILSQVTVLSHLDLSSCQLGPIGGMRIANLIGTSSTITDVNLSDNKLDDEASASLANSI 373

Query: 119 KNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 151
            N   +  +N+S N+ GE     + E   ++F M
Sbjct: 374 LNGVSISSLNLSANEIGEWSASNLIEATQRNFRM 407



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 1/129 (0%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N +   G  ALS+    + NLR L+L  N +T +    L +A++   SL  L LG   L 
Sbjct: 103 NDVGREGCDALSNIVSISVNLRLLDLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLG 162

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEG 449
             GA+ +A+ L  NT L  ++++ NEI   G   + K ++  +  L+ + +  N+ G EG
Sbjct: 163 PEGAALLARKLEKNTYLTSLDISLNEIGPGGAKPVAKLIEGPECVLECVQLYGNRLGPEG 222

Query: 450 VEEMEKLMK 458
           V E+   +K
Sbjct: 223 VSEILAAVK 231



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N +   G  ALS+    +  LR L+L  N +T +    L +A++   SL  L LG   L 
Sbjct: 103 NDVGREGCDALSNIVSISVNLRLLDLRGNGLTPRCVHKLLKAVAVSTSLKRLGLGSNKLG 162

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEG 138
             GA+ +A+ L  NT L  ++++ NEI   G   + K ++  +  L+ + +  N+ G EG
Sbjct: 163 PEGAALLARKLEKNTYLTSLDISLNEIGPGGAKPVAKLIEGPECVLECVQLYGNRLGPEG 222

Query: 139 VEEMEKLMK 147
           V E+   +K
Sbjct: 223 VSEILAAVK 231


>gi|440639226|gb|ELR09145.1| hypothetical protein GMDG_03725 [Geomyces destructans 20631-21]
          Length = 377

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 10/227 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL---HDCYESS 286
           ++L+DNAFG      L   L S     L  L LNNNGLG     +++ AL   H    ++
Sbjct: 101 VNLNDNAFGLNMQAPLVAFLSSHT--PLRHLYLNNNGLGPHAGIMVADALSELHAKKAAA 158

Query: 287 KKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL-SDA 344
           +  G+ +  L+  I GRNRLE+      A  F     +  V+M QNGI   G   L SD 
Sbjct: 159 RAAGTDVPDLETVICGRNRLESGSMLAWAKAFSLHTGVREVKMVQNGIRTEGTVHLISDG 218

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
               K LR L+L DN  T  GA  L +A+     +  +   D L  + G   +A+ L   
Sbjct: 219 LRHAKGLRVLDLQDNLFTILGARALAKAVRGWEDIEEIGASDTLWGARGGVVLAQALAGG 278

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGEE 448
            N  L  + +  N+I+ +G   L + +K     +K++ ++ N+F E+
Sbjct: 279 KNKKLHTLRMQYNDINAKGLKVLTETIKLALPAMKRVELNGNKFSED 325



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 4/140 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            A  F     +  V+M QNGI   G   L SD     K LR L+L DN  T  GA  L +
Sbjct: 186 WAKAFSLHTGVREVKMVQNGIRTEGTVHLISDGLRHAKGLRVLDLQDNLFTILGARALAK 245

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           A+     +  +   D L  + G   +A+ L    N  L  + +  N+I+ +G   L + +
Sbjct: 246 AVRGWEDIEEIGASDTLWGARGGVVLAQALAGGKNKKLHTLRMQYNDINAKGLKVLTETI 305

Query: 119 K-NKTKLKQINVSENQFGEE 137
           K     +K++ ++ N+F E+
Sbjct: 306 KLALPAMKRVELNGNKFSED 325


>gi|378755227|gb|EHY65254.1| hypothetical protein NERG_01700 [Nematocida sp. 1 ERTm2]
          Length = 314

 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 124/230 (53%), Gaps = 19/230 (8%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           ++V  D+SDNA    G+E LA ++       L+ L +NNNG+GI G   L+KAL    E+
Sbjct: 94  KIVYFDISDNALSFNGMEILAPMIEK--MHVLKHLVMNNNGIGIDGGVFLAKAL----EN 147

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
             KE +  AL+    GRNRLE E A  L    +    L+ +++ QN I  + I  L  + 
Sbjct: 148 LSKEST--ALESLEVGRNRLE-ESATKLGKALELFPCLDSLKIYQNSINTINIGNLLTSL 204

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
               ++R L+++DN +   G+  L +++   P +  +N+ DC++   G +     L ++ 
Sbjct: 205 -GCLSMRILDISDNFLLEYGSKVLSESMKNWP-IEYMNIADCMMSDKGLAVFEDALVEHI 262

Query: 406 TLE-------DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           +++       +++++ N+I+ +  +D+++++  K+   ++ ++ N+ G++
Sbjct: 263 SVQGELISEKEIDMSYNDIT-EESVDILRSIVRKSNDTKLVLTGNEIGKQ 311



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 37/249 (14%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
           ++ A L  +DLS+N+F P  +E +  L+  S    +E +       GI   + + + ++ 
Sbjct: 28  ESAATLKGIDLSENSFSPEALEQV--LIELSKIEEIETVIFK----GIFTQR-VKEQVYP 80

Query: 282 CYESSKKEGSPLALKVFI-AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
             +S  K  +PL   V+     N L   G ++LA + +K+  L+ + M  NGI   G   
Sbjct: 81  SLQSIVKYITPLKKIVYFDISDNALSFNGMEILAPMIEKMHVLKHLVMNNNGIGIDGGVF 140

Query: 341 LSDAFE----ENKNLRHLNLNDNTITYKGAIPLGQALSKLP----------SLAILNLGD 386
           L+ A E    E+  L  L +  N +  + A  LG+AL   P          S+  +N+G+
Sbjct: 141 LAKALENLSKESTALESLEVGRNRLE-ESATKLGKALELFPCLDSLKIYQNSINTINIGN 199

Query: 387 CLLKSAGASSIAKY-LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
            LL S G  S+    ++DN  LE            G   L ++MKN   ++ +N+++   
Sbjct: 200 -LLTSLGCLSMRILDISDNFLLE-----------YGSKVLSESMKN-WPIEYMNIADCMM 246

Query: 446 GEEGVEEME 454
            ++G+   E
Sbjct: 247 SDKGLAVFE 255


>gi|18699563|gb|AAL78632.1|AF468522_1 NALP3 long isoform [Homo sapiens]
          Length = 1036

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 783  SHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLKKLWL 834

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S     C + +    +  +L     G N L + G  +L    K  +  L+++ +
Sbjct: 835  VSCCLTSAC---CQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGL 891

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  V  +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 892  VNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 950

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 951  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 1010

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1011 NYETKSALETL 1021



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 886  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 944

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 945  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 1004

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 1005 LSEMYFNYETKSALETL 1021


>gi|320168903|gb|EFW45802.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 792

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 165/364 (45%), Gaps = 57/364 (15%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + + KL  L+L+ N I   GA  + +AL    +LA L+LG   +   GA +IA+
Sbjct: 39  AIAEALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLASLSLGVNQIGDVGAQAIAE 98

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            LT N TL+++ L  N IS + G++++K + +KT                          
Sbjct: 99  VLTANKTLKELGLDQNFIS-ENGINVLKQIGDKT-------------------------- 131

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH--------NAS 200
           F ++A     DD+ + S  +  E +       A+   S L +   N           NAS
Sbjct: 132 FFLSA-----DDQSKPSSAQLQEMASRA----AQTRPSVLLYQIINQRQRELYDEVMNAS 182

Query: 201 NQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEE 259
              H    +  +   ++   +LK   +L  L+L++N  G +G + +A+ L  +    L E
Sbjct: 183 GTLHLFEYEIGDEEAKAIAEALKVNTKLSWLNLAENQIGDVGAQAIAEGL--TVNTTLTE 240

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L LN N +G  G + +++AL        K  + L L       N++ + GA+ +A   K 
Sbjct: 241 LFLNRNQIGDVGAQAIAEAL--------KVNTKLTL--LSLDYNQIGDAGAQAIAEALKV 290

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            KTL    +  N I   G  A+++A + NK L  L+L+ N I+  G   L Q  ++   L
Sbjct: 291 NKTLTEFYLDDNQIGDAGAQAIAEALKVNKKLTKLDLDQNFISDNGIKALRQVGNRTCQL 350

Query: 380 AILN 383
            ILN
Sbjct: 351 NILN 354



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 40/275 (14%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL---- 275
           +LK    L  L L  N  G +G + +A++L ++    L+EL L+ N +   G  +L    
Sbjct: 71  ALKVNKTLASLSLGVNQIGDVGAQAIAEVLTANKT--LKELGLDQNFISENGINVLKQIG 128

Query: 276 ---------------SKALHDCYESSKKEGSPLALKVFIAGRNR---------------- 304
                          S  L +    + +    + L   I  R R                
Sbjct: 129 DKTFFLSADDQSKPSSAQLQEMASRAAQTRPSVLLYQIINQRQRELYDEVMNASGTLHLF 188

Query: 305 ---LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
              + +E AK +A   K    L  + + +N I  VG  A+++    N  L  L LN N I
Sbjct: 189 EYEIGDEEAKAIAEALKVNTKLSWLNLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQI 248

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +AL     L +L+L    +  AGA +IA+ L  N TL +  L  N+I   G
Sbjct: 249 GDVGAQAIAEALKVNTKLTLLSLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDAG 308

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
              + +A+K   KL ++++ +N   + G++ + ++
Sbjct: 309 AQAIAEALKVNKKLTKLDLDQNFISDNGIKALRQV 343



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 22/268 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK   +L +L L  N  G  G + +A+ L+ +   A   L L  N +G  G + +++ L
Sbjct: 43  ALKVHTKLTDLSLDGNQIGDAGAQAIAEALKVNKTLA--SLSLGVNQIGDVGAQAIAEVL 100

Query: 280 HDCYESSKKEGSPLAL-KVFIA--GRNRLENEGAKML-----------AAVFKKLKTLER 325
                ++ K    L L + FI+  G N L+  G K             +A  +++ +   
Sbjct: 101 -----TANKTLKELGLDQNFISENGINVLKQIGDKTFFLSADDQSKPSSAQLQEMASRAA 155

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLR-HLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
              P   +Y +      + ++E  N    L+L +  I  + A  + +AL     L+ LNL
Sbjct: 156 QTRPSVLLYQIINQRQRELYDEVMNASGTLHLFEYEIGDEEAKAIAEALKVNTKLSWLNL 215

Query: 385 GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
            +  +   GA +IA+ LT NTTL ++ L  N+I   G   + +A+K  TKL  +++  NQ
Sbjct: 216 AENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIAEALKVNTKLTLLSLDYNQ 275

Query: 445 FGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            G+ G + + + +K         L+D++
Sbjct: 276 IGDAGAQAIAEALKVNKTLTEFYLDDNQ 303



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 68/134 (50%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + + +N I  VG  A+++    N  L  L LN N I   GA  + +AL     L +L
Sbjct: 210 LSWLNLAENQIGDVGAQAIAEGLTVNTTLTELFLNRNQIGDVGAQAIAEALKVNTKLTLL 269

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    +  AGA +IA+ L  N TL +  L  N+I   G   + +A+K   KL ++++ +
Sbjct: 270 SLDYNQIGDAGAQAIAEALKVNKTLTEFYLDDNQIGDAGAQAIAEALKVNKKLTKLDLDQ 329

Query: 132 NQFGEEGVEEMEKL 145
           N   + G++ + ++
Sbjct: 330 NFISDNGIKALRQV 343


>gi|320170755|gb|EFW47654.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 749

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 17/246 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG-----ITGCKL 274
           +L+    LV L+LS N  G  G   +A+ L++S    L EL ++ N +G       GC L
Sbjct: 68  ALRNKPALVALNLSQNKIGDAGAVPIAEGLQTSTV--LNELNMHTNQIGDEGATAIGCAL 125

Query: 275 LSKA------LHDCYESSKKEG---SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
             KA      + D    +  EG   SP   K+++   N++ + GA+ + +  +    L  
Sbjct: 126 RDKAHLSVLRIGDIGACAIAEGLRTSPGLTKLWMHA-NQVGDAGARAIGSALRDKANLSV 184

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + +  N I  +G  A+++  + +  L  L ++ N I   GA  +G AL     L++L L 
Sbjct: 185 LHLGNNKISDIGAGAIAEGLQASTALNELGMHTNRIGDAGAQAIGSALRNKAYLSVLGLN 244

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           +  +   GA +IA+ L  +T L +  +  N+I   G   +  A+ NK  L ++ +S+NQ 
Sbjct: 245 NNKIGDTGACAIAEGLQASTALAEFGMDTNQIGDAGAQAIGSALCNKAHLSKLILSDNQI 304

Query: 446 GEEGVE 451
               V+
Sbjct: 305 SSSAVQ 310



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 70/128 (54%)

Query: 315 AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
           A+F+K ++  RV +  +GI       +++  EEN NL+ LNL +N I   GA  +G AL 
Sbjct: 11  ALFEKARSSTRVILTYSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALR 70

Query: 375 KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 434
             P+L  LNL    +  AGA  IA+ L  +T L ++N+  N+I  +G   +  A+++K  
Sbjct: 71  NKPALVALNLSQNKIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRDKAH 130

Query: 435 LKQINVSE 442
           L  + + +
Sbjct: 131 LSVLRIGD 138



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 140/339 (41%), Gaps = 36/339 (10%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+F+K ++   V +  +GI       +++  EEN  L+ LNL +N I   GA  +G AL 
Sbjct: 11  ALFEKARSSTRVILTYSGITDDDALVIANGLEENNNLQWLNLQNNQIGDIGAQAIGSALR 70

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
             P+L  LNL    +  AGA  IA+ L  +T L ++N+  N+I  +G   +  A+++K  
Sbjct: 71  NKPALVALNLSQNKIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCALRDKAH 130

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           L  + + +   G   +   E L  S G+    +  +  G               D+ A  
Sbjct: 131 LSVLRIGD--IGACAIA--EGLRTSPGLTKLWMHANQVG---------------DAGARA 171

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
             S L         N S     N+  S   +      L+    L EL +  N  G  G +
Sbjct: 172 IGSAL-----RDKANLSVLHLGNNKISDIGAGAIAEGLQASTALNELGMHTNRIGDAGAQ 226

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
            +   LR+    ++  L LNNN +G TG   +++ L           +  AL  F    N
Sbjct: 227 AIGSALRNKAYLSV--LGLNNNKIGDTGACAIAEGLQ----------ASTALAEFGMDTN 274

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
           ++ + GA+ + +       L ++ +  N I    +  LS
Sbjct: 275 QIGDAGAQAIGSALCNKAHLSKLILSDNQISSSAVQLLS 313



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 23/179 (12%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GA+ + +  +    L  + + QN I   G   +++  + +  L  LN++ N I 
Sbjct: 55  NQIGDIGAQAIGSALRNKPALVALNLSQNKIGDAGAVPIAEGLQTSTVLNELNMHTNQIG 114

Query: 363 YKGAIPLGQALSKLPSLAILNLGD---CLLK--------------------SAGASSIAK 399
            +GA  +G AL     L++L +GD   C +                      AGA +I  
Sbjct: 115 DEGATAIGCALRDKAHLSVLRIGDIGACAIAEGLRTSPGLTKLWMHANQVGDAGARAIGS 174

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L D   L  ++L  N+IS  G   + + ++  T L ++ +  N+ G+ G + +   ++
Sbjct: 175 ALRDKANLSVLHLGNNKISDIGAGAIAEGLQASTALNELGMHTNRIGDAGAQAIGSALR 233



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 118/288 (40%), Gaps = 50/288 (17%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           + +  +    L  + + QN I   G   +++  + +  L  LN++ N I  +GA  +G A
Sbjct: 65  IGSALRNKPALVALNLSQNKIGDAGAVPIAEGLQTSTVLNELNMHTNQIGDEGATAIGCA 124

Query: 62  LSKLPSLAILNLGD---CLLK--------------------SAGASSIAKYLTDNTTLED 98
           L     L++L +GD   C +                      AGA +I   L D   L  
Sbjct: 125 LRDKAHLSVLRIGDIGACAIAEGLRTSPGLTKLWMHANQVGDAGARAIGSALRDKANLSV 184

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           ++L  N+IS  G   + + ++  T L ++ +  N+ G+ G + +   +++    + L L 
Sbjct: 185 LHLGNNKISDIGAGAIAEGLQASTALNELGMHTNRIGDAGAQAIGSALRNKAYLSVLGLN 244

Query: 159 D----DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTS 214
           +    D G C+  E  + S    +             D+N   +A  Q+  ++       
Sbjct: 245 NNKIGDTGACAIAEGLQASTALAEFGM----------DTNQIGDAGAQAIGSA-----LC 289

Query: 215 NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKL 262
           N++H+S        +L LSDN      V+ L+  L + C F+ +  ++
Sbjct: 290 NKAHLS--------KLILSDNQISSSAVQLLSQNLPAKCEFSADNQRI 329



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 5/136 (3%)

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           L+ + +  N I  +G  A+  A      L  LNL+ N I   GA+P+ + L     L  L
Sbjct: 47  LQWLNLQNNQIGDIGAQAIGSALRNKPALVALNLSQNKIGDAGAVPIAEGLQTSTVLNEL 106

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
           N+    +   GA++I   L D       +L+   I   G   + + ++    L ++ +  
Sbjct: 107 NMHTNQIGDEGATAIGCALRDK-----AHLSVLRIGDIGACAIAEGLRTSPGLTKLWMHA 161

Query: 443 NQFGEEGVEEMEKLMK 458
           NQ G+ G   +   ++
Sbjct: 162 NQVGDAGARAIGSALR 177


>gi|147790061|emb|CAN75983.1| hypothetical protein VITISV_012187 [Vitis vinifera]
          Length = 539

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 13/236 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L  LDLS+NA G  GV     LL+S    +LEEL L N+G+        ++A+ +  
Sbjct: 214 GCVLKSLDLSNNALGEKGVRAFGALLKSQS--SLEELYLMNDGISEEA----ARAVCELI 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      L+V     N   +EGA  ++ V K+   LE        I   G  ALS+
Sbjct: 268 PSTEK------LRVLQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGGVALSE 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A +   NL+ L+L DN    +  + L +AL+K   L    L    L+  GA +IA  L +
Sbjct: 322 ALQTFTNLKKLDLRDNMFGVEAGVALSKALAKHADLTEAYLSYLNLEDEGAVAIANVLKE 381

Query: 404 N-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + + LE + +  N+I+ +    L   +  K  + ++N++EN+  +EG  ++ K ++
Sbjct: 382 SASALEVLEMAGNDITAEAAPALAACIAAKQLITKLNLAENELRDEGAIQISKALE 437



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 18/233 (7%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNN------NGLGITGCKLLSKALHDCYES 285
            S+ +FG +G   +A+ + +S    L+E+ L++       G  +    + S+AL  C   
Sbjct: 160 FSNRSFG-LGAARVAEPILASLKDQLKEVDLSDFIAGRSEGEALEVMAIFSEALEGC--- 215

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                    LK      N L  +G +   A+ K   +LE + +  +GI      A+ +  
Sbjct: 216 --------VLKSLDLSNNALGEKGVRAFGALLKSQSSLEELYLMNDGISEEAARAVCELI 267

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
              + LR L  ++N    +GA+ + + + + P L         + S G  ++++ L   T
Sbjct: 268 PSTEKLRVLQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFT 327

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L+ ++L  N   V+ G+ L KA+     L +  +S     +EG   +  ++K
Sbjct: 328 NLKKLDLRDNMFGVEAGVALSKALAKHADLTEAYLSYLNLEDEGAVAIANVLK 380



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 1/130 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L+ +++  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +
Sbjct: 216 VLKSLDLSNNALGEKGVRAFGALLKSQSSLEELYLMNDGISEEAARAVCELIPSTEKLRV 275

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L   + +    GA +I++ +  +  LED   +   I   GG+ L +A++  T LK++++ 
Sbjct: 276 LQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLR 335

Query: 131 ENQFG-EEGV 139
           +N FG E GV
Sbjct: 336 DNMFGVEAGV 345



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ V K+   LE        I   G  ALS+A +    L+ L+L DN    +  + L +A
Sbjct: 291 ISEVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLRDNMFGVEAGVALSKA 350

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L+K   L    L    L+  GA +IA  L ++ + LE + +  N+I+ +    L   +  
Sbjct: 351 LAKHADLTEAYLSYLNLEDEGAVAIANVLKESASALEVLEMAGNDITAEAAPALAACIAA 410

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  + ++N++EN+  +EG  ++ K ++
Sbjct: 411 KQLITKLNLAENELRDEGAIQISKALE 437



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 66/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             A+ K   +LE + +  +GI      A+ +     +KLR L  ++N    +GA+ + + 
Sbjct: 235 FGALLKSQSSLEELYLMNDGISEEAARAVCELIPSTEKLRVLQFHNNMTGDEGALAISEV 294

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P L         + S G  ++++ L   T L+ ++L  N   V+ G+ L KA+   
Sbjct: 295 VKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLRDNMFGVEAGVALSKALAKH 354

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L +  +S     +EG   +  ++K
Sbjct: 355 ADLTEAYLSYLNLEDEGAVAIANVLK 380



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 71  LNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           LNL +  L+  GA  I+K L D +  L++V+L+ N +   G   L +A+ +K  LK +N+
Sbjct: 417 LNLAENELRDEGAIQISKALEDGHAQLKEVDLSSNFMRRAGARCLARAVVHKPGLKLLNI 476

Query: 130 SENQFGEEGVEEMEKLMKSF-GMAAALVLEDDEGE 163
           + N   +EG++E++ +   F  +  +L   D EGE
Sbjct: 477 NGNFISDEGIDEVKSIFNEFPNVLGSLDENDPEGE 511


>gi|189054644|dbj|BAG37494.1| unnamed protein product [Homo sapiens]
          Length = 1034

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 781  SHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLKKLWL 832

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S     C + +    +  +L     G N L + G  +L    K  +  L+++ +
Sbjct: 833  VSCCLTSAC---CQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGL 889

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  V  +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 890  VNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 948

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 949  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 1008

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1009 NYETKSALETL 1019



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 884  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 942

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 943  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 1002

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 1003 LSEMYFNYETKSALETL 1019


>gi|341865590|ref|NP_001230062.1| NACHT, LRR and PYD domains-containing protein 3 isoform e [Homo
            sapiens]
 gi|17026372|gb|AAL33908.1|AF410477_1 cryopyrin [Homo sapiens]
 gi|18182339|gb|AAL65136.1|AF420469_1 PYRIN-containing APAF1-like protein 1 [Homo sapiens]
 gi|17027237|gb|AAL12497.1| cryopyrin [Homo sapiens]
          Length = 1034

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 781  SHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLKKLWL 832

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S     C + +    +  +L     G N L + G  +L    K  +  L+++ +
Sbjct: 833  VSCCLTSAC---CQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGL 889

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  V  +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 890  VNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 948

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 949  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 1008

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1009 NYETKSALETL 1019



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 884  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 942

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 943  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 1002

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 1003 LSEMYFNYETKSALETL 1019


>gi|326428860|gb|EGD74430.1| hypothetical protein PTSG_12362 [Salpingoeca sp. ATCC 50818]
          Length = 647

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 14/180 (7%)

Query: 262 LNNNGLGITGCKLLSKALHD--CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L+++GLG  G + +++AL D  C            LK      N +  EGA  LA + K 
Sbjct: 10  LDDDGLGDIGARAVAEALKDNTC------------LKTLFLWANSIGPEGAVALAEMLKH 57

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             TLE + +  N I   G  AL++  + N  L  L L++N+I  +GA  L + L    +L
Sbjct: 58  NTTLEILNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTL 117

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L L +  +   GA ++A+ L  NTTL  + L  N IS +G + L + +K+ T L+++ 
Sbjct: 118 TVLGLSNNSIGDKGAVALAEMLKHNTTLTWLGLQINPISDEGAVALAEMLKHNTALEELR 177



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 78/137 (56%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+ +  +  +G+  +G  A+++A ++N  L+ L L  N+I  +GA+ L + L    +L I
Sbjct: 4   TIWNYSLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEI 63

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL +  +   GA ++A+ L  NT LE++ L+ N I  +G   L + +K+ T L  + +S
Sbjct: 64  LNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLS 123

Query: 131 ENQFGEEGVEEMEKLMK 147
            N  G++G   + +++K
Sbjct: 124 NNSIGDKGAVALAEMLK 140



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 77/137 (56%)

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           T+    +  +G+  +G  A+++A ++N  L+ L L  N+I  +GA+ L + L    +L I
Sbjct: 4   TIWNYSLDDDGLGDIGARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEI 63

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           LNL +  +   GA ++A+ L  NT LE++ L+ N I  +G   L + +K+ T L  + +S
Sbjct: 64  LNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLS 123

Query: 442 ENQFGEEGVEEMEKLMK 458
            N  G++G   + +++K
Sbjct: 124 NNSIGDKGAVALAEMLK 140



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA+ +A   K    L+ + +  N I   G  AL++  + N  L  LNL++N I  +GA+ 
Sbjct: 19  GARAVAEALKDNTCLKTLFLWANSIGPEGAVALAEMLKHNTTLEILNLDNNPIGDEGAVA 78

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           L + L    +L  L L +  +   GA+++A+ L  NTTL  + L+ N I  +G + L + 
Sbjct: 79  LAEMLKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTVLGLSNNSIGDKGAVALAEM 138

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +K+ T L  + +  N   +EG   + +++K
Sbjct: 139 LKHNTTLTWLGLQINPISDEGAVALAEMLK 168



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K   TLE + +  N I   G  AL++  + N  L  L L++N+I  +GA  L + 
Sbjct: 51  LAEMLKHNTTLEILNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIGPEGAAALAEM 110

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L +L L +  +   GA ++A+ L  NTTL  + L  N IS +G + L + +K+ 
Sbjct: 111 LKHNTTLTVLGLSNNSIGDKGAVALAEMLKHNTTLTWLGLQINPISDEGAVALAEMLKHN 170

Query: 122 TKLKQIN 128
           T L+++ 
Sbjct: 171 TALEELR 177



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 68/128 (53%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  AL++  + N  L  LNL++N I  +GA+ L + L    +L  L L +  + 
Sbjct: 41  NSIGPEGAVALAEMLKHNTTLEILNLDNNPIGDEGAVALAEMLKHNTALEELRLSENSIG 100

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
             GA+++A+ L  NTTL  + L+ N I  +G + L + +K+ T L  + +  N   +EG 
Sbjct: 101 PEGAAALAEMLKHNTTLTVLGLSNNSIGDKGAVALAEMLKHNTTLTWLGLQINPISDEGA 160

Query: 140 EEMEKLMK 147
             + +++K
Sbjct: 161 VALAEMLK 168



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 14/116 (12%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL- 279
           LK    L EL LS+N+ GP G   LA++L+ +    +  L L+NN +G  G   L++ L 
Sbjct: 83  LKHNTALEELRLSENSIGPEGAAALAEMLKHNTTLTV--LGLSNNSIGDKGAVALAEMLK 140

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           H+   +       L L++     N + +EGA  LA + K    LE +   +  ++H
Sbjct: 141 HNTTLTW------LGLQI-----NPISDEGAVALAEMLKHNTALEELRERRPTMWH 185


>gi|326428417|gb|EGD73987.1| hypothetical protein PTSG_05682 [Salpingoeca sp. ATCC 50818]
          Length = 1296

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 13/214 (6%)

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G   +A  LR + C  L  L L +N +G  G K L+  L     +S K  + L L+    
Sbjct: 52  GATVIAHALRQNTCVKL--LGLGHNCIGPDGAKALANML-----ASNKTITILRLQ---- 100

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
             NR+ NEGA  LA V  + K++  + +  N I   G  AL++    N  + H++L  N+
Sbjct: 101 -SNRIGNEGAIALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANS 159

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISV 419
           I +KGA  L + L    +L  L LG+  +  AG  ++AK L TDN+TL+ + L CN +S 
Sbjct: 160 IGHKGAQALAEMLKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSD 219

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
              + L   ++    +  + +  N     G  E+
Sbjct: 220 SSAVALANMLRRNKAVTTLGLDINTITPGGGAEL 253



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L+++GA ++A   ++   ++ + +  N I   G  AL++    NK +  L L  N I  +
Sbjct: 48  LDSQGATVIAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQSNRIGNE 107

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           GAI L   L +  S+  L L    +  AGA ++A  L  N T+  V+L  N I  +G   
Sbjct: 108 GAIALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANSIGHKGAQA 167

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L + +K+ T L  + + EN  G+ GVE + K +++
Sbjct: 168 LAEMLKDSTTLTHLKLGENAIGDAGVEALAKALET 202



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  AL++    NK +  L L  N I  +GAI L   L +  S+  L L    +  AGA +
Sbjct: 80  GAKALANMLASNKTITILRLQSNRIGNEGAIALADVLCRNKSVTELRLHHNNIGLAGAEA 139

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +A  L  N T+  V+L  N I  +G   L + +K+ T L  + + EN  G+ GVE + K 
Sbjct: 140 LANMLRTNATITHVSLFANSIGHKGAQALAEMLKDSTTLTHLKLGENAIGDAGVEALAKA 199

Query: 146 MKS 148
           +++
Sbjct: 200 LET 202



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 1/142 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V  + K++  + +  N I   G  AL++    N  + H++L  N+I +KGA  L + 
Sbjct: 112 LADVLCRNKSVTELRLHHNNIGLAGAEALANMLRTNATITHVSLFANSIGHKGAQALAEM 171

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    +L  L LG+  +  AG  ++AK L TDN+TL+ + L CN +S    + L   ++ 
Sbjct: 172 LKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSDSSAVALANMLRR 231

Query: 121 KTKLKQINVSENQFGEEGVEEM 142
              +  + +  N     G  E+
Sbjct: 232 NKAVTTLGLDINTITPGGGAEL 253



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 13/159 (8%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           + EL L  N  G  G E LA++LR++    +  + L  N +G  G + L++ L D    +
Sbjct: 122 VTELRLHHNNIGLAGAEALANMLRTNAT--ITHVSLFANSIGHKGAQALAEMLKDSTTLT 179

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                   LK+   G N + + G + LA A+     TL+ + +  NG+      AL++  
Sbjct: 180 H-------LKL---GENAIGDAGVEALAKALETDNSTLQVLWLNCNGLSDSSAVALANML 229

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
             NK +  L L+ NTIT  G   LG +L +  SL +L L
Sbjct: 230 RRNKAVTTLGLDINTITPGGGAELGASLHENHSLRVLTL 268



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 115/303 (37%), Gaps = 62/303 (20%)

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           + LG   L S GA+ IA  L  NT ++ + L  N I   G   L   + +   +  + + 
Sbjct: 41  VTLGFVSLDSQGATVIAHALRQNTCVKLLGLGHNCIGPDGAKALANMLASNKTITILRLQ 100

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N+ G EG            +A A VL      C ++   E     N+    G  +    
Sbjct: 101 SNRIGNEG-----------AIALADVL------CRNKSVTELRLHHNNIGLAGAEA---- 139

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
                    +N    N+  +H                  + L  N+ G  G + LA++L+
Sbjct: 140 --------LANMLRTNATITH------------------VSLFANSIGHKGAQALAEMLK 173

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            S    L  LKL  N +G  G + L+KAL         E     L+V     N L +  A
Sbjct: 174 DSTT--LTHLKLGENAIGDAGVEALAKAL---------ETDNSTLQVLWLNCNGLSDSSA 222

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI----TYKGA 366
             LA + ++ K +  + +  N I   G   L  +  EN +LR L L+ N+      +  A
Sbjct: 223 VALANMLRRNKAVTTLGLDINTITPGGGAELGASLHENHSLRVLTLSHNSTATARAFGAA 282

Query: 367 IPL 369
           +P+
Sbjct: 283 VPV 285



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KT+  + +  N I + G  AL+D    NK +  L L+ N I   GA  L   L    ++ 
Sbjct: 92  KTITILRLQSNRIGNEGAIALADVLCRNKSVTELRLHHNNIGLAGAEALANMLRTNATIT 151

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
            ++L    +   GA ++A+ L D+TTL  + L  N I   G   L KA++      Q+
Sbjct: 152 HVSLFANSIGHKGAQALAEMLKDSTTLTHLKLGENAIGDAGVEALAKALETDNSTLQV 209


>gi|34878693|ref|NP_004886.3| NACHT, LRR and PYD domains-containing protein 3 isoform a [Homo
            sapiens]
 gi|119395764|ref|NP_001073289.1| NACHT, LRR and PYD domains-containing protein 3 isoform a [Homo
            sapiens]
 gi|262527566|sp|Q96P20.3|NALP3_HUMAN RecName: Full=NACHT, LRR and PYD domains-containing protein 3;
            AltName: Full=Angiotensin/vasopressin receptor
            AII/AVP-like; AltName: Full=Caterpiller protein 1.1;
            Short=CLR1.1; AltName: Full=Cold autoinflammatory
            syndrome 1 protein; AltName: Full=Cryopyrin; AltName:
            Full=PYRIN-containing APAF1-like protein 1
 gi|119597590|gb|EAW77184.1| cold autoinflammatory syndrome 1, isoform CRA_b [Homo sapiens]
 gi|119597592|gb|EAW77186.1| cold autoinflammatory syndrome 1, isoform CRA_b [Homo sapiens]
 gi|219518791|gb|AAI43363.1| NLR family, pyrin domain containing 3 [Homo sapiens]
          Length = 1036

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 783  SHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLKKLWL 834

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S     C + +    +  +L     G N L + G  +L    K  +  L+++ +
Sbjct: 835  VSCCLTSAC---CQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGL 891

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  V  +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 892  VNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 950

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 951  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 1010

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1011 NYETKSALETL 1021



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 886  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 944

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 945  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 1004

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 1005 LSEMYFNYETKSALETL 1021


>gi|225432584|ref|XP_002281311.1| PREDICTED: RAN GTPase-activating protein 2 [Vitis vinifera]
          Length = 539

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 13/236 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L  LDLS+NA G  GV     LL+S    +LEEL L N+G+        ++A+ +  
Sbjct: 214 GCVLKSLDLSNNALGEKGVRAFGALLKSQS--SLEELYLMNDGISEEA----ARAVCELI 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      L+V     N   +EGA  ++ V K+   LE        I   G  ALS+
Sbjct: 268 PSTEK------LRVLQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGGVALSE 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A +   NL+ L+L DN    +  + L +AL+K   L    L    L+  GA +IA  L +
Sbjct: 322 ALQTFTNLKKLDLRDNMFGVEAGVALSKALAKHADLTEAYLSYLNLEDEGAVAIANVLKE 381

Query: 404 N-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + + LE + +  N+I+ +    L   +  K  + ++N++EN+  +EG  ++ K ++
Sbjct: 382 SASALEVMEMAGNDITAEAAPALAACIAAKQLITKLNLAENELRDEGAIQISKALE 437



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 18/233 (7%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNN------NGLGITGCKLLSKALHDCYES 285
            S+ +FG +G   +A+ + +S    L+E+ L++       G  +    + S+AL  C   
Sbjct: 160 FSNRSFG-LGAARVAEPILASLKDQLKEVDLSDFIAGRSEGEALEVMAIFSEALEGC--- 215

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                    LK      N L  +G +   A+ K   +LE + +  +GI      A+ +  
Sbjct: 216 --------VLKSLDLSNNALGEKGVRAFGALLKSQSSLEELYLMNDGISEEAARAVCELI 267

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
              + LR L  ++N    +GA+ + + + + P L         + S G  ++++ L   T
Sbjct: 268 PSTEKLRVLQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFT 327

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L+ ++L  N   V+ G+ L KA+     L +  +S     +EG   +  ++K
Sbjct: 328 NLKKLDLRDNMFGVEAGVALSKALAKHADLTEAYLSYLNLEDEGAVAIANVLK 380



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 1/130 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L+ +++  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +
Sbjct: 216 VLKSLDLSNNALGEKGVRAFGALLKSQSSLEELYLMNDGISEEAARAVCELIPSTEKLRV 275

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L   + +    GA +I++ +  +  LED   +   I   GG+ L +A++  T LK++++ 
Sbjct: 276 LQFHNNMTGDEGALAISEVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLR 335

Query: 131 ENQFG-EEGV 139
           +N FG E GV
Sbjct: 336 DNMFGVEAGV 345



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ V K+   LE        I   G  ALS+A +    L+ L+L DN    +  + L +A
Sbjct: 291 ISEVVKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLRDNMFGVEAGVALSKA 350

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L+K   L    L    L+  GA +IA  L ++ + LE + +  N+I+ +    L   +  
Sbjct: 351 LAKHADLTEAYLSYLNLEDEGAVAIANVLKESASALEVMEMAGNDITAEAAPALAACIAA 410

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  + ++N++EN+  +EG  ++ K ++
Sbjct: 411 KQLITKLNLAENELRDEGAIQISKALE 437



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 66/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             A+ K   +LE + +  +GI      A+ +     +KLR L  ++N    +GA+ + + 
Sbjct: 235 FGALLKSQSSLEELYLMNDGISEEAARAVCELIPSTEKLRVLQFHNNMTGDEGALAISEV 294

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P L         + S G  ++++ L   T L+ ++L  N   V+ G+ L KA+   
Sbjct: 295 VKQSPMLEDFRCSSTRIGSDGGVALSEALQTFTNLKKLDLRDNMFGVEAGVALSKALAKH 354

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L +  +S     +EG   +  ++K
Sbjct: 355 ADLTEAYLSYLNLEDEGAVAIANVLK 380



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 71  LNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           LNL +  L+  GA  I+K L D +  L++V+L+ N +   G   L +A+ +K  LK +N+
Sbjct: 417 LNLAENELRDEGAIQISKALEDGHAQLKEVDLSSNFMRRAGARCLARAVVHKPGLKLLNI 476

Query: 130 SENQFGEEGVEEMEKLMKSF-GMAAALVLEDDEGE 163
           + N   +EG++E++ +   F  +  +L   D EGE
Sbjct: 477 NGNFISDEGIDEVKSIFNEFPNVLGSLDENDPEGE 511


>gi|156354309|ref|XP_001623340.1| predicted protein [Nematostella vectensis]
 gi|156210028|gb|EDO31240.1| predicted protein [Nematostella vectensis]
          Length = 389

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 169/387 (43%), Gaps = 45/387 (11%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           A  +A+ L+DNT+L DV +    +   G   L  A+K    ++ + +       E    +
Sbjct: 11  AIKLAEILSDNTSLTDVRIKSEILGGTGIKRLANALKVNKTVRTLGIDGGNMTSEAGRAI 70

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
            ++++      +L L                    D  A G    L+ N +    + +N 
Sbjct: 71  GEMLRHNTTVTSLFLSGGR--------------LGDFGARGIAIGLAQNTTIAQLSIANS 116

Query: 203 SHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKL 262
           S   +     T      SLK    L E+ +  + FG      LA++L  +   +L ++++
Sbjct: 117 SICTAGIKAITK-----SLKNNVTLSEICIESDGFGDSCAIKLAEILSDN--TSLTDVRI 169

Query: 263 NNNGLGITGCKLLSKAL--------------HDCYESSKKEGSPL-----ALKVFIAGRN 303
           ++N LG TG K L+ AL              +   E+ +  G  L        +F++G  
Sbjct: 170 DSNILGGTGIKRLANALKVNKTVRTLGIAGGNMTSEAGRAIGEMLRHNTTVTSLFLSG-G 228

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           RL + GA+ +A    + +T+ ++ +  + I   GI A++   +   N+ HL+L+ N + Y
Sbjct: 229 RLGDSGARGIAIGLAQKRTIAQLSIANSSIGTAGIKAITKVIQ---NVTHLDLSGNPVGY 285

Query: 364 KGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            G   + + L K    L  L L  C +   GA  +A  L+ N+ LE++++ CN+I+ +G 
Sbjct: 286 DGVKAIARLLVKSCCRLKFLFLDRCNIDVFGAKELAIALSRNSCLEELSVACNDINDEGM 345

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEG 449
             L +++ +   L+ + +S N  G+ G
Sbjct: 346 CALAESVASNETLQVLYISYNNVGQNG 372



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 157/401 (39%), Gaps = 73/401 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA +     +L  V +    +   GI  L++A + NK +R L ++   +T +    +G+ 
Sbjct: 14  LAEILSDNTSLTDVRIKSEILGGTGIKRLANALKVNKTVRTLGIDGGNMTSEAGRAIGEM 73

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L L    L   GA  IA  L  NTT+  +++  + I   G   + K++KN 
Sbjct: 74  LRHNTTVTSLFLSGGRLGDFGARGIAIGLAQNTTIAQLSIANSSICTAGIKAITKSLKNN 133

Query: 122 TKLKQINVSENQFGEE----------------------------GVEEME------KLMK 147
             L +I +  + FG+                             G++ +       K ++
Sbjct: 134 VTLSEICIESDGFGDSCAIKLAEILSDNTSLTDVRIDSNILGGTGIKRLANALKVNKTVR 193

Query: 148 SFGMAAALVLEDDEGECSDEEQDEESEEEN---------DSDAEGDNSNLSHNDSNHSHN 198
           + G+A    +  + G    E     +   +         DS A G    L+   +    +
Sbjct: 194 TLGIAGG-NMTSEAGRAIGEMLRHNTTVTSLFLSGGRLGDSGARGIAIGLAQKRTIAQLS 252

Query: 199 ASNQSHNNSNQSHNT---SNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
            +N S   +     T    N +H+           DLS N  G  GV+ +A LL  SCC 
Sbjct: 253 IANSSIGTAGIKAITKVIQNVTHL-----------DLSGNPVGYDGVKAIARLLVKSCC- 300

Query: 256 ALEELKLNNNGLGITGCKLLSKAL--HDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
            L+ L L+   + + G K L+ AL  + C E        L++       N + +EG   L
Sbjct: 301 RLKFLFLDRCNIDVFGAKELAIALSRNSCLE-------ELSVAC-----NDINDEGMCAL 348

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           A      +TL+ + +  N +   G   +  A E +K++RHL
Sbjct: 349 AESVASNETLQVLYISYNNVGQNGKKVIISACETSKSVRHL 389



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 68/145 (46%)

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           LA +     +L  V +    +   GI  L++A + NK +R L ++   +T +    +G+ 
Sbjct: 14  LAEILSDNTSLTDVRIKSEILGGTGIKRLANALKVNKTVRTLGIDGGNMTSEAGRAIGEM 73

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L    ++  L L    L   GA  IA  L  NTT+  +++  + I   G   + K++KN 
Sbjct: 74  LRHNTTVTSLFLSGGRLGDFGARGIAIGLAQNTTIAQLSIANSSICTAGIKAITKSLKNN 133

Query: 433 TKLKQINVSENQFGEEGVEEMEKLM 457
             L +I +  + FG+    ++ +++
Sbjct: 134 VTLSEICIESDGFGDSCAIKLAEIL 158



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 6/167 (3%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L   G K LA   K  KT+  + +    +      A+ +    N  +  L L+   +   
Sbjct: 34  LGGTGIKRLANALKVNKTVRTLGIDGGNMTSEAGRAIGEMLRHNTTVTSLFLSGGRLGDF 93

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           GA  +   L++  ++A L++ +  + +AG  +I K L +N TL ++ +  +       + 
Sbjct: 94  GARGIAIGLAQNTTIAQLSIANSSICTAGIKAITKSLKNNVTLSEICIESDGFGDSCAIK 153

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEME------KLMKSFGMAAA 465
           L + + + T L  + +  N  G  G++ +       K +++ G+A  
Sbjct: 154 LAEILSDNTSLTDVRIDSNILGGTGIKRLANALKVNKTVRTLGIAGG 200


>gi|402858415|ref|XP_003893702.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform 1
            [Papio anubis]
          Length = 1035

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 782  SHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLKKLWL 833

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S     C + +    +  +L     G N L + G  +L    K  +  L+++ +
Sbjct: 834  VSCCLTSAC---CPDLASVLSTNCSLTRLYVGENALGDAGVAILCEKAKNPQCNLQKLGL 890

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  V  +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 891  VNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 949

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 950  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 1009

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1010 NYETKSALETL 1020



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 885  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 943

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 944  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 1003

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 1004 LSEMYFNYETKSALETL 1020


>gi|114573612|ref|XP_001141114.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
           2 [Pan troglodytes]
          Length = 979

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 115/265 (43%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +        SH       + L +  +LVELDLSDNA    G+  L        C 
Sbjct: 712 SHAACSHGLGRCGLSHECCFDISLVLSSNQKLVELDLSDNALSDFGIRLL--------CV 763

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            L+ L  N   L +  C L S     C + +    +  +L     G N L + G  +L  
Sbjct: 764 GLKHLLCNLKKLWLVSCCLTSAC---CQDLASVLSTSHSLTRLYVGENTLGDSGVAILCE 820

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K  +  L+++ +  +G+  V  +ALS     N NL HL L  NT+  KG   L + L 
Sbjct: 821 KAKNPQCNLQKLGLVNSGLTSVCCSALSSVLSTNPNLTHLYLRGNTLGDKGIKLLCEGLL 880

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 881 H-PDCKLQVLELDNCNLTSHCCGDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 939

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 940 SCLLQNLGLSEMYFNYETKSALETL 964



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
           L+ + +  +G+  V  +ALS     N  L HL L  NT+  KG   L + L   P   L 
Sbjct: 829 LQKLGLVNSGLTSVCCSALSSVLSTNPNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 887

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
           +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 888 VLELDNCNLTSHCCGDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 947

Query: 129 VSENQFGEEGVEEMEKL 145
           +SE  F  E    +E L
Sbjct: 948 LSEMYFNYETKSALETL 964


>gi|397488693|ref|XP_003815385.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform 1
            [Pan paniscus]
          Length = 1036

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 16/251 (6%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 783  SHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLKKLWL 834

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S     C + +    +  +L     G N L + G  +L    K  +  L+++ +
Sbjct: 835  VSCCLTSAC---CQDLASVLSTSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGL 891

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  V  +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 892  VNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 950

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 951  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 1010

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1011 NYETKSALETL 1021



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 886  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 944

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 945  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 1004

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 1005 LSEMYFNYETKSALETL 1021


>gi|224085459|ref|XP_002307582.1| predicted protein [Populus trichocarpa]
 gi|222857031|gb|EEE94578.1| predicted protein [Populus trichocarpa]
          Length = 522

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G +L  L+LS+NA G  GV     LL++     LEEL L N+G+        ++A+ +  
Sbjct: 213 GCKLRYLNLSNNALGEKGVRAFGMLLKTQNI--LEELYLINDGISEEA----ARAVCELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G  AL++
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAAAIAEMLKQSNLLEDFRCSSTRVGLEGGVALAE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A     +LR L+L DN    +  I L ++L     L  + L    L+  GA ++A  L +
Sbjct: 321 ALGSCSHLRKLDLRDNMFGVEAGIALSKSLFAFADLTEVYLSYLNLEDEGAEALANALKE 380

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +  +LE +++  N+I+ +G   LV  +  K  L ++N++EN+  +EG
Sbjct: 381 SAPSLEVLDMAGNDITAKGASSLVACIVAKQFLTKLNLAENELKDEG 427



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL++A +E+   L  L++  N IT KGA  L   +     L  LNL +  LK  GA 
Sbjct: 370 GAEALANALKESAPSLEVLDMAGNDITAKGASSLVACIVAKQFLTKLNLAENELKDEGAI 429

Query: 85  SIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            IAK +   +  L +V+L+ N I   G   L +A+ +K   K +N++ N   +EG++E++
Sbjct: 430 LIAKAIEAGHDQLNEVDLSTNAIRRAGARLLAQAVVHKPGFKSLNINGNYISDEGIDEVK 489

Query: 144 KLMKSF 149
            + KS 
Sbjct: 490 DIFKSL 495



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 69/139 (49%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L ++ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LRYLNLSNNALGEKGVRAFGMLLKTQNILEELYLINDGISEEAARAVCELIPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA++IA+ L  +  LED   +   + ++GG+ L +A+ + + L+++++ +
Sbjct: 276 HFHNNMTGDEGAAAIAEMLKQSNLLEDFRCSSTRVGLEGGVALAEALGSCSHLRKLDLRD 335

Query: 132 NQFGEEGVEEMEKLMKSFG 150
           N FG E    + K + +F 
Sbjct: 336 NMFGVEAGIALSKSLFAFA 354



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 80/165 (48%), Gaps = 4/165 (2%)

Query: 299 IAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           +AGR   E+E  +++      L+   L  + +  N +   G+ A     +    L  L L
Sbjct: 192 VAGRP--ESEALEVMGIFSSALEGCKLRYLNLSNNALGEKGVRAFGMLLKTQNILEELYL 249

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
            ++ I+ + A  + + +     L +L+  + +    GA++IA+ L  +  LED   +   
Sbjct: 250 INDGISEEAARAVCELIPSTEKLKVLHFHNNMTGDEGAAAIAEMLKQSNLLEDFRCSSTR 309

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           + ++GG+ L +A+ + + L+++++ +N FG E    + K + +F 
Sbjct: 310 VGLEGGVALAEALGSCSHLRKLDLRDNMFGVEAGIALSKSLFAFA 354


>gi|18391166|ref|NP_563871.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein [Arabidopsis thaliana]
 gi|15810395|gb|AAL07085.1| unknown protein [Arabidopsis thaliana]
 gi|20258921|gb|AAM14154.1| unknown protein [Arabidopsis thaliana]
 gi|332190466|gb|AEE28587.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein [Arabidopsis thaliana]
          Length = 605

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 173/451 (38%), Gaps = 68/451 (15%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +T+E V    NGI   G+ A     + N  L+ LNL+ N I  +GA  L   L +  S+ 
Sbjct: 198 QTVEEVSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIE 257

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           IL L    +   GA  IA+ L  N+TL  + L  N I   G   L  A+     ++ +++
Sbjct: 258 ILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHL 317

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N  G  G   + K +              EG  S  E         D       + LS
Sbjct: 318 NGNYGGALGANALAKGL--------------EGNKSLRELHLHGNSIGDEGTRALMAGLS 363

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGVEGLAD 247
                 SH       +  N S +     +++  +K    LV L+L  N  G  G E +AD
Sbjct: 364 ------SHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIAD 417

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
            L+ +   A  +L                                        G N +  
Sbjct: 418 SLKQNRSIATIDL----------------------------------------GGNNIHA 437

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           EG   +A   K    +  +E+  N I   G  ALS+  + + N++ L L    I  KGA 
Sbjct: 438 EGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAE 497

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLV 426
            +   L    ++++L+L    L+  GAS +A+ L   N  L  V+L  NEI   G   + 
Sbjct: 498 HVADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIA 557

Query: 427 KAMK--NKTKLKQINVSEN---QFGEEGVEE 452
           +A+K      +  IN+  N   +FG+  + +
Sbjct: 558 QALKANEDVTVTSINLGNNFITKFGQSALTD 588



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/384 (22%), Positives = 165/384 (42%), Gaps = 33/384 (8%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           + +AG  +    L  N  L+ +NL+ N I  +G   L   +   + ++ + ++    G+E
Sbjct: 210 ITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDE 269

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G +E+ +L+K       + L ++  + S       +  EN                    
Sbjct: 270 GAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLEN-------------------- 309

Query: 198 NASNQSHNNSNQSHNT-SNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
           N     H N N      +N     L+    L EL L  N+ G  G   L   L SS    
Sbjct: 310 NTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGL-SSHKGK 368

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +  L L NN +   G   ++       E  K+  S + L +++   N + +EGA+ +A  
Sbjct: 369 VALLDLGNNSISAKGAFYVA-------EYIKRSKSLVWLNLYM---NDIGDEGAEKIADS 418

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            K+ +++  +++  N I+  G+ A++ A ++N  +  L +  N I   GA  L + L   
Sbjct: 419 LKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFH 478

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-L 435
            ++  L LG C + + GA  +A  L  N T+  ++L  N +  +G   L +++K   + L
Sbjct: 479 GNVKTLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEAL 538

Query: 436 KQINVSENQFGEEGVEEMEKLMKS 459
             +++  N+  ++G   + + +K+
Sbjct: 539 TSVDLGFNEIRDDGAFAIAQALKA 562



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 174/401 (43%), Gaps = 42/401 (10%)

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           +L S   +++  C     G   +A+ L  N T+E+V+ + N I+  G       +++   
Sbjct: 168 ELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIM 227

Query: 124 LKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
           LK +N+S N  G+EG + +   LM++   ++  +L+ +  +  DE   E +E        
Sbjct: 228 LKILNLSGNPIGDEGAKTLCATLMEN---SSIEILQLNSTDIGDEGAKEIAELLKR---- 280

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARL-----VELDLSDNAF 237
             NS L   + N+                N  + S  +   GA L       L L+ N  
Sbjct: 281 --NSTLRIIELNN----------------NMIDYSGFTSLAGALLENNTIRNLHLNGNYG 322

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
           G +G   LA  L  +   +L EL L+ N +G  G + L   L      S  +G    L +
Sbjct: 323 GALGANALAKGLEGNK--SLRELHLHGNSIGDEGTRALMAGL------SSHKGKVALLDL 374

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
              G N +  +GA  +A   K+ K+L  + +  N I   G   ++D+ ++N+++  ++L 
Sbjct: 375 ---GNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLG 431

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N I  +G   + QAL     +  L +G   +   GA ++++ L  +  ++ + L   +I
Sbjct: 432 GNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQI 491

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + +G   +   ++    +  +++  N   +EG   + + +K
Sbjct: 492 AAKGAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLK 532



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 69/297 (23%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           E+  S N     GV+    +L+S+    L+ L L+ N +G  G K L   L    E+S  
Sbjct: 202 EVSFSANGITAAGVKAFDGVLQSNIM--LKILNLSGNPIGDEGAKTLCATL---MENS-- 254

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF--- 345
                ++++       + +EGAK +A + K+  TL  +E+  N I + G T+L+ A    
Sbjct: 255 -----SIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLEN 309

Query: 346 -------------------------EENKNLRHLNLN----------------------- 357
                                    E NK+LR L+L+                       
Sbjct: 310 NTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKV 369

Query: 358 ------DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
                 +N+I+ KGA  + + + +  SL  LNL    +   GA  IA  L  N ++  ++
Sbjct: 370 ALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATID 429

Query: 412 LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
           L  N I  +G   + +A+K+   +  + V  N  G +G + + +++K  G    L L
Sbjct: 430 LGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKL 486



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 165/380 (43%), Gaps = 45/380 (11%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L A   +  ++E +++    I   G   +++  + N  LR + LN+N I Y G   L  A
Sbjct: 246 LCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGA 305

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN 120
           L +  ++  L+L      + GA+++AK L  N +L +++L  N I  +G   L+  +  +
Sbjct: 306 LLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSH 365

Query: 121 KTKLKQINVSENQFGEEG---VEEMEKLMKSFGMAAALVLED--DEGECSDEEQDEESEE 175
           K K+  +++  N    +G   V E  K  KS  +   L + D  DEG     E+  +S +
Sbjct: 366 KGKVALLDLGNNSISAKGAFYVAEYIKRSKSL-VWLNLYMNDIGDEG----AEKIADSLK 420

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
           +N S A  D   L  N+  H+                  N    +LK  A +  L++  N
Sbjct: 421 QNRSIATID---LGGNNI-HAEGV---------------NAIAQALKDNAIITTLEVGYN 461

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
             GP G + L+++L+            N   L +  C++ +K      +  +   +   +
Sbjct: 462 PIGPDGAKALSEILK---------FHGNVKTLKLGWCQIAAKGAEHVADMLRYNNT---I 509

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--LR 352
            V     N L +EGA  LA   K + + L  V++  N I   G  A++ A + N++  + 
Sbjct: 510 SVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQALKANEDVTVT 569

Query: 353 HLNLNDNTITYKGAIPLGQA 372
            +NL +N IT  G   L  A
Sbjct: 570 SINLGNNFITKFGQSALTDA 589


>gi|291277984|gb|ADD91459.1| leucine rich repeat containing protein [Adineta vaga]
          Length = 316

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 81/161 (50%)

Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
           L L     G + + ++GA+++    +   TL  +++  N I H G   + DA   N  L 
Sbjct: 134 LTLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLS 193

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
            LNL  N + ++GA  +G AL    +L+ LNL    +   GA  I   L  NTTL  ++L
Sbjct: 194 TLNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDL 253

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             NEI  QG   +  A++  T L+ +N++ N+  ++G E +
Sbjct: 254 GYNEIGDQGAQLIGDALRINTTLRTLNLANNEIDDQGAEHI 294



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 72/147 (48%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           G N + ++GA+ +    +   TL  + +  N + H G   + DA   N  L  LNL  N 
Sbjct: 170 GYNEIGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQ 229

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           + ++GA  +G AL    +L  L+LG   +   GA  I   L  NTTL  +NL  NEI  Q
Sbjct: 230 VGHQGAQHIGDALRTNTTLTALDLGYNEIGDQGAQLIGDALRINTTLRTLNLANNEIDDQ 289

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGE 447
           G   +  A++  T L  +++  N+ G+
Sbjct: 290 GAEHIGDALRINTTLTTLDLGYNEIGD 316



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 68/132 (51%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++  N I H G   + DA   N  L  LNL  N + ++GA  +G AL    +L+ 
Sbjct: 163 TLTALDLGYNEIGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLST 222

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    +   GA  I   L  NTTL  ++L  NEI  QG   +  A++  T L+ +N++
Sbjct: 223 LNLRSNQVGHQGAQHIGDALRTNTTLTALDLGYNEIGDQGAQLIGDALRINTTLRTLNLA 282

Query: 131 ENQFGEEGVEEM 142
            N+  ++G E +
Sbjct: 283 NNEIDDQGAEHI 294



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 62/126 (49%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + +  N + H G   + DA   N  L  LNL  N + ++GA  +G AL    +L  
Sbjct: 191 TLSTLNLRSNQVGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTA 250

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+LG   +   GA  I   L  NTTL  +NL  NEI  QG   +  A++  T L  +++ 
Sbjct: 251 LDLGYNEIGDQGAQLIGDALRINTTLRTLNLANNEIDDQGAEHIGDALRINTTLTTLDLG 310

Query: 131 ENQFGE 136
            N+ G+
Sbjct: 311 YNEIGD 316



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G   + DA   N  L  L+L  N I ++GA  +G AL    +L+ LNL    +   GA  
Sbjct: 150 GAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQH 209

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           I   L  NTTL  +NL  N++  QG   +  A++  T L  +++  N+ G++G +
Sbjct: 210 IGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLGYNEIGDQGAQ 264



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 54/109 (49%)

Query: 53  KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 112
           +GA  +G AL    +L  L+LG   +   GA  I   L  NTTL  +NL  N++  QG  
Sbjct: 149 QGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQ 208

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
            +  A++  T L  +N+  NQ G +G + +   +++     AL L  +E
Sbjct: 209 HIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLGYNE 257



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 54/109 (49%)

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
           +GA  +G AL    +L  L+LG   +   GA  I   L  NTTL  +NL  N++  QG  
Sbjct: 149 QGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLSTLNLRSNQVGHQGAQ 208

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            +  A++  T L  +N+  NQ G +G + +   +++     AL L  +E
Sbjct: 209 HIGDALRTNTTLSTLNLRSNQVGHQGAQHIGDALRTNTTLTALDLGYNE 257



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
           +L  ++LG   +   GA  I   L  NTTL  ++L  NEI  QG   +  A++  T L  
Sbjct: 135 TLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLST 194

Query: 127 INVSENQFGEEGVEEMEKLMKS 148
           +N+  NQ G +G + +   +++
Sbjct: 195 LNLRSNQVGHQGAQHIGDALRT 216



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%)

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
           +L  ++LG   +   GA  I   L  NTTL  ++L  NEI  QG   +  A++  T L  
Sbjct: 135 TLTTIDLGCDEIGDQGAQLIGDALRINTTLTALDLGYNEIGHQGAQHIGDALRTNTTLST 194

Query: 438 INVSENQFGEEGVEEMEKLMKS 459
           +N+  NQ G +G + +   +++
Sbjct: 195 LNLRSNQVGHQGAQHIGDALRT 216


>gi|320165307|gb|EFW42206.1| protein kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 926

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 36/278 (12%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLR------------------SSCCFA----- 256
           +LK    L +++L++N FGP G   +A+ L                    S  FA     
Sbjct: 45  ALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVNYNEIGDAGSQAFADALKV 104

Query: 257 ---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              ++EL L NN +G  G + +S++L               L     G N + + GAK +
Sbjct: 105 NRTVKELLLQNNLIGEAGAQAISESLK----------VNRTLTTIGLGWNEIGDAGAKAI 154

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           +   K  ++L  + +    I  VG  A+++    N+ L  +   +N I   GA  + +AL
Sbjct: 155 SESLKVNRSLTCIGLTGTHIGTVGAQAIAEGLAVNRTLTSIGFGENQIGDAGAKAIAEAL 214

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               +L  ++L    +   GA +IA+ L  NTTL ++ L  N+I   G   + +A+K   
Sbjct: 215 KVNTTLTCISLIQSQIGDDGACAIAEALKVNTTLTEIVLYTNQIGDVGAQAIAEALKVNK 274

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
            + +I++ +NQ G+ G + + K +K       L L D+
Sbjct: 275 TVTKIHLQQNQIGDAGAKAIAKALKVNTTVTTLRLWDN 312



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 71/138 (51%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + +  N I   G  A+S++ + N+ L  + L    I   GA  + + L+   +L 
Sbjct: 134 RTLTTIGLGWNEIGDAGAKAISESLKVNRSLTCIGLTGTHIGTVGAQAIAEGLAVNRTLT 193

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            +  G+  +  AGA +IA+ L  NTTL  ++L  ++I   G   + +A+K  T L +I +
Sbjct: 194 SIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDDGACAIAEALKVNTTLTEIVL 253

Query: 130 SENQFGEEGVEEMEKLMK 147
             NQ G+ G + + + +K
Sbjct: 254 YTNQIGDVGAQAIAEALK 271



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 69/139 (49%)

Query: 22  IYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 81
           I  VG  A+++    N+ L  +   +N I   GA  + +AL    +L  ++L    +   
Sbjct: 174 IGTVGAQAIAEGLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDD 233

Query: 82  GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
           GA +IA+ L  NTTL ++ L  N+I   G   + +A+K    + +I++ +NQ G+ G + 
Sbjct: 234 GACAIAEALKVNTTLTEIVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQIGDAGAKA 293

Query: 142 MEKLMKSFGMAAALVLEDD 160
           + K +K       L L D+
Sbjct: 294 IAKALKVNTTVTTLRLWDN 312



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 142/339 (41%), Gaps = 49/339 (14%)

Query: 42  HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
           +L+L+D+ I    A  +G+AL    +L  +NL + L   AGAS+IA+ L+ N  L ++ +
Sbjct: 26  YLSLSDSLIRATEAQSVGEALKVNRTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYV 85

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             NEI   G      A+K    +K++ +  N  GE G + + + +K       + L  + 
Sbjct: 86  NYNEIGDAGSQAFADALKVNRTVKELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWN- 144

Query: 162 GECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSL 221
                        E  D+ A+  + +L  N S      +  +H  +  +   +      L
Sbjct: 145 -------------EIGDAGAKAISESLKVNRSLTCIGLTG-THIGTVGAQAIAE----GL 186

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLR---SSCCFALEELKLNNNGLGITGCKLLSKA 278
                L  +   +N  G  G + +A+ L+   +  C +L + ++ ++G     C +    
Sbjct: 187 AVNRTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDDG----ACAIAE-- 240

Query: 279 LHDCYESSKKEGSPLALKV------FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
                          ALKV       +   N++ + GA+ +A   K  KT+ ++ + QN 
Sbjct: 241 ---------------ALKVNTTLTEIVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQ 285

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
           I   G  A++ A + N  +  L L DN +T  G   L Q
Sbjct: 286 IGDAGAKAIAKALKVNTTVTTLRLWDNFLTKAGIKALKQ 324



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  A +DA + N+ ++ L L +N I   GA  + ++L    +L  + LG   + 
Sbjct: 88  NEIGDAGSQAFADALKVNRTVKELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWNEIG 147

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            AGA +I++ L  N +L  + LT   I   G   + + +     L  I   ENQ G+ G 
Sbjct: 148 DAGAKAISESLKVNRSLTCIGLTGTHIGTVGAQAIAEGLAVNRTLTSIGFGENQIGDAGA 207

Query: 140 EEMEKLMK 147
           + + + +K
Sbjct: 208 KAIAEALK 215



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +T++ + +  N I   G  A+S++ + N+ L  + L  N I   GA  + ++L    SL 
Sbjct: 106 RTVKELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWNEIGDAGAKAISESLKVNRSLT 165

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            + L    + + GA +IA+ L  N TL  +    N+I   G   + +A+K  T L  I++
Sbjct: 166 CIGLTGTHIGTVGAQAIAEGLAVNRTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISL 225

Query: 130 SENQFGEEG 138
            ++Q G++G
Sbjct: 226 IQSQIGDDG 234



 Score = 45.1 bits (105), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 67/135 (49%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  +   +N I   G  A+++A + N  L  ++L  + I   GA  + +AL    +L 
Sbjct: 190 RTLTSIGFGENQIGDAGAKAIAEALKVNTTLTCISLIQSQIGDDGACAIAEALKVNTTLT 249

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            + L    +   GA +IA+ L  N T+  ++L  N+I   G   + KA+K  T +  + +
Sbjct: 250 EIVLYTNQIGDVGAQAIAEALKVNKTVTKIHLQQNQIGDAGAKAIAKALKVNTTVTTLRL 309

Query: 130 SENQFGEEGVEEMEK 144
            +N   + G++ +++
Sbjct: 310 WDNFLTKAGIKALKQ 324



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + + +N     G +A+++    N+ L +L +N N I   G+     AL    ++ 
Sbjct: 50  RTLTKINLNENLFGPAGASAIAEGLSMNQGLTNLYVNYNEIGDAGSQAFADALKVNRTVK 109

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L + L+  AGA +I++ L  N TL  + L  NEI   G   + +++K    L  I +
Sbjct: 110 ELLLQNNLIGEAGAQAISESLKVNRTLTTIGLGWNEIGDAGAKAISESLKVNRSLTCIGL 169

Query: 130 SENQFGEEGVEEM 142
           +    G  G + +
Sbjct: 170 TGTHIGTVGAQAI 182



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 4/119 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + Q+ I   G  A+++A + N  L  + L  N I   GA  + +A
Sbjct: 210 IAEALKVNTTLTCISLIQSQIGDDGACAIAEALKVNTTLTEIVLYTNQIGDVGAQAIAEA 269

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    ++  ++L    +  AGA +IAK L  NTT+  + L  N ++  G    +KA+K 
Sbjct: 270 LKVNKTVTKIHLQQNQIGDAGAKAIAKALKVNTTVTTLRLWDNFLTKAG----IKALKQ 324


>gi|71421460|ref|XP_811808.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70876515|gb|EAN89957.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 702

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 18/214 (8%)

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           S   ++  L L  N  G+ G + L +A+         E +P  L+    GRN+L+++ A 
Sbjct: 61  STAHSIRVLNLEGNAFGMAGLQALLEAV---------EKNPGILRELRLGRNKLKDQAAV 111

Query: 312 MLAAVFKK----LKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGA 366
           ++     +    LK L+   + +N I  +G+  ++ A  +   ++  L+ ++N I    A
Sbjct: 112 VIGHALSRDGCGLKVLD---LSENDITKLGVIPIAAAIGDGSCDVVELSFHNNKIEADAA 168

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             LGQA+     L  L+LG   ++ AGA+ +A+ +    +L  ++LT N I   GG +L 
Sbjct: 169 TYLGQAIRHAGKLRHLHLGYNAIRDAGAAQLAQCIPVTVSLSTLDLTANRIGPSGGKELA 228

Query: 427 KA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +A M N   ++++N+  N F  E +E   +++K+
Sbjct: 229 RALMTNSCNMQRLNLRHNLFDSETIEMYAEVIKT 262



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 2/139 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ +++ +N I  +G+  ++ A  +    +  L+ ++N I    A  LGQA+     L  
Sbjct: 124 LKVLDLSENDITKLGVIPIAAAIGDGSCDVVELSFHNNKIEADAATYLGQAIRHAGKLRH 183

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA-MKNKTKLKQINV 129
           L+LG   ++ AGA+ +A+ +    +L  ++LT N I   GG +L +A M N   ++++N+
Sbjct: 184 LHLGYNAIRDAGAAQLAQCIPVTVSLSTLDLTANRIGPSGGKELARALMTNSCNMQRLNL 243

Query: 130 SENQFGEEGVEEMEKLMKS 148
             N F  E +E   +++K+
Sbjct: 244 RHNLFDSETIEMYAEVIKT 262


>gi|320169484|gb|EFW46383.1| protein kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 1064

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 11/223 (4%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
             D   GP G   +A+ L+ +    L  L L NN +G  G   L+  L    ESS+    
Sbjct: 53  FRDQEMGPKGAHVIAEELKVNTT--LVALGLYNNDIGPVGANELATVLGT--ESSR---- 104

Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
              L +     N + +EGA  +A   K  KTL ++ +  N I  VG  AL+ A + N +L
Sbjct: 105 ---LAILALFENHIGDEGAIAMALALKNNKTLTQLYLANNKIGEVGARALALALQTNSSL 161

Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
             L+L++N+I   GA+ + +AL+   S+  L L    +   GA +IA  LT N TL  + 
Sbjct: 162 TGLSLHENSIGDAGALAIAEALAVNTSMTELYLHTNGIGDPGAIAIATALTKNKTLTRLA 221

Query: 412 LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
           L  N I   G   +  A+K    L ++++ EN+   + V++ +
Sbjct: 222 LEQNNIGKAGAEKIAAALKENESLTELDLGENEIPSDVVKKFK 264



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 128/295 (43%), Gaps = 26/295 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I  VG  AL+ A + N  L  L+L++N+I   GA+ + +A
Sbjct: 123 MALALKNNKTLTQLYLANNKIGEVGARALALALQTNSSLTGLSLHENSIGDAGALAIAEA 182

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+   S+  L L    +   GA +IA  LT N TL  + L  N I   G   +  A+K  
Sbjct: 183 LAVNTSMTELYLHTNGIGDPGAIAIATALTKNKTLTRLALEQNNIGKAGAEKIAAALKEN 242

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             L ++++ EN+   + V    K  K+        +  D  + +   Q E S       A
Sbjct: 243 ESLTELDLGENEIPSDVV----KKFKAPSDKKKCTIRLDHQKSASVVQSEPSIVSIVGKA 298

Query: 182 EGDNSNL-SHNDSNHSHNASNQS--HNNSNQSHNTSNQSHMSLKTGAR------------ 226
              + NL S   +  +  A +++   N +    N  N +   +  GAR            
Sbjct: 299 TSGSLNLESKKIAELAMEAISRAIVTNGTITKMNLKNNTLADI--GARLLVENLVDSKLH 356

Query: 227 --LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
             LV L+L  N  G  G+  L  LL  S   AL+EL LN+N +G  G + ++  L
Sbjct: 357 LNLVSLNLDSNNIGNDGMGHLCKLLEGS---ALQELSLNHNWIGDAGAQAIASTL 408



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           +N I   G  A++ A + NK L  L L +N I   GA  L  AL    SL  L+L +  +
Sbjct: 112 ENHIGDEGAIAMALALKNNKTLTQLYLANNKIGEVGARALALALQTNSSLTGLSLHENSI 171

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEE 137
             AGA +IA+ L  NT++ ++ L  N I   G + +  A+ KNKT L ++ + +N  G+ 
Sbjct: 172 GDAGALAIAEALAVNTSMTELYLHTNGIGDPGAIAIATALTKNKT-LTRLALEQNNIGKA 230

Query: 138 GVEEMEKLMK 147
           G E++   +K
Sbjct: 231 GAEKIAAALK 240


>gi|59891397|tpg|DAA05659.1| TPA_inf: caterpillar 16.2 [Mus musculus]
          Length = 1205

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 12/230 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L+ LDL  N+ GP G + LAD L+ +    L  L L +N +   G   +++AL
Sbjct: 716 SLLVNRSLITLDLRSNSIGPPGAKALADALKIN--RTLTSLSLQSNVIKDDGVMCVAEAL 773

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 S +  S L L+     +N +   GA+ +A   K+ ++L+ +    N I   G  
Sbjct: 774 -----VSNQTISMLQLQ-----KNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAI 823

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL++A + N+ L +L+L  N+I+  G   L +AL    +L+ LNL +  +   GASS+A 
Sbjct: 824 ALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLQENAIGDEGASSVAG 883

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            L  NTTL  + L  N++   G   L  A+K  + L+++N+ EN  G +G
Sbjct: 884 ALKVNTTLIALYLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDG 933



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 80/170 (47%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N +   GAK LA   K  +TL  + +  N I   G+  +++A   N+ +  L L  N I 
Sbjct: 731 NSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIG 790

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  +  AL +  SL  L      +   GA ++A+ L  N  LE+++L  N IS  G 
Sbjct: 791 LIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGV 850

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             L++A+ +   L  +N+ EN  G+EG   +   +K      AL L  ++
Sbjct: 851 TVLMRALCSNQTLSSLNLQENAIGDEGASSVAGALKVNTTLIALYLRGND 900



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 75/160 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL  + +  N I   G+  +++A   N+ +  L L  N I   GA  +  A
Sbjct: 741 LADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADA 800

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L      +   GA ++A+ L  N  LE+++L  N IS  G   L++A+ + 
Sbjct: 801 LKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSN 860

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             L  +N+ EN  G+EG   +   +K      AL L  ++
Sbjct: 861 QTLSSLNLQENAIGDEGASSVAGALKVNTTLIALYLRGND 900



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ +    N I   G  AL++A + N+ L +L+L  N+I+  G   L +A
Sbjct: 797 MADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRA 856

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+ LNL +  +   GASS+A  L  NTTL  + L  N++   G   L  A+K  
Sbjct: 857 LCSNQTLSSLNLQENAIGDEGASSVAGALKVNTTLIALYLRGNDVGAAGAKALANALKLN 916

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
           + L+++N+ EN  G +G            +  A  L ++ G   D  Q +   ++NDS
Sbjct: 917 SSLRRLNLQENSLGMDG-----------AIFVASALSENHGSPHDPTQ-KNIRQDNDS 962



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 12/156 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L  S N  G  G   LA+ L+ +    LE L L +N +   G  +L +AL
Sbjct: 800 ALKQNRSLKALMFSSNTIGDRGAIALAEALKVN--QILENLDLQSNSISDMGVTVLMRAL 857

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 S +  S L L+      N + +EGA  +A   K   TL  + +  N +   G  
Sbjct: 858 -----CSNQTLSSLNLQ-----ENAIGDEGASSVAGALKVNTTLIALYLRGNDVGAAGAK 907

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           AL++A + N +LR LNL +N++   GAI +  ALS+
Sbjct: 908 ALANALKLNSSLRRLNLQENSLGMDGAIFVASALSE 943


>gi|4680192|gb|AAD27557.1|AF111710_3 hypothetical protein [Oryza sativa Indica Group]
          Length = 789

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 126/294 (42%), Gaps = 70/294 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA L  L++SDNA G  GV    +LL+S     LEEL + N+G+        ++AL +  
Sbjct: 214 GAVLRYLNISDNALGEKGVRAFEELLKSQD--NLEELYVMNDGISEEA----AQALSELI 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LK+     N   +EGA  +A + K+   LE        I   G  AL++
Sbjct: 268 PSTEK------LKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAE 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL----------------AILN---- 383
           A      L+ L+L DN    +  + L + LSKLP L                AI+N    
Sbjct: 322 ALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQ 381

Query: 384 ----------------------LGDCL---------------LKSAGASSIAKYLTD-NT 405
                                 L +CL               LK  GA  IAK L D + 
Sbjct: 382 SAPQLEVLEMAGNEINAKASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQ 441

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L++++++ N +   G     +A+ NK    Q+N++ N   +EG++E++ ++KS
Sbjct: 442 DLKELDVSTNMLQRVGARCFAQAIANKPGFVQLNINGNFISDEGIDEVKDILKS 495



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 8/217 (3%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           A + +  +N   GI    +    L    ES KK+ + + +  F+AGR   E+E   ++  
Sbjct: 154 AYKRICFSNRSFGIGAANVAGPIL----ESIKKQLTEVDISDFVAGRP--EDEALDVMRI 207

Query: 316 VFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
             K L+   L  + +  N +   G+ A  +  +   NL  L + ++ I+ + A  L + +
Sbjct: 208 FSKALEGAVLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELI 267

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
                L IL+  + +    GA  IA+ +  +  LE    +   I   GG+ L +A+   T
Sbjct: 268 PSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCT 327

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           +LK++++ +N FG E    + K +        L L D
Sbjct: 328 RLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +A + K+   LE        I   G  AL++A     +L+ L+L DN    +  + L +
Sbjct: 290 FIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAGLALSK 349

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMK 119
            LSKLP L  L L D  L++ G  +I   L  +   LE + +  NEI+ +    L + + 
Sbjct: 350 TLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAKASQALAECLT 409

Query: 120 NKTKLKQINVSENQFGEEG 138
               LK++ ++EN+  ++G
Sbjct: 410 AMQSLKKLTLAENELKDDG 428



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A+ +  +++  +L  L +  N I  K +  L +
Sbjct: 347 LSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAKASQALAE 406

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D +  L++++++ N +   G     +A+ 
Sbjct: 407 CLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQDLKELDVSTNMLQRVGARCFAQAIA 466

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           NK    Q+N++ N   +EG++E++ ++KS
Sbjct: 467 NKPGFVQLNINGNFISDEGIDEVKDILKS 495



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 66/149 (44%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A  +  +    L  L + ++ I+ + A  L + +     L I
Sbjct: 216 VLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKI 275

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  LE    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 276 LHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLR 335

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           +N FG E    + K +        L L D
Sbjct: 336 DNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 18/228 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG------ITGCKL 274
           +K G     +  S+ +FG IG   +A  +  S    L E+ +++   G      +   ++
Sbjct: 149 IKPGNAYKRICFSNRSFG-IGAANVAGPILESIKKQLTEVDISDFVAGRPEDEALDVMRI 207

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
            SKAL         EG+   L+      N L  +G +    + K    LE + +  +GI 
Sbjct: 208 FSKAL---------EGA--VLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGIS 256

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
                ALS+     + L+ L+ ++N    +GA+ + + + + P+L         + S G 
Sbjct: 257 EEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGG 316

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
            ++A+ L   T L+ ++L  N   V+ GL L K +     L ++ +S+
Sbjct: 317 VALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 61/127 (48%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + K    LE + +  +GI      ALS+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 238 LLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKR 297

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P+L         + S G  ++A+ L   T L+ ++L  N   V+ GL L K +     L
Sbjct: 298 SPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDL 357

Query: 125 KQINVSE 131
            ++ +S+
Sbjct: 358 VELYLSD 364


>gi|302799292|ref|XP_002981405.1| hypothetical protein SELMODRAFT_154424 [Selaginella moellendorffii]
 gi|300150945|gb|EFJ17593.1| hypothetical protein SELMODRAFT_154424 [Selaginella moellendorffii]
          Length = 448

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 188/454 (41%), Gaps = 61/454 (13%)

Query: 7   KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+L+T    +M        GI  LS +   NK L + + + N IT               
Sbjct: 9   KELQTFPEADMSGRKFGDEGIKILSSSLGYNKSLEYADFSANNIT--------------- 53

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
                        + G+S + KYL  N+ L+ +N++ N I   G   L   +     L++
Sbjct: 54  -------------AVGSSEMRKYLRANSHLKTLNMSGNPIGDDGAGVLCDFLFTNGTLEK 100

Query: 127 INVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           + ++     +EG + +   +KS      L L ++  +        E+   N +   G   
Sbjct: 101 LQLNSCNISDEGAKLLANALKSNQTLVVLELNNNTIDYPGFAAIAEALIVNKT-IRG--- 156

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLA 246
              H + N+       +     + +               L E+ L  N  G  G+  L 
Sbjct: 157 --VHLNGNYGGALGALALAKGLEQNKI-------------LREIHLHGNGMGNEGIRTLM 201

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
           + L SS    L  L + NN +G        K ++   E  KK  S   L +++   N + 
Sbjct: 202 EGLASSKA-KLSSLDIGNNSIG-------PKGVYYVAEYMKKSKSIQWLNLYM---NDIG 250

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           +EGA+ +A   K+ KT+  +++  N I   G T +++A ++N  +  L ++ N I   GA
Sbjct: 251 DEGAEKIAEALKRNKTISTIDIGGNNITAAGATHIANALKDNSTITSLEMSYNPIGGDGA 310

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             L + L    ++  L LG C +   GA++ A+ L  N+T+  ++L  N +  +G   L 
Sbjct: 311 KILAETLKHNGNVQTLRLGWCQIGVKGAAAFAECLQYNSTMSTLDLRANGLGDEGAAILA 370

Query: 427 KAMK--NKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +++K  N+T L  +++  N+  + G   + + +K
Sbjct: 371 RSLKVVNET-LTSLDLGFNEIRDNGAFALAQALK 403



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 169/368 (45%), Gaps = 39/368 (10%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE +++    I   G   L++A + N+ L  L LN+NTI Y G   + +AL    ++  
Sbjct: 97  TLEKLQLNSCNISDEGAKLLANALKSNQTLVVLELNNNTIDYPGFAAIAEALIVNKTIRG 156

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINV 129
           ++L      + GA ++AK L  N  L +++L  N +  +G   L++ +  +K KL  +++
Sbjct: 157 VHLNGNYGGALGALALAKGLEQNKILREIHLHGNGMGNEGIRTLMEGLASSKAKLSSLDI 216

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD--NSN 187
             N  G +GV  + + MK       L L  ++      E+  E+ + N + +  D   +N
Sbjct: 217 GNNSIGPKGVYYVAEYMKKSKSIQWLNLYMNDIGDEGAEKIAEALKRNKTISTIDIGGNN 276

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
           ++   + H  NA                     LK  + +  L++S N  G  G + LA+
Sbjct: 277 ITAAGATHIANA---------------------LKDNSTITSLEMSYNPIGGDGAKILAE 315

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
            L+ +    ++ L+L    +G+ G    ++ L   Y S+    S L L+      N L +
Sbjct: 316 TLKHNG--NVQTLRLGWCQIGVKGAAAFAECLQ--YNSTM---STLDLRA-----NGLGD 363

Query: 308 EGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--LRHLNLNDNTITYK 364
           EGA +LA   K + +TL  +++  N I   G  AL+ A + N +  +  LNL +N  T  
Sbjct: 364 EGAAILARSLKVVNETLTSLDLGFNEIRDNGAFALAQALKNNVDAAVTTLNLMNNFFTKY 423

Query: 365 GAIPLGQA 372
           G + L +A
Sbjct: 424 GKVALTEA 431



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ KT+  +++  N I   G T +++A ++N  +  L ++ N I   GA  L + 
Sbjct: 257 IAEALKRNKTISTIDIGGNNITAAGATHIANALKDNSTITSLEMSYNPIGGDGAKILAET 316

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-- 119
           L    ++  L LG C +   GA++ A+ L  N+T+  ++L  N +  +G   L +++K  
Sbjct: 317 LKHNGNVQTLRLGWCQIGVKGAAAFAECLQYNSTMSTLDLRANGLGDEGAAILARSLKVV 376

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
           N+T L  +++  N+  + G   + + +K
Sbjct: 377 NET-LTSLDLGFNEIRDNGAFALAQALK 403



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 70/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   KK K+++ + +  N I   G   +++A + NK +  +++  N IT  GA  +  A
Sbjct: 229 VAEYMKKSKSIQWLNLYMNDIGDEGAEKIAEALKRNKTISTIDIGGNNITAAGATHIANA 288

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L +    +   GA  +A+ L  N  ++ + L   +I V+G     + ++  
Sbjct: 289 LKDNSTITSLEMSYNPIGGDGAKILAETLKHNGNVQTLRLGWCQIGVKGAAAFAECLQYN 348

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + +  +++  N  G+EG   + + +K
Sbjct: 349 STMSTLDLRANGLGDEGAAILARSLK 374


>gi|146093389|ref|XP_001466806.1| ribonuclease inhibitor-like protein [Leishmania infantum JPCM5]
 gi|134071169|emb|CAM69855.1| ribonuclease inhibitor-like protein [Leishmania infantum JPCM5]
          Length = 736

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 182/437 (41%), Gaps = 39/437 (8%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           +P+NG       AL+     N     L+L+ N +   GA  + Q + +  +L  +++   
Sbjct: 150 LPENGFGVCSAEALAAVLSRNSHYSVLDLSGNCLRDDGARFIAQLIKRNRTLVHIDVASN 209

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTC------NEISVQGGLDLVKAMKNKTKLKQINVS 130
            +   G   IA+ L +N T+  +++        N I   G   + + ++    L ++NVS
Sbjct: 210 DIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRCNEVLARLNVS 269

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N  G  GV  +   ++  G    L L                   N+   EG     S 
Sbjct: 270 SNGLGAGGVAFIASALERNGSLTRLNLSS-----------------NNLGLEGARVLASA 312

Query: 191 NDSNH-SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVE-LDLSDNAFGPIGVEGLADL 248
            ++ H +H    ++H +        N    +++ G  +VE LDL +NA G    +    +
Sbjct: 313 LEAAHVTHWELQRNHLDDKGGACFLNALAGAIRNGHDVVEYLDLDNNALGEGCADAAGKV 372

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L  S   +L  L+L  N LG  G K +S  L++ +          +L      +  +++ 
Sbjct: 373 LAVSA--SLTTLRLCGNPLG-AGVKAISTGLNENH----------SLNSLYLSKCSIDHI 419

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA  L AV     TL  ++M  N +   G   L+     NK L   NL+ N I + G + 
Sbjct: 420 GAAALGAVLCVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAGGLE 479

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +A+ K  +L  LNL   L+  A   +I+     N TLE +++  N+ S    + + +A
Sbjct: 480 MAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRSNNTLERLDVAYNDFSYACAMSIERA 539

Query: 429 M-KNKTKLKQINVSENQ 444
           + +N+   K + V + Q
Sbjct: 540 LERNRASNKTLLVPKLQ 556



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 6/125 (4%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNL------NDNTITYKG 54
            +A + K+ +TL H+++  N I HVG   ++ A  EN  +  L++      N N I   G
Sbjct: 190 FIAQLIKRNRTLVHIDVASNDIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPG 249

Query: 55  AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
           A  +G+ L     LA LN+    L + G + IA  L  N +L  +NL+ N + ++G   L
Sbjct: 250 AEAIGEVLRCNEVLARLNVSSNGLGAGGVAFIASALERNGSLTRLNLSSNNLGLEGARVL 309

Query: 115 VKAMK 119
             A++
Sbjct: 310 ASALE 314



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 66/137 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L  + + +  I H+G  AL      N  LRHL++++N +   GA+ L + L+    L  
Sbjct: 405 SLNSLYLSKCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTT 464

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            NL    +  AG   +AK +  N TL  +NL  N +    G  +  + ++   L++++V+
Sbjct: 465 WNLSSNRIGHAGGLEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRSNNTLERLDVA 524

Query: 131 ENQFGEEGVEEMEKLMK 147
            N F       +E+ ++
Sbjct: 525 YNDFSYACAMSIERALE 541



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 1/133 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L AV     TL H++M  N +   G   L+     NK L   NL+ N I + G + + +A
Sbjct: 424 LGAVLCVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAGGLEMAKA 483

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN 120
           + K  +L  LNL   L+  A   +I+     N TLE +++  N+ S    + + +A+ +N
Sbjct: 484 VQKNRTLRHLNLRRNLMLEATGEAISDSFRSNNTLERLDVAYNDFSYACAMSIERALERN 543

Query: 121 KTKLKQINVSENQ 133
           +   K + V + Q
Sbjct: 544 RASNKTLLVPKLQ 556


>gi|241626364|ref|XP_002407907.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215501083|gb|EEC10577.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 450

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 78/152 (51%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
            GA+  A + KK KTL RV + +  +   G  A++ A   N  L+HL +  N+IT  GA 
Sbjct: 241 RGAQRFAELLKKNKTLLRVSLFKTKLKDKGAVAIAGALATNDTLQHLMMGGNSITLTGAK 300

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
            L  +L     L  L+L D  L + GA S A+ L  N TL+++ L  N I  +G + +  
Sbjct: 301 ALASSLEANSCLLTLDLRDNYLGTNGAISFARMLLLNQTLQELYLCGNSIGDEGVVAIAD 360

Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           ++     L  +++  + FG+ GV  + +L+ S
Sbjct: 361 SLAANETLHTLSIHASNFGDSGVAALARLLSS 392



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 74/147 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A + KK KTL  V + +  +   G  A++ A   N  L+HL +  N+IT  GA  L  +
Sbjct: 246 FAELLKKNKTLLRVSLFKTKLKDKGAVAIAGALATNDTLQHLMMGGNSITLTGAKALASS 305

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L D  L + GA S A+ L  N TL+++ L  N I  +G + +  ++   
Sbjct: 306 LEANSCLLTLDLRDNYLGTNGAISFARMLLLNQTLQELYLCGNSIGDEGVVAIADSLAAN 365

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
             L  +++  + FG+ GV  + +L+ S
Sbjct: 366 ETLHTLSIHASNFGDSGVAALARLLSS 392


>gi|115465205|ref|NP_001056202.1| Os05g0543200 [Oryza sativa Japonica Group]
 gi|52353428|gb|AAU43996.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113579753|dbj|BAF18116.1| Os05g0543200 [Oryza sativa Japonica Group]
 gi|215769086|dbj|BAH01315.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632425|gb|EEE64557.1| hypothetical protein OsJ_19409 [Oryza sativa Japonica Group]
          Length = 544

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 126/294 (42%), Gaps = 70/294 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA L  L++SDNA G  GV    +LL+S     LEEL + N+G+        ++AL +  
Sbjct: 214 GAVLRYLNISDNALGEKGVRAFEELLKSQD--NLEELYVMNDGISEEA----AQALSELI 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LK+     N   +EGA  +A + K+   LE        I   G  AL++
Sbjct: 268 PSTEK------LKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAE 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL----------------AILN---- 383
           A      L+ L+L DN    +  + L + LSKLP L                AI+N    
Sbjct: 322 ALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQ 381

Query: 384 ----------------------LGDCL---------------LKSAGASSIAKYLTD-NT 405
                                 L +CL               LK  GA  IAK L D + 
Sbjct: 382 SAPQLEVLEMAGNEINAKASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQ 441

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L++++++ N +   G     +A+ NK    Q+N++ N   +EG++E++ ++KS
Sbjct: 442 DLKELDVSTNMLQRVGARCFAQAIANKPGFVQLNINGNFISDEGIDEVKDILKS 495



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 8/217 (3%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           A + +  +N   GI    +    L    ES KK+ + + +  F+AGR   E+E   ++  
Sbjct: 154 AYKRICFSNRSFGIGAANVAGPIL----ESIKKQLTEVDISDFVAGRP--EDEALDVMRI 207

Query: 316 VFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
             K L+   L  + +  N +   G+ A  +  +   NL  L + ++ I+ + A  L + +
Sbjct: 208 FSKALEGAVLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELI 267

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
                L IL+  + +    GA  IA+ +  +  LE    +   I   GG+ L +A+   T
Sbjct: 268 PSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCT 327

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           +LK++++ +N FG E    + K +        L L D
Sbjct: 328 RLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +A + K+   LE        I   G  AL++A     +L+ L+L DN    +  + L +
Sbjct: 290 FIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAGLALSK 349

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMK 119
            LSKLP L  L L D  L++ G  +I   L  +   LE + +  NEI+ +    L + + 
Sbjct: 350 TLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAKASQALAECLT 409

Query: 120 NKTKLKQINVSENQFGEEG 138
               LK++ ++EN+  ++G
Sbjct: 410 AMQSLKKLTLAENELKDDG 428



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A+ +  +++  +L  L +  N I  K +  L +
Sbjct: 347 LSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAKASQALAE 406

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D +  L++++++ N +   G     +A+ 
Sbjct: 407 CLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQDLKELDVSTNMLQRVGARCFAQAIA 466

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           NK    Q+N++ N   +EG++E++ ++KS
Sbjct: 467 NKPGFVQLNINGNFISDEGIDEVKDILKS 495



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 66/149 (44%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A  +  +    L  L + ++ I+ + A  L + +     L I
Sbjct: 216 VLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKI 275

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  LE    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 276 LHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLR 335

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           +N FG E    + K +        L L D
Sbjct: 336 DNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 18/228 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG------ITGCKL 274
           +K G     +  S+ +FG IG   +A  +  S    L E+ +++   G      +   ++
Sbjct: 149 IKPGNAYKRICFSNRSFG-IGAANVAGPILESIKKQLTEVDISDFVAGRPEDEALDVMRI 207

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
            SKAL         EG+   L+      N L  +G +    + K    LE + +  +GI 
Sbjct: 208 FSKAL---------EGA--VLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGIS 256

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
                ALS+     + L+ L+ ++N    +GA+ + + + + P+L         + S G 
Sbjct: 257 EEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGG 316

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
            ++A+ L   T L+ ++L  N   V+ GL L K +     L ++ +S+
Sbjct: 317 VALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 61/127 (48%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + K    LE + +  +GI      ALS+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 238 LLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKR 297

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P+L         + S G  ++A+ L   T L+ ++L  N   V+ GL L K +     L
Sbjct: 298 SPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDL 357

Query: 125 KQINVSE 131
            ++ +S+
Sbjct: 358 VELYLSD 364


>gi|407853150|gb|EKG06253.1| hypothetical protein TCSYLVIO_002656 [Trypanosoma cruzi]
          Length = 696

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 18/214 (8%)

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           S   ++  L L  N  G+ G + L +A+         E +P  L+    GRN+L+++ A 
Sbjct: 61  STAHSIRVLNLEGNAFGMAGLQALLEAV---------EKNPGILRELRLGRNKLKDQAAV 111

Query: 312 MLAAVFKK----LKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGA 366
           ++     +    LK L+   + +N I  +G+  ++ A  +   ++  L+ ++N I    A
Sbjct: 112 VIGHALSRDGCGLKVLD---LSENDITKLGVIPIAAAIGDGSCDVVELSFHNNKIEADAA 168

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             LGQA+     L  L+LG   ++ AGA+ +A+ +    +L  ++LT N I   GG +L 
Sbjct: 169 TYLGQAIRHAGKLRHLHLGYNAIRDAGAAQLAQCIPVTVSLSTLDLTANRIGPSGGKELA 228

Query: 427 KA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +A M N   ++++N+  N F  E +E   +++K+
Sbjct: 229 RALMTNSCNMQRLNLRHNLFDSETIEMYAEVIKT 262



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 2/139 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ +++ +N I  +G+  ++ A  +    +  L+ ++N I    A  LGQA+     L  
Sbjct: 124 LKVLDLSENDITKLGVIPIAAAIGDGSCDVVELSFHNNKIEADAATYLGQAIRHAGKLRH 183

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA-MKNKTKLKQINV 129
           L+LG   ++ AGA+ +A+ +    +L  ++LT N I   GG +L +A M N   ++++N+
Sbjct: 184 LHLGYNAIRDAGAAQLAQCIPVTVSLSTLDLTANRIGPSGGKELARALMTNSCNMQRLNL 243

Query: 130 SENQFGEEGVEEMEKLMKS 148
             N F  E +E   +++K+
Sbjct: 244 RHNLFDSETIEMYAEVIKT 262


>gi|301616926|ref|XP_002937900.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Xenopus (Silurana) tropicalis]
          Length = 954

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 13/199 (6%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L+L+NN +   G K     L  C+           L V     N++ +EGAK+L     K
Sbjct: 693 LELDNNNINDYGVK----ELIPCFSK---------LTVIRLSVNQITDEGAKVLYEELTK 739

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            K +  + + +N I   G   ++   EE   L+ + L  N  T +G   +G+A+    S+
Sbjct: 740 YKVITFLGLYKNLITDFGAQFIARIIEECPKLKRVKLGYNRFTGEGGTYIGRAILNSTSI 799

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
             + +    +   GA + A+ +T++++L  ++L CN IS +GG  + +A++  T LK + 
Sbjct: 800 CDIGMWGNEIGDVGACAFAEAITNHSSLTHLSLACNGISTEGGKSIAEALQQNTSLKILW 859

Query: 440 VSENQFGEEGVEEMEKLMK 458
           ++EN+  +E  E   K++K
Sbjct: 860 LTENKLTDEAAEHFAKMVK 878



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 75/140 (53%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K K +  + + +N I   G   ++   EE  KL+ + L  N  T +G   +G+A+    S
Sbjct: 739 KYKVITFLGLYKNLITDFGAQFIARIIEECPKLKRVKLGYNRFTGEGGTYIGRAILNSTS 798

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           +  + +    +   GA + A+ +T++++L  ++L CN IS +GG  + +A++  T LK +
Sbjct: 799 ICDIGMWGNEIGDVGACAFAEAITNHSSLTHLSLACNGISTEGGKSIAEALQQNTSLKIL 858

Query: 128 NVSENQFGEEGVEEMEKLMK 147
            ++EN+  +E  E   K++K
Sbjct: 859 WLTENKLTDEAAEHFAKMVK 878



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 16/200 (8%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L  N +   G + +++ + +C         P  LK    G NR   EG   +      
Sbjct: 746 LGLYKNLITDFGAQFIARIIEEC---------P-KLKRVKLGYNRFTGEGGTYIGRAILN 795

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             ++  + M  N I  VG  A ++A   + +L HL+L  N I+ +G   + +AL +  SL
Sbjct: 796 STSICDIGMWGNEIGDVGACAFAEAITNHSSLTHLSLACNGISTEGGKSIAEALQQNTSL 855

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            IL L +  L    A   AK +  N TL  + L  N+I+  G   L +A+++ T +++I 
Sbjct: 856 KILWLTENKLTDEAAEHFAKMVKVNKTLRHLWLVNNQITNHGAELLSEALQHNTVMEEI- 914

Query: 440 VSENQFGEEGVEEMEKLMKS 459
                +  + VE+  KLM S
Sbjct: 915 -----WEYQAVEKQAKLMPS 929



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 3/124 (2%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +E+  N I   G+  L   F    KL  + L+ N IT +GA  L + L+K   +  L L 
Sbjct: 693 LELDNNNINDYGVKELIPCFS---KLTVIRLSVNQITDEGAKVLYEELTKYKVITFLGLY 749

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
             L+   GA  IA+ + +   L+ V L  N  + +GG  + +A+ N T +  I +  N+ 
Sbjct: 750 KNLITDFGAQFIARIIEECPKLKRVKLGYNRFTGEGGTYIGRAILNSTSICDIGMWGNEI 809

Query: 135 GEEG 138
           G+ G
Sbjct: 810 GDVG 813



 Score = 39.3 bits (90), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +A + ++   L+ V++  N     G T +  A   +  +  + +  N I   GA    +
Sbjct: 760 FIARIIEECPKLKRVKLGYNRFTGEGGTYIGRAILNSTSICDIGMWGNEIGDVGACAFAE 819

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A++   SL  L+L    + + G  SIA+ L  NT+L+ + LT N+++ +      K +K 
Sbjct: 820 AITNHSSLTHLSLACNGISTEGGKSIAEALQQNTSLKILWLTENKLTDEAAEHFAKMVKV 879

Query: 121 KTKLKQINVSENQFGEEGVE 140
              L+ + +  NQ    G E
Sbjct: 880 NKTLRHLWLVNNQITNHGAE 899


>gi|297817654|ref|XP_002876710.1| RANGAP1 [Arabidopsis lyrata subsp. lyrata]
 gi|297322548|gb|EFH52969.1| RANGAP1 [Arabidopsis lyrata subsp. lyrata]
          Length = 531

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G++L  L+LSDNA G  G+   A L++S     LEEL L N+G+        ++A+ +  
Sbjct: 204 GSKLRYLNLSDNALGEKGIRAFASLIKSQN--DLEELYLMNDGISEDA----ARAVRELL 257

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S+ K      ++V     N   +EGA  +A + +   +LE        I   G  AL++
Sbjct: 258 PSTGK------IRVLQFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAE 311

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKL--------------------------- 376
           A E   +L+ L+L DN    +G I L + LS L                           
Sbjct: 312 ALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLK 371

Query: 377 --PSLAIL-------------NLGDCL---------------LKSAGASSIAKYLTDNTT 406
             PSL +L             NL  C+               LK  G   IAK +  +  
Sbjct: 372 SAPSLEVLELAGNDITVKSAGNLAACIASKQSLSKLNLSENELKDEGTILIAKAVEGHDQ 431

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+L+ N I   G   L + +  K   K +N++ N   EEG++E+  + K
Sbjct: 432 LVEVDLSTNMIRRAGARALAQTVVKKHTFKLLNINGNFISEEGIDEVNDMFK 483



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 3/176 (1%)

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           SS  EGS L  +      N L  +G +  A++ K    LE + +  +GI      A+ + 
Sbjct: 199 SSALEGSKL--RYLNLSDNALGEKGIRAFASLIKSQNDLEELYLMNDGISEDAARAVREL 256

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
                 +R L  ++N    +GAI + + +   PSL         + S G  ++A+ L   
Sbjct: 257 LPSTGKIRVLQFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAEALEHC 316

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKS 459
           + L+ ++L  N   V+GG+ L K +   T L +I +S     +EG E + E L+KS
Sbjct: 317 SHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLKS 372



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A++ K    LE + +  +GI      A+ +      K+R L  ++N    +GAI + + 
Sbjct: 225 FASLIKSQNDLEELYLMNDGISEDAARAVRELLPSTGKIRVLQFHNNMTGDEGAIAIAEI 284

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +   PSL         + S G  ++A+ L   + L+ ++L  N   V+GG+ L K +   
Sbjct: 285 VRHCPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVL 344

Query: 122 TKLKQINVSENQFGEEGVEEM-EKLMKS 148
           T L +I +S     +EG E + E L+KS
Sbjct: 345 THLTEIYMSYLNLEDEGAEALSEALLKS 372



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 14/265 (5%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L ++ +  N +   GI A +   +    L  L L ++ I+   A  + + L     + +L
Sbjct: 207 LRYLNLSDNALGEKGIRAFASLIKSQNDLEELYLMNDGISEDAARAVRELLPSTGKIRVL 266

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
              + +    GA +IA+ +    +LED   +   I  +GG+ L +A+++ + LK++++ +
Sbjct: 267 QFHNNMTGDEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRD 326

Query: 132 NQFGEEGVEEMEKLMKSFG-----MAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           N FG EG   + K +           + L LED+  E   E   + +      +  G++ 
Sbjct: 327 NMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLKSAPSLEVLELAGNDI 386

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGA-----RLVELDLSDNAFGPIG 241
            +    +  +  AS QS +  N S N        L   A     +LVE+DLS N     G
Sbjct: 387 TVKSAGNLAACIASKQSLSKLNLSENELKDEGTILIAKAVEGHDQLVEVDLSTNMIRRAG 446

Query: 242 VEGLADLLRSSCCFALEELKLNNNG 266
              LA  +     F L    LN NG
Sbjct: 447 ARALAQTVVKKHTFKL----LNING 467



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA     L  L  + M    +   G  ALS+A  +    L  L L  N IT K A  L  
Sbjct: 337 LAKTLSVLTHLTEIYMSYLNLEDEGAEALSEALLKSAPSLEVLELAGNDITVKSAGNLAA 396

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            ++   SL+ LNL +  LK  G   IAK +  +  L +V+L+ N I   G   L + +  
Sbjct: 397 CIASKQSLSKLNLSENELKDEGTILIAKAVEGHDQLVEVDLSTNMIRRAGARALAQTVVK 456

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K   K +N++ N   EEG++E+  + K
Sbjct: 457 KHTFKLLNINGNFISEEGIDEVNDMFK 483



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 38/179 (21%)

Query: 307 NEGAKMLAAVFKKLK-TLERVEM-------PQNGIYHVGITALSDAFEENKNLRHLNLND 358
           +E AK  A+V   +K  L  V++       P+     V +   S A E +K LR+LNL+D
Sbjct: 157 SEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEAEALEV-MNMFSSALEGSK-LRYLNLSD 214

Query: 359 NTITYKGAIPLGQALSK-------------------------LPS---LAILNLGDCLLK 390
           N +  KG       +                           LPS   + +L   + +  
Sbjct: 215 NALGEKGIRAFASLIKSQNDLEELYLMNDGISEDAARAVRELLPSTGKIRVLQFHNNMTG 274

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             GA +IA+ +    +LED   +   I  +GG+ L +A+++ + LK++++ +N FG EG
Sbjct: 275 DEGAIAIAEIVRHCPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEG 333


>gi|291239051|ref|XP_002739438.1| PREDICTED: leucine rich repeat containing 45-like [Saccoglossus
           kowalevskii]
          Length = 546

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 12/240 (5%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L     +++L+L+DN     G + +AD+L+ +C  A  EL L++N L   G K ++  
Sbjct: 167 ITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIA--ELDLSDNRLSDDGAKAMADM 224

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L        KE   L   V +AG N   ++ A+  A V  +   LE + + +N       
Sbjct: 225 L--------KENVNLH-SVTLAG-NGFGDKSAEGFAEVILQNSKLENMNLSRNSFSEAAG 274

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             L  A  EN  +R L+L+ N I  KGA+ L + +     L  ++L    L + GA +I 
Sbjct: 275 LLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSWNGLGNEGALAIG 334

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L  N +LE+++LT N IS +G + L K +     L+ + V +N     G   + K +K
Sbjct: 335 EALKMNNSLEELDLTNNRISPEGAVLLAKGLAVNETLRVLKVGKNPMQTAGCYGIVKAVK 394



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 18/225 (8%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLN--NNGLGITGCKLLSKALHD-CYES 285
           EL +  +  GP G   +A  L ++       LKLN  +N L   G + ++  L + CY  
Sbjct: 149 ELTMKHHGLGPAGARAIAITLVANTTI----LKLNLADNWLDSEGGQAVADMLKENCY-- 202

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                    +       NRL ++GAK +A + K+   L  V +  NG         ++  
Sbjct: 203 ---------IAELDLSDNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVI 253

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
            +N  L ++NL+ N+ +    + LG A+S+  ++  L+L    ++  GA ++AK +  N 
Sbjct: 254 LQNSKLENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNI 313

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            L  V+L+ N +  +G L + +A+K    L++++++ N+   EG 
Sbjct: 314 GLRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGA 358



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 24/260 (9%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL- 279
           LK    + ELDLSDN     G + +AD+L+ +    L  + L  NG G    +  ++ + 
Sbjct: 197 LKENCYIAELDLSDNRLSDDGAKAMADMLKENVN--LHSVTLAGNGFGDKSAEGFAEVIL 254

Query: 280 -------HDCYESSKKEGSPLALKVFIA----------GRNRLENEGAKMLAAVFKKLKT 322
                   +   +S  E + L L   I+            N +  +GA  LA        
Sbjct: 255 QNSKLENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIG 314

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           L +V++  NG+ + G  A+ +A + N +L  L+L +N I+ +GA+ L + L+   +L +L
Sbjct: 315 LRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAVLLAKGLAVNETLRVL 374

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD----LVKAMKNKTKLKQI 438
            +G   +++AG   I K + +N       L  ++I V    D     +K ++   K+K  
Sbjct: 375 KVGKNPMQTAGCYGIVKAVKENANTAIEQLDFSDIQVNKDFDELFMQLKEVRPDIKVKHG 434

Query: 439 NVSENQFGEEGVEEMEKLMK 458
              E +  +  V  M+KL K
Sbjct: 435 GSEEEKKKKAKVNPMQKLQK 454



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 72/138 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   L  V +  NG         ++   +N KL ++NL+ N+ +    + LG A
Sbjct: 221 MADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSFSEAAGLLLGPA 280

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +S+  ++  L+L    ++  GA ++AK +  N  L  V+L+ N +  +G L + +A+K  
Sbjct: 281 ISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSWNGLGNEGALAIGEALKMN 340

Query: 122 TKLKQINVSENQFGEEGV 139
             L++++++ N+   EG 
Sbjct: 341 NSLEELDLTNNRISPEGA 358



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A V  +   LE++ + +N         L  A  EN  +R L+L+ N I  KGA+ L + 
Sbjct: 249 FAEVILQNSKLENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKG 308

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +     L  ++L    L + GA +I + L  N +LE+++LT N IS +G + L K +   
Sbjct: 309 IGSNIGLRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAVLLAKGLAVN 368

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L+ + V +N     G   + K +K
Sbjct: 369 ETLRVLKVGKNPMQTAGCYGIVKAVK 394



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  V++  NG+ + G  A+ +A + N  L  L+L +N I+ +GA+ L + L+   +L +L
Sbjct: 315 LRKVDLSWNGLGNEGALAIGEALKMNNSLEELDLTNNRISPEGAVLLAKGLAVNETLRVL 374

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD----LVKAMKNKTKLKQI 127
            +G   +++AG   I K + +N       L  ++I V    D     +K ++   K+K  
Sbjct: 375 KVGKNPMQTAGCYGIVKAVKENANTAIEQLDFSDIQVNKDFDELFMQLKEVRPDIKVKHG 434

Query: 128 NVSENQFGEEGVEEMEKLMK 147
              E +  +  V  M+KL K
Sbjct: 435 GSEEEKKKKAKVNPMQKLQK 454



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           M  +G+   G  A++     N  +  LNL DN +  +G   +   L +   +A L+L D 
Sbjct: 152 MKHHGLGPAGARAIAITLVANTTILKLNLADNWLDSEGGQAVADMLKENCYIAELDLSDN 211

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
            L   GA ++A  L +N  L  V L  N    +      + +   +KL+ +N+S N F E
Sbjct: 212 RLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSFSE 271



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  + +  N +   G  A++D  +EN  +  L+L+DN ++  GA  +   L +  +L  
Sbjct: 174 TILKLNLADNWLDSEGGQAVADMLKENCYIAELDLSDNRLSDDGAKAMADMLKENVNLHS 233

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           + L         A   A+ +  N+ LE++NL+ N  S   GL L  A+     ++Q+++S
Sbjct: 234 VTLAGNGFGDKSAEGFAEVILQNSKLENMNLSRNSFSEAAGLLLGPAISENITIRQLDLS 293

Query: 131 ENQFGEEGVEEMEK 144
            N    +G   + K
Sbjct: 294 WNHIRRKGAVALAK 307



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 59/128 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +  +++  N +   G  A++D  +EN  L  + L  N    K A    + + +   L  +
Sbjct: 203 IAELDLSDNRLSDDGAKAMADMLKENVNLHSVTLAGNGFGDKSAEGFAEVILQNSKLENM 262

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL       A    +   +++N T+  ++L+ N I  +G + L K + +   L+++++S 
Sbjct: 263 NLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRKGAVALAKGIGSNIGLRKVDLSW 322

Query: 132 NQFGEEGV 139
           N  G EG 
Sbjct: 323 NGLGNEGA 330



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 24/247 (9%)

Query: 51  TYK------GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 104
           TYK      G +P+   L  +   + L +    L  AGA +IA  L  NTT+  +NL  N
Sbjct: 125 TYKEACKMNGVVPVSYFLRHIVD-SELTMKHHGLGPAGARAIAITLVANTTILKLNLADN 183

Query: 105 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGEC 164
            +  +GG  +   +K    + ++++S+N+  ++G + M  ++K      ++ L    G  
Sbjct: 184 WLDSEGGQAVADMLKENCYIAELDLSDNRLSDDGAKAMADMLKENVNLHSVTL---AGNG 240

Query: 165 SDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHN-------ASNQSHNNSNQSHN-TSNQ 216
             ++  E   E    +++ +N NLS N  + +         + N +    + S N    +
Sbjct: 241 FGDKSAEGFAEVILQNSKLENMNLSRNSFSEAAGLLLGPAISENITIRQLDLSWNHIRRK 300

Query: 217 SHMSLKTG----ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
             ++L  G      L ++DLS N  G  G   + + L+ +   +LEEL L NN +   G 
Sbjct: 301 GAVALAKGIGSNIGLRKVDLSWNGLGNEGALAIGEALKMNN--SLEELDLTNNRISPEGA 358

Query: 273 KLLSKAL 279
            LL+K L
Sbjct: 359 VLLAKGL 365



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 362 TYK------GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           TYK      G +P+   L  +   + L +    L  AGA +IA  L  NTT+  +NL  N
Sbjct: 125 TYKEACKMNGVVPVSYFLRHIVD-SELTMKHHGLGPAGARAIAITLVANTTILKLNLADN 183

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +  +GG  +   +K    + ++++S+N+  ++G + M  ++K
Sbjct: 184 WLDSEGGQAVADMLKENCYIAELDLSDNRLSDDGAKAMADMLK 226


>gi|449452044|ref|XP_004143770.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3-like [Cucumis
           sativus]
          Length = 602

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 189/401 (47%), Gaps = 31/401 (7%)

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           N GD      G   +A+ L  N T+E+VN + N I+ +G       +++   LK +++S 
Sbjct: 181 NFGD-----EGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNIILKTLDLSG 235

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEE-ENDSDAEGDNSNLSH 190
           N  G++GV+ +  L+ +      L L  +  +  DE     SE  +N+S        L++
Sbjct: 236 NPIGDDGVKTLCDLLVNNSSIETLRL--NSTDVGDEGAKAVSEMLKNNSSLR--IIELNN 291

Query: 191 NDSNHSHNASNQSHNNSNQS-HNTSNQSHM--------SLKTGARLVELDLSDNAFGPIG 241
           N  ++S   S    NN+ ++ H T N             L+    L EL L+ N+ G  G
Sbjct: 292 NMIDYSGFTSLXLENNTIRNIHLTGNYGGALGANALAKGLEGNKSLRELHLNGNSIGDEG 351

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           V  L   L SS    L  L + NN +   G      A H   E  K+  S + L +++  
Sbjct: 352 VRTLISGL-SSRKGKLALLDIGNNSITAKG------AFH-VAEFVKRTKSLVLLNLYM-- 401

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
            N + +EGA+ +A   K+ +T++ +++  N I+  GI+ ++ A ++N  +  L ++ N I
Sbjct: 402 -NDIGDEGAEKIADSLKQNRTIKTLDLGGNNIHGEGISKVAQALKDNDTITTLEISYNPI 460

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +GA  L + L    ++  L LG C +   GA  IA+ L  NTT+  ++L  N +  +G
Sbjct: 461 GPEGAEALSEVLKFHGNVKNLKLGWCKIGPKGAEFIAETLKYNTTISVLDLRGNGLRDEG 520

Query: 422 GLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKSFG 461
              L +++K   + L  +++  N+  + G   + + +K+ G
Sbjct: 521 ATCLARSLKVVNEALTSLDLGFNEIRDPGAFAIAQALKANG 561



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 97/452 (21%), Positives = 191/452 (42%), Gaps = 39/452 (8%)

Query: 7   KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           K+L+T   V+M        G+  L+++   N+ +  +N + N IT +G       L    
Sbjct: 167 KELRTFRSVDMTARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNI 226

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            L  L+L    +   G  ++   L +N+++E + L   ++  +G   + + +KN + L+ 
Sbjct: 227 ILKTLDLSGNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRI 286

Query: 127 INVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           I ++ N     G               +L LE++                N   A G N+
Sbjct: 287 IELNNNMIDYSGF-------------TSLXLENN-------TIRNIHLTGNYGGALGANA 326

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLA 246
                + N S    + + N+       +  S +S + G +L  LD+ +N+    G   +A
Sbjct: 327 LAKGLEGNKSLRELHLNGNSIGDEGVRTLISGLSSRKG-KLALLDIGNNSITAKGAFHVA 385

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
           + ++ +    L  L +N+  +G  G + ++ +L               +K    G N + 
Sbjct: 386 EFVKRTKSLVLLNLYMND--IGDEGAEKIADSLKQNR----------TIKTLDLGGNNIH 433

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
            EG   +A   K   T+  +E+  N I   G  ALS+  + + N+++L L    I  KGA
Sbjct: 434 GEGISKVAQALKDNDTITTLEISYNPIGPEGAEALSEVLKFHGNVKNLKLGWCKIGPKGA 493

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDL 425
             + + L    ++++L+L    L+  GA+ +A+ L   N  L  ++L  NEI   G   +
Sbjct: 494 EFIAETLKYNTTISVLDLRGNGLRDEGATCLARSLKVVNEALTSLDLGFNEIRDPGAFAI 553

Query: 426 VKAMK--NKTKLKQINVSEN---QFGEEGVEE 452
            +A+K      +  +N++ N   +FG+  + +
Sbjct: 554 AQALKANGDIAVTSLNLANNFLTKFGQSALTD 585



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 79/150 (52%), Gaps = 1/150 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ +T++ +++  N I+  GI+ ++ A ++N  +  L ++ N I  +GA  L + 
Sbjct: 412 IADSLKQNRTIKTLDLGGNNIHGEGISKVAQALKDNDTITTLEISYNPIGPEGAEALSEV 471

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L LG C +   GA  IA+ L  NTT+  ++L  N +  +G   L +++K  
Sbjct: 472 LKFHGNVKNLKLGWCKIGPKGAEFIAETLKYNTTISVLDLRGNGLRDEGATCLARSLKVV 531

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKSFG 150
            + L  +++  N+  + G   + + +K+ G
Sbjct: 532 NEALTSLDLGFNEIRDPGAFAIAQALKANG 561



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 61/136 (44%)

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
           K+L+T   V+M        G+  L+++   N+ +  +N + N IT +G       L    
Sbjct: 167 KELRTFRSVDMTARNFGDEGLFFLAESLGYNQTVEEVNFSANGITAEGIKAFDGVLQSNI 226

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
            L  L+L    +   G  ++   L +N+++E + L   ++  +G   + + +KN + L+ 
Sbjct: 227 ILKTLDLSGNPIGDDGVKTLCDLLVNNSSIETLRLNSTDVGDEGAKAVSEMLKNNSSLRI 286

Query: 438 INVSENQFGEEGVEEM 453
           I ++ N     G   +
Sbjct: 287 IELNNNMIDYSGFTSL 302


>gi|198432566|ref|XP_002119235.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 535

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 21/248 (8%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           +SL +  R+++LDLSDN     G   +A++L+ +C  +  EL L++N LG  G   L + 
Sbjct: 157 VSLVSNTRILKLDLSDNWLNAQGGVAIAEMLKENCYIS--ELILSDNHLGFGGAAALCET 214

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L +    +          V ++G N  ++  A  ++ +    + LE++++  N     G 
Sbjct: 215 LQENVTITH---------VTLSG-NDFDDGTAVPISEIIMSTQKLEQLDLSCNLFGEAGG 264

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             L  A  EN +++ LNL+ N     GA+ L + +     L  ++L    L   GAS++ 
Sbjct: 265 ELLGPAISENTSIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLSWNGLGLEGASALG 324

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             L +N  LE+++++ N IS +G + L K + +   L+ + + +N     G         
Sbjct: 325 DALRNNNVLEELDVSNNRISTEGAILLAKGLLSNETLRILRIGKNPIQSAG--------- 375

Query: 459 SFGMAAAL 466
            FG+  AL
Sbjct: 376 GFGILTAL 383



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 10/192 (5%)

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
           ++L + ++GLG  G K ++ +L           +   LK+ ++  N L  +G   +A + 
Sbjct: 138 QDLIMRHHGLGPAGAKAIAVSLV---------SNTRILKLDLSD-NWLNAQGGVAIAEML 187

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
           K+   +  + +  N +   G  AL +  +EN  + H+ L+ N      A+P+ + +    
Sbjct: 188 KENCYISELILSDNHLGFGGAAALCETLQENVTITHVTLSGNDFDDGTAVPISEIIMSTQ 247

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
            L  L+L   L   AG   +   +++NT+++D+NL+ N     G + L K +     LK+
Sbjct: 248 KLEQLDLSCNLFGEAGGELLGPAISENTSIKDLNLSWNHFRRNGAVSLAKGVGANIFLKK 307

Query: 438 INVSENQFGEEG 449
           I++S N  G EG
Sbjct: 308 IDLSWNGLGLEG 319



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  AL +  +EN  + H+ L+ N      A+P+ + +     L  L+L   L   AG   
Sbjct: 207 GAAALCETLQENVTITHVTLSGNDFDDGTAVPISEIIMSTQKLEQLDLSCNLFGEAGGEL 266

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           +   +++NT+++D+NL+ N     G + L K +     LK+I++S N  G EG
Sbjct: 267 LGPAISENTSIKDLNLSWNHFRRNGAVSLAKGVGANIFLKKIDLSWNGLGLEG 319



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 67/298 (22%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           M  +G+   G  A++ +   N ++  L+L+DN +  +G + + + L +   ++ L L D 
Sbjct: 142 MRHHGLGPAGAKAIAVSLVSNTRILKLDLSDNWLNAQGGVAIAEMLKENCYISELILSDN 201

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
            L   GA+++ + L +N T+  V L+ N+      + + + + +  KL+Q+++S N FGE
Sbjct: 202 HLGFGGAAALCETLQENVTITHVTLSGNDFDDGTAVPISEIIMSTQKLEQLDLSCNLFGE 261

Query: 137 EGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHS 196
            G E +       G A +                                N S  D N S
Sbjct: 262 AGGELL-------GPAIS-------------------------------ENTSIKDLNLS 283

Query: 197 HNASNQSHNNSNQSHNTSNQSHMSLKTGA----RLVELDLSDNAFGPIGVEGLADLLRSS 252
            N     H   N +        +SL  G      L ++DLS N  G  G   L D LR++
Sbjct: 284 WN-----HFRRNGA--------VSLAKGVGANIFLKKIDLSWNGLGLEGASALGDALRNN 330

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
               LEEL ++NN +   G  LL+K L           S   L++   G+N +++ G 
Sbjct: 331 NV--LEELDVSNNRISTEGAILLAKGLL----------SNETLRILRIGKNPIQSAGG 376



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 65/128 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+ HV +  N         +S+     +KL  L+L+ N     G   LG A+S+  S+  
Sbjct: 220 TITHVTLSGNDFDDGTAVPISEIIMSTQKLEQLDLSCNLFGEAGGELLGPAISENTSIKD 279

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL     +  GA S+AK +  N  L+ ++L+ N + ++G   L  A++N   L++++VS
Sbjct: 280 LNLSWNHFRRNGAVSLAKGVGANIFLKKIDLSWNGLGLEGASALGDALRNNNVLEELDVS 339

Query: 131 ENQFGEEG 138
            N+   EG
Sbjct: 340 NNRISTEG 347



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 9/154 (5%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ +    + LE +++  N     G   L  A  EN  ++ LNL+ N     GA+ L + 
Sbjct: 239 ISEIIMSTQKLEQLDLSCNLFGEAGGELLGPAISENTSIKDLNLSWNHFRRNGAVSLAKG 298

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +     L  ++L    L   GAS++   L +N  LE+++++ N IS +G + L K + + 
Sbjct: 299 VGANIFLKKIDLSWNGLGLEGASALGDALRNNNVLEELDVSNNRISTEGAILLAKGLLSN 358

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
             L+ + + +N     G          FG+  AL
Sbjct: 359 ETLRILRIGKNPIQSAG---------GFGILTAL 383



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +++  N +   G  A+++  +EN  +  L L+DN + + GA  L + L +  ++  + L 
Sbjct: 168 LDLSDNWLNAQGGVAIAEMLKENCYISELILSDNHLGFGGAAALCETLQENVTITHVTLS 227

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
                   A  I++ +     LE ++L+CN     GG  L  A+   T +K +N+S N F
Sbjct: 228 GNDFDDGTAVPISEIIMSTQKLEQLDLSCNLFGEAGGELLGPAISENTSIKDLNLSWNHF 287

Query: 135 GEEGVEEMEK 144
              G   + K
Sbjct: 288 RRNGAVSLAK 297



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  NG+   G +AL DA   N  L  L++++N I+ +GAI L + L    +L IL
Sbjct: 305 LKKIDLSWNGLGLEGASALGDALRNNNVLEELDVSNNRISTEGAILLAKGLLSNETLRIL 364

Query: 72  NLGDCLLKSAGASSIAKYLTDN 93
            +G   ++SAG   I   L  N
Sbjct: 365 RIGKNPIQSAGGFGILTALRQN 386


>gi|432945011|ref|XP_004083482.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Oryzias latipes]
          Length = 433

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 161/363 (44%), Gaps = 35/363 (9%)

Query: 105 EISVQG----GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
           ++SV G     + L K ++   +L   NV++ Q   + V   EK +K   ++  LV    
Sbjct: 84  DVSVHGHSWKRMFLEKHLEKIIELFIPNVTDPQTVLDVVSVCEKYVKRLDISQLLVP--- 140

Query: 161 EGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS 220
                 E Q +  E ++D   +     + H D     N   Q   N  + H         
Sbjct: 141 ----VVEPQKKSKENDHDFHWKRYVPPMDHFD----FNILLQRLTNLEELHLVYRIKQCG 192

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           +     + E+   D        E LA  L+S  C  L+  +L+ + +    C+LL K L 
Sbjct: 193 MNFAWNMFEMTYRD-------CETLAKALQS--CKTLKLFRLHQSHMDDRKCQLLVKHLM 243

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D          P +L+      N++ + GA+ ++ +  + K L+ + +  N I   G  A
Sbjct: 244 D---------HP-SLEELDFCHNKIGDVGARAISKLLTRNK-LQTLNLCNNLISCQGAKA 292

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           ++ A  +N  L  LNL  N I  +G   + +AL    +L  LNLG   L S  A +++K 
Sbjct: 293 IALALSKNCTLESLNLLLNMIKDEGGQAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKV 352

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           LT+NTTL+ +NL+CN++   GG  LV A+   + +K+ +V   Q  ++    + KL+ + 
Sbjct: 353 LTENTTLQSLNLSCNQLCEVGGEALVAALSQNSTIKECDVHLTQVDDQRSFLINKLLWAN 412

Query: 461 GMA 463
            M+
Sbjct: 413 QMS 415



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 29/170 (17%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK---LPS 67
           +LE ++   N I  VG  A+S     NK L+ LNL +N I+ +GA  +  ALSK   L S
Sbjct: 247 SLEELDFCHNKIGDVGARAISKLLTRNK-LQTLNLCNNLISCQGAKAIALALSKNCTLES 305

Query: 68  LAIL-------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L +L                         NLG   L S  A +++K LT+NTTL+ +NL+
Sbjct: 306 LNLLLNMIKDEGGQAIAEALLNNTTLHNLNLGGNYLTSVTAEAVSKVLTENTTLQSLNLS 365

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           CN++   GG  LV A+   + +K+ +V   Q  ++    + KL+ +  M+
Sbjct: 366 CNQLCEVGGEALVAALSQNSTIKECDVHLTQVDDQRSFLINKLLWANQMS 415


>gi|217074422|gb|ACJ85571.1| unknown [Medicago truncatula]
          Length = 533

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 13/239 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA L  L+LS+NA G  GV     LL+S     LEEL L N+G+     +  +KA+ +  
Sbjct: 213 GAVLRHLNLSNNAMGEKGVRAFRALLKSQN--DLEELYLMNDGI----SEEAAKAVAELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
             ++K      LKV     N   +EGA  +A V K+   LE        +   G  AL++
Sbjct: 267 PFTEK------LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A     +L+ L+L DN    +  + L + +     L  + L    L+  GA ++A  L +
Sbjct: 321 ALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKE 380

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           +  +LE +++  N+I+ +  + + + + +K  L ++N+SEN+  +EG   + K ++  G
Sbjct: 381 SAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGLG 439



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 4/156 (2%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL++A +E+   L  L++  N IT K A+ + + +S    L  LNL +  LK  GA 
Sbjct: 370 GAEALANALKESAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAG 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            I+K L     L +V+L+ N I+  G   L +A+  K   K +NV+ N   +EG++E++ 
Sbjct: 430 LISKALEGLGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNVNANFISDEGIDELKD 489

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           + K+   +  ++   DE +   E+ DEE+EE +D+D
Sbjct: 490 IFKN---SPDILGPLDENDPEGEDIDEEAEENSDND 522



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 5/159 (3%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L H+ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +
Sbjct: 215 VLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPFTEKLKV 274

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA  +  +  LED   +   +  +GG+ L +A+   T LK++++ 
Sbjct: 275 LHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLR 334

Query: 131 ENQFGEEGVEEMEKLMKSFG-----MAAALVLEDDEGEC 164
           +N FG E    + K++  F        + L LEDD  E 
Sbjct: 335 DNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEA 373



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           FIAGR   E E  +++      L+   L  + +  N +   G+ A     +   +L  L 
Sbjct: 191 FIAGRP--EAEAIEVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELY 248

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L ++ I+ + A  + + +     L +L+  + +    GA +IA  +  +  LED   +  
Sbjct: 249 LMNDGISEEAAKAVAELIPFTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSST 308

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG-----MAAALVLED 470
            +  +GG+ L +A+   T LK++++ +N FG E    + K++  F        + L LED
Sbjct: 309 RVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLED 368

Query: 471 D 471
           D
Sbjct: 369 D 369



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 66/144 (45%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+ K    LE + +  +GI      A+++     +KL+ L+ ++N    +GA  +   + 
Sbjct: 236 ALLKSQNDLEELYLMNDGISEEAAKAVAELIPFTEKLKVLHFHNNMTGDEGAFAIADVMK 295

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           + P+L         + + G  ++A+ L   T L+ ++L  N   V+ G+ L K +     
Sbjct: 296 RSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFAD 355

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L +I +S     ++G E +   +K
Sbjct: 356 LTEIYLSYLNLEDDGAEALANALK 379


>gi|71416645|ref|XP_810328.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70874842|gb|EAN88477.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 815

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 18/214 (8%)

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           S   ++  L L  N  G+ G + L +A+         E +P  L+    GRN+L+++ A 
Sbjct: 180 STAHSIRVLNLEGNAFGMAGLQALLEAV---------EKNPGILRELRLGRNKLKDQAAV 230

Query: 312 MLAAVFKK----LKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGA 366
           ++     +    LK L+   + +N I  +G+  ++ A  +   ++  L+ ++N I    A
Sbjct: 231 VIGHALSRDGCGLKVLD---LSENDITKLGVIPIAAAIGDGSCDVVELSFHNNKIEADAA 287

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             LGQA+     L  L+LG   ++ AGA+ +A+ +    +L  ++LT N I   GG +L 
Sbjct: 288 TYLGQAIRHAGKLRHLHLGYNAIRDAGAAQLAQCIPVTVSLSTLDLTANRIGPSGGKELA 347

Query: 427 KA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +A M N   ++++N+  N F  E +E   +++K+
Sbjct: 348 RALMTNSCNIQRLNLRHNLFDSETIEMYAEVIKT 381



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 2/139 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ +++ +N I  +G+  ++ A  +    +  L+ ++N I    A  LGQA+     L  
Sbjct: 243 LKVLDLSENDITKLGVIPIAAAIGDGSCDVVELSFHNNKIEADAATYLGQAIRHAGKLRH 302

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA-MKNKTKLKQINV 129
           L+LG   ++ AGA+ +A+ +    +L  ++LT N I   GG +L +A M N   ++++N+
Sbjct: 303 LHLGYNAIRDAGAAQLAQCIPVTVSLSTLDLTANRIGPSGGKELARALMTNSCNIQRLNL 362

Query: 130 SENQFGEEGVEEMEKLMKS 148
             N F  E +E   +++K+
Sbjct: 363 RHNLFDSETIEMYAEVIKT 381


>gi|363739684|ref|XP_003642205.1| PREDICTED: LOW QUALITY PROTEIN: protein NLRC3 [Gallus gallus]
          Length = 1097

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 38/266 (14%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF------------------------ 255
           SL     L  LDL  N+ GP G + LAD L+ +                           
Sbjct: 721 SLMVNRSLTVLDLRSNSIGPSGAKALADALKKNQVLLFLSLQHNVIKEEGAAALAEALLT 780

Query: 256 --ALEELKLNNNGLGITGCKLLSKAL-HDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
              L  L L  N +G  G + L++AL  +C           +LK  +   N + + G+  
Sbjct: 781 NRRLITLHLQKNSIGAHGARKLAEALAQNC-----------SLKELMLSSNSVGDNGSVA 829

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           LA   K   +L+ +++  N I + G++AL+ A   NK L  LNL +N+I+ +G   +  A
Sbjct: 830 LAEALKVNHSLQSLDLQSNSISNTGVSALTAALCSNKGLTDLNLRENSISKEGGPAIAHA 889

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L    +L  L+L   LL   G  +IA  + +N  L  ++L  N I  Q  + L +A+++ 
Sbjct: 890 LRTNCTLRKLDLAANLLHDEGGKAIALAMKENRALTSLHLQWNFIQTQAAVALAQALQSN 949

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMK 458
             L  +++ EN  G+EG+  +   +K
Sbjct: 950 DSLASLDLQENAIGDEGMAALAAALK 975



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 24/250 (9%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            +L     L EL LS N+ G  G   LA+ L+ +   +L+ L L +N +  TG   L+ AL
Sbjct: 805  ALAQNCSLKELMLSSNSVGDNGSVALAEALKVN--HSLQSLDLQSNSISNTGVSALTAAL 862

Query: 280  HDCYE-----------SSKKEGSP---------LALKVFIAGRNRLENEGAKMLAAVFKK 319
              C             S  KEG P           L+      N L +EG K +A   K+
Sbjct: 863  --CSNKGLTDLNLRENSISKEGGPAIAHALRTNCTLRKLDLAANLLHDEGGKAIALAMKE 920

Query: 320  LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             + L  + +  N I      AL+ A + N +L  L+L +N I  +G   L  AL    +L
Sbjct: 921  NRALTSLHLQWNFIQTQAAVALAQALQSNDSLASLDLQENAIGDEGMAALAAALKVNTTL 980

Query: 380  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            A L+L    + +AGA ++A+ L  N +L+ ++L  N ISV G   +  A+K    L+ +N
Sbjct: 981  ADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVAGAKAMANALKVNRSLRWLN 1040

Query: 440  VSENQFGEEG 449
            + EN  G +G
Sbjct: 1041 LQENSLGMDG 1050



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 24/321 (7%)

Query: 7    KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
            ++L TL    + +N I   G   L++A  +N  L+ L L+ N++   G++ L +AL    
Sbjct: 782  RRLITLH---LQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNH 838

Query: 67   SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            SL  L+L    + + G S++   L  N  L D+NL  N IS +GG  +  A++    L++
Sbjct: 839  SLQSLDLQSNSISNTGVSALTAALCSNKGLTDLNLRENSISKEGGPAIAHALRTNCTLRK 898

Query: 127  INVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
            ++++ N   +EG + +   MK      +L L+ +  +        ++ + NDS A  D  
Sbjct: 899  LDLAANLLHDEGGKAIALAMKENRALTSLHLQWNFIQTQAAVALAQALQSNDSLASLDLQ 958

Query: 187  NLSHNDSNHSHNASNQSHNNS---------NQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
              +  D   +  A+    N +         + S   +     +L     L  LDL  N+ 
Sbjct: 959  ENAIGDEGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSI 1018

Query: 238  GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
               G + +A+ L+ +   +L  L L  N LG+ G   ++ AL          G+     V
Sbjct: 1019 SVAGAKAMANALKVN--RSLRWLNLQENSLGMDGAICIATAL---------RGNHGLTYV 1067

Query: 298  FIAGRNRLENEGAKMLAAVFK 318
             + G NR+   GAKM++   +
Sbjct: 1068 NLQG-NRIGQSGAKMISDAIR 1087



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K   +L+ +++  N I + G++AL+ A   NK L  LNL +N+I+ +G   +  A
Sbjct: 830 LAEALKVNHSLQSLDLQSNSISNTGVSALTAALCSNKGLTDLNLRENSISKEGGPAIAHA 889

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   G  +IA  + +N  L  ++L  N I  Q  + L +A+++ 
Sbjct: 890 LRTNCTLRKLDLAANLLHDEGGKAIALAMKENRALTSLHLQWNFIQTQAAVALAQALQSN 949

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L  +++ EN  G+EG+  +   +K
Sbjct: 950 DSLASLDLQENAIGDEGMAALAAALK 975



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 179/421 (42%), Gaps = 59/421 (14%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
            ++L  +++  N I   G  AL+DA ++N+ L  L+L  N I  +GA  L +AL     L 
Sbjct: 726  RSLTVLDLRSNSIGPSGAKALADALKKNQVLLFLSLQHNVIKEEGAAALAEALLTNRRLI 785

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
             L+L    + + GA  +A+ L  N +L+++ L+ N +   G + L +A+K    L+ +++
Sbjct: 786  TLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEALKVNHSLQSLDL 845

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
              N     GV           + AAL        CS++   + +  EN    EG  + ++
Sbjct: 846  QSNSISNTGVS---------ALTAAL--------CSNKGLTDLNLRENSISKEGGPA-IA 887

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
            H                             +L+T   L +LDL+ N     G + +A  +
Sbjct: 888  H-----------------------------ALRTNCTLRKLDLAANLLHDEGGKAIALAM 918

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            + +   AL  L L  N +       L++A       S    + L L+      N + +EG
Sbjct: 919  KEN--RALTSLHLQWNFIQTQAAVALAQA-----LQSNDSLASLDLQ-----ENAIGDEG 966

Query: 310  AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
               LAA  K   TL  + +    I   G  AL++A   N +L+ L+L  N+I+  GA  +
Sbjct: 967  MAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVAGAKAM 1026

Query: 370  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
              AL    SL  LNL +  L   GA  IA  L  N  L  VNL  N I   G   +  A+
Sbjct: 1027 ANALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQGNRIGQSGAKMISDAI 1086

Query: 430  K 430
            +
Sbjct: 1087 R 1087



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 183/407 (44%), Gaps = 33/407 (8%)

Query: 53   KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 112
            +GA  L ++L    SL +L+L    +  +GA ++A  L  N  L  ++L  N I  +G  
Sbjct: 715  RGA--LARSLMVNRSLTVLDLRSNSIGPSGAKALADALKKNQVLLFLSLQHNVIKEEGAA 772

Query: 113  DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
             L +A+    +L  +++ +N  G  G  ++ + +                 CS +E    
Sbjct: 773  ALAEALLTNRRLITLHLQKNSIGAHGARKLAEALAQ--------------NCSLKELMLS 818

Query: 173  SEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDL 232
            S    D+ +      L  N S  S +  + S +N+  S  T+     +L +   L +L+L
Sbjct: 819  SNSVGDNGSVALAEALKVNHSLQSLDLQSNSISNTGVSALTA-----ALCSNKGLTDLNL 873

Query: 233  SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
             +N+    G   +A  LR++C   L +L L  N L   G K ++ A+        KE   
Sbjct: 874  RENSISKEGGPAIAHALRTNC--TLRKLDLAANLLHDEGGKAIALAM--------KENR- 922

Query: 293  LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
             AL       N ++ + A  LA   +   +L  +++ +N I   G+ AL+ A + N  L 
Sbjct: 923  -ALTSLHLQWNFIQTQAAVALAQALQSNDSLASLDLQENAIGDEGMAALAAALKVNTTLA 981

Query: 353  HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
             L+L   +I+  GA  L +AL    SL +L+L    +  AGA ++A  L  N +L  +NL
Sbjct: 982  DLHLQVASISAAGAQALAEALMVNNSLQVLDLRGNSISVAGAKAMANALKVNRSLRWLNL 1041

Query: 413  TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
              N + + G + +  A++    L  +N+  N+ G+ G + +   +++
Sbjct: 1042 QENSLGMDGAICIATALRGNHGLTYVNLQGNRIGQSGAKMISDAIRT 1088



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 162/393 (41%), Gaps = 48/393 (12%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   KK + L  + +  N I   G  AL++A   N++L  L+L  N+I   GA  L +A
Sbjct: 746  LADALKKNQVLLFLSLQHNVIKEEGAAALAEALLTNRRLITLHLQKNSIGAHGARKLAEA 805

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L++  SL  L L    +   G+ ++A+ L  N +L+ ++L  N IS  G   L  A+ + 
Sbjct: 806  LAQNCSLKELMLSSNSVGDNGSVALAEALKVNHSLQSLDLQSNSISNTGVSALTAALCSN 865

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L  +N+ EN   +EG           G A A  L  +   C+  + D  +   +D   
Sbjct: 866  KGLTDLNLRENSISKEG-----------GPAIAHALRTN---CTLRKLDLAANLLHDEGG 911

Query: 182  EGDNSNLSHNDSNHS----HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
            +     +  N +  S     N        +      SN S         L  LDL +NA 
Sbjct: 912  KAIALAMKENRALTSLHLQWNFIQTQAAVALAQALQSNDS---------LASLDLQENAI 962

Query: 238  GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
            G  G+  LA  L+ +   A   L++ +           +  +++            +L+V
Sbjct: 963  GDEGMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNN------------SLQV 1010

Query: 298  FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
                 N +   GAK +A   K  ++L  + + +N +   G   ++ A   N  L ++NL 
Sbjct: 1011 LDLRGNSISVAGAKAMANALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQ 1070

Query: 358  DNTITYKGAIPLGQALSKLPSLAI-LNLGDCLL 389
             N I        GQ+ +K+ S AI  N  DC++
Sbjct: 1071 GNRI--------GQSGAKMISDAIRTNSPDCVV 1095



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 62/122 (50%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G  AL+ +   N++L  L+L  N+I   GA  L  AL K   L  L+L   ++K  GA++
Sbjct: 714 GRGALARSLMVNRSLTVLDLRSNSIGPSGAKALADALKKNQVLLFLSLQHNVIKEEGAAA 773

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           +A+ L  N  L  ++L  N I   G   L +A+     LK++ +S N  G+ G   + + 
Sbjct: 774 LAEALLTNRRLITLHLQKNSIGAHGARKLAEALAQNCSLKELMLSSNSVGDNGSVALAEA 833

Query: 457 MK 458
           +K
Sbjct: 834 LK 835


>gi|358333002|dbj|GAA29628.2| T-complex-associated testis-expressed protein 1 [Clonorchis
           sinensis]
          Length = 526

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 1/174 (0%)

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           DC    K      ++KV    R+R+++E  ++L +   +  TLE +++  N I   G  A
Sbjct: 266 DCLSLCKALQQHPSIKVLHLTRSRVDSERCRVLTSHLVRHPTLECLDLAHNFIGDRGARA 325

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAK 399
           LS        ++ LNL DN +   G + L  AL+K   SL  LNL    LK  G  +IAK
Sbjct: 326 LSKLICGQSKIQTLNLADNRLQASGGLSLAHALAKKSCSLVRLNLRLNRLKDDGGIAIAK 385

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            L  NTTL ++NL  N++    G      +   T L  +++S NQ G E  + +
Sbjct: 386 SLLRNTTLRELNLAANDLEESTGDHFAHVIGYNTALTHLDLSNNQMGPEASQRL 439



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 1/143 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L +   +  TLE +++  N I   G  ALS       K++ LNL DN +   G + L  
Sbjct: 297 VLTSHLVRHPTLECLDLAHNFIGDRGARALSKLICGQSKIQTLNLADNRLQASGGLSLAH 356

Query: 61  ALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           AL+K   SL  LNL    LK  G  +IAK L  NTTL ++NL  N++    G      + 
Sbjct: 357 ALAKKSCSLVRLNLRLNRLKDDGGIAIAKSLLRNTTLRELNLAANDLEESTGDHFAHVIG 416

Query: 120 NKTKLKQINVSENQFGEEGVEEM 142
             T L  +++S NQ G E  + +
Sbjct: 417 YNTALTHLDLSNNQMGPEASQRL 439



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           +L  A +++  ++ L+L  + +  +    L   L + P+L  L+L    +   GA +++K
Sbjct: 269 SLCKALQQHPSIKVLHLTRSRVDSERCRVLTSHLVRHPTLECLDLAHNFIGDRGARALSK 328

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEG 138
            +   + ++ +NL  N +   GGL L  A+  K+  L ++N+  N+  ++G
Sbjct: 329 LICGQSKIQTLNLADNRLQASGGLSLAHALAKKSCSLVRLNLRLNRLKDDG 379


>gi|224100227|ref|XP_002311795.1| predicted protein [Populus trichocarpa]
 gi|222851615|gb|EEE89162.1| predicted protein [Populus trichocarpa]
          Length = 490

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 181/406 (44%), Gaps = 21/406 (5%)

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           +L +   +++  C     G   +A+ L  N  LE+V+   N I+ +G     + +++   
Sbjct: 53  QLRAFRSVDMSGCNFGDEGLFFLAESLAYNQILEEVSFAANGITAEGTKAFDRVLQSNIS 112

Query: 124 LKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEG-ECSDEEQDEESEEENDSDA 181
           LK +N+S N  G+EG + + E L+ + G+    +   D G E +    D   +       
Sbjct: 113 LKTLNISGNPIGDEGAKILCEILVDNVGIEKLQLNSADLGDEGAKAIADLLKKSSTLRVV 172

Query: 182 EGDNSNLSHNDSNH------SHNASNQSHNNSNQSHNT-SNQSHMSLKTGARLVELDLSD 234
           E +N+ + ++           +NA    + N N      +N     L+    L EL L  
Sbjct: 173 ELNNNMIDYSGFTSLAGALLENNAVRSIYLNGNYGGALGANALAKGLEGNKSLRELHLQG 232

Query: 235 NAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLA 294
           N+ G  GV  L   L SS    L  L + NN +   G      A H   E  KK  S   
Sbjct: 233 NSIGDEGVRALMSGL-SSTKAKLTHLDIGNNSISAKG------AFH-VAEYVKKSKSLFW 284

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L +++   N + +EGA+ +A   K+ +++  +++  N I+  GI+ ++   ++N  +  L
Sbjct: 285 LNMYM---NDIGDEGAEKIADALKQNRSIAIIDLGGNNIHAKGISEIAQVLKDNTVITTL 341

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            +  N     G   L + L    ++  L LG C + + G+  IA  L  N T+  ++L  
Sbjct: 342 EIGYNPFGPDGMKVLSEILKFHGNVKALKLGWCQIGAKGSEYIADTLKYNNTISILDLRG 401

Query: 415 NEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 459
           N +  +G + L +++K   + L ++++  N+  ++G   + + +KS
Sbjct: 402 NGLRDEGAVCLARSLKVVNEVLTELDLGFNEIRDDGAFAIAQALKS 447



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 35/276 (12%)

Query: 216 QSHMSLKT-----------GARLV-----------ELDLSDNAFGPIGVEGLADLLRSSC 253
           QS++SLKT           GA+++           +L L+    G  G + +ADLL+ S 
Sbjct: 108 QSNISLKTLNISGNPIGDEGAKILCEILVDNVGIEKLQLNSADLGDEGAKAIADLLKKSS 167

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              L  ++LNNN +  +G   L+ AL +         +     +++ G N     GA  L
Sbjct: 168 T--LRVVELNNNMIDYSGFTSLAGALLE---------NNAVRSIYLNG-NYGGALGANAL 215

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQA 372
           A   +  K+L  + +  N I   G+ AL       K  L HL++ +N+I+ KGA  + + 
Sbjct: 216 AKGLEGNKSLRELHLQGNSIGDEGVRALMSGLSSTKAKLTHLDIGNNSISAKGAFHVAEY 275

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           + K  SL  LN+    +   GA  IA  L  N ++  ++L  N I  +G  ++ + +K+ 
Sbjct: 276 VKKSKSLFWLNMYMNDIGDEGAEKIADALKQNRSIAIIDLGGNNIHAKGISEIAQVLKDN 335

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
           T +  + +  N FG +G++ + +++K  G   AL L
Sbjct: 336 TVITTLEIGYNPFGPDGMKVLSEILKFHGNVKALKL 371



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 29/286 (10%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K+L  + +  N I   G+ AL       K KL HL++ +N+I+ KGA  + + + K  SL
Sbjct: 223 KSLRELHLQGNSIGDEGVRALMSGLSSTKAKLTHLDIGNNSISAKGAFHVAEYVKKSKSL 282

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             LN+    +   GA  IA  L  N ++  ++L  N I  +G  ++ + +K+ T +  + 
Sbjct: 283 FWLNMYMNDIGDEGAEKIADALKQNRSIAIIDLGGNNIHAKGISEIAQVLKDNTVITTLE 342

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           +  N FG +G++ + +++K  G   AL L    G C    Q      E  +D    N+ +
Sbjct: 343 IGYNPFGPDGMKVLSEILKFHGNVKALKL----GWC----QIGAKGSEYIADTLKYNNTI 394

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLV-----ELDLSDNAFGPIGVE 243
           S  D                + +   ++  + L    ++V     ELDL  N     G  
Sbjct: 395 SILDL---------------RGNGLRDEGAVCLARSLKVVNEVLTELDLGFNEIRDDGAF 439

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
            +A  L+S+    +  L L NN L   G   L+ A    YE ++KE
Sbjct: 440 AIAQALKSNEDVKITSLNLGNNFLTKFGQSALTDARDHVYEMNEKE 485



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 166/407 (40%), Gaps = 38/407 (9%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           + LE V    NGI   G  A     + N  L+ LN++ N I  +GA  L + L     + 
Sbjct: 83  QILEEVSFAANGITAEGTKAFDRVLQSNISLKTLNISGNPIGDEGAKILCEILVDNVGIE 142

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L    L   GA +IA  L  ++TL  V L  N I   G   L  A+     ++ I +
Sbjct: 143 KLQLNSADLGDEGAKAIADLLKKSSTLRVVELNNNMIDYSGFTSLAGALLENNAVRSIYL 202

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N  G  G   + K +              EG  S  E   +     D       S LS
Sbjct: 203 NGNYGGALGANALAKGL--------------EGNKSLRELHLQGNSIGDEGVRALMSGLS 248

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGVEGLAD 247
              +  +H       +  N S +     H++  +K    L  L++  N  G  G E +AD
Sbjct: 249 STKAKLTH------LDIGNNSISAKGAFHVAEYVKKSKSLFWLNMYMNDIGDEGAEKIAD 302

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
            L+ +   A+ +L  NN         + +K + +  +  K       L++   G N    
Sbjct: 303 ALKQNRSIAIIDLGGNN---------IHAKGISEIAQVLKDNTVITTLEI---GYNPFGP 350

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           +G K+L+ + K    ++ +++    I   G   ++D  + N  +  L+L  N +  +GA+
Sbjct: 351 DGMKVLSEILKFHGNVKALKLGWCQIGAKGSEYIADTLKYNNTISILDLRGNGLRDEGAV 410

Query: 368 PLGQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
            L ++L  +   L  L+LG   ++  GA +IA+ L  N   EDV +T
Sbjct: 411 CLARSLKVVNEVLTELDLGFNEIRDDGAFAIAQALKSN---EDVKIT 454



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + KK  TL  VE+  N I + G T+L+ A  EN  +R + LN N     GA  L + 
Sbjct: 159 IADLLKKSSTLRVVELNNNMIDYSGFTSLAGALLENNAVRSIYLNGNYGGALGANALAKG 218

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    SL  L+L    +   G  ++   L+     L  +++  N IS +G   + + +K 
Sbjct: 219 LEGNKSLRELHLQGNSIGDEGVRALMSGLSSTKAKLTHLDIGNNSISAKGAFHVAEYVKK 278

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
              L  +N+  N  G+EG E++   +K
Sbjct: 279 SKSLFWLNMYMNDIGDEGAEKIADALK 305



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 74/148 (50%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ +++  +++  N I+  GI+ ++   ++N  +  L +  N     G   L + 
Sbjct: 300 IADALKQNRSIAIIDLGGNNIHAKGISEIAQVLKDNTVITTLEIGYNPFGPDGMKVLSEI 359

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L LG C + + G+  IA  L  N T+  ++L  N +  +G + L +++K  
Sbjct: 360 LKFHGNVKALKLGWCQIGAKGSEYIADTLKYNNTISILDLRGNGLRDEGAVCLARSLKVV 419

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKS 148
            + L ++++  N+  ++G   + + +KS
Sbjct: 420 NEVLTELDLGFNEIRDDGAFAIAQALKS 447



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 64/150 (42%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           +++ E  + L    K+L+    V+M        G+  L+++   N+ L  ++   N IT 
Sbjct: 38  KVDRESKQKLNEFAKQLRAFRSVDMSGCNFGDEGLFFLAESLAYNQILEEVSFAANGITA 97

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
           +G     + L    SL  LN+    +   GA  + + L DN  +E + L   ++  +G  
Sbjct: 98  EGTKAFDRVLQSNISLKTLNISGNPIGDEGAKILCEILVDNVGIEKLQLNSADLGDEGAK 157

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            +   +K  + L+ + ++ N     G   +
Sbjct: 158 AIADLLKKSSTLRVVELNNNMIDYSGFTSL 187


>gi|156392781|ref|XP_001636226.1| predicted protein [Nematostella vectensis]
 gi|156223327|gb|EDO44163.1| predicted protein [Nematostella vectensis]
          Length = 271

 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 19/232 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN--GLGITGCKLLSK 277
           SLK  + L  +D+S N+ G  GV  +A           E LK+N     LGI G  +  +
Sbjct: 2   SLKNNSTLSTIDISVNSLGDAGVASIA-----------EALKVNTTVRKLGIKGRNMTPE 50

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           A     E  +   +   L +      ++ + GA  +A+   +  TLE++++  + I   G
Sbjct: 51  AGRALGEMLRHNTTITFLSLV---HGKIGDSGALCIASGLSQNTTLEKIQIENSCIGATG 107

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
           ++AL+   +   N  HL+L+ N I  KGA  + + +     L  L +  C +   G   I
Sbjct: 108 VSALAKVIQ---NATHLDLSKNIIGTKGAKAISKVIENSCKLKYLRIDHCNIDVLGVRDI 164

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           AK L+ NT LE++++ C  I  +G  +L +++     L+ + ++ N   E+G
Sbjct: 165 AKALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITHNNISEKG 216



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 12/161 (7%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE +++  + I   G++AL+   +      HL+L+ N I  KGA  + + +     L  
Sbjct: 92  TLEKIQIENSCIGATGVSALAKVIQN---ATHLDLSKNIIGTKGAKAISKVIENSCKLKY 148

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L +  C +   G   IAK L+ NT LE++++ C  I  +G  +L +++     L+ + ++
Sbjct: 149 LRIDHCNIDVLGVRDIAKALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTIT 208

Query: 131 ENQFGEEGVEEMEKL-------MKSFGMAAALVLEDDEGEC 164
            N   E+G   + +        ++   +A A +  DDEG C
Sbjct: 209 HNNISEKGKRAIIEASLSKNTNLEELSVACAGI--DDEGMC 247



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++  N +   G+ ++++A + N  +R L +    +T +    LG+ L    ++  
Sbjct: 8   TLSTIDISVNSLGDAGVASIAEALKVNTTVRKLGIKGRNMTPEAGRALGEMLRHNTTITF 67

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    +  +GA  IA  L+ NTTLE + +  + I   G   L K ++N T L   ++S
Sbjct: 68  LSLVHGKIGDSGALCIASGLSQNTTLEKIQIENSCIGATGVSALAKVIQNATHL---DLS 124

Query: 131 ENQFGEEGVEEMEKLM 146
           +N  G +G + + K++
Sbjct: 125 KNIIGTKGAKAISKVI 140



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 14/192 (7%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           LE++++ N+ +G TG   L+K + +         + L L      +N +  +GAK ++ V
Sbjct: 93  LEKIQIENSCIGATGVSALAKVIQN--------ATHLDLS-----KNIIGTKGAKAISKV 139

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            +    L+ + +    I  +G+  ++ A  +N NL  L++    I  +G   L ++++K 
Sbjct: 140 IENSCKLKYLRIDHCNIDVLGVRDIAKALSKNTNLEELSVACAGIDDEGMCELARSVAKN 199

Query: 377 PSLAILNLGDCLLKSAGASSIAKY-LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
            SL +L +    +   G  +I +  L+ NT LE++++ C  I  +G  +L +++     L
Sbjct: 200 KSLQVLTITHNNISEKGKRAIIEASLSKNTNLEELSVACAGIDDEGMCELARSVAKNKSL 259

Query: 436 KQINVSENQFGE 447
           + + ++ N   E
Sbjct: 260 QVLTITHNNISE 271


>gi|222635277|gb|EEE65409.1| hypothetical protein OsJ_20746 [Oryza sativa Japonica Group]
          Length = 873

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 178/399 (44%), Gaps = 51/399 (12%)

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EK 144
           +A+ L  N + E+V+ + N I+  G       ++  T LK +N+S N  G+EG + + + 
Sbjct: 188 LAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDI 247

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSH 204
           L+++ G+   L+                S    D  A+  +  L  N +  +     Q  
Sbjct: 248 LVENVGIQKLLL---------------NSTNIGDEGAKAISDMLKKNKTIRTL----QLS 288

Query: 205 NNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
           NN+ +    ++ +   L+    L  L ++ N  GP+G   LA  +  +    L EL L+ 
Sbjct: 289 NNTIEYSGFASIAEALLENNV-LRSLFVNGNYGGPLGASSLAKGILGNKT--LRELHLHG 345

Query: 265 NGLGITGCKLLSKALH----------------------DCYESSKKEGSPLALKVFIAGR 302
           NG G  G + L  AL                          E  K+  S L L +++   
Sbjct: 346 NGFGNEGVRALMSALSAHKGKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYM--- 402

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + +EGA+ +A   K+ KT+  V++  N I+  G++A+++  ++N  +  L L+ N I 
Sbjct: 403 NDISDEGAEKVADALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIG 462

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +G   L   L     +  L LG C +  +GA  +A  L  NTTL  ++L  N +   G 
Sbjct: 463 PEGVKALCDVLKFNGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDDGA 522

Query: 423 LDLVKAMK--NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L ++ K  N++ L  +++  N+  ++G   + + +K+
Sbjct: 523 ICLARSFKIINES-LTSLDLGFNEIRDDGAFALAQALKA 560



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 69/378 (18%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ + KK KT+  +++  N I + G  ++++A  EN  LR L +N N   Y G  PL   
Sbjct: 272 ISDMLKKNKTIRTLQLSNNTIEYSGFASIAEALLENNVLRSLFVNGN---YGG--PL--- 323

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-N 120
                               GASS+AK +  N TL +++L  N    +G   L+ A+  +
Sbjct: 324 --------------------GASSLAKGILGNKTLRELHLHGNGFGNEGVRALMSALSAH 363

Query: 121 KTKLKQINVSENQFGEEG---VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           K K+  +++  N    EG   V E  K  KS  +  +L + D   E +++  D   + + 
Sbjct: 364 KGKITVLDIGNNNITSEGSLHVAEFIKRTKSL-LWLSLYMNDISDEGAEKVADALKQNKT 422

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
            S  +   +N+      HS   S  +                +LK  + +  L+LS N  
Sbjct: 423 ISTVDLGGNNI------HSKGVSAIAE---------------TLKDNSVVTTLELSYNPI 461

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
           GP GV+ L D+L+ +    ++ LKL    +G++G + ++    DC + +    S L L+ 
Sbjct: 462 GPEGVKALCDVLKFNG--KIQTLKLGWCQIGVSGAEFVA----DCLKYNTTL-STLDLRA 514

Query: 298 FIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNL--RHL 354
                N L ++GA  LA  FK + ++L  +++  N I   G  AL+ A + N++L    L
Sbjct: 515 -----NGLGDDGAICLARSFKIINESLTSLDLGFNEIRDDGAFALAQALKANEDLAVTSL 569

Query: 355 NLNDNTITYKGAIPLGQA 372
           NL +N  T  G + L +A
Sbjct: 570 NLANNFFTKFGQVALSEA 587



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 38/350 (10%)

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           +L K  K    LK +N++  QFG+EG+         F +A +L                +
Sbjct: 159 NLNKFYKEIRTLKNVNMAGRQFGDEGL---------FFLAESLAY-------------NK 196

Query: 173 SEEENDSDAEGDNS-NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVE 229
           S EE D    G  +  +   D     N + +S N S  +        +S  L     + +
Sbjct: 197 SAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDILVENVGIQK 256

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L L+    G  G + ++D+L+ +    +  L+L+NN +  +G   +++AL +        
Sbjct: 257 LLLNSTNIGDEGAKAISDMLKKNKT--IRTLQLSNNTIEYSGFASIAEALLE-------- 306

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            + +   +F+ G N     GA  LA      KTL  + +  NG  + G+ AL  A   +K
Sbjct: 307 -NNVLRSLFVNG-NYGGPLGASSLAKGILGNKTLRELHLHGNGFGNEGVRALMSALSAHK 364

Query: 350 N-LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             +  L++ +N IT +G++ + + + +  SL  L+L    +   GA  +A  L  N T+ 
Sbjct: 365 GKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMNDISDEGAEKVADALKQNKTIS 424

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            V+L  N I  +G   + + +K+ + +  + +S N  G EGV+ +  ++K
Sbjct: 425 TVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKALCDVLK 474



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 80/208 (38%), Gaps = 36/208 (17%)

Query: 284 ESSKKEGSPLALKV-FIAGRN-------RLENEGAKMLAAVFKKLKTL------------ 323
           + S  E +P  +   F AG N         E E  K L   +K+++TL            
Sbjct: 123 DQSSGESTPSGIMWSFAAGSNLSTSASFNAEKESRKNLNKFYKEIRTLKNVNMAGRQFGD 182

Query: 324 ----------------ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
                           E V+   NGI  VGI A     + N  L+ LNL+ N I  +GA 
Sbjct: 183 EGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAK 242

Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
            L   L +   +  L L    +   GA +I+  L  N T+  + L+ N I   G   + +
Sbjct: 243 CLSDILVENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAE 302

Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEK 455
           A+     L+ + V+ N  G  G   + K
Sbjct: 303 ALLENNVLRSLFVNGNYGGPLGASSLAK 330


>gi|242095286|ref|XP_002438133.1| hypothetical protein SORBIDRAFT_10g008560 [Sorghum bicolor]
 gi|241916356|gb|EER89500.1| hypothetical protein SORBIDRAFT_10g008560 [Sorghum bicolor]
          Length = 614

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 45/396 (11%)

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EK 144
           +A+ L  N + E+V+ + N I+  G       ++  T LK +N+S N  G+EG + + + 
Sbjct: 199 LAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTTLKTLNLSGNDIGDEGAKCLSDI 258

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSH 204
           L+++FG+   L+   + G               D  A+  ++ L  N S      SN + 
Sbjct: 259 LVENFGIQKLLLNSINIG---------------DEGAKAISNMLKKNKSIRFLQLSNNTI 303

Query: 205 NNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
           + S  +         +L     +  L L+ N  GP+G   LA  +  +   +L E+ L+ 
Sbjct: 304 DYSGFASIAEGLLENNL-----IRSLYLNGNYGGPLGASSLAQGILGNK--SLREIHLHG 356

Query: 265 NGLGITGCKLLSKALH---------DCYESS-KKEG-SPLA--------LKVFIAGRNRL 305
           NG+G  G + L  AL          D   ++   EG  P+A        L+ F    N +
Sbjct: 357 NGIGNEGIRELMSALSAHKGKITIVDIGNNNISPEGLRPVASFLKRTKSLQWFSLCMNDI 416

Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
            +EGA+ +A   K  KT+  +++  N I+  G++ +++  ++N  L  L+L+ N I   G
Sbjct: 417 SDEGAEKVAEALKDNKTISTIDLGGNNIHSKGVSVIAETLKDNAVLTTLDLSYNPIGSDG 476

Query: 366 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 425
              L   L     +  L LG C +   GA  IA  L  NTTL  ++L  N +   G + L
Sbjct: 477 VKALCDVLKFHGKIQTLKLGWCQIGVEGAECIADCLKYNTTLSTLDLRANGLGDDGAICL 536

Query: 426 VKAMK--NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            ++ K  N++ L  +++  N+  ++G   + + +K+
Sbjct: 537 ARSFKIINES-LTSLDLGFNEIRDDGAFALAQALKA 571



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 170/375 (45%), Gaps = 63/375 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ + KK K++  +++  N I + G  ++++   EN  +R L LN N   Y G  PL   
Sbjct: 283 ISNMLKKNKSIRFLQLSNNTIDYSGFASIAEGLLENNLIRSLYLNGN---YGG--PL--- 334

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-N 120
                               GASS+A+ +  N +L +++L  N I  +G  +L+ A+  +
Sbjct: 335 --------------------GASSLAQGILGNKSLREIHLHGNGIGNEGIRELMSALSAH 374

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           K K+  +++  N    EG+  +   +K         L      C ++  DE +E+   ++
Sbjct: 375 KGKITIVDIGNNNISPEGLRPVASFLKRTKSLQWFSL------CMNDISDEGAEKV--AE 426

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
           A  DN  +S  D             N+  S   S  +  +LK  A L  LDLS N  G  
Sbjct: 427 ALKDNKTISTIDLG----------GNNIHSKGVSVIAE-TLKDNAVLTTLDLSYNPIGSD 475

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           GV+ L D+L+      ++ LKL    +G+ G + ++    DC + +    S L L+    
Sbjct: 476 GVKALCDVLKFHG--KIQTLKLGWCQIGVEGAECIA----DCLKYNTTL-STLDLRA--- 525

Query: 301 GRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNL--RHLNLN 357
             N L ++GA  LA  FK + ++L  +++  N I   G  AL+ A + N++L    LNL 
Sbjct: 526 --NGLGDDGAICLARSFKIINESLTSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLA 583

Query: 358 DNTITYKGAIPLGQA 372
           +N  T  G + L +A
Sbjct: 584 NNFFTKFGQVALSEA 598


>gi|388502958|gb|AFK39545.1| unknown [Medicago truncatula]
          Length = 484

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 13/239 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA L  L+LS+NA G  GV     LL+S     LEEL L N+G+     +  +KA+ +  
Sbjct: 213 GAVLRHLNLSNNAMGEKGVRAFRALLKSQN--DLEELYLMNDGI----SEEAAKAVAELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
             ++K      LKV     N   +EGA  +A V K+   LE        +   G  AL++
Sbjct: 267 PFTEK------LKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A     +L+ L+L DN    +  + L + +     L  + L    L+  GA ++A  L +
Sbjct: 321 ALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKE 380

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           +  +LE +++  N+I+ +  + + + + +K  L ++N+SEN+  +EG   + K ++  G
Sbjct: 381 SAPSLEILDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGLG 439



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 5/159 (3%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L H+ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +
Sbjct: 215 VLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPFTEKLKV 274

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA  +  +  LED   +   +  +GG+ L +A+   T LK++++ 
Sbjct: 275 LHFHNNMTGDEGAFAIADVMKRSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLR 334

Query: 131 ENQFGEEGVEEMEKLMKSFG-----MAAALVLEDDEGEC 164
           +N FG E    + K++  F        + L LEDD  E 
Sbjct: 335 DNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEA 373



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           FIAGR   E E  +++      L+   L  + +  N +   G+ A     +   +L  L 
Sbjct: 191 FIAGRP--EAEAIEVMNIFSSALEGAVLRHLNLSNNAMGEKGVRAFRALLKSQNDLEELY 248

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L ++ I+ + A  + + +     L +L+  + +    GA +IA  +  +  LED   +  
Sbjct: 249 LMNDGISEEAAKAVAELIPFTEKLKVLHFHNNMTGDEGAFAIADVMKRSPALEDFRCSST 308

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG-----MAAALVLED 470
            +  +GG+ L +A+   T LK++++ +N FG E    + K++  F        + L LED
Sbjct: 309 RVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLED 368

Query: 471 D 471
           D
Sbjct: 369 D 369



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 23/213 (10%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  L   +N  G  G   +AD+++ S   ALE+ + ++  +G  G   L++AL  C   
Sbjct: 271 KLKVLHFHNNMTGDEGAFAIADVMKRSP--ALEDFRCSSTRVGAEGGVALAEALGACTHL 328

Query: 286 SK----------KEGSPLA---------LKVFIAGRNRLENEGAKMLAAVFKK-LKTLER 325
            K          + G  L+          +++++  N LE++GA+ LA   K+   +LE 
Sbjct: 329 KKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLN-LEDDGAEALANALKESAPSLEI 387

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           ++M  N I      ++++     + L  LNL++N +  +GA  + +AL  L  L+ ++L 
Sbjct: 388 LDMAGNDITAKTAVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGLGQLSEVDLS 447

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
             L+  +GA  +A+ +      + +N+  N IS
Sbjct: 448 TNLITWSGAKLLAEAVVQKPGFKLLNVNANFIS 480



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/144 (22%), Positives = 66/144 (45%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+ K    LE + +  +GI      A+++     +KL+ L+ ++N    +GA  +   + 
Sbjct: 236 ALLKSQNDLEELYLMNDGISEEAAKAVAELIPFTEKLKVLHFHNNMTGDEGAFAIADVMK 295

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           + P+L         + + G  ++A+ L   T L+ ++L  N   V+ G+ L K +     
Sbjct: 296 RSPALEDFRCSSTRVGAEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFAD 355

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L +I +S     ++G E +   +K
Sbjct: 356 LTEIYLSYLNLEDDGAEALANALK 379


>gi|146092227|ref|XP_001470238.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|398018260|ref|XP_003862311.1| hypothetical protein, conserved [Leishmania donovani]
 gi|134085032|emb|CAM69433.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322500540|emb|CBZ35617.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 753

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 29/215 (13%)

Query: 253 CCFA-----------LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           CC A           L  L L  N  G+ G   L +A+         E +P  ++    G
Sbjct: 53  CCVAEVIRTLSDESQLRVLVLEENSFGLPGVTALMEAI---------EANPNHIRELRLG 103

Query: 302 RNRLENEGAKMLAAVFKK----LKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNL 356
           +N L+++ A ++     +    LK L+   + +N I  +G+  ++ A ++   ++  L+ 
Sbjct: 104 KNNLKDQAAVVIGHTLSRSGCGLKVLD---LSENNITKLGVIPIAAALQQPFCDIVELSF 160

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
           ++N I    A  LGQAL   P L  L+LG   L+  GA+ IA+ +     L  ++LT N 
Sbjct: 161 HNNKIGCDAASYLGQALRAAPKLKHLHLGYNALRDNGAAQIARSVPHAACLSTLDLTANR 220

Query: 417 ISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGV 450
           IS +GG +LV+A+   T  ++++N+  NQ   E +
Sbjct: 221 ISREGGEELVRALMTPTCTVQRLNLRHNQLDSETI 255



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ +++ +N I  +G+  ++ A ++    +  L+ ++N I    A  LGQAL   P L  
Sbjct: 126 LKVLDLSENNITKLGVIPIAAALQQPFCDIVELSFHNNKIGCDAASYLGQALRAAPKLKH 185

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINV 129
           L+LG   L+  GA+ IA+ +     L  ++LT N IS +GG +LV+A+   T  ++++N+
Sbjct: 186 LHLGYNALRDNGAAQIARSVPHAACLSTLDLTANRISREGGEELVRALMTPTCTVQRLNL 245

Query: 130 SENQFGEEGV 139
             NQ   E +
Sbjct: 246 RHNQLDSETI 255



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 23/242 (9%)

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
           H   ++G  L  LDLS+N    +GV  +A  L+   C  + EL  +NN +G      L +
Sbjct: 117 HTLSRSGCGLKVLDLSENNITKLGVIPIAAALQQPFC-DIVELSFHNNKIGCDAASYLGQ 175

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           AL           +P  LK    G N L + GA  +A        L  +++  N I   G
Sbjct: 176 AL---------RAAP-KLKHLHLGYNALRDNGAAQIARSVPHAACLSTLDLTANRISREG 225

Query: 338 ITALSDAFE------ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
              L  A        +  NLRH  L+  TI           ++   SL  L LG      
Sbjct: 226 GEELVRALMTPTCTVQRLNLRHNQLDSETIVL-----FADVIAHNTSLIQLFLGFMNPSP 280

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGV 450
             A+++   +  N  L  +++   +++ +  L L++A++ K T L  +     +F    V
Sbjct: 281 EAAAAVLSAIPQNHALLLLDIYGWKLNPKNTLALIQAVQEKNTTLAALVTDACEFIAPQV 340

Query: 451 EE 452
           +E
Sbjct: 341 DE 342


>gi|242062340|ref|XP_002452459.1| hypothetical protein SORBIDRAFT_04g026160 [Sorghum bicolor]
 gi|241932290|gb|EES05435.1| hypothetical protein SORBIDRAFT_04g026160 [Sorghum bicolor]
          Length = 558

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 70/294 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L++SDNA G  GV   ++LL+S    +LEEL + N+G+        +KAL +  
Sbjct: 228 GSVLRYLNISDNALGEKGVRAFSELLKSQE--SLEELYVMNDGISEEA----AKALSELI 281

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +++K      LKV     N   +EGA  +A + K+   +E        I   G  ALS+
Sbjct: 282 PATEK------LKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSE 335

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD----------------- 386
           A      L+ L+L DN       + L + L KLP L  L L D                 
Sbjct: 336 ALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIAIVKALKQ 395

Query: 387 -------------------------CL---------------LKSAGASSIAKYLTD-NT 405
                                    CL               LK  GA  IAK L D +T
Sbjct: 396 SAPQLEVLEMAGNEINAKAAPDLAECLTAMQSLKKLTLAENELKDGGAVIIAKSLEDGHT 455

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L++++++ N +   G     +A+ +K    Q+N++ N   +EG++E+++++K+
Sbjct: 456 DLKELDVSTNMLQRVGARCFARAVADKPAFVQLNINGNFISDEGIDEVKEILKA 509



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +E        I   G  ALS+A     +L+ L+L DN       + L + 
Sbjct: 305 IAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKT 364

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           L KLP L  L L D  L++ G  +I K L  +   LE + +  NEI+ +   DL + +  
Sbjct: 365 LPKLPDLVELYLSDLNLENEGTIAIVKALKQSAPQLEVLEMAGNEINAKAAPDLAECLTA 424

Query: 121 KTKLKQINVSENQFGEEG 138
              LK++ ++EN+  + G
Sbjct: 425 MQSLKKLTLAENELKDGG 442



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A+  A +++  +L  L +  N I  K A  L +
Sbjct: 361 LSKTLPKLPDLVELYLSDLNLENEGTIAIVKALKQSAPQLEVLEMAGNEINAKAAPDLAE 420

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D +T L++++++ N +   G     +A+ 
Sbjct: 421 CLTAMQSLKKLTLAENELKDGGAVIIAKSLEDGHTDLKELDVSTNMLQRVGARCFARAVA 480

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           +K    Q+N++ N   +EG++E+++++K+
Sbjct: 481 DKPAFVQLNINGNFISDEGIDEVKEILKA 509



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            +N   GI    +    L    ES K + + + +  F+AGR   E+E   ++    K L+
Sbjct: 174 FSNRSFGIGAANVAGPIL----ESVKNQLTEVDISDFVAGRP--EDEALDVMRIFSKALE 227

Query: 322 --TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N +   G+ A S+  +  ++L  L + ++ I+ + A  L + +     L
Sbjct: 228 GSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKL 287

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK+++
Sbjct: 288 KVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLD 347

Query: 440 VSENQFG 446
           + +N FG
Sbjct: 348 LRDNLFG 354



 Score = 45.1 bits (105), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 61/125 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A S+  +  + L  L + ++ I+ + A  L + +     L +
Sbjct: 230 VLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKV 289

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 290 LHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLR 349

Query: 131 ENQFG 135
           +N FG
Sbjct: 350 DNLFG 354



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 106/243 (43%), Gaps = 18/243 (7%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG------ITGCKLL 275
           K G     +  S+ +FG IG   +A  +  S    L E+ +++   G      +   ++ 
Sbjct: 164 KPGNSYQRICFSNRSFG-IGAANVAGPILESVKNQLTEVDISDFVAGRPEDEALDVMRIF 222

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           SKAL         EGS   L+      N L  +G +  + + K  ++LE + +  +GI  
Sbjct: 223 SKAL---------EGS--VLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISE 271

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
               ALS+     + L+ L+ ++N    +GA+ + + + + P++         + S G  
Sbjct: 272 EAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGV 331

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           ++++ L   T L+ ++L  N   V  GL L K +     L ++ +S+     EG   + K
Sbjct: 332 ALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDLVELYLSDLNLENEGTIAIVK 391

Query: 456 LMK 458
            +K
Sbjct: 392 ALK 394



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 68/143 (47%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + K  ++LE + +  +GI      ALS+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 252 LLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKR 311

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P++         + S G  ++++ L   T L+ ++L  N   V  GL L K +     L
Sbjct: 312 SPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLPKLPDL 371

Query: 125 KQINVSENQFGEEGVEEMEKLMK 147
            ++ +S+     EG   + K +K
Sbjct: 372 VELYLSDLNLENEGTIAIVKALK 394


>gi|145346694|ref|XP_001417819.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578047|gb|ABO96112.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 432

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 13/230 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A+L  +DLSDNAFG  GV     LL+      L  +   NNG+     + + + L     
Sbjct: 129 AKLTSVDLSDNAFGEKGVRACTKLLQGQT--ELTSIAFLNNGISEQAARAILELL----- 181

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
                  P  L  F   +N   NEG   +AA+  K   ++  +M  +  +  G   L++A
Sbjct: 182 -----ACPEKLTRFHLDKNMTGNEGTVHIAAIVAKATGMKDFKMAGSRFFCEGAIMLAEA 236

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL-GDCLLKSAGASSIAKYLTD 403
                +L  L+LNDN +  +GA  L + L K P+L  LNL    L    G + +      
Sbjct: 237 LSHGNSLERLDLNDNNVNEEGAEALVKVLPKHPNLQFLNLEATALGPDMGGTLLMAVAKG 296

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
              LE ++++ N+   +G   +  A+     LK + + +N  G+ G  ++
Sbjct: 297 CPKLEVLHVSSNDFEREGAEAVAHAIAEMKNLKVLTIGDNILGDYGFTQV 346



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 4/134 (2%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
           KL  L+++ N    +GA  +  A++++ +L +L +GD +L   G + +   L+  N  L 
Sbjct: 299 KLEVLHVSSNDFEREGAEAVAHAIAEMKNLKVLTIGDNILGDYGFTQVCMALSQSNAPLV 358

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
            ++ +CNE+   G +   +   +K   + +N+  N   E+ VEE+  ++ + G+  AL  
Sbjct: 359 RLDASCNELQKSGAIAAAQLAASKPGFEHLNLDGNMIPEDTVEEIRAILSAAGIEHALAP 418

Query: 158 EDD---EGECSDEE 168
            +D   EGE  DEE
Sbjct: 419 MEDNDPEGEADDEE 432


>gi|15239712|ref|NP_197433.1| RAN GTPase-activating protein 2 [Arabidopsis thaliana]
 gi|205829463|sp|Q9M651.2|RAGP2_ARATH RecName: Full=RAN GTPase-activating protein 2; Short=AtRanGAP2;
           Short=RanGAP2
 gi|332005302|gb|AED92685.1| RAN GTPase-activating protein 2 [Arabidopsis thaliana]
          Length = 545

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S    +LEEL L N+G+     K  ++A+ +  
Sbjct: 213 GSILSSLNLSDNALGEKGVRAFGALLKSLS--SLEELYLMNDGIS----KEAAQAVSELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++       L+V     N   +EGA  +A V K+   LE        +   G  ALS+
Sbjct: 267 PSTEN------LRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A E   ++  L+L DN    +  + L + LS    +  L L    L+  GA +I   L +
Sbjct: 321 ALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKE 380

Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           + + +E + +  N+I+V+    +   +  K  L ++N+SEN+  +EG
Sbjct: 381 SASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEG 427



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K+   LE+       +   G  ALS+A E    +  L+L DN    +  + L + 
Sbjct: 290 IAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKT 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           LS    +  L L    L+  GA +I   L ++ + +E + +  N+I+V+    +   +  
Sbjct: 350 LSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAA 409

Query: 121 KTKLKQINVSENQFGEEG 138
           K  L ++N+SEN+  +EG
Sbjct: 410 KQDLNKLNLSENELKDEG 427



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 4/155 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N +   G+ A     +    L  L L ++ I+ + A  + + +    +L +L
Sbjct: 216 LSSLNLSDNALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LE+   +   +  +GG+ L +A+++ T ++++++ +
Sbjct: 276 HFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRD 335

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLE----DDEG 162
           N FG E    + K + SF     L L     +DEG
Sbjct: 336 NMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEG 370


>gi|356501981|ref|XP_003519801.1| PREDICTED: protein NLRC3-like [Glycine max]
          Length = 606

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 172/384 (44%), Gaps = 33/384 (8%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           + +AG  +    L  N TL+ ++L+ N +  +G   L   + N + ++++ ++    G+E
Sbjct: 211 ITAAGLRAFDGVLQSNITLKTLDLSGNLVGDEGAKCLCDILVNNSSIEKLQLNSADLGDE 270

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G + + +++K       L L ++  E S       +  EN                    
Sbjct: 271 GAKAIAEMLKKNSSLRVLELNNNMIEYSGFSSLAGALLEN-------------------- 310

Query: 198 NASNQSHNNSNQSHNT-SNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
           N+    H N N      +N    +L++   L EL L  N+ G  G+  L   L SS    
Sbjct: 311 NSIRNIHLNGNYGGALGANALAKALESNKSLRELHLHGNSIGDEGIRSLMTGL-SSHKGK 369

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L  L + NN L   G      A H   E  KK  S L L +++   N + +EGA+ +A  
Sbjct: 370 LTLLDIGNNSLTAKG------AFH-VAEYIKKSKSLLWLNLYM---NDIGDEGAEKIAVA 419

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            K+ +++  +++  N I+  G+ A++   ++N  +  L L+ N I   GA  L + L   
Sbjct: 420 LKENRSISTLDLGGNNIHVDGVNAIAQVLKDNLVITTLELSYNPIGPDGAKALAEVLKFH 479

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-L 435
            ++  L LG C + + GA  IA  L  NTT+  ++L  N +  +G   L +++K   + L
Sbjct: 480 GNIKTLKLGWCQIGAKGAEFIADALKYNTTISILDLRANGLRDEGAQSLARSLKVVNEAL 539

Query: 436 KQINVSENQFGEEGVEEMEKLMKS 459
             +++  N+  ++G   + + +KS
Sbjct: 540 TSLDLGFNEIRDDGAFAIAQALKS 563



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 47/275 (17%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS+++LKT      LDLS N  G  G + L D+L ++   ++E+L+LN+  LG  G K +
Sbjct: 224 QSNITLKT------LDLSGNLVGDEGAKCLCDILVNNS--SIEKLQLNSADLGDEGAKAI 275

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           ++ L       KK  S   L+V     N +E  G   LA    +  ++  + +  N    
Sbjct: 276 AEML-------KKNSS---LRVLELNNNMIEYSGFSSLAGALLENNSIRNIHLNGNYGGA 325

Query: 336 VGITALSDAFEENKNLRHLNLNDNTI-----------------------------TYKGA 366
           +G  AL+ A E NK+LR L+L+ N+I                             T KGA
Sbjct: 326 LGANALAKALESNKSLRELHLHGNSIGDEGIRSLMTGLSSHKGKLTLLDIGNNSLTAKGA 385

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + + + K  SL  LNL    +   GA  IA  L +N ++  ++L  N I V G   + 
Sbjct: 386 FHVAEYIKKSKSLLWLNLYMNDIGDEGAEKIAVALKENRSISTLDLGGNNIHVDGVNAIA 445

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           + +K+   +  + +S N  G +G + + +++K  G
Sbjct: 446 QVLKDNLVITTLELSYNPIGPDGAKALAEVLKFHG 480



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 174/391 (44%), Gaps = 33/391 (8%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +++  N +   G   L D    N  +  L LN   +  +GA  + + L K  SL +
Sbjct: 228 TLKTLDLSGNLVGDEGAKCLCDILVNNSSIEKLQLNSADLGDEGAKAIAEMLKKNSSLRV 287

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L + +++ +G SS+A  L +N ++ +++L  N     G   L KA+++   L+++++ 
Sbjct: 288 LELNNNMIEYSGFSSLAGALLENNSIRNIHLNGNYGGALGANALAKALESNKSLRELHLH 347

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N  G+EG+  +   + S      L+   D G              N   A+G      +
Sbjct: 348 GNSIGDEGIRSLMTGLSSHKGKLTLL---DIG-------------NNSLTAKGAFHVAEY 391

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
              + S    N   N+       + +  ++LK    +  LDL  N     GV  +A +L+
Sbjct: 392 IKKSKSLLWLNLYMNDIGDEG--AEKIAVALKENRSISTLDLGGNNIHVDGVNAIAQVLK 449

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +    +  L+L+ N +G  G K L++ L       K  G+   LK+   G  ++  +GA
Sbjct: 450 DNLV--ITTLELSYNPIGPDGAKALAEVL-------KFHGNIKTLKL---GWCQIGAKGA 497

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE-ENKNLRHLNLNDNTITYKGAIPL 369
           + +A   K   T+  +++  NG+   G  +L+ + +  N+ L  L+L  N I   GA  +
Sbjct: 498 EFIADALKYNTTISILDLRANGLRDEGAQSLARSLKVVNEALTSLDLGFNEIRDDGAFAI 557

Query: 370 GQALSKLPSLAI--LNLGDCLLKSAGASSIA 398
            QAL     +A+  LN+G   L   G  ++A
Sbjct: 558 AQALKSNDDVAVTSLNIGSNFLTKFGQGALA 588



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 17/232 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCF--ALEELKLNNNGLGITGCKLLSKALHDCYESSK 287
           +D+S   FG  G+  LA+    S  F    EE+    NG+   G +     L        
Sbjct: 176 IDMSGRNFGDEGLFFLAE----SLAFNQTAEEVSFAANGITAAGLRAFDGVLQ------- 224

Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
              S + LK      N + +EGAK L  +     ++E++++    +   G  A+++  ++
Sbjct: 225 ---SNITLKTLDLSGNLVGDEGAKCLCDILVNNSSIEKLQLNSADLGDEGAKAIAEMLKK 281

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
           N +LR L LN+N I Y G   L  AL +  S+  ++L      + GA+++AK L  N +L
Sbjct: 282 NSSLRVLELNNNMIEYSGFSSLAGALLENNSIRNIHLNGNYGGALGANALAKALESNKSL 341

Query: 408 EDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEMEKLMK 458
            +++L  N I  +G   L+  + + K KL  +++  N    +G   + + +K
Sbjct: 342 RELHLHGNSIGDEGIRSLMTGLSSHKGKLTLLDIGNNSLTAKGAFHVAEYIK 393



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 158/377 (41%), Gaps = 67/377 (17%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + KK  +L  +E+  N I + G ++L+ A  EN  +R+++LN N     GA  L +A
Sbjct: 275 IAEMLKKNSSLRVLELNNNMIEYSGFSSLAGALLENNSIRNIHLNGNYGGALGANALAKA 334

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT---TLEDVNLTCNEISVQGGLDLVKAM 118
           L    SL  L+L    +   G  S+   L+ +    TL D+    N ++ +G   + + +
Sbjct: 335 LESNKSLRELHLHGNSIGDEGIRSLMTGLSSHKGKLTLLDIG--NNSLTAKGAFHVAEYI 392

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEND 178
           K    L  +N+  N  G+EG E++   +K                        E+   + 
Sbjct: 393 KKSKSLLWLNLYMNDIGDEGAEKIAVALK------------------------ENRSIST 428

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
            D  G+N    H D                      N     LK    +  L+LS N  G
Sbjct: 429 LDLGGNN---IHVDG--------------------VNAIAQVLKDNLVITTLELSYNPIG 465

Query: 239 PIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF 298
           P G + LA++L+      ++ LKL    +G  G + ++ AL   Y ++    S L L+  
Sbjct: 466 PDGAKALAEVLKFHGN--IKTLKLGWCQIGAKGAEFIADALK--YNTTI---SILDLRA- 517

Query: 299 IAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--LRHLN 355
               N L +EGA+ LA   K + + L  +++  N I   G  A++ A + N +  +  LN
Sbjct: 518 ----NGLRDEGAQSLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDVAVTSLN 573

Query: 356 LNDNTITYKGAIPLGQA 372
           +  N +T  G   L  A
Sbjct: 574 IGSNFLTKFGQGALADA 590


>gi|6708468|gb|AAF25948.1|AF214560_1 RAN GTPase activating protein 2 [Arabidopsis thaliana]
          Length = 545

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S    +LEEL L N+G+     K  ++A+ +  
Sbjct: 213 GSILSSLNLSDNALGEKGVRAFGALLKSLS--SLEELYLMNDGIS----KEAAQAVSELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++       L+V     N   +EGA  +A V K+   LE        +   G  ALS+
Sbjct: 267 PSTEN------LRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A E   ++  L+L DN    +  + L + LS    +  L L    L+  GA +I   L +
Sbjct: 321 ALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKE 380

Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           + + +E + +  N+I+V+    +   +  K  L ++N+SEN+  +EG
Sbjct: 381 SASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEG 427



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K+   LE+       +   G  ALS+A E    +  L+L DN    +  + L + 
Sbjct: 290 IAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKT 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           LS    +  L L    L+  GA +I   L ++ + +E + +  N+I+V+    +   +  
Sbjct: 350 LSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAA 409

Query: 121 KTKLKQINVSENQFGEEG 138
           K  L ++N+SEN+  +EG
Sbjct: 410 KQDLNKLNLSENELKDEG 427



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 4/155 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N +   G+ A     +    L  L L ++ I+ + A  + + +    +L +L
Sbjct: 216 LSSLNLSDNALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LE+   +   +  +GG+ L +A+++ T ++++++ +
Sbjct: 276 HFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRD 335

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLE----DDEG 162
           N FG E    + K + SF     L L     +DEG
Sbjct: 336 NMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEG 370



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 71  LNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           LNL +  LK  G   IA  + + N+ L+ ++++ N I   G   L   +  K   K +N+
Sbjct: 416 LNLSENELKDEGCVQIANCIEEVNSKLQYIDMSTNYIRRAGARALAHVVVKKEAFKLLNI 475

Query: 130 SENQFGEEGVEEMEKLMK 147
             N   EEG+EE++++ K
Sbjct: 476 DGNIISEEGIEELKEIFK 493


>gi|320170130|gb|EFW47029.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 361

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 83/157 (52%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ + G + +A      KTL  +++ QN I   G  A++DA   NK L  LNL  N I
Sbjct: 18  QNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLNQI 77

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +AL    +L  L L +  L  AGA +IA+ L  N TL  +NL  NE    G
Sbjct: 78  GDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGDVG 137

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              + +A+K    LK++N+ ++Q G+ G + + K +K
Sbjct: 138 AQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALK 174



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 74/138 (53%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KTL  +++ QN I   G  A++DA   NK L  LNL  N I   GA  + +AL    +L 
Sbjct: 37  KTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLNQIGDAGARAIAEALRVNTTLN 96

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L +  L  AGA +IA+ L  N TL  +NL  NE    G   + +A+K    LK++N+
Sbjct: 97  KLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGDVGAQAIAEALKVNMTLKELNL 156

Query: 130 SENQFGEEGVEEMEKLMK 147
            ++Q G+ G + + K +K
Sbjct: 157 EKSQIGDIGAQAIAKALK 174



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           + QN I  VG  A+++A   NK L  L+L+ N I   GA  +  AL    +L+ LNL   
Sbjct: 16  LWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLN 75

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
            +  AGA +IA+ L  NTTL  + L  N++   G   + +A+K    L ++N+  N+ G+
Sbjct: 76  QIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGD 135

Query: 137 EGVEEMEKLMK 147
            G + + + +K
Sbjct: 136 VGAQAIAEALK 146



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 12/167 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L     L  LDLS N  G  G   +AD LR +   +   L+LN   +G  G + +++AL
Sbjct: 32  ALNVNKTLSWLDLSQNQIGDAGARAIADALRVNKTLSWLNLQLNQ--IGDAGARAIAEAL 89

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   +  + L  K+F+   N+L + GA  +A   K  KTL R+ +  N    VG  
Sbjct: 90  --------RVNTTLN-KLFLE-ENQLGDAGAYAIAEALKLNKTLFRLNLYNNETGDVGAQ 139

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
           A+++A + N  L+ LNL  + I   GA  + +AL    ++  L++ D
Sbjct: 140 AIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDIDD 186



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 63/122 (51%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KTL  + +  N I   G  A+++A   N  L  L L +N +   GA  + +AL    +L 
Sbjct: 65  KTLSWLNLQLNQIGDAGARAIAEALRVNTTLNKLFLEENQLGDAGAYAIAEALKLNKTLF 124

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            LNL +      GA +IA+ L  N TL+++NL  ++I   G   + KA+K  T + ++++
Sbjct: 125 RLNLYNNETGDVGAQAIAEALKVNMTLKELNLEKSQIGDIGAQAIAKALKVNTTVTELDI 184

Query: 130 SE 131
            +
Sbjct: 185 DD 186



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 28/131 (21%)

Query: 328 MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
           + QN I  VG  A+++A   NK L  L+L+ N I                       GD 
Sbjct: 16  LWQNQIGDVGGQAIAEALNVNKTLSWLDLSQNQI-----------------------GD- 51

Query: 388 LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
               AGA +IA  L  N TL  +NL  N+I   G   + +A++  T L ++ + ENQ G+
Sbjct: 52  ----AGARAIADALRVNKTLSWLNLQLNQIGDAGARAIAEALRVNTTLNKLFLEENQLGD 107

Query: 448 EGVEEMEKLMK 458
            G   + + +K
Sbjct: 108 AGAYAIAEALK 118


>gi|125553178|gb|EAY98887.1| hypothetical protein OsI_20842 [Oryza sativa Indica Group]
          Length = 544

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 70/294 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L++SDNA G  GV    +LL+S     LEEL + N+G+        ++AL +  
Sbjct: 214 GSVLRYLNISDNALGEKGVRAFEELLKSQD--NLEELYVMNDGISEEA----AQALSELI 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LK+     N   +EGA  +A + K+   LE        I   G  AL++
Sbjct: 268 PSTEK------LKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAE 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL----------------AILN---- 383
           A      L+ L+L DN    +  + L + LSKLP L                AI+N    
Sbjct: 322 ALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQ 381

Query: 384 ----------------------LGDCL---------------LKSAGASSIAKYLTD-NT 405
                                 L +CL               LK  GA  IAK L D + 
Sbjct: 382 SAPQLEVLEMAGNEINAKASQALAECLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQ 441

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L++++++ N +   G     +A+ NK    Q+N++ N   +EG++E++ ++KS
Sbjct: 442 DLKELDVSTNMLQRVGARCFAQAIANKPGFVQLNINGNFISDEGIDEVKDILKS 495



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 8/217 (3%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           A + +  +N   GI    +    L    ES KK+ + + +  F+AGR   E+E   ++  
Sbjct: 154 AYKRICFSNRSFGIGAANVAGPIL----ESIKKQLTEVDISDFVAGRP--EDEALDVMRI 207

Query: 316 VFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
             K L+   L  + +  N +   G+ A  +  +   NL  L + ++ I+ + A  L + +
Sbjct: 208 FSKALEGSVLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELI 267

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
                L IL+  + +    GA  IA+ +  +  LE    +   I   GG+ L +A+   T
Sbjct: 268 PSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCT 327

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           +LK++++ +N FG E    + K +        L L D
Sbjct: 328 RLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +A + K+   LE        I   G  AL++A     +L+ L+L DN    +  + L +
Sbjct: 290 FIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAGLALSK 349

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMK 119
            LSKLP L  L L D  L++ G  +I   L  +   LE + +  NEI+ +    L + + 
Sbjct: 350 TLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAKASQALAECLT 409

Query: 120 NKTKLKQINVSENQFGEEG 138
               LK++ ++EN+  ++G
Sbjct: 410 AMQSLKKLTLAENELKDDG 428



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  A+ +  +++  +L  L +  N I  K +  L +
Sbjct: 347 LSKTLSKLPDLVELYLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAKASQALAE 406

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D +  L++++++ N +   G     +A+ 
Sbjct: 407 CLTAMQSLKKLTLAENELKDDGAVVIAKSLEDGHQDLKELDVSTNMLQRVGARCFAQAIA 466

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           NK    Q+N++ N   +EG++E++ ++KS
Sbjct: 467 NKPGFVQLNINGNFISDEGIDEVKDILKS 495



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 66/149 (44%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A  +  +    L  L + ++ I+ + A  L + +     L I
Sbjct: 216 VLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKI 275

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  LE    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 276 LHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLR 335

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           +N FG E    + K +        L L D
Sbjct: 336 DNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 18/228 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG------ITGCKL 274
           +K G     +  S+ +FG IG   +A  +  S    L E+ +++   G      +   ++
Sbjct: 149 IKPGNAYKRICFSNRSFG-IGAANVAGPILESIKKQLTEVDISDFVAGRPEDEALDVMRI 207

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
            SKAL         EGS   L+      N L  +G +    + K    LE + +  +GI 
Sbjct: 208 FSKAL---------EGS--VLRYLNISDNALGEKGVRAFEELLKSQDNLEELYVMNDGIS 256

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
                ALS+     + L+ L+ ++N    +GA+ + + + + P+L         + S G 
Sbjct: 257 EEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPNLESFRCSATRIGSDGG 316

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
            ++A+ L   T L+ ++L  N   V+ GL L K +     L ++ +S+
Sbjct: 317 VALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSD 364



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 61/127 (48%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + K    LE + +  +GI      ALS+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 238 LLKSQDNLEELYVMNDGISEEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKR 297

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P+L         + S G  ++A+ L   T L+ ++L  N   V+ GL L K +     L
Sbjct: 298 SPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDL 357

Query: 125 KQINVSE 131
            ++ +S+
Sbjct: 358 VELYLSD 364


>gi|320163559|gb|EFW40458.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 416

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 79/150 (52%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GAK +A   +  KTL+ + + QN I   G  A++     N  L  L LNDN +   GA  
Sbjct: 48  GAKAIAEALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQA 107

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +AL+   +LA L+LG+  +  AGA + A  L  N  L +++L+ N+I   G   + +A
Sbjct: 108 IAEALTVNGTLATLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQAIAEA 167

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +K  T L Q    +NQ G+ G + + + +K
Sbjct: 168 LKLNTTLTQFYFYKNQVGDAGAQAIAEALK 197



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 74/138 (53%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KTL+H+ + QN I   G  A++     N  L  L LNDN +   GA  + +AL+   +LA
Sbjct: 60  KTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQAIAEALTVNGTLA 119

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+LG+  +  AGA + A  L  N  L +++L+ N+I   G   + +A+K  T L Q   
Sbjct: 120 TLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQAIAEALKLNTTLTQFYF 179

Query: 130 SENQFGEEGVEEMEKLMK 147
            +NQ G+ G + + + +K
Sbjct: 180 YKNQVGDAGAQAIAEALK 197



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 51/254 (20%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A+++A   NK L+HL L  N I   GA+ + Q L    +L  L L D  L   GA +
Sbjct: 48  GAKAIAEALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQLGDGGAQA 107

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA+ LT N TL  ++L  N+I   G      A+K    L ++++S NQ G+ G + + + 
Sbjct: 108 IAEALTVNGTLATLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQAIAEA 167

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
           +K                                     N+ L+            Q + 
Sbjct: 168 LKL------------------------------------NTTLT------------QFYF 179

Query: 206 NSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
             NQ  +   Q+   +LK  + L E++L  N  G  G + +A+ L+ +    L  LKLNN
Sbjct: 180 YKNQVGDAGAQAIAEALKVNSSLTEVNLDTNQIGDAGAQAIAEALKVNTT--LTALKLNN 237

Query: 265 NGLGITGCKLLSKA 278
           N +   G + +  A
Sbjct: 238 NCISDVGVQAIDGA 251



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 12/221 (5%)

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
           +   G  G + +A+ LR +    L+ L L  N +G  G   +++ L              
Sbjct: 41  NTVIGDAGAKAIAEALRLNKT--LQHLYLQQNQIGDDGALAIAQTLR----------VNT 88

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
            L       N+L + GA+ +A       TL  + + +N I   G  A +DA + NK L  
Sbjct: 89  TLHTLYLNDNQLGDGGAQAIAEALTVNGTLATLSLGENQIGDAGARATADALKVNKALTE 148

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           L+L+ N I   GA  + +AL    +L         +  AGA +IA+ L  N++L +VNL 
Sbjct: 149 LHLSGNQIGDAGAQAIAEALKLNTTLTQFYFYKNQVGDAGAQAIAEALKVNSSLTEVNLD 208

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            N+I   G   + +A+K  T L  + ++ N   + GV+ ++
Sbjct: 209 TNQIGDAGAQAIAEALKVNTTLTALKLNNNCISDVGVQAID 249



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 13/214 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L  L L  N  G  G   +A  LR +    L  L LN+N LG  G + +++AL
Sbjct: 55  ALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTT--LHTLYLNDNQLGDGGAQAIAEAL 112

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                     G+   L     G N++ + GA+  A   K  K L  + +  N I   G  
Sbjct: 113 -------TVNGT---LATLSLGENQIGDAGARATADALKVNKALTELHLSGNQIGDAGAQ 162

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + N  L       N +   GA  + +AL    SL  +NL    +  AGA +IA+
Sbjct: 163 AIAEALKLNTTLTQFYFYKNQVGDAGAQAIAEALKVNSSLTEVNLDTNQIGDAGAQAIAE 222

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            L  NTTL  + L  N IS   G+  +   +N T
Sbjct: 223 ALKVNTTLTALKLNNNCIS-DVGVQAIDGARNGT 255



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%)

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           + ++  AGA +IA+ L  N TL+ + L  N+I   G L + + ++  T L  + +++NQ 
Sbjct: 41  NTVIGDAGAKAIAEALRLNKTLQHLYLQQNQIGDDGALAIAQTLRVNTTLHTLYLNDNQL 100

Query: 446 GEEGVEEMEKLMKSFGMAAALVLEDDE 472
           G+ G + + + +   G  A L L +++
Sbjct: 101 GDGGAQAIAEALTVNGTLATLSLGENQ 127



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 1/113 (0%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K L  + +  N I   G  A+++A + N  L       N +   GA  + +AL    SL 
Sbjct: 144 KALTELHLSGNQIGDAGAQAIAEALKLNTTLTQFYFYKNQVGDAGAQAIAEALKVNSSLT 203

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
            +NL    +  AGA +IA+ L  NTTL  + L  N IS   G+  +   +N T
Sbjct: 204 EVNLDTNQIGDAGAQAIAEALKVNTTLTALKLNNNCIS-DVGVQAIDGARNGT 255


>gi|157871864|ref|XP_001684481.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68127550|emb|CAJ05604.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 747

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 29/215 (13%)

Query: 253 CCFA-----------LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           CC A           L  L L  N  G+ G   L +A+         E +P  ++    G
Sbjct: 53  CCVAEVIRTLSDESQLRVLVLEENSFGLPGVTALMEAI---------EANPNRIRELRLG 103

Query: 302 RNRLENEGAKMLAAVFKK----LKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNL 356
           +N L+++ A ++     +    LK L+   + +N I  +G+  ++ A ++   ++  L+ 
Sbjct: 104 KNNLKDQAAVVIGHTLSRNGCGLKVLD---LSENNITKLGVIPIAAALQQPFCDIVELSF 160

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
           ++N I    A  LGQAL   P L  L+LG   L+  GA+ IA+ +     L  ++LT N 
Sbjct: 161 HNNKIECDAASYLGQALRAAPKLKHLHLGYNALRDNGATQIARSVPHAACLSTLDLTANR 220

Query: 417 ISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGV 450
           IS +GG +LV+A+   T  ++++N+  NQ   E +
Sbjct: 221 ISREGGEELVRALMTPTCTVQRLNLRYNQLDSETI 255



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ +++ +N I  +G+  ++ A ++    +  L+ ++N I    A  LGQAL   P L  
Sbjct: 126 LKVLDLSENNITKLGVIPIAAALQQPFCDIVELSFHNNKIECDAASYLGQALRAAPKLKH 185

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINV 129
           L+LG   L+  GA+ IA+ +     L  ++LT N IS +GG +LV+A+   T  ++++N+
Sbjct: 186 LHLGYNALRDNGATQIARSVPHAACLSTLDLTANRISREGGEELVRALMTPTCTVQRLNL 245

Query: 130 SENQFGEEGV 139
             NQ   E +
Sbjct: 246 RYNQLDSETI 255


>gi|32966215|gb|AAP92144.1| leucine-rich repeat protein N5C [synthetic construct]
          Length = 358

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           ARL  L L +N     G++ LA +LRS+   +L EL L++N LG  G +LL + L D   
Sbjct: 39  ARLERLWLENNDLTEAGLKDLASVLRSNP--SLRELNLSHNKLGDAGVRLLLQGLLDPGT 96

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
             +K                L   G K LA+V +   +L  + +  N +   G+  L   
Sbjct: 97  RLEK---------LDLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQG 147

Query: 345 F-EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             +    L  L L DN +T  G   L   L   PSL  LNL D  L  AG   + + L D
Sbjct: 148 LLDPGTRLEKLYLEDNDLTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLLQGLLD 207

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
             T LE++ L   +++  G  DL   +++   L+++++S N+ G+ GV 
Sbjct: 208 PGTRLEELQLRNTDLTEAGVEDLASVLRSNPSLRELSLSNNKLGDAGVR 256



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 132/305 (43%), Gaps = 31/305 (10%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
           +L  L L +N +T  G   L   L   PSL  LNL    L  AG   + + L D  T LE
Sbjct: 40  RLERLWLENNDLTEAGLKDLASVLRSNPSLRELNLSHNKLGDAGVRLLLQGLLDPGTRLE 99

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE-EMEKLMKSFGMAAALV 156
            ++L   +++  G  DL   +++   L+++++S N+ G+ GV   ++ L+        L 
Sbjct: 100 KLDLNDTDLTEAGVKDLASVLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLY 159

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
           LED                 ND    G     S   SN S    N S N    +      
Sbjct: 160 LED-----------------NDLTEAGLKDLASVLRSNPSLRELNLSDNKLGDAGVRLLL 202

Query: 217 SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS 276
             + L  G RL EL L +      GVE LA +LRS+   +L EL L+NN LG  G +LL 
Sbjct: 203 QGL-LDPGTRLEELQLRNTDLTEAGVEDLASVLRSNP--SLRELSLSNNKLGDAGVRLLL 259

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
           + L D        G+ L  K+++   + L   G K LA+V +   +L  + +  N +   
Sbjct: 260 QGLLDP-------GTRLE-KLYLRNTD-LTEAGMKDLASVLRSNPSLRELSLSTNKLGDA 310

Query: 337 GITAL 341
           G+  L
Sbjct: 311 GVRLL 315



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 127/288 (44%), Gaps = 33/288 (11%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA+V +   +L  + +  N +   G+  L     +   +L  L+LND  +T  G   L  
Sbjct: 59  LASVLRSNPSLRELNLSHNKLGDAGVRLLLQGLLDPGTRLEKLDLNDTDLTEAGVKDLAS 118

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L   PSL  L+L    L  AG   + + L D  T LE + L  N+++  G  DL   ++
Sbjct: 119 VLRSNPSLRELSLSTNKLGDAGVRLLLQGLLDPGTRLEKLYLEDNDLTEAGLKDLASVLR 178

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
           +   L+++N+S+N+ G+ GV               L+L   +G      + EE +  N  
Sbjct: 179 SNPSLRELNLSDNKLGDAGVR--------------LLL---QGLLDPGTRLEELQLRNTD 221

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS------LKTGARLVELDLS 233
             E    +L+      S   SN S    + S+N    + +       L  G RL +L L 
Sbjct: 222 LTEAGVEDLA------SVLRSNPSLRELSLSNNKLGDAGVRLLLQGLLDPGTRLEKLYLR 275

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
           +      G++ LA +LRS+   +L EL L+ N LG  G +LL + L D
Sbjct: 276 NTDLTEAGMKDLASVLRSNP--SLRELSLSTNKLGDAGVRLLLQGLLD 321


>gi|332236198|ref|XP_003267290.1| PREDICTED: LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing
            protein 3 [Nomascus leucogenys]
          Length = 1016

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 16/251 (6%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 763  SHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLL--------CVGLKHLFCNLKKLWL 814

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S  +   ++      S   L     G N L + G  +L    K  +  L+++ +
Sbjct: 815  VSCCLTSACVRILHQXLSTNHS---LTRLYMGENALGDSGVAILCEKAKNPQCNLQKLGL 871

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  V  +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 872  VNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 930

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 931  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 990

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 991  NYETKSALETL 1001



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 866  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 924

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 925  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 984

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 985  LSEMYFNYETKSALETL 1001


>gi|260799079|ref|XP_002594527.1| hypothetical protein BRAFLDRAFT_124994 [Branchiostoma floridae]
 gi|229279761|gb|EEN50538.1| hypothetical protein BRAFLDRAFT_124994 [Branchiostoma floridae]
          Length = 578

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 19/246 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L +  +  G  G   LA  LR + C  +  L L +N LG+ G   ++ A+ D    S+  
Sbjct: 165 LVMRHHYLGERGWRPLAMALRKNVC--IRHLDLVDNHLGVEGAVAIASAVKDSPYISEMN 222

Query: 290 ---------GSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
                    GS +A        LK  I   N+L +  AK  A   K+  T+  +++ QN 
Sbjct: 223 LSENFLGHGGSAIASMLETNSDLKTLILRANQLGDHEAKTFAEALKRNITMTTLDLSQNQ 282

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
              +G   L      N+ L  LNL+ N +  KG + +   +    SL +L+L    L   
Sbjct: 283 FGELGGIFLGAGIGANEGLNCLNLSWNHLRLKGGVAIAMGIKVNQSLEVLDLSWNGLGDL 342

Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
           GA++  K L  N TL  ++L+ N I+V+G   L   +     L+ + +  N  G+EGV+ 
Sbjct: 343 GATAFGKALRFNKTLRMLDLSNNRITVEGAKKLSLGLAKNEGLETLMLGTNAIGDEGVKA 402

Query: 453 MEKLMK 458
           + K+++
Sbjct: 403 LLKVLE 408



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           EH+ M  + +   G   L+ A  +N  +RHL+L DN +  +GA+ +  A+   P ++ +N
Sbjct: 163 EHLVMRHHYLGERGWRPLAMALRKNVCIRHLDLVDNHLGVEGAVAIASAVKDSPYISEMN 222

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L +  L   G S+IA  L  N+ L+ + L  N++         +A+K    +  +++S+N
Sbjct: 223 LSENFL-GHGGSAIASMLETNSDLKTLILRANQLGDHEAKTFAEALKRNITMTTLDLSQN 281

Query: 133 QFGEEG 138
           QFGE G
Sbjct: 282 QFGELG 287



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 71/146 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A   K+  T+  +++ QN    +G   L      N+ L  LNL+ N +  KG + +   
Sbjct: 263 FAEALKRNITMTTLDLSQNQFGELGGIFLGAGIGANEGLNCLNLSWNHLRLKGGVAIAMG 322

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +    SL +L+L    L   GA++  K L  N TL  ++L+ N I+V+G   L   +   
Sbjct: 323 IKVNQSLEVLDLSWNGLGDLGATAFGKALRFNKTLRMLDLSNNRITVEGAKKLSLGLAKN 382

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L+ + +  N  G+EGV+ + K+++
Sbjct: 383 EGLETLMLGTNAIGDEGVKALLKVLE 408



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 1/111 (0%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N L  +G   +A   K  ++LE +++  NG+  +G TA   A   NK LR L+L++N IT
Sbjct: 309 NHLRLKGGVAIAMGIKVNQSLEVLDLSWNGLGDLGATAFGKALRFNKTLRMLDLSNNRIT 368

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNL 412
            +GA  L   L+K   L  L LG   +   G  ++ K L   NTTL+ + L
Sbjct: 369 VEGAKKLSLGLAKNEGLETLMLGTNAIGDEGVKALLKVLEKKNTTLKVLGL 419



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++LE +++  NG+  +G TA   A   NK LR L+L++N IT +GA  L   L+K   L 
Sbjct: 327 QSLEVLDLSWNGLGDLGATAFGKALRFNKTLRMLDLSNNRITVEGAKKLSLGLAKNEGLE 386

Query: 70  ILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNL 101
            L LG   +   G  ++ K L   NTTL+ + L
Sbjct: 387 TLMLGTNAIGDEGVKALLKVLEKKNTTLKVLGL 419


>gi|320163012|gb|EFW39911.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 353

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 80/148 (54%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NR+ + GA+ +A V K  KTL  + + +N I   G  A+++A   NK L  L L+ N I 
Sbjct: 56  NRMGDAGAQAIAEVLKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIG 115

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL +  +L +L+L +  +   GA +IA+ L  NTTL+ ++L  N+I   G 
Sbjct: 116 DAGAQAIAEALKENKTLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGA 175

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGV 450
             + +A+   T L  I +  N+F   GV
Sbjct: 176 QAIAEALNVNTTLSMIGLDGNRFSLSGV 203



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K  KTL  + + +N I   G  A+++A   NK L  L L+ N I   GA  + +A
Sbjct: 66  IAEVLKVNKTLTALYLDRNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIGDAGAQAIAEA 125

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L +L+L +  +   GA +IA+ L  NTTL+ ++L  N+I   G   + +A+   
Sbjct: 126 LKENKTLTLLSLSENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQAIAEALNVN 185

Query: 122 TKLKQINVSENQFGEEGV 139
           T L  I +  N+F   GV
Sbjct: 186 TTLSMIGLDGNRFSLSGV 203



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 1/134 (0%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           RN++ + GA+ +A      KTL  + +  N I   G  A+++A +ENK L  L+L++N I
Sbjct: 83  RNQIGDAGAQAIAEALTVNKTLTTLYLDWNQIGDAGAQAIAEALKENKTLTLLSLSENRI 142

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + + L    +L  L+L    +  AGA +IA+ L  NTTL  + L  N  S+ G
Sbjct: 143 GDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQAIAEALNVNTTLSMIGLDGNRFSLSG 202

Query: 422 GLDLVKAMKNKTKL 435
            L ++KA+  K  L
Sbjct: 203 VL-ILKAVCKKRWL 215



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           KTL  + +  N I   G  A+++A +ENK L  L+L++N I   GA  + + L    +L 
Sbjct: 102 KTLTTLYLDWNQIGDAGAQAIAEALKENKTLTLLSLSENRIGDDGAWAIAEVLKVNTTLK 161

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            L+L    +  AGA +IA+ L  NTTL  + L  N  S+ G L ++KA+  K  L
Sbjct: 162 KLHLNRNQIGDAGAQAIAEALNVNTTLSMIGLDGNRFSLSGVL-ILKAVCKKRWL 215



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 16/238 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  L L  N  G  G + +A+ L  +    L  L L+ N +G  G + +++AL 
Sbjct: 70  LKVNKTLTALYLDRNQIGDAGAQAIAEAL--TVNKTLTTLYLDWNQIGDAGAQAIAEAL- 126

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                  KE   L L       NR+ ++GA  +A V K   TL+++ + +N I   G  A
Sbjct: 127 -------KENKTLTLLSL--SENRIGDDGAWAIAEVLKVNTTLKKLHLNRNQIGDAGAQA 177

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++A   N  L  + L+ N  +  G + L     K      L+L D L +S     +  Y
Sbjct: 178 IAEALNVNTTLSMIGLDGNRFSLSGVLILKAVCKK----RWLHLEDVLQQSMTPRQLGLY 233

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
                    V L+ N+I +   L + +A+K  T L  + +  NQ G+ G + + + +K
Sbjct: 234 DHVKNGNGAVVLSGNQIGIAEALAIAEALKVNTTLTMLFLQVNQIGDAGAQAIAEALK 291



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++  +ENK +  +   +N +   GA  + + L    +L  L L    +  AGA +IA+
Sbjct: 38  AIAETLKENKTVTTIYF-ENRMGDAGAQAIAEVLKVNKTLTALYLDRNQIGDAGAQAIAE 96

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            LT N TL  + L  N+I   G   + +A+K    L  +++SEN+ G++G   + +++K
Sbjct: 97  ALTVNKTLTTLYLDWNQIGDAGAQAIAEALKENKTLTLLSLSENRIGDDGAWAIAEVLK 155



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++  +ENK +  +   +N +   GA  + + L    +L  L L    +  AGA +IA+
Sbjct: 38  AIAETLKENKTVTTIYF-ENRMGDAGAQAIAEVLKVNKTLTALYLDRNQIGDAGAQAIAE 96

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            LT N TL  + L  N+I   G   + +A+K    L  +++SEN+ G++G   + +++K
Sbjct: 97  ALTVNKTLTTLYLDWNQIGDAGAQAIAEALKENKTLTLLSLSENRIGDDGAWAIAEVLK 155


>gi|357118248|ref|XP_003560868.1| PREDICTED: protein NLRC3-like [Brachypodium distachyon]
          Length = 614

 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 185/426 (43%), Gaps = 49/426 (11%)

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           L +   +L +L  +N+        G   +A+ L  N + E+V+ + N I+  G       
Sbjct: 171 LNRFYKELRTLKNVNMAGRQFGDEGLFFLAESLAYNKSAEEVDFSGNAITAVGIEAFDGI 230

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEK-LMKSFGMAAALVLEDDEGECSDEEQDEESEEE 176
           ++  T LK +N+S N  G+EG + +   L+++ G+   L+   + G              
Sbjct: 231 LQINTALKTLNLSGNAIGDEGAKCLSGILVENVGIQKLLLNSTNIG-------------- 276

Query: 177 NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
            D  A+  +  L  N +        Q  NN  +    ++ +   L+  A L  L L+ N 
Sbjct: 277 -DEGAKAISDMLKKNKTIRIV----QLSNNVIEYSGFASIAEALLENNA-LRSLYLNGNY 330

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD--------------- 281
            GP+G   LA  +  +   +L EL L+ NG    G ++L  AL                 
Sbjct: 331 GGPLGASSLAKGVVGNK--SLRELHLHGNGFVNEGLRVLMSALSSHKGKITVLDIGNNNI 388

Query: 282 -------CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
                    +  K+  S   L +++   N + +EGA+ +A   K+ +T+  ++   N I+
Sbjct: 389 TSEGSLYVADFIKRTKSLRWLSLYM---NDVGDEGAEKVADALKQNQTISTMDFGGNNIH 445

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
             G+TA+++  +EN  L  L L+ N I  +G   L   L     L  L LG C +  +GA
Sbjct: 446 SRGVTAIAETLKENAVLTTLELSYNPIGPEGVKALCDVLKFDGKLQTLKLGWCQIGVSGA 505

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEM 453
             IA  L  NTTL  ++L  N +   G + L +++K     LK +++  N+  ++G   +
Sbjct: 506 EFIADCLKCNTTLSTLDLRANGLGDDGAICLARSLKTINESLKSLDLGFNEIRDDGAFAL 565

Query: 454 EKLMKS 459
            + +K+
Sbjct: 566 AQALKA 571



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 167/375 (44%), Gaps = 69/375 (18%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + KK KT+  V++  N I + G  ++++A  EN  LR L LN N   Y G  PL      
Sbjct: 286 MLKKNKTIRIVQLSNNVIEYSGFASIAEALLENNALRSLYLNGN---YGG--PL------ 334

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTK 123
                            GASS+AK +  N +L +++L  N    +G   L+ A+ + K K
Sbjct: 335 -----------------GASSLAKGVVGNKSLRELHLHGNGFVNEGLRVLMSALSSHKGK 377

Query: 124 LKQINVSENQFGEEG---VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           +  +++  N    EG   V +  K  KS     +L + D   E +++  D   + +  S 
Sbjct: 378 ITVLDIGNNNITSEGSLYVADFIKRTKSL-RWLSLYMNDVGDEGAEKVADALKQNQTIST 436

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
            +   +N+      HS   +  +                +LK  A L  L+LS N  GP 
Sbjct: 437 MDFGGNNI------HSRGVTAIAE---------------TLKENAVLTTLELSYNPIGPE 475

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           GV+ L D+L+      L+ LKL    +G++G + ++    DC + +    S L L+    
Sbjct: 476 GVKALCDVLKFDG--KLQTLKLGWCQIGVSGAEFIA----DCLKCNTTL-STLDLRA--- 525

Query: 301 GRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNL--RHLNLN 357
             N L ++GA  LA   K + ++L+ +++  N I   G  AL+ A + N++L    LNL 
Sbjct: 526 --NGLGDDGAICLARSLKTINESLKSLDLGFNEIRDDGAFALAQALKANEDLAITSLNLA 583

Query: 358 DNTITYKGAIPLGQA 372
           +N     G + L +A
Sbjct: 584 NNFFGKFGQVALTEA 598



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 122/281 (43%), Gaps = 19/281 (6%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           K+L  + +  NG  + G+  L  A   +K K+  L++ +N IT +G++ +   + +  SL
Sbjct: 347 KSLRELHLHGNGFVNEGLRVLMSALSSHKGKITVLDIGNNNITSEGSLYVADFIKRTKSL 406

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             L+L    +   GA  +A  L  N T+  ++   N I  +G   + + +K    L  + 
Sbjct: 407 RWLSLYMNDVGDEGAEKVADALKQNQTISTMDFGGNNIHSRGVTAIAETLKENAVLTTLE 466

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           +S N  G EGV+ +  ++K  G    L L    G C    Q   S  E  +D    N+ L
Sbjct: 467 LSYNPIGPEGVKALCDVLKFDGKLQTLKL----GWC----QIGVSGAEFIADCLKCNTTL 518

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
           S  D   ++   +       +S  T N+S         L  LDL  N     G   LA  
Sbjct: 519 STLDL-RANGLGDDGAICLARSLKTINES---------LKSLDLGFNEIRDDGAFALAQA 568

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L+++   A+  L L NN  G  G   L++A    YE S+KE
Sbjct: 569 LKANEDLAITSLNLANNFFGKFGQVALTEARDHVYEMSEKE 609



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ +T+  ++   N I+  G+TA+++  +EN  L  L L+ N I  +G   L   
Sbjct: 424 VADALKQNQTISTMDFGGNNIHSRGVTAIAETLKENAVLTTLELSYNPIGPEGVKALCDV 483

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN- 120
           L     L  L LG C +  +GA  IA  L  NTTL  ++L  N +   G + L +++K  
Sbjct: 484 LKFDGKLQTLKLGWCQIGVSGAEFIADCLKCNTTLSTLDLRANGLGDDGAICLARSLKTI 543

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
              LK +++  N+  ++G   + + +K+
Sbjct: 544 NESLKSLDLGFNEIRDDGAFALAQALKA 571



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 81/365 (22%), Positives = 152/365 (41%), Gaps = 40/365 (10%)

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           +L +  K    LK +N++  QFG+EG+         F +A +L         S EE D  
Sbjct: 170 NLNRFYKELRTLKNVNMAGRQFGDEGL---------FFLAESLAYNK-----SAEEVDFS 215

Query: 173 SEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDL 232
                    E  +  L  N +  + N S  +  +      +       L     + +L L
Sbjct: 216 GNAITAVGIEAFDGILQINTALKTLNLSGNAIGDEGAKCLSG-----ILVENVGIQKLLL 270

Query: 233 SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL--HDCYES---SK 287
           +    G  G + ++D+L+ +    +  ++L+NN +  +G   +++AL  ++   S   + 
Sbjct: 271 NSTNIGDEGAKAISDMLKKNKTIRI--VQLSNNVIEYSGFASIAEALLENNALRSLYLNG 328

Query: 288 KEGSPLALKVFIAG-------------RNRLENEGAKMLAAVFKKLK-TLERVEMPQNGI 333
             G PL       G              N   NEG ++L +     K  +  +++  N I
Sbjct: 329 NYGGPLGASSLAKGVVGNKSLRELHLHGNGFVNEGLRVLMSALSSHKGKITVLDIGNNNI 388

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G   ++D  +  K+LR L+L  N +  +GA  +  AL +  +++ ++ G   + S G
Sbjct: 389 TSEGSLYVADFIKRTKSLRWLSLYMNDVGDEGAEKVADALKQNQTISTMDFGGNNIHSRG 448

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            ++IA+ L +N  L  + L+ N I  +G   L   +K   KL+ + +   Q G  G E +
Sbjct: 449 VTAIAETLKENAVLTTLELSYNPIGPEGVKALCDVLKFDGKLQTLKLGWCQIGVSGAEFI 508

Query: 454 EKLMK 458
              +K
Sbjct: 509 ADCLK 513



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 74/193 (38%), Gaps = 35/193 (18%)

Query: 298 FIAGRN-------RLENEGAKMLAAVFKKLKTL--------------------------- 323
           F AG N       + E E  K L   +K+L+TL                           
Sbjct: 149 FAAGSNLSTSTSFKAEKESKKNLNRFYKELRTLKNVNMAGRQFGDEGLFFLAESLAYNKS 208

Query: 324 -ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
            E V+   N I  VGI A     + N  L+ LNL+ N I  +GA  L   L +   +  L
Sbjct: 209 AEEVDFSGNAITAVGIEAFDGILQINTALKTLNLSGNAIGDEGAKCLSGILVENVGIQKL 268

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
            L    +   GA +I+  L  N T+  V L+ N I   G   + +A+     L+ + ++ 
Sbjct: 269 LLNSTNIGDEGAKAISDMLKKNKTIRIVQLSNNVIEYSGFASIAEALLENNALRSLYLNG 328

Query: 443 NQFGEEGVEEMEK 455
           N  G  G   + K
Sbjct: 329 NYGGPLGASSLAK 341


>gi|6626184|gb|AAF19528.1|AF215731_1 Ran GTPase activating protein [Medicago sativa subsp. x varia]
          Length = 533

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 13/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           A L  L+LS+NA G  GV     LL+S     LEEL L N+G+     +  +KA+ +   
Sbjct: 214 AVLRYLNLSNNAMGEKGVRAFRALLKSQN--DLEELYLMNDGI----SEEAAKAVAELIP 267

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           S++K      LKV     N   +EGA  +A V K+   LE        +   G  AL++A
Sbjct: 268 STEK------LKVLHFHNNMTGDEGAFAIAEVVKRSPALEDFRCSSTRVGSEGGVALAEA 321

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
                +L+ L+L DN    +  + L + +     L  + L    L+  GA ++A  L ++
Sbjct: 322 LGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKES 381

Query: 405 T-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             +LE +++  N+I+ +  + + + + +K  L ++N+SEN+  +EG   + K ++  G
Sbjct: 382 APSLETLDMAGNDITAKATVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGRG 439



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL++A +E+   L  L++  N IT K  + + + +S    L  LNL +  LK  GA 
Sbjct: 370 GAEALANALKESAPSLETLDMAGNDITAKATVSVAECISSKQFLTKLNLSENELKDEGAG 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            I+K L     L +V+L+ N I+  G   L +A+  K   K +N++ N   +EG++E++ 
Sbjct: 430 LISKALEGRGQLSEVDLSTNLITWSGAKLLAEAVVQKPGFKLLNINANFISDEGIDELKD 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 16/293 (5%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +
Sbjct: 215 VLRYLNLSNNAMGEKGVRAFRALLKSQNDLEELYLMNDGISEEAAKAVAELIPSTEKLKV 274

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA+ +  +  LED   +   +  +GG+ L +A+   T LK++++ 
Sbjct: 275 LHFHNNMTGDEGAFAIAEVVKRSPALEDFRCSSTRVGSEGGVALAEALGACTHLKKLDLR 334

Query: 131 ENQFGEEGVEEMEKLMKSFG-----MAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
           +N FG E    + K++  F        + L LEDD  E       E +      D  G++
Sbjct: 335 DNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDDGAEALANALKESAPSLETLDMAGND 394

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGA-----RLVELDLSDNAFGPI 240
                  S     +S Q     N S N        L + A     +L E+DLS N     
Sbjct: 395 ITAKATVSVAECISSKQFLTKLNLSENELKDEGAGLISKALEGRGQLSEVDLSTNLITWS 454

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
           G + LA+ +     F L  L +N N +   G       L D +++S     PL
Sbjct: 455 GAKLLAEAVVQKPGFKL--LNINANFISDEGI----DELKDIFKNSPDMLGPL 501



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 7/180 (3%)

Query: 298 FIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           FIAGR   E  E   + ++  ++   L  + +  N +   G+ A     +   +L  L L
Sbjct: 191 FIAGRPEAEAIEVMNIFSSALER-AVLRYLNLSNNAMGEKGVRAFRALLKSQNDLEELYL 249

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
            ++ I+ + A  + + +     L +L+  + +    GA +IA+ +  +  LED   +   
Sbjct: 250 MNDGISEEAAKAVAELIPSTEKLKVLHFHNNMTGDEGAFAIAEVVKRSPALEDFRCSSTR 309

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG-----MAAALVLEDD 471
           +  +GG+ L +A+   T LK++++ +N FG E    + K++  F        + L LEDD
Sbjct: 310 VGSEGGVALAEALGACTHLKKLDLRDNMFGVEAGVALSKVIPVFADLTEIYLSYLNLEDD 369


>gi|405975326|gb|EKC39900.1| hypothetical protein CGI_10016632 [Crassostrea gigas]
          Length = 601

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 105/201 (52%), Gaps = 10/201 (4%)

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
           +E  +  +GLG  G K ++  L    +++KK       K+ + G N +E EG+  LA + 
Sbjct: 176 KEFSMKYHGLGPNGAKAIAWPL----KTNKK-----IEKINLEG-NWIEAEGSIYLAKML 225

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
           K    +  + + +N I + G  A+SD  ++N  +  L+L+ N+I   GA  L + L K  
Sbjct: 226 KNNIYVTELHLAENRIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNS 285

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
           S+  L L +   +   A  + + LT+N TLE V+L+ N +  +G + + + ++    L+ 
Sbjct: 286 SIKHLYLANNKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRI 345

Query: 438 INVSENQFGEEGVEEMEKLMK 458
           +N++ N F ++G E M K +K
Sbjct: 346 LNLAMNGFAQDGSEAMGKALK 366



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 12/221 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           E  +  +  GP G + +A  L+++    +E++ L  N +   G   L+K L +       
Sbjct: 177 EFSMKYHGLGPNGAKAIAWPLKTNK--KIEKINLEGNWIEAEGSIYLAKMLKNN------ 228

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
               + +       NR+ NEGA+ ++ + +K   +  +++  N I   G   L     +N
Sbjct: 229 ----IYVTELHLAENRIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKN 284

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
            +++HL L +N    + A  L + L+   +L  ++L    L++ GA +IA+ + +N  L 
Sbjct: 285 SSIKHLYLANNKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLR 344

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            +NL  N  +  G   + KA+KN   L ++++S N+  E G
Sbjct: 345 ILNLAMNGFAQDGSEAMGKALKNNRTLLELDLSHNRIPEAG 385



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 78/146 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + K    +  + + +N I + G  A+SD  ++N  +  L+L+ N+I   GA  L + 
Sbjct: 221 LAKMLKNNIYVTELHLAENRIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRV 280

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L K  S+  L L +   +   A  + + LT+N TLE V+L+ N +  +G + + + ++  
Sbjct: 281 LLKNSSIKHLYLANNKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQEN 340

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L+ +N++ N F ++G E M K +K
Sbjct: 341 YGLRILNLAMNGFAQDGSEAMGKALK 366



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 12/251 (4%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
             LKT  ++ +++L  N     G   LA +L+++      EL L  N +G  G + +S  
Sbjct: 195 WPLKTNKKIEKINLEGNWIEAEGSIYLAKMLKNNIYVT--ELHLAENRIGNEGAEAISDM 252

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L         + + +   + ++G N +E+ GA+ L  V  K  +++ + +  N       
Sbjct: 253 L---------QKNDMIYSLDLSG-NSIEDYGAEKLCRVLLKNSSIKHLYLANNKFEERAA 302

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             L +    N+ L  ++L+ N +  +GAI + + + +   L ILNL        G+ ++ 
Sbjct: 303 GWLREVLTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFAQDGSEAMG 362

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           K L +N TL +++L+ N I   G   + + +++   LK + V+ N  G EG  E+  ++ 
Sbjct: 363 KALKNNRTLLELDLSHNRIPEAGATAISQGLQHNDTLKVLRVASNPLGGEGPLELLNVIA 422

Query: 459 SFGMAAALVLE 469
              M+   VL+
Sbjct: 423 KNDMSEIRVLD 433



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 75/157 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  V  K  +++H+ +  N         L +    N+ L  ++L+ N +  +GAI + + 
Sbjct: 277 LCRVLLKNSSIKHLYLANNKFEERAAGWLREVLTNNETLETVDLSWNHLRTRGAIAIAEG 336

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + +   L ILNL        G+ ++ K L +N TL +++L+ N I   G   + + +++ 
Sbjct: 337 VQENYGLRILNLAMNGFAQDGSEAMGKALKNNRTLLELDLSHNRIPEAGATAISQGLQHN 396

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             LK + V+ N  G EG  E+  ++    M+   VL+
Sbjct: 397 DTLKVLRVASNPLGGEGPLELLNVIAKNDMSEIRVLD 433



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 68/137 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ + +K   +  +++  N I   G   L     +N  ++HL L +N    + A  L + 
Sbjct: 249 ISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNSSIKHLYLANNKFEERAAGWLREV 308

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+   +L  ++L    L++ GA +IA+ + +N  L  +NL  N  +  G   + KA+KN 
Sbjct: 309 LTNNETLETVDLSWNHLRTRGAIAIAEGVQENYGLRILNLAMNGFAQDGSEAMGKALKNN 368

Query: 122 TKLKQINVSENQFGEEG 138
             L ++++S N+  E G
Sbjct: 369 RTLLELDLSHNRIPEAG 385



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 5/140 (3%)

Query: 12  LEHVE-----MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           L H++     M  +G+   G  A++   + NKK+  +NL  N I  +G+I L + L    
Sbjct: 170 LNHIQEKEFSMKYHGLGPNGAKAIAWPLKTNKKIEKINLEGNWIEAEGSIYLAKMLKNNI 229

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            +  L+L +  + + GA +I+  L  N  +  ++L+ N I   G   L + +   + +K 
Sbjct: 230 YVTELHLAENRIGNEGAEAISDMLQKNDMIYSLDLSGNSIEDYGAEKLCRVLLKNSSIKH 289

Query: 127 INVSENQFGEEGVEEMEKLM 146
           + ++ N+F E     + +++
Sbjct: 290 LYLANNKFEERAAGWLREVL 309



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 128/308 (41%), Gaps = 33/308 (10%)

Query: 87  AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
           A Y  ++   ++ ++  + +   G   +   +K   K+++IN+  N    EG   + K++
Sbjct: 166 ASYFLNHIQEKEFSMKYHGLGPNGAKAIAWPLKTNKKIEKINLEGNWIEAEGSIYLAKML 225

Query: 147 KSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNN 206
           K+      L L   E    +E             AE  +  L  ND  +S + S     N
Sbjct: 226 KNNIYVTELHLA--ENRIGNE------------GAEAISDMLQKNDMIYSLDLS----GN 267

Query: 207 SNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNG 266
           S + +       + LK  + +  L L++N F       L ++L ++    LE + L+ N 
Sbjct: 268 SIEDYGAEKLCRVLLKNSS-IKHLYLANNKFEERAAGWLREVLTNNET--LETVDLSWNH 324

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           L   G   +++ + + Y           L++     N    +G++ +    K  +TL  +
Sbjct: 325 LRTRGAIAIAEGVQENY----------GLRILNLAMNGFAQDGSEAMGKALKNNRTLLEL 374

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK--LPSLAILNL 384
           ++  N I   G TA+S   + N  L+ L +  N +  +G + L   ++K  +  + +L+L
Sbjct: 375 DLSHNRIPEAGATAISQGLQHNDTLKVLRVASNPLGGEGPLELLNVIAKNDMSEIRVLDL 434

Query: 385 GDCLLKSA 392
            D L+  A
Sbjct: 435 TDVLVTPA 442


>gi|320170816|gb|EFW47715.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 518

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 41/232 (17%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L +L L DN  G  G   +A+ ++ SC +   EL L  N +G  G + +++ L      
Sbjct: 78  KLQKLSLYDNRIGDAGARAIAEAIKGSCVW---ELNLQKNQIGDAGAQAIAETL------ 128

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                                +E ++++     K           N I  VG TA+++A 
Sbjct: 129 ---------------------DENSRLMTLTLWK-----------NRIGDVGATAIAEAL 156

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
           +EN  L  L L +N I   GA  +G+AL     L  LNL    +  AGA +I + L  NT
Sbjct: 157 KENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHAGAQAIGEALKVNT 216

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            L  + L  N I   G   + +A+K  + ++++++S  Q G+ G   + + M
Sbjct: 217 CLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAGALALAERM 268



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 1/156 (0%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NR+ + GA+ +A   K     E + + +N I   G  A+++  +EN  L  L L  N I 
Sbjct: 87  NRIGDAGARAIAEAIKGSCVWE-LNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKNRIG 145

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL +  +L  L LG+  +  AGA +I + L  N+ L  +NL  N+I   G 
Sbjct: 146 DVGATAIAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHAGA 205

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A+K  T L ++ +  N+ G+ G + + + +K
Sbjct: 206 QAIGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALK 241



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+  TL  +++ +N I   G  A+ +A + N  L  LNL  N I + GA  +G+A
Sbjct: 152 IAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQIGHAGAQAIGEA 211

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L+ L L    +  AGA +IA+ L  N+++++++L+  +I   G L L + M + 
Sbjct: 212 LKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAGALALAERMVH- 270

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
           ++L ++++  N+ G+ G + + K +K       L L
Sbjct: 271 SELAELDLGYNRIGDVGAQAIAKAIKDGATLTGLYL 306



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 67/128 (52%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           +N I  VG TA+++A +EN  L  L L +N I   GA  +G+AL     L  LNL    +
Sbjct: 141 KNRIGDVGATAIAEALKENTTLCSLKLGENQIGDAGAQAIGEALKVNSDLTRLNLQQNQI 200

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             AGA +I + L  NT L  + L  N I   G   + +A+K  + ++++++S  Q G+ G
Sbjct: 201 GHAGAQAIGEALKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAG 260

Query: 139 VEEMEKLM 146
              + + M
Sbjct: 261 ALALAERM 268



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 54/284 (19%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           +N I   G  A+++  +EN +L  L L  N I   GA  + +AL +  +L  L LG+  +
Sbjct: 113 KNQIGDAGAQAIAETLDENSRLMTLTLWKNRIGDVGATAIAEALKENTTLCSLKLGENQI 172

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             AGA +I + L  N+ L  +NL  N+I   G   + +A+K  T L ++ +  N+ G+ G
Sbjct: 173 GDAGAQAIGEALKVNSDLTRLNLQQNQIGHAGAQAIGEALKVNTCLSKLTLYGNRIGDAG 232

Query: 139 VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHN 198
            + + + +K                 S +E D  S +  D+ A      + H++      
Sbjct: 233 AQAIAEALKV--------------NSSIQELDLSSTQIGDAGALALAERMVHSE------ 272

Query: 199 ASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALE 258
                                       L ELDL  N  G +G + +A  ++      L 
Sbjct: 273 ----------------------------LAELDLGYNRIGDVGAQAIAKAIKDGAT--LT 302

Query: 259 ELKLNNNGLGITGCKLLSKA--LHDC--YESSKKEGSPLALKVF 298
            L L++N +G     L+++A  + D   Y +   + +PLA  + 
Sbjct: 303 GLYLSHNCIGDAAVDLITEAQEIEDMPPYLTVDPQINPLAFSLL 346



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 62/346 (17%)

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           A A +IA+ L  NTT+  + L  N+I   G + +  A     KL+++++ +N+ G+ G  
Sbjct: 36  AEAQAIAEGLKVNTTVHTLGLYDNQIGDAGAIAIAGAFAANPKLQKLSLYDNRIGDAGAR 95

Query: 141 EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS 200
            + + +K              G C   E + +  +  D+ A+     L  N         
Sbjct: 96  AIAEAIK--------------GSCV-WELNLQKNQIGDAGAQAIAETLDEN--------- 131

Query: 201 NQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEEL 260
                                   +RL+ L L  N  G +G   +A+ L+ +       L
Sbjct: 132 ------------------------SRLMTLTLWKNRIGDVGATAIAEALKENTTLC--SL 165

Query: 261 KLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
           KL  N +G  G + + +AL    + ++     L L+     +N++ + GA+ +    K  
Sbjct: 166 KLGENQIGDAGAQAIGEALKVNSDLTR-----LNLQ-----QNQIGHAGAQAIGEALKVN 215

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
             L ++ +  N I   G  A+++A + N +++ L+L+   I   GA+ L + +     LA
Sbjct: 216 TCLSKLTLYGNRIGDAGAQAIAEALKVNSSIQELDLSSTQIGDAGALALAERMVH-SELA 274

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
            L+LG   +   GA +IAK + D  TL  + L+ N I     +DL+
Sbjct: 275 ELDLGYNRIGDVGAQAIAKAIKDGATLTGLYLSHNCIG-DAAVDLI 319



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 157/368 (42%), Gaps = 48/368 (13%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++  + N  +  L L DN I   GAI +  A +  P L  L+L D  +  AGA +IA+
Sbjct: 40  AIAEGLKVNTTVHTLGLYDNQIGDAGAIAIAGAFAANPKLQKLSLYDNRIGDAGARAIAE 99

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            +  +   E +NL  N+I   G   + + +   ++L  + + +N+ G+ G   + + +K 
Sbjct: 100 AIKGSCVWE-LNLQKNQIGDAGAQAIAETLDENSRLMTLTLWKNRIGDVGATAIAEALKE 158

Query: 149 FGMAAALVL-EDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNS 207
                +L L E+  G+   +   E  +  +D        NL  N   H   A  Q+    
Sbjct: 159 NTTLCSLKLGENQIGDAGAQAIGEALKVNSDL----TRLNLQQNQIGH---AGAQAIGE- 210

Query: 208 NQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGL 267
                       +LK    L +L L  N  G  G + +A+ L+ +   +++EL L++  +
Sbjct: 211 ------------ALKVNTCLSKLTLYGNRIGDAGAQAIAEALKVNS--SIQELDLSSTQI 256

Query: 268 GITGCKLLS-KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           G  G   L+ + +H        E + L L     G NR+ + GA+ +A   K   TL  +
Sbjct: 257 GDAGALALAERMVH-------SELAELDL-----GYNRIGDVGAQAIAKAIKDGATLTGL 304

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI---LN 383
            +  N I    +  +++A E      +L + D  I      PL  A S LP LA    L 
Sbjct: 305 YLSHNCIGDAAVDLITEAQEIEDMPPYLTV-DPQIN-----PL--AFSLLPRLATADDLQ 356

Query: 384 LGDCLLKS 391
              CLL S
Sbjct: 357 TVLCLLTS 364


>gi|401415564|ref|XP_003872277.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|322488501|emb|CBZ23747.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 739

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 173/419 (41%), Gaps = 46/419 (10%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
           K R   L +N      A  LG  LS+    ++L+L    L+  GA  IA+ +  N TL  
Sbjct: 147 KGRFFCLPENGFGVCSAEALGAVLSRNSHYSVLDLSGNCLRDNGARFIAQLIKRNRTLVH 206

Query: 99  VNLTCNEISVQGGLDLVKAM-KNKTKLK-----QINVSENQFGEEGVEEMEKLMKSFGMA 152
           +++  N+I   GG+ + +A+ +N T +      +  V+ N  G  G E + +L++S  + 
Sbjct: 207 IDVASNDIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEALGELLRSNEVL 266

Query: 153 AALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN 212
           A L +                   N   A G     S  + N S    N S NN    H 
Sbjct: 267 ARLNVSS-----------------NGLGAGGVAFIGSALERNGSLTRLNLSSNN--LGHE 307

Query: 213 TSNQSHMSLKTGARLVELDLSDNAF----GPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
            +     +L+  AR+   +L  N      G   +  LA  +R+     +E L L+NN LG
Sbjct: 308 GARVLASALE-AARVTHWELQRNHLDDKGGACFLNALAGAIRNGNDV-VEYLDLDNNVLG 365

Query: 269 ITGCKLLSKALH--DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
                 + K L       + +  G+PL               G K ++    +  +L  +
Sbjct: 366 EGSADAVGKVLSVSASLTTLRLSGNPLG-------------AGVKAISTGLNENHSLSSL 412

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
            + +  I H+G  AL      N  LRHL++++N +   GA+ L + L+    L   NL  
Sbjct: 413 HLSKCSIDHIGAAALGPVLCVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSS 472

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
             +  AG   +AK +  N TL  +NL  N +    G  +  + +    L++++V+ N F
Sbjct: 473 NRIGHAGGVEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRTNNTLERLDVAYNNF 531



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 193/468 (41%), Gaps = 53/468 (11%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           +P+NG       AL      N     L+L+ N +   GA  + Q + +  +L  +++   
Sbjct: 153 LPENGFGVCSAEALGAVLSRNSHYSVLDLSGNCLRDNGARFIAQLIKRNRTLVHIDVASN 212

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTC------NEISVQGGLDLVKAMKNKTKLKQINVS 130
            +   G   IA+ L +N T+  +++        N I   G   L + +++   L ++NVS
Sbjct: 213 DIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEALGELLRSNEVLARLNVS 272

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N  G  GV  +   ++  G    L L                   N+   EG     S 
Sbjct: 273 SNGLGAGGVAFIGSALERNGSLTRLNLSS-----------------NNLGHEGARVLASA 315

Query: 191 NDSNH-SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVE-LDLSDNAFGPIGVEGLADL 248
            ++   +H    ++H +        N    +++ G  +VE LDL +N  G    + +  +
Sbjct: 316 LEAARVTHWELQRNHLDDKGGACFLNALAGAIRNGNDVVEYLDLDNNVLGEGSADAVGKV 375

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L  S   +L  L+L+ N LG  G K +S  L++ +  S    S  +          +++ 
Sbjct: 376 L--SVSASLTTLRLSGNPLG-AGVKAISTGLNENHSLSSLHLSKCS----------IDHI 422

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA  L  V     TL  ++M  N +   G   L+     NK L   NL+ N I + G + 
Sbjct: 423 GAAALGPVLCVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTTWNLSSNRIGHAGGVE 482

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +A+ K  +L  LNL   L+  A   +I+     N TLE +++  N  S    + + +A
Sbjct: 483 MAKAVQKNRTLRHLNLRRNLMLEATGEAISDSFRTNNTLERLDVAYNNFSYVCAMSIERA 542

Query: 429 MK-----NKTKLK---QINV-----SENQF--GEEGVEEMEKLMKSFG 461
           ++     NKT L    Q N+      EN+    EE +E  +++++  G
Sbjct: 543 LERNRASNKTLLIPKLQANIDALAPKENELERAEEDIEVEKRMVRDRG 590



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 159/390 (40%), Gaps = 52/390 (13%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNL------NDNTITYKG 54
            +A + K+ +TL H+++  N I HVG   ++ A  EN  +  L++      N N I   G
Sbjct: 193 FIAQLIKRNRTLVHIDVASNDIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPG 252

Query: 55  AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
           A  LG+ L     LA LN+    L + G + I   L  N +L  +NL+ N +  +G   L
Sbjct: 253 AEALGELLRSNEVLARLNVSSNGLGAGGVAFIGSALERNGSLTRLNLSSNNLGHEGARVL 312

Query: 115 VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF--GMAAALVLEDDEGECSDEEQDEE 172
             A++   ++    +  N   ++G          F   +A A+   +D  E  D   D  
Sbjct: 313 ASALE-AARVTHWELQRNHLDDKG-------GACFLNALAGAIRNGNDVVEYLD--LDNN 362

Query: 173 SEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGA----RLV 228
              E  +DA G   ++S             S      S N       ++ TG      L 
Sbjct: 363 VLGEGSADAVGKVLSVS------------ASLTTLRLSGNPLGAGVKAISTGLNENHSLS 410

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCC-FALEELKLNNNGLGITGCKLLSK--ALHDCYES 285
            L LS  +   IG   L  +L   C    L  L ++NN +   G   L+K  A++ C   
Sbjct: 411 SLHLSKCSIDHIGAAALGPVL---CVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKC--- 464

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                    L  +    NR+ + G   +A   +K +TL  + + +N +      A+SD+F
Sbjct: 465 ---------LTTWNLSSNRIGHAGGVEMAKAVQKNRTLRHLNLRRNLMLEATGEAISDSF 515

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSK 375
             N  L  L++  N  +Y  A+ + +AL +
Sbjct: 516 RTNNTLERLDVAYNNFSYVCAMSIERALER 545


>gi|320165055|gb|EFW41954.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 426

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 12/230 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           +LDL DN  G    + +A+ L+ +    L ++ L  N +G  G + +++AL         
Sbjct: 24  QLDLDDNQIGVAEAQAIAEALKVNTT--LIKISLQENQIGDAGAQAIAEALR-------- 73

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             +   LK  +   N++ + GA+ +A   K   TL  + + +N I   G  A+++A + N
Sbjct: 74  --ANTTLKELLLHLNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKAN 131

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L +++L  N I   GA  + +AL    ++ +L+L    +   GA +IA+ L  N TL 
Sbjct: 132 ATLSYVHLKHNQIGDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAEALKVNKTLI 191

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            ++L  N+I   G   + +A+K  T L  + +S N FG  G + +++  K
Sbjct: 192 RISLDGNQIGDAGAQAIAEALKVNTTLTLLFLSRNCFGVFGSQAIDEACK 241



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 24/223 (10%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L+++ L +N  G  G + +A+ LR++    L+EL L+ N +G  G + +++AL
Sbjct: 43  ALKVNTTLIKISLQENQIGDAGAQAIAEALRANTT--LKELLLHLNQIGDAGAQAIAEAL 100

Query: 280 H------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
                  D Y                   N++ + GA+ +A   K   TL  V +  N I
Sbjct: 101 KVNNTLTDLYLDE----------------NQIGDGGAQAIAEALKANATLSYVHLKHNQI 144

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G  A+++A   N  +  L+L  N I   GA  + +AL    +L  ++L    +  AG
Sbjct: 145 GDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAEALKVNKTLIRISLDGNQIGDAG 204

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
           A +IA+ L  NTTL  + L+ N   V G   + +A K K+  +
Sbjct: 205 AQAIAEALKVNTTLTLLFLSRNCFGVFGSQAIDEACKGKSGFQ 247



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 74/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + +N I   G  A+++A + N  L +++L  N I   GA  + +A
Sbjct: 96  IAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQIGDGGAWAIAEA 155

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++ +L+L    +   GA +IA+ L  N TL  ++L  N+I   G   + +A+K  
Sbjct: 156 LRVNSTVTVLSLRHNQIGDGGAWAIAEALKVNKTLIRISLDGNQIGDAGAQAIAEALKVN 215

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  + +S N FG  G + +++  K
Sbjct: 216 TTLTLLFLSRNCFGVFGSQAIDEACK 241



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 76/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   +   TL+ + +  N I   G  A+++A + N  L  L L++N I   GA  + +A
Sbjct: 68  IAEALRANTTLKELLLHLNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEA 127

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+ ++L    +   GA +IA+ L  N+T+  ++L  N+I   G   + +A+K  
Sbjct: 128 LKANATLSYVHLKHNQIGDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAEALKVN 187

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L +I++  NQ G+ G + + + +K
Sbjct: 188 KTLIRISLDGNQIGDAGAQAIAEALK 213



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + +N I   G  A+++A   N  L+ L L+ N I   GA  + +A
Sbjct: 40  IAEALKVNTTLIKISLQENQIGDAGAQAIAEALRANTTLKELLLHLNQIGDAGAQAIAEA 99

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +   GA +IA+ L  N TL  V+L  N+I   G   + +A++  
Sbjct: 100 LKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQIGDGGAWAIAEALRVN 159

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + +  +++  NQ G+ G   + + +K
Sbjct: 160 STVTVLSLRHNQIGDGGAWAIAEALK 185



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 27/240 (11%)

Query: 42  HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
            L+L+DN I    A  + +AL    +L  ++L +  +  AGA +IA+ L  NTTL+++ L
Sbjct: 24  QLDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQIGDAGAQAIAEALRANTTLKELLL 83

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             N+I   G   + +A+K    L  + + ENQ G+ G + + + +K+    + + L+ ++
Sbjct: 84  HLNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQ 143

Query: 162 GECSDEEQDEESEEENDSDAEGDNSNLSHNDS---NHSHNASNQSHNNSNQSHNTSNQSH 218
                                GD    +  ++   N +    +  HN        +    
Sbjct: 144 --------------------IGDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAE- 182

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            +LK    L+ + L  N  G  G + +A+ L+ +    L  L L+ N  G+ G + + +A
Sbjct: 183 -ALKVNKTLIRISLDGNQIGDAGAQAIAEALKVNTTLTL--LFLSRNCFGVFGSQAIDEA 239



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%)

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
            L+L+DN I    A  + +AL    +L  ++L +  +  AGA +IA+ L  NTTL+++ L
Sbjct: 24  QLDLDDNQIGVAEAQAIAEALKVNTTLIKISLQENQIGDAGAQAIAEALRANTTLKELLL 83

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             N+I   G   + +A+K    L  + + ENQ G+ G + + + +K+
Sbjct: 84  HLNQIGDAGAQAIAEALKVNNTLTDLYLDENQIGDGGAQAIAEALKA 130



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + N  L  ++L +N I   GA  + +AL    +L  L L    +  AGA +IA+
Sbjct: 39  AIAEALKVNTTLIKISLQENQIGDAGAQAIAEALRANTTLKELLLHLNQIGDAGAQAIAE 98

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            L  N TL D+ L  N+I   G   + +A+K    L  +++  NQ G+ G   + + ++
Sbjct: 99  ALKVNNTLTDLYLDENQIGDGGAQAIAEALKANATLSYVHLKHNQIGDGGAWAIAEALR 157



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL +V +  N I   G  A+++A   N  +  L+L  N I   GA  + +A
Sbjct: 124 IAEALKANATLSYVHLKHNQIGDGGAWAIAEALRVNSTVTVLSLRHNQIGDGGAWAIAEA 183

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  ++L    +  AGA +IA+ L  NTTL  + L+ N   V G   + +A K K
Sbjct: 184 LKVNKTLIRISLDGNQIGDAGAQAIAEALKVNTTLTLLFLSRNCFGVFGSQAIDEACKGK 243

Query: 122 TKLK 125
           +  +
Sbjct: 244 SGFQ 247


>gi|318037469|ref|NP_001186996.1| nucleotide-binding oligomerization domain-containing protein 1
           [Ictalurus punctatus]
 gi|222137284|gb|ACM45224.1| NOD1 receptor [Ictalurus punctatus]
          Length = 946

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 88/164 (53%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           +KV    +N + + GAK++A +  +   L  V++  N I  VG T L++A  ++K++  +
Sbjct: 751 VKVLGLYKNHITDVGAKLVAQIIDECPPLRTVKLGYNYITAVGATFLAEAIRKSKSIFDV 810

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            +  N+I   GA    +A+    SL  L+L    + S G +S+A+ LT N++L    L  
Sbjct: 811 GMWGNSIGDDGAHAFAEAIKNHSSLTNLSLSANGITSEGGTSLARALTLNSSLHIFWLIQ 870

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N IS    ++L KA +  + L  + + +NQF   GV+++ + +K
Sbjct: 871 NNISDDAAVELAKAFQKNSALTHLMLIDNQFSARGVDQLTEGLK 914



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 10/189 (5%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L  N +   G KL+++ + +C         P  L+    G N +   GA  LA   +K
Sbjct: 754 LGLYKNHITDVGAKLVAQIIDEC---------P-PLRTVKLGYNYITAVGATFLAEAIRK 803

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            K++  V M  N I   G  A ++A + + +L +L+L+ N IT +G   L +AL+   SL
Sbjct: 804 SKSIFDVGMWGNSIGDDGAHAFAEAIKNHSSLTNLSLSANGITSEGGTSLARALTLNSSL 863

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            I  L    +    A  +AK    N+ L  + L  N+ S +G   L + +K+ T +K++N
Sbjct: 864 HIFWLIQNNISDDAAVELAKAFQKNSALTHLMLIDNQFSARGVDQLTEGLKHNTTIKEVN 923

Query: 440 VSENQFGEE 448
           +  NQ   E
Sbjct: 924 LKGNQISAE 932



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 77/147 (52%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A +  +   L  V++  N I  VG T L++A  ++K +  + +  N+I   GA    +
Sbjct: 768 LVAQIIDECPPLRTVKLGYNYITAVGATFLAEAIRKSKSIFDVGMWGNSIGDDGAHAFAE 827

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A+    SL  L+L    + S G +S+A+ LT N++L    L  N IS    ++L KA + 
Sbjct: 828 AIKNHSSLTNLSLSANGITSEGGTSLARALTLNSSLHIFWLIQNNISDDAAVELAKAFQK 887

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
            + L  + + +NQF   GV+++ + +K
Sbjct: 888 NSALTHLMLIDNQFSARGVDQLTEGLK 914



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 86/170 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N+L +   ++LAA   K K ++ + + +N I  VG   ++   +E   LR + L  N IT
Sbjct: 731 NQLTDSSVEVLAAELIKQKIVKVLGLYKNHITDVGAKLVAQIIDECPPLRTVKLGYNYIT 790

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  L +A+ K  S+  + +    +   GA + A+ + ++++L +++L+ N I+ +GG
Sbjct: 791 AVGATFLAEAIRKSKSIFDVGMWGNSIGDDGAHAFAEAIKNHSSLTNLSLSANGITSEGG 850

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             L +A+   + L    + +N   ++   E+ K  +       L+L D++
Sbjct: 851 TSLARALTLNSSLHIFWLIQNNISDDAAVELAKAFQKNSALTHLMLIDNQ 900



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            LA   +K K++  V M  N I   G  A ++A + +  L +L+L+ N IT +G   L +
Sbjct: 796 FLAEAIRKSKSIFDVGMWGNSIGDDGAHAFAEAIKNHSSLTNLSLSANGITSEGGTSLAR 855

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL+   SL I  L    +    A  +AK    N+ L  + L  N+ S +G   L + +K+
Sbjct: 856 ALTLNSSLHIFWLIQNNISDDAAVELAKAFQKNSALTHLMLIDNQFSARGVDQLTEGLKH 915

Query: 121 KTKLKQINVSENQFGEE 137
            T +K++N+  NQ   E
Sbjct: 916 NTTIKEVNLKGNQISAE 932



 Score = 46.6 bits (109), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 3/137 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  +F KL     V    N +    +  L+    + K ++ L L  N IT  GA  + Q 
Sbjct: 716 LIPLFSKLTV---VRFCVNQLTDSSVEVLAAELIKQKIVKVLGLYKNHITDVGAKLVAQI 772

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P L  + LG   + + GA+ +A+ +  + ++ DV +  N I   G     +A+KN 
Sbjct: 773 IDECPPLRTVKLGYNYITAVGATFLAEAIRKSKSIFDVGMWGNSIGDDGAHAFAEAIKNH 832

Query: 122 TKLKQINVSENQFGEEG 138
           + L  +++S N    EG
Sbjct: 833 SSLTNLSLSANGITSEG 849


>gi|320165465|gb|EFW42364.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 348

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 81/156 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N+L + GA  +A V K   TL+ + + +N I   G  A+++A E N  +  L+LN+N I 
Sbjct: 16  NKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIG 75

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  +  AL    +L  L L    +      +IA+ L  NTTL ++ L  N+I+  G 
Sbjct: 76  EAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQITCTGA 135

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             L +A+K  T L ++++  NQ G+ G   + + +K
Sbjct: 136 QALAEALKANTTLTELDMGSNQIGDVGARAIAEALK 171



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 75/146 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K   TL+ + + +N I   G  A+++A E N  +  L+LN+N I   GA  +  A
Sbjct: 26  IAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIGEAGAQAIADA 85

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    +      +IA+ L  NTTL ++ L  N+I+  G   L +A+K  
Sbjct: 86  LKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQITCTGAQALAEALKAN 145

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L ++++  NQ G+ G   + + +K
Sbjct: 146 TTLTELDMGSNQIGDVGARAIAEALK 171



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 40/229 (17%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L L +N  G  G   +A++L+ +    L+ L L  N +G  G + +++AL       
Sbjct: 8   LFTLCLHNNKLGDAGATAIAEVLKVNTT--LKALGLAKNQIGEAGAQAIAEALE-----V 60

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
               + L+L       NR+   GA+ +A   K   TL  + + +N I  V + A+++A E
Sbjct: 61  NTTMTSLSLN-----ENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALE 115

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N  L  L L +N IT                        C     GA ++A+ L  NTT
Sbjct: 116 VNTTLTELYLWENQIT------------------------C----TGAQALAEALKANTT 147

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           L ++++  N+I   G   + +A+K    L ++ + EN    +GV    +
Sbjct: 148 LTELDMGSNQIGDVGARAIAEALKVNETLTELLLYENFLTTDGVATFRQ 196



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 65/129 (50%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N +   G TA+++  + N  L+ L L  N I   GA  + +AL    ++  L+L +  + 
Sbjct: 16  NKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIG 75

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            AGA +IA  L  NTTL D+ L  N I       + +A++  T L ++ + ENQ    G 
Sbjct: 76  EAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQITCTGA 135

Query: 451 EEMEKLMKS 459
           + + + +K+
Sbjct: 136 QALAEALKA 144



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 65/129 (50%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N +   G TA+++  + N  L+ L L  N I   GA  + +AL    ++  L+L +  + 
Sbjct: 16  NKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIG 75

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            AGA +IA  L  NTTL D+ L  N I       + +A++  T L ++ + ENQ    G 
Sbjct: 76  EAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWENQITCTGA 135

Query: 140 EEMEKLMKS 148
           + + + +K+
Sbjct: 136 QALAEALKA 144



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 28/228 (12%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           L  AGA++IA+ L  NTTL+ + L  N+I   G   + +A++  T +  ++++EN+ GE 
Sbjct: 18  LGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSLSLNENRIGEA 77

Query: 138 GVEEMEKLMKSFGMAAALVLEDDE-GECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHS 196
           G + +   +K       LVL  +  G+ + +   E  E          N+ L+       
Sbjct: 78  GAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEV---------NTTLT------- 121

Query: 197 HNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
                + +   NQ   T  Q+   +LK    L ELD+  N  G +G   +A+ L+ +   
Sbjct: 122 -----ELYLWENQITCTGAQALAEALKANTTLTELDMGSNQIGDVGARAIAEALKVNET- 175

Query: 256 ALEELKLNNNGL---GITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            L EL L  N L   G+   +    A+ + Y   ++  S + L    A
Sbjct: 176 -LTELLLYENFLTTDGVATFRQTGNAICELYLDDQRAPSNVELAQIFA 222



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  + + +N I   G  A++DA + N  L  L L  N I       + +AL    +L  
Sbjct: 63  TMTSLSLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTE 122

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L +  +   GA ++A+ L  NTTL ++++  N+I   G   + +A+K    L ++ + 
Sbjct: 123 LYLWENQITCTGAQALAEALKANTTLTELDMGSNQIGDVGARAIAEALKVNETLTELLLY 182

Query: 131 ENQFGEEGVEEMEK 144
           EN    +GV    +
Sbjct: 183 ENFLTTDGVATFRQ 196



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 69/145 (47%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L  L L++N +   GA  + + L    +L  L L    +  AGA +IA+ L  NTT+  +
Sbjct: 8   LFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTSL 67

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           +L  N I   G   +  A+K  T L  + +++N  G+  V+ + + ++       L L +
Sbjct: 68  SLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALEVNTTLTELYLWE 127

Query: 160 DEGECSDEEQDEESEEENDSDAEGD 184
           ++  C+  +   E+ + N +  E D
Sbjct: 128 NQITCTGAQALAEALKANTTLTELD 152



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 55/109 (50%)

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
           NL  L L++N +   GA  + + L    +L  L L    +  AGA +IA+ L  NTT+  
Sbjct: 7   NLFTLCLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALEVNTTMTS 66

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           ++L  N I   G   +  A+K  T L  + +++N  G+  V+ + + ++
Sbjct: 67  LSLNENRIGEAGAQAIADALKVNTTLTDLVLAKNPIGDVAVQAIAEALE 115


>gi|389594235|ref|XP_003722364.1| ribonuclease inhibitor-like protein [Leishmania major strain
           Friedlin]
 gi|321438862|emb|CBZ12622.1| ribonuclease inhibitor-like protein [Leishmania major strain
           Friedlin]
          Length = 738

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 183/426 (42%), Gaps = 33/426 (7%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
           K R   L +N      A  L   LS+    ++L+L    L+  GA  IA  +  N TL  
Sbjct: 147 KGRFFCLPENGFGVCSAEALAAVLSRNSHYSVLDLSGNRLRDDGARFIAHLIKRNRTLVH 206

Query: 99  VNLTCNEISVQGGLDLVKA-MKNKTKLK-----QINVSENQFGEEGVEEMEKLMKSFGMA 152
           +++  N+I   GG+ + +A ++N T +      +  V+ N  G  G E + ++++S  + 
Sbjct: 207 IDVASNDIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRSNEVL 266

Query: 153 AALVLEDDEGECSDEEQDEESEEENDS-----------DAEGDNSNLSHNDSNH-SHNAS 200
           A L +  +            + E N S             EG     S  ++ H +H   
Sbjct: 267 ARLNVSSNGLGAGGVAFIASALERNSSLTRLNLSSNNLGLEGARVLASALEAAHVTHWEL 326

Query: 201 NQSHNNSNQSHNTSNQSHMSLKTGARLVE-LDLSDNAFGPIGVEGLADLLRSSCCFALEE 259
            ++H +        N    +++ G  +VE LDL +NA G    E +  +L  +   +L  
Sbjct: 327 QRNHLDDKGGACFLNALAGAIRNGYDVVEYLDLDNNALGEGSAEAVGKVL--AVSGSLTT 384

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L+L+ N LG  G K +S  L++ +  S    S  +          +++ GA  L AV   
Sbjct: 385 LRLSGNPLG-AGVKAISTGLNENHSLSSLHLSMCS----------IDHIGAAALGAVLCV 433

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             TL  ++M  N +   G   L+     NK L   NL+ N I + G + + +A+ K  +L
Sbjct: 434 NHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTSWNLSSNRIGHAGGLEMAKAVQKNRTL 493

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQI 438
             LNL   L+  A   +I+     N TLE +++  N  S    + + +A+ +N+   K +
Sbjct: 494 RHLNLRRNLMLEATGEAISDSFRANNTLERLDVAYNNFSYVCAMSIERALERNRASNKTL 553

Query: 439 NVSENQ 444
            V + Q
Sbjct: 554 LVPKLQ 559



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+ A+S    EN  L  L+L+  +I + GA  LG  L    +L  L++ +  +K  GA  
Sbjct: 395 GVKAISTGLNENHSLSSLHLSMCSIDHIGAAALGAVLCVNHTLRHLDMSNNRVKDGGAVE 454

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           +AK L  N  L   NL+ N I   GGL++ KA++    L+ +N+  N
Sbjct: 455 LAKGLAVNKCLTSWNLSSNRIGHAGGLEMAKAVQKNRTLRHLNLRRN 501



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNL------NDNTITYKG 54
            +A + K+ +TL H+++  N I HVG   ++ A  EN  +  L++      N N I   G
Sbjct: 193 FIAHLIKRNRTLVHIDVASNDIGHVGGVLIARALLENNTVISLDIGARAGVNGNHIGTPG 252

Query: 55  AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
           A  +G+ L     LA LN+    L + G + IA  L  N++L  +NL+ N + ++G   L
Sbjct: 253 AEAIGEVLRSNEVLARLNVSSNGLGAGGVAFIASALERNSSLTRLNLSSNNLGLEGARVL 312

Query: 115 VKAMK 119
             A++
Sbjct: 313 ASALE 317



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 86/402 (21%), Positives = 167/402 (41%), Gaps = 50/402 (12%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAAV  +      +++  N +   G   ++   + N+ L H+++  N I + G + + +A
Sbjct: 166 LAAVLSRNSHYSVLDLSGNRLRDDGARFIAHLIKRNRTLVHIDVASNDIGHVGGVLIARA 225

Query: 62  LSKLPSLAILNLGDCL------LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
           L +  ++  L++G         + + GA +I + L  N  L  +N++ N +   G   + 
Sbjct: 226 LLENNTVISLDIGARAGVNGNHIGTPGAEAIGEVLRSNEVLARLNVSSNGLGAGGVAFIA 285

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV----LEDDEGEC------- 164
            A++  + L ++N+S N  G EG   +   +++  +    +    L+D  G C       
Sbjct: 286 SALERNSSLTRLNLSSNNLGLEGARVLASALEAAHVTHWELQRNHLDDKGGACFLNALAG 345

Query: 165 -------SDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTS-NQ 216
                    E  D ++    +  AE     L+ + S  +   S        ++ +T  N+
Sbjct: 346 AIRNGYDVVEYLDLDNNALGEGSAEAVGKVLAVSGSLTTLRLSGNPLGAGVKAISTGLNE 405

Query: 217 SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC-FALEELKLNNNGLGITGCKLL 275
           +H        L  L LS  +   IG   L  +L   C    L  L ++NN +   G   L
Sbjct: 406 NHS-------LSSLHLSMCSIDHIGAAALGAVL---CVNHTLRHLDMSNNRVKDGGAVEL 455

Query: 276 SK--ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           +K  A++ C  S            +    NR+ + G   +A   +K +TL  + + +N +
Sbjct: 456 AKGLAVNKCLTS------------WNLSSNRIGHAGGLEMAKAVQKNRTLRHLNLRRNLM 503

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
                 A+SD+F  N  L  L++  N  +Y  A+ + +AL +
Sbjct: 504 LEATGEAISDSFRANNTLERLDVAYNNFSYVCAMSIERALER 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 1/133 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L AV     TL H++M  N +   G   L+     NK L   NL+ N I + G + + +A
Sbjct: 427 LGAVLCVNHTLRHLDMSNNRVKDGGAVELAKGLAVNKCLTSWNLSSNRIGHAGGLEMAKA 486

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN 120
           + K  +L  LNL   L+  A   +I+     N TLE +++  N  S    + + +A+ +N
Sbjct: 487 VQKNRTLRHLNLRRNLMLEATGEAISDSFRANNTLERLDVAYNNFSYVCAMSIERALERN 546

Query: 121 KTKLKQINVSENQ 133
           +   K + V + Q
Sbjct: 547 RASNKTLLVPKLQ 559


>gi|395862593|ref|XP_003803526.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
           3 [Otolemur garnettii]
          Length = 980

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 109/264 (41%), Gaps = 16/264 (6%)

Query: 197 HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
           H A          SH       + L +  +L ELDLSDNA G  G+  L        C  
Sbjct: 714 HAACFHRLGRCGLSHQCCFDISLVLSSNQKLAELDLSDNALGDFGIRLL--------CVG 765

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L+ L  N   L +  C L S     C + +       +L     G N L + G  +L   
Sbjct: 766 LKHLFCNLKKLWLVSCCLTSAC---CQDLASVLSPSRSLTRLYVGENTLGDSGVGILCEK 822

Query: 317 FKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
            K  +  L+++ +  +G+  V  TALS     N N  HL L  NT+   G   L + L  
Sbjct: 823 AKHPQCNLQKLGLVNSGLSSVCCTALSSVLSSNPNFTHLYLRGNTLGDMGVKLLCEGLLH 882

Query: 376 LP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            P   L +L L +C L S     ++  LT N  L  ++L  N++   G + L + ++ ++
Sbjct: 883 -PNCKLQVLELENCSLTSHCCWDLSTLLTSNQRLRKLSLGNNDLGDLGVMMLCEVLRQQS 941

Query: 434 KLKQ-INVSENQFGEEGVEEMEKL 456
            L Q + + E  F  E    +E L
Sbjct: 942 CLLQSLQLCEMYFNYETKRALETL 965



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 4/137 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
           L+ + +  +G+  V  TALS     N    HL L  NT+   G   L + L   P   L 
Sbjct: 830 LQKLGLVNSGLSSVCCTALSSVLSSNPNFTHLYLRGNTLGDMGVKLLCEGLLH-PNCKLQ 888

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
           +L L +C L S     ++  LT N  L  ++L  N++   G + L + ++ ++ L Q + 
Sbjct: 889 VLELENCSLTSHCCWDLSTLLTSNQRLRKLSLGNNDLGDLGVMMLCEVLRQQSCLLQSLQ 948

Query: 129 VSENQFGEEGVEEMEKL 145
           + E  F  E    +E L
Sbjct: 949 LCEMYFNYETKRALETL 965


>gi|291237672|ref|XP_002738757.1| PREDICTED: leucine rich repeat containing 45-like [Saccoglossus
           kowalevskii]
          Length = 453

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 23/257 (8%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH- 280
           K+   ++ LDL+ N     G + +A +L+ +C  +  EL L++N LG  G + +   L  
Sbjct: 30  KSNTVVISLDLTGNHVEGAGGKCIAAMLKENCYIS--ELNLSSNKLGSQGARAVGDMLEH 87

Query: 281 ---------DCYESSKKEGSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
                       E   K+  P          LK  I   N     G + L        TL
Sbjct: 88  NTTLQRINLSANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTL 147

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
           + +++  N + + G  A+S A  EN ++R L+L+ N    +GA+ +GQAL     L  L+
Sbjct: 148 DILDLSWNHLRNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALKVNKQLIDLD 207

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN-KTKLKQINVS 441
           L +  + + GA +IAK L  N TL+ + +  N IS  G + ++ A+ KN ++ L  I ++
Sbjct: 208 LTNNRITNDGALAIAKGLESNDTLKVLKIGKNPISAAGAMAILMAISKNPQSALTDIRLT 267

Query: 442 ENQFGEEGVEEMEKLMK 458
           +    EE  EEM K ++
Sbjct: 268 DIIITEE-FEEMLKAIQ 283



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 86/157 (54%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N+L ++GA+ +  + +   TL+R+ +  N          + A + N  L+ L LN+N  +
Sbjct: 71  NKLGSQGARAVGDMLEHNTTLQRINLSANEFKDKDAEPFTQALKSNYRLKELILNNNDFS 130

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   LG+A++   +L IL+L    L++ GA +I+K + +N ++  ++L+ N  + +G 
Sbjct: 131 EIGGEFLGEAIASNDTLDILDLSWNHLRNRGAIAISKAMAENNSIRILDLSWNGFANEGA 190

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           L + +A+K   +L  ++++ N+   +G   + K ++S
Sbjct: 191 LAMGQALKVNKQLIDLDLTNNRITNDGALAIAKGLES 227



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 3/139 (2%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +++  N + + G  A+S A  EN  +R L+L+ N    +GA+ +GQAL     L  
Sbjct: 146 TLDILDLSWNHLRNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALKVNKQLID 205

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN-KTKLKQIN 128
           L+L +  + + GA +IAK L  N TL+ + +  N IS  G + ++ A+ KN ++ L  I 
Sbjct: 206 LDLTNNRITNDGALAIAKGLESNDTLKVLKIGKNPISAAGAMAILMAISKNPQSALTDIR 265

Query: 129 VSENQFGEEGVEEMEKLMK 147
           +++    EE  EEM K ++
Sbjct: 266 LTDIIITEE-FEEMLKAIQ 283



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 69/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +AA+ K+   +  + +  N +   G  A+ D  E N  L+ +NL+ N    K A P  QA
Sbjct: 53  IAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINLSANEFKDKDAEPFTQA 112

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L L +      G   + + +  N TL+ ++L+ N +  +G + + KAM   
Sbjct: 113 LKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDILDLSWNHLRNRGAIAISKAMAEN 172

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             ++ +++S N F  EG   M + +K
Sbjct: 173 NSIRILDLSWNGFANEGALAMGQALK 198



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 120/299 (40%), Gaps = 61/299 (20%)

Query: 93  NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           NT +  ++LT N +   GG  +   +K    + ++N+S N+ G +G              
Sbjct: 32  NTVVISLDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGAR------------ 79

Query: 153 AALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN 212
                                       A GD   L HN +    N S     + +    
Sbjct: 80  ----------------------------AVGD--MLEHNTTLQRINLSANEFKDKDAEPF 109

Query: 213 TSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
           T      +LK+  RL EL L++N F  IG E L + + S+    L+ L L+ N L   G 
Sbjct: 110 TQ-----ALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDT--LDILDLSWNHLRNRGA 162

Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
             +SKA+ +            ++++     N   NEGA  +    K  K L  +++  N 
Sbjct: 163 IAISKAMAENN----------SIRILDLSWNGFANEGALAMGQALKVNKQLIDLDLTNNR 212

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLL 389
           I + G  A++   E N  L+ L +  N I+  GA+ +  A+SK P  A+  + L D ++
Sbjct: 213 ITNDGALAIAKGLESNDTLKVLKIGKNPISAAGAMAILMAISKNPQSALTDIRLTDIII 271



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 75/138 (54%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ + +  N          + A + N +L+ L LN+N  +  G   LG+A++   +L I
Sbjct: 90  TLQRINLSANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGEAIASNDTLDI 149

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    L++ GA +I+K + +N ++  ++L+ N  + +G L + +A+K   +L  ++++
Sbjct: 150 LDLSWNHLRNRGAIAISKAMAENNSIRILDLSWNGFANEGALAMGQALKVNKQLIDLDLT 209

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N+   +G   + K ++S
Sbjct: 210 NNRITNDGALAIAKGLES 227



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L+L  N +   G   +   L +   ++ LNL    L S GA ++   L  NTTL+ +NL+
Sbjct: 38  LDLTGNHVEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINLS 97

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
            NE   +      +A+K+  +LK++ ++ N F E G E
Sbjct: 98  ANEFKDKDAEPFTQALKSNYRLKELILNNNDFSEIGGE 135



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 45/274 (16%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           ++ AG   IA  L +N  + ++NL+ N++  QG   +   +++ T L++IN+S N+F ++
Sbjct: 45  VEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINLSANEFKDK 104

Query: 138 GVEEMEKLMKSFGMAAALVL-EDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHS 196
             E   + +KS      L+L  +D  E   E   E       + A  D  ++     NH 
Sbjct: 105 DAEPFTQALKSNYRLKELILNNNDFSEIGGEFLGE-------AIASNDTLDILDLSWNHL 157

Query: 197 HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
            N    + + +   +N+             +  LDLS N F   G   +   L+ +    
Sbjct: 158 RNRGAIAISKAMAENNS-------------IRILDLSWNGFANEGALAMGQALKVNK--Q 202

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA-KMLAA 315
           L +L L NN +   G   ++K L           S   LKV   G+N +   GA  +L A
Sbjct: 203 LIDLDLTNNRITNDGALAIAKGLE----------SNDTLKVLKIGKNPISAAGAMAILMA 252

Query: 316 VFKKLKTLERVEMPQNGIYHVGIT--ALSDAFEE 347
           + K          PQ+ +  + +T   +++ FEE
Sbjct: 253 ISKN---------PQSALTDIRLTDIIITEEFEE 277



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 48/84 (57%)

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           ++ AG   IA  L +N  + ++NL+ N++  QG   +   +++ T L++IN+S N+F ++
Sbjct: 45  VEGAGGKCIAAMLKENCYISELNLSSNKLGSQGARAVGDMLEHNTTLQRINLSANEFKDK 104

Query: 449 GVEEMEKLMKSFGMAAALVLEDDE 472
             E   + +KS      L+L +++
Sbjct: 105 DAEPFTQALKSNYRLKELILNNND 128


>gi|290973802|ref|XP_002669636.1| predicted protein [Naegleria gruberi]
 gi|284083186|gb|EFC36892.1| predicted protein [Naegleria gruberi]
          Length = 548

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 198/470 (42%), Gaps = 109/470 (23%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
            KKL  L H E+  +G  HV  ++L+        L  L+L DN I   GA    Q LS L
Sbjct: 141 LKKLN-LGHNEIGNDGAKHV--SSLT-------HLTALDLFDNGIGPNGA----QRLSSL 186

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            +L  LNLG+  +  AGA  I+      T L  +NL   ++   G    VK+++   KL 
Sbjct: 187 TNLTQLNLGNNEIGDAGAEHISSL----TNLTQLNLRITKLGANG----VKSLRGLKKLT 238

Query: 126 QINVSENQFGEEGVEEMEKL--MKSFGMAAALVLEDD-EGECSDEEQDEESEEENDSDAE 182
           ++++S NQ G EGV  + +L  +K   +    +  D  E  C  E               
Sbjct: 239 ELDLSGNQIGYEGVNNLSELKNLKKLNLGNNRITGDGAERLCGLE--------------- 283

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGV 242
               NL+  D    H                       L     L +++L  N  GP G 
Sbjct: 284 ----NLTELDLRAEH-----------------------LSQLKNLTQINLCLNQIGPNGA 316

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 302
           E L +L        L +L L +N +G    + L K  +              L     G 
Sbjct: 317 ERLCELTN------LTQLNLRSNLIGAIKAESLCKLEN--------------LTQLDLGY 356

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NR+E++GA+ L+    KLK L ++++  N I  +G  +LS    E  NL HL+LN N I 
Sbjct: 357 NRIEDDGAQRLS----KLKKLTQLDLSGNQIGSIGAQSLS----ELTNLTHLDLNGNGIE 408

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA    Q LSKL  L  L L D  +   G    AKYL++   L  ++L  N I   G 
Sbjct: 409 -DGA----QHLSKLKKLTRLGLNDNRIGDDG----AKYLSELNKLTHLSLDNNGIGDTGA 459

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            + +  +KN T L   ++ +N+    G + + KL++  G+ +    +D E
Sbjct: 460 -ECLSKLKNITYL---SLDDNEIETAGKKHLRKLIRC-GLCSIRTEDDTE 504



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 24/157 (15%)

Query: 302 RNRLENEGAKMLAAV--FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
           RN+++    K L+++   KKL  L   E+  +G  HV  ++L+       +L  L+L DN
Sbjct: 124 RNKIKPTVVKGLSSLTNLKKLN-LGHNEIGNDGAKHV--SSLT-------HLTALDLFDN 173

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            I   GA    Q LS L +L  LNLG+  +  AGA  I+      T L  +NL   ++  
Sbjct: 174 GIGPNGA----QRLSSLTNLTQLNLGNNEIGDAGAEHISSL----TNLTQLNLRITKLGA 225

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
            G    VK+++   KL ++++S NQ G EGV  + +L
Sbjct: 226 NG----VKSLRGLKKLTELDLSGNQIGYEGVNNLSEL 258



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 60/274 (21%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH----DC 282
           L +LDL  N   P  V+GL+ L        L++L L +N +G  G K +S   H    D 
Sbjct: 117 LTQLDLCRNKIKPTVVKGLSSLTN------LKKLNLGHNEIGNDGAKHVSSLTHLTALDL 170

Query: 283 YES------SKKEGSPLALKVFIAGRNRLENEGAKMLAAV-------------------- 316
           +++      +++  S   L     G N + + GA+ ++++                    
Sbjct: 171 FDNGIGPNGAQRLSSLTNLTQLNLGNNEIGDAGAEHISSLTNLTQLNLRITKLGANGVKS 230

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL------- 369
            + LK L  +++  N I + G+  LS    E KNL+ LNL +N IT  GA  L       
Sbjct: 231 LRGLKKLTELDLSGNQIGYEGVNNLS----ELKNLKKLNLGNNRITGDGAERLCGLENLT 286

Query: 370 -----GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
                 + LS+L +L  +NL  C L   G +  A+ L + T L  +NL  N I       
Sbjct: 287 ELDLRAEHLSQLKNLTQINL--C-LNQIGPNG-AERLCELTNLTQLNLRSNLIGAIKAES 342

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L K ++N   L Q+++  N+  ++G + + KL K
Sbjct: 343 LCK-LEN---LTQLDLGYNRIEDDGAQRLSKLKK 372


>gi|328874934|gb|EGG23299.1| hypothetical protein DFA_05431 [Dictyostelium fasciculatum]
          Length = 669

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 195/474 (41%), Gaps = 44/474 (9%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ML     K+KTL    +  N I    + AL DA      L  L+++ N I  +G + +GQ
Sbjct: 215 MLECAGCKIKTLN---LATNQITDDSMDALIDAIVGIDTLSELDISSNRIGERGGVSIGQ 271

Query: 61  ALSKLP---SLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVK 116
            L  +P   SL  L L    +      +I + L T +  +E +NL    I   G + +  
Sbjct: 272 RL--IPHDRSLRTLVLASNDIGPDAGMAIGQGLATPDIMIESLNLAHTLIGDDGAMAIAG 329

Query: 117 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEE 176
           A+ +   LK +++S N    +    +   +        L+L+          Q  E   +
Sbjct: 330 ALHSNRSLKHLDLSFNCLENDAGCAIGAAIAKNQAVTTLLLK--------RNQFGEHTVK 381

Query: 177 NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
              DA   N++L+  D      + NQ      +S         SL     L +LDLS N 
Sbjct: 382 VIGDALKTNTSLTLLDL-----SGNQIGLKGAKS------LAFSLPLNKTLADLDLSYNL 430

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC------YESSK--- 287
            G  G + + D L ++    L  L L  N +G+  CK +S++L +         S++   
Sbjct: 431 LGDAGGKLIGDCLATNA--GLVRLNLAANRIGVETCKSISQSLKNSNLQFNHLPSNQFNL 488

Query: 288 -KEGSPLALKVFIAGRNRL----ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
            ++  P+ +  F+  +        +     +A+    L  L  + +  N +   G   LS
Sbjct: 489 DRQDIPIIIHYFLRNKKSTFLTSSSPNIHHIASGQASLSKLRWICLDCNRVGDEGAIVLS 548

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +    N  L+ ++L +N I  +G   +G++L     L  L L   L+   GA SI   L 
Sbjct: 549 EVIANNSTLKSISLTNNHIGERGGKAIGESLMMNTKLINLQLDSNLIGPVGAKSIGDALR 608

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
            NTTL+ + L+ N I   GG  +  A+ +   LK + +  N FG++    +E L
Sbjct: 609 RNTTLQSLGLSGNRIEDDGGRAINDALCDNNSLKALMIRNNSFGQDLQSLIESL 662



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 184/460 (40%), Gaps = 92/460 (20%)

Query: 30  LSDAFE-ENKKLRHLNLND-NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
           L+  FE E + + HL+L+     T  G I     L KL SL +        +   ASSIA
Sbjct: 75  LTRLFEQEGESIGHLDLSKCKYFTIDGLIDQFVRLPKLQSLKMQ-----FSRQVDASSIA 129

Query: 88  KYLTD-NTTLEDVNLTCN--------------------EISV-------QGGLDLVKAMK 119
           + L + ++T   ++++CN                     I+V       + G+ L  A+ 
Sbjct: 130 RLLENTHSTFSHLDISCNMNLHGSQFVGAPLRVNPHISSITVMHSHLNDEDGVALFSALS 189

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLM-------KSFGMAAALVLEDDEGECSDEEQ--D 170
             + L  +N S NQ G+E V  + +++       K+  +A   + +D      D     D
Sbjct: 190 GNSGLLHLNASFNQLGDESVRLLARMLECAGCKIKTLNLATNQITDDSMDALIDAIVGID 249

Query: 171 EESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVEL 230
             SE +  S+  G+   +S       H+ S                          L  L
Sbjct: 250 TLSELDISSNRIGERGGVSIGQRLIPHDRS--------------------------LRTL 283

Query: 231 DLSDNAFGP-----IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
            L+ N  GP     IG +GLA     +    +E L L +  +G  G   ++ ALH     
Sbjct: 284 VLASNDIGPDAGMAIG-QGLA-----TPDIMIESLNLAHTLIGDDGAMAIAGALH----- 332

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                S  +LK      N LEN+    + A   K + +  + + +N      +  + DA 
Sbjct: 333 -----SNRSLKHLDLSFNCLENDAGCAIGAAIAKNQAVTTLLLKRNQFGEHTVKVIGDAL 387

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
           + N +L  L+L+ N I  KGA  L  +L    +LA L+L   LL  AG   I   L  N 
Sbjct: 388 KTNTSLTLLDLSGNQIGLKGAKSLAFSLPLNKTLADLDLSYNLLGDAGGKLIGDCLATNA 447

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
            L  +NL  N I V+    + +++KN + L+  ++  NQF
Sbjct: 448 GLVRLNLAANRIGVETCKSISQSLKN-SNLQFNHLPSNQF 486



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 265 NGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
           N LG    +LL++ L         E +   +K      N++ ++    L      + TL 
Sbjct: 202 NQLGDESVRLLARML---------ECAGCKIKTLNLATNQITDDSMDALIDAIVGIDTLS 252

Query: 325 RVEMPQNGIYHVGITALSDAF-EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI-- 381
            +++  N I   G  ++       +++LR L L  N I     + +GQ L+  P + I  
Sbjct: 253 ELDISSNRIGERGGVSIGQRLIPHDRSLRTLVLASNDIGPDAGMAIGQGLAT-PDIMIES 311

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           LNL   L+   GA +IA  L  N +L+ ++L+ N +    G  +  A+     +  + + 
Sbjct: 312 LNLAHTLIGDDGAMAIAGALHSNRSLKHLDLSFNCLENDAGCAIGAAIAKNQAVTTLLLK 371

Query: 442 ENQFGEEGVEEMEKLMKS 459
            NQFGE  V+ +   +K+
Sbjct: 372 RNQFGEHTVKVIGDALKT 389


>gi|242062330|ref|XP_002452454.1| hypothetical protein SORBIDRAFT_04g026090 [Sorghum bicolor]
 gi|241932285|gb|EES05430.1| hypothetical protein SORBIDRAFT_04g026090 [Sorghum bicolor]
          Length = 543

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 70/294 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L++SDNA G  GV   ++LL+S    +LEEL + N+G+        +KAL +  
Sbjct: 213 GSVLRYLNISDNALGEKGVRAFSELLKSQE--SLEELYVMNDGISEEA----AKALSELI 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            +++K      LKV     N   +EGA  +A + K+   +E        I   G  ALS+
Sbjct: 267 PATEK------LKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKL--------------------------- 376
           A      L+ L+L DN       + L + LSKL                           
Sbjct: 321 ALGTCTRLKKLDLRDNLFGVDAGLALSKTLSKLHDLVELYLSDLNLENEGTISIVKALKQ 380

Query: 377 --PSL-------------AILNLGDCL---------------LKSAGASSIAKYLTD-NT 405
             P L             A L+L +CL               LK  GA  IAK L D +T
Sbjct: 381 SAPQLEVLEMAGNEINAKAALDLAECLTAMQSLKKLTLAENELKDDGAVIIAKSLEDGHT 440

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L++++++ N +   G     +A+ +K    Q+N++ N   +EG++E+++++K+
Sbjct: 441 DLKELDVSTNMLQRVGARCFARAVADKPAFVQLNINGNFISDEGIDEVKEILKA 494



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +E        I   G  ALS+A     +L+ L+L DN       + L + 
Sbjct: 290 IAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKT 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
           LSKL  L  L L D  L++ G  SI K L  +   LE + +  NEI+ +  LDL + +  
Sbjct: 350 LSKLHDLVELYLSDLNLENEGTISIVKALKQSAPQLEVLEMAGNEINAKAALDLAECLTA 409

Query: 121 KTKLKQINVSENQFGEEG 138
              LK++ ++EN+  ++G
Sbjct: 410 MQSLKKLTLAENELKDDG 427



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 80/149 (53%), Gaps = 2/149 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+    KL  L  + +    + + G  ++  A +++  +L  L +  N I  K A+ L +
Sbjct: 346 LSKTLSKLHDLVELYLSDLNLENEGTISIVKALKQSAPQLEVLEMAGNEINAKAALDLAE 405

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L+ + SL  L L +  LK  GA  IAK L D +T L++++++ N +   G     +A+ 
Sbjct: 406 CLTAMQSLKKLTLAENELKDDGAVIIAKSLEDGHTDLKELDVSTNMLQRVGARCFARAVA 465

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           +K    Q+N++ N   +EG++E+++++K+
Sbjct: 466 DKPAFVQLNINGNFISDEGIDEVKEILKA 494



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
            +N   GI    +    L    E+ K + + + +  F+AGR   E+E   ++    K L+
Sbjct: 159 FSNRSFGIGAANVAGPIL----EAVKNQLTEVDISDFVAGRP--EDEALDVMRIFSKALE 212

Query: 322 --TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N +   G+ A S+  +  ++L  L + ++ I+ + A  L + +     L
Sbjct: 213 GSVLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKL 272

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK+++
Sbjct: 273 KVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLD 332

Query: 440 VSENQFG 446
           + +N FG
Sbjct: 333 LRDNLFG 339



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 61/125 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A S+  +  + L  L + ++ I+ + A  L + +     L +
Sbjct: 215 VLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKV 274

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  +E    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 275 LHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLR 334

Query: 131 ENQFG 135
           +N FG
Sbjct: 335 DNLFG 339



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 11/186 (5%)

Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
           ++ SKAL         EGS   L+      N L  +G +  + + K  ++LE + +  +G
Sbjct: 205 RIFSKAL---------EGS--VLRYLNISDNALGEKGVRAFSELLKSQESLEELYVMNDG 253

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
           I      ALS+     + L+ L+ ++N    +GA+ + + + + P++         + S 
Sbjct: 254 ISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKRSPNVESFRCSATRIGSD 313

Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
           G  ++++ L   T L+ ++L  N   V  GL L K +     L ++ +S+     EG   
Sbjct: 314 GGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLSKLHDLVELYLSDLNLENEGTIS 373

Query: 453 MEKLMK 458
           + K +K
Sbjct: 374 IVKALK 379



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 68/143 (47%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           + K  ++LE + +  +GI      ALS+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LLKSQESLEELYVMNDGISEEAAKALSELIPATEKLKVLHFHNNMTGDEGAMYIAEMVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P++         + S G  ++++ L   T L+ ++L  N   V  GL L K +     L
Sbjct: 297 SPNVESFRCSATRIGSDGGVALSEALGTCTRLKKLDLRDNLFGVDAGLALSKTLSKLHDL 356

Query: 125 KQINVSENQFGEEGVEEMEKLMK 147
            ++ +S+     EG   + K +K
Sbjct: 357 VELYLSDLNLENEGTISIVKALK 379


>gi|118384510|ref|XP_001025403.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89307170|gb|EAS05158.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 357

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 14/225 (6%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  ++ELD+SDNA  P G   L+  L  +   +L+   +NN GLGI G K +S AL    
Sbjct: 100 GKNIIELDISDNAVNPFGAIALSPFLEQAT--SLKVFLINNAGLGIDGVKTISAALA--- 154

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                +G+P  L+ F   RNR EN GA  +A    KL  L+ + + Q+ I   G+ AL  
Sbjct: 155 -----KGTP-NLEKFAITRNRAENPGAIAIAEALPKLTKLKELIVFQDVIKKDGMLALLK 208

Query: 344 AFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +   N  +L  L++ DN +  +    +   +     L  LN+ DC ++      I + L 
Sbjct: 209 SLATNCPDLELLDIRDNFLKEETIQEMANLIKVCKKLRALNISDCNIEEDENDIIIQALE 268

Query: 403 DN-TTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQF 445
           ++   LE +     E++      L+  + ++ ++LK++++  N F
Sbjct: 269 ESEVKLEKLGYNYAELNSNQAKKLIDILFSRNSELKRLDIKGNDF 313



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 19/230 (8%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK-LPSL 68
           K +  +++  N +   G  ALS   E+   L+   +N+  +   G   +  AL+K  P+L
Sbjct: 101 KNIIELDISDNAVNPFGAIALSPFLEQATSLKVFLINNAGLGIDGVKTISAALAKGTPNL 160

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQI 127
               +     ++ GA +IA+ L   T L+++ +  + I   G L L+K++  N   L+ +
Sbjct: 161 EKFAITRNRAENPGAIAIAEALPKLTKLKELIVFQDVIKKDGMLALLKSLATNCPDLELL 220

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
           ++ +N   EE ++EM  L+K      AL + D    C+ E      E+END   +     
Sbjct: 221 DIRDNFLKEETIQEMANLIKVCKKLRALNISD----CNIE------EDENDIIIQA---- 266

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
           L  ++        N +  NSNQ+    +   +     + L  LD+  N F
Sbjct: 267 LEESEVKLEKLGYNYAELNSNQAKKLID---ILFSRNSELKRLDIKGNDF 313


>gi|401425110|ref|XP_003877040.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322493284|emb|CBZ28569.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 753

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)

Query: 253 CCFA-----------LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           CC A           L  L L  N  G+ G   L +A+         E +P  ++    G
Sbjct: 53  CCVAEVIRTLNDDSQLRVLVLEENSFGLPGVTALMEAI---------EANPNRIRELRLG 103

Query: 302 RNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEEN-KNLRHLNLNDN 359
           +N L ++ A ++     +    L+ +++ +N I  +G+  ++ A ++   ++  L+ ++N
Sbjct: 104 KNNLMDQAAVVIGHTLSRSGCGLKVLDLSENNITKLGVIPIAAALQQPFCDIVELSFHNN 163

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            I    A  LGQAL   P L  L+LG   L+  GA+ IA+ +     L  ++LT N IS 
Sbjct: 164 KIECDAASYLGQALRAAPKLKHLHLGYNALRDNGAAQIARSVPHAACLSTLDLTANRISR 223

Query: 420 QGGLDLVKAMKNKT-KLKQINVSENQFGEEGV 450
           +GG +LV+A+   T  ++++N+  NQ   E +
Sbjct: 224 EGGEELVRALMTPTCTVQRLNLRHNQLDSETI 255



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ +++ +N I  +G+  ++ A ++    +  L+ ++N I    A  LGQAL   P L  
Sbjct: 126 LKVLDLSENNITKLGVIPIAAALQQPFCDIVELSFHNNKIECDAASYLGQALRAAPKLKH 185

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINV 129
           L+LG   L+  GA+ IA+ +     L  ++LT N IS +GG +LV+A+   T  ++++N+
Sbjct: 186 LHLGYNALRDNGAAQIARSVPHAACLSTLDLTANRISREGGEELVRALMTPTCTVQRLNL 245

Query: 130 SENQFGEEGV 139
             NQ   E +
Sbjct: 246 RHNQLDSETI 255



 Score = 38.1 bits (87), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 13/237 (5%)

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
           H   ++G  L  LDLS+N    +GV  +A  L+   C  + EL  +NN +       L +
Sbjct: 117 HTLSRSGCGLKVLDLSENNITKLGVIPIAAALQQPFC-DIVELSFHNNKIECDAASYLGQ 175

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           AL           +P  LK    G N L + GA  +A        L  +++  N I   G
Sbjct: 176 AL---------RAAP-KLKHLHLGYNALRDNGAAQIARSVPHAACLSTLDLTANRISREG 225

Query: 338 ITALSDAF-EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
              L  A       ++ LNL  N +  +  +     ++   SL  L LG        A++
Sbjct: 226 GEELVRALMTPTCTVQRLNLRHNQLDSETIVLFADVIAHNTSLIQLFLGFMSPSPEAAAA 285

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEE 452
           +   +  N TL  +++   +++ +  L L++A++ K T L  +     +F    V+E
Sbjct: 286 VLSAIPQNHTLLLLDIYGWKLNPKNTLALIQAVQEKNTTLAALVTDACEFIAPQVDE 342


>gi|145494422|ref|XP_001433205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400322|emb|CAK65808.1| unnamed protein product [Paramecium tetraurelia]
          Length = 348

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 16/217 (7%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  ++ LDLS+NA  P G E L   L+ +    L+ L LNN GLGI G   +S+ L    
Sbjct: 92  GLNILSLDLSNNAVNPFGAEALKPFLKQA--HQLQRLFLNNCGLGIRGVTQVSEGL---- 145

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
               +EG    L++    RNR E +GA  ++  F   K L+ + + QNGI   G+  L  
Sbjct: 146 ----QEGEH-NLQILAIARNRAECDGAIEISKAFPTCKKLQELHIYQNGIKQKGMMELLS 200

Query: 344 AFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
           +  ++   L  +++ DN +       L   ++    L  +N+ DC ++      I + L+
Sbjct: 201 SLNKSCAELTTIDIRDNFVHEATTQVLSDLITNAAHLTAINISDCNIQGKQNKQILESLS 260

Query: 403 DNTTLEDVNLTCNEIS-VQGG---LDLVKAMKNKTKL 435
               +E +     E++ VQG      +VK + N TKL
Sbjct: 261 KLVKIERLGYNYAELNDVQGNELYEIIVKQVDNVTKL 297


>gi|320164574|gb|EFW41473.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 485

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 15/238 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK   +L+ L LS N   PI    +ADLLR +    ++ L L  N +G      ++ AL 
Sbjct: 43  LKVNTKLIFLSLSAN---PIAAVTIADLLRVNKT--IQNLFLQENQIGDADAVAIADALK 97

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                     + L LKV     N++ + GA  +A   K   TL+++ + +N I   G  A
Sbjct: 98  -----VNTTLNDLDLKV-----NQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVA 147

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           ++DA + N  L  L L +N I   GA  + +AL+   ++  L L    +  AGA +IA+ 
Sbjct: 148 IADALKLNTTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEA 207

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L  NTTL ++ L   +I   G   + +A+K  T L  + +S NQ G+ G + + + +K
Sbjct: 208 LKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALK 265



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 76/137 (55%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++  N I   G  A++DA + N  L+ L L++N I   GA+ +  AL    +LA 
Sbjct: 101 TLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIADALKLNTTLAR 160

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L +  +  AGA +IA+ LT NTT+ ++ L  N+I   G   + +A+K  T L ++ + 
Sbjct: 161 LLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLH 220

Query: 131 ENQFGEEGVEEMEKLMK 147
           + Q G+ G + + + +K
Sbjct: 221 QTQIGDVGAQAIAEALK 237



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 72/137 (52%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ + + +N I   G  A++DA + N  L  L L +N I   GA  + +AL+   ++  
Sbjct: 129 TLKKLRLDENQIGDAGAVAIADALKLNTTLARLLLVENQIGKAGAQAIAEALTVNTTVTE 188

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    +  AGA +IA+ L  NTTL ++ L   +I   G   + +A+K  T L  + +S
Sbjct: 189 LRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLS 248

Query: 131 ENQFGEEGVEEMEKLMK 147
            NQ G+ G + + + +K
Sbjct: 249 GNQIGDIGAQAIAEALK 265



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 24/251 (9%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+ +  + N KL  L+L+ N I    A+ +   L    ++  L L +  +  A A +IA 
Sbjct: 38  AVVEGLKVNTKLIFLSLSANPI---AAVTIADLLRVNKTIQNLFLQENQIGDADAVAIAD 94

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L  NTTL D++L  N+I   G + +  A+K    LK++ + ENQ G+ G   +   +K 
Sbjct: 95  ALKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIADALKL 154

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
               A L+L +++   +  +   E+   N +  E         D N   +A  Q+     
Sbjct: 155 NTTLARLLLVENQIGKAGAQAIAEALTVNTTVTE------LRLDKNQIGDAGAQAIAE-- 206

Query: 209 QSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
                      +LK    L EL L     G +G + +A+ L+ +    L +L+L+ N +G
Sbjct: 207 -----------ALKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTT--LIDLQLSGNQIG 253

Query: 269 ITGCKLLSKAL 279
             G + +++AL
Sbjct: 254 DIGAQAIAEAL 264



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 76/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + +  KT++++ + +N I      A++DA + N  L  L+L  N I   GA+ +  A
Sbjct: 64  IADLLRVNKTIQNLFLQENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAVAIADA 123

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +  AGA +IA  L  NTTL  + L  N+I   G   + +A+   
Sbjct: 124 LKLNMTLKKLRLDENQIGDAGAVAIADALKLNTTLARLLLVENQIGKAGAQAIAEALTVN 183

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T + ++ + +NQ G+ G + + + +K
Sbjct: 184 TTVTELRLDKNQIGDAGAQAIAEALK 209



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 23/228 (10%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           +    ++D    NK +++L L +N I    A+ +  AL    +L  L+L    +  AGA 
Sbjct: 59  IAAVTIADLLRVNKTIQNLFLQENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAV 118

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           +IA  L  N TL+ + L  N+I   G + +  A+K  T L ++ + ENQ G+ G +    
Sbjct: 119 AIADALKLNMTLKKLRLDENQIGDAGAVAIADALKLNTTLARLLLVENQIGKAGAQ---- 174

Query: 145 LMKSFGMAAALVLEDDEGECS-DEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQS 203
                 +A AL +     E   D+ Q  ++  +  ++A   N+ L+            + 
Sbjct: 175 -----AIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLT------------EL 217

Query: 204 HNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
             +  Q  +   Q+   +LK    L++L LS N  G IG + +A+ L+
Sbjct: 218 RLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALK 265


>gi|291229710|ref|XP_002734814.1| PREDICTED: nucleotide-binding oligomerization domain containing
           1-like [Saccoglossus kowalevskii]
          Length = 483

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 10/187 (5%)

Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
           C LLSK +  C            LKVF   +++++++  ++L +      +LE +++  N
Sbjct: 261 CLLLSKCVKKCS----------TLKVFKLHKSKVDDDKVRVLVSHILDHPSLEELDLGHN 310

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
            I   G  A+      +  L  LNL +N I   GA  +G AL+K  +L  LNL    L  
Sbjct: 311 MIGDHGARAIGKLLNNHSKLVKLNLCNNKIRANGAGAIGHALTKNTTLKFLNLRLNRLGD 370

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            G  +I + L  N+TLE++N+  N+++      L + +   + LK IN+S N+ G +G +
Sbjct: 371 DGGQAIGRALLKNSTLEEINMGSNDVTEPTAAVLSQVVVQNSTLKIINLSCNRLGPDGGK 430

Query: 452 EMEKLMK 458
           ++++ M+
Sbjct: 431 QLQEGME 437



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 74/137 (54%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +LE +++  N I   G  A+      + KL  LNL +N I   GA  +G AL+K  +L  
Sbjct: 301 SLEELDLGHNMIGDHGARAIGKLLNNHSKLVKLNLCNNKIRANGAGAIGHALTKNTTLKF 360

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    L   G  +I + L  N+TLE++N+  N+++      L + +   + LK IN+S
Sbjct: 361 LNLRLNRLGDDGGQAIGRALLKNSTLEEINMGSNDVTEPTAAVLSQVVVQNSTLKIINLS 420

Query: 131 ENQFGEEGVEEMEKLMK 147
            N+ G +G +++++ M+
Sbjct: 421 CNRLGPDGGKQLQEGME 437



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           +  N    +L+   KK  TL+  ++ ++ +    +  L     ++ +L  L+L  N I  
Sbjct: 255 QFTNRDCLLLSKCVKKCSTLKVFKLHKSKVDDDKVRVLVSHILDHPSLEELDLGHNMIGD 314

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
            GA  +G+ L+    L  LNL +  +++ GA +I   LT NTTL+ +NL  N +   GG 
Sbjct: 315 HGARAIGKLLNNHSKLVKLNLCNNKIRANGAGAIGHALTKNTTLKFLNLRLNRLGDDGGQ 374

Query: 424 DLVKAMKNKTKLKQINVSENQFGE 447
            + +A+   + L++IN+  N   E
Sbjct: 375 AIGRALLKNSTLEEINMGSNDVTE 398



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 69/136 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L+   KK  TL+  ++ ++ +    +  L     ++  L  L+L  N I   GA  +G+
Sbjct: 263 LLSKCVKKCSTLKVFKLHKSKVDDDKVRVLVSHILDHPSLEELDLGHNMIGDHGARAIGK 322

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L+    L  LNL +  +++ GA +I   LT NTTL+ +NL  N +   GG  + +A+  
Sbjct: 323 LLNNHSKLVKLNLCNNKIRANGAGAIGHALTKNTTLKFLNLRLNRLGDDGGQAIGRALLK 382

Query: 121 KTKLKQINVSENQFGE 136
            + L++IN+  N   E
Sbjct: 383 NSTLEEINMGSNDVTE 398



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 68/128 (53%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  A+  A  +N  L+ LNL  N +   G   +G+AL K  +L  +N+G   + 
Sbjct: 338 NKIRANGAGAIGHALTKNTTLKFLNLRLNRLGDDGGQAIGRALLKNSTLEEINMGSNDVT 397

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
              A+ +++ +  N+TL+ +NL+CN +   GG  L + M+  + + ++++   + G+E  
Sbjct: 398 EPTAAVLSQVVVQNSTLKIINLSCNRLGPDGGKQLQEGMEENSTVIEMDLRLTESGQESE 457

Query: 140 EEMEKLMK 147
             + +++K
Sbjct: 458 YCINQILK 465


>gi|410983571|ref|XP_003998112.1| PREDICTED: protein NLRC5 [Felis catus]
          Length = 1868

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 81/312 (25%), Positives = 131/312 (41%), Gaps = 67/312 (21%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA------------- 256
            +H TS  SH        L ELDLS+N FG  G   L  +L   C                
Sbjct: 1514 AHLTSGLSHC-----LHLEELDLSNNQFGEEGTRVLMGVLEGKCWLKRLDLSHLPLGGSI 1568

Query: 257  -------------LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
                         L+ L+L+ NG+   GC LLS+AL           +  +L+      N
Sbjct: 1569 LAVLTQRLRHMTLLQSLRLSRNGVCDVGCHLLSEALR----------AATSLEELDLSHN 1618

Query: 304  RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
            ++ + GA++LA V   L  L ++++  NGI   G   L+++    ++L  L L  N +  
Sbjct: 1619 QIGDTGAQLLAVVLPWLPELRKIDLSGNGIGPAGGARLAESLALCRHLEQLMLGCNALGD 1678

Query: 364  KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS----- 418
              A+ L Q L +   L IL+L    L   GA S+++ L     +E+V+L  N ++     
Sbjct: 1679 ATALGLAQGLPR--HLRILHLPSSRLGPEGALSLSQALDGCPYVEEVSLAENSLARGIPQ 1736

Query: 419  -VQG-----GLDLVKA-MKNKT------------KLKQINVSENQFGEEGVEEMEKLMKS 459
              QG      +DLV   + + T             L++I +S N  G+E   E+ +++  
Sbjct: 1737 FCQGLPLLRRIDLVSCDIDDHTAKPLAASLLLCPALEEILLSWNVLGDEAAAELARVLPQ 1796

Query: 460  FGMAAALVLEDD 471
             G    + LE +
Sbjct: 1797 MGRLKRMDLEKN 1808



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 19/219 (8%)

Query: 243  EGLADLLRS-SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
            EGLA L    S C  LEEL L+NN  G  G ++L   L       + + S L L      
Sbjct: 1511 EGLAHLTSGLSHCLHLEELDLSNNQFGEEGTRVLMGVLEGKCWLKRLDLSHLPL------ 1564

Query: 302  RNRLENEGAKMLAAVFKKLK---TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND 358
                   G  +LA + ++L+    L+ + + +NG+  VG   LS+A     +L  L+L+ 
Sbjct: 1565 -------GGSILAVLTQRLRHMTLLQSLRLSRNGVCDVGCHLLSEALRAATSLEELDLSH 1617

Query: 359  NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
            N I   GA  L   L  LP L  ++L    +  AG + +A+ L     LE + L CN + 
Sbjct: 1618 NQIGDTGAQLLAVVLPWLPELRKIDLSGNGIGPAGGARLAESLALCRHLEQLMLGCNALG 1677

Query: 419  VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
                L L + +     L+ +++  ++ G EG   + + +
Sbjct: 1678 DATALGLAQGLPR--HLRILHLPSSRLGPEGALSLSQAL 1714



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 146/371 (39%), Gaps = 41/371 (11%)

Query: 101  LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
            LTC+ +  +G   L   + +   L+++++S NQFGEEG   +  ++              
Sbjct: 1503 LTCSCVRSEGLAHLTSGLSHCLHLEELDLSNNQFGEEGTRVLMGVL-------------- 1548

Query: 161  EGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS 220
            EG+C  +  D        S        L H     S   S     +    H  S     +
Sbjct: 1549 EGKCWLKRLDLSHLPLGGSILAVLTQRLRHMTLLQSLRLSRNGVCDVG-CHLLSE----A 1603

Query: 221  LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG--------- 271
            L+    L ELDLS N  G  G + LA +L       L ++ L+ NG+G  G         
Sbjct: 1604 LRAATSLEELDLSHNQIGDTGAQLLAVVL--PWLPELRKIDLSGNGIGPAGGARLAESLA 1661

Query: 272  -CKLLSK------ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             C+ L +      AL D       +G P  L++     +RL  EGA  L+        +E
Sbjct: 1662 LCRHLEQLMLGCNALGDATALGLAQGLPRHLRILHLPSSRLGPEGALSLSQALDGCPYVE 1721

Query: 325  RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
             V + +N +   GI            LR ++L    I    A PL  +L   P+L  + L
Sbjct: 1722 EVSLAENSLAR-GIPQFCQGLPL---LRRIDLVSCDIDDHTAKPLAASLLLCPALEEILL 1777

Query: 385  GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
               +L    A+ +A+ L     L+ ++L  N I+  G   L + +   + ++ I +  N 
Sbjct: 1778 SWNVLGDEAAAELARVLPQMGRLKRMDLEKNRITACGAWLLAEGLAQGSGIQVIRLWNNP 1837

Query: 445  FGEEGVEEMEK 455
               + V+ ++K
Sbjct: 1838 IPPDTVQRLQK 1848



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 2/146 (1%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +L    + +  L+ + + +NG+  VG   LS+A      L  L+L+ N I   GA  L  
Sbjct: 1571 VLTQRLRHMTLLQSLRLSRNGVCDVGCHLLSEALRAATSLEELDLSHNQIGDTGAQLLAV 1630

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             L  LP L  ++L    +  AG + +A+ L     LE + L CN +     L L + +  
Sbjct: 1631 VLPWLPELRKIDLSGNGIGPAGGARLAESLALCRHLEQLMLGCNALGDATALGLAQGLPR 1690

Query: 121  KTKLKQINVSENQFGEEGVEEMEKLM 146
               L+ +++  ++ G EG   + + +
Sbjct: 1691 --HLRILHLPSSRLGPEGALSLSQAL 1714



 Score = 40.8 bits (94), Expect = 1.4,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 16/197 (8%)

Query: 279  LHDCYE--SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
            +HD  E  +  +EG P   KV ++G N+L+NEG +++A    +L     +++  NG+   
Sbjct: 864  VHDVQELIAQLQEG-PHLDKVDLSG-NQLDNEGCRLMAEAAAQLDITRNLDLSDNGLSVD 921

Query: 337  GITALSDAFEENKNLR--HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
            G+  +  A    + L   H++L   T+    A P  +    +   A L+  D L++    
Sbjct: 922  GVDGVLSAVSMCQTLAELHISLLHKTVVLTFA-PKQEEQGGIQERAALH--DGLMRQMPC 978

Query: 395  SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
                  L  ++T   + LT   +  +    L +A+    +L  ++ S N  G+EGV ++ 
Sbjct: 979  E-----LPPHST--RIRLTHCGLQAKHLAQLCRALGGSCRLSHLDFSGNALGDEGVAQLA 1031

Query: 455  KLMKSFGMAAALVLEDD 471
            +L+   G   +L L ++
Sbjct: 1032 QLLPGLGTLQSLNLSEN 1048


>gi|443732119|gb|ELU16968.1| hypothetical protein CAPTEDRAFT_151888 [Capitella teleta]
          Length = 373

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 27/252 (10%)

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
           +  L+    +  LDL  N    +G + +A LL  +    LEEL L NN +G  G K +++
Sbjct: 26  YKWLRNNIFVTALDLRYNNITDVGSKHIAKLLEETA--TLEELNLMNNDIGEEGAKDIAQ 83

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           AL       K E     LK      N++  +G    A   +   TLE +++    +    
Sbjct: 84  AL------LKNE----TLKKLRMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDC 133

Query: 338 ITALSDAFEENKNLRHLNLN---------DNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
           + AL+     N  L+ LN N         + T+ +   + + ++L +L      +L    
Sbjct: 134 VIALATVLRANSTLKSLNANRPILFSHQEETTVHFANMLKVNRSLKEL------HLMKYD 187

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           ++  G + +++ L DN TL  +NL+CN I+  G  +L K ++  T LK I++S N+ G++
Sbjct: 188 MRDFGITRLSEKLVDNMTLTYLNLSCNRITRDGAKELSKLLRKDTALKVIDLSFNRLGDD 247

Query: 449 GVEEMEKLMKSF 460
           G  ++ + + +F
Sbjct: 248 GAIDIAEALMTF 259



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 26/266 (9%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           L+  A L EL+L +N  G  G + +A  LL++     L++L+++ N +G  G    ++ L
Sbjct: 57  LEETATLEELNLMNNDIGEEGAKDIAQALLKNE---TLKKLRMSGNKIGFKGGMCFAQTL 113

Query: 280 H--------DCYESSKKEGSPLALKVFIAGRNRLEN-------------EGAKMLAAVFK 318
                    D  ++       +AL   +   + L++             E     A + K
Sbjct: 114 QINTTLEELDLGDTDLTTDCVIALATVLRANSTLKSLNANRPILFSHQEETTVHFANMLK 173

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
             ++L+ + + +  +   GIT LS+   +N  L +LNL+ N IT  GA  L + L K  +
Sbjct: 174 VNRSLKELHLMKYDMRDFGITRLSEKLVDNMTLTYLNLSCNRITRDGAKELSKLLRKDTA 233

Query: 379 LAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
           L +++L    L   GA  IA+ L T NT L+ + +T NEI  +G   L  A++  + L  
Sbjct: 234 LKVIDLSFNRLGDDGAIDIAEALMTFNTNLQTLVITSNEIRAKGLCALANALQMNSTLDN 293

Query: 438 INVSENQFGEEGVEEMEKLMKSFGMA 463
           I +  N   E        L+ S  +A
Sbjct: 294 IYIWGNCLEEPACIAFAGLIDSGRIA 319



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 140/335 (41%), Gaps = 51/335 (15%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           +   G+  IAK L +  TLE++NL  N+I  +G  D+ +A+     LK++ +S N+ G +
Sbjct: 45  ITDVGSKHIAKLLEETATLEELNLMNNDIGEEGAKDIAQALLKNETLKKLRMSGNKIGFK 104

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD-----NSNLSHND 192
           G           GM  A  L+ +    + EE D       D+D   D      + L  N 
Sbjct: 105 G-----------GMCFAQTLQIN---TTLEELD-----LGDTDLTTDCVIALATVLRANS 145

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
           +  S NA N+    S+Q   T + ++M LK    L EL L        G+  L++ L  +
Sbjct: 146 TLKSLNA-NRPILFSHQEETTVHFANM-LKVNRSLKELHLMKYDMRDFGITRLSEKLVDN 203

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
               L  L L+ N +   G K LSK L              ALKV     NRL ++GA  
Sbjct: 204 --MTLTYLNLSCNRITRDGAKELSKLLR----------KDTALKVIDLSFNRLGDDGAID 251

Query: 313 LAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
           +A       T L+ + +  N I   G+ AL++A + N  L      DN   +      G 
Sbjct: 252 IAEALMTFNTNLQTLVITSNEIRAKGLCALANALQMNSTL------DNIYIW------GN 299

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            L +   +A   L D    +   + +  Y+ D TT
Sbjct: 300 CLEEPACIAFAGLIDSGRIALKNTDVEPYVVDGTT 334



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 15/148 (10%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLN---------DNTITYKGAIPLGQA 61
           TLE +++    +    + AL+     N  L+ LN N         + T+ +   + + ++
Sbjct: 118 TLEELDLGDTDLTTDCVIALATVLRANSTLKSLNANRPILFSHQEETTVHFANMLKVNRS 177

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +L      +L    ++  G + +++ L DN TL  +NL+CN I+  G  +L K ++  
Sbjct: 178 LKEL------HLMKYDMRDFGITRLSEKLVDNMTLTYLNLSCNRITRDGAKELSKLLRKD 231

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSF 149
           T LK I++S N+ G++G  ++ + + +F
Sbjct: 232 TALKVIDLSFNRLGDDGAIDIAEALMTF 259



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 1/152 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A + K  ++L+ + + +  +   GIT LS+   +N  L +LNL+ N IT  GA  L + 
Sbjct: 168 FANMLKVNRSLKELHLMKYDMRDFGITRLSEKLVDNMTLTYLNLSCNRITRDGAKELSKL 227

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L K  +L +++L    L   GA  IA+ L T NT L+ + +T NEI  +G   L  A++ 
Sbjct: 228 LRKDTALKVIDLSFNRLGDDGAIDIAEALMTFNTNLQTLVITSNEIRAKGLCALANALQM 287

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
            + L  I +  N   E        L+ S  +A
Sbjct: 288 NSTLDNIYIWGNCLEEPACIAFAGLIDSGRIA 319



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 6/152 (3%)

Query: 297 VFIAGRN------RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
           +++AG N      RL++  A+++    +    +  +++  N I  VG   ++   EE   
Sbjct: 3   LYLAGNNKLITNVRLDDAQAEIIYKWLRNNIFVTALDLRYNNITDVGSKHIAKLLEETAT 62

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           L  LNL +N I  +GA  + QAL K  +L  L +    +   G    A+ L  NTTLE++
Sbjct: 63  LEELNLMNNDIGEEGAKDIAQALLKNETLKKLRMSGNKIGFKGGMCFAQTLQINTTLEEL 122

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
           +L   +++    + L   ++  + LK +N + 
Sbjct: 123 DLGDTDLTTDCVIALATVLRANSTLKSLNANR 154



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 5   VFKKLKT---LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++K L+    +  +++  N I  VG   ++   EE   L  LNL +N I  +GA  + QA
Sbjct: 25  IYKWLRNNIFVTALDLRYNNITDVGSKHIAKLLEETATLEELNLMNNDIGEEGAKDIAQA 84

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L K  +L  L +    +   G    A+ L  NTTLE+++L   +++    + L   ++  
Sbjct: 85  LLKNETLKKLRMSGNKIGFKGGMCFAQTLQINTTLEELDLGDTDLTTDCVIALATVLRAN 144

Query: 122 TKLKQINVSE 131
           + LK +N + 
Sbjct: 145 STLKSLNANR 154



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 31/177 (17%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + ++  TLE + +  N I   G   ++ A  +N+ L+ L ++ N I +KG +   Q 
Sbjct: 53  IAKLLEETATLEELNLMNNDIGEEGAKDIAQALLKNETLKKLRMSGNKIGFKGGMCFAQT 112

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT---------------CNEI 106
           L    +L  L+LGD  L +    ++A  L  N+TL+ +N                  N +
Sbjct: 113 LQINTTLEELDLGDTDLTTDCVIALATVLRANSTLKSLNANRPILFSHQEETTVHFANML 172

Query: 107 SVQGGLDLVKAMKNKTK----------------LKQINVSENQFGEEGVEEMEKLMK 147
            V   L  +  MK   +                L  +N+S N+   +G +E+ KL++
Sbjct: 173 KVNRSLKELHLMKYDMRDFGITRLSEKLVDNMTLTYLNLSCNRITRDGAKELSKLLR 229


>gi|320164173|gb|EFW41072.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 295

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 43/269 (15%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L EL L  N  G +G   +A  L  S    L  L L +N +G  G + LS+A+
Sbjct: 38  ALQVNQTLKELSLYHNQIGDVGALAIAQAL--SVNKKLTTLNLGDNQIGSAGAQALSQAI 95

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      S LA ++++   N+++N+GA  +A   K   +L  + + QN I + G  
Sbjct: 96  -----------STLA-RLYLH-ENQIDNDGALAIANALKVSNSLTFLNLHQNQIGNAGAQ 142

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI-- 397
           AL++A   NK L  ++L+ N I   GA  +G+AL    +LA+L LG   +  AGA +I  
Sbjct: 143 ALAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNKALAVLGLGSNQIGDAGAQAIGE 202

Query: 398 -----------------------AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 434
                                   + L  + TL  + L  N I V G L L +A+K    
Sbjct: 203 ANPKLIVLSLRQNKIGDAGAHALGRALQASKTLTGLILEENFIGVAGALALAEAIKVTKT 262

Query: 435 LKQINVSENQFGEEG---VEEMEKLMKSF 460
           L ++ +  N  G+ G   ++E  K+ KS 
Sbjct: 263 LTRLVLISNPVGDVGAQAIDEARKVNKSL 291



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 142/348 (40%), Gaps = 73/348 (20%)

Query: 15  VEMPQNGIYHVG--------ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
           V+   NG  ++G        + A+++A + N+ L+ L+L  N I   GA+ + QALS   
Sbjct: 12  VKSATNGTLYLGGRQIDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNK 71

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            L  LNLGD  + SAGA ++++ +   +TL  + L  N+I   G L +  A+K    L  
Sbjct: 72  KLTTLNLGDNQIGSAGAQALSQAI---STLARLYLHENQIDNDGALAIANALKVSNSLTF 128

Query: 127 INVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           +N+ +NQ G  G + +                                      AE  + 
Sbjct: 129 LNLHQNQIGNAGAQAL--------------------------------------AEALSV 150

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLA 246
           N +  D    H + NQ  ++  ++   +      LK    L  L L  N  G  G + + 
Sbjct: 151 NKALTD---IHLSGNQIGDDGARAIGEA------LKVNKALAVLGLGSNQIGDAGAQAIG 201

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
           +         L  L L  N +G  G   L +AL    ++SK       L   I   N + 
Sbjct: 202 E-----ANPKLIVLSLRQNKIGDAGAHALGRAL----QASKT------LTGLILEENFIG 246

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
             GA  LA   K  KTL R+ +  N +  VG  A+ +A + NK+L  L
Sbjct: 247 VAGALALAEAIKVTKTLTRLVLISNPVGDVGAQAIDEARKVNKSLTVL 294



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 26/182 (14%)

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           +++ GR +++ +  + +A   +  +TL+ + +  N I  VG  A++ A   NK L  LNL
Sbjct: 20  LYLGGR-QIDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNKKLTTLNL 78

Query: 357 NDNTITYKGAIPLGQALSKLP-------------------------SLAILNLGDCLLKS 391
            DN I   GA  L QA+S L                          SL  LNL    + +
Sbjct: 79  GDNQIGSAGAQALSQAISTLARLYLHENQIDNDGALAIANALKVSNSLTFLNLHQNQIGN 138

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           AGA ++A+ L+ N  L D++L+ N+I   G   + +A+K    L  + +  NQ G+ G +
Sbjct: 139 AGAQALAEALSVNKALTDIHLSGNQIGDDGARAIGEALKVNKALAVLGLGSNQIGDAGAQ 198

Query: 452 EM 453
            +
Sbjct: 199 AI 200



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 3/138 (2%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL+ + +  N I  VG  A++ A   NKKL  LNL DN I   GA  L QA+S   +LA
Sbjct: 43  QTLKELSLYHNQIGDVGALAIAQALSVNKKLTTLNLGDNQIGSAGAQALSQAIS---TLA 99

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L +  + + GA +IA  L  + +L  +NL  N+I   G   L +A+     L  I++
Sbjct: 100 RLYLHENQIDNDGALAIANALKVSNSLTFLNLHQNQIGNAGAQALAEALSVNKALTDIHL 159

Query: 130 SENQFGEEGVEEMEKLMK 147
           S NQ G++G   + + +K
Sbjct: 160 SGNQIGDDGARAIGEALK 177



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 11/137 (8%)

Query: 325 RVEMPQNGIYHVG--------ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
           +V+   NG  ++G        + A+++A + N+ L+ L+L  N I   GA+ + QALS  
Sbjct: 11  KVKSATNGTLYLGGRQIDADEVQAIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVN 70

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
             L  LNLGD  + SAGA ++++ +   +TL  + L  N+I   G L +  A+K    L 
Sbjct: 71  KKLTTLNLGDNQIGSAGAQALSQAI---STLARLYLHENQIDNDGALAIANALKVSNSLT 127

Query: 437 QINVSENQFGEEGVEEM 453
            +N+ +NQ G  G + +
Sbjct: 128 FLNLHQNQIGNAGAQAL 144



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 129/313 (41%), Gaps = 65/313 (20%)

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           +IA+ L  N TL++++L  N+I   G L + +A+    KL  +N+ +NQ G  G + + +
Sbjct: 34  AIAEALQVNQTLKELSLYHNQIGDVGALAIAQALSVNKKLTTLNLGDNQIGSAGAQALSQ 93

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSH 204
            + +    A L L              E++ +ND      N                   
Sbjct: 94  AISTL---ARLYL-------------HENQIDNDGALAIAN------------------- 118

Query: 205 NNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
                          +LK    L  L+L  N  G  G + LA+ L  S   AL ++ L+ 
Sbjct: 119 ---------------ALKVSNSLTFLNLHQNQIGNAGAQALAEAL--SVNKALTDIHLSG 161

Query: 265 NGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
           N +G  G + + +AL    + +K      AL V   G N++ + GA+ +     KL  L 
Sbjct: 162 NQIGDDGARAIGEAL----KVNK------ALAVLGLGSNQIGDAGAQAIGEANPKLIVL- 210

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
              + QN I   G  AL  A + +K L  L L +N I   GA+ L +A+    +L  L L
Sbjct: 211 --SLRQNKIGDAGAHALGRALQASKTLTGLILEENFIGVAGALALAEAIKVTKTLTRLVL 268

Query: 385 GDCLLKSAGASSI 397
               +   GA +I
Sbjct: 269 ISNPVGDVGAQAI 281



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 6/143 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K L  + +  N I   G  A+ +A + NK L  L L  N I   GA  +G+A    P L 
Sbjct: 152 KALTDIHLSGNQIGDDGARAIGEALKVNKALAVLGLGSNQIGDAGAQAIGEAN---PKLI 208

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           +L+L    +  AGA ++ + L  + TL  + L  N I V G L L +A+K    L ++ +
Sbjct: 209 VLSLRQNKIGDAGAHALGRALQASKTLTGLILEENFIGVAGALALAEAIKVTKTLTRLVL 268

Query: 130 SENQFGEEG---VEEMEKLMKSF 149
             N  G+ G   ++E  K+ KS 
Sbjct: 269 ISNPVGDVGAQAIDEARKVNKSL 291


>gi|154340573|ref|XP_001566243.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063562|emb|CAM39744.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 779

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 18/200 (9%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L  L L  N  G+ G   L +A+ D         +P  ++    G+N L+++ A ++   
Sbjct: 68  LRVLVLEENSFGLPGVTALMEAIED---------NPSHIRELRLGKNNLKDQAAVVIGHT 118

Query: 317 FKK----LKTLERVEMPQNGIYHVGITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQ 371
             +    LK L+   + +N I  +G+  ++ A ++    +  L+ ++N I    A+ L Q
Sbjct: 119 LSRNGCGLKVLD---LSENNITKLGVIPIAAALQQPFSEIVELSFHNNKIECDAALYLSQ 175

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
           AL   P L  L+LG   L+  GA+ IA+ L   + L  ++LT N IS +GG +L +A+  
Sbjct: 176 ALRAAPKLKHLHLGYNALRDNGAAQIARSLPHASCLSTLDLTANRISREGGEELARALMT 235

Query: 432 KT-KLKQINVSENQFGEEGV 450
            T  ++++N+  NQ   E +
Sbjct: 236 PTCTVQRLNLRHNQLDSETI 255



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 2/130 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ +++ +N I  +G+  ++ A ++   ++  L+ ++N I    A+ L QAL   P L  
Sbjct: 126 LKVLDLSENNITKLGVIPIAAALQQPFSEIVELSFHNNKIECDAALYLSQALRAAPKLKH 185

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINV 129
           L+LG   L+  GA+ IA+ L   + L  ++LT N IS +GG +L +A+   T  ++++N+
Sbjct: 186 LHLGYNALRDNGAAQIARSLPHASCLSTLDLTANRISREGGEELARALMTPTCTVQRLNL 245

Query: 130 SENQFGEEGV 139
             NQ   E +
Sbjct: 246 RHNQLDSETI 255


>gi|291239438|ref|XP_002739630.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1748

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 35/250 (14%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
            ++K    +  LDLS N+ G +G+  + ++LR +    L EL+LN  G       + S AL
Sbjct: 1426 AMKQNQTVTSLDLSYNSIGEVGIAEVGNVLRINT--TLNELQLNRIGFDEHSIMVFSDAL 1483

Query: 280  HDCYESSKKEGSPLALKVFIAGRNRLENE---------GAKMLAAVFKKL--KT-LERVE 327
                                 GRNR   +         G  ++  +   L  KT LE ++
Sbjct: 1484 ---------------------GRNRGLRKLYLKECGVWGRALIVPLVNALCHKTDLELLD 1522

Query: 328  MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
            +  N I   GI  L D  + +  ++HL+L+ N I+      L Q L  +P L  L L   
Sbjct: 1523 LSLNAIADDGIVILMDVLQHSNQMKHLDLSVNKISDISIQSLAQGLLAMPQLQALLLQLN 1582

Query: 388  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
             + S GA  IA  L   T L+ ++L  N+I  +G   + K++KN   L+ +N+ +N  G 
Sbjct: 1583 DITSRGARVIASLLPRLTQLKRLDLEKNKIGDKGVTWVAKSLKNHPNLRVVNLCDNDIGN 1642

Query: 448  EGVEEMEKLM 457
             G + M +++
Sbjct: 1643 SGAKSMAEVL 1652



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 23/209 (11%)

Query: 230  LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
            LDLS NA    G+  L D+L+ S    ++ L L+ N +     + L++ L          
Sbjct: 1521 LDLSLNAIADDGIVILMDVLQHSN--QMKHLDLSVNKISDISIQSLAQGL---------- 1568

Query: 290  GSPLAL---KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
               LA+   +  +   N + + GA+++A++  +L  L+R+++ +N I   G+T ++ + +
Sbjct: 1569 ---LAMPQLQALLLQLNDITSRGARVIASLLPRLTQLKRLDLEKNKIGDKGVTWVAKSLK 1625

Query: 347  ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL-GDC----LLKSAGASSIAKYL 401
             + NLR +NL DN I   GA  + + L   P++  L L GD      + + G  +I++ L
Sbjct: 1626 NHPNLRVVNLCDNDIGNSGAKSMAEVLHINPTITHLKLCGDVRQTNYIDNEGVWNISRAL 1685

Query: 402  TDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
              N TL  ++ T   I  +G + L  A++
Sbjct: 1686 ATNRTLLYLDFTRQHIGNEGAMALANALE 1714



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 9/189 (4%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            LE +++  N I   GI  L D  + + +++HL+L+ N I+      L Q L  +P L  L
Sbjct: 1518 LELLDLSLNAIADDGIVILMDVLQHSNQMKHLDLSVNKISDISIQSLAQGLLAMPQLQAL 1577

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
             L    + S GA  IA  L   T L+ ++L  N+I  +G   + K++KN   L+ +N+ +
Sbjct: 1578 LLQLNDITSRGARVIASLLPRLTQLKRLDLEKNKIGDKGVTWVAKSLKNHPNLRVVNLCD 1637

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEE---NDSDAEGDNSNL 188
            N  G  G + M +++        L L      C D  Q    + E   N S A   N  L
Sbjct: 1638 NDIGNSGAKSMAEVLHINPTITHLKL------CGDVRQTNYIDNEGVWNISRALATNRTL 1691

Query: 189  SHNDSNHSH 197
             + D    H
Sbjct: 1692 LYLDFTRQH 1700



 Score = 39.3 bits (90), Expect = 4.4,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 56/118 (47%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +L  V +    ++H+++  N I  + I +L+       +L+ L L  N IT +GA  +  
Sbjct: 1535 ILMDVLQHSNQMKHLDLSVNKISDISIQSLAQGLLAMPQLQALLLQLNDITSRGARVIAS 1594

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
             L +L  L  L+L    +   G + +AK L ++  L  VNL  N+I   G   + + +
Sbjct: 1595 LLPRLTQLKRLDLEKNKIGDKGVTWVAKSLKNHPNLRVVNLCDNDIGNSGAKSMAEVL 1652


>gi|320169160|gb|EFW46059.1| hypothetical protein CAOG_04027 [Capsaspora owczarzaki ATCC 30864]
          Length = 437

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 1/157 (0%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           ++L+   A+++AA  K   T+E V++ QN I   G+ A+++A   N  + HL L  N I 
Sbjct: 30  DKLDVAEAQVIAAALKVHATIEDVQLDQNQIGDTGLQAIAEALTVNTTVTHLGLQLNQIG 89

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQG 421
             GA  L +AL    +L  L+L    +   GA +IA+ L  N TTL ++ L  N+I   G
Sbjct: 90  DAGAQALAEALKVSKTLIWLDLNKNQIGDVGAGAIAEALKVNTTTLTELFLGWNQIGDAG 149

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              + +A++  T L  +++  NQ G+ G + + + +K
Sbjct: 150 AQAIAEALRVTTTLTFLDLRRNQIGDAGAQAIAEALK 186



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 1/148 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++AA  K   T+E V++ QN I   G+ A+++A   N  + HL L  N I   GA  L +
Sbjct: 39  VIAAALKVHATIEDVQLDQNQIGDTGLQAIAEALTVNTTVTHLGLQLNQIGDAGAQALAE 98

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMK 119
           AL    +L  L+L    +   GA +IA+ L  N TTL ++ L  N+I   G   + +A++
Sbjct: 99  ALKVSKTLIWLDLNKNQIGDVGAGAIAEALKVNTTTLTELFLGWNQIGDAGAQAIAEALR 158

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
             T L  +++  NQ G+ G + + + +K
Sbjct: 159 VTTTLTFLDLRRNQIGDAGAQAIAEALK 186


>gi|326430769|gb|EGD76339.1| hypothetical protein PTSG_11676 [Salpingoeca sp. ATCC 50818]
          Length = 445

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 14/225 (6%)

Query: 235 NAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLA 294
           N  GP G + LA  L+   C +L  +KLNN  LG  G   ++ +L +       E     
Sbjct: 86  NPIGPDGGQYLATALKQ--CLSLNTVKLNNCALGDNGAIAIANSLVNNDHIVTLE----- 138

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
                 G N + ++ A+  +  F++   LE + + +N I   G   L++    N+ L+ L
Sbjct: 139 -----LGNNLIGDQAARAFSRAFERNDCLEGLSLWKNAILSAGAQYLAEGLTRNRTLQWL 193

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLT 413
            L  N I   GA+   Q L  +  +  L LG   L   G   IA  L D+   L+ + L 
Sbjct: 194 GLGGNKIGPDGALSFAQQLGHM-RIHWLGLGGNSLTDQGIIYIASALKDDGCDLQSIGLG 252

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            N I+  G   L +A+   T+L+ + +  N+   EG E   ++++
Sbjct: 253 GNGITDHGVEKLARALWTNTRLESLGLGGNEISTEGCEFFSEMLR 297



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 108/233 (46%), Gaps = 10/233 (4%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           ELD +D+  G   ++ +A+ L  +   ++ ++ L+   +   G + +S AL         
Sbjct: 21  ELDFTDSNLGDAKLQKVAEALHKNS--SVRKINLSGTNMSDIGARYISDAL-------AH 71

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
           + +P  +   I  +N +  +G + LA   K+  +L  V++    +   G  A++++   N
Sbjct: 72  KLTPTNVTTIIFDKNPIGPDGGQYLATALKQCLSLNTVKLNNCALGDNGAIAIANSLVNN 131

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
            ++  L L +N I  + A    +A  +   L  L+L    + SAGA  +A+ LT N TL+
Sbjct: 132 DHIVTLELGNNLIGDQAARAFSRAFERNDCLEGLSLWKNAILSAGAQYLAEGLTRNRTLQ 191

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
            + L  N+I   G L   + + +  ++  + +  N   ++G+  +   +K  G
Sbjct: 192 WLGLGGNKIGPDGALSFAQQLGH-MRIHWLGLGGNSLTDQGIIYIASALKDDG 243



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 6/166 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +  F++   LE + + +N I   G   L++    N+ L+ L L  N I   GA+   Q 
Sbjct: 152 FSRAFERNDCLEGLSLWKNAILSAGAQYLAEGLTRNRTLQWLGLGGNKIGPDGALSFAQQ 211

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  +  +  L LG   L   G   IA  L D+   L+ + L  N I+  G   L +A+  
Sbjct: 212 LGHM-RIHWLGLGGNSLTDQGIIYIASALKDDGCDLQSIGLGGNGITDHGVEKLARALWT 270

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE----DDEG 162
            T+L+ + +  N+   EG E   ++++       L+L     DD+G
Sbjct: 271 NTRLESLGLGGNEISTEGCEFFSEMLRVNTTLKKLILSSNLVDDDG 316



 Score = 45.1 bits (105), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 12/184 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           R+  L L  N+    G+  +A  L+   C  L+ + L  NG+   G + L++AL   + +
Sbjct: 216 RIHWLGLGGNSLTDQGIIYIASALKDDGC-DLQSIGLGGNGITDHGVEKLARAL---WTN 271

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
           ++ E   L       G N +  EG +  + + +   TL+++ +  N +   G+ AL+D  
Sbjct: 272 TRLESLGL-------GGNEISTEGCEFFSEMLRVNTTLKKLILSSNLVDDDGLRALADGL 324

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDN 404
             N  L  L +  N  T  GA+ L   L +  + L +L++ D  +  AG   +   L  +
Sbjct: 325 TVNNTLETLLVAANPFTDVGALYLADILCRSNTCLQVLDIHDADMSPAGEQQVVDQLRKD 384

Query: 405 TTLE 408
           ++L 
Sbjct: 385 SSLH 388



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 1/149 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K+  +L  V++    +   G  A++++   N  +  L L +N I  + A    +A
Sbjct: 96  LATALKQCLSLNTVKLNNCALGDNGAIAIANSLVNNDHIVTLELGNNLIGDQAARAFSRA 155

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
             +   L  L+L    + SAGA  +A+ LT N TL+ + L  N+I   G L   + + + 
Sbjct: 156 FERNDCLEGLSLWKNAILSAGAQYLAEGLTRNRTLQWLGLGGNKIGPDGALSFAQQLGH- 214

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFG 150
            ++  + +  N   ++G+  +   +K  G
Sbjct: 215 MRIHWLGLGGNSLTDQGIIYIASALKDDG 243



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 14/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     +V L+L +N  G       +     + C  LE L L  N +   G + L++ L
Sbjct: 127 SLVNNDHIVTLELGNNLIGDQAARAFSRAFERNDC--LEGLSLWKNAILSAGAQYLAEGL 184

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                +  +    L L     G N++  +GA   A     ++ +  + +  N +   GI 
Sbjct: 185 -----TRNRTLQWLGL-----GGNKIGPDGALSFAQQLGHMR-IHWLGLGGNSLTDQGII 233

Query: 340 ALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            ++ A +++  +L+ + L  N IT  G   L +AL     L  L LG   + + G    +
Sbjct: 234 YIASALKDDGCDLQSIGLGGNGITDHGVEKLARALWTNTRLESLGLGGNEISTEGCEFFS 293

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           + L  NTTL+ + L+ N +   G   L   +     L+ + V+ N F + G   +  ++
Sbjct: 294 EMLRVNTTLKKLILSSNLVDDDGLRALADGLTVNNTLETLLVAANPFTDVGALYLADIL 352


>gi|260813625|ref|XP_002601517.1| hypothetical protein BRAFLDRAFT_95757 [Branchiostoma floridae]
 gi|229286815|gb|EEN57529.1| hypothetical protein BRAFLDRAFT_95757 [Branchiostoma floridae]
          Length = 291

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 58/86 (67%)

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           ++N GDCLL+S GA +IAK ++ N  L+++ L+ NEI     + + +A++ K  LK++++
Sbjct: 6   VINFGDCLLRSGGAEAIAKAISSNQYLKELILSYNEIRKDAAILVAEAVEGKEHLKKLDL 65

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAAL 155
           + NQ GEEG+EE+   +++F M   L
Sbjct: 66  NGNQLGEEGIEELSGTLEAFDMVDVL 91



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 58/86 (67%)

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
           ++N GDCLL+S GA +IAK ++ N  L+++ L+ NEI     + + +A++ K  LK++++
Sbjct: 6   VINFGDCLLRSGGAEAIAKAISSNQYLKELILSYNEIRKDAAILVAEAVEGKEHLKKLDL 65

Query: 441 SENQFGEEGVEEMEKLMKSFGMAAAL 466
           + NQ GEEG+EE+   +++F M   L
Sbjct: 66  NGNQLGEEGIEELSGTLEAFDMVDVL 91


>gi|198431315|ref|XP_002120110.1| PREDICTED: similar to predicted protein isoform 2 [Ciona
           intestinalis]
          Length = 485

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 17/259 (6%)

Query: 196 SHNASNQSHNNSNQSH-----NTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
           S+  ++  H   N SH     N +      L     ++EL++ DN     G+  +AD+L 
Sbjct: 88  SYFVTHLQHEVMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLM 147

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +C  ++  L +++N LG  G + + + L +             L+     RN  ++   
Sbjct: 148 ENCYISI--LNISHNKLGSEGARYVGEMLQEN----------TTLRTLNISRNDFKDSDG 195

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           +  A   ++   L+ +++  N    +G   +  A   N+ +  LNL+ N +  KGA+ + 
Sbjct: 196 QYFAEALRQNFRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVC 255

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             +    ++  L+L        GA ++ + L  N TL  ++L+ N IS +G   L K ++
Sbjct: 256 AGMKSNITVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLE 315

Query: 431 NKTKLKQINVSENQFGEEG 449
               L+ + + +N FGEEG
Sbjct: 316 VNDTLRTLRIGDNPFGEEG 334



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%)

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
           E + M  +G+   G  A++     N ++  LN+ DN IT +G   +   L +   ++ILN
Sbjct: 97  EVMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLMENCYISILN 156

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           +    L S GA  + + L +NTTL  +N++ N+     G    +A++   +LK++++S N
Sbjct: 157 ISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGN 216

Query: 444 QFGEEGVEEM 453
           +F E G E M
Sbjct: 217 EFCELGGEWM 226



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E + M  +G+   G  A++     N  +  LN+ DN IT +G   +   L +   ++ILN
Sbjct: 97  EVMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLMENCYISILN 156

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           +    L S GA  + + L +NTTL  +N++ N+     G    +A++   +LK++++S N
Sbjct: 157 ISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGN 216

Query: 133 QFGEEGVEEM 142
           +F E G E M
Sbjct: 217 EFCELGGEWM 226



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 129/331 (38%), Gaps = 60/331 (18%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P    ++ L    ++N+    L   G  +IA  L  NT++ ++N+  N I+ +G  D
Sbjct: 83  GVVPASYFVTHLQH-EVMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRD 141

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           +   +     +  +N+S N+ G EG   +                   GE          
Sbjct: 142 IADMLMENCYISILNISHNKLGSEGARYV-------------------GEM--------- 173

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
                         L  N +  + N S     +S+  +        +L+   RL ELD+S
Sbjct: 174 --------------LQENTTLRTLNISRNDFKDSDGQYFAE-----ALRQNFRLKELDIS 214

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            N F  +G E +   + ++   A+E L L+ N L + G   +   +           S +
Sbjct: 215 GNEFCELGGEWMGQAIAANE--AIETLNLSWNHLRLKGALAVCAGMK----------SNI 262

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
            +K      N   +EGA  +    K   TL  +++  N I   G+T L+   E N  LR 
Sbjct: 263 TVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRT 322

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
           L + DN    +GA+ L  A+ K    AI +L
Sbjct: 323 LRIGDNPFGEEGALLLINAIFKNEKSAIEDL 353



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 111/227 (48%), Gaps = 14/227 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL-HDCYESSKK 288
           +++S +  GP G + +A  L  +   ++ EL + +N +   G + ++  L  +CY     
Sbjct: 99  MNMSHHGLGPNGTKAIAAPLVINT--SILELNIEDNWITAEGMRDIADMLMENCY----- 151

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
                 + +     N+L +EGA+ +  + ++  TL  + + +N          ++A  +N
Sbjct: 152 ------ISILNISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQN 205

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L+ L+++ N     G   +GQA++   ++  LNL    L+  GA ++   +  N T++
Sbjct: 206 FRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVK 265

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            ++L+ N  + +G + + +A+K    L  +++S N+  ++G+  + K
Sbjct: 266 TLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAK 312



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N    +G   +  A   N+ +  LNL+ N +  KGA+ +   +    ++  L
Sbjct: 208 LKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTL 267

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L        GA ++ + L  N TL  ++L+ N IS +G   L K ++    L+ + + +
Sbjct: 268 DLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGD 327

Query: 132 NQFGEEG 138
           N FGEEG
Sbjct: 328 NPFGEEG 334



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 18/206 (8%)

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN----EGAKML 313
           E + ++++GLG  G K ++              +PL +   I   N  +N    EG + +
Sbjct: 97  EVMNMSHHGLGPNGTKAIA--------------APLVINTSILELNIEDNWITAEGMRDI 142

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A +  +   +  + +  N +   G   + +  +EN  LR LN++ N           +AL
Sbjct: 143 ADMLMENCYISILNISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEAL 202

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            +   L  L++        G   + + +  N  +E +NL+ N + ++G L +   MK+  
Sbjct: 203 RQNFRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNI 262

Query: 434 KLKQINVSENQFGEEGVEEMEKLMKS 459
            +K +++S N F +EG   M + +K+
Sbjct: 263 TVKTLDLSWNGFADEGAMAMGEALKT 288



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           + H ++   G  +VG     +  +EN  LR LN++ N           +AL +   L  L
Sbjct: 157 ISHNKLGSEGARYVG-----EMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKEL 211

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           ++        G   + + +  N  +E +NL+ N + ++G L +   MK+   +K +++S 
Sbjct: 212 DISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSW 271

Query: 132 NQFGEEGVEEMEKLMKS 148
           N F +EG   M + +K+
Sbjct: 272 NGFADEGAMAMGEALKT 288



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 69/134 (51%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + + +N          ++A  +N +L+ L+++ N     G   +GQA++   ++  
Sbjct: 179 TLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEWMGQAIAANEAIET 238

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    L+  GA ++   +  N T++ ++L+ N  + +G + + +A+K    L  +++S
Sbjct: 239 LNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLS 298

Query: 131 ENQFGEEGVEEMEK 144
            N+  ++G+  + K
Sbjct: 299 FNRISDKGLTMLAK 312



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +E + +  N +   G  A+    + N  ++ L+L+ N    +GA+ +G+AL    +L  L
Sbjct: 236 IETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAMAMGEALKTNNTLVWL 295

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN-KTKLKQINV 129
           +L    +   G + +AK L  N TL  + +  N    +G L L+ A+ KN K+ ++ +++
Sbjct: 296 DLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEGALLLINAIFKNEKSAIEDLDL 355

Query: 130 SENQFGEEGVEEMEKL 145
              +   E +E  EKL
Sbjct: 356 KSVRVNREFLELAEKL 371


>gi|407397668|gb|EKF27841.1| hypothetical protein MOQ_008425 [Trypanosoma cruzi marinkellei]
          Length = 284

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 15/211 (7%)

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           ++C   L  + L+ N +G  G K L +++         + +PL +   +A  N++ + G 
Sbjct: 5   AACHRDLTSVDLSWNNVGPLGTKSLLRSM---------QRNPLCVYHLMA--NKIGDAGT 53

Query: 311 KMLAAVFKKL--KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
             L    ++   K    + + +N + H G  A+    E N+ L  ++L+ NT+  KG   
Sbjct: 54  TCLCEAMQRFAGKGTTTLNLFRNDVRHKGCEAVGRLLENNEYLLDVSLHSNTLGLKGMQV 113

Query: 369 LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLV 426
           L Q  +  P+ +  LN+G+C+L   GA   A  +T N  TLE +NL  N  S  GG+ +V
Sbjct: 114 LRQHFTAAPNRVRSLNVGNCMLGDEGAPEAAALITANLPTLERLNLENNGFSDDGGVIIV 173

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           KA+   T L  ++ ++N FG + V+   +L+
Sbjct: 174 KALVKNTFLVMVSCADNTFGTKTVDATAELI 204



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCL 77
           +N + H G  A+    E N+ L  ++L+ NT+  KG   L Q  +  P+ +  LN+G+C+
Sbjct: 75  RNDVRHKGCEAVGRLLENNEYLLDVSLHSNTLGLKGMQVLRQHFTAAPNRVRSLNVGNCM 134

Query: 78  LKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
           L   GA   A  +T N  TLE +NL  N  S  GG+ +VKA+   T L  ++ ++N FG 
Sbjct: 135 LGDEGAPEAAALITANLPTLERLNLENNGFSDDGGVIIVKALVKNTFLVMVSCADNTFGT 194

Query: 137 EGVEEMEKLM 146
           + V+   +L+
Sbjct: 195 KTVDATAELI 204


>gi|146178483|ref|XP_001020367.2| hypothetical protein TTHERM_00797810 [Tetrahymena thermophila]
 gi|146144603|gb|EAS00122.2| hypothetical protein TTHERM_00797810 [Tetrahymena thermophila
           SB210]
          Length = 453

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 179/475 (37%), Gaps = 101/475 (21%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLN--DNTITYKGAIPLGQALSKLPSLA-- 69
            + +   GI   G++ L     +   L +L L+  ++ I  +GA  LG AL+K   L+  
Sbjct: 26  RIYLSDIGIGDEGVSGLGSGLAKCINLSNLTLDLRNSKIGDEGASGLGSALAKCIDLSNL 85

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL--TCNEISVQGGLDLVKAMKNKTKLKQI 127
            L+LG   +   GAS +   L     L ++ L  T N+IS  G L L  A+     L  +
Sbjct: 86  TLDLGWNQIGDEGASGLCSGLAKCINLSNLTLYLTKNKISAMGALGLGSALAKCINLSNL 145

Query: 128 --NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
             N+S NQ G+EG   +   +      + L L   E E  D+   +              
Sbjct: 146 TLNLSWNQIGDEGASGLGSALAKCINLSNLTLYLSENEIGDQSASDLGSAL--------- 196

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
                                     N +N S+++L  GA         N  G IG  GL
Sbjct: 197 -------------------------ANCTNLSNLTLNLGA---------NQIGAIGASGL 222

Query: 246 ADLLRSSCCFALEELKLN--NNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
              L +  C  L  L L+  NN +G  G   L  AL +C   S            I G N
Sbjct: 223 GSALVN--CRNLSNLTLDLGNNQIGDQGTSGLGSALANCTNLSNL--------TLILGSN 272

Query: 304 RLENEGAKMLAAVFKKLKTLERV--EMPQNGIYHVGITALSDAFEENKNLRHLNLN--DN 359
           ++ NEGA  L         L  +  ++  N I  +G++ L  A     NL +L L   +N
Sbjct: 273 KIGNEGAPGLGPALANCTNLSNLTLDLSFNNIGAIGVSCLGSALATCTNLTNLTLELYEN 332

Query: 360 TITYKGAIPLGQALSKLPSLAILNL----------GDCLLKSA----------------- 392
            I  +GA  LG AL+   +L+ L L          G   L SA                 
Sbjct: 333 QIGDEGASGLGSALANCSNLSKLALDLGLNQIGDEGASGLGSALANCSNLSKLTLELYLN 392

Query: 393 -----GASSIAKYLTDNTTLEDVNLTCNE--ISVQGGLDLVKAMKNKTKLKQINV 440
                GASS+   L   T L ++ L  NE  I  QG  DL  A+ + T L  + +
Sbjct: 393 QIGDEGASSLGSALATCTNLTNLTLYLNENEIGDQGSSDLCSALASCTNLSNLTL 447


>gi|344289378|ref|XP_003416420.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2-like [Loxodonta africana]
          Length = 1065

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 17/227 (7%)

Query: 228  VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG-CKLLSKALHDCYESS 286
            V L L  N+ G IGVE L       C    + L L +N +   G CKL+  ALH  +E  
Sbjct: 818  VALQLDYNSVGDIGVEQLL-----PCLGVCKALYLRDNNISDRGICKLIEHALH--FEQL 870

Query: 287  KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            +K      L +F    N+L +  A+ +A +  + +    + +  N I  VG   L+    
Sbjct: 871  QK------LALF---NNKLTDGCARSMAELLARKQNFLALRLGNNHITAVGAEVLAQGLR 921

Query: 347  ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            +N +L+ L    N +  KGA  L +ALS   SL  L+L    + S GA ++A+ L  N  
Sbjct: 922  DNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMV 981

Query: 407  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            LE++ L  N +  +G   L + +K  + LK + +S N     G E +
Sbjct: 982  LEELCLEENHLHDEGVCFLAEGLKRNSSLKVLKLSNNSITYAGAEAL 1028



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%)

Query: 20   NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
            N I  VG   L+    +N  L+ L    N +  KGA  L +ALS   SL  L+L    + 
Sbjct: 906  NHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLKWLSLVGNSIG 965

Query: 80   SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            S GA ++A+ L  N  LE++ L  N +  +G   L + +K  + LK + +S N     G 
Sbjct: 966  SVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEGLKRNSSLKVLKLSNNSITYAGA 1025

Query: 140  EEM 142
            E +
Sbjct: 1026 EAL 1028



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 13/215 (6%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +E LKL   G+G   C  L+ AL    +       P+AL++     N + + G + L   
Sbjct: 789 VEHLKLTFCGVGPAECAALAFALQHLRQ-------PVALQL---DYNSVGDIGVEQLLPC 838

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
               K L    +  N I   GI  L +     + L+ L L +N +T   A  + + L++ 
Sbjct: 839 LGVCKALY---LRDNNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMAELLARK 895

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            +   L LG+  + + GA  +A+ L DN +L+ +    N +  +G   L +A+ +   LK
Sbjct: 896 QNFLALRLGNNHITAVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLK 955

Query: 437 QINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
            +++  N  G  G + + ++++   +   L LE++
Sbjct: 956 WLSLVGNSIGSVGAQALARMLEKNMVLEELCLEEN 990



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 4/149 (2%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   GI  L +     ++L+ L L +N +T   A  + + L++  +   L LG+  + 
Sbjct: 850 NNISDRGICKLIEHALHFEQLQKLALFNNKLTDGCARSMAELLARKQNFLALRLGNNHIT 909

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           + GA  +A+ L DN +L+ +    N +  +G   L +A+ +   LK +++  N  G  G 
Sbjct: 910 AVGAEVLAQGLRDNCSLQFLGFWGNRVGDKGAQALAEALSDHQSLKWLSLVGNSIGSVGA 969

Query: 140 EEMEKLMKSFGMAAALVLED----DEGEC 164
           + + ++++   +   L LE+    DEG C
Sbjct: 970 QALARMLEKNMVLEELCLEENHLHDEGVC 998



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA      ++L+ + +  N I  VG  AL+   E+N  L  L L +N +  +G   L + 
Sbjct: 944  LAEALSDHQSLKWLSLVGNSIGSVGAQALARMLEKNMVLEELCLEENHLHDEGVCFLAEG 1003

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 107
            L +  SL +L L +  +  AGA ++ + L  N T+ +V L  N  S
Sbjct: 1004 LKRNSSLKVLKLSNNSITYAGAEALLQTLERNNTILEVWLRGNTFS 1049


>gi|357486129|ref|XP_003613352.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
 gi|355514687|gb|AES96310.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
          Length = 606

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 170/384 (44%), Gaps = 33/384 (8%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           + +AG  +    L  N TL+ ++L+ N +  +G   L   +   + ++++ ++    G+E
Sbjct: 211 ITAAGMKAFDGVLQSNITLKTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQLNSADLGDE 270

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G + + +++K       L L ++  E S       +  EN                    
Sbjct: 271 GAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLEN-------------------- 310

Query: 198 NASNQSHNNSNQSHNTS-NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
           N+    H N N       N    +L+    + EL L  N+ G  G+  L   L S     
Sbjct: 311 NSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKG-K 369

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L  L + NN L   G   ++  +       KK  S L L +++   N + +EGA+ LA  
Sbjct: 370 LTLLDIGNNSLTAKGAFYVAGYI-------KKIKSLLWLNIYM---NDIGDEGAEKLADA 419

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            K+ +++  ++M  N I+ VG+ A++   ++N  +  L L+ N I   GA  L + +   
Sbjct: 420 LKENRSITTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEVIKFH 479

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-L 435
            ++  L LG C + + GA  IA  L  NTT+  ++L  N +  +G L L +++K   + L
Sbjct: 480 GNVKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDEGALCLARSLKVVNEAL 539

Query: 436 KQINVSENQFGEEGVEEMEKLMKS 459
             +++  N+  ++G   + + +KS
Sbjct: 540 TSLDLGFNEIRDDGAFAIAQALKS 563



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 47/275 (17%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS+++LKT      LDLS N  G  G + L D+L  +    +E+L+LN+  LG  G K +
Sbjct: 224 QSNITLKT------LDLSGNPVGDEGAKCLCDILMGNST--IEKLQLNSADLGDEGAKAI 275

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           ++ L       KK  S   L+V     N +E  G   LA    +  ++  + +  N    
Sbjct: 276 AEML-------KKNSS---LRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGA 325

Query: 336 VGITALSDAFEENKNLRHLNLNDNTI-----------------------------TYKGA 366
           +G+ AL+ A E NK++R L+L+ N+I                             T KGA
Sbjct: 326 LGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDIGNNSLTAKGA 385

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             +   + K+ SL  LN+    +   GA  +A  L +N ++  +++  N I   G   + 
Sbjct: 386 FYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSITTLDMGGNNIHAVGVGAVA 445

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           K +K+ + +  + +S N  G +G + + +++K  G
Sbjct: 446 KVLKDNSVITTLELSYNPIGPDGAKALAEVIKFHG 480



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 167/404 (41%), Gaps = 38/404 (9%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E V    NGI   G+ A     + N  L+ L+L+ N +  +GA  L   L    ++  L 
Sbjct: 202 EEVSFAANGITAAGMKAFDGVLQSNITLKTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQ 261

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    L   GA +IA+ L  N++L  + L  N I   G   L  A+     ++ I+++ N
Sbjct: 262 LNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGN 321

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
             G  GV  + K +              EG  S  E         D       + L+   
Sbjct: 322 YGGALGVNALAKAL--------------EGNKSIRELHLHGNSIGDEGIRSLMTGLT--- 364

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGVEGLADLLR 250
              SH       +  N S       +++  +K    L+ L++  N  G  G E LAD L+
Sbjct: 365 ---SHKGKLTLLDIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALK 421

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +   ++  L +  N +   G   ++K L D    +  E S           N +  +GA
Sbjct: 422 ENR--SITTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELS----------YNPIGPDGA 469

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           K LA V K    ++ +++    I   G   ++DA + N  +  L+L  N +  +GA+ L 
Sbjct: 470 KALAEVIKFHGNVKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDEGALCLA 529

Query: 371 QALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           ++L  +  +L  L+LG   ++  GA +IA+ L  N   EDV +T
Sbjct: 530 RSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSN---EDVAVT 570



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K+ +++  ++M  N I+ VG+ A++   ++N  +  L L+ N I   GA  L + 
Sbjct: 416 LADALKENRSITTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEV 475

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +    ++  L LG C + + GA  IA  L  NTT+  ++L  N +  +G L L +++K  
Sbjct: 476 IKFHGNVKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDEGALCLARSLKVV 535

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKS 148
            + L  +++  N+  ++G   + + +KS
Sbjct: 536 NEALTSLDLGFNEIRDDGAFAIAQALKS 563



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 74/151 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N +   G K    V +   TL+ +++  N +   G   L D    N  +  L LN   + 
Sbjct: 209 NGITAAGMKAFDGVLQSNITLKTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQLNSADLG 268

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA  + + L K  SL +L L + +++ +G +S+A  L +N ++ +++L  N     G 
Sbjct: 269 DEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGALGV 328

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             L KA++    ++++++  N  G+EG+  +
Sbjct: 329 NALAKALEGNKSIRELHLHGNSIGDEGIRSL 359



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 68/132 (51%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +++  N +   G   L D    N  +  L LN   +  +GA  + + L K  SL +
Sbjct: 228 TLKTLDLSGNPVGDEGAKCLCDILMGNSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLRV 287

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L + +++ +G +S+A  L +N ++ +++L  N     G   L KA++    ++++++ 
Sbjct: 288 LELNNNMIEYSGFTSLAGALLENNSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHLH 347

Query: 131 ENQFGEEGVEEM 142
            N  G+EG+  +
Sbjct: 348 GNSIGDEGIRSL 359



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 11/152 (7%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAI---PL 58
           +A + KK  +L  +E+  N I + G T+L+ A  EN  +R+++LN N   Y GA+    L
Sbjct: 275 IAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGN---YGGALGVNAL 331

Query: 59  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT---TLEDVNLTCNEISVQGGLDLV 115
            +AL    S+  L+L    +   G  S+   LT +    TL D+    N ++ +G   + 
Sbjct: 332 AKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDIG--NNSLTAKGAFYVA 389

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
             +K    L  +N+  N  G+EG E++   +K
Sbjct: 390 GYIKKIKSLLWLNIYMNDIGDEGAEKLADALK 421


>gi|111226718|ref|XP_001134580.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|90970733|gb|EAS66896.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 624

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 13/239 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
            K    L E+ LS N     G   +A  L  SC  +L +L L+NN +G  G K + +AL 
Sbjct: 241 FKKNQSLQEIILSYNLLMEEGTIEMAKGLPYSC--SLIKLSLSNNEIGDLGAKEIGEAL- 297

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
               S  K  + L L+      N + ++G+  +    K  ++L  +++  N + + G   
Sbjct: 298 ----SQNKTITELDLRC-----NSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANG 348

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAILNLGDCLLKSAGASSIAK 399
           +  A E N+ ++ +NL  N+I  +G   +  ALS  L S+  ++L    L   G   I++
Sbjct: 349 IGKALETNQYIKSINLTRNSIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGTKEISR 408

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L+ N ++E++NL+ N+I   G   L K++     +K +N+S N  GE+G     +++K
Sbjct: 409 ALSFNRSIENINLSSNKIDSNGSKILCKSLLKNNTIKSLNLSMNDIGEQGCIYFYRVLK 467



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 116/231 (50%), Gaps = 13/231 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L     L++L LS+N  G +G + + + L  +    + EL L  N +G  G   + + L 
Sbjct: 269 LPYSCSLIKLSLSNNEIGDLGAKEIGEALSQNK--TITELDLRCNSIGSKGSNYICQYLK 326

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D         +   +++ + G N L N+GA  +    +  + ++ + + +N I   GI  
Sbjct: 327 D---------NRSLVEIDLWG-NSLGNDGANGIGKALETNQYIKSINLTRNSIQEQGIKF 376

Query: 341 LSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           +++A   +  ++  ++L+ N++T +G   + +ALS   S+  +NL    + S G+  + K
Sbjct: 377 ITNALSLSLCSIVTIDLSSNSLTLEGTKEISRALSFNRSIENINLSSNKIDSNGSKILCK 436

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            L  N T++ +NL+ N+I  QG +   + +K    L+ +N+S N+ G +G+
Sbjct: 437 SLLKNNTIKSLNLSMNDIGEQGCIYFYRVLKKSKNLEHLNLSLNKIGNKGL 487



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 39/230 (16%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
           K+  +L  L+L  N  G IG + LA         ALEE          +G KL    L  
Sbjct: 185 KSMKQLTHLNLFSNKIGDIGFKNLA--------MALEE----------SGSKLKFLGLSY 226

Query: 282 CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
           C + +K  G PL                      +FKK ++L+ + +  N +   G   +
Sbjct: 227 C-DLTKASGKPLC--------------------ELFKKNQSLQEIILSYNLLMEEGTIEM 265

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           +     + +L  L+L++N I   GA  +G+ALS+  ++  L+L    + S G++ I +YL
Sbjct: 266 AKGLPYSCSLIKLSLSNNEIGDLGAKEIGEALSQNKTITELDLRCNSIGSKGSNYICQYL 325

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            DN +L +++L  N +   G   + KA++    +K IN++ N   E+G++
Sbjct: 326 KDNRSLVEIDLWGNSLGNDGANGIGKALETNQYIKSINLTRNSIQEQGIK 375



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 17/260 (6%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  +FKK ++L+ + +  N +   G   ++     +  L  L+L++N I   GA  +G+A
Sbjct: 237 LCELFKKNQSLQEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDLGAKEIGEA 296

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           LS+  ++  L+L    + S G++ I +YL DN +L +++L  N +   G   + KA++  
Sbjct: 297 LSQNKTITELDLRCNSIGSKGSNYICQYLKDNRSLVEIDLWGNSLGNDGANGIGKALETN 356

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
             +K IN++ N   E+G++ +   + S  + + + ++      + E   E S      + 
Sbjct: 357 QYIKSINLTRNSIQEQGIKFITNAL-SLSLCSIVTIDLSSNSLTLEGTKEISRAL-SFNR 414

Query: 182 EGDNSNLSHN--DSNHSHN-ASNQSHNNSNQSHNTSNQS---------HMSLKTGARLVE 229
             +N NLS N  DSN S     +   NN+ +S N S            +  LK    L  
Sbjct: 415 SIENINLSSNKIDSNGSKILCKSLLKNNTIKSLNLSMNDIGEQGCIYFYRVLKKSKNLEH 474

Query: 230 LDLSDNAFGPIGVEGLADLL 249
           L+LS N    IG +GL +LL
Sbjct: 475 LNLSLN---KIGNKGLINLL 491



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 151/370 (40%), Gaps = 61/370 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           +  + K +K L H+ +  N I  +G   L+ A EE+  KL+ L L+   +T     PL +
Sbjct: 180 IEVIKKSMKQLTHLNLFSNKIGDIGFKNLAMALEESGSKLKFLGLSYCDLTKASGKPLCE 239

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
              K  SL  + L   LL   G   +AK L  + +L  ++L+ NEI   G  ++ +A+  
Sbjct: 240 LFKKNQSLQEIILSYNLLMEEGTIEMAKGLPYSCSLIKLSLSNNEIGDLGAKEIGEALSQ 299

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
              + ++++  N  G +G   + + +K      +LV           E D       +  
Sbjct: 300 NKTITELDLRCNSIGSKGSNYICQYLKD---NRSLV-----------EIDLWGNSLGNDG 345

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
           A G    L  N    S N +  S         T N   +SL     +V +DLS N+   +
Sbjct: 346 ANGIGKALETNQYIKSINLTRNSIQEQGIKFIT-NALSLSL---CSIVTIDLSSNS---L 398

Query: 241 GVEGLADLLRS-SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
            +EG  ++ R+ S   ++E + L++N +   G K+L K+L                    
Sbjct: 399 TLEGTKEISRALSFNRSIENINLSSNKIDSNGSKILCKSL-------------------- 438

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
                L+N              T++ + +  N I   G        +++KNL HLNL+ N
Sbjct: 439 -----LKNN-------------TIKSLNLSMNDIGEQGCIYFYRVLKKSKNLEHLNLSLN 480

Query: 360 TITYKGAIPL 369
            I  KG I L
Sbjct: 481 KIGNKGLINL 490



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 13/208 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L     + ELDL  N+ G  G   +   L+ +   +L E+ L  N LG  G   + KAL
Sbjct: 296 ALSQNKTITELDLRCNSIGSKGSNYICQYLKDN--RSLVEIDLWGNSLGNDGANGIGKAL 353

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGI 338
                      +   +K     RN ++ +G K +  A+   L ++  +++  N +   G 
Sbjct: 354 E----------TNQYIKSINLTRNSIQEQGIKFITNALSLSLCSIVTIDLSSNSLTLEGT 403

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             +S A   N+++ ++NL+ N I   G+  L ++L K  ++  LNL    +   G     
Sbjct: 404 KEISRALSFNRSIENINLSSNKIDSNGSKILCKSLLKNNTIKSLNLSMNDIGEQGCIYFY 463

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLV 426
           + L  +  LE +NL+ N+I  +G ++L+
Sbjct: 464 RVLKKSKNLEHLNLSLNKIGNKGLINLL 491


>gi|399498014|emb|CCG20335.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             KALH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKALHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIATKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L  L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKAL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L  L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKALHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|406942580|gb|EKD74779.1| NLR family, CARD protein [uncultured bacterium]
          Length = 318

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 85/156 (54%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NR+ + GAK LA   K  +TL  + +  N +   G   L++AFE N  L  +NL  N I+
Sbjct: 53  NRISDAGAKDLAEALKVNRTLRTLILLDNIVSDAGAKDLAEAFEVNSTLITINLLGNRIS 112

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  L  AL K  ++  L L +  +   GA  +A+ L  N++L  ++L  NEIS  G 
Sbjct: 113 DGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKVNSSLTTLDLENNEISDVGV 172

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +L +A+K    LK++N+S  +  + GV+E+ + +K
Sbjct: 173 KELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALK 208



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 79/155 (50%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           RL +   K LAA      T+E + +  N I   G   L++A + N+ LR L L DN ++ 
Sbjct: 26  RLNDADLKDLAAALNGNSTIETLNLTGNRISDAGAKDLAEALKVNRTLRTLILLDNIVSD 85

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
            GA  L +A     +L  +NL    +   GA  +A  L  N T+E + L  N+IS  G  
Sbjct: 86  AGAKDLAEAFEVNSTLITINLLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAK 145

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           DL +A+K  + L  +++  N+  + GV+E+ + +K
Sbjct: 146 DLAEALKVNSSLTTLDLENNEISDVGVKELAEALK 180



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L+L+ N     G + LA+ L+ +    L  L L +N +   G K L++A          E
Sbjct: 48  LNLTGNRISDAGAKDLAEALKVNRT--LRTLILLDNIVSDAGAKDLAEAF---------E 96

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            +   + + + G NR+ + GAK LAA  KK +T+E + + +N I  +G   L++A + N 
Sbjct: 97  VNSTLITINLLG-NRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKVNS 155

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
           +L  L+L +N I+  G   L +AL    +L  LNL    +  AG   +A+ L  N++L  
Sbjct: 156 SLTTLDLENNEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTT 215

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           + L  N I   G   L +A++    LK +N++  +  +  V+
Sbjct: 216 LELNLNVIGNVGVQALAQALRVNRMLKVLNLAYAEIDDVDVQ 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 75/146 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA      T+E + +  N I   G   L++A + N+ LR L L DN ++  GA  L +A
Sbjct: 35  LAAALNGNSTIETLNLTGNRISDAGAKDLAEALKVNRTLRTLILLDNIVSDAGAKDLAEA 94

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
                +L  +NL    +   GA  +A  L  N T+E + L  N+IS  G  DL +A+K  
Sbjct: 95  FEVNSTLITINLLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKVN 154

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + L  +++  N+  + GV+E+ + +K
Sbjct: 155 SSLTTLDLENNEISDVGVKELAEALK 180



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 78/146 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL  + +  N +   G   L++AFE N  L  +NL  N I+  GA  L  A
Sbjct: 63  LAEALKVNRTLRTLILLDNIVSDAGAKDLAEAFEVNSTLITINLLGNRISDGGAKDLAAA 122

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L K  ++  L L +  +   GA  +A+ L  N++L  ++L  NEIS  G  +L +A+K  
Sbjct: 123 LKKNRTIETLVLKENKISDLGAKDLAEALKVNSSLTTLDLENNEISDVGVKELAEALKVN 182

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK++N+S  +  + GV+E+ + +K
Sbjct: 183 RTLKKLNLSSIRVSDAGVKELAEALK 208



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 3/200 (1%)

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           L +TG ++      D  E+ K   +   L+  I   N + + GAK LA  F+   TL  +
Sbjct: 48  LNLTGNRISDAGAKDLAEALKVNRT---LRTLILLDNIVSDAGAKDLAEAFEVNSTLITI 104

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
            +  N I   G   L+ A ++N+ +  L L +N I+  GA  L +AL    SL  L+L +
Sbjct: 105 NLLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKVNSSLTTLDLEN 164

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
             +   G   +A+ L  N TL+ +NL+   +S  G  +L +A+K  + L  + ++ N  G
Sbjct: 165 NEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIG 224

Query: 447 EEGVEEMEKLMKSFGMAAAL 466
             GV+ + + ++   M   L
Sbjct: 225 NVGVQALAQALRVNRMLKVL 244



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L+ A   N  +  LNL  N I+  GA  L +AL    +L  L L D ++  AGA  +A+ 
Sbjct: 35  LAAALNGNSTIETLNLTGNRISDAGAKDLAEALKVNRTLRTLILLDNIVSDAGAKDLAEA 94

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
              N+TL  +NL  N IS  G  DL  A+K    ++ + + EN+  + G +++ + +K  
Sbjct: 95  FEVNSTLITINLLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKVN 154

Query: 150 GMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQ 209
                L LE++E      ++  E+ + N +  + + S++  +D+     A          
Sbjct: 155 SSLTTLDLENNEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAE--------- 205

Query: 210 SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
                     +LK  + L  L+L+ N  G +GV+ LA  LR
Sbjct: 206 ----------ALKVNSSLTTLELNLNVIGNVGVQALAQALR 236



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 67/132 (50%)

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A   N  +  LNL  N I+  GA  L +AL    +L  L L D ++  AGA  +A+ 
Sbjct: 35  LAAALNGNSTIETLNLTGNRISDAGAKDLAEALKVNRTLRTLILLDNIVSDAGAKDLAEA 94

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
              N+TL  +NL  N IS  G  DL  A+K    ++ + + EN+  + G +++ + +K  
Sbjct: 95  FEVNSTLITINLLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEALKVN 154

Query: 461 GMAAALVLEDDE 472
                L LE++E
Sbjct: 155 SSLTTLDLENNE 166



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L L DN     G + LA+    +    L  + L  N +   G K L+ AL
Sbjct: 66  ALKVNRTLRTLILLDNIVSDAGAKDLAEAFEVNST--LITINLLGNRISDGGAKDLAAAL 123

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  KK  +   ++  +   N++ + GAK LA   K   +L  +++  N I  VG+ 
Sbjct: 124 -------KKNRT---IETLVLKENKISDLGAKDLAEALKVNSSLTTLDLENNEISDVGVK 173

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            L++A + N+ L+ LNL+   ++  G   L +AL    SL  L L   ++ + G  ++A+
Sbjct: 174 ELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVNSSLTTLELNLNVIGNVGVQALAQ 233

Query: 400 YLTDNTTLEDVNLTCNEI---SVQGGLDLVKAMKNKTKLKQINVS 441
            L  N  L+ +NL   EI    VQ  +D   A++    + +INVS
Sbjct: 234 ALRVNRMLKVLNLAYAEIDDVDVQAFID---ALEENHIVTEINVS 275



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 86/176 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA  F+   TL  + +  N I   G   L+ A ++N+ +  L L +N I+  GA  L +A
Sbjct: 91  LAEAFEVNSTLITINLLGNRISDGGAKDLAAALKKNRTIETLVLKENKISDLGAKDLAEA 150

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL  L+L +  +   G   +A+ L  N TL+ +NL+   +S  G  +L +A+K  
Sbjct: 151 LKVNSSLTTLDLENNEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAEALKVN 210

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           + L  + ++ N  G  GV+ + + ++   M   L L   E +  D +   ++ EEN
Sbjct: 211 SSLTTLELNLNVIGNVGVQALAQALRVNRMLKVLNLAYAEIDDVDVQAFIDALEEN 266



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 6/132 (4%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K   +L  +++  N I  VG+  L++A + N+ L+ LNL+   ++  G   L +A
Sbjct: 147 LAEALKVNSSLTTLDLENNEISDVGVKELAEALKVNRTLKKLNLSSIRVSDAGVKELAEA 206

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI---SVQGGLDLVKAM 118
           L    SL  L L   ++ + G  ++A+ L  N  L+ +NL   EI    VQ  +D   A+
Sbjct: 207 LKVNSSLTTLELNLNVIGNVGVQALAQALRVNRMLKVLNLAYAEIDDVDVQAFID---AL 263

Query: 119 KNKTKLKQINVS 130
           +    + +INVS
Sbjct: 264 EENHIVTEINVS 275


>gi|326929333|ref|XP_003210821.1| PREDICTED: protein NLRC3-like [Meleagris gallopavo]
          Length = 1102

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 197/448 (43%), Gaps = 65/448 (14%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            ++ + + +N I + G  AL+ +   N+ L  L+L  N+I   GA  L  AL K   L  L
Sbjct: 711  IQRLSLAENQICNKGAKALARSLMVNRSLTALDLRSNSIGPSGAKALADALKKNQVLLSL 770

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            NL   ++K  GA+++A+ L  N  L  ++L  N I   G   L +A+     LK++ +S 
Sbjct: 771  NLQHNVIKEEGATALAEALLTNHRLITLHLQKNSIGAHGAKKLAEALAQNCSLKELMLSS 830

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N               S  +A AL +                                 N
Sbjct: 831  N---------------SXALAEALKV---------------------------------N 842

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
             S  S +  + S +N+  S  T+     +L +   L++L+L +N+    G   +A  LR+
Sbjct: 843  HSLQSLDLQSNSISNTGVSALTA-----ALCSNKGLIDLNLRENSISKEGGPAIAHALRT 897

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            +C   L++L L  N L   G K ++ A+        KE    AL       N ++ + A 
Sbjct: 898  NC--TLKKLDLAANLLHDEGGKAIALAM--------KENQ--ALTSLHLQWNFIQTQAAV 945

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             LA   +   +L  +++ +N I   G+ AL+ A + N  L  L+L   +I+  GA  L +
Sbjct: 946  ALAQALQSNGSLASLDLQENAIGDEGMAALAAALKVNTTLADLHLQVASISAAGAQALAE 1005

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            AL    SL +L+L    +  AGA ++A  L  N +L  +NL  N + + G + +  A++ 
Sbjct: 1006 ALMVNNSLQVLDLRGNSISVAGAKAMANALKVNRSLRWLNLQENSLGMDGAICIATALRG 1065

Query: 432  KTKLKQINVSENQFGEEGVEEMEKLMKS 459
               L  +N+  N+ G+ G + +   +++
Sbjct: 1066 NHGLTYVNLQGNRIGQSGAKMISDAIRT 1093



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K   +L+ +++  N I + G++AL+ A   NK L  LNL +N+I+ +G   +  A
Sbjct: 835 LAEALKVNHSLQSLDLQSNSISNTGVSALTAALCSNKGLIDLNLRENSISKEGGPAIAHA 894

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   G  +IA  + +N  L  ++L  N I  Q  + L +A+++ 
Sbjct: 895 LRTNCTLKKLDLAANLLHDEGGKAIALAMKENQALTSLHLQWNFIQTQAAVALAQALQSN 954

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L  +++ EN  G+EG+  +   +K
Sbjct: 955 GSLASLDLQENAIGDEGMAALAAALK 980



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 39/373 (10%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   KK + L  + +  N I   G TAL++A   N +L  L+L  N+I   GA  L +A
Sbjct: 757  LADALKKNQVLLSLNLQHNVIKEEGATALAEALLTNHRLITLHLQKNSIGAHGAKKLAEA 816

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L++  SL  L L      S+ + ++A+ L  N +L+ ++L  N IS  G   L  A+ + 
Sbjct: 817  LAQNCSLKELML------SSNSXALAEALKVNHSLQSLDLQSNSISNTGVSALTAALCSN 870

Query: 122  TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
              L  +N+ EN   +EG           G A A  L  +   C+ ++ D  +   +D   
Sbjct: 871  KGLIDLNLRENSISKEG-----------GPAIAHALRTN---CTLKKLDLAANLLHDEGG 916

Query: 182  EGDNSNLSHNDSNHS-HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
            +     +  N +  S H   N     +  +   + QS+ SL +      LDL +NA G  
Sbjct: 917  KAIALAMKENQALTSLHLQWNFIQTQAAVALAQALQSNGSLAS------LDLQENAIGDE 970

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            G+  LA  L+ +   A   L++ +           +  +++            +L+V   
Sbjct: 971  GMAALAAALKVNTTLADLHLQVASISAAGAQALAEALMVNN------------SLQVLDL 1018

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
              N +   GAK +A   K  ++L  + + +N +   G   ++ A   N  L ++NL  N 
Sbjct: 1019 RGNSISVAGAKAMANALKVNRSLRWLNLQENSLGMDGAICIATALRGNHGLTYVNLQGNR 1078

Query: 361  ITYKGAIPLGQAL 373
            I   GA  +  A+
Sbjct: 1079 IGQSGAKMISDAI 1091


>gi|326435597|gb|EGD81167.1| hypothetical protein PTSG_11207 [Salpingoeca sp. ATCC 50818]
          Length = 1485

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 14/186 (7%)

Query: 260 LKLNNNGLGITGCKLLSKALHD--CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
           + L   GLG  G + +++AL D  C E+       L L V     N + +EGA  LA + 
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLET-------LDLAV-----NSIGDEGAVALAEML 88

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
           K   TL+ + +  N I   G  AL++  + N  +  L L  N+I  +GA+ L + L    
Sbjct: 89  KHNTTLKILNLNNNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNT 148

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
           ++ +L L +  +   GA ++A+ L  NTTL  ++L  N I+  GG  L  A+     L++
Sbjct: 149 TMTLLALSENSIGPEGAVALAEMLKHNTTLTALDLDNNSITPVGGAALGAALDQNRTLEE 208

Query: 438 INVSEN 443
           + + +N
Sbjct: 209 LCIEKN 214



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 80/146 (54%)

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           +++   G+  +G  A+++A ++N  L  L+L  N+I  +GA+ L + L    +L ILNL 
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLN 100

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           +  +   GA ++A+ L  N T+  + L  N I  +G + L + +++ T +  + +SEN  
Sbjct: 101 NNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSI 160

Query: 446 GEEGVEEMEKLMKSFGMAAALVLEDD 471
           G EG   + +++K      AL L+++
Sbjct: 161 GPEGAVALAEMLKHNTTLTALDLDNN 186



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 80/146 (54%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +++   G+  +G  A+++A ++N  L  L+L  N+I  +GA+ L + L    +L ILNL 
Sbjct: 41  IDLGGYGLGDIGARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLN 100

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           +  +   GA ++A+ L  N T+  + L  N I  +G + L + +++ T +  + +SEN  
Sbjct: 101 NNSIGDEGAVALAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSI 160

Query: 135 GEEGVEEMEKLMKSFGMAAALVLEDD 160
           G EG   + +++K      AL L+++
Sbjct: 161 GPEGAVALAEMLKHNTTLTALDLDNN 186



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 73/141 (51%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA+ +A   K    LE +++  N I   G  AL++  + N  L+ LNLN+N+I  +GA+ 
Sbjct: 52  GARAVAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNNNSIGDEGAVA 111

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           L + L    ++  L L    +   GA ++A+ L  NTT+  + L+ N I  +G + L + 
Sbjct: 112 LAEMLKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIGPEGAVALAEM 171

Query: 429 MKNKTKLKQINVSENQFGEEG 449
           +K+ T L  +++  N     G
Sbjct: 172 LKHNTTLTALDLDNNSITPVG 192



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 70/137 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K    LE +++  N I   G  AL++  + N  L+ LNLN+N+I  +GA+ L + 
Sbjct: 56  VAEALKDNTCLETLDLAVNSIGDEGAVALAEMLKHNTTLKILNLNNNSIGDEGAVALAEM 115

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L L    +   GA ++A+ L  NTT+  + L+ N I  +G + L + +K+ 
Sbjct: 116 LKHNMTMTWLRLERNSIGDEGAVALAEMLEHNTTMTLLALSENSIGPEGAVALAEMLKHN 175

Query: 122 TKLKQINVSENQFGEEG 138
           T L  +++  N     G
Sbjct: 176 TTLTALDLDNNSITPVG 192


>gi|320170071|gb|EFW46970.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 668

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 12/235 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L  L+LSDN  G  G + +   LR+     L  L LN N +   G   +++ L 
Sbjct: 41  LKANGNLQYLELSDNQIGDAGAQAIGSALRNKS--TLIALSLNENKISDIGAFAVAEGLQ 98

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                ++       L +FI   N++ + GA+ + +  +    L  + +  N I  +G  A
Sbjct: 99  ASTALTE-------LGMFI---NQIGDAGAQAIGSALRNKANLSILHLSNNKIGDIGAFA 148

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++  + +  L  L +  N I   GA  +G AL    SL+ L L    +   GA ++A+ 
Sbjct: 149 IAEGLQASTALTQLGMFTNQIGDGGAQAIGSALRNKASLSSLYLDVNRISDIGACAVAEG 208

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           L  +T L  + +  N+I   G   +  A++NK  L ++N+S+NQ     V+ + K
Sbjct: 209 LQTSTALTQLGMHTNQIGDAGAQAIGAALRNKANLSKLNLSDNQISASAVQLISK 263



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 74/134 (55%)

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           +F+K K+  RV + ++ I H     +++  + N NL++L L+DN I   GA  +G AL  
Sbjct: 12  LFEKAKSSSRVILARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRN 71

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L  L+L +  +   GA ++A+ L  +T L ++ +  N+I   G   +  A++NK  L
Sbjct: 72  KSTLIALSLNENKISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKANL 131

Query: 436 KQINVSENQFGEEG 449
             +++S N+ G+ G
Sbjct: 132 SILHLSNNKIGDIG 145



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 72/134 (53%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+K K+   V + ++ I H     +++  + N  L++L L+DN I   GA  +G AL  
Sbjct: 12  LFEKAKSSSRVILARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRN 71

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
             +L  L+L +  +   GA ++A+ L  +T L ++ +  N+I   G   +  A++NK  L
Sbjct: 72  KSTLIALSLNENKISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKANL 131

Query: 125 KQINVSENQFGEEG 138
             +++S N+ G+ G
Sbjct: 132 SILHLSNNKIGDIG 145



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 81/171 (47%)

Query: 299 IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND 358
           I  R+ + ++ A ++A   K    L+ +E+  N I   G  A+  A      L  L+LN+
Sbjct: 23  ILARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNKSTLIALSLNE 82

Query: 359 NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           N I+  GA  + + L    +L  L +    +  AGA +I   L +   L  ++L+ N+I 
Sbjct: 83  NKISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKANLSILHLSNNKIG 142

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
             G   + + ++  T L Q+ +  NQ G+ G + +   +++    ++L L+
Sbjct: 143 DIGAFAIAEGLQASTALTQLGMFTNQIGDGGAQAIGSALRNKASLSSLYLD 193



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 12/199 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+  + L+ L L++N    IG   +A+ L++S   AL EL +  N +G  G + +  AL
Sbjct: 68  ALRNKSTLIALSLNENKISDIGAFAVAEGLQAST--ALTELGMFINQIGDAGAQAIGSAL 125

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +             L +     N++ + GA  +A   +    L ++ M  N I   G  
Sbjct: 126 RNKAN----------LSILHLSNNKIGDIGAFAIAEGLQASTALTQLGMFTNQIGDGGAQ 175

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+  A     +L  L L+ N I+  GA  + + L    +L  L +    +  AGA +I  
Sbjct: 176 AIGSALRNKASLSSLYLDVNRISDIGACAVAEGLQTSTALTQLGMHTNQIGDAGAQAIGA 235

Query: 400 YLTDNTTLEDVNLTCNEIS 418
            L +   L  +NL+ N+IS
Sbjct: 236 ALRNKANLSKLNLSDNQIS 254



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 23/249 (9%)

Query: 34  FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 93
           FE+ K    + L  + IT+  A+ + + L    +L  L L D  +  AGA +I   L + 
Sbjct: 13  FEKAKSSSRVILARSDITHDDALVIAEGLKANGNLQYLELSDNQIGDAGAQAIGSALRNK 72

Query: 94  TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAA 153
           +TL  ++L  N+IS  G   + + ++  T L ++ +  NQ G+ G + +   +++    +
Sbjct: 73  STLIALSLNENKISDIGAFAVAEGLQASTALTELGMFINQIGDAGAQAIGSALRNKANLS 132

Query: 154 ALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNT 213
            L L +++                     GD    +  +   +  A  Q    +NQ  + 
Sbjct: 133 ILHLSNNK--------------------IGDIGAFAIAEGLQASTALTQLGMFTNQIGDG 172

Query: 214 SNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
             Q+  S L+  A L  L L  N    IG   +A+ L++S   AL +L ++ N +G  G 
Sbjct: 173 GAQAIGSALRNKASLSSLYLDVNRISDIGACAVAEGLQTST--ALTQLGMHTNQIGDAGA 230

Query: 273 KLLSKALHD 281
           + +  AL +
Sbjct: 231 QAIGAALRN 239


>gi|354495357|ref|XP_003509797.1| PREDICTED: ribonuclease inhibitor-like [Cricetulus griseus]
 gi|344249425|gb|EGW05529.1| Ribonuclease inhibitor [Cricetulus griseus]
          Length = 456

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 190/452 (42%), Gaps = 64/452 (14%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFE-ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           TL  + +  N +   G+  +    +    K++ L+L + ++T  G   L   L  LP+L 
Sbjct: 52  TLTELSLCTNELGDPGVCLVLQGLQNPTCKIQKLSLQNCSLTEAGCRVLPDVLRSLPTLR 111

Query: 70  ILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
            L+L D  L  AG   + + L D    LE + L    ++      L    + K   K+I 
Sbjct: 112 ELHLSDNPLGDAGLKLLCEGLLDPQCRLEKLQLEYCNLTATSCEPLASVFRVKPNFKEIV 171

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           +S N   E GV+ + + +K                              DS  + ++  L
Sbjct: 172 LSNNDLHEAGVQMLCQGLK------------------------------DSACQLESLKL 201

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD- 247
                    N    S N  +     +++        A L +LDL  N  G  G+  L   
Sbjct: 202 --------ENCGITSANCKDLCDVVASK--------ASLQQLDLGSNKLGNAGIAALCSG 245

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
           LL  SC   +  L L    +   GCK L + L    + S KE S       +AG N L +
Sbjct: 246 LLLPSC--RIRTLWLWECDITAEGCKDLCRVLR--TKQSLKELS-------LAG-NELRD 293

Query: 308 EGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           EGA++L  ++ +    LE + +    +     + +     +N++L  L ++ N +   G 
Sbjct: 294 EGAQLLCESLLEPGCQLESLWIKTCSLTAACCSHICSVLTKNRSLLELQMSSNPLGDLGV 353

Query: 367 IPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 425
           + L +AL +  + L +L LGDC +   G SS+A  L  N +L +++L+ N +   G L L
Sbjct: 354 LELCKALGQPDTVLRVLWLGDCDVTDNGCSSLATVLLHNRSLRELDLSNNCMGDSGVLRL 413

Query: 426 VKAMKNKT-KLKQINVSENQFGEEGVEEMEKL 456
           V++++  +  L+Q+ + +  + EE  +++  L
Sbjct: 414 VESVRQPSCALQQLVLYDIYWTEEVEDQLRAL 445



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 70/141 (49%), Gaps = 2/141 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQ 60
           LA+VF+     + + +  N ++  G+  L    +++  +L  L L +  IT      L  
Sbjct: 157 LASVFRVKPNFKEIVLSNNDLHEAGVQMLCQGLKDSACQLESLKLENCGITSANCKDLCD 216

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
            ++   SL  L+LG   L +AG +++    L  +  +  + L   +I+ +G  DL + ++
Sbjct: 217 VVASKASLQQLDLGSNKLGNAGIAALCSGLLLPSCRIRTLWLWECDITAEGCKDLCRVLR 276

Query: 120 NKTKLKQINVSENQFGEEGVE 140
            K  LK+++++ N+  +EG +
Sbjct: 277 TKQSLKELSLAGNELRDEGAQ 297


>gi|320165382|gb|EFW42281.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 398

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 92/161 (57%), Gaps = 1/161 (0%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
            I  +N++++ GA+++A   +    L  + +PQN I   G  A+++A + N  L+ LNL 
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLR 78

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
           +N I   GA  + +AL    +LA+L+L    +  AGA +IA+ L +N TL+++ L  N+I
Sbjct: 79  ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQI 138

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLM 457
              G   + +A+K    L+++++  NQ G+ G + + E LM
Sbjct: 139 DDAGAHAIAEALKVNKTLEKLDLRGNQIGDIGAQAIAEALM 179



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 76/131 (58%), Gaps = 1/131 (0%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           +PQN I   G  A+++A + N  L+ LNL +N I   GA  + +AL    +LA+L+L   
Sbjct: 49  LPQNQIGDAGARAIAEALKVNTTLKELNLRENQIGAAGAQAIAEALKVNTTLAVLSLYQN 108

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
            +  AGA +IA+ L +N TL+++ L  N+I   G   + +A+K    L+++++  NQ G+
Sbjct: 109 QIGDAGAQAIAEALRENKTLKELYLYQNQIDDAGAHAIAEALKVNKTLEKLDLRGNQIGD 168

Query: 137 EGVEEM-EKLM 146
            G + + E LM
Sbjct: 169 IGAQAIAEALM 179



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 59/105 (56%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L L+ N I   GA  + +AL    +L  LNL    +  AGA +IA+ L  NTTL+++NL 
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLR 78

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N+I   G   + +A+K  T L  +++ +NQ G+ G + + + ++
Sbjct: 79  ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALR 123



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 59/105 (56%)

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           L L+ N I   GA  + +AL    +L  LNL    +  AGA +IA+ L  NTTL+++NL 
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLR 78

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            N+I   G   + +A+K  T L  +++ +NQ G+ G + + + ++
Sbjct: 79  ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALR 123



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 67/129 (51%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           QN I   G   +++A   N  L  LNL  N I   GA  + +AL    +L  LNL +  +
Sbjct: 23  QNQIDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLRENQI 82

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
            +AGA +IA+ L  NTTL  ++L  N+I   G   + +A++    LK++ + +NQ  + G
Sbjct: 83  GAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKELYLYQNQIDDAG 142

Query: 139 VEEMEKLMK 147
              + + +K
Sbjct: 143 AHAIAEALK 151



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 40/224 (17%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L L  N     G + +A+ LR +   AL  L L  N +G  G + +++AL     ++ KE
Sbjct: 19  LILHQNQIDDAGAQVIAEALRVNT--ALTGLNLPQNQIGDAGARAIAEALK--VNTTLKE 74

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
              L L+      N++   GA+ +A   K   TL  + + QN I   G  A+++A  ENK
Sbjct: 75  ---LNLR-----ENQIGAAGAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENK 126

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L+ L L  N I                              AGA +IA+ L  N TLE 
Sbjct: 127 TLKELYLYQNQI----------------------------DDAGAHAIAEALKVNKTLEK 158

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           ++L  N+I   G   + +A+    +L  +++  N  G+ G++ +
Sbjct: 159 LDLRGNQIGDIGAQAIAEALMVNKQLWWLDIRFNFIGKAGLQAI 202



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 25/203 (12%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           +  AGA  IA+ L  NT L  +NL  N+I   G   + +A+K  T LK++N+ ENQ G  
Sbjct: 26  IDDAGAQVIAEALRVNTALTGLNLPQNQIGDAGARAIAEALKVNTTLKELNLRENQIGAA 85

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN--DSNH 195
           G + + + +K     A L L  ++   +  +   E+  EN +  E     L  N  D   
Sbjct: 86  GAQAIAEALKVNTTLAVLSLYQNQIGDAGAQAIAEALRENKTLKE---LYLYQNQIDDAG 142

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           +H  +                   +LK    L +LDL  N  G IG + +A+ L  +   
Sbjct: 143 AHAIAE------------------ALKVNKTLEKLDLRGNQIGDIGAQAIAEALMVNK-- 182

Query: 256 ALEELKLNNNGLGITGCKLLSKA 278
            L  L +  N +G  G + + +A
Sbjct: 183 QLWWLDIRFNFIGKAGLQAIGEA 205


>gi|148746168|dbj|BAF63849.1| putative Ran GTPase activating protein [Hydroides elegans]
          Length = 165

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEG-SPLALKVFIAGRNRLENEGAKMLAAV 316
           E+L+L+N GLG+TG K+L+++L +   + +  G +P A  + +    RLE+EG+  L   
Sbjct: 1   EQLRLHNKGLGVTGGKMLARSLLEMLRTKRGGGVAPGAACLCVRSTVRLEDEGSTALDRG 60

Query: 317 F-KKLKTLERVEMPQNGIYHVG-ITALSDAFEENKNLRHLNLNDNTITYKGAI-PLGQAL 373
           F K + +LE V+MPQNGI   G +         N +LR++NLNDN ++ + A  P  + L
Sbjct: 61  FLKTMGSLEEVQMPQNGINKAGHMQHRPTPLTSNTDLRYINLNDNHVSPRRAPSPWPRHL 120

Query: 374 SKL 376
             L
Sbjct: 121 PAL 123


>gi|320163960|gb|EFW40859.1| NOD3 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 633

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 84/156 (53%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GA+ +A   K   T+  +++ QN I   G  A+S A + NK L  ++LN N + 
Sbjct: 97  NQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQAISVALKVNKTLIKIDLNGNQVG 156

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL    +LA L L +  L  AGA++IA+ L  NTTL+ + L  N+I   G 
Sbjct: 157 DAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGA 216

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A+K    L  + + +NQ G  G + + + +K
Sbjct: 217 QAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAEALK 252



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    + +L LS N  G  G + +A+ L+ +    +  L L  N +G  G + +S AL
Sbjct: 82  TLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTT--VTNLDLWQNQIGDAGAQAISVAL 139

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K    L +K+ + G N++ + GA+ +A   K   TL  + +  N +   G T
Sbjct: 140 --------KVNKTL-IKIDLNG-NQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGAT 189

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++  + N  L+ L L  N I   GA  + +AL    +L  L L    + +AGA +IA+
Sbjct: 190 AIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAE 249

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NT L    L  NEI   G   + +A+K  + L  + +  NQ G+ G + + +  K
Sbjct: 250 ALKVNTGLIVPCLRENEIGNAGAQAIAEALKVNSTLYGLFLGNNQIGDAGAQALAEAFK 308



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 78/146 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+ ++++ QN I   G  A+S A + NK L  ++LN N +   GA  + +A
Sbjct: 107 IAETLKVNTTVTNLDLWQNQIGDAGAQAISVALKVNKTLIKIDLNGNQVGDAGAQAIAEA 166

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +LA L L +  L  AGA++IA+ L  NTTL+ + L  N+I   G   + +A+K  
Sbjct: 167 LKVNTTLANLGLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEALKVN 226

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L  + + +NQ G  G + + + +K
Sbjct: 227 KTLTCLFLKQNQIGNAGAQAIAEALK 252



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 11/246 (4%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA------LEELKLNNN--GLGITGC 272
           LK  + +  L L  N  G  G   +A+ L+ +           E LK+N     LG++  
Sbjct: 38  LKGNSNITALSLGWNQIGDAGARAIAETLKRNMTVTEPARAIAETLKVNRTVTDLGLSAN 97

Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
           ++         E+ K   +   L ++   +N++ + GA+ ++   K  KTL ++++  N 
Sbjct: 98  QIGDAGAQAIAETLKVNTTVTNLDLW---QNQIGDAGAQAISVALKVNKTLIKIDLNGNQ 154

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
           +   G  A+++A + N  L +L L++N +   GA  + + L    +L  L L    +  A
Sbjct: 155 VGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEA 214

Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
           GA +IA+ L  N TL  + L  N+I   G   + +A+K  T L    + EN+ G  G + 
Sbjct: 215 GAQAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAEALKVNTGLIVPCLRENEIGNAGAQA 274

Query: 453 MEKLMK 458
           + + +K
Sbjct: 275 IAEALK 280



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 16/222 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    +  LDL  N  G  G + ++  L+ +    L ++ LN N +G  G + +++AL
Sbjct: 110 TLKVNTTVTNLDLWQNQIGDAGAQAISVALKVNKT--LIKIDLNGNQVGDAGAQAIAEAL 167

Query: 280 HDCYESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
                   K  + LA L +     N+L + GA  +A V K   TL+ + + +N I   G 
Sbjct: 168 --------KVNTTLANLGLH---NNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGA 216

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A+++A + NK L  L L  N I   GA  + +AL     L +  L +  + +AGA +IA
Sbjct: 217 QAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAEALKVNTGLIVPCLRENEIGNAGAQAIA 276

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
           + L  N+TL  + L  N+I   G   L +A   K   KQ+++
Sbjct: 277 EALKVNSTLYGLFLGNNQIGDAGAQALAEAF--KVNQKQVDI 316



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++LK    L+++DL+ N  G  G + +A+ L+ +   A   L L+NN LG  G   +++ 
Sbjct: 137 VALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLA--NLGLHNNKLGDAGATAIAEV 194

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L               LK     +N++   GA+ +A   K  KTL  + + QN I + G 
Sbjct: 195 LK----------VNTTLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGA 244

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A+++A + N  L    L +N I   GA  + +AL    +L  L LG+  +  AGA ++A
Sbjct: 245 QAIAEALKVNTGLIVPCLRENEIGNAGAQAIAEALKVNSTLYGLFLGNNQIGDAGAQALA 304

Query: 399 KYLTDNTTLEDVNLTCNEIS 418
           +    N    D+ L  N IS
Sbjct: 305 EAFKVNQKQVDIFLERNCIS 324



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 75/146 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  +T+  + +  N I   G  A+++  + N  + +L+L  N I   GA  +  A
Sbjct: 79  IAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQAISVA 138

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  ++L    +  AGA +IA+ L  NTTL ++ L  N++   G   + + +K  
Sbjct: 139 LKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIAEVLKVN 198

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T LK + +++NQ GE G + + + +K
Sbjct: 199 TTLKALGLAKNQIGEAGAQAIAEALK 224



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++   K  KTL  +++  N +   G  A+++A + N  L +L L++N +   GA  + + 
Sbjct: 135 ISVALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIAEV 194

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    +  AGA +IA+ L  N TL  + L  N+I   G   + +A+K  
Sbjct: 195 LKVNTTLKALGLAKNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAEALKVN 254

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L    + EN+ G  G + + + +K
Sbjct: 255 TGLIVPCLRENEIGNAGAQAIAEALK 280



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 70/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL ++ +  N +   G TA+++  + N  L+ L L  N I   GA  + +A
Sbjct: 163 IAEALKVNTTLANLGLHNNKLGDAGATAIAEVLKVNTTLKALGLAKNQIGEAGAQAIAEA 222

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    + +AGA +IA+ L  NT L    L  NEI   G   + +A+K  
Sbjct: 223 LKVNKTLTCLFLKQNQIGNAGAQAIAEALKVNTGLIVPCLRENEIGNAGAQAIAEALKVN 282

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + L  + +  NQ G+ G + + +  K
Sbjct: 283 STLYGLFLGNNQIGDAGAQALAEAFK 308



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 17/143 (11%)

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK-----LPSLAI------ 381
           I   G  A+++  + N N+  L+L  N I   GA  + + L +      P+ AI      
Sbjct: 26  IDDAGAQAIAEGLKGNSNITALSLGWNQIGDAGARAIAETLKRNMTVTEPARAIAETLKV 85

Query: 382 ------LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
                 L L    +  AGA +IA+ L  NTT+ +++L  N+I   G   +  A+K    L
Sbjct: 86  NRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQAISVALKVNKTL 145

Query: 436 KQINVSENQFGEEGVEEMEKLMK 458
            +I+++ NQ G+ G + + + +K
Sbjct: 146 IKIDLNGNQVGDAGAQAIAEALK 168



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 25/253 (9%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++  + N+ +  L L+ N I   GA  + + L    ++  L+L    +  AGA +I+ 
Sbjct: 78  AIAETLKVNRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQAISV 137

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L  N TL  ++L  N++   G   + +A+K  T L  + +  N+ G+ G   + +++K 
Sbjct: 138 ALKVNKTLIKIDLNGNQVGDAGAQAIAEALKVNTTLANLGLHNNKLGDAGATAIAEVLKV 197

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS--HNDSNHSHNASNQSHNN 206
                AL L         + Q  E+  +  ++A   N  L+      N   NA  Q+   
Sbjct: 198 NTTLKALGLA--------KNQIGEAGAQAIAEALKVNKTLTCLFLKQNQIGNAGAQAIAE 249

Query: 207 SNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNG 266
                        +LK    L+   L +N  G  G + +A+ L+ +    L  L L NN 
Sbjct: 250 -------------ALKVNTGLIVPCLRENEIGNAGAQAIAEALKVNST--LYGLFLGNNQ 294

Query: 267 LGITGCKLLSKAL 279
           +G  G + L++A 
Sbjct: 295 IGDAGAQALAEAF 307



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 17/143 (11%)

Query: 22  IYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK-----LPSLAI------ 70
           I   G  A+++  + N  +  L+L  N I   GA  + + L +      P+ AI      
Sbjct: 26  IDDAGAQAIAEGLKGNSNITALSLGWNQIGDAGARAIAETLKRNMTVTEPARAIAETLKV 85

Query: 71  ------LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
                 L L    +  AGA +IA+ L  NTT+ +++L  N+I   G   +  A+K    L
Sbjct: 86  NRTVTDLGLSANQIGDAGAQAIAETLKVNTTVTNLDLWQNQIGDAGAQAISVALKVNKTL 145

Query: 125 KQINVSENQFGEEGVEEMEKLMK 147
            +I+++ NQ G+ G + + + +K
Sbjct: 146 IKIDLNGNQVGDAGAQAIAEALK 168


>gi|406943494|gb|EKD75477.1| hypothetical protein ACD_44C00117G0002 [uncultured bacterium]
          Length = 1248

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 25/261 (9%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLN--NNGLGITGCKLLSK 277
           +LK    +  LDL  N+ G  G E LA++L ++       LK N  NNG    G + L++
Sbjct: 729 ALKVNQSVKVLDLDHNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNG----GVQALAE 784

Query: 278 ALH-----------DCYESSKKEGSPLA--------LKVFIAGRNRLENEGAKMLAAVFK 318
           AL            + Y    K  S  A        L+     ++ L   GA +L     
Sbjct: 785 ALKVNKTLQELNLGNNYVMDTKTSSLFAEALKQNNTLQKLNLNKSGLHELGAHILTEALS 844

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
              TL  + + +NG+  +G   ++   + N  L+ L+L+DN I+   AI + + L    +
Sbjct: 845 TNHTLTELSLRRNGLGDIGGLIIAKVLQVNSTLKKLDLSDNIISDVSAISIARTLITNHT 904

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L  LNL +  L +A A+SIA  L  N TL+ ++L    I++   + +  A+K    L+++
Sbjct: 905 LQELNLANNFLNTATATSIADALKTNQTLQKLDLENTRINLGDVIIIADALKINHTLQEL 964

Query: 439 NVSENQFGEEGVEEMEKLMKS 459
           N++ N+ G   +  + + +K+
Sbjct: 965 NLANNKIGSFSIRAIAETLKT 985



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 75/138 (54%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + + +NG+  +G   ++   + N  L+ L+L+DN I+   AI + + L    +L  
Sbjct: 848 TLTELSLRRNGLGDIGGLIIAKVLQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQE 907

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL +  L +A A+SIA  L  N TL+ ++L    I++   + +  A+K    L+++N++
Sbjct: 908 LNLANNFLNTATATSIADALKTNQTLQKLDLENTRINLGDVIIIADALKINHTLQELNLA 967

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N+ G   +  + + +K+
Sbjct: 968 NNKIGSFSIRAIAETLKT 985



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 14/241 (5%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGL-ADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            +LK    L EL+L +N         L A+ L+ +    L++L LN +GL   G  +L++A
Sbjct: 785  ALKVNKTLQELNLGNNYVMDTKTSSLFAEALKQNNT--LQKLNLNKSGLHELGAHILTEA 842

Query: 279  LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
            L     S+    + L+L+     RN L + G  ++A V +   TL+++++  N I  V  
Sbjct: 843  L-----STNHTLTELSLR-----RNGLGDIGGLIIAKVLQVNSTLKKLDLSDNIISDVSA 892

Query: 339  TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             +++     N  L+ LNL +N +    A  +  AL    +L  L+L +  +       IA
Sbjct: 893  ISIARTLITNHTLQELNLANNFLNTATATSIADALKTNQTLQKLDLENTRINLGDVIIIA 952

Query: 399  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG-VEEMEKLM 457
              L  N TL+++NL  N+I       + + +K    L+++N+   Q  ++  +  +E L+
Sbjct: 953  DALKINHTLQELNLANNKIGSFSIRAIAETLKTNYTLQKLNLESTQLTDKTLLSPIEDLL 1012

Query: 458  K 458
            K
Sbjct: 1013 K 1013



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 147/350 (42%), Gaps = 30/350 (8%)

Query: 69   AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             IL+L +  +  A A ++++ L  N T   V L  N+I  QG   L  A+K    +K ++
Sbjct: 681  VILDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKALAGALKVNQSVKVLD 740

Query: 129  VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
            +  N  G+ G E + +++ +      L L+ +       +   E+ + N +  E    NL
Sbjct: 741  LDHNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEALKVNKTLQE---LNL 797

Query: 189  SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
                            NN      TS+    +LK    L +L+L+ +    +G   L + 
Sbjct: 798  G---------------NNYVMDTKTSSLFAEALKQNNTLQKLNLNKSGLHELGAHILTEA 842

Query: 249  LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
            L  S    L EL L  NGLG  G  +++K L               LK      N + + 
Sbjct: 843  L--STNHTLTELSLRRNGLGDIGGLIIAKVLQVNS----------TLKKLDLSDNIISDV 890

Query: 309  GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
             A  +A       TL+ + +  N +     T+++DA + N+ L+ L+L +  I     I 
Sbjct: 891  SAISIARTLITNHTLQELNLANNFLNTATATSIADALKTNQTLQKLDLENTRINLGDVII 950

Query: 369  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
            +  AL    +L  LNL +  + S    +IA+ L  N TL+ +NL   +++
Sbjct: 951  IADALKINHTLQELNLANNKIGSFSIRAIAETLKTNYTLQKLNLESTQLT 1000



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 28/185 (15%)

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
            +  F    N + +E A+ +A   K  +T+  + +  N I   GI A+++A +EN+ ++ 
Sbjct: 184 TITTFYLDSNSISDEDARTIAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKT 243

Query: 354 LNLNDNTI------TYKGAIPLGQALSKLP----------------------SLAILNLG 385
           ++ ++N+I      T+  A+ + Q+++ L                       S+  L L 
Sbjct: 244 VHFDNNSISDAGMQTFTEALKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLS 303

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
              L +AG  +IA+ L +N ++  + L    IS      + +A+     LK +++S+N  
Sbjct: 304 YTSLGNAGMQAIAEILRNNDSITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNSI 363

Query: 446 GEEGV 450
           GE  +
Sbjct: 364 GETAL 368



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 67/129 (51%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           + A   K+  TL+ + + ++G++ +G   L++A   N  L  L+L  N +   G + + +
Sbjct: 810 LFAEALKQNNTLQKLNLNKSGLHELGAHILTEALSTNHTLTELSLRRNGLGDIGGLIIAK 869

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L    +L  L+L D ++    A SIA+ L  N TL+++NL  N ++      +  A+K 
Sbjct: 870 VLQVNSTLKKLDLSDNIISDVSAISIARTLITNHTLQELNLANNFLNTATATSIADALKT 929

Query: 121 KTKLKQINV 129
              L+++++
Sbjct: 930 NQTLQKLDL 938



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 88/169 (52%), Gaps = 5/169 (2%)

Query: 283 YESSKKEGSPLALKVFIAGRNR-LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
           + SS +E +P   +V +  R + +++  A  L+   K   T   V + +N I   G  AL
Sbjct: 670 HTSSIEENNP---EVILDLREKNIDDAKAIALSETLKTNHTAMAVLLEKNKIGPQGAKAL 726

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           + A + N++++ L+L+ N+I   GA  L + L+   S+  L L   L+ + G  ++A+ L
Sbjct: 727 AGALKVNQSVKVLDLDHNSIGDAGAEALAEVLTTNDSITTLYLKHNLINNGGVQALAEAL 786

Query: 402 TDNTTLEDVNLTCNEI-SVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             N TL+++NL  N +   +      +A+K    L+++N++++   E G
Sbjct: 787 KVNKTLQELNLGNNYVMDTKTSSLFAEALKQNNTLQKLNLNKSGLHELG 835



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 28/166 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTI------TYKGA 55
           +A   K  +T+  + +  N I   GI A+++A +EN+ ++ ++ ++N+I      T+  A
Sbjct: 203 IAEAIKTNQTITTLYIKGNSISDTGIQAIAEALKENRTIKTVHFDNNSISDAGMQTFTEA 262

Query: 56  IPLGQALSKLP----------------------SLAILNLGDCLLKSAGASSIAKYLTDN 93
           + + Q+++ L                       S+  L L    L +AG  +IA+ L +N
Sbjct: 263 LKMNQSITTLHLEHSSRSDMDIQAIAETLKVNHSIKTLRLSYTSLGNAGMQAIAEILRNN 322

Query: 94  TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            ++  + L    IS      + +A+     LK +++S+N  GE  +
Sbjct: 323 DSITTLYLELKSISDTDAKTIAEALSINKTLKTLDLSKNSIGETAL 368



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 28/291 (9%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V + +N I   G  AL+ A + N+ ++ L+L+ N+I   GA  L + L+   S+  L L 
Sbjct: 711 VLLEKNKIGPQGAKALAGALKVNQSVKVLDLDHNSIGDAGAEALAEVLTTNDSITTLYLK 770

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI-SVQGGLDLVKAMKNKTKLKQINVSENQ 133
             L+ + G  ++A+ L  N TL+++NL  N +   +      +A+K    L+++N++++ 
Sbjct: 771 HNLINNGGVQALAEALKVNKTLQELNLGNNYVMDTKTSSLFAEALKQNNTLQKLNLNKSG 830

Query: 134 FGEEGVEEMEKLMKS-----------------FGMAAALVLEDDEGECSDEEQDEESEEE 176
             E G   + + + +                  G+  A VL+ +    + ++ D      
Sbjct: 831 LHELGAHILTEALSTNHTLTELSLRRNGLGDIGGLIIAKVLQVN---STLKKLDLSDNII 887

Query: 177 NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
           +D  A      L    +NH+    N ++N  N +  TS     +LKT   L +LDL +  
Sbjct: 888 SDVSAISIARTLI---TNHTLQELNLANNFLNTATATSIAD--ALKTNQTLQKLDLENTR 942

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSK 287
                V  +AD L+      L+EL L NN +G    + +++ L   Y   K
Sbjct: 943 INLGDVIIIADALK--INHTLQELNLANNKIGSFSIRAIAETLKTNYTLQK 991


>gi|156383354|ref|XP_001632799.1| predicted protein [Nematostella vectensis]
 gi|156219860|gb|EDO40736.1| predicted protein [Nematostella vectensis]
          Length = 249

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 18/211 (8%)

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKE---------GSPLALKVFIAGR------ 302
           EE+K+N+  L   G K ++  L     +SK +         GS    KV ++ +      
Sbjct: 23  EEVKINHRYLRALGTKAVASILRSTDSTSKVQMSFNDLSAKGSVYMGKVLVSNKSLKELD 82

Query: 303 ---NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N +  EG   ++    +   + R+++  NG+       L+DA   N  LR+LNL+ N
Sbjct: 83  LANNNIRKEGVSAISNALVENTVIRRLDLSGNGLTDKDAKILADAIGNNSTLRYLNLSYN 142

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
               K    +G ALS    +  LNL    ++  GA  I + L  N TLE ++L+ N    
Sbjct: 143 KFGEKAGEVIGAALSYNNGITELNLSWNQIRRRGAQGIHRSLRVNDTLEMLDLSWNGFDD 202

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            G  DL++A+K  T L  +N+S N+  + G+
Sbjct: 203 FGTEDLMEALKRNTSLIVLNLSNNRLTDRGI 233



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 74/138 (53%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K+L+ +++  N I   G++A+S+A  EN  +R L+L+ N +T K A  L  A+    +L 
Sbjct: 76  KSLKELDLANNNIRKEGVSAISNALVENTVIRRLDLSGNGLTDKDAKILADAIGNNSTLR 135

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            LNL            I   L+ N  + ++NL+ N+I  +G   + ++++    L+ +++
Sbjct: 136 YLNLSYNKFGEKAGEVIGAALSYNNGITELNLSWNQIRRRGAQGIHRSLRVNDTLEMLDL 195

Query: 130 SENQFGEEGVEEMEKLMK 147
           S N F + G E++ + +K
Sbjct: 196 SWNGFDDFGTEDLMEALK 213



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            +  +++  NG+       L+DA   N  LR+LNL+ N    K    +G ALS    +  
Sbjct: 105 VIRRLDLSGNGLTDKDAKILADAIGNNSTLRYLNLSYNKFGEKAGEVIGAALSYNNGITE 164

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    ++  GA  I + L  N TLE ++L+ N     G  DL++A+K  T L  +N+S
Sbjct: 165 LNLSWNQIRRRGAQGIHRSLRVNDTLEMLDLSWNGFDDFGTEDLMEALKRNTSLIVLNLS 224

Query: 131 ENQFGEEGV 139
            N+  + G+
Sbjct: 225 NNRLTDRGI 233



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 51/256 (19%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E V++    +  +G  A++           + ++ N ++ KG++ +G+ L    SL  L+
Sbjct: 23  EEVKINHRYLRALGTKAVASILRSTDSTSKVQMSFNDLSAKGSVYMGKVLVSNKSLKELD 82

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L +  ++  G S+I+  L +NT +  ++L+ N ++ +    L  A+ N + L+ +N+S N
Sbjct: 83  LANNNIRKEGVSAISNALVENTVIRRLDLSGNGLTDKDAKILADAIGNNSTLRYLNLSYN 142

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
           +FGE+  E +       G A                                   LS+N+
Sbjct: 143 KFGEKAGEVI-------GAA-----------------------------------LSYNN 160

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
                N S       NQ      Q  H SL+    L  LDLS N F   G E L + L+ 
Sbjct: 161 GITELNLS------WNQIRRRGAQGIHRSLRVNDTLEMLDLSWNGFDDFGTEDLMEALKR 214

Query: 252 SCCFALEELKLNNNGL 267
           +    +  L L+NN L
Sbjct: 215 NTSLIV--LNLSNNRL 228



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 68/146 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A++ +   +   V+M  N +   G   +      NK L+ L+L +N I  +G   +  A
Sbjct: 40  VASILRSTDSTSKVQMSFNDLSAKGSVYMGKVLVSNKSLKELDLANNNIRKEGVSAISNA 99

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +   +  L+L    L    A  +A  + +N+TL  +NL+ N+   + G  +  A+   
Sbjct: 100 LVENTVIRRLDLSGNGLTDKDAKILADAIGNNSTLRYLNLSYNKFGEKAGEVIGAALSYN 159

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             + ++N+S NQ    G + + + ++
Sbjct: 160 NGITELNLSWNQIRRRGAQGIHRSLR 185


>gi|399497886|emb|CCG20271.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G++L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSKLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+++EG   L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVDSEGGSALCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 36  ENKKLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 67
           E  KL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSKLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEALGMCSHLKKL 331

Query: 128 NVSENQFGEE 137
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 29/136 (21%)

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL 376
            S+A E +K L+ LNL+DN +  KG    G+                        A+S+L
Sbjct: 207 FSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSEL 265

Query: 377 -PS---LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
            PS   L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   
Sbjct: 266 VPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSALCEALGMC 325

Query: 433 TKLKQINVSENQFGEE 448
           + LK++++ +N FG E
Sbjct: 326 SHLKKLDLRDNMFGPE 341



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S++ + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVDSEGGSALCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|71409601|ref|XP_807137.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70871071|gb|EAN85286.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 456

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 18/224 (8%)

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           ++C   L  + L+ N +G  G K L +++         + +PL +   +A  N++ + G 
Sbjct: 177 AACHRDLTSVDLSWNNVGPLGTKCLLRSM---------QRNPLCVYHLMA--NKIGDAGT 225

Query: 311 KMLAAVFKKL--KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
             L    ++   K    + + +N + H G  A+    E N+ +  ++L+ NT+  KG   
Sbjct: 226 TCLCEAMQRFAGKGTTTLNLFRNDVRHKGCEAVGRLLENNEFILEVSLHSNTLGLKGMQL 285

Query: 369 LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLV 426
           L Q  +  P+ +  LNLG+C+L   GA   A  +T N   LE +NL  N  S  GG+ +V
Sbjct: 286 LRQHFTAAPNRVRSLNLGNCMLGDEGAPEAAALITANLPALERLNLASNGFSDDGGVIIV 345

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           KA+   T L  ++ ++N FG + V+   +L+   G A  L L D
Sbjct: 346 KALLKNTFLVMVSCADNTFGTKTVDATAELI---GTAKVLKLLD 386



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 5/143 (3%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCL 77
           +N + H G  A+    E N+ +  ++L+ NT+  KG   L Q  +  P+ +  LNLG+C+
Sbjct: 247 RNDVRHKGCEAVGRLLENNEFILEVSLHSNTLGLKGMQLLRQHFTAAPNRVRSLNLGNCM 306

Query: 78  LKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
           L   GA   A  +T N   LE +NL  N  S  GG+ +VKA+   T L  ++ ++N FG 
Sbjct: 307 LGDEGAPEAAALITANLPALERLNLASNGFSDDGGVIIVKALLKNTFLVMVSCADNTFGT 366

Query: 137 EGVEEMEKLMKSFGMAAALVLED 159
           + V+   +L+   G A  L L D
Sbjct: 367 KTVDATAELI---GTAKVLKLLD 386



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 28/165 (16%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR----HLNLN 357
           +N + +EGA  +A V +K +T++ + + QNGI  VG  AL+ AF  N N        N N
Sbjct: 95  QNNIGDEGAVTMAEVLRKNETIQYLNLAQNGITDVGGIALASAFIPNVNPNGQPGQWNRN 154

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLG-DCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             TI   G                 +LG D LL  + A++  + LT       V+L+ N 
Sbjct: 155 LFTIILAGN----------------DLGDDTLLAMSKAAACHRDLT------SVDLSWNN 192

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           +   G   L+++M+ +  L   ++  N+ G+ G   + + M+ F 
Sbjct: 193 VGPLGTKCLLRSMQ-RNPLCVYHLMANKIGDAGTTCLCEAMQRFA 236


>gi|348670137|gb|EGZ09959.1| hypothetical protein PHYSODRAFT_355832 [Phytophthora sojae]
          Length = 265

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 90/178 (50%)

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
           K + +   ++K +   L LK   A + +L   G  ++  VF+  +T+ R+ +P + I  V
Sbjct: 37  KEILEKIRANKDQIRELDLKDMAAKKRKLRPAGGDLVGRVFQLNRTVLRLLLPDHDIEDV 96

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G  A+ +    N  L+HL+L  N IT +GA  +  AL    SL  L L    L  AGA +
Sbjct: 97  GAKAMGNMLRANNTLQHLDLRGNEITAEGAAAISDALYGHESLEHLGLSSNKLGDAGAKA 156

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
           IA+ L  N +L+ + L  N I  +GG  L++A+     L  + + +N   +E ++++ 
Sbjct: 157 IAQVLPYNISLKYLGLANNGIGEEGGKALLEAILQNRSLVMVQLVKNDIPKEILDKIR 214



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 74/143 (51%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++  VF+  +T+  + +P + I  VG  A+ +    N  L+HL+L  N IT +GA  +  
Sbjct: 72  LVGRVFQLNRTVLRLLLPDHDIEDVGAKAMGNMLRANNTLQHLDLRGNEITAEGAAAISD 131

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    SL  L L    L  AGA +IA+ L  N +L+ + L  N I  +GG  L++A+  
Sbjct: 132 ALYGHESLEHLGLSSNKLGDAGAKAIAQVLPYNISLKYLGLANNGIGEEGGKALLEAILQ 191

Query: 121 KTKLKQINVSENQFGEEGVEEME 143
              L  + + +N   +E ++++ 
Sbjct: 192 NRSLVMVQLVKNDIPKEILDKIR 214


>gi|320168146|gb|EFW45045.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 645

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH-DCYESSKK 288
           LDL     G    + +A+ ++ +    + ELKL  N +   G + +++A+  +C      
Sbjct: 25  LDLCKKQIGNADAKAVAEAIKVNTT--MTELKLGGNLIADVGARAIAEAVRANC------ 76

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
                 L V     NR+ + GA+  A   K   TL ++++ +N I   G  A+++A + N
Sbjct: 77  -----TLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDAGAQAIAEALKVN 131

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
           K L  L L  N I   GA  +  AL    +L  L L    +   GA +IA+ L  NTTL 
Sbjct: 132 KTLTVLYLWHNQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQAIAEALEVNTTLT 191

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            + L  N+I+  G   L +A+K  T L ++ + ENQ G+ G   + + +K
Sbjct: 192 KLYLWENQITCTGAQALAEALKANTTLTELTLGENQIGDAGARAIAEALK 241



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 28/165 (16%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  V++ +N I   G  A ++  + N  L  L+LN+N I   GA  + +AL    +L +
Sbjct: 77  TLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDAGAQAIAEALKVNKTLTV 136

Query: 71  LNLG-------------DCL---------------LKSAGASSIAKYLTDNTTLEDVNLT 102
           L L              D L               +   GA +IA+ L  NTTL  + L 
Sbjct: 137 LYLWHNQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQAIAEALEVNTTLTKLYLW 196

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N+I+  G   L +A+K  T L ++ + ENQ G+ G   + + +K
Sbjct: 197 ENQITCTGAQALAEALKANTTLTELTLGENQIGDAGARAIAEALK 241



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 12/188 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +++    L  +DL++N  G  G    A+ L+ +    L +L LN N +G  G + +++AL
Sbjct: 71  AVRANCTLTVVDLAENRIGDAGARAFAETLKVNNT--LTKLDLNENQIGDAGAQAIAEAL 128

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
               + +K       L V     N++   GA+ +A   K   TL  + + +N I   G  
Sbjct: 129 ----KVNK------TLTVLYLWHNQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQ 178

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A E N  L  L L +N IT  GA  L +AL    +L  L LG+  +  AGA +IA+
Sbjct: 179 AIAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTTLTELTLGENQIGDAGARAIAE 238

Query: 400 YLTDNTTL 407
            L  N TL
Sbjct: 239 ALKVNETL 246



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 84/172 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  +++  N I  VG  A+++A   N  L  ++L +N I   GA    + L    +L  
Sbjct: 49  TMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLAENRIGDAGARAFAETLKVNNTLTK 108

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L +  +  AGA +IA+ L  N TL  + L  N+I   G   +  A+K  T L ++ + 
Sbjct: 109 LDLNENQIGDAGAQAIAEALKVNKTLTVLYLWHNQIGAAGAQAIADALKVNTTLTELYLY 168

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
           +N  G++G + + + ++       L L +++  C+  +   E+ + N +  E
Sbjct: 169 KNPIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTTLTE 220



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 17/264 (6%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L D  E+  +L  L+L    I    A  + +A+    ++  L LG  L+   GA +IA+ 
Sbjct: 14  LFDMVEDASQL--LDLCKKQIGNADAKAVAEAIKVNTTMTELKLGGNLIADVGARAIAEA 71

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           +  N TL  V+L  N I   G     + +K    L +++++ENQ G+ G + + + +K  
Sbjct: 72  VRANCTLTVVDLAENRIGDAGARAFAETLKVNNTLTKLDLNENQIGDAGAQAIAEALKVN 131

Query: 150 GMAAALVLEDDEGECSDEEQDEESEEENDSDAE--------GDNSNLSHNDSNHSHNASN 201
                L L  ++   +  +   ++ + N +  E        GD+   +  ++   +    
Sbjct: 132 KTLTVLYLWHNQIGAAGAQAIADALKVNTTLTELYLYKNPIGDDGAQAIAEALEVNTTLT 191

Query: 202 QSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEEL 260
           + +   NQ   T  Q+   +LK    L EL L +N  G  G   +A+ L+ +       +
Sbjct: 192 KLYLWENQITCTGAQALAEALKANTTLTELTLGENQIGDAGARAIAEALKVNETLT---M 248

Query: 261 KLNNNGL---GITGCKLLSKALHD 281
            LNNN L   GI   +    A+ D
Sbjct: 249 LLNNNFLTTDGIAAFRQTGNAICD 272



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + N  +  L L  N I   GA  + +A+    +L +++L +  +  AGA + A+
Sbjct: 39  AVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLAENRIGDAGARAFAE 98

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKT 122
            L  N TL  ++L  N+I   G   + +A+K NKT
Sbjct: 99  TLKVNNTLTKLDLNENQIGDAGAQAIAEALKVNKT 133


>gi|384245065|gb|EIE18561.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
          Length = 669

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 87/329 (26%)

Query: 219 MSLKTGA----RLVELDLSDNAFGPIGVEGLA---------------------------- 246
           M + +GA    +L  L+LSDNA G  GV   A                            
Sbjct: 184 MRIISGALAQVQLRSLNLSDNALGEKGVRAFAAAISDQACLTPFTNCSARRKAFVAVLSS 243

Query: 247 -DLLRSSCCFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNR 304
             L    CC A L+ L   N G  I  C+ ++       E  +  G   AL ++    N 
Sbjct: 244 RGLAADPCCLAGLQRLAFQNVGCSIHACQAVA-------ELVQHSGDLRALHLY---NNM 293

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
            ++EGA  +A +  +   +E   M  + +   G  AL+       +L  L+L+DN +T +
Sbjct: 294 SDDEGAIAIAQILSRAPVMEDFRMASSRVGAEGGIALAQGLSAGSSLLKLDLSDNPMTAE 353

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ---- 420
            A  L +A+    SL +LNL D  L   G   IA+ L  N  L +++L  NE++ +    
Sbjct: 354 VAPALAEAVRGQESLQLLNLNDVALGDEGIEGIAEALPAN--LVELHLALNEVTPEGASA 411

Query: 421 ------------------------------------GGLDLVKAMKNK-TKLKQINVSEN 443
                                               G + L KA+ +   KL+++++ +N
Sbjct: 412 LAASLGRLGRLQVLGLRENELENDGAAAIAAAIGRLGAVALAKAVASSGAKLERLDLDDN 471

Query: 444 QFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           Q  E G+++++++++  G++ AL LED++
Sbjct: 472 QISEGGIDQIKEILERAGLSHALSLEDND 500



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 9/224 (4%)

Query: 231 DLSDNAFGPIGVEGLADLLRSSCCFA---LEELKLNNNGLGITGCKLLSKALHDCYESSK 287
           DLSD   G    E L  +   S   A   L  L L++N LG  G +  + A+ D    + 
Sbjct: 167 DLSDIIAGRPEAEALEAMRIISGALAQVQLRSLNLSDNALGEKGVRAFAAAISDQACLTP 226

Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
                   K F+A    L + G   LAA    L  L+R+     G       A+++  + 
Sbjct: 227 FTNCSARRKAFVA---VLSSRG---LAADPCCLAGLQRLAFQNVGCSIHACQAVAELVQH 280

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
           + +LR L+L +N    +GAI + Q LS+ P +    +    + + G  ++A+ L+  ++L
Sbjct: 281 SGDLRALHLYNNMSDDEGAIAIAQILSRAPVMEDFRMASSRVGAEGGIALAQGLSAGSSL 340

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
             ++L+ N ++ +    L +A++ +  L+ +N+++   G+EG+E
Sbjct: 341 LKLDLSDNPMTAEVAPALAEAVRGQESLQLLNLNDVALGDEGIE 384



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 43/201 (21%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  +   +E   M  + +   G  AL+        L  L+L+DN +T + A  L +A
Sbjct: 302 IAQILSRAPVMEDFRMASSRVGAEGGIALAQGLSAGSSLLKLDLSDNPMTAEVAPALAEA 361

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG---------- 111
           +    SL +LNL D  L   G   IA+ L  N  L +++L  NE++ +G           
Sbjct: 362 VRGQESLQLLNLNDVALGDEGIEGIAEALPAN--LVELHLALNEVTPEGASALAASLGRL 419

Query: 112 ------------------------------LDLVKAMKNK-TKLKQINVSENQFGEEGVE 140
                                         + L KA+ +   KL+++++ +NQ  E G++
Sbjct: 420 GRLQVLGLRENELENDGAAAIAAAIGRLGAVALAKAVASSGAKLERLDLDDNQISEGGID 479

Query: 141 EMEKLMKSFGMAAALVLEDDE 161
           +++++++  G++ AL LED++
Sbjct: 480 QIKEILERAGLSHALSLEDND 500



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 64/112 (57%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++  + +  LR L+L +N    +GAI + Q LS+ P +    +    + + G  ++A+
Sbjct: 273 AVAELVQHSGDLRALHLYNNMSDDEGAIAIAQILSRAPVMEDFRMASSRVGAEGGIALAQ 332

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
            L+  ++L  ++L+ N ++ +    L +A++ +  L+ +N+++   G+EG+E
Sbjct: 333 GLSAGSSLLKLDLSDNPMTAEVAPALAEAVRGQESLQLLNLNDVALGDEGIE 384


>gi|399497946|emb|CCG20301.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  LS A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LSKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNVNLISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNVNLISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|348517451|ref|XP_003446247.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Oreochromis niloticus]
          Length = 941

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            +E L L NN +   G +L+++ + +C +          L+V   G+N++ + G + LA 
Sbjct: 745 VVEVLGLYNNNITDAGARLVAQIIEECPK----------LRVLKIGKNKITSVGGRHLAN 794

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
             KK  ++  V M  N I   G  A  +A   + +L +L+L+ N IT +G   L +AL +
Sbjct: 795 AIKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGLAEALKE 854

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L I  L +  +    A  +A  +  NT L  + L  N+ +V+G   L +A+ +   L
Sbjct: 855 NTALRIFWLVENEMTDDAAPHLADMIQANTGLTHLWLISNQFTVEGIRQLAEALTHNKGL 914

Query: 436 KQINVSENQFGEE 448
           K+I V  N+  EE
Sbjct: 915 KEICVKGNRLSEE 927



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 79/151 (52%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + + GA+++A + ++   L  +++ +N I  VG   L++A +++ ++  + +  N+I 
Sbjct: 754 NNITDAGARLVAQIIEECPKLRVLKIGKNKITSVGGRHLANAIKKSSSIFDVGMWGNSIG 813

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA   G+AL   PSL  L+L    + S G   +A+ L +NT L    L  NE++    
Sbjct: 814 DEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGLAEALKENTALRIFWLVENEMTDDAA 873

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             L   ++  T L  + +  NQF  EG+ ++
Sbjct: 874 PHLADMIQANTGLTHLWLISNQFTVEGIRQL 904



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 72/142 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A + ++   L  +++ +N I  VG   L++A +++  +  + +  N+I  +GA   G+
Sbjct: 763 LVAQIIEECPKLRVLKIGKNKITSVGGRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGE 822

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL   PSL  L+L    + S G   +A+ L +NT L    L  NE++      L   ++ 
Sbjct: 823 ALRNHPSLTNLSLSANCITSRGGRGLAEALKENTALRIFWLVENEMTDDAAPHLADMIQA 882

Query: 121 KTKLKQINVSENQFGEEGVEEM 142
            T L  + +  NQF  EG+ ++
Sbjct: 883 NTGLTHLWLISNQFTVEGIRQL 904



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 76/157 (48%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N L +   ++LA    K K +E + +  N I   G   ++   EE   LR L +  N IT
Sbjct: 726 NHLSDRSIEILAEELCKHKVVEVLGLYNNNITDAGARLVAQIIEECPKLRVLKIGKNKIT 785

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   L  A+ K  S+  + +    +   GA +  + L ++ +L +++L+ N I+ +GG
Sbjct: 786 SVGGRHLANAIKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGG 845

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             L +A+K  T L+   + EN+  ++    +  ++++
Sbjct: 846 RGLAEALKENTALRIFWLVENEMTDDAAPHLADMIQA 882



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 66/136 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   KK  ++  V M  N I   G  A  +A   +  L +L+L+ N IT +G   L +A
Sbjct: 792 LANAIKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGLAEA 851

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L I  L +  +    A  +A  +  NT L  + L  N+ +V+G   L +A+ + 
Sbjct: 852 LKENTALRIFWLVENEMTDDAAPHLADMIQANTGLTHLWLISNQFTVEGIRQLAEALTHN 911

Query: 122 TKLKQINVSENQFGEE 137
             LK+I V  N+  EE
Sbjct: 912 KGLKEICVKGNRLSEE 927



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 73/148 (49%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA    K K +E + +  N I   G   ++   EE  KLR L +  N IT  G   L  
Sbjct: 735 ILAEELCKHKVVEVLGLYNNNITDAGARLVAQIIEECPKLRVLKIGKNKITSVGGRHLAN 794

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A+ K  S+  + +    +   GA +  + L ++ +L +++L+ N I+ +GG  L +A+K 
Sbjct: 795 AIKKSSSIFDVGMWGNSIGDEGAEAFGEALRNHPSLTNLSLSANCITSRGGRGLAEALKE 854

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
            T L+   + EN+  ++    +  ++++
Sbjct: 855 NTALRIFWLVENEMTDDAAPHLADMIQA 882


>gi|405978624|gb|EKC43001.1| Leucine-rich repeat-containing protein 34 [Crassostrea gigas]
          Length = 425

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 123/252 (48%), Gaps = 27/252 (10%)

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
           + +L+    +  LDL  N     G + +A L+  S   ++ ++ L +N +G  G ++L++
Sbjct: 70  YKTLQNNLYVTSLDLRFNNITDEGAKHIAKLIEESA--SIRDINLMSNDIGPEGGEILAR 127

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           AL           +  +LK      N++ N G   LA + +   TLE +++    +    
Sbjct: 128 ALQ----------TNESLKALRLTGNKIGNRGGMALAQMLQVNTTLEALDVADCDLTIES 177

Query: 338 ITALSDAFEENKNLRHLNLN---------DNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
           + ALS    +NK L+ LN+N         + T+ Y   + +  ++ ++      +L    
Sbjct: 178 VIALSTVLHQNKTLKALNVNRPLLFTQQEETTVHYAKMLKVNTSIEEI------HLQKYD 231

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           ++  GA+ +A+ L  N TL+ +NL+CN I+  G L++ K +K  T ++ +++  N+  ++
Sbjct: 232 MRDFGATRLAENLMQNNTLKCLNLSCNRITRDGALEISKVLKENTAIEVLDLGYNRLEDD 291

Query: 449 GVEEMEKLMKSF 460
           G   + + +K++
Sbjct: 292 GACHIAEALKTY 303



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 24/260 (9%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           ++  A + +++L  N  GP G E LA  L+++   +L+ L+L  N +G  G   L++ L 
Sbjct: 101 IEESASIRDINLMSNDIGPEGGEILARALQTN--ESLKALRLTGNKIGNRGGMALAQMLQ 158

Query: 281 -----------DC---YESSKKEGSPL----ALKVFIAGRNRL---ENEGAKMLAAVFKK 319
                      DC    ES     + L     LK     R  L   + E     A + K 
Sbjct: 159 VNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNRPLLFTQQEETTVHYAKMLKV 218

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             ++E + + +  +   G T L++   +N  L+ LNL+ N IT  GA+ + + L +  ++
Sbjct: 219 NTSIEEIHLQKYDMRDFGATRLAENLMQNNTLKCLNLSCNRITRDGALEISKVLKENTAI 278

Query: 380 AILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
            +L+LG   L+  GA  IA+ L T NT L+ + ++ N I  +G   L  A+K  T LKQI
Sbjct: 279 EVLDLGYNRLEDDGACHIAEALKTYNTNLQTLVVSFNNIGNKGLCALADALKVNTSLKQI 338

Query: 439 NVSENQFGEEGVEEMEKLMK 458
            +  N+  E        L++
Sbjct: 339 FIWGNKLEEPATIAFASLLE 358



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A + K   ++E + + +  +   G T L++   +N  L+ LNL+ N IT  GA+ + + L
Sbjct: 213 AKMLKVNTSIEEIHLQKYDMRDFGATRLAENLMQNNTLKCLNLSCNRITRDGALEISKVL 272

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            +  ++ +L+LG   L+  GA  IA+ L T NT L+ + ++ N I  +G   L  A+K  
Sbjct: 273 KENTAIEVLDLGYNRLEDDGACHIAEALKTYNTNLQTLVVSFNNIGNKGLCALADALKVN 332

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T LKQI +  N+  E        L++
Sbjct: 333 TSLKQIFIWGNKLEEPATIAFASLLE 358



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 37/297 (12%)

Query: 82  GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
           GA  IAK + ++ ++ D+NL  N+I  +GG  L +A++    LK + ++ N+ G  G   
Sbjct: 93  GAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALRLTGNKIGNRG--- 149

Query: 142 MEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN----SNLSHNDSNHSH 197
                   GMA A +L+ +           E+ +  D D   ++    S + H +     
Sbjct: 150 --------GMALAQMLQVN--------TTLEALDVADCDLTIESVIALSTVLHQNKTLKA 193

Query: 198 NASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
              N+    + Q   T + + M LK    + E+ L        G   LA+ L  +    L
Sbjct: 194 LNVNRPLLFTQQEETTVHYAKM-LKVNTSIEEIHLQKYDMRDFGATRLAENLMQNN--TL 250

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
           + L L+ N +   G   +SK L        KE +  A++V   G NRLE++GA  +A   
Sbjct: 251 KCLNLSCNRITRDGALEISKVL--------KENT--AIEVLDLGYNRLEDDGACHIAEAL 300

Query: 318 KKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           K   T L+ + +  N I + G+ AL+DA + N +L+ + +  N +     I     L
Sbjct: 301 KTYNTNLQTLVVSFNNIGNKGLCALADALKVNTSLKQIFIWGNKLEEPATIAFASLL 357



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 81/157 (51%), Gaps = 15/157 (9%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLN---------DNTITY 52
           LA + +   TLE +++    +    + ALS    +NK L+ LN+N         + T+ Y
Sbjct: 153 LAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNRPLLFTQQEETTVHY 212

Query: 53  KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 112
              + +  ++ ++      +L    ++  GA+ +A+ L  N TL+ +NL+CN I+  G L
Sbjct: 213 AKMLKVNTSIEEI------HLQKYDMRDFGATRLAENLMQNNTLKCLNLSCNRITRDGAL 266

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           ++ K +K  T ++ +++  N+  ++G   + + +K++
Sbjct: 267 EISKVLKENTAIEVLDLGYNRLEDDGACHIAEALKTY 303



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 15/186 (8%)

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALK----VFIAGRNRLENEGAKMLAAVFKKLKT 322
           LG+T    + K L       +KE +    K    +++AG N+L  +   +   +    KT
Sbjct: 18  LGVTPNPYIVKMLE-----KEKEETVFEFKENMHLYLAGNNQLLTDKRLVDQDMLVLYKT 72

Query: 323 LE------RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
           L+       +++  N I   G   ++   EE+ ++R +NL  N I  +G   L +AL   
Sbjct: 73  LQNNLYVTSLDLRFNNITDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTN 132

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            SL  L L    + + G  ++A+ L  NTTLE +++   +++++  + L   +     LK
Sbjct: 133 ESLKALRLTGNKIGNRGGMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLK 192

Query: 437 QINVSE 442
            +NV+ 
Sbjct: 193 ALNVNR 198



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 11/77 (14%)

Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
           GA  IAK + ++ ++ D+NL  N+I  +GG  L +A++    LK + ++ N+ G  G   
Sbjct: 93  GAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALRLTGNKIGNRG--- 149

Query: 453 MEKLMKSFGMAAALVLE 469
                   GMA A +L+
Sbjct: 150 --------GMALAQMLQ 158



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G   ++   EE+  +R +NL  N I  +G   L +AL    SL  L L    + 
Sbjct: 87  NNITDEGAKHIAKLIEESASIRDINLMSNDIGPEGGEILARALQTNESLKALRLTGNKIG 146

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           + G  ++A+ L  NTTLE +++   +++++  + L   +     LK +NV+ 
Sbjct: 147 NRGGMALAQMLQVNTTLEALDVADCDLTIESVIALSTVLHQNKTLKALNVNR 198


>gi|168026804|ref|XP_001765921.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682827|gb|EDQ69242.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 540

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 61/289 (21%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G++L  L+LSDNA G  GV   + LL S    +LE L   NNG+ +      ++A+ +  
Sbjct: 212 GSKLKSLNLSDNALGEKGVRAFSALLGSQN--SLEALSFMNNGISVDA----ARAIREIL 265

Query: 284 ESSKK------------------------EGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
            SSK+                         G+PL L+ F    +R+ +EG   L    + 
Sbjct: 266 PSSKELRTLRFHNNMTGDEGALELATEVVGGAPL-LEHFQFSSSRVGSEGGVALMEALQA 324

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND--------------------- 358
            K+L+ +++  N     G  AL+ A   +  L+ + L+D                     
Sbjct: 325 GKSLKIIDIRDNMYGPEGGAALALALRSHTMLKEVYLSDLGLEDEGALAVVKALTEASSQ 384

Query: 359 --------NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLED 409
                   N IT K A  L   +  +  L  LNL +  LK +G  +++  + +    L +
Sbjct: 385 VTILELGGNEITEKVAPALATCIRSMRHLTRLNLMENELKDSGVVTVSTAIGEGLENLRE 444

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           ++L+ NE+S  G L   +A+ NK   K +N++ NQ  E+GVE ++++++
Sbjct: 445 LDLSVNELSRIGALAAAQAVGNKKHFKHLNLNGNQISEQGVEAVQEMLR 493



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+ G  L  +D+ DN +GP G   LA  LRS     L+E+ L++ GL   G   + KAL
Sbjct: 321 ALQAGKSLKIIDIRDNMYGPEGGAALALALRSHTM--LKEVYLSDLGLEDEGALAVVKAL 378

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +   SS+       + +   G N +  + A  LA   + ++ L R+ + +N +   G+ 
Sbjct: 379 TEA--SSQ-------VTILELGGNEITEKVAPALATCIRSMRHLTRLNLMENELKDSGVV 429

Query: 340 ALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            +S A  E  +NLR L+L+ N ++  GA+   QA+        LNL    +   G  ++ 
Sbjct: 430 TVSTAIGEGLENLRELDLSVNELSRIGALAAAQAVGNKKHFKHLNLNGNQISEQGVEAVQ 489

Query: 399 KYLTDNTTLEDV 410
           + L  +    DV
Sbjct: 490 EMLRKSVAGVDV 501



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 2/148 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA   +    L+ V +   G+   G  A+  A  E + ++  L L  N IT K A  L  
Sbjct: 346 LALALRSHTMLKEVYLSDLGLEDEGALAVVKALTEASSQVTILELGGNEITEKVAPALAT 405

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMK 119
            +  +  L  LNL +  LK +G  +++  + +    L +++L+ NE+S  G L   +A+ 
Sbjct: 406 CIRSMRHLTRLNLMENELKDSGVVTVSTAIGEGLENLRELDLSVNELSRIGALAAAQAVG 465

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
           NK   K +N++ NQ  E+GVE ++++++
Sbjct: 466 NKKHFKHLNLNGNQISEQGVEAVQEMLR 493



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LEH +   + +   G  AL +A +  K L+ +++ DN    +G   L  AL     L  +
Sbjct: 300 LEHFQFSSSRVGSEGGVALMEALQAGKSLKIIDIRDNMYGPEGGAALALALRSHTMLKEV 359

Query: 72  NLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L D  L+  GA ++ K LT+ ++ +  + L  NEI+ +    L   +++   L ++N+ 
Sbjct: 360 YLSDLGLEDEGALAVVKALTEASSQVTILELGGNEITEKVAPALATCIRSMRHLTRLNLM 419

Query: 131 ENQFGEEGV 139
           EN+  + GV
Sbjct: 420 ENELKDSGV 428



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 3/166 (1%)

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           SS  EGS L  K      N L  +G +  +A+     +LE +    NGI      A+ + 
Sbjct: 207 SSALEGSKL--KSLNLSDNALGEKGVRAFSALLGSQNSLEALSFMNNGISVDAARAIREI 264

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLG-QALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
              +K LR L  ++N    +GA+ L  + +   P L         + S G  ++ + L  
Sbjct: 265 LPSSKELRTLRFHNNMTGDEGALELATEVVGGAPLLEHFQFSSSRVGSEGGVALMEALQA 324

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             +L+ +++  N    +GG  L  A+++ T LK++ +S+    +EG
Sbjct: 325 GKSLKIIDIRDNMYGPEGGAALALALRSHTMLKEVYLSDLGLEDEG 370



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLG-Q 60
            +A+     +LE +    NGI      A+ +    +K+LR L  ++N    +GA+ L  +
Sbjct: 233 FSALLGSQNSLEALSFMNNGISVDAARAIREILPSSKELRTLRFHNNMTGDEGALELATE 292

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            +   P L         + S G  ++ + L    +L+ +++  N    +GG  L  A+++
Sbjct: 293 VVGGAPLLEHFQFSSSRVGSEGGVALMEALQAGKSLKIIDIRDNMYGPEGGAALALALRS 352

Query: 121 KTKLKQINVSENQFGEEG 138
            T LK++ +S+    +EG
Sbjct: 353 HTMLKEVYLSDLGLEDEG 370


>gi|290989301|ref|XP_002677276.1| predicted protein [Naegleria gruberi]
 gi|284090883|gb|EFC44532.1| predicted protein [Naegleria gruberi]
          Length = 881

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 40/238 (16%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L T   ++ELDLSDN         L D+L+ +    L++    NN LG  G   +    
Sbjct: 105 ALTTNKHILELDLSDNNLTEEISSYLGDMLKRNTV--LQKFTCGNNKLGDQGISYI---- 158

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
           + C  S+     P +L  +I  R    +  A  L++VF       R+++           
Sbjct: 159 YQCIGSN-----PFSLVNYIDLRGNRISSAAAYLSSVFAS----NRIQI----------- 198

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
                         LNL +N I  +GA  +   L    SL +LNL    +   GAS IAK
Sbjct: 199 --------------LNLQNNLIDEEGAKVIAFELMNNTSLKVLNLQHNKIGDKGASHIAK 244

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            L  N TL++++L  N ISV+G   LV  +K+   L ++N+  N  G+ G     K +
Sbjct: 245 MLASNITLQELDLGSNRISVEGASSLVTGLKSNKSLLKLNLRSNIMGDPGAYMFSKCL 302



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           LS  F  N+ ++ LNL +N I  +GA  +   L    SL +LNL    +   GAS IAK 
Sbjct: 187 LSSVFASNR-IQILNLQNNLIDEEGAKVIAFELMNNTSLKVLNLQHNKIGDKGASHIAKM 245

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
           L  N TL++++L  N ISV+G   LV  +K+   L ++N+  N  G+ G     K +
Sbjct: 246 LASNITLQELDLGSNRISVEGASSLVTGLKSNKSLLKLNLRSNIMGDPGAYMFSKCL 302



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L+ + +  N I   G + ++     N  L+ L+L  N I+ +GA  L   L    SL  
Sbjct: 223 SLKVLNLQHNKIGDKGASHIAKMLASNITLQELDLGSNRISVEGASSLVTGLKSNKSLLK 282

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           LNL   ++   GA   +K LT N+  LE++ L  N  ++ G + L   +K   +LK+ ++
Sbjct: 283 LNLRSNIMGDPGAYMFSKCLTQNSNFLEELYLGFNGFTIDGAVALSNMLKTNNRLKKFDI 342



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           + ILNL + L+   GA  IA  L +NT+L+ +NL  N+I  +G   + K + +   L+++
Sbjct: 196 IQILNLQNNLIDEEGAKVIAFELMNNTSLKVLNLQHNKIGDKGASHIAKMLASNITLQEL 255

Query: 128 NVSENQFGEEGVEEMEKLMKS 148
           ++  N+   EG   +   +KS
Sbjct: 256 DLGSNRISVEGASSLVTGLKS 276


>gi|320164062|gb|EFW40961.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 467

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 13/243 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    +  L L +N  G  G   +A+ L+ +   A+    L+ N +G  G K +++AL
Sbjct: 37  ALKVNTTVTRLHLYENQIGDDGARAIAEALKFNTVTAV---ALSQNAIGNAGAKAIAEAL 93

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
               +++K       +K    G N++ + GA+ +A   K   TL  +++ +N     G  
Sbjct: 94  ----KTNK------TVKELFLGENQISDSGAQAIAEALKVNTTLTELDLQRNPTGVAGAR 143

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++ A +    L  L+L+ N I   GA  + +AL    S+  L LG   +  AGA +IA+
Sbjct: 144 AIAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTLGLGWNQIGDAGAQAIAE 203

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  NTT+  ++L  NEI   G   + +A+K  + L ++++  N     GV+ + +  K 
Sbjct: 204 ALKVNTTMTSLHLAYNEIGDAGAQAIAEALKVNSTLTELDLYANGISNIGVQVICEAYKI 263

Query: 460 FGM 462
            GM
Sbjct: 264 NGM 266



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL----- 62
           K  T+  V + QN I + G  A+++A + NK ++ L L +N I+  GA  + +AL     
Sbjct: 67  KFNTVTAVALSQNAIGNAGAKAIAEALKTNKTVKELFLGENQISDSGAQAIAEALKVNTT 126

Query: 63  ------SKLPS-----------------LAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
                  + P+                 L  L+L    +   GA +IA+ L  N ++  +
Sbjct: 127 LTELDLQRNPTGVAGARAIAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTL 186

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            L  N+I   G   + +A+K  T +  ++++ N+ G+ G + + + +K
Sbjct: 187 GLGWNQIGDAGAQAIAEALKVNTTMTSLHLAYNEIGDAGAQAIAEALK 234



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 32/278 (11%)

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+     L  AGA ++A+ L  NTT+  ++L  N+I   G   + +A+K  T +  + +S
Sbjct: 19  LSWSRWQLGDAGAQALAEALKVNTTVTRLHLYENQIGDDGARAIAEALKFNT-VTAVALS 77

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
           +N  G  G + + + +K+      L L         E Q  +S  +  ++A   N+ L+ 
Sbjct: 78  QNAIGNAGAKAIAEALKTNKTVKELFL--------GENQISDSGAQAIAEALKVNTTLTE 129

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
            D   +                 +     +LK    L  L L  N  G  G + +A+ L+
Sbjct: 130 LDLQRNPTGV-----------AGARAIAAALKVTTTLTWLSLDQNQIGDTGAQAIAEALK 178

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +   ++  L L  N +G  G + +++AL       K   +  +L +     N + + GA
Sbjct: 179 INA--SVTTLGLGWNQIGDAGAQAIAEAL-------KVNTTMTSLHL---AYNEIGDAGA 226

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
           + +A   K   TL  +++  NGI ++G+  + +A++ N
Sbjct: 227 QAIAEALKVNSTLTELDLYANGISNIGVQVICEAYKIN 264



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 28/178 (15%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDN------------- 48
           +A   K  KT++ + + +N I   G  A+++A + N  L  L+L  N             
Sbjct: 89  IAEALKTNKTVKELFLGENQISDSGAQAIAEALKVNTTLTELDLQRNPTGVAGARAIAAA 148

Query: 49  -----TITY----------KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 93
                T+T+           GA  + +AL    S+  L LG   +  AGA +IA+ L  N
Sbjct: 149 LKVTTTLTWLSLDQNQIGDTGAQAIAEALKINASVTTLGLGWNQIGDAGAQAIAEALKVN 208

Query: 94  TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
           TT+  ++L  NEI   G   + +A+K  + L ++++  N     GV+ + +  K  GM
Sbjct: 209 TTMTSLHLAYNEIGDAGAQAIAEALKVNSTLTELDLYANGISNIGVQVICEAYKINGM 266


>gi|290994500|ref|XP_002679870.1| predicted protein [Naegleria gruberi]
 gi|284093488|gb|EFC47126.1| predicted protein [Naegleria gruberi]
          Length = 344

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 84/165 (50%)

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
            LK    G N++  EGA++L    K  +TL ++ +  N +  VGI +++DA   N +L  
Sbjct: 30  VLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHLGGNKVDVVGIKSIADALINNTSLTS 89

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           L L DN I   G   L + L     L+ + L    +K+ GAS ++  L  N +L+ + L 
Sbjct: 90  LGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSIKAMGASCLSTALITNQSLKVLELQ 149

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            N I   G   L +A+K+   +  +N ++N+ G+EG   +  L+K
Sbjct: 150 SNAIGPVGVKSLCQALKDNHSVHALNFNDNELGDEGALYVANLLK 194



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 164/400 (41%), Gaps = 58/400 (14%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K +  +E+  N +       +++  + NK L+ L L DN I  +GA  LG+ L    +L 
Sbjct: 1   KQIISIELFGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLT 60

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+LG   +   G  SIA  L +NT+L  + L  N I   G   L + +K+ T+L  I +
Sbjct: 61  QLHLGGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQL 120

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
             N           K M +  ++ AL+        +++       + N     G  S   
Sbjct: 121 KGNSI---------KAMGASCLSTALI--------TNQSLKVLELQSNAIGPVGVKSLCQ 163

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
               NHS +A                              L+ +DN  G  G   +A+LL
Sbjct: 164 ALKDNHSVHA------------------------------LNFNDNELGDEGALYVANLL 193

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           + +   ++  L L NN +   G   L++AL  C ++        A+     G N + N G
Sbjct: 194 KVN--PSITTLGLANNRIRKKGAVALAEAL-KCEQT--------AVTGLDLGNNEIGNGG 242

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           A  L+A       L  +++    I+  GI ALS+  E N  LRHL+L  N    +GA   
Sbjct: 243 AVALSAALAVNTVLTSLDLRSCEIHLKGILALSNMAETNTTLRHLDLGANYAKNQGASSW 302

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            Q LSK  SL  L L D  +   G  ++A  L  N TL +
Sbjct: 303 AQVLSKNRSLTRLCLTDNQIYHEGGEALAIGLQSNYTLRN 342



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 123/281 (43%), Gaps = 41/281 (14%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L +L L  N    +G++ +AD L ++   +L  L L +NG+G  G K L++ L 
Sbjct: 53  LKHNQTLTQLHLGGNKVDVVGIKSIADALINNT--SLTSLGLRDNGIGSDGMKYLAETL- 109

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                S  + S + LK      N ++  GA  L+      ++L+ +E+  N I  VG+ +
Sbjct: 110 ----KSNTQLSDIQLK-----GNSIKAMGASCLSTALITNQSLKVLELQSNAIGPVGVKS 160

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L  A ++N ++  LN NDN +  +GA+ +   L   PS+  L L +  ++  GA ++A+ 
Sbjct: 161 LCQALKDNHSVHALNFNDNELGDEGALYVANLLKVNPSITTLGLANNRIRKKGAVALAEA 220

Query: 401 L-----------------------------TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
           L                               NT L  ++L   EI ++G L L    + 
Sbjct: 221 LKCEQTAVTGLDLGNNEIGNGGAVALSAALAVNTVLTSLDLRSCEIHLKGILALSNMAET 280

Query: 432 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            T L+ +++  N    +G     +++        L L D++
Sbjct: 281 NTTLRHLDLGANYAKNQGASSWAQVLSKNRSLTRLCLTDNQ 321



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 156/367 (42%), Gaps = 60/367 (16%)

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L LGD  +   GA  + + L  N TL  ++L  N++ V G   +  A+ N T L  + + 
Sbjct: 34  LKLGDNKIGPEGARILGEGLKHNQTLTQLHLGGNKVDVVGIKSIADALINNTSLTSLGLR 93

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
           +N  G +G++ + + +KS                                    N+ LS 
Sbjct: 94  DNGIGSDGMKYLAETLKS------------------------------------NTQLS- 116

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
                      Q   NS ++   S  S  +L T   L  L+L  NA GP+GV+ L   L+
Sbjct: 117 ---------DIQLKGNSIKAMGASCLS-TALITNQSLKVLELQSNAIGPVGVKSLCQALK 166

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +   ++  L  N+N LG  G           Y ++  + +P    + +A  NR+  +GA
Sbjct: 167 DN--HSVHALNFNDNELGDEGA---------LYVANLLKVNPSITTLGLA-NNRIRKKGA 214

Query: 311 KMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
             LA   K  +T +  +++  N I + G  ALS A   N  L  L+L    I  KG + L
Sbjct: 215 VALAEALKCEQTAVTGLDLGNNEIGNGGAVALSAALAVNTVLTSLDLRSCEIHLKGILAL 274

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
                   +L  L+LG    K+ GASS A+ L+ N +L  + LT N+I  +GG  L   +
Sbjct: 275 SNMAETNTTLRHLDLGANYAKNQGASSWAQVLSKNRSLTRLCLTDNQIYHEGGEALAIGL 334

Query: 430 KNKTKLK 436
           ++   L+
Sbjct: 335 QSNYTLR 341



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N L +   +++A + K  K L+R+++  N I   G   L +  + N+ L  L+L  N + 
Sbjct: 11  NELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHLGGNKVD 70

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   +  AL    SL  L L D  + S G   +A+ L  NT L D+ L  N I   G 
Sbjct: 71  VVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSIKAMGA 130

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             L  A+     LK + +  N  G  GV+ + + +K      AL   D+E
Sbjct: 131 SCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNE 180



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 72/147 (48%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L    K  +TL  + +  N +  VGI +++DA   N  L  L L DN I   G   L +
Sbjct: 48  ILGEGLKHNQTLTQLHLGGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAE 107

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L     L+ + L    +K+ GAS ++  L  N +L+ + L  N I   G   L +A+K+
Sbjct: 108 TLKSNTQLSDIQLKGNSIKAMGASCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKD 167

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
              +  +N ++N+ G+EG   +  L+K
Sbjct: 168 NHSVHALNFNDNELGDEGALYVANLLK 194



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 14/234 (5%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL-HDCYE 284
           +++ ++L  N       E +A++L+++    L+ LKL +N +G  G ++L + L H+   
Sbjct: 2   QIISIELFGNELTDACCELVAEMLKTN--KVLKRLKLGDNKIGPEGARILGEGLKHN--- 56

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
                     L     G N+++  G K +A       +L  + +  NGI   G+  L++ 
Sbjct: 57  --------QTLTQLHLGGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAET 108

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            + N  L  + L  N+I   GA  L  AL    SL +L L    +   G  S+ + L DN
Sbjct: 109 LKSNTQLSDIQLKGNSIKAMGASCLSTALITNQSLKVLELQSNAIGPVGVKSLCQALKDN 168

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            ++  +N   NE+  +G L +   +K    +  + ++ N+  ++G   + + +K
Sbjct: 169 HSVHALNFNDNELGDEGALYVANLLKVNPSITTLGLANNRIRKKGAVALAEALK 222



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 71/161 (44%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A + K  K L+ +++  N I   G   L +  + N+ L  L+L  N +   G   +  
Sbjct: 20  LVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLTQLHLGGNKVDVVGIKSIAD 79

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    SL  L L D  + S G   +A+ L  NT L D+ L  N I   G   L  A+  
Sbjct: 80  ALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQLKGNSIKAMGASCLSTALIT 139

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
              LK + +  N  G  GV+ + + +K      AL   D+E
Sbjct: 140 NQSLKVLELQSNAIGPVGVKSLCQALKDNHSVHALNFNDNE 180



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%)

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
           K +  +E+  N +       +++  + NK L+ L L DN I  +GA  LG+ L    +L 
Sbjct: 1   KQIISIELFGNELTDACCELVAEMLKTNKVLKRLKLGDNKIGPEGARILGEGLKHNQTLT 60

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
            L+LG   +   G  SIA  L +NT+L  + L  N I   G   L + +K+ T+L  I +
Sbjct: 61  QLHLGGNKVDVVGIKSIADALINNTSLTSLGLRDNGIGSDGMKYLAETLKSNTQLSDIQL 120

Query: 441 SENQFGEEG 449
             N     G
Sbjct: 121 KGNSIKAMG 129


>gi|72096309|ref|XP_797414.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Strongylocentrotus purpuratus]
          Length = 497

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 10/187 (5%)

Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
           C LLSK +  C +          LK F   R++++++ A++L A      +LE +++  N
Sbjct: 267 CMLLSKCVKKCSQ----------LKKFQLHRSKVDDDKARVLIAHILDHPSLEELDLSHN 316

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
            I   G  A+      +  L  L+L++N I   GA  +G AL K  +L  L+L    +  
Sbjct: 317 IIGDHGARAIGKFLNGHCKLTKLDLSNNRIRSSGAAAIGHALGKNETLKELDLRLNRMGD 376

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            G  +I + L  N TLE +N+  NE+S      L + + +   L  INVS N+ G++G +
Sbjct: 377 EGGQAICRALMKNCTLETINIGSNELSEPTAAALAQILIHNGTLVNINVSCNRLGQDGGK 436

Query: 452 EMEKLMK 458
           ++++ M+
Sbjct: 437 QVQEGME 443



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 72/137 (52%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +LE +++  N I   G  A+      + KL  L+L++N I   GA  +G AL K  +L  
Sbjct: 307 SLEELDLSHNIIGDHGARAIGKFLNGHCKLTKLDLSNNRIRSSGAAAIGHALGKNETLKE 366

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    +   G  +I + L  N TLE +N+  NE+S      L + + +   L  INVS
Sbjct: 367 LDLRLNRMGDEGGQAICRALMKNCTLETINIGSNELSEPTAAALAQILIHNGTLVNINVS 426

Query: 131 ENQFGEEGVEEMEKLMK 147
            N+ G++G +++++ M+
Sbjct: 427 CNRLGQDGGKQVQEGME 443



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 71/136 (52%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N I   G  A+  A  +N+ L+ L+L  N +  +G   + +AL K  +L  +
Sbjct: 336 LTKLDLSNNRIRSSGAAAIGHALGKNETLKELDLRLNRMGDEGGQAICRALMKNCTLETI 395

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           N+G   L    A+++A+ L  N TL ++N++CN +   GG  + + M+    ++  ++  
Sbjct: 396 NIGSNELSEPTAAALAQILIHNGTLVNINVSCNRLGQDGGKQVQEGMEENDVVRDFDLRL 455

Query: 132 NQFGEEGVEEMEKLMK 147
            + G+E    + +++K
Sbjct: 456 TEVGQESEYCINQILK 471



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 85/178 (47%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L+   KK   L+  ++ ++ +       L     ++  L  L+L+ N I   GA  +G+
Sbjct: 269 LLSKCVKKCSQLKKFQLHRSKVDDDKARVLIAHILDHPSLEELDLSHNIIGDHGARAIGK 328

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L+    L  L+L +  ++S+GA++I   L  N TL++++L  N +  +GG  + +A+  
Sbjct: 329 FLNGHCKLTKLDLSNNRIRSSGAAAIGHALGKNETLKELDLRLNRMGDEGGQAICRALMK 388

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEND 178
              L+ IN+  N+  E     + +++   G    + +  +       +Q +E  EEND
Sbjct: 389 NCTLETINIGSNELSEPTAAALAQILIHNGTLVNINVSCNRLGQDGGKQVQEGMEEND 446


>gi|405978407|gb|EKC42798.1| hypothetical protein CGI_10015924 [Crassostrea gigas]
          Length = 421

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 109/222 (49%), Gaps = 18/222 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA- 278
           +L T   +  LDLS N    IG +GL D+LR      L+E   +   L I+  KL SKA 
Sbjct: 122 ALTTNNSVTSLDLSGN---NIGHKGLLDVLR-----MLDE-NTSITYLNISHNKLGSKAV 172

Query: 279 --LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
             L D   S+KK      L +  AG N   ++ A+ +A   ++  TL  + + QN     
Sbjct: 173 IILRDLISSTKK-----ILTLEAAG-NDFNDKDAEQIADGIRQTNTLRSLNLSQNAFQER 226

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G   ++ A EEN +L+ LNL+ N +   GAI +G ALS   +L  L L      + G   
Sbjct: 227 GGEDIAGALEENMSLKELNLSWNHLRLDGAIAVGAALSTNSTLQALYLAWNGFSNCGCQE 286

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           I   L  N+TLE ++L+ N + ++G   L K +   +KL+ +
Sbjct: 287 IGTALQTNSTLELLDLSNNRVGLEGAKWLAKGLMLNSKLRHL 328



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   ++  TL  + + QN     G   ++ A EEN  L+ LNL+ N +   GAI +G A
Sbjct: 203 IADGIRQTNTLRSLNLSQNAFQERGGEDIAGALEENMSLKELNLSWNHLRLDGAIAVGAA 262

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           LS   +L  L L      + G   I   L  N+TLE ++L+ N + ++G   L K +   
Sbjct: 263 LSTNSTLQALYLAWNGFSNCGCQEIGTALQTNSTLELLDLSNNRVGLEGAKWLAKGLMLN 322

Query: 122 TKLKQI 127
           +KL+ +
Sbjct: 323 SKLRHL 328



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 116/297 (39%), Gaps = 60/297 (20%)

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           +IA  LT N ++  ++L+ N I  +G LD+++ +   T +  +N+S N+ G + V  +  
Sbjct: 118 TIAYALTTNNSVTSLDLSGNNIGHKGLLDVLRMLDENTSITYLNISHNKLGSKAVIILRD 177

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSH 204
           L+ S      L LE                + ND DAE                      
Sbjct: 178 LISS--TKKILTLE------------AAGNDFNDKDAE---------------------- 201

Query: 205 NNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNN 264
                      Q    ++    L  L+LS NAF   G E +A  L  +   +L+EL L+ 
Sbjct: 202 -----------QIADGIRQTNTLRSLNLSQNAFQERGGEDIAGALEEN--MSLKELNLSW 248

Query: 265 NGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
           N L + G   +  AL           +   L+      N   N G + +    +   TLE
Sbjct: 249 NHLRLDGAIAVGAAL----------STNSTLQALYLAWNGFSNCGCQEIGTALQTNSTLE 298

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            +++  N +   G   L+     N  LRHL +N N++T  GA  +  A+   P  AI
Sbjct: 299 LLDLSNNRVGLEGAKWLAKGLMLNSKLRHL-MNMNSLTTLGAKTILLAIRDNPESAI 354



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 73/153 (47%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N+L ++   +L  +    K +  +E   N         ++D   +   LR LNL+ N   
Sbjct: 165 NKLGSKAVIILRDLISSTKKILTLEAAGNDFNDKDAEQIADGIRQTNTLRSLNLSQNAFQ 224

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +G   +  AL +  SL  LNL    L+  GA ++   L+ N+TL+ + L  N  S  G 
Sbjct: 225 ERGGEDIAGALEENMSLKELNLSWNHLRLDGAIAVGAALSTNSTLQALYLAWNGFSNCGC 284

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            ++  A++  + L+ +++S N+ G EG + + K
Sbjct: 285 QEIGTALQTNSTLELLDLSNNRVGLEGAKWLAK 317



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 60/115 (52%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           ++D   +   LR LNL+ N    +G   +  AL +  SL  LNL    L+  GA ++   
Sbjct: 203 IADGIRQTNTLRSLNLSQNAFQERGGEDIAGALEENMSLKELNLSWNHLRLDGAIAVGAA 262

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           L+ N+TL+ + L  N  S  G  ++  A++  + L+ +++S N+ G EG + + K
Sbjct: 263 LSTNSTLQALYLAWNGFSNCGCQEIGTALQTNSTLELLDLSNNRVGLEGAKWLAK 317



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%)

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           +++  N I H G+  +    +EN ++ +LN++ N +  K  I L   +S    +  L   
Sbjct: 132 LDLSGNNIGHKGLLDVLRMLDENTSITYLNISHNKLGSKAVIILRDLISSTKKILTLEAA 191

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
                   A  IA  +    TL  +NL+ N    +GG D+  A++    LK++N+S N  
Sbjct: 192 GNDFNDKDAEQIADGIRQTNTLRSLNLSQNAFQERGGEDIAGALEENMSLKELNLSWNHL 251

Query: 446 GEEG 449
             +G
Sbjct: 252 RLDG 255



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 56/124 (45%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +++  N I H G+  +    +EN  + +LN++ N +  K  I L   +S    +  L   
Sbjct: 132 LDLSGNNIGHKGLLDVLRMLDENTSITYLNISHNKLGSKAVIILRDLISSTKKILTLEAA 191

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
                   A  IA  +    TL  +NL+ N    +GG D+  A++    LK++N+S N  
Sbjct: 192 GNDFNDKDAEQIADGIRQTNTLRSLNLSQNAFQERGGEDIAGALEENMSLKELNLSWNHL 251

Query: 135 GEEG 138
             +G
Sbjct: 252 RLDG 255



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 60/132 (45%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++ +  N +    +  L D     KK+  L    N    K A  +   + +  +L  
Sbjct: 156 SITYLNISHNKLGSKAVIILRDLISSTKKILTLEAAGNDFNDKDAEQIADGIRQTNTLRS 215

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL     +  G   IA  L +N +L+++NL+ N + + G + +  A+   + L+ + ++
Sbjct: 216 LNLSQNAFQERGGEDIAGALEENMSLKELNLSWNHLRLDGAIAVGAALSTNSTLQALYLA 275

Query: 131 ENQFGEEGVEEM 142
            N F   G +E+
Sbjct: 276 WNGFSNCGCQEI 287


>gi|168024089|ref|XP_001764569.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684147|gb|EDQ70551.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 169/399 (42%), Gaps = 24/399 (6%)

Query: 82  GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
           G   +A+ L  N + E V+ + N I+  G   L + +   T LK +N+S N  G+EG  E
Sbjct: 50  GFVYLAEGLAFNQSAESVDFSANGITATGIKALSQVLPANTFLKTLNLSGNSIGDEGAAE 109

Query: 142 MEKLMKSFGMAAALVLED----DEGECSDEEQDEESEE-------ENDSDAEGDNSNLSH 190
           +  L++       L L      DEG  +  E  +++E         N  D  G  +    
Sbjct: 110 LAGLLEKNQGITKLQLNSINLGDEGAKAIAEMLKKNEHITTLELNNNVVDFAGFAAIADA 169

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
             +N +   S Q +NN   +   S  +   L+    L EL L  N  G  G+  L   L 
Sbjct: 170 LTTNKTLR-SIQINNNYGGALGGSAFAK-GLQENKSLRELHLHGNDMGNEGIRELMVGLM 227

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           +     +  L + NN +G  G      A H   E  KK  S   L +++   N   ++GA
Sbjct: 228 AHKAGKISNLDIGNNKIGPKG------AFH-VAEYIKKAKSLQWLNLYM---NDFGDQGA 277

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           + +A   K+ +++  +++  N I   G   L+ A ++N  +     + N I   GA  L 
Sbjct: 278 ERIAEALKRNRSIVTIDLGGNNISAEGTAHLAAALKDNSTITTFEFSYNPIGMNGAKVLA 337

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             L     +  L LG C +   GA +IA  L  N T+  ++L  N +   G   L K++K
Sbjct: 338 DTLKFHGKIETLRLGWCQIGVKGAEAIADCLLYNATISTLDLRANSLGDDGAALLAKSLK 397

Query: 431 NKTK-LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
              + L  +++  N+  + G   + + +K+ G AA   L
Sbjct: 398 VVNEHLTSLDLGFNEIRDAGAFALAQALKANGDAAVSTL 436



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 187/471 (39%), Gaps = 69/471 (14%)

Query: 7   KKLKTL----------------------------EHVEMPQNGIYHVGITALSDAFEENK 38
           ++L+T                             E V+   NGI   GI ALS     N 
Sbjct: 31  RELRTFREVDLAGKGFGDEGFVYLAEGLAFNQSAESVDFSANGITATGIKALSQVLPANT 90

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
            L+ LNL+ N+I  +GA  L   L K   +  L L    L   GA +IA+ L  N  +  
Sbjct: 91  FLKTLNLSGNSIGDEGAAELAGLLEKNQGITKLQLNSINLGDEGAKAIAEMLKKNEHITT 150

Query: 99  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
           + L  N +   G   +  A+     L+ I ++ N  G  G     K              
Sbjct: 151 LELNNNVVDFAGFAAIADALTTNKTLRSIQINNNYGGALGGSAFAK-------------- 196

Query: 159 DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH 218
              G   ++   E     ND   EG    +    ++ +   SN    N+      +    
Sbjct: 197 ---GLQENKSLRELHLHGNDMGNEGIRELMVGLMAHKAGKISNLDIGNNKIGPKGAFHVA 253

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
             +K    L  L+L  N FG  G E +A+ L+ +   ++  + L  N +   G   L+ A
Sbjct: 254 EYIKKAKSLQWLNLYMNDFGDQGAERIAEALKRNR--SIVTIDLGGNNISAEGTAHLAAA 311

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK---KLKTLERVEMPQNGIYH 335
           L D             +  F    N +   GAK+LA   K   K++TL R+   Q G+  
Sbjct: 312 LKDNS----------TITTFEFSYNPIGMNGAKVLADTLKFHGKIETL-RLGWCQIGVK- 359

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL-PSLAILNLGDCLLKSAGA 394
            G  A++D    N  +  L+L  N++   GA  L ++L  +   L  L+LG   ++ AGA
Sbjct: 360 -GAEAIADCLLYNATISTLDLRANSLGDDGAALLAKSLKVVNEHLTSLDLGFNEIRDAGA 418

Query: 395 SSIAKYLTDN--TTLEDVNLTCNEISVQGGLDLVKAMKNKTKL---KQINV 440
            ++A+ L  N    +  +NLT N ++  G + L +A  + +++   K++N+
Sbjct: 419 FALAQALKANGDAAVSTLNLTSNFLTKYGQVALTEAKDHVSEMNDGKEVNI 469



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 164/381 (43%), Gaps = 75/381 (19%)

Query: 4   AVFKKLKTLEHV---EMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           A+ + LK  EH+   E+  N +   G  A++DA   NK LR + +N+N   Y GA+    
Sbjct: 137 AIAEMLKKNEHITTLELNNNVVDFAGFAAIADALTTNKTLRSIQINNN---YGGAL---- 189

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL-VKAMK 119
                                G S+ AK L +N +L +++L  N++  +G  +L V  M 
Sbjct: 190 ---------------------GGSAFAKGLQENKSLRELHLHGNDMGNEGIRELMVGLMA 228

Query: 120 NKT-KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEND 178
           +K  K+  +++  N+ G +G   + + +K       L L  ++      E+  E+ + N 
Sbjct: 229 HKAGKISNLDIGNNKIGPKGAFHVAEYIKKAKSLQWLNLYMNDFGDQGAERIAEALKRNR 288

Query: 179 SDAEGD--NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
           S    D   +N+S   + H   A                     LK  + +   + S N 
Sbjct: 289 SIVTIDLGGNNISAEGTAHLAAA---------------------LKDNSTITTFEFSYNP 327

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC--YESSKKEGSPLA 294
            G  G + LAD L+      +E L+L    +G+ G    ++A+ DC  Y ++    S L 
Sbjct: 328 IGMNGAKVLADTLKFHG--KIETLRLGWCQIGVKG----AEAIADCLLYNATI---STLD 378

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--L 351
           L+      N L ++GA +LA   K + + L  +++  N I   G  AL+ A + N +  +
Sbjct: 379 LRA-----NSLGDDGAALLAKSLKVVNEHLTSLDLGFNEIRDAGAFALAQALKANGDAAV 433

Query: 352 RHLNLNDNTITYKGAIPLGQA 372
             LNL  N +T  G + L +A
Sbjct: 434 STLNLTSNFLTKYGQVALTEA 454



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 58/193 (30%)

Query: 318 KKLKTL----------------------------ERVEMPQNGIYHVGITALSDAFEENK 349
           ++L+T                             E V+   NGI   GI ALS     N 
Sbjct: 31  RELRTFREVDLAGKGFGDEGFVYLAEGLAFNQSAESVDFSANGITATGIKALSQVLPANT 90

Query: 350 NLRHLNLNDNTITYKGAIPLG------QALSKLPSLAILNLGDCLLKS------------ 391
            L+ LNL+ N+I  +GA  L       Q ++KL  L  +NLGD   K+            
Sbjct: 91  FLKTLNLSGNSIGDEGAAELAGLLEKNQGITKLQ-LNSINLGDEGAKAIAEMLKKNEHIT 149

Query: 392 -----------AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
                      AG ++IA  LT N TL  + +  N     GG    K ++    L+++++
Sbjct: 150 TLELNNNVVDFAGFAAIADALTTNKTLRSIQINNNYGGALGGSAFAKGLQENKSLRELHL 209

Query: 441 SENQFGEEGVEEM 453
             N  G EG+ E+
Sbjct: 210 HGNDMGNEGIREL 222



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 69/142 (48%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           M+  +  K   + ++++  N I   G   +++  ++ K L+ LNL  N    +GA  + +
Sbjct: 223 MVGLMAHKAGKISNLDIGNNKIGPKGAFHVAEYIKKAKSLQWLNLYMNDFGDQGAERIAE 282

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL +  S+  ++LG   + + G + +A  L DN+T+     + N I + G   L   +K 
Sbjct: 283 ALKRNRSIVTIDLGGNNISAEGTAHLAAALKDNSTITTFEFSYNPIGMNGAKVLADTLKF 342

Query: 121 KTKLKQINVSENQFGEEGVEEM 142
             K++ + +   Q G +G E +
Sbjct: 343 HGKIETLRLGWCQIGVKGAEAI 364



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 1/157 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ +++  +++  N I   G   L+ A ++N  +     + N I   GA  L   
Sbjct: 280 IAEALKRNRSIVTIDLGGNNISAEGTAHLAAALKDNSTITTFEFSYNPIGMNGAKVLADT 339

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     +  L LG C +   GA +IA  L  N T+  ++L  N +   G   L K++K  
Sbjct: 340 LKFHGKIETLRLGWCQIGVKGAEAIADCLLYNATISTLDLRANSLGDDGAALLAKSLKVV 399

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
            + L  +++  N+  + G   + + +K+ G AA   L
Sbjct: 400 NEHLTSLDLGFNEIRDAGAFALAQALKANGDAAVSTL 436


>gi|145344361|ref|XP_001416703.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576929|gb|ABO94996.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 466

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 18/233 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL-HDCYES 285
           L  +DL+ N FG  G    AD L       L  L L  N +G  G + L +AL H   E 
Sbjct: 213 LRRIDLAHNGFGDRGAIAFADALSRGTAPNLRVLLLGFNSIGPDGMRALMQALMHTDVEH 272

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI----YHVGITAL 341
                          G N +   GAK +A +    + L+ + +  N I       G+TAL
Sbjct: 273 ------------LDVGCNVIGASGAKAIAEMINSTR-LKSLNLACNNIGLRGERSGLTAL 319

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           + A E+NK L  LNL  N +    A  +   L +  +L  LN+G   L   GA  IA+ L
Sbjct: 320 AKALEKNKTLEILNLRGNALHTNCAQDIADVLLEETALIQLNVGYNELYDNGAWEIAEAL 379

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            +NTTL  ++   NE++  G  ++ K +   + +++I++  N    EGV +++
Sbjct: 380 EENTTLLGLDFQRNEVTDAGASNIAKTLAVNSIIQEIDLRSNMISSEGVAKLQ 432



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 64/118 (54%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+TAL+ A E+NK L  LNL  N +    A  +   L +  +L  LN+G   L   GA  
Sbjct: 315 GLTALAKALEKNKTLEILNLRGNALHTNCAQDIADVLLEETALIQLNVGYNELYDNGAWE 374

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
           IA+ L +NTTL  ++   NE++  G  ++ K +   + +++I++  N    EGV +++
Sbjct: 375 IAEALEENTTLLGLDFQRNEVTDAGASNIAKTLAVNSIIQEIDLRSNMISSEGVAKLQ 432



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 17/169 (10%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN-----KNLRHLNLND 358
           R+ NEGA+ +A V  +   L+R+ + +  I   G  +L++A + +       LR L+L  
Sbjct: 104 RISNEGARAVAEVLAQGWDLKRLALRKVNISDDGAVSLAEAIKASAESGTSKLRWLDLGS 163

Query: 359 NTITYKGAIPLGQALSKLPSLAILNL-----GDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           N +  +GA+ +G+AL   P + I  L     G C   S G  ++ K ++ ++TL  ++L 
Sbjct: 164 NDVRSRGAVAIGEALEH-PGVNITRLTLRGNGIC---SEGMDALGKGISMSSTLRRIDLA 219

Query: 414 CNEISVQGGLDLVKAMKNKTK--LKQINVSENQFGEEGVEE-MEKLMKS 459
            N    +G +    A+   T   L+ + +  N  G +G+   M+ LM +
Sbjct: 220 HNGFGDRGAIAFADALSRGTAPNLRVLLLGFNSIGPDGMRALMQALMHT 268



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 16/238 (6%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  +  L L  N     G++ L   +  S    L  + L +NG G  G    + AL    
Sbjct: 182 GVNITRLTLRGNGICSEGMDALGKGI--SMSSTLRRIDLAHNGFGDRGAIAFADAL---- 235

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
                 G+   L+V + G N +  +G + L         +E +++  N I   G  A+++
Sbjct: 236 ----SRGTAPNLRVLLLGFNSIGPDGMRALMQALMH-TDVEHLDVGCNVIGASGAKAIAE 290

Query: 344 AFEENKNLRHLNLNDNTITYKGA----IPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
                + L+ LNL  N I  +G       L +AL K  +L ILNL    L +  A  IA 
Sbjct: 291 MINSTR-LKSLNLACNNIGLRGERSGLTALAKALEKNKTLEILNLRGNALHTNCAQDIAD 349

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            L + T L  +N+  NE+   G  ++ +A++  T L  ++   N+  + G   + K +
Sbjct: 350 VLLEETALIQLNVGYNELYDNGAWEIAEALEENTTLLGLDFQRNEVTDAGASNIAKTL 407



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 5/139 (3%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGA----IPLGQALSKLPS 67
           +EH+++  N I   G  A+++     + L+ LNL  N I  +G       L +AL K  +
Sbjct: 270 VEHLDVGCNVIGASGAKAIAEMINSTR-LKSLNLACNNIGLRGERSGLTALAKALEKNKT 328

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L ILNL    L +  A  IA  L + T L  +N+  NE+   G  ++ +A++  T L  +
Sbjct: 329 LEILNLRGNALHTNCAQDIADVLLEETALIQLNVGYNELYDNGAWEIAEALEENTTLLGL 388

Query: 128 NVSENQFGEEGVEEMEKLM 146
           +   N+  + G   + K +
Sbjct: 389 DFQRNEVTDAGASNIAKTL 407



 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   +K KTLE + +  N ++      ++D   E   L  LN+  N +   GA  + +A
Sbjct: 319 LAKALEKNKTLEILNLRGNALHTNCAQDIADVLLEETALIQLNVGYNELYDNGAWEIAEA 378

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
           L +  +L  L+     +  AGAS+IAK L  N+ +++++L  N IS +G
Sbjct: 379 LEENTTLLGLDFQRNEVTDAGASNIAKTLAVNSIIQEIDLRSNMISSEG 427



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 17/160 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-----KKLRHLNLNDNTITYKGAI 56
           +A V  +   L+ + + +  I   G  +L++A + +      KLR L+L  N +  +GA+
Sbjct: 113 VAEVLAQGWDLKRLALRKVNISDDGAVSLAEAIKASAESGTSKLRWLDLGSNDVRSRGAV 172

Query: 57  PLGQALSKLPSLAILNL-----GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 111
            +G+AL   P + I  L     G C   S G  ++ K ++ ++TL  ++L  N    +G 
Sbjct: 173 AIGEALEH-PGVNITRLTLRGNGIC---SEGMDALGKGISMSSTLRRIDLAHNGFGDRGA 228

Query: 112 LDLVKAMKNKTK--LKQINVSENQFGEEGVEE-MEKLMKS 148
           +    A+   T   L+ + +  N  G +G+   M+ LM +
Sbjct: 229 IAFADALSRGTAPNLRVLLLGFNSIGPDGMRALMQALMHT 268



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 67/165 (40%), Gaps = 34/165 (20%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEEN--KKLRHLNLNDNTITYKGAIPLGQAL------ 62
           TL  +++  NG    G  A +DA        LR L L  N+I   G   L QAL      
Sbjct: 212 TLRRIDLAHNGFGDRGAIAFADALSRGTAPNLRVLLLGFNSIGPDGMRALMQALMHTDVE 271

Query: 63  -----------------------SKLPSL--AILNLGDCLLKSAGASSIAKYLTDNTTLE 97
                                  ++L SL  A  N+G    + +G +++AK L  N TLE
Sbjct: 272 HLDVGCNVIGASGAKAIAEMINSTRLKSLNLACNNIG-LRGERSGLTALAKALEKNKTLE 330

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
            +NL  N +      D+   +  +T L Q+NV  N+  + G  E+
Sbjct: 331 ILNLRGNALHTNCAQDIADVLLEETALIQLNVGYNELYDNGAWEI 375


>gi|338723261|ref|XP_001915323.2| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
           domain-containing protein 2-like [Equus caballus]
          Length = 1013

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 17/229 (7%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG-CKLLSKALHDCYE 284
           R V L L  N+ G +GVE L   L  S C AL    L +N +   G C+L+ +ALH C +
Sbjct: 764 RPVALQLDHNSVGDVGVEQLLPCL--SVCTAL---YLRDNNISDRGICQLIERALH-CEQ 817

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
             K       L +F    N+L +  A  +A +    +    + +  N I   G   L+  
Sbjct: 818 LQK-------LALF---NNKLTDGCAHSMARLLMCKQNFLALRLGNNHITAAGAVVLAQG 867

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              N +L+ L    N +  KGA  L +AL   PSL  L+L    + SAGA ++A  L  N
Sbjct: 868 LRANTSLQFLGFWGNKVGDKGAQALAEALGNHPSLKWLSLVGNSIGSAGAQALAVMLEKN 927

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             LE++ L  N +  +G   L + ++  + LK + +S N     G E +
Sbjct: 928 VALEELCLEENHLQDEGVCSLAEGLQRNSSLKVLKLSNNCITYRGAEAL 976



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 57/123 (46%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G   L+     N  L+ L    N +  KGA  L +AL   PSL  L+L    + 
Sbjct: 854 NHITAAGAVVLAQGLRANTSLQFLGFWGNKVGDKGAQALAEALGNHPSLKWLSLVGNSIG 913

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           SAGA ++A  L  N  LE++ L  N +  +G   L + ++  + LK + +S N     G 
Sbjct: 914 SAGAQALAVMLEKNVALEELCLEENHLQDEGVCSLAEGLQRNSSLKVLKLSNNCITYRGA 973

Query: 140 EEM 142
           E +
Sbjct: 974 EAL 976



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 4/153 (2%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   GI  L +     ++L+ L L +N +T   A  + + L    +   L LG+  + 
Sbjct: 798 NNISDRGICQLIERALHCEQLQKLALFNNKLTDGCAHSMARLLMCKQNFLALRLGNNHIT 857

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           +AGA  +A+ L  NT+L+ +    N++  +G   L +A+ N   LK +++  N  G  G 
Sbjct: 858 AAGAVVLAQGLRANTSLQFLGFWGNKVGDKGAQALAEALGNHPSLKWLSLVGNSIGSAGA 917

Query: 140 EEMEKLMKSFGMAAALVLED----DEGECSDEE 168
           + +  +++       L LE+    DEG CS  E
Sbjct: 918 QALAVMLEKNVALEELCLEENHLQDEGVCSLAE 950



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 62/128 (48%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N I   GI  L +     + L+ L L +N +T   A  + + L    +   L LG+  + 
Sbjct: 798 NNISDRGICQLIERALHCEQLQKLALFNNKLTDGCAHSMARLLMCKQNFLALRLGNNHIT 857

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           +AGA  +A+ L  NT+L+ +    N++  +G   L +A+ N   LK +++  N  G  G 
Sbjct: 858 AAGAVVLAQGLRANTSLQFLGFWGNKVGDKGAQALAEALGNHPSLKWLSLVGNSIGSAGA 917

Query: 451 EEMEKLMK 458
           + +  +++
Sbjct: 918 QALAVMLE 925


>gi|356536033|ref|XP_003536545.1| PREDICTED: RAN GTPase-activating protein 2-like isoform 1 [Glycine
           max]
 gi|356536035|ref|XP_003536546.1| PREDICTED: RAN GTPase-activating protein 2-like isoform 2 [Glycine
           max]
          Length = 533

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 51/283 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S  C  LEEL L N+G+        C+L+    
Sbjct: 211 GSVLRSLNLSDNALGEKGVRAFGALLKSQKC--LEELYLMNDGISKEAARAVCELIPFTE 268

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+  EG   L+        L+
Sbjct: 269 KLKVLHFHNNMTGDEGALAIAEVVKRSPL-LEDFRCSSTRIGAEGGVALSDALGSCAHLK 327

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK-LPSLAIL- 382
           ++++  N +   G  +LS A  ++  LR + L+   +   GAI +  AL +  P L +L 
Sbjct: 328 KLDLRDNMLGVDGGVSLSKALSKHAELREVYLSYLNLEDDGAIAIVDALKESAPHLEVLE 387

Query: 383 ---------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
                                      NL +  LK  GA  I K +  +  L++++L+ N
Sbjct: 388 MSGNDSTADAAPAIAACLEAKQFLSKLNLSENELKDEGAKLITKAIEGHVQLKEIDLSTN 447

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +I   G   L   +  K   K +N++ N   +EG++E++ + K
Sbjct: 448 QIRKDGAQQLAVTVVQKADFKLLNINGNFISDEGIDELKDIFK 490



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 29/170 (17%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K+   LE        I   G  ALSDA      L+ L+L DN +   G + L +A
Sbjct: 288 IAEVVKRSPLLEDFRCSSTRIGAEGGVALSDALGSCAHLKKLDLRDNMLGVDGGVSLSKA 347

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-------------------------- 95
           LSK   L  + L    L+  GA +I   L ++                            
Sbjct: 348 LSKHAELREVYLSYLNLEDDGAIAIVDALKESAPHLEVLEMSGNDSTADAAPAIAACLEA 407

Query: 96  ---LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
              L  +NL+ NE+  +G   + KA++   +LK+I++S NQ  ++G +++
Sbjct: 408 KQFLSKLNLSENELKDEGAKLITKAIEGHVQLKEIDLSTNQIRKDGAQQL 457



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 71/152 (46%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
           FIAGR+ +E      + +   +   L  + +  N +   G+ A     +  K L  L L 
Sbjct: 189 FIAGRSEVEALDVMKIFSTALEGSVLRSLNLSDNALGEKGVRAFGALLKSQKCLEELYLM 248

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
           ++ I+ + A  + + +     L +L+  + +    GA +IA+ +  +  LED   +   I
Sbjct: 249 NDGISKEAARAVCELIPFTEKLKVLHFHNNMTGDEGALAIAEVVKRSPLLEDFRCSSTRI 308

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             +GG+ L  A+ +   LK++++ +N  G +G
Sbjct: 309 GAEGGVALSDALGSCAHLKKLDLRDNMLGVDG 340



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+ DA +E+   L  L ++ N  T   A  +   L     L+ LNL +  LK  GA 
Sbjct: 368 GAIAIVDALKESAPHLEVLEMSGNDSTADAAPAIAACLEAKQFLSKLNLSENELKDEGAK 427

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            I K +  +  L++++L+ N+I   G   L   +  K   K +N++ N   +EG++E++ 
Sbjct: 428 LITKAIEGHVQLKEIDLSTNQIRKDGAQQLAVTVVQKADFKLLNINGNFISDEGIDELKD 487

Query: 145 LMK 147
           + K
Sbjct: 488 IFK 490



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 60/128 (46%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L  + +  N +   G+ A     +  K L  L L ++ I+ + A  + + +     L +
Sbjct: 213 VLRSLNLSDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAARAVCELIPFTEKLKV 272

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA +IA+ +  +  LED   +   I  +GG+ L  A+ +   LK++++ 
Sbjct: 273 LHFHNNMTGDEGALAIAEVVKRSPLLEDFRCSSTRIGAEGGVALSDALGSCAHLKKLDLR 332

Query: 131 ENQFGEEG 138
           +N  G +G
Sbjct: 333 DNMLGVDG 340


>gi|399497858|emb|CCG20257.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+++EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVDSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVDSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVDSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|443728681|gb|ELU14920.1| hypothetical protein CAPTEDRAFT_163530 [Capitella teleta]
          Length = 635

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 12/223 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           ++ L L+DN  G  G   L ++L+ +C   + EL L++N LG++  +  +  L++     
Sbjct: 263 VLRLSLTDNWLGNEGGRHLCEMLKENCY--ITELDLSDNQLGVSFAENFTSVLNN----- 315

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
               S L   V + G N L+++ A  LA        LE + + +N +  V   AL  A  
Sbjct: 316 ---NSTLT-HVTLTG-NFLDDKAAIYLADAIMNTTRLEYLNLSRNKLGEVAGVALGPAIA 370

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
           EN +++HL+L+ N +  KGAI + Q +     +  +NL    + + GA ++   L  N+ 
Sbjct: 371 ENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGNDGAKALGDALKVNSA 430

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           LE++++T N I+ +G + L K +     LK + ++ N     G
Sbjct: 431 LEELDITNNRITTEGSVFLGKGIAVNESLKVLKMARNPMQSAG 473



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 69/137 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             +V     TL HV +  N +       L+DA     +L +LNL+ N +     + LG A
Sbjct: 309 FTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTTRLEYLNLSRNKLGEVAGVALGPA 368

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +++  S+  L+L    L+  GA ++A+ +  N  ++ VNL+ N +   G   L  A+K  
Sbjct: 369 IAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQSVNLSWNGVGNDGAKALGDALKVN 428

Query: 122 TKLKQINVSENQFGEEG 138
           + L++++++ N+   EG
Sbjct: 429 SALEELDITNNRITTEG 445



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 68/137 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA        LE++ + +N +  V   AL  A  EN  ++HL+L+ N +  KGAI + Q 
Sbjct: 337 LADAIMNTTRLEYLNLSRNKLGEVAGVALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQG 396

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +     +  +NL    + + GA ++   L  N+ LE++++T N I+ +G + L K +   
Sbjct: 397 IKHNVLMQSVNLSWNGVGNDGAKALGDALKVNSALEELDITNNRITTEGSVFLGKGIAVN 456

Query: 122 TKLKQINVSENQFGEEG 138
             LK + ++ N     G
Sbjct: 457 ESLKVLKMARNPMQSAG 473



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 128/319 (40%), Gaps = 63/319 (19%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A+ F +     H++M  +G+   G+  ++ A   N  +  L+L DN +  +G   L + L
Sbjct: 226 ASYFLRHMKDSHLKMKHHGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEML 285

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
            +   +  L+L D  L  + A +    L +N+TL  V LT N +  +  + L  A+ N T
Sbjct: 286 KENCYITELDLSDNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTT 345

Query: 123 KLKQINVSENQFGE-EGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           +L+ +N+S N+ GE  GV        + G A A                           
Sbjct: 346 RLEYLNLSRNKLGEVAGV--------ALGPAIA--------------------------- 370

Query: 182 EGDNSNLSHNDSNHSH-NASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
             +NS++ H D + +H              HN   QS            ++LS N  G  
Sbjct: 371 --ENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQS------------VNLSWNGVGND 416

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G + L D L+ +   ALEEL + NN +   G   L K +    ES         LKV   
Sbjct: 417 GAKALGDALKVNS--ALEELDITNNRITTEGSVFLGKGI-AVNES---------LKVLKM 464

Query: 301 GRNRLENEGAKMLAAVFKK 319
            RN +++ G   + A   K
Sbjct: 465 ARNPMQSAGCYAICAAMLK 483



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 14/201 (6%)

Query: 260 LKLNNNGLGITGCKLLSKAL--HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
           LK+ ++GLG  G K ++ AL  + C            L++ +   N L NEG + L  + 
Sbjct: 238 LKMKHHGLGPKGVKPIAVALVSNTC-----------VLRLSLTD-NWLGNEGGRHLCEML 285

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
           K+   +  +++  N +        +     N  L H+ L  N +  K AI L  A+    
Sbjct: 286 KENCYITELDLSDNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTT 345

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
            L  LNL    L      ++   + +N++++ ++L+ N +  +G + + + +K+   ++ 
Sbjct: 346 RLEYLNLSRNKLGEVAGVALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVLMQS 405

Query: 438 INVSENQFGEEGVEEMEKLMK 458
           +N+S N  G +G + +   +K
Sbjct: 406 VNLSWNGVGNDGAKALGDALK 426



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 20/202 (9%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    + ELDLSDN  G    E    +L ++    L  + L  N L       L+ A+ 
Sbjct: 285 LKENCYITELDLSDNQLGVSFAENFTSVLNNNST--LTHVTLTGNFLDDKAAIYLADAIM 342

Query: 281 DCYE------SSKKEG--SPLALKVFIA----------GRNRLENEGAKMLAAVFKKLKT 322
           +         S  K G  + +AL   IA            N L  +GA  +A   K    
Sbjct: 343 NTTRLEYLNLSRNKLGEVAGVALGPAIAENSSIKHLDLSWNHLRRKGAIAVAQGIKHNVL 402

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           ++ V +  NG+ + G  AL DA + N  L  L++ +N IT +G++ LG+ ++   SL +L
Sbjct: 403 MQSVNLSWNGVGNDGAKALGDALKVNSALEELDITNNRITTEGSVFLGKGIAVNESLKVL 462

Query: 383 NLGDCLLKSAGASSIAKYLTDN 404
            +    ++SAG  +I   +  N
Sbjct: 463 KMARNPMQSAGCYAICAAMLKN 484



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%)

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A+ F +      ++M  +G+   G+  ++ A   N  +  L+L DN +  +G   L + L
Sbjct: 226 ASYFLRHMKDSHLKMKHHGLGPKGVKPIAVALVSNTCVLRLSLTDNWLGNEGGRHLCEML 285

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
            +   +  L+L D  L  + A +    L +N+TL  V LT N +  +  + L  A+ N T
Sbjct: 286 KENCYITELDLSDNQLGVSFAENFTSVLNNNSTLTHVTLTGNFLDDKAAIYLADAIMNTT 345

Query: 434 KLKQINVSENQFGE 447
           +L+ +N+S N+ GE
Sbjct: 346 RLEYLNLSRNKLGE 359



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++ V +  NG+ + G  AL DA + N  L  L++ +N IT +G++ LG+ ++   SL +L
Sbjct: 403 MQSVNLSWNGVGNDGAKALGDALKVNSALEELDITNNRITTEGSVFLGKGIAVNESLKVL 462

Query: 72  NLGDCLLKSAGASSIAKYLTDN 93
            +    ++SAG  +I   +  N
Sbjct: 463 KMARNPMQSAGCYAICAAMLKN 484


>gi|303279929|ref|XP_003059257.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459093|gb|EEH56389.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 394

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 22/252 (8%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           GA++  +D+SDNAFG  GV   + +L+      +E +   NNG+          +     
Sbjct: 89  GAKITSVDVSDNAFGEKGVRACSAMLQQQT--GIESISFMNNGI----------SEQAAA 136

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
              +   SP +LK F   +N   +EG   +  + +K   +E  +M  +     G   L+ 
Sbjct: 137 AILELLASPQSLKKFHLHKNMTGDEGTVHIGKLLEKAPHMEDFKMAGSRFTSDGAVTLAK 196

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
                 +L  L+L DN +  +G I L   L K P +  LN     + S G  + A   + 
Sbjct: 197 GLASGTSLTKLDLTDNNVNEEGGIALATMLFKQPKMKHLNFE---MTSLGPDASAAVASA 253

Query: 404 NTT----LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                  LE +NL+  +I+ +G   + KA+     LK + ++EN+ G+ GV ++   +K 
Sbjct: 254 LAAGCPELEYLNLSSCDITPEGVPSVAKAISAMKNLKVLKIAENELGDFGVTQICVALK- 312

Query: 460 FGMAAALVLEDD 471
             M+ A ++E D
Sbjct: 313 --MSGAPIVELD 322



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 34/232 (14%)

Query: 245 LADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR-- 302
           LA LL     F   ++KL+    GI   K++++A  +   + K+    + L   IAGR  
Sbjct: 20  LAPLLAKGAKFT--KVKLSTKSFGIDAAKVVTRAFANIAATLKE----VDLSDIIAGRPE 73

Query: 303 --------------------------NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
                                     N    +G +  +A+ ++   +E +    NGI   
Sbjct: 74  DEALKAMQIITEATLGAKITSVDVSDNAFGEKGVRACSAMLQQQTGIESISFMNNGISEQ 133

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
              A+ +     ++L+  +L+ N    +G + +G+ L K P +    +      S GA +
Sbjct: 134 AAAAILELLASPQSLKKFHLHKNMTGDEGTVHIGKLLEKAPHMEDFKMAGSRFTSDGAVT 193

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           +AK L   T+L  ++LT N ++ +GG+ L   +  + K+K +N      G +
Sbjct: 194 LAKGLASGTSLTKLDLTDNNVNEEGGIALATMLFKQPKMKHLNFEMTSLGPD 245



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 64/135 (47%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           +A+ ++   +E +    NGI      A+ +     + L+  +L+ N    +G + +G+ L
Sbjct: 111 SAMLQQQTGIESISFMNNGISEQAAAAILELLASPQSLKKFHLHKNMTGDEGTVHIGKLL 170

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
            K P +    +      S GA ++AK L   T+L  ++LT N ++ +GG+ L   +  + 
Sbjct: 171 EKAPHMEDFKMAGSRFTSDGAVTLAKGLASGTSLTKLDLTDNNVNEEGGIALATMLFKQP 230

Query: 123 KLKQINVSENQFGEE 137
           K+K +N      G +
Sbjct: 231 KMKHLNFEMTSLGPD 245



 Score = 45.1 bits (105), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 75/135 (55%), Gaps = 2/135 (1%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLE 97
           +L +LNL+   IT +G   + +A+S + +L +L + +  L   G + I   L      + 
Sbjct: 260 ELEYLNLSSCDITPEGVPSVAKAISAMKNLKVLKIAENELGDFGVTQICVALKMSGAPIV 319

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV- 156
           +++++ NE+ + G +   +    K     +N+  N   +EGVEE++ +++  G++AAL+ 
Sbjct: 320 ELDVSTNELVLAGAVAAARLAAAKVGFTALNLDANYISDEGVEEVKSVLEGAGISAALMS 379

Query: 157 LEDDEGECSDEEQDE 171
           +E+++ + +DE  D+
Sbjct: 380 MEENDADMADEVDDD 394


>gi|157871015|ref|XP_001684057.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68127125|emb|CAJ04759.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 429

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L  LDLS N  GP G E LA +LR+S   AL  L+L+ N LG TG      A+
Sbjct: 133 ALERNTYLSSLDLSVNELGPSGAEWLAGILRNSV-LALRVLQLHGNYLGPTGVM----AI 187

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            D  +++K+      L+    G N   +E A  +AA+ +   TLE +++  N +   G+ 
Sbjct: 188 CDAVKTNKE------LRRLTLGNNHATDEAAGAVAAMLEANDTLEELDICLNTLTANGVR 241

Query: 340 ALS-DAFEENKNLRHLNLNDNTITYKGAIPLGQALS--KLPSLAILNLGDCLLKSAGASS 396
            ++     +N +L  L+L+ N +   GA  L Q L+  +   L  L+L  C L ++G + 
Sbjct: 242 TIARQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLKQLDLSSCGLTASGGAR 301

Query: 397 IAKYL----------------------------TDNTTLEDVNLTCNEISVQGGLDLVKA 428
           +A  L                            TD  T+  V+++CN+I  +G   L+ A
Sbjct: 302 VASLLSTSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQLIDA 361

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
                +L  +  + N       + ++ L++
Sbjct: 362 AVRNAQLVALVTNGNNISRVAQKRLDNLLE 391



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 23/250 (9%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH--------- 280
           +DL DN  GP G   +A  L SS    + E+ +  N +G  GC  L+  ++         
Sbjct: 32  IDLMDNQLGPTGAVKIASCLESS---PVTEVFICYNDIGKEGCDGLAGVVNLSHSLQVLD 88

Query: 281 ---------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
                    D +   +      ALK      NRL  EGA + A   ++   L  +++  N
Sbjct: 89  IRGNQLSASDVHRLLRSVSMSTALKRLGLASNRLGPEGAALTAKALERNTYLSSLDLSVN 148

Query: 332 GIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
            +   G   L+     +   LR L L+ N +   G + +  A+     L  L LG+    
Sbjct: 149 ELGPSGAEWLAGILRNSVLALRVLQLHGNYLGPTGVMAICDAVKTNKELRRLTLGNNHAT 208

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK-AMKNKTKLKQINVSENQFGEEG 449
              A ++A  L  N TLE++++  N ++  G   + +  +   T L  +++S N+ G  G
Sbjct: 209 DEAAGAVAAMLEANDTLEELDICLNTLTANGVRTIARQGLAKNTSLAVLSLSGNEVGPVG 268

Query: 450 VEEMEKLMKS 459
             E+ +++ S
Sbjct: 269 ANELTQVLTS 278



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 140/346 (40%), Gaps = 33/346 (9%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G   L+     +  L+ L++  N ++      L +++S   +L  L L    L 
Sbjct: 64  NDIGKEGCDGLAGVVNLSHSLQVLDIRGNQLSASDVHRLLRSVSMSTALKRLGLASNRLG 123

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEG 138
             GA+  AK L  NT L  ++L+ NE+   G   L   ++N    L+ + +  N  G  G
Sbjct: 124 PEGAALTAKALERNTYLSSLDLSVNELGPSGAEWLAGILRNSVLALRVLQLHGNYLGPTG 183

Query: 139 VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESE--EENDSDAEGDNSNLSHNDSNHS 196
           V  +   +K+      L L ++    +DE     +   E ND+  E D   L+   +N  
Sbjct: 184 VMAICDAVKTNKELRRLTLGNNHA--TDEAAGAVAAMLEANDTLEELDIC-LNTLTANGV 240

Query: 197 HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
              + Q       + NTS            L  L LS N  GP+G   L  +L S     
Sbjct: 241 RTIARQG-----LAKNTS------------LAVLSLSGNEVGPVGANELTQVLTSHQRSV 283

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L++L L++ GL  +G   ++  L           + ++LK      N L++E A  LA  
Sbjct: 284 LKQLDLSSCGLTASGGARVASLLS----------TSMSLKEINLSDNALDDEAAVRLAQN 333

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
                T+  V++  N I   G + L DA   N  L  L  N N I+
Sbjct: 334 ITDGITISVVDVSCNKIGEEGASQLIDAAVRNAQLVALVTNGNNIS 379



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 2/144 (1%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK--LRHLNLNDNTITYKGAIPLGQALS 63
             K  +L  + +  N +  VG   L+     +++  L+ L+L+   +T  G   +   LS
Sbjct: 248 LAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLKQLDLSSCGLTASGGARVASLLS 307

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
              SL  +NL D  L    A  +A+ +TD  T+  V+++CN+I  +G   L+ A     +
Sbjct: 308 TSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQLIDAAVRNAQ 367

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L  +  + N       + ++ L++
Sbjct: 368 LVALVTNGNNISRVAQKRLDNLLE 391


>gi|356498020|ref|XP_003517853.1| PREDICTED: protein NLRC3-like [Glycine max]
          Length = 606

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 179/445 (40%), Gaps = 72/445 (16%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E V    NGI   G+ A     + N  L+ L+L+ N +  +GA  L   L    S+  L 
Sbjct: 202 EEVSFAANGITAAGLRAFDGVLQSNITLKTLDLSGNLVGDEGAKCLCDILVNNSSIEKLQ 261

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    L   GA +IA+ L  N++L  + L  N I   G   L  A+     ++ I+++ N
Sbjct: 262 LNSADLGDVGAKAIAEMLKKNSSLRVLELNNNMIEYSGFSSLAGALLENNSIRNIHLNGN 321

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLE----DDEGECSDEEQDEESEEENDSDAEGDNSNL 188
             G  G   + K ++S      L L      DEG CS                      L
Sbjct: 322 YGGALGANALAKALESNKSIRELHLHGNSIGDEGICS----------------------L 359

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
               S+H                              +L  LD+ +N+    G   +A+ 
Sbjct: 360 MTGLSSHK----------------------------GKLTLLDIGNNSLTAKGSFHVAEY 391

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           +R S    L  L L  N +G  G + ++ AL +      +  S L L     G N +  +
Sbjct: 392 IRKSR--NLLWLNLYMNDIGDEGAEKIAVALKE-----NRSISTLDL-----GGNNIHVD 439

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           G   +A V K    +  +E+  N I   G  AL++  + + N++ L L    I  KGA  
Sbjct: 440 GVNAIAQVLKDNLVITTLELSYNPIGPDGAKALAEVLKFHGNIKTLKLGWCQIGAKGAEC 499

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVK 427
           +  AL    +++IL+L    L+  GA S+A+ L   N  L  ++L  NEI   G   + +
Sbjct: 500 IADALKYNTTISILDLRANGLRDEGAQSLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQ 559

Query: 428 AMK--NKTKLKQINVSEN---QFGE 447
           A+K  +   +  +N++ N   +FG+
Sbjct: 560 ALKSNDDVAVTSLNIASNFLTKFGQ 584



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 47/275 (17%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS+++LKT      LDLS N  G  G + L D+L ++   ++E+L+LN+  LG  G K +
Sbjct: 224 QSNITLKT------LDLSGNLVGDEGAKCLCDILVNNS--SIEKLQLNSADLGDVGAKAI 275

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           ++ L       KK  S   L+V     N +E  G   LA    +  ++  + +  N    
Sbjct: 276 AEML-------KKNSS---LRVLELNNNMIEYSGFSSLAGALLENNSIRNIHLNGNYGGA 325

Query: 336 VGITALSDAFEENKNLRHLNLN-----------------------------DNTITYKGA 366
           +G  AL+ A E NK++R L+L+                             +N++T KG+
Sbjct: 326 LGANALAKALESNKSIRELHLHGNSIGDEGICSLMTGLSSHKGKLTLLDIGNNSLTAKGS 385

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + + + K  +L  LNL    +   GA  IA  L +N ++  ++L  N I V G   + 
Sbjct: 386 FHVAEYIRKSRNLLWLNLYMNDIGDEGAEKIAVALKENRSISTLDLGGNNIHVDGVNAIA 445

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           + +K+   +  + +S N  G +G + + +++K  G
Sbjct: 446 QVLKDNLVITTLELSYNPIGPDGAKALAEVLKFHG 480



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 173/386 (44%), Gaps = 37/386 (9%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           + +AG  +    L  N TL+ ++L+ N +  +G   L   + N + ++++ ++    G+ 
Sbjct: 211 ITAAGLRAFDGVLQSNITLKTLDLSGNLVGDEGAKCLCDILVNNSSIEKLQLNSADLGDV 270

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G + + +++K       L L ++  E S       +  EN                    
Sbjct: 271 GAKAIAEMLKKNSSLRVLELNNNMIEYSGFSSLAGALLEN-------------------- 310

Query: 198 NASNQSHNNSNQSHNT-SNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR--SSCC 254
           N+    H N N      +N    +L++   + EL L  N+   IG EG+  L+   SS  
Sbjct: 311 NSIRNIHLNGNYGGALGANALAKALESNKSIRELHLHGNS---IGDEGICSLMTGLSSHK 367

Query: 255 FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA 314
             L  L + NN L   G      + H   E  +K  + L L +++   N + +EGA+ +A
Sbjct: 368 GKLTLLDIGNNSLTAKG------SFH-VAEYIRKSRNLLWLNLYM---NDIGDEGAEKIA 417

Query: 315 AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
              K+ +++  +++  N I+  G+ A++   ++N  +  L L+ N I   GA  L + L 
Sbjct: 418 VALKENRSISTLDLGGNNIHVDGVNAIAQVLKDNLVITTLELSYNPIGPDGAKALAEVLK 477

Query: 375 KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 434
              ++  L LG C + + GA  IA  L  NTT+  ++L  N +  +G   L +++K   +
Sbjct: 478 FHGNIKTLKLGWCQIGAKGAECIADALKYNTTISILDLRANGLRDEGAQSLARSLKVVNE 537

Query: 435 -LKQINVSENQFGEEGVEEMEKLMKS 459
            L  +++  N+  ++G   + + +KS
Sbjct: 538 ALTSLDLGFNEIRDDGAFAIAQALKS 563



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 174/398 (43%), Gaps = 47/398 (11%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +++  N +   G   L D    N  +  L LN   +   GA  + + L K  SL +
Sbjct: 228 TLKTLDLSGNLVGDEGAKCLCDILVNNSSIEKLQLNSADLGDVGAKAIAEMLKKNSSLRV 287

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L + +++ +G SS+A  L +N ++ +++L  N     G   L KA+++   ++++++ 
Sbjct: 288 LELNNNMIEYSGFSSLAGALLENNSIRNIHLNGNYGGALGANALAKALESNKSIRELHLH 347

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N  G+EG+  +   + S      L L D                       G+NS L+ 
Sbjct: 348 GNSIGDEGICSLMTGLSSH--KGKLTLLDI----------------------GNNS-LTA 382

Query: 191 NDSNHSHNASNQSHN-------NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
             S H      +S N        ++     + +  ++LK    +  LDL  N     GV 
Sbjct: 383 KGSFHVAEYIRKSRNLLWLNLYMNDIGDEGAEKIAVALKENRSISTLDLGGNNIHVDGVN 442

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
            +A +L+ +    +  L+L+ N +G  G K L++ L       K  G+   LK+   G  
Sbjct: 443 AIAQVLKDN--LVITTLELSYNPIGPDGAKALAEVL-------KFHGNIKTLKL---GWC 490

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE-ENKNLRHLNLNDNTIT 362
           ++  +GA+ +A   K   T+  +++  NG+   G  +L+ + +  N+ L  L+L  N I 
Sbjct: 491 QIGAKGAECIADALKYNTTISILDLRANGLRDEGAQSLARSLKVVNEALTSLDLGFNEIR 550

Query: 363 YKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIA 398
             GA  + QAL     +A+  LN+    L   G  ++A
Sbjct: 551 DDGAFAIAQALKSNDDVAVTSLNIASNFLTKFGQGALA 588



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 21/241 (8%)

Query: 216 QSHMSLKTGAR----LVELDLSDNAFGPIGVEGLADLLRSSCCF--ALEELKLNNNGLGI 269
           QS   L   AR       +D+S   FG  G+  LA+    S  F    EE+    NG+  
Sbjct: 158 QSRQKLNEFARELRSFPSIDMSGRNFGDEGLFFLAE----SLAFNQIAEEVSFAANGITA 213

Query: 270 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
            G +     L           S + LK      N + +EGAK L  +     ++E++++ 
Sbjct: 214 AGLRAFDGVLQ----------SNITLKTLDLSGNLVGDEGAKCLCDILVNNSSIEKLQLN 263

Query: 330 QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 389
              +  VG  A+++  ++N +LR L LN+N I Y G   L  AL +  S+  ++L     
Sbjct: 264 SADLGDVGAKAIAEMLKKNSSLRVLELNNNMIEYSGFSSLAGALLENNSIRNIHLNGNYG 323

Query: 390 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEE 448
            + GA+++AK L  N ++ +++L  N I  +G   L+  + + K KL  +++  N    +
Sbjct: 324 GALGANALAKALESNKSIRELHLHGNSIGDEGICSLMTGLSSHKGKLTLLDIGNNSLTAK 383

Query: 449 G 449
           G
Sbjct: 384 G 384



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ +++  +++  N I+  G+ A++   ++N  +  L L+ N I   GA  L + 
Sbjct: 416 IAVALKENRSISTLDLGGNNIHVDGVNAIAQVLKDNLVITTLELSYNPIGPDGAKALAEV 475

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L LG C + + GA  IA  L  NTT+  ++L  N +  +G   L +++K  
Sbjct: 476 LKFHGNIKTLKLGWCQIGAKGAECIADALKYNTTISILDLRANGLRDEGAQSLARSLKVV 535

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKS 148
            + L  +++  N+  ++G   + + +KS
Sbjct: 536 NEALTSLDLGFNEIRDDGAFAIAQALKS 563



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 63/375 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + KK  +L  +E+  N I + G ++L+ A  EN  +R+++LN N     GA  L +A
Sbjct: 275 IAEMLKKNSSLRVLELNNNMIEYSGFSSLAGALLENNSIRNIHLNGNYGGALGANALAKA 334

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    S+  L+L    +   G  S+   L+ +   L  +++  N ++ +G   + + ++ 
Sbjct: 335 LESNKSIRELHLHGNSIGDEGICSLMTGLSSHKGKLTLLDIGNNSLTAKGSFHVAEYIRK 394

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
              L  +N+  N  G+EG E++   +K                        E+   +  D
Sbjct: 395 SRNLLWLNLYMNDIGDEGAEKIAVALK------------------------ENRSISTLD 430

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
             G+N    H D                      N     LK    +  L+LS N  GP 
Sbjct: 431 LGGNN---IHVDG--------------------VNAIAQVLKDNLVITTLELSYNPIGPD 467

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G + LA++L+      ++ LKL    +G  G + ++ AL   Y ++    S L L+    
Sbjct: 468 GAKALAEVLKFHG--NIKTLKLGWCQIGAKGAECIADALK--YNTTI---SILDLRA--- 517

Query: 301 GRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--LRHLNLN 357
             N L +EGA+ LA   K + + L  +++  N I   G  A++ A + N +  +  LN+ 
Sbjct: 518 --NGLRDEGAQSLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNDDVAVTSLNIA 575

Query: 358 DNTITYKGAIPLGQA 372
            N +T  G   L  A
Sbjct: 576 SNFLTKFGQGALADA 590


>gi|218675766|gb|AAI69297.2| NOD3 protein [synthetic construct]
          Length = 311

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 14/231 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC-FALEELKLNNNGLGITGCKLLSKA 278
           +LK    L  LDL  N+    GV   A L+ + C    L  L L  N +   G + ++ A
Sbjct: 47  ALKVNQGLESLDLQSNSISDAGV---AALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 103

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L  C  S+        LK      N L ++GA+ +A   ++ +TL  + +  N I     
Sbjct: 104 L--CANST--------LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAA 153

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            AL  A + N++L  L+L +N I   GA  + +AL    +L  L L    + ++GA  + 
Sbjct: 154 QALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLG 213

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           + L  N TLE ++L  N I V G   L  A+K  + L+++N+ EN  G +G
Sbjct: 214 EALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDG 264



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 40/240 (16%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L L  N+ GP+G + +AD L+ +   +L+EL  ++N +G  G K L++            
Sbjct: 1   LHLQKNSIGPMGAQRMADALKQN--RSLKELMFSSNSIGDGGAKALAE------------ 46

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
               ALKV         N+G             LE +++  N I   G+ AL  A   N+
Sbjct: 47  ----ALKV---------NQG-------------LESLDLQSNSISDAGVAALMGALCTNQ 80

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L  L+L +N+I+ +GA  +  AL    +L  L+L   LL   GA +IA  + +N TL  
Sbjct: 81  TLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTS 140

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           ++L  N I       L +A++    L  +++ EN  G++G   + + +K      AL L+
Sbjct: 141 LHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 200



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++L  +++ +N I   G  A++ A + N  L  L L   +I   GA  LG+AL+   +L 
Sbjct: 164 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 223

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           IL+L    +  AGA ++A  L  N++L  +NL  N + + G + +  A+    +L+ IN+
Sbjct: 224 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 283

Query: 130 SENQFGEEGVEEMEKLMKS 148
             N  G+ G   + + +K+
Sbjct: 284 QGNHIGDSGARMISEAIKT 302



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 44  LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 103

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I       L +A++  
Sbjct: 104 LCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 163

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G++G   + + +K      AL L+
Sbjct: 164 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQ 200



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   ++ +TL  + +  N I      AL  A + N+ L  L+L +N I   GA  + +A
Sbjct: 128 IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 187

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    + ++GA  + + L  N TLE ++L  N I V G   L  A+K  
Sbjct: 188 LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 247

Query: 122 TKLKQINVSENQFGEEG 138
           + L+++N+ EN  G +G
Sbjct: 248 SSLRRLNLQENSLGMDG 264



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ +    N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 16  MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 75

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 76  LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVREN 135

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 136 RTLTSLHLQWN 146



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/359 (21%), Positives = 139/359 (38%), Gaps = 59/359 (16%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           + + +N I  +G   ++DA ++N+ L+ L  + N+I   GA  L +AL     L  L+L 
Sbjct: 1   LHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQ 60

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              +  AG +++   L  N TL  ++L  N IS +G   +  A+   + LK ++++ N  
Sbjct: 61  SNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLL 120

Query: 135 GEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSN 194
            ++G   +   ++      +L L+ +  +    +   ++ + N S    D    +  D  
Sbjct: 121 HDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDG 180

Query: 195 HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
               A                    +LK    L  L L   + G  G + L + L  +  
Sbjct: 181 ACAVAR-------------------ALKVNTALTALYLQVASIGASGAQVLGEAL--AVN 219

Query: 255 FALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA 314
             LE L L  N +G+ G K L+ AL                                   
Sbjct: 220 RTLEILDLRGNAIGVAGAKALANAL----------------------------------- 244

Query: 315 AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
              K   +L R+ + +N +   G   ++ A   N  L+H+NL  N I   GA  + +A+
Sbjct: 245 ---KVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAI 300



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 10/149 (6%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           +L  L L  N +G  G   +++AL       K   +  AL + +A    +   GA++L  
Sbjct: 165 SLTSLDLQENAIGDDGACAVARAL-------KVNTALTALYLQVAS---IGASGAQVLGE 214

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
                +TLE +++  N I   G  AL++A + N +LR LNL +N++   GAI +  ALS 
Sbjct: 215 ALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSG 274

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              L  +NL    +  +GA  I++ +  N
Sbjct: 275 NHRLQHINLQGNHIGDSGARMISEAIKTN 303



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TLE +++  N I   G  AL++A + N  LR LNL +N++   GAI +  ALS    L 
Sbjct: 220 RTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQ 279

Query: 70  ILNLGDCLLKSAGASSIAKYLTDN 93
            +NL    +  +GA  I++ +  N
Sbjct: 280 HINLQGNHIGDSGARMISEAIKTN 303


>gi|380763687|gb|AFE61355.1| nucleotide binding and oligomerization domain 1 protein [Labeo
           rohita]
          Length = 937

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 10/192 (5%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           ++ L L  N +   G KL++K + +C            LK+   G N +   G K LA+ 
Sbjct: 742 IKVLGLYKNSITDVGAKLVAKIIEECPH----------LKIVKLGCNNITGVGGKYLASA 791

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
             K K++  + M  N I   G  A ++A + + +L +L+L+ N IT  G   L +AL + 
Sbjct: 792 ICKSKSIFDIGMWGNSIGDEGADAFAEALKNHPSLTNLSLSANGITSHGGRSLAKALKEN 851

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            SL I  L    +    AS  A     N+ L  + L  NE ++ G   + + + N T LK
Sbjct: 852 TSLHIFWLIQNKISDDAASDFADTFRSNSALTHLMLIENEFTISGAKQMSEGLTNNTTLK 911

Query: 437 QINVSENQFGEE 448
           ++NV  N+  EE
Sbjct: 912 EVNVKGNRVSEE 923



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           +KV    +N + + GAK++A + ++   L+ V++  N I  VG   L+ A  ++K++  +
Sbjct: 742 IKVLGLYKNSITDVGAKLVAKIIEECPHLKIVKLGCNNITGVGGKYLASAICKSKSIFDI 801

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            +  N+I  +GA    +AL   PSL  L+L    + S G  S+AK L +NT+L    L  
Sbjct: 802 GMWGNSIGDEGADAFAEALKNHPSLTNLSLSANGITSHGGRSLAKALKENTSLHIFWLIQ 861

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           N+IS     D     ++ + L  + + EN+F   G ++M
Sbjct: 862 NKISDDAASDFADTFRSNSALTHLMLIENEFTISGAKQM 900



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 66/136 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+   K K++  + M  N I   G  A ++A + +  L +L+L+ N IT  G   L +A
Sbjct: 788 LASAICKSKSIFDIGMWGNSIGDEGADAFAEALKNHPSLTNLSLSANGITSHGGRSLAKA 847

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL I  L    +    AS  A     N+ L  + L  NE ++ G   + + + N 
Sbjct: 848 LKENTSLHIFWLIQNKISDDAASDFADTFRSNSALTHLMLIENEFTISGAKQMSEGLTNN 907

Query: 122 TKLKQINVSENQFGEE 137
           T LK++NV  N+  EE
Sbjct: 908 TTLKEVNVKGNRVSEE 923



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 83/170 (48%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N+L +   ++LA    + K ++ + + +N I  VG   ++   EE  +L+ + L  N IT
Sbjct: 722 NQLTDSSIEVLAEELTRHKIIKVLGLYKNSITDVGAKLVAKIIEECPHLKIVKLGCNNIT 781

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   L  A+ K  S+  + +    +   GA + A+ L ++ +L +++L+ N I+  GG
Sbjct: 782 GVGGKYLASAICKSKSIFDIGMWGNSIGDEGADAFAEALKNHPSLTNLSLSANGITSHGG 841

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
             L KA+K  T L    + +N+  ++   +     +S      L+L ++E
Sbjct: 842 RSLAKALKENTSLHIFWLIQNKISDDAASDFADTFRSNSALTHLMLIENE 891



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 81/172 (47%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA    + K ++ + + +N I  VG   ++   EE   L+ + L  N IT  G   L  
Sbjct: 731 VLAEELTRHKIIKVLGLYKNSITDVGAKLVAKIIEECPHLKIVKLGCNNITGVGGKYLAS 790

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A+ K  S+  + +    +   GA + A+ L ++ +L +++L+ N I+  GG  L KA+K 
Sbjct: 791 AICKSKSIFDIGMWGNSIGDEGADAFAEALKNHPSLTNLSLSANGITSHGGRSLAKALKE 850

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
            T L    + +N+  ++   +     +S      L+L ++E   S  +Q  E
Sbjct: 851 NTSLHIFWLIQNKISDDAASDFADTFRSNSALTHLMLIENEFTISGAKQMSE 902



 Score = 41.6 bits (96), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 7/135 (5%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHL--NLNDNTITYKGAIPLGQALSKLPSLAILN 72
           V+M  N I   G+  L  +F +   +R     L D++I       L + L++   + +L 
Sbjct: 692 VDMDNNNINDYGVKQLRPSFSKMTVVRFCVNQLTDSSIEV-----LAEELTRHKIIKVLG 746

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    +   GA  +AK + +   L+ V L CN I+  GG  L  A+     +  I +  N
Sbjct: 747 LYKNSITDVGAKLVAKIIEECPHLKIVKLGCNNITGVGGKYLASAICKSKSIFDIGMWGN 806

Query: 133 QFGEEGVEEMEKLMK 147
             G+EG +   + +K
Sbjct: 807 SIGDEGADAFAEALK 821


>gi|443709732|gb|ELU04281.1| hypothetical protein CAPTEDRAFT_194577 [Capitella teleta]
          Length = 569

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 21/252 (8%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
            + L+LSD +  P G   L   + +     L +L ++NN LG  G K + + L       
Sbjct: 166 FLNLNLSDASLTPEGTRILVSAIGAHS--TLTDLDISNNALGSLGAKYICEFL------- 216

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
               +   +++ ++G N      A + A   KK +TL+ +++  N     G   L+    
Sbjct: 217 --TSNSTLMRLILSG-NGFGERDAILFAKALKKNRTLKILDLSHNEFREKGGLHLAMLIA 273

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALS---------KLPSLAILNLGDCLLKSAGASSI 397
            N++L  L+L  N +  KG+  +  AL          +  SL  L+L      + GA  +
Sbjct: 274 YNRSLLRLSLAWNHLRLKGSATIANALKCTYEVLHNKENVSLVSLDLSWNGFANEGAKVL 333

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           A  L  N TL+++NLT N I ++GG  L + +   T+LK + VS N     GV  + K +
Sbjct: 334 AHSLVRNKTLQELNLTSNRIEMEGGFALARGIARNTQLKILRVSRNPITITGVCFLLKTL 393

Query: 458 KSFGMAAALVLE 469
           K    ++  V+E
Sbjct: 394 KESAFSSLEVIE 405



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 9/167 (5%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           + A   KK +TL+ +++  N     G   L+     N+ L  L+L  N +  KG+  +  
Sbjct: 239 LFAKALKKNRTLKILDLSHNEFREKGGLHLAMLIAYNRSLLRLSLAWNHLRLKGSATIAN 298

Query: 61  ALS---------KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 111
           AL          +  SL  L+L      + GA  +A  L  N TL+++NLT N I ++GG
Sbjct: 299 ALKCTYEVLHNKENVSLVSLDLSWNGFANEGAKVLAHSLVRNKTLQELNLTSNRIEMEGG 358

Query: 112 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L + +   T+LK + VS N     GV  + K +K    ++  V+E
Sbjct: 359 FALARGIARNTQLKILRVSRNPITITGVCFLLKTLKESAFSSLEVIE 405



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 23/157 (14%)

Query: 309 GAKMLAAVFKKLKTLE------RVEMPQNGIYHVGITALSDAFEENKNLR---------- 352
           GAK    V  +LKT E        ++PQ       + AL  +FE + +L           
Sbjct: 115 GAKAYPHVASRLKTAEVNLSHQHFDIPQ-------LKALCVSFEVSDSLSSSQKCHDSFL 167

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
           +LNL+D ++T +G   L  A+    +L  L++ +  L S GA  I ++LT N+TL  + L
Sbjct: 168 NLNLSDASLTPEGTRILVSAIGAHSTLTDLDISNNALGSLGAKYICEFLTSNSTLMRLIL 227

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           + N    +  +   KA+K    LK +++S N+F E+G
Sbjct: 228 SGNGFGERDAILFAKALKKNRTLKILDLSHNEFREKG 264



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 11/144 (7%)

Query: 5   VFKKLKTLE------HVEMPQNGIYHVGITALSDAFEENKK----LRHLNLNDNTITYKG 54
           V  +LKT E      H ++PQ     V    +SD+   ++K      +LNL+D ++T +G
Sbjct: 122 VASRLKTAEVNLSHQHFDIPQLKALCVSF-EVSDSLSSSQKCHDSFLNLNLSDASLTPEG 180

Query: 55  AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
              L  A+    +L  L++ +  L S GA  I ++LT N+TL  + L+ N    +  +  
Sbjct: 181 TRILVSAIGAHSTLTDLDISNNALGSLGAKYICEFLTSNSTLMRLILSGNGFGERDAILF 240

Query: 115 VKAMKNKTKLKQINVSENQFGEEG 138
            KA+K    LK +++S N+F E+G
Sbjct: 241 AKALKKNRTLKILDLSHNEFREKG 264


>gi|428177965|gb|EKX46842.1| hypothetical protein GUITHDRAFT_59521, partial [Guillardia theta
           CCMP2712]
          Length = 255

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 12/226 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDLS N+    G   L+ +L ++    LE L + +NG+   G   L+  L   + SS   
Sbjct: 30  LDLSSNSISDQGASALSAVLIANS--TLESLDIASNGISQHGVACLAAGLK--HNSS--- 82

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
                LK      N   + G   LA   ++  +L+ + +  NGI   G +ALS A   +K
Sbjct: 83  -----LKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACLMSK 137

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L  + L+ N I   GA  L   L + P+L +L L    +   GA S+A+ L  N+ L+ 
Sbjct: 138 CLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSNLKV 197

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           + L CNEI+  G   L + + +   L+ + + EN  GE G   + K
Sbjct: 198 IGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLAK 243



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 12/176 (6%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N +   G   LAA  K   +L+ +E+  NG    G+  L+DA + N +L++L L  N I 
Sbjct: 63  NGISQHGVACLAAGLKHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGIL 122

Query: 363 YKGAIPLGQA------LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             GA  L QA      L+K+  L+   +GDC     GA  ++  L  N  L+ + L CN 
Sbjct: 123 ESGASALSQACLMSKCLTKIE-LSYNAIGDC-----GAEILSGMLERNPALKVLGLVCNG 176

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           I+ +G   L +A+++ + LK I ++ N+  ++G   + +++        L LE+++
Sbjct: 177 ITDKGAKSLARALESNSNLKVIGLACNEITDDGAASLAEMLNHNDSLQGLYLEEND 232



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA  K   +L+ +E+  NG    G+  L+DA + N  L++L L  N I   GA  L QA
Sbjct: 73  LAAGLKHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQA 132

Query: 62  ------LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
                 L+K+  L+   +GDC     GA  ++  L  N  L+ + L CN I+ +G   L 
Sbjct: 133 CLMSKCLTKIE-LSYNAIGDC-----GAEILSGMLERNPALKVLGLVCNGITDKGAKSLA 186

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED-DEGE 163
           +A+++ + LK I ++ N+  ++G   + +++        L LE+ D GE
Sbjct: 187 RALESNSNLKVIGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGE 235



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            LA   ++  +L+++ +  NGI   G +ALS A   +K L  + L+ N I   GA  L  
Sbjct: 100 FLADAVQRNSSLQYLGLGFNGILESGASALSQACLMSKCLTKIELSYNAIGDCGAEILSG 159

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L + P+L +L L    +   GA S+A+ L  N+ L+ + L CNEI+  G   L + + +
Sbjct: 160 MLERNPALKVLGLVCNGITDKGAKSLARALESNSNLKVIGLACNEITDDGAASLAEMLNH 219

Query: 121 KTKLKQINVSENQFGEEGVEEMEK 144
              L+ + + EN  GE G   + K
Sbjct: 220 NDSLQGLYLEENDIGEVGSALLAK 243



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 12/213 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  LD++ N     GV  LA  L+ +   +L+ L+L+ NG G +G   L+ A+       
Sbjct: 55  LESLDIASNGISQHGVACLAAGLKHNS--SLKSLELSFNGFGDSGVVFLADAV------- 105

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           ++  S   L+    G N +   GA  L+      K L ++E+  N I   G   LS   E
Sbjct: 106 QRNSS---LQYLGLGFNGILESGASALSQACLMSKCLTKIELSYNAIGDCGAEILSGMLE 162

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N  L+ L L  N IT KGA  L +AL    +L ++ L    +   GA+S+A+ L  N +
Sbjct: 163 RNPALKVLGLVCNGITDKGAKSLARALESNSNLKVIGLACNEITDDGAASLAEMLNHNDS 222

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
           L+ + L  N+I   G   L KA +  T    +N
Sbjct: 223 LQGLYLEENDIGEVGSALLAKAHRTTTVCTPMN 255



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 57/119 (47%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K L  +E+  N I   G   LS   E N  L+ L L  N IT KGA  L +AL    +L 
Sbjct: 137 KCLTKIELSYNAIGDCGAEILSGMLERNPALKVLGLVCNGITDKGAKSLARALESNSNLK 196

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
           ++ L    +   GA+S+A+ L  N +L+ + L  N+I   G   L KA +  T    +N
Sbjct: 197 VIGLACNEITDDGAASLAEMLNHNDSLQGLYLEENDIGEVGSALLAKAHRTTTVCTPMN 255



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L L DN IT   ++ L + +    +L +L+L    +   GAS+++  L  N+TLE +++ 
Sbjct: 2   LFLGDNDITPLLSVALAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIA 61

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            N IS  G   L   +K+ + LK + +S N FG+ GV
Sbjct: 62  SNGISQHGVACLAAGLKHNSSLKSLELSFNGFGDSGV 98



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 64/146 (43%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   +  KTL+ +++  N I   G +ALS     N  L  L++  N I+  G   L   
Sbjct: 17  LAREIRYNKTLKLLDLSSNSISDQGASALSAVLIANSTLESLDIASNGISQHGVACLAAG 76

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL  L L       +G   +A  +  N++L+ + L  N I   G   L +A    
Sbjct: 77  LKHNSSLKSLELSFNGFGDSGVVFLADAVQRNSSLQYLGLGFNGILESGASALSQACLMS 136

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L +I +S N  G+ G E +  +++
Sbjct: 137 KCLTKIELSYNAIGDCGAEILSGMLE 162


>gi|219518789|gb|AAI43360.1| NLRP3 protein [Homo sapiens]
          Length = 1016

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 125/291 (42%), Gaps = 31/291 (10%)

Query: 196  SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL------ 249
            SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L      
Sbjct: 712  SHAACSHGLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPGCN 771

Query: 250  -RSSCCFALEELKLNNNGLGITGCKLLSKALHD-------------------CYESSKKE 289
             R  C   L EL L++N LG  G +LL   L                     C + +   
Sbjct: 772  IRRLCNQKLVELDLSDNALGDFGIRLLCVGLKHLLCNLKKLWLVSCCLTSACCQDLASVL 831

Query: 290  GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEEN 348
             +  +L     G N L + G  +L    K  +  L+++ +  +G+  V  +ALS     N
Sbjct: 832  STSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLTSVCCSALSSVLSTN 891

Query: 349  KNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            +NL HL L  NT+  KG   L + L   P   L +L L +C L S     ++  LT + +
Sbjct: 892  QNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQS 950

Query: 407  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKL 456
            L  ++L  N++   G +   + +K ++ L Q + +SE  F  E    +E L
Sbjct: 951  LRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYFNYETKSALETL 1001



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 866  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 924

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 925  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 984

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 985  LSEMYFNYETKSALETL 1001


>gi|147789790|emb|CAN73875.1| hypothetical protein VITISV_039541 [Vitis vinifera]
          Length = 541

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L  L+LS+NA G  GV     LL+S     LEEL L N+G+        ++A+ +  
Sbjct: 214 GCVLKYLNLSNNALGEKGVRAFGALLKSQN--NLEELYLMNDGISEEA----ARAVCELI 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      L++     N   +EGA  ++ + K+   LE        +   G  AL+ 
Sbjct: 268 PSTEK------LRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAK 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN    +  + L +ALS    L  + L    L+  GA +IA  L +
Sbjct: 322 ALGTCTRLKKLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKE 381

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +T +LE + +  N+I+V+    L   +  K  L +++++EN+  +EG
Sbjct: 382 STPSLEVLEMAGNDITVEAASTLAACIAAKQCLAKLSLAENELKDEG 428



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 4/165 (2%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           FIAGR   E E   ++      L+   L+ + +  N +   G+ A     +   NL  L 
Sbjct: 192 FIAGRP--EAEALDVMNIFSSALEGCVLKYLNLSNNALGEKGVRAFGALLKSQNNLEELY 249

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L ++ I+ + A  + + +     L IL   + +    GA +I++ +  +  LED   +  
Sbjct: 250 LMNDGISEEAARAVCELIPSTEKLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSST 309

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
            +  +GG+ L KA+   T+LK++++ +N FG E    + K + +F
Sbjct: 310 RVDSEGGVALAKALGTCTRLKKLDLRDNMFGVEAGVALSKALSAF 354



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 11/185 (5%)

Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           + S AL  C            LK      N L  +G +   A+ K    LE + +  +GI
Sbjct: 207 IFSSALEGC-----------VLKYLNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGI 255

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
                 A+ +     + LR L  ++N    +GAI + + + + P+L         + S G
Sbjct: 256 SEEAARAVCELIPSTEKLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEG 315

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             ++AK L   T L+ ++L  N   V+ G+ L KA+     L ++ +S     +EG + +
Sbjct: 316 GVALAKALGTCTRLKKLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAI 375

Query: 454 EKLMK 458
              +K
Sbjct: 376 ANALK 380



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 67/139 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L+++ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L I
Sbjct: 216 VLKYLNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRI 275

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L   + +    GA +I++ +  +  LED   +   +  +GG+ L KA+   T+LK++++ 
Sbjct: 276 LQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLR 335

Query: 131 ENQFGEEGVEEMEKLMKSF 149
           +N FG E    + K + +F
Sbjct: 336 DNMFGVEAGVALSKALSAF 354



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ + K+   LE        +   G  AL+ A     +L+ L+L DN    +  + L +A
Sbjct: 291 ISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRDNMFGVEAGVALSKA 350

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LS    L  + L    L+  GA +IA  L ++T +LE + +  N+I+V+    L   +  
Sbjct: 351 LSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLEMAGNDITVEAASTLAACIAA 410

Query: 121 KTKLKQINVSENQFGEEG 138
           K  L +++++EN+  +EG
Sbjct: 411 KQCLAKLSLAENELKDEG 428



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             A+ K    LE + +  +GI      A+ +     +KLR L  ++N    +GAI + + 
Sbjct: 235 FGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRILQFHNNMTGDEGAIAISEM 294

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P+L         + S G  ++AK L   T L+ ++L  N   V+ G+ L KA+   
Sbjct: 295 VKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRDNMFGVEAGVALSKALSAF 354

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++ +S     +EG + +   +K
Sbjct: 355 KDLTEVYLSYLNLEDEGAKAIANALK 380



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 2/148 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+      K L  V +    +   G  A+++A +E+   L  L +  N IT + A  L  
Sbjct: 347 LSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLEMAGNDITVEAASTLAA 406

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            ++    LA L+L +  LK  GA  I+K L + +  L +V+L  N I   G   L + + 
Sbjct: 407 CIAAKQCLAKLSLAENELKDEGAILISKALEEGHNQLTEVDLNTNSIRRAGARFLAQTVA 466

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
           +K   K +N++ N   +EG++E++ + K
Sbjct: 467 SKPGFKLLNINGNFISDEGIDEVKDIFK 494


>gi|303273528|ref|XP_003056125.1| leucine rich repeat-containing protein [Micromonas pusilla
           CCMP1545]
 gi|226462209|gb|EEH59501.1| leucine rich repeat-containing protein [Micromonas pusilla
           CCMP1545]
          Length = 705

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 182/420 (43%), Gaps = 35/420 (8%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V+   NGI  VG+ A+ +A + N  L  L+L  N +     I L + L    ++  LNL 
Sbjct: 302 VDFSANGIGDVGVVAICEALKSNHALEMLSLASNNLGDSATIQLAEYLKIDKTITTLNLN 361

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              +   GA+++A  L  NTTL  + L  N I  +G   L +A+   + L+ +++S N  
Sbjct: 362 SSGIGDKGAAALADMLKVNTTLSALELNNNSIDYEGTCSLAEALVENSTLETLSLSGNYV 421

Query: 135 GEEGVEEMEKLMK-SFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDS 193
           G  G   +   +K + G+    +  +D G    +       E    DA+  + ++ +N  
Sbjct: 422 GRMGASALANGLKMNSGIKGLFLNGNDIGNLGIQPLCRALSER---DAKLTDLDVGNNGI 478

Query: 194 NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSC 253
                     +                +K  + L  L+L  N    +G   +A+ L  +C
Sbjct: 479 GFEAGKFFADY----------------IKQDSDLTHLNLYMNELCDLGATEIANALSDNC 522

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
             A+E L +  N +   G   L++AL    + +K       L+    G N +   GA+ +
Sbjct: 523 --AIEVLDIGGNNILDAGAMALAEAL----KVNK------TLRTLELGYNPIGARGAQAM 570

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   K    +  + M    I   G   L+DA + N+++  L+L  N +  +G   L Q+L
Sbjct: 571 AESVKFHSKVTTLRMGWCKITKDGAWYLADAIKYNEHICTLDLRGNELGDEGCTALAQSL 630

Query: 374 SKL-PSLAILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQGGLDLVKAMK 430
             +  +L  L+LG   +K  GA ++A+ +  N    L+ +++  N I+  G + L +A++
Sbjct: 631 QVVNENLISLDLGYNEIKDNGAFALAQAIKSNANGALQSISVNNNYITKFGEVALTEAVE 690



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 1/158 (0%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           GRN L NEGA  ++           V+   NGI  VG+ A+ +A + N  L  L+L  N 
Sbjct: 278 GRN-LGNEGAAYVSEALAFNDNATCVDFSANGIGDVGVVAICEALKSNHALEMLSLASNN 336

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           +     I L + L    ++  LNL    +   GA+++A  L  NTTL  + L  N I  +
Sbjct: 337 LGDSATIQLAEYLKIDKTITTLNLNSSGIGDKGAAALADMLKVNTTLSALELNNNSIDYE 396

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           G   L +A+   + L+ +++S N  G  G   +   +K
Sbjct: 397 GTCSLAEALVENSTLETLSLSGNYVGRMGASALANGLK 434



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 91/435 (20%), Positives = 186/435 (42%), Gaps = 39/435 (8%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L D   + ++   ++L+   +  +GA  + +AL+   +   ++     +   G  +I + 
Sbjct: 261 LRDMMGDLRRYSTVDLHGRNLGNEGAAYVSEALAFNDNATCVDFSANGIGDVGVVAICEA 320

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L  N  LE ++L  N +     + L + +K    +  +N++ +  G++G   +  ++K  
Sbjct: 321 LKSNHALEMLSLASNNLGDSATIQLAEYLKIDKTITTLNLNSSGIGDKGAAALADMLKVN 380

Query: 150 GMAAALVLE----DDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
              +AL L     D EG CS  E   E                     N +    + S N
Sbjct: 381 TTLSALELNNNSIDYEGTCSLAEALVE---------------------NSTLETLSLSGN 419

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
              +   ++  + + + +G +   L L+ N  G +G++ L   L S     L +L + NN
Sbjct: 420 YVGRMGASALANGLKMNSGIK--GLFLNGNDIGNLGIQPLCRAL-SERDAKLTDLDVGNN 476

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
           G+G    K  +  +       K++     L +++   N L + GA  +A        +E 
Sbjct: 477 GIGFEAGKFFADYI-------KQDSDLTHLNLYM---NELCDLGATEIANALSDNCAIEV 526

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           +++  N I   G  AL++A + NK LR L L  N I  +GA  + +++     +  L +G
Sbjct: 527 LDIGGNNILDAGAMALAEALKVNKTLRTLELGYNPIGARGAQAMAESVKFHSKVTTLRMG 586

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQ 444
            C +   GA  +A  +  N  +  ++L  NE+  +G   L ++++   + L  +++  N+
Sbjct: 587 WCKITKDGAWYLADAIKYNEHICTLDLRGNELGDEGCTALAQSLQVVNENLISLDLGYNE 646

Query: 445 FGEEGVEEMEKLMKS 459
             + G   + + +KS
Sbjct: 647 IKDNGAFALAQAIKS 661



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 1/137 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  KT+  + +  +GI   G  AL+D  + N  L  L LN+N+I Y+G   L +A
Sbjct: 345 LAEYLKIDKTITTLNLNSSGIGDKGAAALADMLKVNTTLSALELNNNSIDYEGTCSLAEA 404

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  L+L    +   GAS++A  L  N+ ++ + L  N+I   G   L +A+  +
Sbjct: 405 LVENSTLETLSLSGNYVGRMGASALANGLKMNSGIKGLFLNGNDIGNLGIQPLCRALSER 464

Query: 122 -TKLKQINVSENQFGEE 137
             KL  ++V  N  G E
Sbjct: 465 DAKLTDLDVGNNGIGFE 481



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 2   LAAVFKKLKT---LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
           + A+ + LK+   LE + +  N +       L++  + +K +  LNLN + I  KGA  L
Sbjct: 314 VVAICEALKSNHALEMLSLASNNLGDSATIQLAEYLKIDKTITTLNLNSSGIGDKGAAAL 373

Query: 59  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
              L    +L+ L L +  +   G  S+A+ L +N+TLE ++L+ N +   G   L   +
Sbjct: 374 ADMLKVNTTLSALELNNNSIDYEGTCSLAEALVENSTLETLSLSGNYVGRMGASALANGL 433

Query: 119 KNKTKLKQINVSENQFGEEGVEEM 142
           K  + +K + ++ N  G  G++ +
Sbjct: 434 KMNSGIKGLFLNGNDIGNLGIQPL 457



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 67/136 (49%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  NGI        +D  +++  L HLNL  N +   GA  +  ALS   ++ +L
Sbjct: 468 LTDLDVGNNGIGFEAGKFFADYIKQDSDLTHLNLYMNELCDLGATEIANALSDNCAIEVL 527

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           ++G   +  AGA ++A+ L  N TL  + L  N I  +G   + +++K  +K+  + +  
Sbjct: 528 DIGGNNILDAGAMALAEALKVNKTLRTLELGYNPIGARGAQAMAESVKFHSKVTTLRMGW 587

Query: 132 NQFGEEGVEEMEKLMK 147
            +  ++G   +   +K
Sbjct: 588 CKITKDGAWYLADAIK 603


>gi|399497988|emb|CCG20322.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV   A LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFAKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMTGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNCISEEGVDELKEIFK 492



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNCISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A +   +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFAKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG     +                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFAKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 62/137 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A + +    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + 
Sbjct: 234 FAKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P L         + S G S + + L   + L+ ++L  N    + GL L KA+   
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKH 353

Query: 122 TKLKQINVSENQFGEEG 138
             L +I +S     +EG
Sbjct: 354 ENLTEIYLSYLNLEDEG 370


>gi|397488697|ref|XP_003815387.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform 3
            [Pan paniscus]
          Length = 1016

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 125/291 (42%), Gaps = 31/291 (10%)

Query: 196  SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL------ 249
            SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L      
Sbjct: 712  SHAACSHGLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPGCN 771

Query: 250  -RSSCCFALEELKLNNNGLGITGCKLLSKALHD-------------------CYESSKKE 289
             R  C   L EL L++N LG  G +LL   L                     C + +   
Sbjct: 772  IRRLCNQKLVELDLSDNALGDFGIRLLCVGLKHLLCNLKKLWLVSCCLTSACCQDLASVL 831

Query: 290  GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEEN 348
             +  +L     G N L + G  +L    K  +  L+++ +  +G+  V  +ALS     N
Sbjct: 832  STSHSLTRLYVGENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLTSVCCSALSSVLSTN 891

Query: 349  KNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            +NL HL L  NT+  KG   L + L   P   L +L L +C L S     ++  LT + +
Sbjct: 892  QNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQS 950

Query: 407  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKL 456
            L  ++L  N++   G +   + +K ++ L Q + +SE  F  E    +E L
Sbjct: 951  LRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYFNYETKSALETL 1001



 Score = 41.6 bits (96), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 866  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 924

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 925  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 984

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 985  LSEMYFNYETKSALETL 1001


>gi|392332465|ref|XP_003752590.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein LOC400891 homolog [Rattus norvegicus]
 gi|392352210|ref|XP_003751144.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein LOC400891 homolog [Rattus norvegicus]
          Length = 397

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 12/231 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
            LDL DN  G  G E LAD+LR +    + ++ L+ N +G  G + +  AL         
Sbjct: 110 RLDLRDNELGGAGAEALADVLRKNS--VISDVDLSENQIGAAGLQAICTALTL------- 160

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             +P   K+ + G NRLE + A+ LAA+  +   L+ +++  N +  +    L  A  EN
Sbjct: 161 --NPTVQKMQLQG-NRLEEKAAQHLAALLLRHTGLKSLDLSYNQLNDLAGETLGPAVAEN 217

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L  LNL+ N +   GAI   + L     L +L++       +GA ++ + L  N  LE
Sbjct: 218 TGLTELNLSWNHLRGLGAIAFARGLEANIFLKVLDISHNGFGDSGACAVGEALRVNNVLE 277

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           ++N+  N IS  G L L   ++    L+ + +S+N    +G   + K ++S
Sbjct: 278 ELNMRNNRISTSGALKLGLGLQVNQTLRVLIISKNPICSDGCVGLLKSVRS 328



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V +K   +  V++ +N I   G+ A+  A   N  ++ + L  N +  K A  L   
Sbjct: 126 LADVLRKNSVISDVDLSENQIGAAGLQAICTALTLNPTVQKMQLQGNRLEEKAAQHLAAL 185

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +   L  L+L    L      ++   + +NT L ++NL+ N +   G +   + ++  
Sbjct: 186 LLRHTGLKSLDLSYNQLNDLAGETLGPAVAENTGLTELNLSWNHLRGLGAIAFARGLEAN 245

Query: 122 TKLKQINVSENQFGEEGV 139
             LK +++S N FG+ G 
Sbjct: 246 IFLKVLDISHNGFGDSGA 263



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 1/160 (0%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N +  +    L  A  EN  L  LNL+ N +   GAI   + L     L +L
Sbjct: 192 LKSLDLSYNQLNDLAGETLGPAVAENTGLTELNLSWNHLRGLGAIAFARGLEANIFLKVL 251

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           ++       +GA ++ + L  N  LE++N+  N IS  G L L   ++    L+ + +S+
Sbjct: 252 DISHNGFGDSGACAVGEALRVNNVLEELNMRNNRISTSGALKLGLGLQVNQTLRVLIISK 311

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDE 171
           N    +G   + K ++S   ++ L L D  G     E DE
Sbjct: 312 NPICSDGCVGLLKSVRS-NKSSGLELLDVSGIQVSRECDE 350



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           +   G+   GI AL+     N  ++ L+L DN +   GA  L   L K   ++ ++L + 
Sbjct: 85  LQHRGLGPQGIRALASTLTSNLYIKRLDLRDNELGGAGAEALADVLRKNSVISDVDLSEN 144

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
            + +AG  +I   LT N T++ + L  N +  +    L   +   T LK +++S NQ 
Sbjct: 145 QIGAAGLQAICTALTLNPTVQKMQLQGNRLEEKAAQHLAALLLRHTGLKSLDLSYNQL 202



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%)

Query: 328 MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
           +   G+   GI AL+     N  ++ L+L DN +   GA  L   L K   ++ ++L + 
Sbjct: 85  LQHRGLGPQGIRALASTLTSNLYIKRLDLRDNELGGAGAEALADVLRKNSVISDVDLSEN 144

Query: 388 LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
            + +AG  +I   LT N T++ + L  N +  +    L   +   T LK +++S NQ 
Sbjct: 145 QIGAAGLQAICTALTLNPTVQKMQLQGNRLEEKAAQHLAALLLRHTGLKSLDLSYNQL 202


>gi|320164588|gb|EFW41487.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 485

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 15/238 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK   +L+ L LS N   PI    +ADLLR +    ++ L L  N +G      ++ AL 
Sbjct: 43  LKVNTKLIFLSLSTN---PIAAVTIADLLRVNKT--IQNLFLQENQIGDADAVAIADALK 97

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                     + L LKV     N++ + GA  +A   K   TL+++ + +N I   G  A
Sbjct: 98  -----VNTTLNDLDLKV-----NQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVA 147

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++A + N  L  L L +N I   GA  + +AL+   ++  L L    +  AGA +IA+ 
Sbjct: 148 IANALKLNTTLARLLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEA 207

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L  NTTL ++ L   +I   G   + +A+K  T L  + +S NQ G+ G + + + +K
Sbjct: 208 LKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALK 265



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 76/137 (55%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++  N I   G  A++DA + N  L+ L L++N I   GA+ +  AL    +LA 
Sbjct: 101 TLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIANALKLNTTLAR 160

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L +  +  AGA +IA+ LT NTT+ ++ L  N+I   G   + +A+K  T L ++ + 
Sbjct: 161 LLLVENQIGKAGAQAIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLTELRLH 220

Query: 131 ENQFGEEGVEEMEKLMK 147
           + Q G+ G + + + +K
Sbjct: 221 QTQIGDVGAQAIAEALK 237



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 72/137 (52%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ + + +N I   G  A+++A + N  L  L L +N I   GA  + +AL+   ++  
Sbjct: 129 TLKKLRLDENQIGDAGAVAIANALKLNTTLARLLLVENQIGKAGAQAIAEALTVNTTVTE 188

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    +  AGA +IA+ L  NTTL ++ L   +I   G   + +A+K  T L  + +S
Sbjct: 189 LRLDKNQIGDAGAQAIAEALKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTTLIDLQLS 248

Query: 131 ENQFGEEGVEEMEKLMK 147
            NQ G+ G + + + +K
Sbjct: 249 GNQIGDIGAQAIAEALK 265



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 24/251 (9%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+ +  + N KL  L+L+ N I    A+ +   L    ++  L L +  +  A A +IA 
Sbjct: 38  AVVEGLKVNTKLIFLSLSTNPI---AAVTIADLLRVNKTIQNLFLQENQIGDADAVAIAD 94

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L  NTTL D++L  N+I   G + +  A+K    LK++ + ENQ G+ G   +   +K 
Sbjct: 95  ALKVNTTLNDLDLKVNQIGDAGAVAIADALKLNMTLKKLRLDENQIGDAGAVAIANALKL 154

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
               A L+L +++   +  +   E+   N +  E         D N   +A  Q+     
Sbjct: 155 NTTLARLLLVENQIGKAGAQAIAEALTVNTTVTE------LRLDKNQIGDAGAQAIAE-- 206

Query: 209 QSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
                      +LK    L EL L     G +G + +A+ L+ +    L +L+L+ N +G
Sbjct: 207 -----------ALKVNTTLTELRLHQTQIGDVGAQAIAEALKVNTT--LIDLQLSGNQIG 253

Query: 269 ITGCKLLSKAL 279
             G + +++AL
Sbjct: 254 DIGAQAIAEAL 264



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 76/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + +  KT++++ + +N I      A++DA + N  L  L+L  N I   GA+ +  A
Sbjct: 64  IADLLRVNKTIQNLFLQENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAVAIADA 123

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +  AGA +IA  L  NTTL  + L  N+I   G   + +A+   
Sbjct: 124 LKLNMTLKKLRLDENQIGDAGAVAIANALKLNTTLARLLLVENQIGKAGAQAIAEALTVN 183

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T + ++ + +NQ G+ G + + + +K
Sbjct: 184 TTVTELRLDKNQIGDAGAQAIAEALK 209



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 23/228 (10%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           +    ++D    NK +++L L +N I    A+ +  AL    +L  L+L    +  AGA 
Sbjct: 59  IAAVTIADLLRVNKTIQNLFLQENQIGDADAVAIADALKVNTTLNDLDLKVNQIGDAGAV 118

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           +IA  L  N TL+ + L  N+I   G + +  A+K  T L ++ + ENQ G+ G +    
Sbjct: 119 AIADALKLNMTLKKLRLDENQIGDAGAVAIANALKLNTTLARLLLVENQIGKAGAQ---- 174

Query: 145 LMKSFGMAAALVLEDDEGECS-DEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQS 203
                 +A AL +     E   D+ Q  ++  +  ++A   N+ L+            + 
Sbjct: 175 -----AIAEALTVNTTVTELRLDKNQIGDAGAQAIAEALKVNTTLT------------EL 217

Query: 204 HNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
             +  Q  +   Q+   +LK    L++L LS N  G IG + +A+ L+
Sbjct: 218 RLHQTQIGDVGAQAIAEALKVNTTLIDLQLSGNQIGDIGAQAIAEALK 265


>gi|340380815|ref|XP_003388917.1| PREDICTED: uncharacterized protein C14orf166B homolog [Amphimedon
           queenslandica]
          Length = 455

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 134/313 (42%), Gaps = 23/313 (7%)

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
           L DD  +   E   E  EE+   DA G  + +   DS     AS+     S+Q  +    
Sbjct: 52  LSDDVSDTGWETDLEIEEEKEKYDATGQKNYVKACDSIGIVPASHFMRCLSSQEPSIDLS 111

Query: 217 SHMSLKTGARLVE-----------LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
            H     GA+ +            L+LS N   P G   + D+L+ +C   +  L L+NN
Sbjct: 112 HHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCY--ITHLDLSNN 169

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
           G+  TG  +L   L     +S    + L L       +  +++ A+ L+ + K    +  
Sbjct: 170 GIAATGAVMLLDIL-----ASNTTVTHLNLS-----GSSFDDKAAEPLSEIIKSSIRVTH 219

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + +  N +       +  A  E++ L+HL+L+ N +  KGA+ + Q L     L  LNL 
Sbjct: 220 LNLSHNELSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLS 279

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
                + GA ++A  L  NTTL  +++T N I + G   + K ++    L+ + +  N  
Sbjct: 280 YNGFGTEGAVALADSLKINTTLTHLDITDNRILIDGVRAIAKVLQTIDSLQSLKIGHNPI 339

Query: 446 GEEGVEEMEKLMK 458
              GV  + + +K
Sbjct: 340 QIIGVIALLEALK 352



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           + H+++  NGI   G   L D    N  + HLNL+ ++   K A PL + +     +  L
Sbjct: 161 ITHLDLSNNGIAATGAVMLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHL 220

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL    L  A    I   L ++  L+ ++L+ N +  +G + + + +K    LK++N+S 
Sbjct: 221 NLSHNELSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSY 280

Query: 132 NQFGEEG 138
           N FG EG
Sbjct: 281 NGFGTEG 287



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 77/149 (51%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ML  +     T+ H+ +  +         LS+  + + ++ HLNL+ N ++    + +G 
Sbjct: 178 MLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNELSEASGVLIGA 237

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL++   L  L+L    L+  GA +IA+ L  N  L+ +NL+ N    +G + L  ++K 
Sbjct: 238 ALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTEGAVALADSLKI 297

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSF 149
            T L  +++++N+   +GV  + K++++ 
Sbjct: 298 NTTLTHLDITDNRILIDGVRAIAKVLQTI 326



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 65/122 (53%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++ A   + + L+H+++  N +   G  A++   + N+ L+ LNL+ N    +GA+ L  
Sbjct: 234 LIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNGFGTEGAVALAD 293

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           +L    +L  L++ D  +   G  +IAK L    +L+ + +  N I + G + L++A+KN
Sbjct: 294 SLKINTTLTHLDITDNRILIDGVRAIAKVLQTIDSLQSLKIGHNPIQIIGVIALLEALKN 353

Query: 121 KT 122
            T
Sbjct: 354 GT 355



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 69/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+ + K    + H+ +  N +       +  A  E++ L+HL+L+ N +  KGA+ + Q 
Sbjct: 207 LSEIIKSSIRVTHLNLSHNELSEASGVLIGAALAESEVLQHLDLSWNYLRRKGAVAIAQG 266

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  LNL      + GA ++A  L  NTTL  +++T N I + G   + K ++  
Sbjct: 267 LKPNQMLKKLNLSYNGFGTEGAVALADSLKINTTLTHLDITDNRILIDGVRAIAKVLQTI 326

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L+ + +  N     GV  + + +K
Sbjct: 327 DSLQSLKIGHNPIQIIGVIALLEALK 352



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 47/279 (16%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           ++L+ + +  KGA  +  AL    ++  LNL    L   G  +I   L +N  +  ++L+
Sbjct: 108 IDLSHHYVGAKGAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDLS 167

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEG 162
            N I+  G + L+  + + T +  +N+S + F ++  E + +++KS      L       
Sbjct: 168 NNGIAATGAVMLLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHL------- 220

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHN-------ASNQSHNNSNQSHNTSN 215
                                   NLSHN+ + +         A ++   + + S N   
Sbjct: 221 ------------------------NLSHNELSEASGVLIGAALAESEVLQHLDLSWNYLR 256

Query: 216 QS-----HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGIT 270
           +         LK    L +L+LS N FG  G   LAD L+ +    L  L + +N + I 
Sbjct: 257 RKGAVAIAQGLKPNQMLKKLNLSYNGFGTEGAVALADSLKINTT--LTHLDITDNRILID 314

Query: 271 GCKLLSKALH--DCYESSKKEGSPLALKVFIAGRNRLEN 307
           G + ++K L   D  +S K   +P+ +   IA    L+N
Sbjct: 315 GVRAIAKVLQTIDSLQSLKIGHNPIQIIGVIALLEALKN 353



 Score = 41.6 bits (96), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 27/268 (10%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A++ A   N  + +LNL+ N +  +G + +   L +   +  L+L +  + + GA  
Sbjct: 119 GAKAIAVALISNTTVTNLNLSYNGLCPEGGVAIIDMLKENCYITHLDLSNNGIAATGAVM 178

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE-EGVEEMEK 144
           +   L  NTT+  +NL+ +    +    L + +K+  ++  +N+S N+  E  GV     
Sbjct: 179 LLDILASNTTVTHLNLSGSSFDDKAAEPLSEIIKSSIRVTHLNLSHNELSEASGV----- 233

Query: 145 LMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSH 204
                 +  A + E +  +  D   +    +   + A+G   N      N S+N      
Sbjct: 234 ------LIGAALAESEVLQHLDLSWNYLRRKGAVAIAQGLKPNQMLKKLNLSYNG----- 282

Query: 205 NNSNQSHNTSNQSHM--SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKL 262
                   T     +  SLK    L  LD++DN     GV  +A +L++    +L+ LK+
Sbjct: 283 ------FGTEGAVALADSLKINTTLTHLDITDNRILIDGVRAIAKVLQT--IDSLQSLKI 334

Query: 263 NNNGLGITGCKLLSKALHDCYESSKKEG 290
            +N + I G   L +AL +   S K  G
Sbjct: 335 GHNPIQIIGVIALLEALKNGTSSVKYLG 362



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 6/109 (5%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  + L+ + +  NG    G  AL+D+ + N  L HL++ DN I   G   + + 
Sbjct: 263 IAQGLKPNQMLKKLNLSYNGFGTEGAVALADSLKINTTLTHLDITDNRILIDGVRAIAKV 322

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT------LEDVNLTCN 104
           L  + SL  L +G   ++  G  ++ + L + T+      L+ + +T N
Sbjct: 323 LQTIDSLQSLKIGHNPIQIIGVIALLEALKNGTSSVKYLGLDGITVTLN 371


>gi|229595531|ref|XP_001016935.3| hypothetical protein TTHERM_01535640 [Tetrahymena thermophila]
 gi|225565936|gb|EAR96690.3| hypothetical protein TTHERM_01535640 [Tetrahymena thermophila
           SB210]
          Length = 710

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 194/457 (42%), Gaps = 77/457 (16%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLN--DNTITYKGAIPLGQALSKLPSLA--I 70
           +++  N I   GI+ L  A      L +L L    + I  +GA  LGQAL+   +++   
Sbjct: 271 LQLYVNQIGDQGISGLGFALANCTNLSNLTLYLYPSQIGDQGASGLGQALANCTNISKLT 330

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC--NEISVQGGLDLVKAMKNKTKLKQI- 127
           LNLGD  +   G S +   L + T L ++ L    N+I  QG   L +A+ N T +  + 
Sbjct: 331 LNLGDNQIGDQGISGLGFALANCTNLSNLTLYLYGNQIGDQGASGLGQALANCTNISNLT 390

Query: 128 -NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDE---ESEEENDSDAEG 183
            N+  NQ  ++G         + G+ +AL       +C++ +      +  +  D  A G
Sbjct: 391 LNLGRNQIDDQG---------ALGLGSALA------DCTNLQNLTLILDGNQIGDEGASG 435

Query: 184 DNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVE 243
             S L+                      N +N S+++L          LS N  G  G  
Sbjct: 436 LGSVLA----------------------NCANLSNLTLY---------LSGNQIGDEGAS 464

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 303
           GL  +L +    +   L L+ N +G+ G   L  AL +    S      L L +     N
Sbjct: 465 GLGSVLANCANLSNLTLYLSQNQIGVIGAIGLGSALANYIHLSN-----LTLNL---SYN 516

Query: 304 RLENEGAKMLAAVFKKLKTLERV--EMPQNGIYHVGITALSDAFEENKNLRHL--NLNDN 359
           ++ ++GA  L +       L  +  ++  N I   G + L        NL +L  +LN N
Sbjct: 517 QIGDQGASGLGSALANCNNLSNLILDLCDNQISGQGASGLGSGLVNCTNLSNLTLHLNRN 576

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCL----LKSAGASSIAKYLTDNTTLEDVNLTCN 415
            I  +GA+ LG AL+   +L+ L L  CL    ++  GASS       N +   ++L  N
Sbjct: 577 QIDDQGALGLGSALANCTNLSNLKL--CLSANQIRDLGASSFGLASCTNISNLALDLRYN 634

Query: 416 EISVQGGLDLVKAMKNKTKLK--QINVSENQFGEEGV 450
           +I  QG L L  A+ N T L+   +++S NQ  ++G 
Sbjct: 635 QIHEQGALGLGSALANCTHLQNLSLDLSGNQIDDQGA 671



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 198/468 (42%), Gaps = 60/468 (12%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLN--DNTITYKGAIPLGQALSKLPSLA--I 70
           + +  N I   G + L  A      L +L LN   N I  +GA  LG AL+   +L+   
Sbjct: 122 LNLSYNQIGDEGASGLGSALANCINLSNLTLNLRYNQIGDEGASGLGSALANCINLSNLT 181

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC-NEISVQGGLDLVKAMKNKTKLKQI-- 127
           LNL D  +   GAS +   L +   L ++ L   N+I  QG  +L  A+ N T L ++  
Sbjct: 182 LNLRDKKIGDEGASGLGSALANCINLSNLTLDLRNQIDDQGTSELGSALANCTNLSKLTL 241

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
           N+S+NQ G++G+  +   + +    + L L+    +  D+             A  + +N
Sbjct: 242 NLSDNQIGDQGISGLGFALANCTNLSNLTLQLYVNQIGDQGISGLGF------ALANCTN 295

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
           LS N + + + +       S      +N +++S  T      L+L DN  G  G+ GL  
Sbjct: 296 LS-NLTLYLYPSQIGDQGASGLGQALANCTNISKLT------LNLGDNQIGDQGISGLGF 348

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
            L +    +   L L  N +G  G   L +AL +C   S      L L +   GRN++++
Sbjct: 349 ALANCTNLSNLTLYLYGNQIGDQGASGLGQALANCTNISN-----LTLNL---GRNQIDD 400

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNG--IYHVGITALSDAFEENKNLRHLNL--NDNTITY 363
           +GA  L +       L+ + +  +G  I   G + L        NL +L L  + N I  
Sbjct: 401 QGALGLGSALADCTNLQNLTLILDGNQIGDEGASGLGSVLANCANLSNLTLYLSGNQIGD 460

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
           +GA  LG  L+   +L               S++  YL+ N           +I V G +
Sbjct: 461 EGASGLGSVLANCANL---------------SNLTLYLSQN-----------QIGVIGAI 494

Query: 424 DLVKAMKNKTKLKQI--NVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
            L  A+ N   L  +  N+S NQ G++G   +   + +    + L+L+
Sbjct: 495 GLGSALANYIHLSNLTLNLSYNQIGDQGASGLGSALANCNNLSNLILD 542



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 207/496 (41%), Gaps = 71/496 (14%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLN--DNTITYKGAIPLGQALSKLPSLAILN 72
           + +  N I   G + L  A      L +L LN  D  I  +GA  LG AL+   +L+ L 
Sbjct: 152 LNLRYNQIGDEGASGLGSALANCINLSNLTLNLRDKKIGDEGASGLGSALANCINLSNLT 211

Query: 73  LGDCL--LKSAGASSIAKYLTDNTTLE--DVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
           L D    +   G S +   L + T L    +NL+ N+I  QG   L  A+ N T L  + 
Sbjct: 212 L-DLRNQIDDQGTSELGSALANCTNLSKLTLNLSDNQIGDQGISGLGFALANCTNLSNLT 270

Query: 129 VS--ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           +    NQ G++G+  +   + +    + L L     +  D+      +      A  + +
Sbjct: 271 LQLYVNQIGDQGISGLGFALANCTNLSNLTLYLYPSQIGDQGASGLGQ------ALANCT 324

Query: 187 NLSHNDSNHSHN-ASNQSHNNSNQS-HNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEG 244
           N+S    N   N   +Q  +    +  N +N S+++L          L  N  G  G  G
Sbjct: 325 NISKLTLNLGDNQIGDQGISGLGFALANCTNLSNLTLY---------LYGNQIGDQGASG 375

Query: 245 LADLLRSSCCFALEELKLN--NNGLGITGCKLLSKALHDCY----------------ESS 286
           L   L +  C  +  L LN   N +   G   L  AL DC                 E +
Sbjct: 376 LGQALAN--CTNISNLTLNLGRNQIDDQGALGLGSALADCTNLQNLTLILDGNQIGDEGA 433

Query: 287 KKEGSPLA-------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVE--MPQNGIYHVG 337
              GS LA       L ++++G N++ +EGA  L +V      L  +   + QN I  +G
Sbjct: 434 SGLGSVLANCANLSNLTLYLSG-NQIGDEGASGLGSVLANCANLSNLTLYLSQNQIGVIG 492

Query: 338 ITALSDAFEENKNLRH--LNLNDNTITYKGAIPLGQALSKLPSLA--ILNLGDCLLKSAG 393
              L  A     +L +  LNL+ N I  +GA  LG AL+   +L+  IL+L D  +   G
Sbjct: 493 AIGLGSALANYIHLSNLTLNLSYNQIGDQGASGLGSALANCNNLSNLILDLCDNQISGQG 552

Query: 394 ASSIAKYLTDNTTLEDVNLTC--NEISVQGGLDLVKAMKNKTKLK--QINVSENQFGEEG 449
           AS +   L + T L ++ L    N+I  QG L L  A+ N T L   ++ +S NQ  + G
Sbjct: 553 ASGLGSGLVNCTNLSNLTLHLNRNQIDDQGALGLGSALANCTNLSNLKLCLSANQIRDLG 612

Query: 450 VEEMEKLMKSFGMAAA 465
                    SFG+A+ 
Sbjct: 613 A-------SSFGLASC 621



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 142/350 (40%), Gaps = 40/350 (11%)

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDE-EQDEESEEENDSDAEGDNSNL 188
           S NQ G+EG   +   + +    + L L+  E +  DE   D  S   N  +      NL
Sbjct: 65  SNNQIGDEGASGLGSALANCINLSNLTLQLYENQIGDEGASDLGSALANCINLSNLTLNL 124

Query: 189 SHN---DSNHS------HNASNQSHNNSNQSHNTSNQSHMSLKTGARL--------VELD 231
           S+N   D   S       N  N S+   N  +N       S   G+ L        + L+
Sbjct: 125 SYNQIGDEGASGLGSALANCINLSNLTLNLRYNQIGDEGAS-GLGSALANCINLSNLTLN 183

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLN-NNGLGITGCKLLSKALHDCYESSKKEG 290
           L D   G  G  GL   L +  C  L  L L+  N +   G   L  AL +C   SK   
Sbjct: 184 LRDKKIGDEGASGLGSALAN--CINLSNLTLDLRNQIDDQGTSELGSALANCTNLSK--- 238

Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER--VEMPQNGIYHVGITALSDAFEEN 348
             L L +     N++ ++G   L         L    +++  N I   GI+ L  A    
Sbjct: 239 --LTLNL---SDNQIGDQGISGLGFALANCTNLSNLTLQLYVNQIGDQGISGLGFALANC 293

Query: 349 KNLRHLN--LNDNTITYKGAIPLGQALSKLPSLA--ILNLGDCLLKSAGASSIAKYLTDN 404
            NL +L   L  + I  +GA  LGQAL+   +++   LNLGD  +   G S +   L + 
Sbjct: 294 TNLSNLTLYLYPSQIGDQGASGLGQALANCTNISKLTLNLGDNQIGDQGISGLGFALANC 353

Query: 405 TTLEDVNLTC--NEISVQGGLDLVKAMKNKTKLKQ--INVSENQFGEEGV 450
           T L ++ L    N+I  QG   L +A+ N T +    +N+  NQ  ++G 
Sbjct: 354 TNLSNLTLYLYGNQIGDQGASGLGQALANCTNISNLTLNLGRNQIDDQGA 403



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 39/195 (20%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERV--EMPQNGIYHVGITALSDAFEENKNLRHL- 354
           ++   N++ +EGA  L +       L  +  ++ +N I   G + L  A     NL +L 
Sbjct: 62  YLKSNNQIGDEGASGLGSALANCINLSNLTLQLYENQIGDEGASDLGSALANCINLSNLT 121

Query: 355 -NLNDNTITYKGAIPLGQALSKLPSLA--------------------------------I 381
            NL+ N I  +GA  LG AL+   +L+                                 
Sbjct: 122 LNLSYNQIGDEGASGLGSALANCINLSNLTLNLRYNQIGDEGASGLGSALANCINLSNLT 181

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC-NEISVQGGLDLVKAMKNKTKLKQ--I 438
           LNL D  +   GAS +   L +   L ++ L   N+I  QG  +L  A+ N T L +  +
Sbjct: 182 LNLRDKKIGDEGASGLGSALANCINLSNLTLDLRNQIDDQGTSELGSALANCTNLSKLTL 241

Query: 439 NVSENQFGEEGVEEM 453
           N+S+NQ G++G+  +
Sbjct: 242 NLSDNQIGDQGISGL 256


>gi|17546075|ref|NP_519477.1| GALA protein 4 [Ralstonia solanacearum GMI1000]
 gi|17428371|emb|CAD15058.1| type III effector protein gala6 [Ralstonia solanacearum GMI1000]
          Length = 620

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 191/472 (40%), Gaps = 99/472 (20%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LEH+E+ +       I+A   A   +  L+ LNLN   I  +GA    + L+   SL  L
Sbjct: 165 LEHLEIGR--CTGSAISAEGLAHLASMPLKSLNLNGIEIGVEGA----RTLAASKSLVSL 218

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG-----GLDLV----------- 115
           +L  C +        A+ L  + +++ ++L+ N I   G     G  LV           
Sbjct: 219 SLIGCGI----GDRAAQALVASRSIQCLDLSVNRIGRDGAQALAGAPLVSLNLHNNEIGN 274

Query: 116 ---KAMKNKTKLKQINVSENQFGEEGVEEME--KLMKSFGMAAALVLEDDEGECSDEEQD 170
              + +     L  ++VS N  G  G E      ++K   +A  ++  D           
Sbjct: 275 EGARVLATSRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGGMISGDG---------- 324

Query: 171 EESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVEL 230
                   + A  DN +L+  D       SN    ++       ++S +SLK G      
Sbjct: 325 --------AQALADNKSLTDLD------LSNNRLGDAGAQALADSESFVSLKLGG----- 365

Query: 231 DLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA----LHDCYESS 286
               N  G  G E LA          L+ L L+ N +G  G   L +A    L  C  + 
Sbjct: 366 ----NEIGADGAEALAR------NVVLQSLNLSYNPIGFWGVNALGRAKLRKLDLCACAI 415

Query: 287 KKEG-SPLALKVFIA----GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
             +G S LA    +A    G NR+ ++GA+ LA    K  TL  + +  N I+ VG  AL
Sbjct: 416 DSDGASALARNTSLASLYLGSNRIGDDGARALA----KNSTLTLLNLSGNNIHAVGAQAL 471

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           +     N +L  L+L+ N I   G      AL+  P L  LNL    + S GA  +AK  
Sbjct: 472 A----SNDSLITLDLSRNGIGDDGT----AALACHPRLTSLNLSRNQIGSTGAQQLAK-- 521

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             + TL +++L+ N I  +G     +A+   T L  +NVS N  GE G   +
Sbjct: 522 --SATLAELDLSENRIGPEG----AEALARSTVLTTLNVSYNAIGEAGARAL 567



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 152/375 (40%), Gaps = 94/375 (25%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A V    +TL  +++  NG+ + G    ++AF  N  L+ L+L    I+  GA    QAL
Sbjct: 277 ARVLATSRTLTSLDVSNNGVGNAG----AEAFAGNTVLKQLSLAGGMISGDGA----QAL 328

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
           +   SL  L+L +  L  AGA ++A    D+ +   + L  NEI    G D  +A+    
Sbjct: 329 ADNKSLTDLDLSNNRLGDAGAQALA----DSESFVSLKLGGNEI----GADGAEALARNV 380

Query: 123 KLKQINVSENQFGEEGVEEMEKL-MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
            L+ +N+S N  G  GV  + +  ++   + A  +  D +G  +       +     S+ 
Sbjct: 381 VLQSLNLSYNPIGFWGVNALGRAKLRKLDLCACAI--DSDGASALARNTSLASLYLGSNR 438

Query: 182 EGDNS-------------NLSHNDSNHSHNASNQSHNNS--------------------- 207
            GD+              NLS N+  H+  A   + N+S                     
Sbjct: 439 IGDDGARALAKNSTLTLLNLSGNNI-HAVGAQALASNDSLITLDLSRNGIGDDGTAALAC 497

Query: 208 -----------NQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
                      NQ  +T  Q    L   A L ELDLS+N  GP G E LA   RS+    
Sbjct: 498 HPRLTSLNLSRNQIGSTGAQQ---LAKSATLAELDLSENRIGPEGAEALA---RSTV--- 548

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L  L ++ N +G  G + L+++              ++L    A RN +  +GAK+L A 
Sbjct: 549 LTTLNVSYNAIGEAGARALAES--------------VSLTSLDARRNGIGEDGAKVLEAN 594

Query: 317 FKKLKTLERVEMPQN 331
            +   T      PQN
Sbjct: 595 TRITGT------PQN 603


>gi|393228439|gb|EJD36085.1| RNI-like protein, partial [Auricularia delicata TFB-10046 SS5]
          Length = 395

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L+E ++SDNA G   V+ L  L   +   ++  +KLNN G G     ++++AL     ++
Sbjct: 94  LIEFNVSDNAIGKY-VDALVPLFSKN--HSIRVIKLNNLGFGPYAGNIVAEALI----AA 146

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
             +G P  L+V I+GR+ +EN  A     +F     L  V+M    I   G   +++   
Sbjct: 147 VSQGEPSNLRVMISGRHHIENGAAPAWGRMFAAHGGLTGVDMQSAWIGAAGFKEIANGLA 206

Query: 347 ENKNLRHLNLNDN---TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             K LRHLNL+DN        G      AL     L   N+  C +++ GA +I   L +
Sbjct: 207 HCKGLRHLNLDDNLGRDSEDDGWSAFAGALRSWTRLRFCNVASCKMENEGAQAILDVLAE 266


>gi|407835250|gb|EKF99203.1| hypothetical protein TCSYLVIO_009887 [Trypanosoma cruzi]
          Length = 494

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 18/224 (8%)

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           ++C   L  + L+ N +G  G K L +++         + +PL +   +A  N++ + G 
Sbjct: 215 AACHRDLTSVDLSWNNVGPLGTKCLLRSM---------QRNPLCVYHLMA--NKIGDAGT 263

Query: 311 KMLAAVFKKL--KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
             L    ++   K    + + +N + H G  A+    E N+ +  ++L+ NT+  KG   
Sbjct: 264 TCLCEAMQRFAGKGTTTLNLFRNDVRHKGCEAVGRLLENNEFILDVSLHSNTLGLKGMQL 323

Query: 369 LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLV 426
           L Q  +  P+ +  LNLG+C+L   GA   A  +T N   LE +NL  N  S  GG+ +V
Sbjct: 324 LRQHFTAAPNRVRSLNLGNCMLGDEGAPEAAALITANLPALERLNLASNGFSDDGGVIIV 383

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           KA+   T L  ++ ++N FG + V+   +L+   G A  L L D
Sbjct: 384 KALLKNTFLVMVSCADNTFGTKTVDATAELI---GTAKVLKLLD 424



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 5/143 (3%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCL 77
           +N + H G  A+    E N+ +  ++L+ NT+  KG   L Q  +  P+ +  LNLG+C+
Sbjct: 285 RNDVRHKGCEAVGRLLENNEFILDVSLHSNTLGLKGMQLLRQHFTAAPNRVRSLNLGNCM 344

Query: 78  LKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
           L   GA   A  +T N   LE +NL  N  S  GG+ +VKA+   T L  ++ ++N FG 
Sbjct: 345 LGDEGAPEAAALITANLPALERLNLASNGFSDDGGVIIVKALLKNTFLVMVSCADNTFGT 404

Query: 137 EGVEEMEKLMKSFGMAAALVLED 159
           + V+   +L+   G A  L L D
Sbjct: 405 KTVDATAELI---GTAKVLKLLD 424



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 28/165 (16%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR----HLNLN 357
           +N + +EGA  +A V +K +T++ + + QNGI  VG  AL+ AF  N N        N N
Sbjct: 133 QNNIGDEGAVTMAEVLRKNETIQYLNLAQNGITDVGGIALASAFIPNVNPNGQPGQWNRN 192

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLG-DCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             TI   G                 +LG D LL  + A++  + LT       V+L+ N 
Sbjct: 193 LFTIILTGN----------------DLGDDTLLAMSKAAACHRDLT------SVDLSWNN 230

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           +   G   L+++M+ +  L   ++  N+ G+ G   + + M+ F 
Sbjct: 231 VGPLGTKCLLRSMQ-RNPLCVYHLMANKIGDAGTTCLCEAMQRFA 274


>gi|225436920|ref|XP_002275003.1| PREDICTED: RAN GTPase-activating protein 1 isoform 2 [Vitis
           vinifera]
 gi|225436922|ref|XP_002274973.1| PREDICTED: RAN GTPase-activating protein 1 isoform 1 [Vitis
           vinifera]
          Length = 541

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L  L+LS+NA G  GV     LL+S     LEEL L N+G+        ++A+ +  
Sbjct: 214 GCVLKYLNLSNNALGEKGVRAFGALLKSQN--NLEELYLMNDGISEEA----ARAVCELI 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      L++     N   +EGA  ++ + K+   LE        +   G  AL+ 
Sbjct: 268 PSTEK------LRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAK 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A      L+ L+L DN    +  + L +ALS    L  + L    L+  GA +IA  L +
Sbjct: 322 ALGTCTRLKKLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKE 381

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +T +LE + +  N+I+V+    L   +  K  L +++++EN+  +EG
Sbjct: 382 STPSLEVLEMAGNDITVEAASTLAACIAAKQCLAKLSLAENELKDEG 428



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 4/165 (2%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           FIAGR   E E   ++      L+   L+ + +  N +   G+ A     +   NL  L 
Sbjct: 192 FIAGRP--EAEALDVMNIFSSALEGCVLKYLNLSNNALGEKGVRAFGALLKSQNNLEELY 249

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L ++ I+ + A  + + +     L IL   + +    GA +I++ +  +  LED   +  
Sbjct: 250 LMNDGISEEAARAVCELIPSTEKLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSST 309

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
            +  +GG+ L KA+   T+LK++++ +N FG E    + K + +F
Sbjct: 310 RVDSEGGVALAKALGTCTRLKKLDLRDNMFGVEAGVALSKALSAF 354



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 11/185 (5%)

Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           + S AL  C            LK      N L  +G +   A+ K    LE + +  +GI
Sbjct: 207 IFSSALEGC-----------VLKYLNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGI 255

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
                 A+ +     + LR L  ++N    +GAI + + + + P+L         + S G
Sbjct: 256 SEEAARAVCELIPSTEKLRILQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEG 315

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             ++AK L   T L+ ++L  N   V+ G+ L KA+     L ++ +S     +EG + +
Sbjct: 316 GVALAKALGTCTRLKKLDLRDNMFGVEAGVALSKALSAFKDLTEVYLSYLNLEDEGAKAI 375

Query: 454 EKLMK 458
              +K
Sbjct: 376 ANALK 380



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 67/139 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L+++ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L I
Sbjct: 216 VLKYLNLSNNALGEKGVRAFGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRI 275

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L   + +    GA +I++ +  +  LED   +   +  +GG+ L KA+   T+LK++++ 
Sbjct: 276 LQFHNNMTGDEGAIAISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLR 335

Query: 131 ENQFGEEGVEEMEKLMKSF 149
           +N FG E    + K + +F
Sbjct: 336 DNMFGVEAGVALSKALSAF 354



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++ + K+   LE        +   G  AL+ A     +L+ L+L DN    +  + L +A
Sbjct: 291 ISEMVKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRDNMFGVEAGVALSKA 350

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LS    L  + L    L+  GA +IA  L ++T +LE + +  N+I+V+    L   +  
Sbjct: 351 LSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLEMAGNDITVEAASTLAACIAA 410

Query: 121 KTKLKQINVSENQFGEEG 138
           K  L +++++EN+  +EG
Sbjct: 411 KQCLAKLSLAENELKDEG 428



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             A+ K    LE + +  +GI      A+ +     +KLR L  ++N    +GAI + + 
Sbjct: 235 FGALLKSQNNLEELYLMNDGISEEAARAVCELIPSTEKLRILQFHNNMTGDEGAIAISEM 294

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + + P+L         + S G  ++AK L   T L+ ++L  N   V+ G+ L KA+   
Sbjct: 295 VKRSPALEDFRCSSTRVDSEGGVALAKALGTCTRLKKLDLRDNMFGVEAGVALSKALSAF 354

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++ +S     +EG + +   +K
Sbjct: 355 KDLTEVYLSYLNLEDEGAKAIANALK 380



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 2/148 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQ 60
           L+      K L  V +    +   G  A+++A +E+   L  L +  N IT + A  L  
Sbjct: 347 LSKALSAFKDLTEVYLSYLNLEDEGAKAIANALKESTPSLEVLEMAGNDITVEAASTLAA 406

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            ++    LA L+L +  LK  GA  I+K L + +  L +V+L  N I   G   L + + 
Sbjct: 407 CIAAKQCLAKLSLAENELKDEGAILISKALEEGHNQLTEVDLNTNSIRRAGARFLAQTVA 466

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
           +K   K +N++ N   +EG++E++ + K
Sbjct: 467 SKPGFKLLNINGNFISDEGIDEVKDIFK 494


>gi|224062521|ref|XP_002300846.1| predicted protein [Populus trichocarpa]
 gi|222842572|gb|EEE80119.1| predicted protein [Populus trichocarpa]
          Length = 543

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L  L+LS+NA G  GV     LL++     LEEL L N+G+        ++A+ +  
Sbjct: 214 GCNLRYLNLSNNALGEKGVRAFEKLLKTQN--NLEELYLINDGISEEA----ARAVCELI 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G  AL++
Sbjct: 268 PSTEK------LKVLHFHNNMTGDEGAVAIAEMVKRSTALEDFRCSSTRVGLEGGVALAE 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A     +LR L+L DN    +  I L ++L     L    L    L+  GA ++A  L +
Sbjct: 322 ALGSCNHLRKLDLRDNMFGVEAGIALSRSLFAFADLTEAYLSYLNLEDEGAEALANALKE 381

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
              +LE +++  N+I+ +G   L   +  K  L ++N+SEN+  +EG
Sbjct: 382 CAPSLEVLDMAGNDITAKGASSLAACIAAKQFLTKLNLSENELKDEG 428



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 26  GITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL++A +E    L  L++  N IT KGA  L   ++    L  LNL +  LK  GA 
Sbjct: 371 GAEALANALKECAPSLEVLDMAGNDITAKGASSLAACIAAKQFLTKLNLSENELKDEGAI 430

Query: 85  SIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            IAK +   +  L +V+L+ N I   G   L +A+ +K   K +N++ N   +EG++E++
Sbjct: 431 LIAKAIEVGHGQLNEVDLSINAIRRAGARLLAQAVVDKPGFKSLNINGNYISDEGIDEVK 490

Query: 144 KLMK 147
            + K
Sbjct: 491 DIFK 494



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 82/166 (49%), Gaps = 4/166 (2%)

Query: 298 FIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           F+AGR+  E+E  +++      L+   L  + +  N +   G+ A     +   NL  L 
Sbjct: 192 FVAGRS--ESEALEVMNIFSSALEGCNLRYLNLSNNALGEKGVRAFEKLLKTQNNLEELY 249

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L ++ I+ + A  + + +     L +L+  + +    GA +IA+ +  +T LED   +  
Sbjct: 250 LINDGISEEAARAVCELIPSTEKLKVLHFHNNMTGDEGAVAIAEMVKRSTALEDFRCSST 309

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
            + ++GG+ L +A+ +   L+++++ +N FG E    + + + +F 
Sbjct: 310 RVGLEGGVALAEALGSCNHLRKLDLRDNMFGVEAGIALSRSLFAFA 355



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 68/139 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L ++ +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 217 LRYLNLSNNALGEKGVRAFEKLLKTQNNLEELYLINDGISEEAARAVCELIPSTEKLKVL 276

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +T LED   +   + ++GG+ L +A+ +   L+++++ +
Sbjct: 277 HFHNNMTGDEGAVAIAEMVKRSTALEDFRCSSTRVGLEGGVALAEALGSCNHLRKLDLRD 336

Query: 132 NQFGEEGVEEMEKLMKSFG 150
           N FG E    + + + +F 
Sbjct: 337 NMFGVEAGIALSRSLFAFA 355



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 116/290 (40%), Gaps = 41/290 (14%)

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEG 183
           L+ +N+S N  GE+GV   EKL+K+      L L +D       E+   +  E     E 
Sbjct: 217 LRYLNLSNNALGEKGVRAFEKLLKTQNNLEELYLIND----GISEEAARAVCELIPSTEK 272

Query: 184 DNSNLSHNDSNHSHNA---SNQSHNNSNQSHNTSNQSHMSLKTGARLVE----------L 230
                 HN+      A   +     ++       + + + L+ G  L E          L
Sbjct: 273 LKVLHFHNNMTGDEGAVAIAEMVKRSTALEDFRCSSTRVGLEGGVALAEALGSCNHLRKL 332

Query: 231 DLSDNAFGPIGVEGLADLLRSSCCFA-LEELKLNNNGLGITGCKLLSKALHDCYES---- 285
           DL DN FG   VE    L RS   FA L E  L+   L   G + L+ AL +C  S    
Sbjct: 333 DLRDNMFG---VEAGIALSRSLFAFADLTEAYLSYLNLEDEGAEALANALKECAPSLEVL 389

Query: 286 -------SKKEGSPLAL----KVFIA----GRNRLENEGAKMLA-AVFKKLKTLERVEMP 329
                  + K  S LA     K F+       N L++EGA ++A A+      L  V++ 
Sbjct: 390 DMAGNDITAKGASSLAACIAAKQFLTKLNLSENELKDEGAILIAKAIEVGHGQLNEVDLS 449

Query: 330 QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            N I   G   L+ A  +    + LN+N N I+ +G   +      LP++
Sbjct: 450 INAIRRAGARLLAQAVVDKPGFKSLNINGNYISDEGIDEVKDIFKGLPNV 499


>gi|296215583|ref|XP_002754192.1| PREDICTED: uncharacterized protein C14orf166B [Callithrix jacchus]
          Length = 471

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 23/257 (8%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   + +L+L DN     G+  L ++L+ +  + L+E+ ++NN LG+ G +++S  
Sbjct: 110 IALVSNTTVTKLELEDNGITEEGILSLVEMLQEN--YYLQEMNISNNQLGLKGARIISDF 167

Query: 279 LHDCYES----------SKKEGSPLALKVFIA---------GRNRLENEGAKMLAAVFKK 319
           L     S           K+E + L  +V  +           N+  + G + L  +   
Sbjct: 168 LETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLAT 227

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  +++  N  +  G  AL +    N  L  LNL+ N +  +GA+ LG+ L     L
Sbjct: 228 NVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLGNEGALALGEVLRLNSCL 287

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
             L++    + + GAS I++ L  N +L+ + L  N ISV G L L+ ++K   K+++++
Sbjct: 288 VYLDVSGNDISNEGASKISRGLESNESLKVLKLFLNPISVDGALLLILSIKRNPKSRMEE 347

Query: 438 INVSENQFGEEGVEEME 454
           +++S     E+ V+ ++
Sbjct: 348 LDISNVLVSEQFVKTLD 364



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N  +  G  AL +    N  L  LNL+ N +  +GA+ LG+ L     L  L
Sbjct: 231 LTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLNLSMNGLGNEGALALGEVLRLNSCLVYL 290

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++    + + GAS I++ L  N +L+ + L  N ISV G L L+ ++K   K++++++++
Sbjct: 291 DVSGNDISNEGASKISRGLESNESLKVLKLFLNPISVDGALLLILSIKRNPKSRMEELDI 350

Query: 130 SENQFGEEGVEEME 143
           S     E+ V+ ++
Sbjct: 351 SNVLVSEQFVKTLD 364



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 134/326 (41%), Gaps = 63/326 (19%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NTT+  + L  N I+ +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYMNLNHHGLGPRGTKAIAIALVSNTTVTKLELEDNGITEEGILS 135

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++N+S NQ G +G   +   +++   ++   L     E S  +  EES
Sbjct: 136 LVEMLQENYYLQEMNISNNQLGLKGARIISDFLET-NTSSIWSL-----ELSGNDFKEES 189

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELD 231
                  A      LS   SN+     + SH   NQ  +   + H+   L T   L  LD
Sbjct: 190 -------AALLCQVLS---SNYRIKKLDLSH---NQFSDVGGE-HLGQMLATNVGLTSLD 235

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
           LS N F   G   L + LR +    L +L L+ NGLG                       
Sbjct: 236 LSWNHFHTRGAVALCNGLRGNV--TLTKLNLSMNGLG----------------------- 270

Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
                          NEGA  L  V +    L  +++  N I + G + +S   E N++L
Sbjct: 271 ---------------NEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISRGLESNESL 315

Query: 352 RHLNLNDNTITYKGAIPLGQALSKLP 377
           + L L  N I+  GA+ L  ++ + P
Sbjct: 316 KVLKLFLNPISVDGALLLILSIKRNP 341



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLA 69
           T+  +E+  NGI   GI +L +  +EN  L+ +N+++N +  KGA  +   L +   S+ 
Sbjct: 117 TVTKLELEDNGITEEGILSLVEMLQENYYLQEMNISNNQLGLKGARIISDFLETNTSSIW 176

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L     K   A+ + + L+ N  ++ ++L+ N+ S  GG  L + +     L  +++
Sbjct: 177 SLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDL 236

Query: 130 SENQFGEEG 138
           S N F   G
Sbjct: 237 SWNHFHTRG 245



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 58/119 (48%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L      N +++ L+L+ N  +  G   LGQ L+    L  L+L      + GA ++   
Sbjct: 193 LCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNG 252

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           L  N TL  +NL+ N +  +G L L + ++  + L  ++VS N    EG  ++ + ++S
Sbjct: 253 LRGNVTLTKLNLSMNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISRGLES 311


>gi|390345116|ref|XP_001198127.2| PREDICTED: uncharacterized protein C14orf166B homolog
           [Strongylocentrotus purpuratus]
          Length = 337

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 40/223 (17%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L T   +V+L++SDN   P G   ++D+L+ +C  A  EL L+ N LG  G   +S  
Sbjct: 155 IALVTNTTIVKLNISDNWLDPEGGIAISDMLKENCYIA--ELDLSENRLGSVGAIAVSDM 212

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L                         L+N              TL  V +  NG      
Sbjct: 213 L-------------------------LQN-------------STLTHVTLSGNGFEDKTA 234

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A +D    NK L +LNL+ N         LG A+ +  +L  L+L    ++  GA +IA
Sbjct: 235 DAFADVILNNKKLEYLNLSHNDFGELAGAILGPAIEENITLRHLDLSWNHIRRRGALAIA 294

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           K + +N  L  +NL+ N  S+ G   L  A+K+ T L++++V+
Sbjct: 295 KGIMNNIGLRKINLSWNGFSIDGAQALGDALKSNTNLEELDVT 337



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 10/201 (4%)

Query: 259 ELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
           EL + ++GLG  G K ++ AL           +   +K+ I+  N L+ EG   ++ + K
Sbjct: 137 ELVMKHHGLGPGGAKAIAIALVT---------NTTIVKLNISD-NWLDPEGGIAISDMLK 186

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
           +   +  +++ +N +  VG  A+SD   +N  L H+ L+ N    K A      +     
Sbjct: 187 ENCYIAELDLSENRLGSVGAIAVSDMLLQNSTLTHVTLSGNGFEDKTADAFADVILNNKK 246

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L  LNL          + +   + +N TL  ++L+ N I  +G L + K + N   L++I
Sbjct: 247 LEYLNLSHNDFGELAGAILGPAIEENITLRHLDLSWNHIRRRGALAIAKGIMNNIGLRKI 306

Query: 439 NVSENQFGEEGVEEMEKLMKS 459
           N+S N F  +G + +   +KS
Sbjct: 307 NLSWNGFSIDGAQALGDALKS 327



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL HV +  NG       A +D    NKKL +LNL+ N         LG A+ +  +L  
Sbjct: 218 TLTHVTLSGNGFEDKTADAFADVILNNKKLEYLNLSHNDFGELAGAILGPAIEENITLRH 277

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    ++  GA +IAK + +N  L  +NL+ N  S+ G   L  A+K+ T L++++V+
Sbjct: 278 LDLSWNHIRRRGALAIAKGIMNNIGLRKINLSWNGFSIDGAQALGDALKSNTNLEELDVT 337



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +  +++ +N +  VG  A+SD   +N  L H+ L+ N    K A      +     L  L
Sbjct: 191 IAELDLSENRLGSVGAIAVSDMLLQNSTLTHVTLSGNGFEDKTADAFADVILNNKKLEYL 250

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           NL          + +   + +N TL  ++L+ N I  +G L + K + N   L++IN+S 
Sbjct: 251 NLSHNDFGELAGAILGPAIEENITLRHLDLSWNHIRRRGALAIAKGIMNNIGLRKINLSW 310

Query: 132 NQFGEEGVEEMEKLMKS 148
           N F  +G + +   +KS
Sbjct: 311 NGFSIDGAQALGDALKS 327



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 60/120 (50%)

Query: 17  MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 76
           M  +G+   G  A++ A   N  +  LN++DN +  +G I +   L +   +A L+L + 
Sbjct: 140 MKHHGLGPGGAKAIAIALVTNTTIVKLNISDNWLDPEGGIAISDMLKENCYIAELDLSEN 199

Query: 77  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
            L S GA +++  L  N+TL  V L+ N    +        + N  KL+ +N+S N FGE
Sbjct: 200 RLGSVGAIAVSDMLLQNSTLTHVTLSGNGFEDKTADAFADVILNNKKLEYLNLSHNDFGE 259



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 51  TYK------GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 104
           TYK      G IP+   L  +    ++ +    L   GA +IA  L  NTT+  +N++ N
Sbjct: 113 TYKEACRINGVIPVSYFLRHIGDTELV-MKHHGLGPGGAKAIAIALVTNTTIVKLNISDN 171

Query: 105 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
            +  +GG+ +   +K    + ++++SEN+ G  G
Sbjct: 172 WLDPEGGIAISDMLKENCYIAELDLSENRLGSVG 205


>gi|148679186|gb|EDL11133.1| mCG131296 [Mus musculus]
          Length = 228

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 72/157 (45%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + G + LAA+  KL  L + ++  N I  VG   L+    +   LR  NL+ N I 
Sbjct: 20  NQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIG 79

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
           + G   L   L KLP L   +L    +   G   +A  L     L   +L+ N I   GG
Sbjct: 80  HVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGG 139

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + LVK++ +   L++I +  N  GE    E+ + +  
Sbjct: 140 VQLVKSLTHFEHLEEIKLGNNALGEPTALELAQRLPP 176



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 21/210 (10%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L++L L++N +G  G + L+  L    E          L+ F    N++ + G + LAA+
Sbjct: 12  LQDLCLSHNQIGDVGTQCLAAILPKLPE----------LRKFDLSHNQIGDVGTQCLAAI 61

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
             KL  L +  +  N I HVG   L+    +   LR  +L+ N I   G   L   L KL
Sbjct: 62  LPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKL 121

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
           P L   +L    +  AG   + K LT    LE++ L  N +     L+L  A +   +L+
Sbjct: 122 PELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALEL--AQRLPPQLR 179

Query: 437 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
            + +  +  G EG         + G+A AL
Sbjct: 180 VLCLPSSHLGPEG---------ALGLAQAL 200



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 66/147 (44%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA+  KL  L   ++  N I  VG   L+    +  +LR  NL+ N I + G   L   
Sbjct: 30  LAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAI 89

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L KLP L   +L    +   G   +A  L     L   +L+ N I   GG+ LVK++ + 
Sbjct: 90  LPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHF 149

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
             L++I +  N  GE    E+ + +  
Sbjct: 150 EHLEEIKLGNNALGEPTALELAQRLPP 176



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK---LNNNGLGITGCKLLSKALHDCY 283
           L + DLS N  G +G + LA +L       L EL+   L++N +G  G + L+  L    
Sbjct: 40  LRKFDLSHNQIGDVGTQCLAAILPK-----LPELRKFNLSHNQIGHVGTQCLAAILPKLP 94

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           E          L+ F   RN++ + G + LAA+  KL  L + ++  N I   G   L  
Sbjct: 95  E----------LRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVK 144

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           +    ++L  + L +N +    A+ L Q L   P L +L L    L   GA  +A+ L  
Sbjct: 145 SLTHFEHLEEIKLGNNALGEPTALELAQRLP--PQLRVLCLPSSHLGPEGALGLAQALEQ 202

Query: 404 NTTLEDVNLTCNEIS 418
              +E+V+L  N ++
Sbjct: 203 CPHIEEVSLAENNLA 217



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA+  KL  L    +  N I HVG   L+    +  +LR  +L+ N I   G   L   
Sbjct: 58  LAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAI 117

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L KLP L   +L    +  AG   + K LT    LE++ L  N +     L+L  A +  
Sbjct: 118 LPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALEL--AQRLP 175

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
            +L+ + +  +  G EG         + G+A AL
Sbjct: 176 PQLRVLCLPSSHLGPEG---------ALGLAQAL 200



 Score = 38.5 bits (88), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 47/110 (42%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L+ L L+ N I   G   L   L KLP L   +L    +   G   +A  L     L   
Sbjct: 12  LQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKF 71

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           NL+ N+I   G   L   +    +L++ ++S NQ G+ G + +  ++   
Sbjct: 72  NLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKL 121


>gi|428173219|gb|EKX42123.1| hypothetical protein GUITHDRAFT_141588 [Guillardia theta CCMP2712]
          Length = 639

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 20/236 (8%)

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
           H ++ T   L  L L     GP G   LA  + + C  ++  L L +N +G  GC  LS 
Sbjct: 152 HQNMSTATSLQTLTLRGCKIGPSGARALAVGMEAGC--SITSLDLGDNSIGTEGCTALSF 209

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
            L        K  S  A+K      N + N+G   L+       +L  + +  N I   G
Sbjct: 210 PL--------KATSKCAIKYLNLSSNEIRNDGLSALSPGLLTNTSLVCLRLAMNYIRPQG 261

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG----------DC 387
              L++  ++   LR L L  N I   G   L  AL+++ SL  L L            C
Sbjct: 262 AMILTEFLDQCTALRELELGYNLIRCHGCSLLSAALTRMNSLTHLGLRRNEVAAEVTRPC 321

Query: 388 LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           +L+  GA+SI++ L  NT L+ ++L  N I + G  +   A+   + L+ + +  N
Sbjct: 322 VLEVQGATSISRSLWKNTCLQSLDLGLNSIGMGGAQNFGWALGYNSTLQSLRLDWN 377



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 170/416 (40%), Gaps = 72/416 (17%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++++ +  N I + G++ALS     N  L  L L  N I  +GA+ L + L +  +L  L
Sbjct: 219 IKYLNLSSNEIRNDGLSALSPGLLTNTSLVCLRLAMNYIRPQGAMILTEFLDQCTALREL 278

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS----------VQGGLDLVKAMKNK 121
            LG  L++  G S ++  LT   +L  + L  NE++          VQG   + +++   
Sbjct: 279 ELGYNLIRCHGCSLLSAALTRMNSLTHLGLRRNEVAAEVTRPCVLEVQGATSISRSLWKN 338

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL--VLEDDEGECSDEEQDEESEEENDS 179
           T L+ +++  N  G  G +       +FG A      L+    + +D   +  S     +
Sbjct: 339 TCLQSLDLGLNSIGMGGAQ-------NFGWALGYNSTLQSLRLDWNDLRGN--SILLMPA 389

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
              G+   LS  D +         +  SN   +  +++ ++L  G++   L +  NA G 
Sbjct: 390 STRGEGFRLSELDLS--------CNKLSNDGASNLSEALLNLNWGSKKQVLHIRGNAVGM 441

Query: 240 IGVEGLADLLRSSCCFALEE--LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
           +G+  L  +L        EE  L L++N +G  GCK+ ++          +    L L+ 
Sbjct: 442 VGLRSLLPVLEPD-----EEGALDLSDNDIGDEGCKIFAR---------DRPNLLLGLRR 487

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL-RHLNL 356
                NR+ + G   LA   +   TLE + + +N      IT L +       L R L  
Sbjct: 488 LNLSGNRITSAGLFDLAKALRTSTTLEEINLSRN-----QITVLPNLLACPPRLQRILVF 542

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
           N++T+             +LP   I+ L        G ++I  YL      E  NL
Sbjct: 543 NNDTL-------------QLPPPEIVRL--------GPAAIVAYLQRGLAQERFNL 577



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 2/109 (1%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGA 83
           G  AL+   E    +  L+L DN+I  +G   L   L      AI  LNL    +++ G 
Sbjct: 175 GARALAVGMEAGCSITSLDLGDNSIGTEGCTALSFPLKATSKCAIKYLNLSSNEIRNDGL 234

Query: 84  SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           S+++  L  NT+L  + L  N I  QG + L + +   T L+++ +  N
Sbjct: 235 SALSPGLLTNTSLVCLRLAMNYIRPQGAMILTEFLDQCTALRELELGYN 283


>gi|399498016|emb|CCG20336.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|326509281|dbj|BAJ91557.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326521232|dbj|BAJ96819.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 552

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 50/283 (17%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L++SDNA G  GV    +LL+S     LEEL + N+G+     K LS       
Sbjct: 214 GSVLRYLNISDNALGEKGVRAFTELLKSQG--DLEELYVMNDGISGEAAKALSELIPSTE 271

Query: 277 --KALHDCYESSKKEGS-PLA--------LKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
             K LH     +  EG+ P+A        L+ F     R+ ++G   LA        L++
Sbjct: 272 KLKVLHFHNNMTGDEGAMPIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKK 331

Query: 326 VEMPQN------------------GIYHV----------GITALSDAFEEN-KNLRHLNL 356
           +++  N                  G+  +          G  A+ D  +++   L  L +
Sbjct: 332 LDIRDNLFGVEAGVALSKTLPKLGGLVELYLSDLNLENEGTIAIVDVLKQSAPQLEVLEM 391

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCN 415
             N IT K A  + + L+ + SL  L L +  LK AGA +IAK L + +  LE+++++ N
Sbjct: 392 AGNEITAKAAKAVAECLTAMQSLKKLTLAENELKDAGAVTIAKSLQEGHPGLEELDVSTN 451

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
                G     +A+ NK     +N++ N   +EG++E+++++K
Sbjct: 452 LFQRSGARCFAQAVANKPGFALLNINSNFISDEGIDEVKEILK 494



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 8/211 (3%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL- 320
            +N   GI    +    L    ES K + + + +  F+AGR   E+E   ++    K L 
Sbjct: 160 FSNRSFGIGAANVAGPIL----ESIKSQLTEVDISDFVAGRP--EDEALDVMRIFSKALA 213

Query: 321 -KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  + +  N +   G+ A ++  +   +L  L + ++ I+ + A  L + +     L
Sbjct: 214 GSVLRYLNISDNALGEKGVRAFTELLKSQGDLEELYVMNDGISGEAAKALSELIPSTEKL 273

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            +L+  + +    GA  IA+ +  +  LE    +   I   GG+ L +A+   T+LK+++
Sbjct: 274 KVLHFHNNMTGDEGAMPIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLD 333

Query: 440 VSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
           + +N FG E    + K +   G    L L D
Sbjct: 334 IRDNLFGVEAGVALSKTLPKLGGLVELYLSD 364



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 2/124 (1%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+ D  +++  +L  L +  N IT K A  + + L+ + SL  L L +  LK AGA 
Sbjct: 371 GTIAIVDVLKQSAPQLEVLEMAGNEITAKAAKAVAECLTAMQSLKKLTLAENELKDAGAV 430

Query: 85  SIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
           +IAK L + +  LE+++++ N     G     +A+ NK     +N++ N   +EG++E++
Sbjct: 431 TIAKSLQEGHPGLEELDVSTNLFQRSGARCFAQAVANKPGFALLNINSNFISDEGIDEVK 490

Query: 144 KLMK 147
           +++K
Sbjct: 491 EILK 494



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 68/149 (45%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L ++ +  N +   G+ A ++  +    L  L + ++ I+ + A  L + +     L +
Sbjct: 216 VLRYLNISDNALGEKGVRAFTELLKSQGDLEELYVMNDGISGEAAKALSELIPSTEKLKV 275

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+  + +    GA  IA+ +  +  LE    +   I   GG+ L +A+   T+LK++++ 
Sbjct: 276 LHFHNNMTGDEGAMPIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDIR 335

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           +N FG E    + K +   G    L L D
Sbjct: 336 DNLFGVEAGVALSKTLPKLGGLVELYLSD 364



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 27/291 (9%)

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD--EGECSDEEQDEESEEEN---- 177
           L+ +N+S+N  GE+GV    +L+KS G    L + +D   GE +    +     E     
Sbjct: 217 LRYLNISDNALGEKGVRAFTELLKSQGDLEELYVMNDGISGEAAKALSELIPSTEKLKVL 276

Query: 178 --DSDAEGDNSNLSHND-SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSD 234
              ++  GD   +   +    S N  +   + +    +       +L T  RL +LD+ D
Sbjct: 277 HFHNNMTGDEGAMPIAEMVKRSPNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDIRD 336

Query: 235 NAFGPIGVEGLADLLRSSCCFA---LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
           N FG      L+  L          L +L L N G         + A+ D  + S  +  
Sbjct: 337 NLFGVEAGVALSKTLPKLGGLVELYLSDLNLENEG---------TIAIVDVLKQSAPQ-- 385

Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKN 350
              L+V     N +  + AK +A     +++L+++ + +N +   G   ++ + +E +  
Sbjct: 386 ---LEVLEMAGNEITAKAAKAVAECLTAMQSLKKLTLAENELKDAGAVTIAKSLQEGHPG 442

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           L  L+++ N     GA    QA++  P  A+LN+    +   G   + + L
Sbjct: 443 LEELDVSTNLFQRSGARCFAQAVANKPGFALLNINSNFISDEGIDEVKEIL 493


>gi|300691655|ref|YP_003752650.1| type III effector protein [Ralstonia solanacearum PSI07]
 gi|299078715|emb|CBJ51374.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
           solanacearum PSI07]
          Length = 608

 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 177/408 (43%), Gaps = 56/408 (13%)

Query: 60  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           Q L+   SLA L+L  C +    A ++A     + +++ ++L+ N I   G   L  A  
Sbjct: 205 QRLAASTSLASLSLIGCEIGDRAAEALAA----SQSIKSLDLSANRIGRDGARALAGA-- 258

Query: 120 NKTKLKQINVSENQFGEEGVEEM--EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
               L  +N+  N  G+EG   +   + + S  +++  + +   G  +D     +   + 
Sbjct: 259 ---PLVSLNLYSNAIGDEGARALATSRTLTSLNLSSNGIDDAGAGALADNTLLTQLNLQG 315

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
           +    G    L+++ S    +  N         +   ++   +L     L  L +  N  
Sbjct: 316 NRIGRGGAQALANSTSLTDLDLGN---------NRLGDRGARALAGSKSLTSLSVRGNEI 366

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA-----LHDCYESSKKEG-S 291
           G  G + LA   R++    L+ L L+ N + + G + L  +     L  C       G S
Sbjct: 367 GDKGAKALA---RNAT---LKSLNLSYNLISLRGVRALGGSATLSVLDLCACDIDSSGAS 420

Query: 292 PLALKVFIA----GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
            LA    +A    G NR+ + GA+ LA    K  TL R+ +  NGI+  G  AL+     
Sbjct: 421 ALARNASLASLYLGSNRIGDRGARALA----KNSTLTRLALSGNGIHTTGAQALAG---- 472

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
           N +L  L+L  N I   GA     AL++ P L  L+L    ++SAGA  +AK    + TL
Sbjct: 473 NDSLISLDLGGNEIDDDGA----AALARHPRLISLDLRGNRIRSAGAQQLAK----SATL 524

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            +++L+ N I  +G     +A+   T L  +NVS+N  G+ G   + K
Sbjct: 525 AELDLSANRIGAEG----AEALSRSTVLTTLNVSDNAIGDAGALALAK 568



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A    K  TL  + +  NGI+  G  AL+     N  L  L+L  N I   GA     AL
Sbjct: 443 ARALAKNSTLTRLALSGNGIHTTGAQALAG----NDSLISLDLGGNEIDDDGA----AAL 494

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
           ++ P L  L+L    ++SAGA  +AK    + TL +++L+ N I  +G     +A+   T
Sbjct: 495 ARHPRLISLDLRGNRIRSAGAQQLAK----SATLAELDLSANRIGAEG----AEALSRST 546

Query: 123 KLKQINVSENQFGEEGVEEMEK 144
            L  +NVS+N  G+ G   + K
Sbjct: 547 VLTTLNVSDNAIGDAGALALAK 568



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 152/366 (41%), Gaps = 77/366 (21%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + +  NGI   G  AL+D    N  L  LNL  N I   GA    QAL+   SL 
Sbjct: 282 RTLTSLNLSSNGIDDAGAGALAD----NTLLTQLNLQGNRIGRGGA----QALANSTSLT 333

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+LG+  L   GA    + L  + +L  +++  NEI  +G     KA+     LK +N+
Sbjct: 334 DLDLGNNRLGDRGA----RALAGSKSLTSLSVRGNEIGDKG----AKALARNATLKSLNL 385

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           S N     GV       ++ G +A L + D    C+            D D+ G  S L+
Sbjct: 386 SYNLISLRGV-------RALGGSATLSVLD---LCA-----------CDIDSSG-ASALA 423

Query: 190 HNDSNHS-HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
            N S  S +  SN+            ++   +L   + L  L LS N     G + LA  
Sbjct: 424 RNASLASLYLGSNR----------IGDRGARALAKNSTLTRLALSGNGIHTTGAQALAG- 472

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
                  +L  L L  N +   G   L++  H           P  + + + G NR+ + 
Sbjct: 473 -----NDSLISLDLGGNEIDDDGAAALAR--H-----------PRLISLDLRG-NRIRSA 513

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA+ LA    K  TL  +++  N I   G  ALS     +  L  LN++DN I   GA+ 
Sbjct: 514 GAQQLA----KSATLAELDLSANRIGAEGAEALS----RSTVLTTLNVSDNAIGDAGALA 565

Query: 369 LGQALS 374
           L ++ S
Sbjct: 566 LAKSTS 571


>gi|296086512|emb|CBI32101.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 179/417 (42%), Gaps = 64/417 (15%)

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           N GD      G   +A+ L  N   E+V+   N I+  G       +++   LK +++S 
Sbjct: 206 NFGD-----EGLFFLAESLAYNQNAEEVSFAANGITAAGLKAFDGVLQSNIVLKTLDLSG 260

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           N  G+EG + +             +L D+ G    ++    S +  D  A+     L  N
Sbjct: 261 NPIGDEGAKCLCD-----------ILIDNAG---IQKLQLNSADLGDEGAKAIAEMLKKN 306

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVE------LDLSDNAFGPIGVEGL 245
            S      +N   N  + S  TS         G  L+E      + L+ N  G +GV  L
Sbjct: 307 SSLRIVELNN---NMIDYSGFTS--------LGGALLENNTIRNIHLNGNYGGALGVAAL 355

Query: 246 ADLLRSSCCFALEELKLNNNGLGITGCKLL----------------------SKALHDCY 283
           A  L ++   +L EL L+ N +G  G ++L                      S+      
Sbjct: 356 AKGLEANK--SLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVA 413

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           E  KK  S L L +++   N + +EGA+ +A   K+ +++  +++  N I+  G++ ++ 
Sbjct: 414 EYIKKAKSLLWLNLYM---NDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIAG 470

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             ++N  +  L L  N I  +GA  L + L     +  L LG C + + GA  IA  L  
Sbjct: 471 VLKDNTVITTLELGYNPIGPEGAKALSEVLKFHGKIKTLKLGWCQIGAKGAEFIADTLKY 530

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 459
           NTT+  ++L  N +  +G + L ++MK   + L  +++  N+  +EG   + + +K+
Sbjct: 531 NTTISTLDLRANGLRDEGAVCLARSMKVVNEALASLDLGFNEIRDEGAFAIAQALKA 587



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 47/275 (17%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS++ LKT      LDLS N  G  G + L D+L  +    +++L+LN+  LG  G K +
Sbjct: 248 QSNIVLKT------LDLSGNPIGDEGAKCLCDILIDNA--GIQKLQLNSADLGDEGAKAI 299

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           ++ L       KK  S   L++     N ++  G   L     +  T+  + +  N    
Sbjct: 300 AEML-------KKNSS---LRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGA 349

Query: 336 VGITALSDAFEENKNLRHLNLNDNTI-----------------------------TYKGA 366
           +G+ AL+   E NK+LR L+L+ N+I                             + +GA
Sbjct: 350 LGVAALAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGA 409

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + + + K  SL  LNL    +   GA  IA  L +N ++  ++L  N I  +G   + 
Sbjct: 410 FHVAEYIKKAKSLLWLNLYMNDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIA 469

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             +K+ T +  + +  N  G EG + + +++K  G
Sbjct: 470 GVLKDNTVITTLELGYNPIGPEGAKALSEVLKFHG 504



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 164/404 (40%), Gaps = 38/404 (9%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E V    NGI   G+ A     + N  L+ L+L+ N I  +GA  L   L     +  L 
Sbjct: 226 EEVSFAANGITAAGLKAFDGVLQSNIVLKTLDLSGNPIGDEGAKCLCDILIDNAGIQKLQ 285

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    L   GA +IA+ L  N++L  V L  N I   G   L  A+     ++ I+++ N
Sbjct: 286 LNSADLGDEGAKAIAEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGN 345

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
             G  GV  + K +              E   S  E         D       S LS   
Sbjct: 346 YGGALGVAALAKGL--------------EANKSLRELHLHGNSIGDEGVRVLMSGLS--- 388

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGVEGLADLLR 250
              SH       +  N   ++    H++  +K    L+ L+L  N  G  G E +AD L+
Sbjct: 389 ---SHKGKLTLLDIGNNEISSRGAFHVAEYIKKAKSLLWLNLYMNDIGDEGAEKIADALK 445

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +   A   + L  N +   G   ++  L D    +  E           G N +  EGA
Sbjct: 446 ENRSIA--TIDLGGNNIHAKGVSKIAGVLKDNTVITTLE----------LGYNPIGPEGA 493

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           K L+ V K    ++ +++    I   G   ++D  + N  +  L+L  N +  +GA+ L 
Sbjct: 494 KALSEVLKFHGKIKTLKLGWCQIGAKGAEFIADTLKYNTTISTLDLRANGLRDEGAVCLA 553

Query: 371 QALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           +++  +  +LA L+LG   ++  GA +IA+ L  N   EDV +T
Sbjct: 554 RSMKVVNEALASLDLGFNEIRDEGAFAIAQALKAN---EDVAVT 594



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 126/292 (43%), Gaps = 22/292 (7%)

Query: 2   LAAVFKKL---KTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIP 57
           +AA+ K L   K+L  + +  N I   G+  L      +K KL  L++ +N I+ +GA  
Sbjct: 352 VAALAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFH 411

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           + + + K  SL  LNL    +   GA  IA  L +N ++  ++L  N I  +G   +   
Sbjct: 412 VAEYIKKAKSLLWLNLYMNDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIAGV 471

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           +K+ T +  + +  N  G EG + + +++K  G    L L    G C    Q      E 
Sbjct: 472 LKDNTVITTLELGYNPIGPEGAKALSEVLKFHGKIKTLKL----GWC----QIGAKGAEF 523

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
            +D    N+ +S  D   ++   ++      +S    N++         L  LDL  N  
Sbjct: 524 IADTLKYNTTISTLDL-RANGLRDEGAVCLARSMKVVNEA---------LASLDLGFNEI 573

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
              G   +A  L+++   A+  L L +N L   G   L+ A    YE S+KE
Sbjct: 574 RDEGAFAIAQALKANEDVAVTSLNLASNFLTKFGQSALTDARDHVYEMSEKE 625



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 159/377 (42%), Gaps = 65/377 (17%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A+++  ++N  LR + LN+N I Y G   LG AL +  ++  ++L      + G ++
Sbjct: 295 GAKAIAEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGALGVAA 354

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEM-E 143
           +AK L  N +L +++L  N I  +G   L+  +  +K KL  +++  N+    G   + E
Sbjct: 355 LAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVAE 414

Query: 144 KLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQS 203
            + K+  +    +  +D G       DE +E+  D                         
Sbjct: 415 YIKKAKSLLWLNLYMNDIG-------DEGAEKIAD------------------------- 442

Query: 204 HNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLN 263
                           +LK    +  +DL  N     GV  +A +L+ +    +  L+L 
Sbjct: 443 ----------------ALKENRSIATIDLGGNNIHAKGVSKIAGVLKDNTV--ITTLELG 484

Query: 264 NNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
            N +G  G K LS+ L       K  G    LK+   G  ++  +GA+ +A   K   T+
Sbjct: 485 YNPIGPEGAKALSEVL-------KFHGKIKTLKL---GWCQIGAKGAEFIADTLKYNTTI 534

Query: 324 ERVEMPQNGIYHVGITALSDAFE-ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI- 381
             +++  NG+   G   L+ + +  N+ L  L+L  N I  +GA  + QAL     +A+ 
Sbjct: 535 STLDLRANGLRDEGAVCLARSMKVVNEALASLDLGFNEIRDEGAFAIAQALKANEDVAVT 594

Query: 382 -LNLGDCLLKSAGASSI 397
            LNL    L   G S++
Sbjct: 595 SLNLASNFLTKFGQSAL 611



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 162/373 (43%), Gaps = 73/373 (19%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + KK  +L  VE+  N I + G T+L  A  EN  +R+++LN N   Y GA+     
Sbjct: 299 IAEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGN---YGGAL----- 350

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN 120
                               G +++AK L  N +L +++L  N I  +G   L+  +  +
Sbjct: 351 --------------------GVAALAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSH 390

Query: 121 KTKLKQINVSENQFGEEG---VEEMEKLMKSFGMAAALVLED--DEGECSDEEQDEESEE 175
           K KL  +++  N+    G   V E  K  KS  +   L + D  DEG     E+  ++ +
Sbjct: 391 KGKLTLLDIGNNEISSRGAFHVAEYIKKAKSL-LWLNLYMNDIGDEG----AEKIADALK 445

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
           EN S A  D   L  N+  H+   S  +                 LK    +  L+L  N
Sbjct: 446 ENRSIATID---LGGNNI-HAKGVSKIAG---------------VLKDNTVITTLELGYN 486

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
             GP G + L+++L+      ++ LKL    +G  G + ++  L   Y ++    S L L
Sbjct: 487 PIGPEGAKALSEVLKFHG--KIKTLKLGWCQIGAKGAEFIADTLK--YNTTI---STLDL 539

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--LR 352
           +      N L +EGA  LA   K + + L  +++  N I   G  A++ A + N++  + 
Sbjct: 540 RA-----NGLRDEGAVCLARSMKVVNEALASLDLGFNEIRDEGAFAIAQALKANEDVAVT 594

Query: 353 HLNLNDNTITYKG 365
            LNL  N +T  G
Sbjct: 595 SLNLASNFLTKFG 607


>gi|303286081|ref|XP_003062330.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455847|gb|EEH53149.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 232

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 41/241 (17%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  +  +++ DN  G +G       + + C   L  L L ++G G  G    + AL D  
Sbjct: 21  GVPIARVNVRDNQVGVLGCRAFGRAV-ARCSTTLTRLDLAHSGFGDAG----AVALADGL 75

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKML--AAVFKKLKTLERVEMPQNGIY---HVGI 338
           ++++   +P ALKV   G N +   GAK L  A     +  L  +++  NG       G+
Sbjct: 76  KTTR---APCALKVLQLGFNSVGAVGAKALVEALTTGWMDALRHLDLACNGAADGERSGV 132

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
           +AL  A E+N +LR LN   N +T +                      C      A  +A
Sbjct: 133 SALMKALEKNDSLRVLNARGNDLTPR----------------------C------AGDVA 164

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L +N  L  +N+  N+I  +G  +L++A+   + L+ ++V  N+  +EG   +E L++
Sbjct: 165 EMLMENVALRRLNVGYNKIYDEGAWELMEALSENSTLRGLDVQRNEISDEGGRHVESLLR 224

Query: 459 S 459
           +
Sbjct: 225 A 225



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 5/142 (3%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTIT---YKGAIPLGQALSKLP 66
           L+ +++  N +  VG  AL +A        LRHL+L  N        G   L +AL K  
Sbjct: 84  LKVLQLGFNSVGAVGAKALVEALTTGWMDALRHLDLACNGAADGERSGVSALMKALEKND 143

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
           SL +LN     L    A  +A+ L +N  L  +N+  N+I  +G  +L++A+   + L+ 
Sbjct: 144 SLRVLNARGNDLTPRCAGDVAEMLMENVALRRLNVGYNKIYDEGAWELMEALSENSTLRG 203

Query: 127 INVSENQFGEEGVEEMEKLMKS 148
           ++V  N+  +EG   +E L+++
Sbjct: 204 LDVQRNEISDEGGRHVESLLRA 225



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%)

Query: 9   LKTLEHVEMPQNGIY---HVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           +  L H+++  NG       G++AL  A E+N  LR LN   N +T + A  + + L + 
Sbjct: 111 MDALRHLDLACNGAADGERSGVSALMKALEKNDSLRVLNARGNDLTPRCAGDVAEMLMEN 170

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            +L  LN+G   +   GA  + + L++N+TL  +++  NEIS +GG  +   ++    L 
Sbjct: 171 VALRRLNVGYNKIYDEGAWELMEALSENSTLRGLDVQRNEISDEGGRHVESLLRANATLT 230

Query: 126 QI 127
           ++
Sbjct: 231 EV 232



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 9/151 (5%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK---LRHLNLNDNTITYKGAIPLGQ 60
           AV +   TL  +++  +G    G  AL+D  +  +    L+ L L  N++   GA  L +
Sbjct: 45  AVARCSTTLTRLDLAHSGFGDAGAVALADGLKTTRAPCALKVLQLGFNSVGAVGAKALVE 104

Query: 61  ALSK--LPSLAILNL---GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
           AL+   + +L  L+L   G    + +G S++ K L  N +L  +N   N+++ +   D+ 
Sbjct: 105 ALTTGWMDALRHLDLACNGAADGERSGVSALMKALEKNDSLRVLNARGNDLTPRCAGDVA 164

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEE-MEKL 145
           + +     L+++NV  N+  +EG  E ME L
Sbjct: 165 EMLMENVALRRLNVGYNKIYDEGAWELMEAL 195


>gi|354481396|ref|XP_003502887.1| PREDICTED: leucine-rich repeat-containing protein LOC400891 homolog
           [Cricetulus griseus]
          Length = 398

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 12/238 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L +   +  LDL DN     G E LAD+L  +    + ++ L++N +G  G + +  AL 
Sbjct: 102 LTSNVYIKRLDLRDNGLCGAGAEALADVLCKN--NIISDVDLSDNQIGAAGLQAICAALA 159

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                     +P   K+ + G NRLE + A+ LAA+  +  +L+ +++  N +  +    
Sbjct: 160 L---------NPAVQKMQLGG-NRLEEKAAQHLAALLLRHTSLKSLDLSYNQLNDLAGET 209

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L  A  EN  L  LNL+ N +   GAI L + L     L +L++       +GA+S+ + 
Sbjct: 210 LGPALAENTGLTELNLSWNHLRGPGAIALAKGLEANIFLKVLDISHNGFGDSGAASVGEA 269

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L  N  LE++N+  N IS+ G L L   ++    L+ + +S+N    EG   + K ++
Sbjct: 270 LKANNVLEELNMRNNRISMTGALKLGLGLQVNQTLRILIISKNPIRSEGYVSLLKSVR 327



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 36/217 (16%)

Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNR-LENEGAKMLAAVFKKLKTLERVEMPQ 330
           C+ LS     C     ++GS   L +    R+R L  +GA+ LA++      ++R+++  
Sbjct: 63  CQALSVVPASCL---LRQGSASELNL----RHRGLGPQGARALASMLTSNVYIKRLDLRD 115

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG------AIPLGQALSKL-------- 376
           NG+   G  AL+D   +N  +  ++L+DN I   G      A+ L  A+ K+        
Sbjct: 116 NGLCGAGAEALADVLCKNNIISDVDLSDNQIGAAGLQAICAALALNPAVQKMQLGGNRLE 175

Query: 377 --------------PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
                          SL  L+L    L      ++   L +NT L ++NL+ N +   G 
Sbjct: 176 EKAAQHLAALLLRHTSLKSLDLSYNQLNDLAGETLGPALAENTGLTELNLSWNHLRGPGA 235

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           + L K ++    LK +++S N FG+ G   + + +K+
Sbjct: 236 IALAKGLEANIFLKVLDISHNGFGDSGAASVGEALKA 272



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 4/160 (2%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L+ +++  N +  +    L  A  EN  L  LNL+ N +   GAI L + L     L +
Sbjct: 191 SLKSLDLSYNQLNDLAGETLGPALAENTGLTELNLSWNHLRGPGAIALAKGLEANIFLKV 250

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L++       +GA+S+ + L  N  LE++N+  N IS+ G L L   ++    L+ + +S
Sbjct: 251 LDISHNGFGDSGAASVGEALKANNVLEELNMRNNRISMTGALKLGLGLQVNQTLRILIIS 310

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDE----GECSD 166
           +N    EG   + K +++   +A  +L+  E     EC D
Sbjct: 311 KNPIRSEGYVSLLKSVRNNRSSALELLDLSEIQMNRECDD 350



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 69/147 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V  K   +  V++  N I   G+ A+  A   N  ++ + L  N +  K A  L   
Sbjct: 126 LADVLCKNNIISDVDLSDNQIGAAGLQAICAALALNPAVQKMQLGGNRLEEKAAQHLAAL 185

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L+L    L      ++   L +NT L ++NL+ N +   G + L K ++  
Sbjct: 186 LLRHTSLKSLDLSYNQLNDLAGETLGPALAENTGLTELNLSWNHLRGPGAIALAKGLEAN 245

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
             LK +++S N FG+ G   + + +K+
Sbjct: 246 IFLKVLDISHNGFGDSGAASVGEALKA 272



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 72/143 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA++      ++ +++  NG+   G  AL+D   +N  +  ++L+DN I   G   +  A
Sbjct: 98  LASMLTSNVYIKRLDLRDNGLCGAGAEALADVLCKNNIISDVDLSDNQIGAAGLQAICAA 157

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+  P++  + LG   L+   A  +A  L  +T+L+ ++L+ N+++   G  L  A+   
Sbjct: 158 LALNPAVQKMQLGGNRLEEKAAQHLAALLLRHTSLKSLDLSYNQLNDLAGETLGPALAEN 217

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
           T L ++N+S N     G   + K
Sbjct: 218 TGLTELNLSWNHLRGPGAIALAK 240



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N L   GA  LA   +    L+ +++  NG    G  ++ +A + N  L  LN+ +N I+
Sbjct: 228 NHLRGPGAIALAKGLEANIFLKVLDISHNGFGDSGAASVGEALKANNVLEELNMRNNRIS 287

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
             GA+ LG  L    +L IL +    ++S G  S+ K + +N +
Sbjct: 288 MTGALKLGLGLQVNQTLRILIISKNPIRSEGYVSLLKSVRNNRS 331


>gi|320170762|gb|EFW47661.1| hypothetical protein CAOG_05599 [Capsaspora owczarzaki ATCC 30864]
          Length = 370

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 16/253 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L+++DL+ N  G  G + +A++LR +    +  L L NN LG  G   +++ L
Sbjct: 105 ALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTT--VTRLSLYNNKLGDAGATTIAEML 162

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L L       N++ + GA  +A   K   +L+ +++ +  I +    
Sbjct: 163 Q-----VNKILTSLGLDY-----NQIGDAGANAVAEALKVNTSLQALDLGK--IGNAAAQ 210

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            +++  + N  L HL+L    I    A  + +AL    +L  L+L    +  AGA +IA 
Sbjct: 211 TMAEVLQMNTTLTHLSLG--LIGDAEAQAIAEALKVNTTLTGLSLCCNQIGDAGAKTIAD 268

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  NTTL  + L  N+I   G   + +A+K  T+L  + +SEN+ G  G + + + +K 
Sbjct: 269 ALKVNTTLSRLWLKQNQIGNAGAQAIAEALKVNTRLTHLGLSENEIGNAGAQAIAEALKV 328

Query: 460 FGMAAALVLEDDE 472
                 L LE+++
Sbjct: 329 NSTLTRLFLENNQ 341



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 19/357 (5%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++  + N  +  LNL  N I   GA  + + L    ++  L L    +  AGA +IA+
Sbjct: 17  AIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAE 76

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L  NTT+ D+ L  N+I   G   L  A+K    L +I+++ NQ G+ G + + ++++ 
Sbjct: 77  TLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRV 136

Query: 149 FGMAAALVLEDDE-GECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNS 207
                 L L +++ G+       E  +      + G + N    D+  +  A     N S
Sbjct: 137 NTTVTRLSLYNNKLGDAGATTIAEMLQVNKILTSLGLDYN-QIGDAGANAVAEALKVNTS 195

Query: 208 NQSHNTSNQSHMSLKTGARLVELD--LSDNAFGPIG---VEGLADLLRSSCCFALEELKL 262
            Q+ +     + + +T A +++++  L+  + G IG    + +A+ L+ +    L  L L
Sbjct: 196 LQALDLGKIGNAAAQTMAEVLQMNTTLTHLSLGLIGDAEAQAIAEALKVNTT--LTGLSL 253

Query: 263 NNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
             N +G  G K ++ AL      S+     L LK     +N++ N GA+ +A   K    
Sbjct: 254 CCNQIGDAGAKTIADALKVNTTLSR-----LWLK-----QNQIGNAGAQAIAEALKVNTR 303

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
           L  + + +N I + G  A+++A + N  L  L L +N I   GA  + +A    P L
Sbjct: 304 LTHLGLSENEIGNAGAQAIAEALKVNSTLTRLFLENNQIGDAGAQAVAEAFKMNPKL 360



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 98/433 (22%), Positives = 169/433 (39%), Gaps = 103/433 (23%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +E + +  N I   G  A+++  + N  +  L L  N I   GA  + + L    ++  L
Sbjct: 28  VEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAETLRVNTTVTDL 87

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            L    +  AGA +++  L  N TL  ++L  N++   G   + + ++  T + ++++  
Sbjct: 88  GLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVTRLSLYN 147

Query: 132 NQFGEEG---VEEM---EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN 185
           N+ G+ G   + EM    K++ S G+              D  Q  ++     ++A   N
Sbjct: 148 NKLGDAGATTIAEMLQVNKILTSLGL--------------DYNQIGDAGANAVAEALKVN 193

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGL 245
           ++L   D     NA+ Q+     Q + T   +H+SL                G IG    
Sbjct: 194 TSLQALDLGKIGNAAAQTMAEVLQMNTT--LTHLSL----------------GLIG---- 231

Query: 246 ADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRL 305
                +      E LK+N    G++ C         C                    N++
Sbjct: 232 ----DAEAQAIAEALKVNTTLTGLSLC---------C--------------------NQI 258

Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
            + GAK +A   K   TL R+ + QN I + G  A+++A + N  L HL L++N I    
Sbjct: 259 GDAGAKTIADALKVNTTLSRLWLKQNQIGNAGAQAIAEALKVNTRLTHLGLSENEI---- 314

Query: 366 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 425
                                    +AGA +IA+ L  N+TL  + L  N+I   G   +
Sbjct: 315 ------------------------GNAGAQAIAEALKVNSTLTRLFLENNQIGDAGAQAV 350

Query: 426 VKAMKNKTKLKQI 438
            +A K   KL  I
Sbjct: 351 AEAFKMNPKLVDI 363



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 144/351 (41%), Gaps = 38/351 (10%)

Query: 4   AVFKKLK---TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           A+ + LK   T+  + + +N I   G  A+++    N  +  L L  N I   GA  L  
Sbjct: 45  AIAETLKLNMTVTELRLTKNQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSA 104

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  ++L    +  AGA +IA+ L  NTT+  ++L  N++   G   + + ++ 
Sbjct: 105 ALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVTRLSLYNNKLGDAGATTIAEMLQV 164

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
              L  + +  NQ G+ G   + + +K      AL    D G+  +      +E      
Sbjct: 165 NKILTSLGLDYNQIGDAGANAVAEALKVNTSLQAL----DLGKIGNAAAQTMAEVLQ--- 217

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
               N+ L+H       +A  Q+                +LK    L  L L  N  G  
Sbjct: 218 ---MNTTLTHLSLGLIGDAEAQAIAE-------------ALKVNTTLTGLSLCCNQIGDA 261

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G + +AD L+ +    L  L L  N +G  G + +++AL           + L L     
Sbjct: 262 GAKTIADALKVNTT--LSRLWLKQNQIGNAGAQAIAEALK-----VNTRLTHLGLS---- 310

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
             N + N GA+ +A   K   TL R+ +  N I   G  A+++AF+ N  L
Sbjct: 311 -ENEIGNAGAQAIAEALKVNSTLTRLFLENNQIGDAGAQAVAEAFKMNPKL 360



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 2/157 (1%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ + GA+ +A   +   T+  + + +N I   G  ALS A + NK L  ++LN N +
Sbjct: 63  KNQIGDAGARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQV 122

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + + L    ++  L+L +  L  AGA++IA+ L  N  L  + L  N+I   G
Sbjct: 123 GDAGAQAIAEMLRVNTTVTRLSLYNNKLGDAGATTIAEMLQVNKILTSLGLDYNQIGDAG 182

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              + +A+K  T L+ +++   + G    + M ++++
Sbjct: 183 ANAVAEALKVNTSLQALDLG--KIGNAAAQTMAEVLQ 217



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 75/158 (47%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           G N++ + GA+ +A   K   T+  + + +N I   G  A+++    N  +  L L  N 
Sbjct: 34  GWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAETLRVNTTVTDLGLWKNQ 93

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I   GA  L  AL    +L  ++L    +  AGA +IA+ L  NTT+  ++L  N++   
Sbjct: 94  IGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLRVNTTVTRLSLYNNKLGDA 153

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           G   + + ++    L  + +  NQ G+ G   + + +K
Sbjct: 154 GATTIAEMLQVNKILTSLGLDYNQIGDAGANAVAEALK 191



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 63/119 (52%)

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++  + N N+  LNL  N I   GA  + + L    ++  L L    +  AGA +IA+
Sbjct: 17  AIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDAGARAIAE 76

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  NTT+ D+ L  N+I   G   L  A+K    L +I+++ NQ G+ G + + ++++
Sbjct: 77  TLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQAIAEMLR 135



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 6/164 (3%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           +++  A+ +A   K    +E++ +  N I   G  A+++  + N  +  L L  N I   
Sbjct: 10  IDDADAQAIAEGLKGNPNVEKLNLGWNQIGDAGARAIAETLKLNMTVTELRLTKNQIGDA 69

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           GA  + + L    ++  L L    +  AGA +++  L  N TL  ++L  N++   G   
Sbjct: 70  GARAIAETLRVNTTVTDLGLWKNQIGDAGAHALSAALKVNKTLIKIDLNGNQVGDAGAQA 129

Query: 425 LVKAMKNKTKLKQINVSENQFGEEG---VEEM---EKLMKSFGM 462
           + + ++  T + ++++  N+ G+ G   + EM    K++ S G+
Sbjct: 130 IAEMLRVNTTVTRLSLYNNKLGDAGATTIAEMLQVNKILTSLGL 173



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 58/126 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +  N I   G   ++DA + N  L  L L  N I   GA  + +A
Sbjct: 238 IAEALKVNTTLTGLSLCCNQIGDAGAKTIADALKVNTTLSRLWLKQNQIGNAGAQAIAEA 297

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L L +  + +AGA +IA+ L  N+TL  + L  N+I   G   + +A K  
Sbjct: 298 LKVNTRLTHLGLSENEIGNAGAQAIAEALKVNSTLTRLFLENNQIGDAGAQAVAEAFKMN 357

Query: 122 TKLKQI 127
            KL  I
Sbjct: 358 PKLVDI 363


>gi|46446699|ref|YP_008064.1| hypothetical protein pc1065 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400340|emb|CAF23789.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1505

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 76/146 (52%)

Query: 304  RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
            R+ +EG +++A        L  +++  N I   G  A++ AF  N  L HL+L +N I+ 
Sbjct: 1337 RISDEGTEVIANGLAFNTALNILDLRNNQISDKGAKAIAQAFAFNTALWHLHLGNNQISD 1396

Query: 364  KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
            +GA  + QAL+   +L  ++L +  + ++GA ++A+ LT NT L  + L  N+IS  G  
Sbjct: 1397 EGAEAIAQALASNTALKTIDLSNNQISNSGAEALAQALTSNTALRILYLENNQISDSGAE 1456

Query: 424  DLVKAMKNKTKLKQINVSENQFGEEG 449
             L +A+ + T L       N   + G
Sbjct: 1457 ALAQALTSNTTLSTFYFYGNPLNKRG 1482



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 67/123 (54%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            G   +++    N  L  L+L +N I+ KGA  + QA +   +L  L+LG+  +   GA +
Sbjct: 1342 GTEVIANGLAFNTALNILDLRNNQISDKGAKAIAQAFAFNTALWHLHLGNNQISDEGAEA 1401

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            IA+ L  NT L+ ++L+ N+IS  G   L +A+ + T L+ + +  NQ  + G E + + 
Sbjct: 1402 IAQALASNTALKTIDLSNNQISNSGAEALAQALTSNTALRILYLENNQISDSGAEALAQA 1461

Query: 146  MKS 148
            + S
Sbjct: 1462 LTS 1464



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 67/123 (54%)

Query: 337  GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
            G   +++    N  L  L+L +N I+ KGA  + QA +   +L  L+LG+  +   GA +
Sbjct: 1342 GTEVIANGLAFNTALNILDLRNNQISDKGAKAIAQAFAFNTALWHLHLGNNQISDEGAEA 1401

Query: 397  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
            IA+ L  NT L+ ++L+ N+IS  G   L +A+ + T L+ + +  NQ  + G E + + 
Sbjct: 1402 IAQALASNTALKTIDLSNNQISNSGAEALAQALTSNTALRILYLENNQISDSGAEALAQA 1461

Query: 457  MKS 459
            + S
Sbjct: 1462 LTS 1464



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 70/134 (52%)

Query: 294  ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
            AL +     N++ ++GAK +A  F     L  + +  N I   G  A++ A   N  L+ 
Sbjct: 1355 ALNILDLRNNQISDKGAKAIAQAFAFNTALWHLHLGNNQISDEGAEAIAQALASNTALKT 1414

Query: 354  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
            ++L++N I+  GA  L QAL+   +L IL L +  +  +GA ++A+ LT NTTL      
Sbjct: 1415 IDLSNNQISNSGAEALAQALTSNTALRILYLENNQISDSGAEALAQALTSNTTLSTFYFY 1474

Query: 414  CNEISVQGGLDLVK 427
             N ++ +G L L +
Sbjct: 1475 GNPLNKRGRLALAE 1488



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 305  LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
            LE    ++++   +++KTLE        I H+ +  L   +  N NL  LN  D  I+ +
Sbjct: 1293 LETIKKEVVSKTLREIKTLE--------IDHIRLFKL---YMNNSNLTILNFFDKRISDE 1341

Query: 365  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
            G   +   L+   +L IL+L +  +   GA +IA+    NT L  ++L  N+IS +G   
Sbjct: 1342 GTEVIANGLAFNTALNILDLRNNQISDKGAKAIAQAFAFNTALWHLHLGNNQISDEGAEA 1401

Query: 425  LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            + +A+ + T LK I++S NQ    G E + + + S      L LE+++
Sbjct: 1402 IAQALASNTALKTIDLSNNQISNSGAEALAQALTSNTALRILYLENNQ 1449



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 67/127 (52%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            L  +++  N I   G  A++ AF  N  L HL+L +N I+ +GA  + QAL+   +L  +
Sbjct: 1356 LNILDLRNNQISDKGAKAIAQAFAFNTALWHLHLGNNQISDEGAEAIAQALASNTALKTI 1415

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L +  + ++GA ++A+ LT NT L  + L  N+IS  G   L +A+ + T L       
Sbjct: 1416 DLSNNQISNSGAEALAQALTSNTALRILYLENNQISDSGAEALAQALTSNTTLSTFYFYG 1475

Query: 132  NQFGEEG 138
            N   + G
Sbjct: 1476 NPLNKRG 1482



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 11/161 (6%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +++   +++KTLE        I H+ +  L   +  N  L  LN  D  I+ +G   +  
Sbjct: 1300 VVSKTLREIKTLE--------IDHIRLFKL---YMNNSNLTILNFFDKRISDEGTEVIAN 1348

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             L+   +L IL+L +  +   GA +IA+    NT L  ++L  N+IS +G   + +A+ +
Sbjct: 1349 GLAFNTALNILDLRNNQISDKGAKAIAQAFAFNTALWHLHLGNNQISDEGAEAIAQALAS 1408

Query: 121  KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             T LK I++S NQ    G E + + + S      L LE+++
Sbjct: 1409 NTALKTIDLSNNQISNSGAEALAQALTSNTALRILYLENNQ 1449



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 60/115 (52%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A  F     L H+ +  N I   G  A++ A   N  L+ ++L++N I+  GA  L QA
Sbjct: 1374 IAQAFAFNTALWHLHLGNNQISDEGAEAIAQALASNTALKTIDLSNNQISNSGAEALAQA 1433

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
            L+   +L IL L +  +  +GA ++A+ LT NTTL       N ++ +G L L +
Sbjct: 1434 LTSNTALRILYLENNQISDSGAEALAQALTSNTTLSTFYFYGNPLNKRGRLALAE 1488



 Score = 42.4 bits (98), Expect = 0.50,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 12/142 (8%)

Query: 230  LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
            LDL +N     G + +A     +   AL  L L NN +   G + +++AL          
Sbjct: 1359 LDLRNNQISDKGAKAIAQAFAFNT--ALWHLHLGNNQISDEGAEAIAQAL---------- 1406

Query: 290  GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
             S  ALK      N++ N GA+ LA        L  + +  N I   G  AL+ A   N 
Sbjct: 1407 ASNTALKTIDLSNNQISNSGAEALAQALTSNTALRILYLENNQISDSGAEALAQALTSNT 1466

Query: 350  NLRHLNLNDNTITYKGAIPLGQ 371
             L       N +  +G + L +
Sbjct: 1467 TLSTFYFYGNPLNKRGRLALAE 1488


>gi|326432234|gb|EGD77804.1| hypothetical protein PTSG_08894 [Salpingoeca sp. ATCC 50818]
          Length = 575

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 41/271 (15%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRS-----------------------SCCFALEELKLN 263
           LV L LSDN  G IG   LA  LR                          C ++  LK++
Sbjct: 195 LVTLSLSDNELGDIGATTLASHLRKMPDLQHLGLDNVAMSSTGLHTIMKACPSVATLKIS 254

Query: 264 NNGLGITGCKLLSKALHDCYESSKKEGSPL-----------------ALKVFIAGRNRLE 306
           +N +     K L++A+  C    + + + L                  L+V     NR+ 
Sbjct: 255 DNDIDAALTKPLAEAMQVCLRHLELKSTDLDANDLMPAINTLKSRGCVLEVLRLWDNRVS 314

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           + G   +A   K+  +L+ +++  N I   G  +L+ A E+N  L  L+L  N I  +G 
Sbjct: 315 DHGVAAIAQSLKENASLKVLDLRFNNISSHGARSLASALEKNTTLHTLSLKFNRIGNRGC 374

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             L   L+K  SL  L+L D  +   GA S+A+ L  NT++ ++NL  N++S +   D  
Sbjct: 375 KHLAGMLAKNSSLHTLDLEDNEIGDDGAVSLARGLERNTSVRELNLRYNKVSDKALADFG 434

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           K ++N   L  +++S       G+  M+ LM
Sbjct: 435 KCLENNRALAVLDLSSKPHVVGGI-TMDGLM 464



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 4/148 (2%)

Query: 2   LAAVFKKLK---TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
           +AA+ + LK   +L+ +++  N I   G  +L+ A E+N  L  L+L  N I  +G   L
Sbjct: 318 VAAIAQSLKENASLKVLDLRFNNISSHGARSLASALEKNTTLHTLSLKFNRIGNRGCKHL 377

Query: 59  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
              L+K  SL  L+L D  +   GA S+A+ L  NT++ ++NL  N++S +   D  K +
Sbjct: 378 AGMLAKNSSLHTLDLEDNEIGDDGAVSLARGLERNTSVRELNLRYNKVSDKALADFGKCL 437

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLM 146
           +N   L  +++S       G+  M+ LM
Sbjct: 438 ENNRALAVLDLSSKPHVVGGI-TMDGLM 464


>gi|359473416|ref|XP_002266381.2| PREDICTED: protein NLRC3-like [Vitis vinifera]
          Length = 684

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 179/417 (42%), Gaps = 64/417 (15%)

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           N GD      G   +A+ L  N   E+V+   N I+  G       +++   LK +++S 
Sbjct: 260 NFGD-----EGLFFLAESLAYNQNAEEVSFAANGITAAGLKAFDGVLQSNIVLKTLDLSG 314

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
           N  G+EG + +             +L D+ G    ++    S +  D  A+     L  N
Sbjct: 315 NPIGDEGAKCLCD-----------ILIDNAG---IQKLQLNSADLGDEGAKAIAEMLKKN 360

Query: 192 DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVE------LDLSDNAFGPIGVEGL 245
            S      +N   N  + S  TS         G  L+E      + L+ N  G +GV  L
Sbjct: 361 SSLRIVELNN---NMIDYSGFTS--------LGGALLENNTIRNIHLNGNYGGALGVAAL 409

Query: 246 ADLLRSSCCFALEELKLNNNGLGITGCKLL----------------------SKALHDCY 283
           A  L ++   +L EL L+ N +G  G ++L                      S+      
Sbjct: 410 AKGLEANK--SLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVA 467

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
           E  KK  S L L +++   N + +EGA+ +A   K+ +++  +++  N I+  G++ ++ 
Sbjct: 468 EYIKKAKSLLWLNLYM---NDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIAG 524

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             ++N  +  L L  N I  +GA  L + L     +  L LG C + + GA  IA  L  
Sbjct: 525 VLKDNTVITTLELGYNPIGPEGAKALSEVLKFHGKIKTLKLGWCQIGAKGAEFIADTLKY 584

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 459
           NTT+  ++L  N +  +G + L ++MK   + L  +++  N+  +EG   + + +K+
Sbjct: 585 NTTISTLDLRANGLRDEGAVCLARSMKVVNEALASLDLGFNEIRDEGAFAIAQALKA 641



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 47/275 (17%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS++ LKT      LDLS N  G  G + L D+L  +    +++L+LN+  LG  G K +
Sbjct: 302 QSNIVLKT------LDLSGNPIGDEGAKCLCDILIDNA--GIQKLQLNSADLGDEGAKAI 353

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           ++ L       KK  S   L++     N ++  G   L     +  T+  + +  N    
Sbjct: 354 AEML-------KKNSS---LRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGA 403

Query: 336 VGITALSDAFEENKNLRHLNLNDNTI-----------------------------TYKGA 366
           +G+ AL+   E NK+LR L+L+ N+I                             + +GA
Sbjct: 404 LGVAALAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGA 463

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + + + K  SL  LNL    +   GA  IA  L +N ++  ++L  N I  +G   + 
Sbjct: 464 FHVAEYIKKAKSLLWLNLYMNDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIA 523

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             +K+ T +  + +  N  G EG + + +++K  G
Sbjct: 524 GVLKDNTVITTLELGYNPIGPEGAKALSEVLKFHG 558



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 164/404 (40%), Gaps = 38/404 (9%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E V    NGI   G+ A     + N  L+ L+L+ N I  +GA  L   L     +  L 
Sbjct: 280 EEVSFAANGITAAGLKAFDGVLQSNIVLKTLDLSGNPIGDEGAKCLCDILIDNAGIQKLQ 339

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    L   GA +IA+ L  N++L  V L  N I   G   L  A+     ++ I+++ N
Sbjct: 340 LNSADLGDEGAKAIAEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGN 399

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
             G  GV  + K +              E   S  E         D       S LS   
Sbjct: 400 YGGALGVAALAKGL--------------EANKSLRELHLHGNSIGDEGVRVLMSGLS--- 442

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGVEGLADLLR 250
              SH       +  N   ++    H++  +K    L+ L+L  N  G  G E +AD L+
Sbjct: 443 ---SHKGKLTLLDIGNNEISSRGAFHVAEYIKKAKSLLWLNLYMNDIGDEGAEKIADALK 499

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            +   A   + L  N +   G   ++  L D    +  E           G N +  EGA
Sbjct: 500 ENRSIA--TIDLGGNNIHAKGVSKIAGVLKDNTVITTLE----------LGYNPIGPEGA 547

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           K L+ V K    ++ +++    I   G   ++D  + N  +  L+L  N +  +GA+ L 
Sbjct: 548 KALSEVLKFHGKIKTLKLGWCQIGAKGAEFIADTLKYNTTISTLDLRANGLRDEGAVCLA 607

Query: 371 QALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           +++  +  +LA L+LG   ++  GA +IA+ L  N   EDV +T
Sbjct: 608 RSMKVVNEALASLDLGFNEIRDEGAFAIAQALKAN---EDVAVT 648



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 126/292 (43%), Gaps = 22/292 (7%)

Query: 2   LAAVFKKL---KTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIP 57
           +AA+ K L   K+L  + +  N I   G+  L      +K KL  L++ +N I+ +GA  
Sbjct: 406 VAALAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFH 465

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           + + + K  SL  LNL    +   GA  IA  L +N ++  ++L  N I  +G   +   
Sbjct: 466 VAEYIKKAKSLLWLNLYMNDIGDEGAEKIADALKENRSIATIDLGGNNIHAKGVSKIAGV 525

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           +K+ T +  + +  N  G EG + + +++K  G    L L    G C    Q      E 
Sbjct: 526 LKDNTVITTLELGYNPIGPEGAKALSEVLKFHGKIKTLKL----GWC----QIGAKGAEF 577

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
            +D    N+ +S  D   ++   ++      +S    N++         L  LDL  N  
Sbjct: 578 IADTLKYNTTISTLDL-RANGLRDEGAVCLARSMKVVNEA---------LASLDLGFNEI 627

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
              G   +A  L+++   A+  L L +N L   G   L+ A    YE S+KE
Sbjct: 628 RDEGAFAIAQALKANEDVAVTSLNLASNFLTKFGQSALTDARDHVYEMSEKE 679



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 160/381 (41%), Gaps = 73/381 (19%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A+++  ++N  LR + LN+N I Y G   LG AL +  ++  ++L      + G ++
Sbjct: 349 GAKAIAEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGNYGGALGVAA 408

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEG---VEE 141
           +AK L  N +L +++L  N I  +G   L+  +  +K KL  +++  N+    G   V E
Sbjct: 409 LAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSHKGKLTLLDIGNNEISSRGAFHVAE 468

Query: 142 MEKLMKSFGMAAALVLED--DEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNA 199
             K  KS  +   L + D  DEG     E+  ++ +EN S                    
Sbjct: 469 YIKKAKSL-LWLNLYMNDIGDEG----AEKIADALKENRS-------------------- 503

Query: 200 SNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEE 259
                                      +  +DL  N     GV  +A +L+ +    +  
Sbjct: 504 ---------------------------IATIDLGGNNIHAKGVSKIAGVLKDNTV--ITT 534

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L+L  N +G  G K LS+ L       K  G    LK+   G  ++  +GA+ +A   K 
Sbjct: 535 LELGYNPIGPEGAKALSEVL-------KFHGKIKTLKL---GWCQIGAKGAEFIADTLKY 584

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFE-ENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
             T+  +++  NG+   G   L+ + +  N+ L  L+L  N I  +GA  + QAL     
Sbjct: 585 NTTISTLDLRANGLRDEGAVCLARSMKVVNEALASLDLGFNEIRDEGAFAIAQALKANED 644

Query: 379 LAI--LNLGDCLLKSAGASSI 397
           +A+  LNL    L   G S++
Sbjct: 645 VAVTSLNLASNFLTKFGQSAL 665



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 162/373 (43%), Gaps = 73/373 (19%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + KK  +L  VE+  N I + G T+L  A  EN  +R+++LN N   Y GA+     
Sbjct: 353 IAEMLKKNSSLRIVELNNNMIDYSGFTSLGGALLENNTIRNIHLNGN---YGGAL----- 404

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN 120
                               G +++AK L  N +L +++L  N I  +G   L+  +  +
Sbjct: 405 --------------------GVAALAKGLEANKSLRELHLHGNSIGDEGVRVLMSGLSSH 444

Query: 121 KTKLKQINVSENQFGEEG---VEEMEKLMKSFGMAAALVLED--DEGECSDEEQDEESEE 175
           K KL  +++  N+    G   V E  K  KS  +   L + D  DEG     E+  ++ +
Sbjct: 445 KGKLTLLDIGNNEISSRGAFHVAEYIKKAKSL-LWLNLYMNDIGDEG----AEKIADALK 499

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
           EN S A  D   L  N+  H+   S  +                 LK    +  L+L  N
Sbjct: 500 ENRSIATID---LGGNNI-HAKGVSKIAG---------------VLKDNTVITTLELGYN 540

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
             GP G + L+++L+      ++ LKL    +G  G + ++  L   Y ++    S L L
Sbjct: 541 PIGPEGAKALSEVLKFHG--KIKTLKLGWCQIGAKGAEFIADTLK--YNTTI---STLDL 593

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKN--LR 352
           +      N L +EGA  LA   K + + L  +++  N I   G  A++ A + N++  + 
Sbjct: 594 RA-----NGLRDEGAVCLARSMKVVNEALASLDLGFNEIRDEGAFAIAQALKANEDVAVT 648

Query: 353 HLNLNDNTITYKG 365
            LNL  N +T  G
Sbjct: 649 SLNLASNFLTKFG 661


>gi|146089485|ref|XP_001470396.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|398016901|ref|XP_003861638.1| hypothetical protein, conserved [Leishmania donovani]
 gi|134070429|emb|CAM68769.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322499865|emb|CBZ34938.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 429

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 42/270 (15%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L  LDLS N  GP G E LA +LR+S   AL  L+L+ N LG TG      A+
Sbjct: 133 ALERNTYLSSLDLSVNELGPSGAECLAGILRNSVS-ALRVLQLHGNYLGPTGVI----AI 187

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI- 338
            D   ++K+      L+    G N   +E A  +AA+ +   TLE +++  N +   G+ 
Sbjct: 188 CDAVRTNKE------LRRLTLGNNHATDEAAGAVAAMLEANDTLEELDIRLNTLTANGVR 241

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS--KLPSLAILNLGDCLLKSAGASS 396
           T +     +N +L  L+L+ N +   GA  L Q L+  +   L  L+L  C L ++G + 
Sbjct: 242 TIVQQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLSSCGLTASGGAR 301

Query: 397 IAKYL----------------------------TDNTTLEDVNLTCNEISVQGGLDLVKA 428
           +A  L                            TD  T+  V+++CN+I  +G   L+ A
Sbjct: 302 VASLLSTSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQLIDA 361

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
                +L  +  + N       + ++ L++
Sbjct: 362 ALRNAQLVALVTNGNNISRAAQKRLDNLLE 391



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 23/250 (9%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH--------- 280
           +DL DN  GP G   +A  L SS    + E+ +  N +G  GC  L+  ++         
Sbjct: 32  IDLMDNQLGPTGAVKIASCLESS---PVTEVFICYNDIGKEGCDGLAGVVNLSHSLQVLD 88

Query: 281 ---------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
                    D +   +      AL       NRL  EGA + A   ++   L  +++  N
Sbjct: 89  IRGNHLSASDVHRLLRSVSMSTALSRLGLASNRLGPEGAALAAKALERNTYLSSLDLSVN 148

Query: 332 GIYHVGITALSDAFEENKN-LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
            +   G   L+     + + LR L L+ N +   G I +  A+     L  L LG+    
Sbjct: 149 ELGPSGAECLAGILRNSVSALRVLQLHGNYLGPTGVIAICDAVRTNKELRRLTLGNNHAT 208

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAMKNKTKLKQINVSENQFGEEG 449
              A ++A  L  N TLE++++  N ++  G   +V + +   T L  +++S N+ G  G
Sbjct: 209 DEAAGAVAAMLEANDTLEELDIRLNTLTANGVRTIVQQGLAKNTSLAVLSLSGNEVGPVG 268

Query: 450 VEEMEKLMKS 459
             E+ +++ S
Sbjct: 269 ANELTQVLTS 278



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 137/346 (39%), Gaps = 33/346 (9%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G   L+     +  L+ L++  N ++      L +++S   +L+ L L    L 
Sbjct: 64  NDIGKEGCDGLAGVVNLSHSLQVLDIRGNHLSASDVHRLLRSVSMSTALSRLGLASNRLG 123

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEG 138
             GA+  AK L  NT L  ++L+ NE+   G   L   ++N  + L+ + +  N  G  G
Sbjct: 124 PEGAALAAKALERNTYLSSLDLSVNELGPSGAECLAGILRNSVSALRVLQLHGNYLGPTG 183

Query: 139 VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESE--EENDSDAEGDNSNLSHNDSNHS 196
           V  +   +++      L L ++    +DE     +   E ND+  E D            
Sbjct: 184 VIAICDAVRTNKELRRLTLGNNHA--TDEAAGAVAAMLEANDTLEELD------------ 229

Query: 197 HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
                    N+  ++         L     L  L LS N  GP+G   L  +L S     
Sbjct: 230 ------IRLNTLTANGVRTIVQQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSV 283

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           LE+L L++ GL  +G   ++  L           + ++LK      N L++E A  LA  
Sbjct: 284 LEQLDLSSCGLTASGGARVASLL----------STSMSLKEINLSDNALDDEAAVRLAQN 333

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
                T+  V++  N I   G + L DA   N  L  L  N N I+
Sbjct: 334 ITDGITISVVDVSCNKIGEEGASQLIDAALRNAQLVALVTNGNNIS 379



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 2/144 (1%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK--LRHLNLNDNTITYKGAIPLGQALS 63
             K  +L  + +  N +  VG   L+     +++  L  L+L+   +T  G   +   LS
Sbjct: 248 LAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEQLDLSSCGLTASGGARVASLLS 307

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
              SL  +NL D  L    A  +A+ +TD  T+  V+++CN+I  +G   L+ A     +
Sbjct: 308 TSMSLKEINLSDNALDDEAAVRLAQNITDGITISVVDVSCNKIGEEGASQLIDAALRNAQ 367

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L  +  + N       + ++ L++
Sbjct: 368 LVALVTNGNNISRAAQKRLDNLLE 391



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 30/149 (20%)

Query: 2   LAAVFK-KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA + +  +  L  +++  N +   G+ A+ DA   NK+LR L L +N  T + A     
Sbjct: 158 LAGILRNSVSALRVLQLHGNYLGPTGVIAICDAVRTNKELRRLTLGNNHATDEAA----- 212

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAMK 119
                                   ++A  L  N TLE++++  N ++  G   +V + + 
Sbjct: 213 -----------------------GAVAAMLEANDTLEELDIRLNTLTANGVRTIVQQGLA 249

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKS 148
             T L  +++S N+ G  G  E+ +++ S
Sbjct: 250 KNTSLAVLSLSGNEVGPVGANELTQVLTS 278


>gi|290987620|ref|XP_002676520.1| predicted protein [Naegleria gruberi]
 gi|284090123|gb|EFC43776.1| predicted protein [Naegleria gruberi]
          Length = 270

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 15/248 (6%)

Query: 212 NTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS-CCFALEELKLNNNGLGIT 270
           N  +Q+   +K+G    +LDL +       +  L+DLLR++  C+AL  LK NN      
Sbjct: 3   NKLSQAEKLIKSGQN-CDLDLDEKEINNKELAQLSDLLRNNNTCYALH-LKANN--FDEK 58

Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
           G + L +AL           +   LK      NR+ + G K LA   K++  L  ++M  
Sbjct: 59  GLEALGEALQ----------TNRFLKRLYLNNNRIGDVGCKHLADAIKRVTALGMIDMSM 108

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           +GI   G   L  +   N ++  + L DNTI  +G   L + L     L +L++    + 
Sbjct: 109 SGIGTQGAKFLGVSLVLNNSIHTIYLTDNTIGAEGTKALAEGLKDNKKLKVLDISRNDIG 168

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           + GA ++A+ L  N+ LE + +  N I   G + L +A+     ++ +N+  N  G++G 
Sbjct: 169 NDGAVALAEMLKVNSVLEQLYIVKNNIGTTGSIALAEALVVNKGMRSLNMDFNPIGDDGA 228

Query: 451 EEMEKLMK 458
               K+++
Sbjct: 229 TPFMKVLR 236



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 22/230 (9%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L L  N F   G+E L + L+++    L+ L LNNN +G  GCK L+ A+          
Sbjct: 48  LHLKANNFDEKGLEALGEALQTNRF--LKRLYLNNNRIGDVGCKHLADAIKRVT------ 99

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
               AL +     + +  +GAK L        ++  + +  N I   G  AL++  ++NK
Sbjct: 100 ----ALGMIDMSMSGIGTQGAKFLGVSLVLNNSIHTIYLTDNTIGAEGTKALAEGLKDNK 155

Query: 350 NLRHLNLNDNTITYKGAIPLGQAL---SKLPSLAIL--NLGDCLLKSAGASSIAKYLTDN 404
            L+ L+++ N I   GA+ L + L   S L  L I+  N+G     + G+ ++A+ L  N
Sbjct: 156 KLKVLDISRNDIGNDGAVALAEMLKVNSVLEQLYIVKNNIG-----TTGSIALAEALVVN 210

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
             +  +N+  N I   G    +K ++   K+++I   +    E+   E  
Sbjct: 211 KGMRSLNMDFNPIGDDGATPFMKVLRENDKIEKIEFDDKSISEDWKNEFR 260



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 70/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K++  L  ++M  +GI   G   L  +   N  +  + L DNTI  +G   L + 
Sbjct: 91  LADAIKRVTALGMIDMSMSGIGTQGAKFLGVSLVLNNSIHTIYLTDNTIGAEGTKALAEG 150

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L +L++    + + GA ++A+ L  N+ LE + +  N I   G + L +A+   
Sbjct: 151 LKDNKKLKVLDISRNDIGNDGAVALAEMLKVNSVLEQLYIVKNNIGTTGSIALAEALVVN 210

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             ++ +N+  N  G++G     K+++
Sbjct: 211 KGMRSLNMDFNPIGDDGATPFMKVLR 236



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 9/148 (6%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           + L+ + +  N I  VG   L+DA +    L  ++++ + I  +GA  LG +L    S+ 
Sbjct: 71  RFLKRLYLNNNRIGDVGCKHLADAIKRVTALGMIDMSMSGIGTQGAKFLGVSLVLNNSIH 130

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            + L D  + + G  ++A+ L DN  L+ ++++ N+I   G + L + +K  + L+Q+ +
Sbjct: 131 TIYLTDNTIGAEGTKALAEGLKDNKKLKVLDISRNDIGNDGAVALAEMLKVNSVLEQLYI 190

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVL 157
            +N  G  G         S  +A ALV+
Sbjct: 191 VKNNIGTTG---------SIALAEALVV 209



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL---SKLPS 67
           ++  + +  N I   G  AL++  ++NKKL+ L+++ N I   GA+ L + L   S L  
Sbjct: 128 SIHTIYLTDNTIGAEGTKALAEGLKDNKKLKVLDISRNDIGNDGAVALAEMLKVNSVLEQ 187

Query: 68  LAIL--NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
           L I+  N+G     + G+ ++A+ L  N  +  +N+  N I   G    +K ++   K++
Sbjct: 188 LYIVKNNIG-----TTGSIALAEALVVNKGMRSLNMDFNPIGDDGATPFMKVLRENDKIE 242

Query: 126 QINVSENQFGEEGVEEME 143
           +I   +    E+   E  
Sbjct: 243 KIEFDDKSISEDWKNEFR 260


>gi|403288303|ref|XP_003935347.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform 1
            [Saimiri boliviensis boliviensis]
          Length = 1028

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 14/250 (5%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 775  SHECCFDISLVLSSSQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLKKLWL 826

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S     C + +    +  +L     G N L + G ++L    K  +  L+++ +
Sbjct: 827  VSCCLTSAC---CQDLASVLSTNHSLTRLYMGENALGDAGVEILCEKAKNPQCHLQKLGL 883

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA-IPLGQALSKLPSLAILNLGDC 387
              +G+   G +ALS     N NL HL L  N +  KG  +  G  L     L +L L +C
Sbjct: 884  VNSGLTSAGCSALSAVLSTNGNLTHLYLRGNALGDKGIKLLCGGLLHPDCKLQVLELDNC 943

Query: 388  LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFG 446
             L S     ++  LT + +L  ++L  N++   G +   + +K ++  L+ + + E  F 
Sbjct: 944  SLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCALQSLGLCEMFFN 1003

Query: 447  EEGVEEMEKL 456
             E    +E L
Sbjct: 1004 YETKRALETL 1013


>gi|399497902|emb|CCG20279.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 123/292 (42%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+        + A+ +  
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEA----ANAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE       G+   G + L +
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 441 LIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|320162653|gb|EFW39552.1| hypothetical protein CAOG_00077 [Capsaspora owczarzaki ATCC 30864]
          Length = 398

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 84/157 (53%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           R ++ + GA+ +A   K+ + + ++ + +N I HVG  A+++A   N  L  L+LN N  
Sbjct: 24  REQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSLNANHT 83

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +AL     L  L LGD  +  AG  +IA+ L  N TL  ++L  N+I   G
Sbjct: 84  GDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLERNQIGNDG 143

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              L +A++  T + ++++ +NQ G+ G   + + +K
Sbjct: 144 AQSLAEALRVNTTVTRLDLEQNQIGDAGARALAEALK 180



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
           +N I HVG  A+++A   N  L  L+LN N     GA  + +AL     L  L LGD  +
Sbjct: 52  ENRIGHVGTLAIAEAIRVNTTLTQLSLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQI 111

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             AG  +IA+ L  N TL  ++L  N+I   G   L +A++  T + ++++ +NQ G+ G
Sbjct: 112 GDAGTRAIAEALKVNKTLTSLSLERNQIGNDGAQSLAEALRVNTTVTRLDLEQNQIGDAG 171

Query: 139 VEEMEKLMK 147
              + + +K
Sbjct: 172 ARALAEALK 180



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK   ++V+L L +N  G +G   +A+ +R +    L +L LN N  G  G + +++AL
Sbjct: 38  ALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTT--LTQLSLNANHTGDLGARAIAEAL 95

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      +    K+F+ G N++ + G + +A   K  KTL  + + +N I + G  
Sbjct: 96  ---------VVNKFLQKLFL-GDNQIGDAGTRAIAEALKVNKTLTSLSLERNQIGNDGAQ 145

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           +L++A   N  +  L+L  N I   GA  L +AL +  +L +L L    +  AG  ++  
Sbjct: 146 SLAEALRVNTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELNHNAIGDAGMEAVYD 205

Query: 400 YLTDNTTLEDVNLTCNEIS 418
               N T+ED      +IS
Sbjct: 206 AWDVNATVEDTRFENPQIS 224



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 10/194 (5%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L    +G  G + +++AL +  +  K           I G NR+ + G   +A   + 
Sbjct: 20  LSLWREQIGDAGAETIAEALKENQKVVK----------LILGENRIGHVGTLAIAEAIRV 69

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             TL ++ +  N    +G  A+++A   NK L+ L L DN I   G   + +AL    +L
Sbjct: 70  NTTLTQLSLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTL 129

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
             L+L    + + GA S+A+ L  NTT+  ++L  N+I   G   L +A+K  T L  + 
Sbjct: 130 TSLSLERNQIGNDGAQSLAEALRVNTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLE 189

Query: 440 VSENQFGEEGVEEM 453
           ++ N  G+ G+E +
Sbjct: 190 LNHNAIGDAGMEAV 203



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 68/132 (51%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + +  N    +G  A+++A   NK L+ L L DN I   G   + +AL    +L  
Sbjct: 72  TLTQLSLNANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTS 131

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    + + GA S+A+ L  NTT+  ++L  N+I   G   L +A+K  T L  + ++
Sbjct: 132 LSLERNQIGNDGAQSLAEALRVNTTVTRLDLEQNQIGDAGARALAEALKENTTLTLLELN 191

Query: 131 ENQFGEEGVEEM 142
            N  G+ G+E +
Sbjct: 192 HNAIGDAGMEAV 203



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 68/136 (50%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G   +++A +EN+K+  L L +N I + G + + +A+    +L  L+L        GA +
Sbjct: 31  GAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSLNANHTGDLGARA 90

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA+ L  N  L+ + L  N+I   G   + +A+K    L  +++  NQ G +G + + + 
Sbjct: 91  IAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLERNQIGNDGAQSLAEA 150

Query: 146 MKSFGMAAALVLEDDE 161
           ++       L LE ++
Sbjct: 151 LRVNTTVTRLDLEQNQ 166



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 103/265 (38%), Gaps = 62/265 (23%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L+L    I   GA  + +AL +   +  L LG+  +   G  +IA+ +  NTTL  ++L 
Sbjct: 20  LSLWREQIGDAGAETIAEALKENQKVVKLILGENRIGHVGTLAIAEAIRVNTTLTQLSLN 79

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEG 162
            N     G   + +A+     L+++ + +NQ G+ G   + + +K      +L LE    
Sbjct: 80  ANHTGDLGARAIAEALVVNKFLQKLFLGDNQIGDAGTRAIAEALKVNKTLTSLSLE---- 135

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLK 222
                                                 NQ  N+  QS         +L+
Sbjct: 136 -------------------------------------RNQIGNDGAQSLAE------ALR 152

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
               +  LDL  N  G  G   LA+ L+ +    L  L+LN+N +G  G     +A++D 
Sbjct: 153 VNTTVTRLDLEQNQIGDAGARALAEALKENTTLTL--LELNHNAIGDAGM----EAVYDA 206

Query: 283 Y------ESSKKEG---SPLALKVF 298
           +      E ++ E    SPLAL + 
Sbjct: 207 WDVNATVEDTRFENPQISPLALAMI 231



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + + +N I + G  +L++A   N  +  L+L  N I   GA  L +A
Sbjct: 119 IAEALKVNKTLTSLSLERNQIGNDGAQSLAEALRVNTTVTRLDLEQNQIGDAGARALAEA 178

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 107
           L +  +L +L L    +  AG  ++      N T+ED      +IS
Sbjct: 179 LKENTTLTLLELNHNAIGDAGMEAVYDAWDVNATVEDTRFENPQIS 224


>gi|156355179|ref|XP_001623550.1| predicted protein [Nematostella vectensis]
 gi|156210262|gb|EDO31450.1| predicted protein [Nematostella vectensis]
          Length = 348

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 149/343 (43%), Gaps = 39/343 (11%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A ++    N+ L+ L L  N I  +GAI +  AL     L  L+L    +   GA +IA 
Sbjct: 30  AFAEMLSHNQVLKELCLEGN-IEVEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIAS 88

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            L  N+TLE+++L CN I  +G + +  A+K  + L+ +N+ EN  G+E +  + K +K+
Sbjct: 89  ALKTNSTLENLDLRCNNIGDEGAIAMANALKTNSTLENLNLQENNIGDEVLSSIIKTLKT 148

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHN-----ASNQS 203
                   L+      S +  D  SE          N  + H      H      AS Q 
Sbjct: 149 NTSITTFNLDLQSKTSSADLADLLSE----------NKTIEHLRIYDLHGSIAAIASTQM 198

Query: 204 HNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF-------GPIGVEG---LADLLRSSC 253
            N S ++      + +S +  A   E+ LS N         G I VEG   +A  L++  
Sbjct: 199 KNPSLKALRIRCPNEVSSEDAAAFAEM-LSHNQVLRKLRLEGNIEVEGAIAIASALKTKS 257

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
              L +L L +N +G  G   ++ AL       K     L L+      N + +EGA  +
Sbjct: 258 V--LRKLSLYSNNIGDKGAIAIASALKTNSTLEK-----LDLRC-----NNIGDEGAIAM 305

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           A   K   TLE + +  N I   G  ++++A + N  LR L+L
Sbjct: 306 ANALKTNSTLENLNLQGNNIGDEGTISMANALKTNSTLRSLDL 348



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 113/261 (43%), Gaps = 31/261 (11%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LKT + L  LDL  N  G  G   +A+ L+++    LE L L  N +G      + K L
Sbjct: 89  ALKTNSTLENLDLRCNNIGDEGAIAMANALKTNS--TLENLNLQENNIGDEVLSSIIKTL 146

Query: 280 HDCYE--------SSKKEGSPLA-----------LKVFIAGRNRLENEGAKMLAAVFK-- 318
                         SK   + LA           L+++      L    A + +   K  
Sbjct: 147 KTNTSITTFNLDLQSKTSSADLADLLSENKTIEHLRIY-----DLHGSIAAIASTQMKNP 201

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
            LK L R+  P N +      A ++    N+ LR L L  N I  +GAI +  AL     
Sbjct: 202 SLKAL-RIRCP-NEVSSEDAAAFAEMLSHNQVLRKLRLEGN-IEVEGAIAIASALKTKSV 258

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L  L+L    +   GA +IA  L  N+TLE ++L CN I  +G + +  A+K  + L+ +
Sbjct: 259 LRKLSLYSNNIGDKGAIAIASALKTNSTLEKLDLRCNNIGDEGAIAMANALKTNSTLENL 318

Query: 439 NVSENQFGEEGVEEMEKLMKS 459
           N+  N  G+EG   M   +K+
Sbjct: 319 NLQGNNIGDEGTISMANALKT 339



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 3/140 (2%)

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
           LK L R+  P N +      A ++    N+ L+ L L  N I  +GAI +  AL     L
Sbjct: 12  LKAL-RIRCP-NEVSSEDAAAFAEMLSHNQVLKELCLEGN-IEVEGAIAIASALKTKSVL 68

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
             L+L    +   GA +IA  L  N+TLE+++L CN I  +G + +  A+K  + L+ +N
Sbjct: 69  RKLSLYSNNIGDKGAIAIASALKTNSTLENLDLRCNNIGDEGAIAMANALKTNSTLENLN 128

Query: 440 VSENQFGEEGVEEMEKLMKS 459
           + EN  G+E +  + K +K+
Sbjct: 129 LQENNIGDEVLSSIIKTLKT 148



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           V +KL+   ++E+        G  A++ A +    LR L+L  N I  KGAI +  AL  
Sbjct: 231 VLRKLRLEGNIEVE-------GAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASALKT 283

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
             +L  L+L    +   GA ++A  L  N+TLE++NL  N I  +G + +  A+K  + L
Sbjct: 284 NSTLEKLDLRCNNIGDEGAIAMANALKTNSTLENLNLQGNNIGDEGTISMANALKTNSTL 343

Query: 125 KQINV 129
           + +++
Sbjct: 344 RSLDL 348



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 54/108 (50%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           +E EGA  +A+  K    L ++ +  N I   G  A++ A + N  L +L+L  N I  +
Sbjct: 50  IEVEGAIAIASALKTKSVLRKLSLYSNNIGDKGAIAIASALKTNSTLENLDLRCNNIGDE 109

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
           GAI +  AL    +L  LNL +  +     SSI K L  NT++   NL
Sbjct: 110 GAIAMANALKTNSTLENLNLQENNIGDEVLSSIIKTLKTNTSITTFNL 157



 Score = 38.5 bits (88), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 53/209 (25%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + ++GA  +A+  K   TLE +++  N I   G  A+++A + N  L +LNL +N I 
Sbjct: 76  NNIGDKGAIAIASALKTNSTLENLDLRCNNIGDEGAIAMANALKTNSTLENLNLQENNIG 135

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGA------------------------SSIA 398
            +    + + L    S+   NL D   K++ A                        ++IA
Sbjct: 136 DEVLSSIIKTLKTNTSITTFNL-DLQSKTSSADLADLLSENKTIEHLRIYDLHGSIAAIA 194

Query: 399 KYLTDNTTLEDVNLTC-NEIS---------------------------VQGGLDLVKAMK 430
                N +L+ + + C NE+S                           V+G + +  A+K
Sbjct: 195 STQMKNPSLKALRIRCPNEVSSEDAAAFAEMLSHNQVLRKLRLEGNIEVEGAIAIASALK 254

Query: 431 NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            K+ L+++++  N  G++G   +   +K+
Sbjct: 255 TKSVLRKLSLYSNNIGDKGAIAIASALKT 283


>gi|198431313|ref|XP_002120047.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
           intestinalis]
          Length = 661

 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 116/253 (45%), Gaps = 14/253 (5%)

Query: 197 HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 256
           H   N SH+    +   +  + + + T   ++EL++ DN     G+  +AD+L  +C  +
Sbjct: 96  HEVMNMSHHGLGPNGTKAIAAPLVINTS--ILELNIEDNWITAEGMRDIADMLMENCYIS 153

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +  L +++N LG  G + + + L +             L+     RN  ++   +  A  
Sbjct: 154 I--LNISHNKLGSEGARYVGEMLQEN----------TTLRTLNISRNDFKDSDGQYFAEA 201

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            ++   L+ +++  N    +G   +  A   N+ +  LNL+ N +  KGA+ +   +   
Sbjct: 202 LRQNFRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSN 261

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            ++  L+L        GA ++ + L  N TL  ++L+ N IS +G   L K ++    L+
Sbjct: 262 ITVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLR 321

Query: 437 QINVSENQFGEEG 449
            + + +N FGEEG
Sbjct: 322 TLRIGDNPFGEEG 334



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%)

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
           E + M  +G+   G  A++     N ++  LN+ DN IT +G   +   L +   ++ILN
Sbjct: 97  EVMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLMENCYISILN 156

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           +    L S GA  + + L +NTTL  +N++ N+     G    +A++   +LK++++S N
Sbjct: 157 ISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGN 216

Query: 444 QFGEEGVEEM 453
           +F E G E M
Sbjct: 217 EFCELGGEWM 226



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E + M  +G+   G  A++     N  +  LN+ DN IT +G   +   L +   ++ILN
Sbjct: 97  EVMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRDIADMLMENCYISILN 156

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           +    L S GA  + + L +NTTL  +N++ N+     G    +A++   +LK++++S N
Sbjct: 157 ISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGN 216

Query: 133 QFGEEGVEEM 142
           +F E G E M
Sbjct: 217 EFCELGGEWM 226



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 111/227 (48%), Gaps = 14/227 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL-HDCYESSKK 288
           +++S +  GP G + +A  L  +   ++ EL + +N +   G + ++  L  +CY     
Sbjct: 99  MNMSHHGLGPNGTKAIAAPLVINT--SILELNIEDNWITAEGMRDIADMLMENCY----- 151

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
                 + +     N+L +EGA+ +  + ++  TL  + + +N          ++A  +N
Sbjct: 152 ------ISILNISHNKLGSEGARYVGEMLQENTTLRTLNISRNDFKDSDGQYFAEALRQN 205

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L+ L+++ N     G   +GQA++   ++  LNL    L+  GA ++   +  N T++
Sbjct: 206 FRLKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVK 265

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            ++L+ N  + +G + + +A+K    L  +++S N+  ++G+  + K
Sbjct: 266 TLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAK 312



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 129/331 (38%), Gaps = 60/331 (18%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P    ++ L    ++N+    L   G  +IA  L  NT++ ++N+  N I+ +G  D
Sbjct: 83  GVVPASYFVTHLQH-EVMNMSHHGLGPNGTKAIAAPLVINTSILELNIEDNWITAEGMRD 141

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           +   +     +  +N+S N+ G EG   +                   GE          
Sbjct: 142 IADMLMENCYISILNISHNKLGSEGARYV-------------------GEM--------- 173

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
                         L  N +  + N S     +S+  +        +L+   RL ELD+S
Sbjct: 174 --------------LQENTTLRTLNISRNDFKDSDGQYFAE-----ALRQNFRLKELDIS 214

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            N F  +G E +   +  +   A+E L L+ N L + G      AL  C        S +
Sbjct: 215 GNEFCELGGEWMGQAI--AANEAIETLNLSWNHLRLKG------ALAVCAGMK----SNI 262

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
            +K      N   +EGA  +    K   TL  +++  N I   G+T L+   E N  LR 
Sbjct: 263 TVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRT 322

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
           L + DN    +GA+ L  A+ K    AI +L
Sbjct: 323 LRIGDNPFGEEGALLLINAIFKNEKSAIEDL 353



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N    +G   +  A   N+ +  LNL+ N +  KGA+ +   +    ++  L
Sbjct: 208 LKELDISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTL 267

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L        GA ++ + L  N TL  ++L+ N IS +G   L K ++    L+ + + +
Sbjct: 268 DLSWNGFADEGAMAMGEALKTNNTLVWLDLSFNRISDKGLTMLAKGLEVNDTLRTLRIGD 327

Query: 132 NQFGEEG 138
           N FGEEG
Sbjct: 328 NPFGEEG 334



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           + H ++   G  +VG     +  +EN  LR LN++ N           +AL +   L  L
Sbjct: 157 ISHNKLGSEGARYVG-----EMLQENTTLRTLNISRNDFKDSDGQYFAEALRQNFRLKEL 211

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           ++        G   + + +  N  +E +NL+ N + ++G L +   MK+   +K +++S 
Sbjct: 212 DISGNEFCELGGEWMGQAIAANEAIETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSW 271

Query: 132 NQFGEEGVEEMEKLMKS 148
           N F +EG   M + +K+
Sbjct: 272 NGFADEGAMAMGEALKT 288



 Score = 44.7 bits (104), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 69/134 (51%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + + +N          ++A  +N +L+ L+++ N     G   +GQA++   ++  
Sbjct: 179 TLRTLNISRNDFKDSDGQYFAEALRQNFRLKELDISGNEFCELGGEWMGQAIAANEAIET 238

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    L+  GA ++   +  N T++ ++L+ N  + +G + + +A+K    L  +++S
Sbjct: 239 LNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAMAMGEALKTNNTLVWLDLS 298

Query: 131 ENQFGEEGVEEMEK 144
            N+  ++G+  + K
Sbjct: 299 FNRISDKGLTMLAK 312



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +E + +  N +   G  A+    + N  ++ L+L+ N    +GA+ +G+AL    +L  L
Sbjct: 236 IETLNLSWNHLRLKGALAVCAGMKSNITVKTLDLSWNGFADEGAMAMGEALKTNNTLVWL 295

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN-KTKLKQINV 129
           +L    +   G + +AK L  N TL  + +  N    +G L L+ A+ KN K+ ++ +++
Sbjct: 296 DLSFNRISDKGLTMLAKGLEVNDTLRTLRIGDNPFGEEGALLLINAIFKNEKSAIEDLDL 355

Query: 130 SENQFGEEGVEEMEKL 145
              +   E +E  EKL
Sbjct: 356 KSVRVNREFLELAEKL 371


>gi|399497930|emb|CCG20293.1| Ran GTPase activating protein 2 [Solanum stenophyllidium]
          Length = 553

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G  L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GCNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEGEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITADAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   LV+ + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLVQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   LV+ + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLVQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNLISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 40/172 (23%)

Query: 312 MLAAVFKKLKTLE-------RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           +LAA+  +LK ++       R E     + HV   AL     E  NL+ LNL+DN +  K
Sbjct: 175 ILAALKDQLKEIDLSDFVAGRNEAEALDVMHVFSEAL-----EGCNLKFLNLSDNALGEK 229

Query: 365 GAIPLGQ------------------------ALSKL-PS---LAILNLGDCLLKSAGASS 396
           G    G+                        A+S+L PS   L +L+  + +    GA +
Sbjct: 230 GVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVA 289

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +N FG E
Sbjct: 290 IAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPE 341


>gi|399498114|emb|CCG20385.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497952|emb|CCG20304.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +G I +  AL   +PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSVPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G+ A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GVIAIANALKDSVPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497916|emb|CCG20286.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLREALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+L+ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+L+ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLREALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLREALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|344253491|gb|EGW09595.1| Leucine-rich repeat-containing protein LOC400891-like [Cricetulus
           griseus]
          Length = 419

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 12/238 (5%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L +   +  LDL DN     G E LAD+L  +    + ++ L++N +G  G + +  AL 
Sbjct: 48  LTSNVYIKRLDLRDNGLCGAGAEALADVLCKN--NIISDVDLSDNQIGAAGLQAICAALA 105

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                     +P   K+ + G NRLE + A+ LAA+  +  +L+ +++  N +  +    
Sbjct: 106 L---------NPAVQKMQLGG-NRLEEKAAQHLAALLLRHTSLKSLDLSYNQLNDLAGET 155

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L  A  EN  L  LNL+ N +   GAI L + L     L +L++       +GA+S+ + 
Sbjct: 156 LGPALAENTGLTELNLSWNHLRGPGAIALAKGLEANIFLKVLDISHNGFGDSGAASVGEA 215

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L  N  LE++N+  N IS+ G L L   ++    L+ + +S+N    EG   + K ++
Sbjct: 216 LKANNVLEELNMRNNRISMTGALKLGLGLQVNQTLRILIISKNPIRSEGYVSLLKSVR 273



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 29/187 (15%)

Query: 302 RNR-LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           R+R L  +GA+ LA++      ++R+++  NG+   G  AL+D   +N  +  ++L+DN 
Sbjct: 32  RHRGLGPQGARALASMLTSNVYIKRLDLRDNGLCGAGAEALADVLCKNNIISDVDLSDNQ 91

Query: 361 ITYKG------AIPLGQALSKL----------------------PSLAILNLGDCLLKSA 392
           I   G      A+ L  A+ K+                       SL  L+L    L   
Sbjct: 92  IGAAGLQAICAALALNPAVQKMQLGGNRLEEKAAQHLAALLLRHTSLKSLDLSYNQLNDL 151

Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
              ++   L +NT L ++NL+ N +   G + L K ++    LK +++S N FG+ G   
Sbjct: 152 AGETLGPALAENTGLTELNLSWNHLRGPGAIALAKGLEANIFLKVLDISHNGFGDSGAAS 211

Query: 453 MEKLMKS 459
           + + +K+
Sbjct: 212 VGEALKA 218



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 68/137 (49%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L+ +++  N +  +    L  A  EN  L  LNL+ N +   GAI L + L     L +
Sbjct: 137 SLKSLDLSYNQLNDLAGETLGPALAENTGLTELNLSWNHLRGPGAIALAKGLEANIFLKV 196

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L++       +GA+S+ + L  N  LE++N+  N IS+ G L L   ++    L+ + +S
Sbjct: 197 LDISHNGFGDSGAASVGEALKANNVLEELNMRNNRISMTGALKLGLGLQVNQTLRILIIS 256

Query: 131 ENQFGEEGVEEMEKLMK 147
           +N    EG   + K ++
Sbjct: 257 KNPIRSEGYVSLLKSVR 273



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 69/147 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V  K   +  V++  N I   G+ A+  A   N  ++ + L  N +  K A  L   
Sbjct: 72  LADVLCKNNIISDVDLSDNQIGAAGLQAICAALALNPAVQKMQLGGNRLEEKAAQHLAAL 131

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L+L    L      ++   L +NT L ++NL+ N +   G + L K ++  
Sbjct: 132 LLRHTSLKSLDLSYNQLNDLAGETLGPALAENTGLTELNLSWNHLRGPGAIALAKGLEAN 191

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
             LK +++S N FG+ G   + + +K+
Sbjct: 192 IFLKVLDISHNGFGDSGAASVGEALKA 218



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 72/143 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA++      ++ +++  NG+   G  AL+D   +N  +  ++L+DN I   G   +  A
Sbjct: 44  LASMLTSNVYIKRLDLRDNGLCGAGAEALADVLCKNNIISDVDLSDNQIGAAGLQAICAA 103

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+  P++  + LG   L+   A  +A  L  +T+L+ ++L+ N+++   G  L  A+   
Sbjct: 104 LALNPAVQKMQLGGNRLEEKAAQHLAALLLRHTSLKSLDLSYNQLNDLAGETLGPALAEN 163

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
           T L ++N+S N     G   + K
Sbjct: 164 TGLTELNLSWNHLRGPGAIALAK 186


>gi|399497994|emb|CCG20325.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 125/292 (42%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+        + A+ +  
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEA----ANAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE       G+   G + L +
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNT-----------------------ITY-----KGAIPLGQALS- 374
           A     +L+ L+L DN                        ++Y     +GAI +  AL  
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAIANALKD 380

Query: 375 KLPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 441 LIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTGVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTGVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|351712693|gb|EHB15612.1| Nucleotide-binding oligomerization domain-containing protein 2
            [Heterocephalus glaber]
          Length = 1051

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 17/227 (7%)

Query: 228  VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG-CKLLSKALHDCYESS 286
            + L L  N+ G IGVE L       C    + L L +N +   G CKL+  ALH  Y   
Sbjct: 832  LALQLDYNSVGDIGVEQLL-----PCLGVCKALYLRDNNISDRGICKLIEYALH--YGQL 884

Query: 287  KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            +K      L +F    NRL +  A  +A + +  +    + +  N I   G   L+    
Sbjct: 885  QK------LALF---NNRLTDGCAHSMAKLLECKQNFLALRLGNNHITAAGAQVLAQGLR 935

Query: 347  ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
             N +L+ L    NT+  KGA  L +AL    SL  L+L    + S GA ++A+ L  N  
Sbjct: 936  SNASLQFLGFWGNTVGDKGAQALAEALVDHHSLRWLSLVGNNIGSVGAQALAQMLEKNMA 995

Query: 407  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            LE++ L+ N ++ +G   L++A+++   + ++ +  N F  E +E +
Sbjct: 996  LEELWLSNNSVTYRGAEALLQALESNNTILEVWLRGNTFSPEEIERL 1042



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%)

Query: 20   NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
            N I   G   L+     N  L+ L    NT+  KGA  L +AL    SL  L+L    + 
Sbjct: 920  NHITAAGAQVLAQGLRSNASLQFLGFWGNTVGDKGAQALAEALVDHHSLRWLSLVGNNIG 979

Query: 80   SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            S GA ++A+ L  N  LE++ L+ N ++ +G   L++A+++   + ++ +  N F  E +
Sbjct: 980  SVGAQALAQMLEKNMALEELWLSNNSVTYRGAEALLQALESNNTILEVWLRGNTFSPEEI 1039

Query: 140  EEM 142
            E +
Sbjct: 1040 ERL 1042



 Score = 41.6 bits (96), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 13/202 (6%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +E LKL    +G T C  L+  L       +    PLAL++     N + + G + L   
Sbjct: 803 VEHLKLTFCSVGPTECAALAFVL-------RHLQQPLALQL---DYNSVGDIGVEQLLPC 852

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
               K L    +  N I   GI  L +       L+ L L +N +T   A  + + L   
Sbjct: 853 LGVCKALY---LRDNNISDRGICKLIEYALHYGQLQKLALFNNRLTDGCAHSMAKLLECK 909

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            +   L LG+  + +AGA  +A+ L  N +L+ +    N +  +G   L +A+ +   L+
Sbjct: 910 QNFLALRLGNNHITAAGAQVLAQGLRSNASLQFLGFWGNTVGDKGAQALAEALVDHHSLR 969

Query: 437 QINVSENQFGEEGVEEMEKLMK 458
            +++  N  G  G + + ++++
Sbjct: 970 WLSLVGNNIGSVGAQALAQMLE 991


>gi|410060810|gb|AFV53357.1| nucleotide-binding oligomerization domain-containing protein 1
           [Epinephelus coioides]
          Length = 940

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 10/188 (5%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +E L L NN +   G KL+++ + +C +          L+    G+N++ + G + LA+ 
Sbjct: 745 VEMLGLYNNEITDAGAKLVARIIEECPK----------LRTVKIGKNKITSVGGRYLASA 794

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            +K  ++  V M  N I   G  A ++A +++  L +L+L+ N IT KG   L +AL + 
Sbjct: 795 IQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSKGGKCLAEALKEN 854

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
             L I  L    L    A  +A+ +  NT L  + L  N+ +V G   L +A+ + T LK
Sbjct: 855 SVLRIFWLVQNELTDDAAPHLAELVQANTGLLHLWLISNQFTVDGIKQLAEALTHNTALK 914

Query: 437 QINVSENQ 444
           +I V  NQ
Sbjct: 915 EICVKGNQ 922



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 79/151 (52%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + + GAK++A + ++   L  V++ +N I  VG   L+ A +++ ++  + +  N+I 
Sbjct: 753 NEITDAGAKLVARIIEECPKLRTVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSIG 812

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA    +AL + P L  L+L    + S G   +A+ L +N+ L    L  NE++    
Sbjct: 813 DEGAEAFAEALKQHPRLTNLSLSANGITSKGGKCLAEALKENSVLRIFWLVQNELTDDAA 872

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             L + ++  T L  + +  NQF  +G++++
Sbjct: 873 PHLAELVQANTGLLHLWLISNQFTVDGIKQL 903



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 68/132 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+  +K  ++  V M  N I   G  A ++A +++ +L +L+L+ N IT KG   L +A
Sbjct: 791 LASAIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSKGGKCLAEA 850

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +   L I  L    L    A  +A+ +  NT L  + L  N+ +V G   L +A+ + 
Sbjct: 851 LKENSVLRIFWLVQNELTDDAAPHLAELVQANTGLLHLWLISNQFTVDGIKQLAEALTHN 910

Query: 122 TKLKQINVSENQ 133
           T LK+I V  NQ
Sbjct: 911 TALKEICVKGNQ 922



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 77/157 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NRL +   ++LA    K K +E + +  N I   G   ++   EE   LR + +  N IT
Sbjct: 725 NRLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLVARIIEECPKLRTVKIGKNKIT 784

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   L  A+ K  S+  + +    +   GA + A+ L  +  L +++L+ N I+ +GG
Sbjct: 785 SVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSKGG 844

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             L +A+K  + L+   + +N+  ++    + +L+++
Sbjct: 845 KCLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQA 881



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 72/142 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A + ++   L  V++ +N I  VG   L+ A +++  +  + +  N+I  +GA    +
Sbjct: 762 LVARIIEECPKLRTVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAE 821

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL + P L  L+L    + S G   +A+ L +N+ L    L  NE++      L + ++ 
Sbjct: 822 ALKQHPRLTNLSLSANGITSKGGKCLAEALKENSVLRIFWLVQNELTDDAAPHLAELVQA 881

Query: 121 KTKLKQINVSENQFGEEGVEEM 142
            T L  + +  NQF  +G++++
Sbjct: 882 NTGLLHLWLISNQFTVDGIKQL 903



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 73/148 (49%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA    K K +E + +  N I   G   ++   EE  KLR + +  N IT  G   L  
Sbjct: 734 VLAEELCKHKIVEMLGLYNNEITDAGAKLVARIIEECPKLRTVKIGKNKITSVGGRYLAS 793

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A+ K  S+  + +    +   GA + A+ L  +  L +++L+ N I+ +GG  L +A+K 
Sbjct: 794 AIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPRLTNLSLSANGITSKGGKCLAEALKE 853

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
            + L+   + +N+  ++    + +L+++
Sbjct: 854 NSVLRIFWLVQNELTDDAAPHLAELVQA 881



 Score = 41.6 bits (96), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V+M  N I   G+  L  +F    K+  + L+ N ++      L + L K   + +L L 
Sbjct: 695 VDMDNNNISDYGVKQLKPSFS---KMTVVRLSVNRLSDSSIEVLAEELCKHKIVEMLGLY 751

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           +  +  AGA  +A+ + +   L  V +  N+I+  GG  L  A++  T +  + +  N  
Sbjct: 752 NNEITDAGAKLVARIIEECPKLRTVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSI 811

Query: 135 GEEGVEEMEKLMK 147
           G+EG E   + +K
Sbjct: 812 GDEGAEAFAEALK 824



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           V+M  N I   G+  L  +F +   +R   L+ N ++      L + L K   + +L L 
Sbjct: 695 VDMDNNNISDYGVKQLKPSFSKMTVVR---LSVNRLSDSSIEVLAEELCKHKIVEMLGLY 751

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           +  +  AGA  +A+ + +   L  V +  N+I+  GG  L  A++  T +  + +  N  
Sbjct: 752 NNEITDAGAKLVARIIEECPKLRTVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSI 811

Query: 446 GEEGVEEMEKLMK 458
           G+EG E   + +K
Sbjct: 812 GDEGAEAFAEALK 824


>gi|334348993|ref|XP_001381520.2| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Monodelphis domestica]
          Length = 921

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 17/201 (8%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L+NN L    C    K L  C+           L V     NR+ + GA++L+    K
Sbjct: 677 LDLDNNNL----CDYGVKELRPCFGR---------LTVIRLSVNRIADAGARVLSEELTK 723

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            K +  + +  N I  VG T ++   EE   L HL +  N +T +G   L  AL K  S 
Sbjct: 724 YKIVTFLGLYNNQITDVGATYVAKILEECPGLTHLKIGANLLTSEGGKCLAAALKK--SR 781

Query: 380 AILNLGDC--LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
           +IL++G     +   GA + A  L D+ +L  ++L  N IS +GG  L +A++  + +K 
Sbjct: 782 SILDIGMWGNKIGDEGAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQQNSSMKI 841

Query: 438 INVSENQFGEEGVEEMEKLMK 458
             +++N   +E  E + ++++
Sbjct: 842 FWLTKNNLDDEAAESLAEMLE 862



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 10/189 (5%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L NN +   G   ++K L +C   +        LK+   G N L +EG K LAA  KK
Sbjct: 730 LGLYNNQITDVGATYVAKILEECPGLTH-------LKI---GANLLTSEGGKCLAAALKK 779

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            +++  + M  N I   G  A +DA  ++ +L  L+L  N I+ +G   L QAL +  S+
Sbjct: 780 SRSILDIGMWGNKIGDEGAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQALQQNSSM 839

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            I  L    L    A S+A+ L  N TL D+ L  N+I+ +G   L  A++  + +  I 
Sbjct: 840 KIFWLTKNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKNSSILDIC 899

Query: 440 VSENQFGEE 448
           +S N    E
Sbjct: 900 LSGNPIKPE 908



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 67/136 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA  KK +++  + M  N I   G  A +DA  ++  L  L+L  N I+ +G   L QA
Sbjct: 773 LAAALKKSRSILDIGMWGNKIGDEGAKAFADALRDHPSLATLSLAFNGISTEGGKSLAQA 832

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  S+ I  L    L    A S+A+ L  N TL D+ L  N+I+ +G   L  A++  
Sbjct: 833 LQQNSSMKIFWLTKNNLDDEAAESLAEMLEVNQTLNDLWLIQNQITAKGLSRLADALQKN 892

Query: 122 TKLKQINVSENQFGEE 137
           + +  I +S N    E
Sbjct: 893 SSILDICLSGNPIKPE 908



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N I   G   LS+   + K +  L L +N IT  GA  + + L + P L  L
Sbjct: 699 LTVIRLSVNRIADAGARVLSEELTKYKIVTFLGLYNNQITDVGATYVAKILEECPGLTHL 758

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +G  LL S G   +A  L  + ++ D+ +  N+I  +G      A+++   L  ++++ 
Sbjct: 759 KIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGAKAFADALRDHPSLATLSLAF 818

Query: 132 NQFGEEG 138
           N    EG
Sbjct: 819 NGISTEG 825



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 3/138 (2%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N +   G+  L   F    +L  + L+ N I   GA  L + L+K   +  L L +  + 
Sbjct: 682 NNLCDYGVKELRPCF---GRLTVIRLSVNRIADAGARVLSEELTKYKIVTFLGLYNNQIT 738

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
             GA+ +AK L +   L  + +  N ++ +GG  L  A+K    +  I +  N+ G+EG 
Sbjct: 739 DVGATYVAKILEECPGLTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGA 798

Query: 140 EEMEKLMKSFGMAAALVL 157
           +     ++     A L L
Sbjct: 799 KAFADALRDHPSLATLSL 816



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 69/141 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + ++   L H+++  N +   G   L+ A ++++ +  + +  N I  +GA     A
Sbjct: 745 VAKILEECPGLTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGAKAFADA 804

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSLA L+L    + + G  S+A+ L  N++++   LT N +  +    L + ++  
Sbjct: 805 LRDHPSLATLSLAFNGISTEGGKSLAQALQQNSSMKIFWLTKNNLDDEAAESLAEMLEVN 864

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             L  + + +NQ   +G+  +
Sbjct: 865 QTLNDLWLIQNQITAKGLSRL 885



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 3/138 (2%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N +   G+  L   F     L  + L+ N I   GA  L + L+K   +  L L +  + 
Sbjct: 682 NNLCDYGVKELRPCF---GRLTVIRLSVNRIADAGARVLSEELTKYKIVTFLGLYNNQIT 738

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
             GA+ +AK L +   L  + +  N ++ +GG  L  A+K    +  I +  N+ G+EG 
Sbjct: 739 DVGATYVAKILEECPGLTHLKIGANLLTSEGGKCLAAALKKSRSILDIGMWGNKIGDEGA 798

Query: 451 EEMEKLMKSFGMAAALVL 468
           +     ++     A L L
Sbjct: 799 KAFADALRDHPSLATLSL 816


>gi|241258067|ref|XP_002404689.1| leucine rich repeat and NACHT domain-containing protein, putative
           [Ixodes scapularis]
 gi|215496680|gb|EEC06320.1| leucine rich repeat and NACHT domain-containing protein, putative
           [Ixodes scapularis]
          Length = 718

 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 40/238 (16%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           S+ T  RL +LDLS+N  G  G + L  L     C +++ LKL++N +G+          
Sbjct: 187 SVATWTRLADLDLSEN--GLRGCDSLKLLEAVDTCKSIKYLKLDSNMVGV---------- 234

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                                        GA+ LA +    KTL R+ + +  I   G  
Sbjct: 235 ----------------------------RGAQRLAKLLTANKTLLRLSLFKTKIQDKGAV 266

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+  A   N  L  L + +N+I   GA  +  +L    SL  L+L    L + GA  IA+
Sbjct: 267 AIGHALAANNTLESLMIGENSIGSTGARAIASSLKVNTSLICLDLRYNDLANGGAIFIAQ 326

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            L  N TL +++L  NEI   G + +  ++ N + L ++ +  N F EEGV  + +L+
Sbjct: 327 MLPSNKTLRELHLCGNEIGEAGIVAVADSLANNSTLLELCLDGNLFDEEGVAALARLI 384



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 71/145 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA +    KTL  + + +  I   G  A+  A   N  L  L + +N+I   GA  +  +
Sbjct: 240 LAKLLTANKTLLRLSLFKTKIQDKGAVAIGHALAANNTLESLMIGENSIGSTGARAIASS 299

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL  L+L    L + GA  IA+ L  N TL +++L  NEI   G + +  ++ N 
Sbjct: 300 LKVNTSLICLDLRYNDLANGGAIFIAQMLPSNKTLRELHLCGNEIGEAGIVAVADSLANN 359

Query: 122 TKLKQINVSENQFGEEGVEEMEKLM 146
           + L ++ +  N F EEGV  + +L+
Sbjct: 360 STLLELCLDGNLFDEEGVAALARLI 384



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 84/190 (44%), Gaps = 31/190 (16%)

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
           +G P+ LK+      R    G   L         L  +++ +NG+       L +A +  
Sbjct: 163 QGDPVRLKL---CHVRFGATGMTSLVQSVATWTRLADLDLSENGLRGCDSLKLLEAVDTC 219

Query: 349 KNLRHLNLNDNTITY----------------------------KGAIPLGQALSKLPSLA 380
           K++++L L+ N +                              KGA+ +G AL+   +L 
Sbjct: 220 KSIKYLKLDSNMVGVRGAQRLAKLLTANKTLLRLSLFKTKIQDKGAVAIGHALAANNTLE 279

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
            L +G+  + S GA +IA  L  NT+L  ++L  N+++  G + + + + +   L+++++
Sbjct: 280 SLMIGENSIGSTGARAIASSLKVNTSLICLDLRYNDLANGGAIFIAQMLPSNKTLRELHL 339

Query: 441 SENQFGEEGV 450
             N+ GE G+
Sbjct: 340 CGNEIGEAGI 349



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 28/156 (17%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITY------------------- 52
           L  +++ +NG+       L +A +  K +++L L+ N +                     
Sbjct: 194 LADLDLSENGLRGCDSLKLLEAVDTCKSIKYLKLDSNMVGVRGAQRLAKLLTANKTLLRL 253

Query: 53  ---------KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 103
                    KGA+ +G AL+   +L  L +G+  + S GA +IA  L  NT+L  ++L  
Sbjct: 254 SLFKTKIQDKGAVAIGHALAANNTLESLMIGENSIGSTGARAIASSLKVNTSLICLDLRY 313

Query: 104 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           N+++  G + + + + +   L+++++  N+ GE G+
Sbjct: 314 NDLANGGAIFIAQMLPSNKTLRELHLCGNEIGEAGI 349


>gi|399497896|emb|CCG20276.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341


>gi|109462625|ref|XP_001072321.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14-like
           [Rattus norvegicus]
          Length = 994

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 110/216 (50%), Gaps = 17/216 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L++   LV L+LS N+    GV+ L ++L +  C  LE L L + GL   GC++LS AL
Sbjct: 683 ALQSNRSLVFLNLSTNSLSNDGVKSLCEVLENPNC-PLERLALASCGLTKVGCEVLSSAL 741

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGI 338
                +  K  + L L       N LE+EG ++L+   +  + TL+ + +       +G 
Sbjct: 742 -----TKTKRLTHLCL-----AHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGS 791

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASS 396
             LS A + NK+L HL+L  N +   G   L Q L + P  +L  L L  C+L S     
Sbjct: 792 EHLSTALQNNKSLIHLDLGFNKLADSGVKLLCQTLQQ-PNCNLQELELMGCVLTSEACGD 850

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLD-LVKAMKN 431
           +A  L +N+ L +++L  N I    GL+ L +A++N
Sbjct: 851 LASVLVNNSNLWNLDLG-NNILDDAGLNILCEALRN 885



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           +  LDL D   G  GV+ L + L+   C  L  L+L +  L +T C+ LSKAL       
Sbjct: 633 VTHLDLKDTDLGDNGVKTLCEALKYQGC-KLRVLRLESCDLNVTHCQNLSKALQ------ 685

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAF 345
               S  +L       N L N+G K L  V +     LER+ +   G+  VG   LS A 
Sbjct: 686 ----SNRSLVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSAL 741

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLTD 403
            + K L HL L  N +  +G   L   L + P  +L  L L  C     G+  ++  L +
Sbjct: 742 TKTKRLTHLCLAHNVLEDEGIELLSYTL-RHPRCTLQSLVLRCCYFTPIGSEHLSTALQN 800

Query: 404 NTTLEDVNLTCNEISVQG 421
           N +L  ++L  N+++  G
Sbjct: 801 NKSLIHLDLGFNKLADSG 818


>gi|449432716|ref|XP_004134145.1| PREDICTED: RAN GTPase-activating protein 2-like [Cucumis sativus]
 gi|449530527|ref|XP_004172246.1| PREDICTED: RAN GTPase-activating protein 2-like [Cucumis sativus]
          Length = 540

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 49/284 (17%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LS+NA G  GV     LL+S  C  LEEL L N+G+     + +S       
Sbjct: 213 GSILRSLNLSNNALGEKGVRAFGSLLKSQSC--LEELYLMNDGISKEAAQAVSELIPSTD 270

Query: 277 --KALHDCYESSKKEGS---------PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
             + LH     +  EG+          L L+ F     R+++EG   L+        L++
Sbjct: 271 KLRILHFHNNMTGDEGAFAIAEVVKRSLLLEDFRCSSTRIDSEGGVALSLALGTCPRLKK 330

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL-PSLAIL-- 382
           +++  N     G  ALS A   + +L+ L L+   +  +GAI +   L    P+L +L  
Sbjct: 331 LDLRDNMFGVEGGVALSKALSHHADLKELYLSYQNLEDEGAIAIANILKDTAPTLEVLEI 390

Query: 383 --------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
                                     NLG+  LK  G   I+K +     L+ V++  N 
Sbjct: 391 AGNDITAEAASALAACITQKAHLISLNLGENELKDEGTIQISKAIEGLIKLKKVDMNTNL 450

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           I   G   L + +  K   + +N++ N   +EG++E++ + K F
Sbjct: 451 IRRAGTRVLAQTVVQKPDFQLLNINGNFISDEGIDELKDIFKKF 494



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A V K+   LE        I   G  ALS A     +L+ L+L DN    +G + L +A
Sbjct: 290 IAEVVKRSLLLEDFRCSSTRIDSEGGVALSLALGTCPRLKKLDLRDNMFGVEGGVALSKA 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LS    L  L L    L+  GA +IA  L D   TLE + +  N+I+ +    L   +  
Sbjct: 350 LSHHADLKELYLSYQNLEDEGAIAIANILKDTAPTLEVLEIAGNDITAEAASALAACITQ 409

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L  +N+ EN+  +EG  ++ K ++
Sbjct: 410 KAHLISLNLGENELKDEGTIQISKAIE 436



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L IL
Sbjct: 216 LRSLNLSNNALGEKGVRAFGSLLKSQSCLEELYLMNDGISKEAAQAVSELIPSTDKLRIL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   I  +GG+ L  A+    +LK++++ +
Sbjct: 276 HFHNNMTGDEGAFAIAEVVKRSLLLEDFRCSSTRIDSEGGVALSLALGTCPRLKKLDLRD 335

Query: 132 NQFGEEG 138
           N FG EG
Sbjct: 336 NMFGVEG 342



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 66/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             ++ K    LE + +  +GI      A+S+      KLR L+ ++N    +GA  + + 
Sbjct: 234 FGSLLKSQSCLEELYLMNDGISKEAAQAVSELIPSTDKLRILHFHNNMTGDEGAFAIAEV 293

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + +   L         + S G  +++  L     L+ ++L  N   V+GG+ L KA+ + 
Sbjct: 294 VKRSLLLEDFRCSSTRIDSEGGVALSLALGTCPRLKKLDLRDNMFGVEGGVALSKALSHH 353

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK++ +S     +EG   +  ++K
Sbjct: 354 ADLKELYLSYQNLEDEGAIAIANILK 379



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 127/332 (38%), Gaps = 70/332 (21%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L  LNL +  L   G  +    L   + LE++ L  + IS +    + + + +  KL+ +
Sbjct: 216 LRSLNLSNNALGEKGVRAFGSLLKSQSCLEELYLMNDGISKEAAQAVSELIPSTDKLRIL 275

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
           +   N  G+EG   + +++K      +L+LED    CS    D E               
Sbjct: 276 HFHNNMTGDEGAFAIAEVVKR-----SLLLED--FRCSSTRIDSEG-----------GVA 317

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
           LS                             ++L T  RL +LDL DN FG   VEG   
Sbjct: 318 LS-----------------------------LALGTCPRLKKLDLRDNMFG---VEGGVA 345

Query: 248 LLRSSCCFA-LEELKLNNNGLGITGCKLLSKALHDC---YESSKKEGSPLA--------- 294
           L ++    A L+EL L+   L   G   ++  L D     E  +  G+ +          
Sbjct: 346 LSKALSHHADLKELYLSYQNLEDEGAIAIANILKDTAPTLEVLEIAGNDITAEAASALAA 405

Query: 295 -------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
                  L     G N L++EG   ++   + L  L++V+M  N I   G   L+    +
Sbjct: 406 CITQKAHLISLNLGENELKDEGTIQISKAIEGLIKLKKVDMNTNLIRRAGTRVLAQTVVQ 465

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             + + LN+N N I+ +G   L     K P +
Sbjct: 466 KPDFQLLNINGNFISDEGIDELKDIFKKFPDM 497



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 29/160 (18%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE +E+  N I     +AL+    +   L  LNL +N +  +G I + +A+  L  L  
Sbjct: 384 TLEVLEIAGNDITAEAASALAACITQKAHLISLNLGENELKDEGTIQISKAIEGLIKLKK 443

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           +++   L++ AG   +A+ +                              K   + +N++
Sbjct: 444 VDMNTNLIRRAGTRVLAQTVV----------------------------QKPDFQLLNIN 475

Query: 131 ENQFGEEGVEEMEKLMKSFG-MAAALVLEDDEGECSDEEQ 169
            N   +EG++E++ + K F  M   L   D EGE  D+E+
Sbjct: 476 GNFISDEGIDELKDIFKKFPDMLGPLDENDPEGEDGDDEE 515


>gi|320168103|gb|EFW45002.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 682

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 12/203 (5%)

Query: 257 LEELKLNNNGLGITGCKLLSKALH-DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           + ELKL  N +   G + +++A+  +C            L V     NR+ + GA+  A 
Sbjct: 50  MTELKLGGNLIADVGARAIAEAVRANC-----------TLTVVDLAENRIGDAGARAFAE 98

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
             K   TL ++++ +N I   G  A+++A + NK L  L L  N I   GA  +  AL  
Sbjct: 99  TLKVNNTLTKLDLNENQIGDAGAQAIAEALKVNKTLTRLGLWHNQIGAAGAQAIADALKV 158

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L  L L    +   GA +IA+ L  NTTL  + L  N+I+  G   L  A+K  T +
Sbjct: 159 NTTLTELYLYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALADALKANTTV 218

Query: 436 KQINVSENQFGEEGVEEMEKLMK 458
            ++ + ENQ G+ G   + + +K
Sbjct: 219 TKLELGENQIGDAGARAIAEALK 241



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++ +N I   G  A+++A + NK L  L L  N I   GA  +  AL    +L  
Sbjct: 105 TLTKLDLNENQIGDAGAQAIAEALKVNKTLTRLGLWHNQIGAAGAQAIADALKVNTTLTE 164

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    +   GA +IA+ L  NTTL  + L  N+I+  G   L  A+K  T + ++ + 
Sbjct: 165 LYLYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALADALKANTTVTKLELG 224

Query: 131 ENQFGEEGVEEMEKLMK 147
           ENQ G+ G   + + +K
Sbjct: 225 ENQIGDAGARAIAEALK 241



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +++    L  +DL++N  G  G    A+ L+ +    L +L LN N +G  G + +++AL
Sbjct: 71  AVRANCTLTVVDLAENRIGDAGARAFAETLKVNNT--LTKLDLNENQIGDAGAQAIAEAL 128

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L L       N++   GA+ +A   K   TL  + + QN I   G  
Sbjct: 129 -----KVNKTLTRLGL-----WHNQIGAAGAQAIADALKVNTTLTELYLYQNKIGDDGAQ 178

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A E N  L  L L +N IT  GA  L  AL    ++  L LG+  +  AGA +IA+
Sbjct: 179 AIAEALEVNTTLTKLYLWENQITCTGAQALADALKANTTVTKLELGENQIGDAGARAIAE 238

Query: 400 YLTDNTTL 407
            L  N TL
Sbjct: 239 ALKVNETL 246



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 78/155 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  +++  N I  VG  A+++A   N  L  ++L +N I   GA    + L    +L  
Sbjct: 49  TMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLAENRIGDAGARAFAETLKVNNTLTK 108

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L +  +  AGA +IA+ L  N TL  + L  N+I   G   +  A+K  T L ++ + 
Sbjct: 109 LDLNENQIGDAGAQAIAEALKVNKTLTRLGLWHNQIGAAGAQAIADALKVNTTLTELYLY 168

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECS 165
           +N+ G++G + + + ++       L L +++  C+
Sbjct: 169 QNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCT 203


>gi|118379037|ref|XP_001022686.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89304453|gb|EAS02441.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 612

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 199/474 (41%), Gaps = 54/474 (11%)

Query: 2   LAAVFKKLKTLEHVEMP--QNGIYHVGITALSDAFEENKKLRHLNLN--DNTITYKGAIP 57
           L+     LKTL  +++   +N I   G + L  A E   +L  LNL+   + I  KGA  
Sbjct: 83  LSCALANLKTLSALKLSLSKNDIRDRGFSVLGSALENLTQLNSLNLDLQSSPICEKGAFD 142

Query: 58  LGQALSKLPSLAILNLGDCL--LKSAGASSIAKYLTDNTTLED--VNLTCNEISVQGGLD 113
           L Q+L K+ SL  L L  C   L+S GAS++   L+  + L +  V L  N I  +GG  
Sbjct: 143 LFQSLGKVSSLTHLTLQLCSFSLRSKGASALGSGLSKLSNLIELKVYLYSNSIDEEGGSA 202

Query: 114 LVKAMKNKTKLKQ--INVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDE 171
              A+ N TKL+   +++S N+ G +G   +   + +    + L L  D    SD+    
Sbjct: 203 FCSALANLTKLQNFVLDISWNKIGSKGASALNSSLLNLTDLSTLELTIDYCNISDQ---- 258

Query: 172 ESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVEL- 230
                       D  NL    SN  + +S       NQ         +S    A+L+++ 
Sbjct: 259 ------------DVINLGSTISNLVNISSLVVRFIGNQLSGQGLSGFIS--NFAKLIKIQ 304

Query: 231 ----DLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
               D S+N  G      L   L         +  L  NG+     + L   L      +
Sbjct: 305 ALNIDFSNNNIGQNFPSDLFSPLEHLTNLQDFKFNLQKNGIRSQSAQYLGSELGKLTNLT 364

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP--QNGIYHVGITALSDA 344
           K     L L++     N++E +G   L + FK L  L+ + +P   N I   G + L  A
Sbjct: 365 K-----LTLQI---NDNQIE-DGLSDLVSHFKNLTKLKILNLPLYSNNIQAQGASGLGSA 415

Query: 345 FEENKNLRHLN--LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG---ASSIAK 399
                 L+ +N  L  N I   G   L Q  + L +L  L+L   ++   G   +S+   
Sbjct: 416 LANLTQLQDMNIELFSNKIGTAGMAGLSQGFTNLTNLQTLHL-QLMINHIGNENSSTFGT 474

Query: 400 YLTDNTTLEDVNLTC--NEISVQGGLDLVKAMKNKTKLKQINVS--ENQFGEEG 449
           +L +   L+  +L+   N+++ Q    L  ++ N TKLK +N+    NQ G+EG
Sbjct: 475 FLDNLKNLQKFSLSLCYNKLNAQSIFSLGTSLANLTKLKNLNIDIMNNQLGQEG 528



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 31/236 (13%)

Query: 228 VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSK 287
           VE+DL  N FG  G+  L   L +    +L  L++           LL    +D Y+   
Sbjct: 19  VEIDLKANLFGEKGIIELNSFLEN--LNSLSSLQV-----------LLRPTFYDTYDEDG 65

Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE--RVEMPQNGIYHVGITALSDAF 345
            E S +        ++   +  A  L+     LKTL   ++ + +N I   G + L  A 
Sbjct: 66  CEISKI--------KDGEGDNAASGLSCALANLKTLSALKLSLSKNDIRDRGFSVLGSAL 117

Query: 346 EENKNLRHLNLN--DNTITYKGAIPLGQALSKLPSLAILNLGDC--LLKSAGASSIAKYL 401
           E    L  LNL+   + I  KGA  L Q+L K+ SL  L L  C   L+S GAS++   L
Sbjct: 118 ENLTQLNSLNLDLQSSPICEKGAFDLFQSLGKVSSLTHLTLQLCSFSLRSKGASALGSGL 177

Query: 402 TDNTTLED--VNLTCNEISVQGGLDLVKAMKNKTKLKQ--INVSENQFGEEGVEEM 453
           +  + L +  V L  N I  +GG     A+ N TKL+   +++S N+ G +G   +
Sbjct: 178 SKLSNLIELKVYLYSNSIDEEGGSAFCSALANLTKLQNFVLDISWNKIGSKGASAL 233


>gi|326431802|gb|EGD77372.1| hypothetical protein PTSG_12731 [Salpingoeca sp. ATCC 50818]
          Length = 1013

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 15/234 (6%)

Query: 227 LVELDLSDNAFGPIGVEGLADLL-RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           L  L+LS N  GP+  E ++DL+ R+S   AL  L L++  L  T    +  +L +    
Sbjct: 344 LRTLNLSRNTIGPLSAECISDLIARNS---ALRSLDLSHMCLDDTHLATIKPSLEET--- 397

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                  + L       N+++  G   L  V  +  ++E +++  N I   G  A+ DAF
Sbjct: 398 -------VTLASLNLSGNKIDEFGGIHLGEVVSRNTSIEVLDVSWNAIRLRGAMAIMDAF 450

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDN 404
           + N ++  L +  N I   GA+ L +AL +  +L  ++L +  +   G  S+A  L +DN
Sbjct: 451 KSNSSIHTLYIGWNGIADYGALVLSEALKQNTTLREVDLTNNRITLDGCKSLASVLKSDN 510

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            TLE + +  N I+ +G  +LV+A+     L+ I+ +     +E ++ +E++ +
Sbjct: 511 RTLEVLLIALNPITNEGATELVEAVVENPTLRTIDATRVPVSQELMDRVEEMTR 564



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 83/166 (50%)

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
           AL+     RN +    A+ ++ +  +   L  +++    +    +  +  + EE   L  
Sbjct: 343 ALRTLNLSRNTIGPLSAECISDLIARNSALRSLDLSHMCLDDTHLATIKPSLEETVTLAS 402

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           LNL+ N I   G I LG+ +S+  S+ +L++    ++  GA +I      N+++  + + 
Sbjct: 403 LNLSGNKIDEFGGIHLGEVVSRNTSIEVLDVSWNAIRLRGAMAIMDAFKSNSSIHTLYIG 462

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            N I+  G L L +A+K  T L++++++ N+   +G + +  ++KS
Sbjct: 463 WNGIADYGALVLSEALKQNTTLREVDLTNNRITLDGCKSLASVLKS 508



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  V  +  ++E +++  N I   G  A+ DAF+ N  +  L +  N I   GA+ L +A
Sbjct: 418 LGEVVSRNTSIEVLDVSWNAIRLRGAMAIMDAFKSNSSIHTLYIGWNGIADYGALVLSEA 477

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L +  +L  ++L +  +   G  S+A  L +DN TLE + +  N I+ +G  +LV+A+  
Sbjct: 478 LKQNTTLREVDLTNNRITLDGCKSLASVLKSDNRTLEVLLIALNPITNEGATELVEAVVE 537

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
              L+ I+ +     +E ++ +E++ +
Sbjct: 538 NPTLRTIDATRVPVSQELMDRVEEMTR 564



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 66/122 (54%)

Query: 27  ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 86
           +  +  + EE   L  LNL+ N I   G I LG+ +S+  S+ +L++    ++  GA +I
Sbjct: 387 LATIKPSLEETVTLASLNLSGNKIDEFGGIHLGEVVSRNTSIEVLDVSWNAIRLRGAMAI 446

Query: 87  AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
                 N+++  + +  N I+  G L L +A+K  T L++++++ N+   +G + +  ++
Sbjct: 447 MDAFKSNSSIHTLYIGWNGIADYGALVLSEALKQNTTLREVDLTNNRITLDGCKSLASVL 506

Query: 147 KS 148
           KS
Sbjct: 507 KS 508



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 1/133 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + +  N I   G   L +    N  +  L+++ N I  +GA+ +  A     S+  
Sbjct: 399 TLASLNLSGNKIDEFGGIHLGEVVSRNTSIEVLDVSWNAIRLRGAMAIMDAFKSNSSIHT 458

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINV 129
           L +G   +   GA  +++ L  NTTL +V+LT N I++ G   L   +K+  + L+ + +
Sbjct: 459 LYIGWNGIADYGALVLSEALKQNTTLREVDLTNNRITLDGCKSLASVLKSDNRTLEVLLI 518

Query: 130 SENQFGEEGVEEM 142
           + N    EG  E+
Sbjct: 519 ALNPITNEGATEL 531


>gi|410060812|gb|AFV53358.1| nucleotide-binding oligomerization domain-containing protein 2
           [Epinephelus coioides]
          Length = 988

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 17/229 (7%)

Query: 228 VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC-KLLSKALHDCYESS 286
           V L L +N+ G +GVE L       C      L L NN +   G  KLL+K +  C    
Sbjct: 769 VGLQLDNNSVGDVGVEQLL-----PCMHICNSLHLRNNNITDEGIRKLLAKGIQCC---- 819

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
             +   +AL       N+L +   +  + + K  +    + +  N I   G   L++  +
Sbjct: 820 --DFQKIAL-----FNNKLTDACTQHFSHLLKTKQDFLALRLGNNNITEEGAKQLAEGLK 872

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N +L++L L  N I   GA  L  AL    +L  L+L    + SAGA ++A  + ++T+
Sbjct: 873 LNHSLQYLGLWGNRIGDAGAEALASALENSKTLIWLSLVGNGVGSAGACALANIIKNSTS 932

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           LE++ LT N+I+  G   L++A+++ T +K + +  N    E VEEM +
Sbjct: 933 LEELWLTQNQITRTGVECLIQALEHNTHVKSVWLRNNDLSLEEVEEMAQ 981



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 68/125 (54%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G   L++  + N  L++L L  N I   GA  L  AL    +L  L+L    + 
Sbjct: 857 NNITEEGAKQLAEGLKLNHSLQYLGLWGNRIGDAGAEALASALENSKTLIWLSLVGNGVG 916

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           SAGA ++A  + ++T+LE++ LT N+I+  G   L++A+++ T +K + +  N    E V
Sbjct: 917 SAGACALANIIKNSTSLEELWLTQNQITRTGVECLIQALEHNTHVKSVWLRNNDLSLEEV 976

Query: 140 EEMEK 144
           EEM +
Sbjct: 977 EEMAQ 981


>gi|326434060|gb|EGD79630.1| hypothetical protein PTSG_10478 [Salpingoeca sp. ATCC 50818]
          Length = 1257

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L++ GA  LA   +   +L+ + + +N I  VG  AL+D  E NK ++ L L+DN+I  +
Sbjct: 49  LDDNGASALAEALRGNTSLQELHLQRNSIGAVGAAALADVLENNKTVKQLWLDDNSIGPE 108

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G + L   L +  S+ +L L    +   GA+++A  L  NT + D+NL  N +  +G   
Sbjct: 109 GTVALADMLKRNNSVKVLWLSRNAIGPDGAAALADMLRHNTCIVDLNLGKNRMGDEGVRS 168

Query: 425 LVKAM-KNKTKLKQINVSEN 443
           L  A+  + T L +I V EN
Sbjct: 169 LAAALAHDNTTLNRIWVWEN 188



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 1/132 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   +   +L+ + + +N I  VG  AL+D  E NK ++ L L+DN+I  +G + L   
Sbjct: 57  LAEALRGNTSLQELHLQRNSIGAVGAAALADVLENNKTVKQLWLDDNSIGPEGTVALADM 116

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KN 120
           L +  S+ +L L    +   GA+++A  L  NT + D+NL  N +  +G   L  A+  +
Sbjct: 117 LKRNNSVKVLWLSRNAIGPDGAAALADMLRHNTCIVDLNLGKNRMGDEGVRSLAAALAHD 176

Query: 121 KTKLKQINVSEN 132
            T L +I V EN
Sbjct: 177 NTTLNRIWVWEN 188



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 1/149 (0%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           RN +   GA  LA V +  KT++++ +  N I   G  AL+D  + N +++ L L+ N I
Sbjct: 74  RNSIGAVGAAALADVLENNKTVKQLWLDDNSIGPEGTVALADMLKRNNSVKVLWLSRNAI 133

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQ 420
              GA  L   L     +  LNLG   +   G  S+A  L  DNTTL  + +  N++   
Sbjct: 134 GPDGAAALADMLRHNTCIVDLNLGKNRMGDEGVRSLAAALAHDNTTLNRIWVWENDLGPA 193

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEG 449
               L + +++ + L ++++S N  G  G
Sbjct: 194 AAGALAEMLRHNSWLSRLSLSNNDIGTSG 222



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 43/78 (55%)

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            + +GD  L   GAS++A+ L  NT+L++++L  N I   G   L   ++N   +KQ+ +
Sbjct: 41  FVRMGDAGLDDNGASALAEALRGNTSLQELHLQRNSIGAVGAAALADVLENNKTVKQLWL 100

Query: 130 SENQFGEEGVEEMEKLMK 147
            +N  G EG   +  ++K
Sbjct: 101 DDNSIGPEGTVALADMLK 118



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 43/78 (55%)

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
            + +GD  L   GAS++A+ L  NT+L++++L  N I   G   L   ++N   +KQ+ +
Sbjct: 41  FVRMGDAGLDDNGASALAEALRGNTSLQELHLQRNSIGAVGAAALADVLENNKTVKQLWL 100

Query: 441 SENQFGEEGVEEMEKLMK 458
            +N  G EG   +  ++K
Sbjct: 101 DDNSIGPEGTVALADMLK 118



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 13/148 (8%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           +L L DN+ GP G   LAD+L+ +   +++ L L+ N +G  G   L+  L       + 
Sbjct: 97  QLWLDDNSIGPEGTVALADMLKRNN--SVKVLWLSRNAIGPDGAAALADML-------RH 147

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEE 347
               + L +   G+NR+ +EG + LAA       TL R+ + +N +      AL++    
Sbjct: 148 NTCIVDLNL---GKNRMGDEGVRSLAAALAHDNTTLNRIWVWENDLGPAAAGALAEMLRH 204

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSK 375
           N  L  L+L++N I   G    G AL K
Sbjct: 205 NSWLSRLSLSNNDIGTSGGAAFGGALRK 232



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           R+ +  L DN     G   LA+ LR +   +L+EL L  N +G  G    + AL D  E+
Sbjct: 43  RMGDAGLDDN-----GASALAEALRGNT--SLQELHLQRNSIGAVG----AAALADVLEN 91

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
           +K       +K      N +  EG   LA + K+  +++ + + +N I   G  AL+D  
Sbjct: 92  NK------TVKQLWLDDNSIGPEGTVALADMLKRNNSVKVLWLSRNAIGPDGAAALADML 145

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDN 404
             N  +  LNL  N +  +G   L  AL+    +L  + + +  L  A A ++A+ L  N
Sbjct: 146 RHNTCIVDLNLGKNRMGDEGVRSLAAALAHDNTTLNRIWVWENDLGPAAAGALAEMLRHN 205

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           + L  ++L+ N+I   GG     A++    L+ + +  N
Sbjct: 206 SWLSRLSLSNNDIGTSGGAAFGGALRKNRTLEGLLIHHN 244



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 76/197 (38%), Gaps = 38/197 (19%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V +  KT++ + +  N I   G  AL+D  + N  ++ L L+ N I   GA  L   
Sbjct: 85  LADVLENNKTVKQLWLDDNSIGPEGTVALADMLKRNNSVKVLWLSRNAIGPDGAAALADM 144

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDV--------------------- 99
           L     +  LNLG   +   G  S+A  L  DNTTL  +                     
Sbjct: 145 LRHNTCIVDLNLGKNRMGDEGVRSLAAALAHDNTTLNRIWVWENDLGPAAAGALAEMLRH 204

Query: 100 -------NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
                  +L+ N+I   GG     A++    L+ + +  N           +  ++FG A
Sbjct: 205 NSWLSRLSLSNNDIGTSGGAAFGGALRKNRTLEGLLIHHNS---------SQAARAFGAA 255

Query: 153 AALVLEDDEGECSDEEQ 169
             +    D G  + EE+
Sbjct: 256 LPVNRRIDTGNWTSEER 272


>gi|169264970|dbj|BAG12313.1| nucleotide-binding oligomerization domain 1 [Sus scrofa]
          Length = 953

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 12/203 (5%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L NN +   G + +++ L +C            LK    G+N++ +EG K LA   K 
Sbjct: 761 LGLYNNQITDVGARYVARILDECK----------GLKCLKLGKNKITSEGGKCLARAVKN 810

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            +++  V M  N I   G  A ++A   + +L +L+L  N I+ +G   L QAL +  SL
Sbjct: 811 SRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQQNASL 870

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            I  L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N T + +I 
Sbjct: 871 RIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQNNTGIMEIC 930

Query: 440 VSENQFGEE--GVEEMEKLMKSF 460
           ++ N    E   V E EK +  F
Sbjct: 931 LNGNLIKPEEAKVFEDEKRIVCF 953



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +  +G K+L       YE   K      L ++    N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDSGVKVL-------YEELTKYEIVTFLGLY---NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +A +  + K L+ +++ +N I   G   L+ A + ++++  + +  N I  +GA    +A
Sbjct: 776 VARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  N +L    LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ    G   +
Sbjct: 896 QTLKHLWLIQNQITARGTARL 916



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +++  V M  N I   G  A ++A   +  L +L+L  N I+ +G   L QA
Sbjct: 804 LARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQA 863

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL I  L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 864 LQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQNN 923

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 924 TGIMEICLNGNLIKPEEAKVFEDEKRIVCF 953



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVIRLSVNQITDSGVKVLYEELTKYEIVTFLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +A+ L +   L+ + L  N+I+ +GG  L +A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 67/141 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  + K L+ +++ +N I   G   L+ A + ++ +  + +  N I  +GA    +A
Sbjct: 776 VARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEA 835

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    + + G  S+A+ L  N +L    LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKSLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVN 895

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             LK + + +NQ    G   +
Sbjct: 896 QTLKHLWLIQNQITARGTARL 916


>gi|149068415|gb|EDM17967.1| rCG39476, isoform CRA_b [Rattus norvegicus]
          Length = 990

 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 110/216 (50%), Gaps = 17/216 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L++   LV L+LS N+    GV+ L ++L +  C  LE L L + GL   GC++LS AL
Sbjct: 679 ALQSNRSLVFLNLSTNSLSNDGVKSLCEVLENPNC-PLERLALASCGLTKVGCEVLSSAL 737

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGI 338
                +  K  + L L       N LE+EG ++L+   +  + TL+ + +       +G 
Sbjct: 738 -----TKTKRLTHLCL-----AHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGS 787

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASS 396
             LS A + NK+L HL+L  N +   G   L Q L + P  +L  L L  C+L S     
Sbjct: 788 EHLSTALQNNKSLIHLDLGFNKLADSGVKLLCQTLQQ-PNCNLQELELMGCVLTSEACGD 846

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLD-LVKAMKN 431
           +A  L +N+ L +++L  N I    GL+ L +A++N
Sbjct: 847 LASVLVNNSNLWNLDLG-NNILDDAGLNILCEALRN 881



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           +  LDL D   G  GV+ L + L+   C  L  L+L +  L +T C+ LSKAL       
Sbjct: 629 VTHLDLKDTDLGDNGVKTLCEALKYQGC-KLRVLRLESCDLNVTHCQNLSKALQ------ 681

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAF 345
               S  +L       N L N+G K L  V +     LER+ +   G+  VG   LS A 
Sbjct: 682 ----SNRSLVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSAL 737

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLTD 403
            + K L HL L  N +  +G   L   L + P  +L  L L  C     G+  ++  L +
Sbjct: 738 TKTKRLTHLCLAHNVLEDEGIELLSYTL-RHPRCTLQSLVLRCCYFTPIGSEHLSTALQN 796

Query: 404 NTTLEDVNLTCNEISVQG 421
           N +L  ++L  N+++  G
Sbjct: 797 NKSLIHLDLGFNKLADSG 814


>gi|399497962|emb|CCG20309.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITVEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|343172599|gb|AEL99003.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 188/432 (43%), Gaps = 33/432 (7%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L D   E +  R ++++       G I L ++L+   ++  ++     + +AG  +    
Sbjct: 154 LDDFARELRSFRIVDMSGRNFGDDGLIFLAESLAYNKAVEEVDFSANGITAAGLKAFDGI 213

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L  N  L+ +NL+ N I  +G   L + + + T ++++ ++    G+EG + + +L++  
Sbjct: 214 LQSNFFLKTLNLSGNPIGDEGAKCLCEILVSNTGIQKLQLNSTGLGDEGAKAIAQLLRKN 273

Query: 150 GMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQ 209
               A+ L ++  + S       +  EN +                        H N N 
Sbjct: 274 SNLTAIELNNNTIDYSGFASIAGALLENST--------------------IRALHLNGNY 313

Query: 210 SHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
                  +    L+    + EL L  NA G  GV  L   L S+    +  L ++NN +G
Sbjct: 314 GGTLGVAALAKGLEGNKSVSELHLHGNAMGNEGVRSLMSGL-SARKGRMTLLDISNNEIG 372

Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
             G      A H   E  KK  S L L V++   N + +EGA+ +A   K+ +++  +++
Sbjct: 373 SRG------AFH-IAEYVKKTKSLLWLNVYM---NDIGDEGAEKIADALKQNRSITTIDL 422

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
             N I+  GIT +++  ++N  +  L +  N     GA  + + L    ++  L LG C 
Sbjct: 423 GGNNIHARGITCIAEILKDNNVITTLEIAYNPFGPDGAKAISEVLKFHGNVKTLKLGWCQ 482

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGE 447
           +   GA  IA  +  NTT+  ++L  N +   G + L +++K   + L  +++  N+  +
Sbjct: 483 IGRQGAEFIADMIKYNTTISTLDLRANGLMDDGAVCLAQSLKVVNEALTSVDLGFNEIRD 542

Query: 448 EGVEEMEKLMKS 459
            G   + + +K+
Sbjct: 543 TGAFAIAQALKA 554



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 170/415 (40%), Gaps = 33/415 (7%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K +E V+   NGI   G+ A     + N  L+ LNL+ N I  +GA  L + L     + 
Sbjct: 190 KAVEEVDFSANGITAAGLKAFDGILQSNFFLKTLNLSGNPIGDEGAKCLCEILVSNTGIQ 249

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L    L   GA +IA+ L  N+ L  + L  N I   G   +  A+   + ++ +++
Sbjct: 250 KLQLNSTGLGDEGAKAIAQLLRKNSNLTAIELNNNTIDYSGFASIAGALLENSTIRALHL 309

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N  G  GV  + K                 G   ++   E     N    EG  S +S
Sbjct: 310 NGNYGGTLGVAALAK-----------------GLEGNKSVSELHLHGNAMGNEGVRSLMS 352

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
              +           NN   S    + +    KT + L+ L++  N  G  G E +AD L
Sbjct: 353 GLSARKGRMTLLDISNNEIGSRGAFHIAEYVKKTKS-LLWLNVYMNDIGDEGAEKIADAL 411

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
           + +   ++  + L  N +   G   +++ L D    +  E             N    +G
Sbjct: 412 KQNR--SITTIDLGGNNIHARGITCIAEILKDNNVITTLE----------IAYNPFGPDG 459

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           AK ++ V K    ++ +++    I   G   ++D  + N  +  L+L  N +   GA+ L
Sbjct: 460 AKAISEVLKFHGNVKTLKLGWCQIGRQGAEFIADMIKYNTTISTLDLRANGLMDDGAVCL 519

Query: 370 GQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEISVQG 421
            Q+L  +  +L  ++LG   ++  GA +IA+ L  N    L  +NL+ N I+  G
Sbjct: 520 AQSLKVVNEALTSVDLGFNEIRDTGAFAIAQALKANEDVALTSINLSSNFITKLG 574



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 47/282 (16%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS+  LKT      L+LS N  G  G + L ++L S+    +++L+LN+ GLG  G K +
Sbjct: 215 QSNFFLKT------LNLSGNPIGDEGAKCLCEILVSNT--GIQKLQLNSTGLGDEGAKAI 266

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           ++ L       +K  +  A+++     N ++  G   +A    +  T+  + +  N    
Sbjct: 267 AQLL-------RKNSNLTAIEL---NNNTIDYSGFASIAGALLENSTIRALHLNGNYGGT 316

Query: 336 VGITALSDAFEENKNLRHLNLN-----------------------------DNTITYKGA 366
           +G+ AL+   E NK++  L+L+                             +N I  +GA
Sbjct: 317 LGVAALAKGLEGNKSVSELHLHGNAMGNEGVRSLMSGLSARKGRMTLLDISNNEIGSRGA 376

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + + + K  SL  LN+    +   GA  IA  L  N ++  ++L  N I  +G   + 
Sbjct: 377 FHIAEYVKKTKSLLWLNVYMNDIGDEGAEKIADALKQNRSITTIDLGGNNIHARGITCIA 436

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
           + +K+   +  + ++ N FG +G + + +++K  G    L L
Sbjct: 437 EILKDNNVITTLEIAYNPFGPDGAKAISEVLKFHGNVKTLKL 478



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + +K   L  +E+  N I + G  +++ A  EN  +R L+LN N     G   L + 
Sbjct: 266 IAQLLRKNSNLTAIELNNNTIDYSGFASIAGALLENSTIRALHLNGNYGGTLGVAALAKG 325

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT---DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L    S++ L+L    + + G  S+   L+      TL D+  + NEI  +G   + + +
Sbjct: 326 LEGNKSVSELHLHGNAMGNEGVRSLMSGLSARKGRMTLLDI--SNNEIGSRGAFHIAEYV 383

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           K    L  +NV  N  G+EG E++   +K
Sbjct: 384 KKTKSLLWLNVYMNDIGDEGAEKIADALK 412



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ +++  +++  N I+  GIT +++  ++N  +  L +  N     GA  + + 
Sbjct: 407 IADALKQNRSITTIDLGGNNIHARGITCIAEILKDNNVITTLEIAYNPFGPDGAKAISEV 466

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L LG C +   GA  IA  +  NTT+  ++L  N +   G + L +++K  
Sbjct: 467 LKFHGNVKTLKLGWCQIGRQGAEFIADMIKYNTTISTLDLRANGLMDDGAVCLAQSLKVV 526

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKS 148
            + L  +++  N+  + G   + + +K+
Sbjct: 527 NEALTSVDLGFNEIRDTGAFAIAQALKA 554


>gi|403288307|ref|XP_003935349.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
           3 [Saimiri boliviensis boliviensis]
          Length = 971

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 14/250 (5%)

Query: 210 SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
           SH       + L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 718 SHECCFDISLVLSSSQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLKKLWL 769

Query: 270 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
             C L S     C + +    +  +L     G N L + G ++L    K  +  L+++ +
Sbjct: 770 VSCCLTSAC---CQDLASVLSTNHSLTRLYMGENALGDAGVEILCEKAKNPQCHLQKLGL 826

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA-IPLGQALSKLPSLAILNLGDC 387
             +G+   G +ALS     N NL HL L  N +  KG  +  G  L     L +L L +C
Sbjct: 827 VNSGLTSAGCSALSAVLSTNGNLTHLYLRGNALGDKGIKLLCGGLLHPDCKLQVLELDNC 886

Query: 388 LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFG 446
            L S     ++  LT + +L  ++L  N++   G +   + +K ++  L+ + + E  F 
Sbjct: 887 SLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCALQSLGLCEMFFN 946

Query: 447 EEGVEEMEKL 456
            E    +E L
Sbjct: 947 YETKRALETL 956


>gi|222137286|gb|ACM45225.1| NOD2 receptor [Ictalurus punctatus]
          Length = 518

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 19/228 (8%)

Query: 228 VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC-KLLSKALH-DCYES 285
           + L L  N+ G +G+E L       C    + L L NN +   G  KL  K +H +C+  
Sbjct: 299 IGLQLDFNSVGDVGLEQLL-----PCLHICQSLYLRNNNISDEGIRKLAEKGVHCECF-- 351

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                  + + +F    N+L +E  K  A +FK  K    + +  N I   G   L++  
Sbjct: 352 -------VKVALF---NNKLTDECTKYFAWLFKTKKDFVALRLGNNKITSQGAEQLAEGL 401

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
             NK+L++L L  N I  KGA  L  AL    +L  L+L D  + SAGA ++A+ +  +T
Sbjct: 402 RYNKSLQYLGLWGNNIGDKGAEALADALKDSTTLIWLSLADNNVGSAGARALAELVKRST 461

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           T   + L  N I   G   L++A+K  + +K++ +  N    E V+E+
Sbjct: 462 TPLVLWLNPNCIKRDGVECLIEALKENSTVKEVWLRGNNLSAEEVKEL 509



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A +FK  K    + +  N I   G   L++    NK L++L L  N I  KGA  L  A
Sbjct: 369 FAWLFKTKKDFVALRLGNNKITSQGAEQLAEGLRYNKSLQYLGLWGNNIGDKGAEALADA 428

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L D  + SAGA ++A+ +  +TT   + L  N I   G   L++A+K  
Sbjct: 429 LKDSTTLIWLSLADNNVGSAGARALAELVKRSTTPLVLWLNPNCIKRDGVECLIEALKEN 488

Query: 122 TKLKQINVSENQFGEEGVEEM 142
           + +K++ +  N    E V+E+
Sbjct: 489 STVKEVWLRGNNLSAEEVKEL 509



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 21/232 (9%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEE---LKLNNNGLGITGCKLLSKALHDCYESS 286
           L L+    GP+    LA +LR      L     L+L+ N +G  G + L   LH C    
Sbjct: 273 LKLTYCNIGPVECTALAYVLRY-----LPNPIGLQLDFNSVGDVGLEQLLPCLHIC---- 323

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
                 L L+      N + +EG + LA      +   +V +  N +        +  F+
Sbjct: 324 ----QSLYLR-----NNNISDEGIRKLAEKGVHCECFVKVALFNNKLTDECTKYFAWLFK 374

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
             K+   L L +N IT +GA  L + L    SL  L L    +   GA ++A  L D+TT
Sbjct: 375 TKKDFVALRLGNNKITSQGAEQLAEGLRYNKSLQYLGLWGNNIGDKGAEALADALKDSTT 434

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L  ++L  N +   G   L + +K  T    + ++ N    +GVE + + +K
Sbjct: 435 LIWLSLADNNVGSAGARALAELVKRSTTPLVLWLNPNCIKRDGVECLIEALK 486



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 2/144 (1%)

Query: 34  FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 93
           F+  K    L L +N IT +GA  L + L    SL  L L    +   GA ++A  L D+
Sbjct: 373 FKTKKDFVALRLGNNKITSQGAEQLAEGLRYNKSLQYLGLWGNNIGDKGAEALADALKDS 432

Query: 94  TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAA 153
           TTL  ++L  N +   G   L + +K  T    + ++ N    +GVE + + +K      
Sbjct: 433 TTLIWLSLADNNVGSAGARALAELVKRSTTPLVLWLNPNCIKRDGVECLIEALKENSTVK 492

Query: 154 ALVLEDDEGECSDEEQDEESEEEN 177
            + L  +    S EE  E SE E+
Sbjct: 493 EVWLRGN--NLSAEEVKELSERES 514


>gi|149042678|gb|EDL96315.1| rCG49763 [Rattus norvegicus]
          Length = 185

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE++++  N I + G+  L  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 3   LAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQA 62

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++  
Sbjct: 63  LCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLN 122

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 158
             L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 123 RTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQ 159



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%)

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           LA   K  + LE +++  N I + G+  L  A   N+ L  LNL +N+I+ +GA  L QA
Sbjct: 3   LAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQA 62

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L +  +L  L+L   LL   GA +IA  + +N +L  ++L  N I       L +A++  
Sbjct: 63  LCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLN 122

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
             L  +++ EN  G+EG   +   +K      AL L+
Sbjct: 123 RTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQ 159



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 11/178 (6%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           LE L L +N +  TG  +L +AL  C   + +  S L L+      N +  EGA+ LA  
Sbjct: 13  LENLDLQSNAISNTGVAVLMRAL--C---TNQTLSSLNLR-----ENSISPEGAQALAQA 62

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
             +  TL+ +++  N ++  G  A++ A  EN +L HL+L  N I    A  LGQAL   
Sbjct: 63  LCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLN 122

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKT 433
            +L  L+L +  +   GASS+A  L  NTTL  + L    I  QG   L +A+  N+T
Sbjct: 123 RTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRT 180



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA    +  TL+H+++  N ++  G  A++ A  EN  L HL+L  N I    A  LGQA
Sbjct: 59  LAQALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQA 118

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-N 120
           L    +L  L+L +  +   GASS+A  L  NTTL  + L    I  QG   L +A+  N
Sbjct: 119 LQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVN 178

Query: 121 KT 122
           +T
Sbjct: 179 RT 180



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + N G  +L       +TL  + + +N I   G  AL+ A   N  L+HL+L  N + 
Sbjct: 21  NAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQALCRNTTLKHLDLTANLLH 80

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA  +  A+ +  SL  L+L    +++  A ++ + L  N TL  ++L  N I  +G 
Sbjct: 81  DQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGA 140

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             +  A+K  T L  + +     G +G + +
Sbjct: 141 SSVAGALKVNTTLTALYLQVASIGSQGAQAL 171



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 65/133 (48%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + + +N I   G  AL+ A   N  L+HL+L  N +  +GA  +  A+ +  SL 
Sbjct: 39  QTLSSLNLRENSISPEGAQALAQALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLT 98

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L    +++  A ++ + L  N TL  ++L  N I  +G   +  A+K  T L  + +
Sbjct: 99  HLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYL 158

Query: 130 SENQFGEEGVEEM 142
                G +G + +
Sbjct: 159 QVASIGSQGAQAL 171



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 1/110 (0%)

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL++A + N+ L +L+L  N I+  G   L +AL    +L+ LNL +  +   GA ++A+
Sbjct: 2   ALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQ 61

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            L  NTTL+ ++LT N +  QG   +  A+     L  +++  N F + G
Sbjct: 62  ALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWN-FIQAG 110



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 1/110 (0%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           AL++A + N+ L +L+L  N I+  G   L +AL    +L+ LNL +  +   GA ++A+
Sbjct: 2   ALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTLSSLNLRENSISPEGAQALAQ 61

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
            L  NTTL+ ++LT N +  QG   +  A+     L  +++  N F + G
Sbjct: 62  ALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWN-FIQAG 110



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 26/184 (14%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC-FALEELKLNNNGLGITGCKLLSKA 278
           +LK    L  LDL  NA    GV   A L+R+ C    L  L L  N +   G + L++A
Sbjct: 6   ALKVNQGLENLDLQSNAISNTGV---AVLMRALCTNQTLSSLNLRENSISPEGAQALAQA 62

Query: 279 LHDCYESSKKE--------------------GSPLALKVFIAGRNRLENEGAKMLAAVFK 318
           L  C  ++ K                     G   +L       N ++   A+ L    +
Sbjct: 63  L--CRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLHLQWNFIQAGAARALGQALQ 120

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
             +TL  +++ +N I   G ++++ A + N  L  L L   +I  +GA  LG+AL+   +
Sbjct: 121 LNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVASIGSQGAQALGEALAVNRT 180

Query: 379 LAIL 382
           L IL
Sbjct: 181 LEIL 184


>gi|399498062|emb|CCG20359.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497956|emb|CCG20306.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|380007855|gb|AFD29894.1| nucleotide-binding oligomerization domain 1 protein [Paralichthys
           olivaceus]
 gi|380007857|gb|AFD29895.1| nucleotide-binding oligomerization domain 1 protein [Paralichthys
           olivaceus]
          Length = 939

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 10/189 (5%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            +E L L NN +   G KL+++ + +C +          L+V   G+N++ + G + LA+
Sbjct: 743 VVEVLGLYNNHITDVGAKLVAQIIEECPK----------LRVVKIGKNKITSVGGRYLAS 792

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
             +K  ++  V M  N I   G  A ++A   +  L +L+L+ N IT KG   L +AL +
Sbjct: 793 AIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEALKE 852

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L I  L    L    A   A+ +  NT L  + L  N+ SV G   L +A+ + + L
Sbjct: 853 NSTLRIFWLVQNELTDDAAPHFAELVKVNTGLTHLWLINNQFSVHGIKHLAEALTHNSAL 912

Query: 436 KQINVSENQ 444
           K+I V  NQ
Sbjct: 913 KEICVKGNQ 921



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 15/233 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L+   RL+ +D+ +N     GV+ L    R S C  +  ++L  N L  +  ++L++ L 
Sbjct: 685 LQHRQRLLGVDMDNNNISDYGVKQL----RPSFC-KITVVRLCVNQLSDSSIEVLAEEL- 738

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
            C            ++V     N + + GAK++A + ++   L  V++ +N I  VG   
Sbjct: 739 -CKHK--------VVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKITSVGGRY 789

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L+ A +++ ++  + +  N+I  +GA    +AL   P L  L+L    + S G   +++ 
Sbjct: 790 LASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEA 849

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           L +N+TL    L  NE++        + +K  T L  + +  NQF   G++ +
Sbjct: 850 LKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLTHLWLINNQFSVHGIKHL 902



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 66/132 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+  +K  ++  V M  N I   G  A ++A   + KL +L+L+ N IT KG   L +A
Sbjct: 790 LASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEA 849

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L I  L    L    A   A+ +  NT L  + L  N+ SV G   L +A+ + 
Sbjct: 850 LKENSTLRIFWLVQNELTDDAAPHFAELVKVNTGLTHLWLINNQFSVHGIKHLAEALTHN 909

Query: 122 TKLKQINVSENQ 133
           + LK+I V  NQ
Sbjct: 910 SALKEICVKGNQ 921



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 77/156 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N+L +   ++LA    K K +E + +  N I  VG   ++   EE   LR + +  N IT
Sbjct: 724 NQLSDSSIEVLAEELCKHKVVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKIT 783

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   L  A+ K  S+  + +    +   GA + A+ L ++  L +++L+ N I+ +GG
Sbjct: 784 SVGGRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGG 843

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             L +A+K  + L+   + +N+  ++      +L+K
Sbjct: 844 KLLSEALKENSTLRIFWLVQNELTDDAAPHFAELVK 879



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 73/147 (49%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA    K K +E + +  N I  VG   ++   EE  KLR + +  N IT  G   L  
Sbjct: 733 VLAEELCKHKVVEVLGLYNNHITDVGAKLVAQIIEECPKLRVVKIGKNKITSVGGRYLAS 792

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A+ K  S+  + +    +   GA + A+ L ++  L +++L+ N I+ +GG  L +A+K 
Sbjct: 793 AIQKSSSIFDVGMWGNSIGDEGAEAFAEALRNHPKLTNLSLSANGITSKGGKLLSEALKE 852

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
            + L+   + +N+  ++      +L+K
Sbjct: 853 NSTLRIFWLVQNELTDDAAPHFAELVK 879



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 69/142 (48%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A + ++   L  V++ +N I  VG   L+ A +++  +  + +  N+I  +GA    +
Sbjct: 761 LVAQIIEECPKLRVVKIGKNKITSVGGRYLASAIQKSSSIFDVGMWGNSIGDEGAEAFAE 820

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL   P L  L+L    + S G   +++ L +N+TL    L  NE++        + +K 
Sbjct: 821 ALRNHPKLTNLSLSANGITSKGGKLLSEALKENSTLRIFWLVQNELTDDAAPHFAELVKV 880

Query: 121 KTKLKQINVSENQFGEEGVEEM 142
            T L  + +  NQF   G++ +
Sbjct: 881 NTGLTHLWLINNQFSVHGIKHL 902


>gi|399497986|emb|CCG20321.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 125/283 (44%), Gaps = 51/283 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL- 382
           ++++  N         L  A  +++NL  + L+   +  +G I +  AL    PSLA+L 
Sbjct: 330 KLDLRDNMFGPEAGLVLCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVLE 389

Query: 383 ---------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
                                      +LG+  LK  GA  IAK L  ++ L +V+++ N
Sbjct: 390 MAGSDITAEAASAIASCIAAKQLLAKLSLGENELKDGGAIQIAKALEGHSHLIEVDMSSN 449

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 450 ALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDGGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEEG 138
           N FG E 
Sbjct: 336 NMFGPEA 342


>gi|386333663|ref|YP_006029833.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
 gi|334196112|gb|AEG69297.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
          Length = 629

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 193/482 (40%), Gaps = 96/482 (19%)

Query: 6   FKKLKTLEHVEMPQNGIYHV--------GITALSDAFEENKKLRHLNLNDNTITYKGAIP 57
           FK   TLE ++    G+ H+        G++    A    + L+ L+LN   I  +GA  
Sbjct: 151 FKGALTLEALKALPPGVEHLDISRCTGSGVSNAGLALLATRPLKSLSLNGIEIDAEGA-- 208

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
             + L+   SL  L+L  C +    A+++A+    + ++  ++L+ N I   G   L  A
Sbjct: 209 --RLLATCTSLTSLSLTGCSIGDRAATALAR----SRSIASLDLSVNMIGPDGARALAGA 262

Query: 118 -------------------MKNKTKLKQINVSENQFGEEGVEEME--KLMKSFGMAAALV 156
                              +     LK +N S N  G+ GV       ++    +A  ++
Sbjct: 263 PLASLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNAVLTQLNLAGNMI 322

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN-TSN 215
                           +   N S  E D S     D+     A+N+S  + N  HN   +
Sbjct: 323 ----------GPAGARALRCNTSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGD 372

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
               +L     L  L+LS N   PIG  G   L  S+    L EL L         C + 
Sbjct: 373 DGTEALARNTTLKSLNLSYN---PIGFWGAGALGGSTT---LRELDLRC-------CAI- 418

Query: 276 SKALHDCYESSKKEGSPLALKVFIA----GRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
                D Y +S      LA    +A    G NR+ + GA+ +A      +TL  +++ +N
Sbjct: 419 -----DPYGASA-----LARNTSLASLHLGSNRIGDSGARAIATS----RTLTLLDLSRN 464

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
            I+  G  AL+     N +L  LNL  N +   GA     AL+  P L  LNLG   +  
Sbjct: 465 NIHDAGAQALAG----NGSLTSLNLYGNEVDDDGA----AALAHHPRLTSLNLGRNRIGP 516

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            GA  +AK    + TL +++L+ N I  +G      A+   T L  +NVS+N  GE+G  
Sbjct: 517 NGAQHLAK----SATLTELDLSENRIGPEG----ADALSLSTVLTTLNVSDNAIGEKGAR 568

Query: 452 EM 453
             
Sbjct: 569 AF 570



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 155/398 (38%), Gaps = 84/398 (21%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +    NGI   G+      F +N  L  LNL  N I   GA    +AL    SL  
Sbjct: 287 TLKSLNASNNGIGDAGVLG----FADNAVLTQLNLAGNMIGPAGA----RALRCNTSLTE 338

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    L  AGA    + L  N +L  +NL  NEI    G D  +A+   T LK +N+S
Sbjct: 339 LDLSTNRLGDAGA----QVLAANRSLTSLNLRHNEI----GDDGTEALARNTTLKSLNLS 390

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N  G             F  A AL      G  +  E D      +   A    S L+ 
Sbjct: 391 YNPIG-------------FWGAGAL-----GGSTTLRELDLRCCAIDPYGA----SALAR 428

Query: 191 NDSNHS-HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
           N S  S H  SN+  ++  ++  TS            L  LDLS N     G + LA   
Sbjct: 429 NTSLASLHLGSNRIGDSGARAIATSRT----------LTLLDLSRNNIHDAGAQALAG-- 476

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
                 +L  L L  N +   G   L  A H    S               GRNR+   G
Sbjct: 477 ----NGSLTSLNLYGNEVDDDGAAAL--AHHPRLTS------------LNLGRNRIGPNG 518

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           A+ LA    K  TL  +++ +N I   G    +DA   +  L  LN++DN I  KGA   
Sbjct: 519 AQHLA----KSATLTELDLSENRIGPEG----ADALSLSTVLTTLNVSDNAIGEKGARAF 570

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
            +  + L SL   N G   +  AG    AK L  NT L
Sbjct: 571 AEKSTSLTSLDARNNG---MGEAG----AKMLEANTRL 601


>gi|281201035|gb|EFA75249.1| hypothetical protein PPL_11324 [Polysphondylium pallidum PN500]
          Length = 811

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 215/478 (44%), Gaps = 37/478 (7%)

Query: 10  KTLEHVEMPQNGIYHVGITAL-SDAFEENKKLRHLNLNDNTI------TYKGAIPLGQAL 62
           +T+  +++  N +   G++ + SD    NK ++ LNL+ NT+      +  GA+   Q +
Sbjct: 70  QTIAKLDLSHNYLGPEGLSPIISDVIRSNKSIQWLNLSHNTLDQDENHSILGALLHNQTI 129

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL-DLVKAMKNK 121
           S L     L+  +  L S  +  + KY+  + +LE +N + N  S +  L  L KA+   
Sbjct: 130 SHLD----LSSNEYQLSSDVSKYLCKYIEQSLSLESLNFSKN--STRNPLCGLSKAIATN 183

Query: 122 TKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
           T LK I+++     ++  E++ E L  S  +++   +  D+   S   Q+      + + 
Sbjct: 184 TTLKSIDLNSMIISDQDSEQLIESLFNSKTISS---INLDQCILSSSNQNCYGNIISHNL 240

Query: 181 AEGDNS-NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKT--GARLVELDLSDNAF 237
           A   N  +L    S ++   + +   N      ++ Q  +S+K      L  L++    F
Sbjct: 241 AVRYNELDLIDEASKYNKAMTQEEEMNMLIDQLSNKQEEISMKCLDFTPLSYLNIGGINF 300

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNN----NGLGITGCKLLSKALH-------DCYESS 286
           G IG     D+L  +    + ++  N+    NG  I     L++++H       D YE++
Sbjct: 301 GKIGFPNFLDILARNQDLTILDVSSNHLQESNGDEIANFIRLNESIHTLNISDNDFYEAT 360

Query: 287 KKEGSPLALKVFIAGRN----RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
              G  LA    I   N    +  N   K+LA        ++ +++    + H GI   +
Sbjct: 361 VAIGEALAANKSITNLNISNTKSSNLIGKVLAKTLSTNHCIKILDISHTKLGHSGILDFA 420

Query: 343 DAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
                N   L  L++ND  +  KGAI +G++L    +L  L +    ++  GA +IAK L
Sbjct: 421 IGLSSNYITLEILSINDCDLQDKGAIHIGESLLSNVTLTQLYMNSNSIEKEGAKAIAKSL 480

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             NTTL+ ++L  N+I V+G   L  A+K+   L  ++V  N   E+G   + + +KS
Sbjct: 481 KRNTTLKTLHLGNNQIGVKGIKSLGSALKSNRTLLDLSVKSNSIQEKGGVNLAEYLKS 538



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 12/244 (4%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L T   +  LD+S    G  G+   A  L SS    LE L +N+  L   G   + ++L
Sbjct: 394 TLSTNHCIKILDISHTKLGHSGILDFAIGL-SSNYITLEILSINDCDLQDKGAIHIGESL 452

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      S + L       N +E EGAK +A   K+  TL+ + +  N I   GI 
Sbjct: 453 L----------SNVTLTQLYMNSNSIEKEGAKAIAKSLKRNTTLKTLHLGNNQIGVKGIK 502

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           +L  A + N+ L  L++  N+I  KG + L + L    SL  LNL    L +   +++ K
Sbjct: 503 SLGSALKSNRTLLDLSVKSNSIQEKGGVNLAEYLKSNNSLEYLNLRGNYLGNKAGNALIK 562

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  N  L +++++ N +       +  A K    +  +N+S+ +     ++   + M S
Sbjct: 563 LLGQNQFLINIDVSHNPMDKDLTQRIASAQKKNQYITSMNISQTEMESISIDS-PRFMAS 621

Query: 460 FGMA 463
            G +
Sbjct: 622 GGTS 625



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 5/126 (3%)

Query: 21  GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 80
           G  H+G + LS     N  L  L +N N+I  +GA  + ++L +  +L  L+LG+  +  
Sbjct: 444 GAIHIGESLLS-----NVTLTQLYMNSNSIEKEGAKAIAKSLKRNTTLKTLHLGNNQIGV 498

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
            G  S+   L  N TL D+++  N I  +GG++L + +K+   L+ +N+  N  G +   
Sbjct: 499 KGIKSLGSALKSNRTLLDLSVKSNSIQEKGGVNLAEYLKSNNSLEYLNLRGNYLGNKAGN 558

Query: 141 EMEKLM 146
            + KL+
Sbjct: 559 ALIKLL 564



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 67/137 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + M  N I   G  A++ + + N  L+ L+L +N I  KG   LG AL    +L  
Sbjct: 457 TLTQLYMNSNSIEKEGAKAIAKSLKRNTTLKTLHLGNNQIGVKGIKSLGSALKSNRTLLD 516

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L++    ++  G  ++A+YL  N +LE +NL  N +  + G  L+K +     L  I+VS
Sbjct: 517 LSVKSNSIQEKGGVNLAEYLKSNNSLEYLNLRGNYLGNKAGNALIKLLGQNQFLINIDVS 576

Query: 131 ENQFGEEGVEEMEKLMK 147
            N   ++  + +    K
Sbjct: 577 HNPMDKDLTQRIASAQK 593



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 1/162 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+  TL+ + +  N I   GI +L  A + N+ L  L++  N+I  KG + L + 
Sbjct: 476 IAKSLKRNTTLKTLHLGNNQIGVKGIKSLGSALKSNRTLLDLSVKSNSIQEKGGVNLAEY 535

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL  LNL    L +   +++ K L  N  L +++++ N +       +  A K  
Sbjct: 536 LKSNNSLEYLNLRGNYLGNKAGNALIKLLGQNQFLINIDVSHNPMDKDLTQRIASAQKKN 595

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGE 163
             +  +N+S+ +     ++   + M S G +        EG+
Sbjct: 596 QYITSMNISQTEMESISIDS-PRFMASGGTSLFSYTTQSEGD 636


>gi|320167613|gb|EFW44512.1| hypothetical protein CAOG_02537 [Capsaspora owczarzaki ATCC 30864]
          Length = 302

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 82/166 (49%)

Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
           + + V +   NR+ + GA+ LA   K  KTL  + +  N I   G  A+++A + NK L 
Sbjct: 48  VTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGDAGALAIAEALKVNKRLT 107

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
            LNL +N I   G   +  AL    +L +L LG   + S GA +IA  L  N TL ++  
Sbjct: 108 SLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNPIGSTGAQAIADSLKVNNTLTELYF 167

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             N+I   G   +  A++  + L  + + +NQFG  G   + + ++
Sbjct: 168 FRNQIGDAGAQAIADALEVNSTLTTLILEKNQFGNAGATAIAEALR 213



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 79/163 (48%)

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           A+ +A  FK   T+  + +  N I   G  AL++A + NK L  L L+DN I   GA+ +
Sbjct: 37  AQAIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGDAGALAI 96

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            +AL     L  LNL +  +  AG  +IA  L  NTTLE + L  N I   G   +  ++
Sbjct: 97  AEALKVNKRLTSLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNPIGSTGAQAIADSL 156

Query: 430 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           K    L ++    NQ G+ G + +   ++       L+LE ++
Sbjct: 157 KVNNTLTELYFFRNQIGDAGAQAIADALEVNSTLTTLILEKNQ 199



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 77/160 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A  FK   T+  + +  N I   G  AL++A + NK L  L L+DN I   GA+ + +A
Sbjct: 40  IAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGDAGALAIAEA 99

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  LNL +  +  AG  +IA  L  NTTLE + L  N I   G   +  ++K  
Sbjct: 100 LKVNKRLTSLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNPIGSTGAQAIADSLKVN 159

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             L ++    NQ G+ G + +   ++       L+LE ++
Sbjct: 160 NTLTELYFFRNQIGDAGAQAIADALEVNSTLTTLILEKNQ 199



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 16/194 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK   RL  L+L +N  G  G + +A+ L+ +    LE L L  N +G TG + ++ +L
Sbjct: 99  ALKVNKRLTSLNLVENQIGDAGGQAIANALKVNTT--LEMLYLGRNPIGSTGAQAIADSL 156

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K   +   L  F   RN++ + GA+ +A   +   TL  + + +N   + G T
Sbjct: 157 -------KVNNTLTELYFF---RNQIGDAGAQAIADALEVNSTLTTLILEKNQFGNAGAT 206

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD--CLLKSAGASS- 396
           A+++A   N  L  LNL+ N I   GA  + +A +   +L  L   D  C++ +  A S 
Sbjct: 207 AIAEALRVNTTLTELNLSQNAIADAGAQMIAEAFNINKTLTTLKYVDSCCIVPNVSAFSP 266

Query: 397 -IAKYLTDNTTLED 409
            +  Y+T+ ++LED
Sbjct: 267 ELENYVTEISSLED 280



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  KTL  + +  N I   G  A+++A + NK+L  LNL +N I   G   +  A
Sbjct: 68  LAEALKVNKTLTGLYLSDNHIGDAGALAIAEALKVNKRLTSLNLVENQIGDAGGQAIANA 127

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L +L LG   + S GA +IA  L  N TL ++    N+I   G   +  A++  
Sbjct: 128 LKVNTTLEMLYLGRNPIGSTGAQAIADSLKVNNTLTELYFFRNQIGDAGAQAIADALEVN 187

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + L  + + +NQFG  G   + + ++
Sbjct: 188 STLTTLILEKNQFGNAGATAIAEALR 213



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 15/223 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           + K    +  L L +N  G  G + LA+ L+ +    L  L L++N +G  G   +++AL
Sbjct: 43  AFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKT--LTGLYLSDNHIGDAGALAIAEAL 100

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L L       N++ + G + +A   K   TLE + + +N I   G  
Sbjct: 101 K-----VNKRLTSLNLV-----ENQIGDAGGQAIANALKVNTTLEMLYLGRNPIGSTGAQ 150

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++D+ + N  L  L    N I   GA  +  AL    +L  L L      +AGA++IA+
Sbjct: 151 AIADSLKVNNTLTELYFFRNQIGDAGAQAIADALEVNSTLTTLILEKNQFGNAGATAIAE 210

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAM---KNKTKLKQIN 439
            L  NTTL ++NL+ N I+  G   + +A    K  T LK ++
Sbjct: 211 ALRVNTTLTELNLSQNAIADAGAQMIAEAFNINKTLTTLKYVD 253



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A++ AF+ N  +  L L++N I   GA  L +AL    +L  L L D  +  AGA +IA+
Sbjct: 39  AIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGDAGALAIAE 98

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            L  N  L  +NL  N+I   GG  +  A+K  T L+ + +  N  G  G + +   +K
Sbjct: 99  ALKVNKRLTSLNLVENQIGDAGGQAIANALKVNTTLEMLYLGRNPIGSTGAQAIADSLK 157



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TLE + + +N I   G  A++D+ + N  L  L    N I   GA  +  A
Sbjct: 124 IANALKVNTTLEMLYLGRNPIGSTGAQAIADSLKVNNTLTELYFFRNQIGDAGAQAIADA 183

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM--- 118
           L    +L  L L      +AGA++IA+ L  NTTL ++NL+ N I+  G   + +A    
Sbjct: 184 LEVNSTLTTLILEKNQFGNAGATAIAEALRVNTTLTELNLSQNAIADAGAQMIAEAFNIN 243

Query: 119 KNKTKLKQIN 128
           K  T LK ++
Sbjct: 244 KTLTTLKYVD 253



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 101/278 (36%), Gaps = 59/278 (21%)

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           A A +IA+    N T+  + L  N I   G   L +A+K    L  + +S+N  G+ G  
Sbjct: 35  AEAQAIAQAFKVNVTVTVLMLDNNRIGSAGAQALAEALKVNKTLTGLYLSDNHIGDAGAL 94

Query: 141 EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS 200
            + + +K      +L L +                                  N   +A 
Sbjct: 95  AIAEALKVNKRLTSLNLVE----------------------------------NQIGDAG 120

Query: 201 NQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEEL 260
            Q+  N+             LK    L  L L  N  G  G + +AD L+ +    L EL
Sbjct: 121 GQAIANA-------------LKVNTTLEMLYLGRNPIGSTGAQAIADSLKVNNT--LTEL 165

Query: 261 KLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
               N +G  G    ++A+ D  E +        L   I  +N+  N GA  +A   +  
Sbjct: 166 YFFRNQIGDAG----AQAIADALEVNS------TLTTLILEKNQFGNAGATAIAEALRVN 215

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND 358
            TL  + + QN I   G   +++AF  NK L  L   D
Sbjct: 216 TTLTELNLSQNAIADAGAQMIAEAFNINKTLTTLKYVD 253


>gi|399497980|emb|CCG20318.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497970|emb|CCG20313.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPPTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITVEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPPTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL--PS-- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L  P+  
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPPTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497850|emb|CCG20253.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G++L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSKLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  +L    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 29/136 (21%)

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL 376
            S+A E +K L+ LNL+DN +  KG    G+                        A+S+L
Sbjct: 207 FSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSEL 265

Query: 377 -PS---LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
            PS   L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   
Sbjct: 266 VPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMC 325

Query: 433 TKLKQINVSENQFGEE 448
           + LK++++ +N FG E
Sbjct: 326 SHLKKLDLRDNMFGPE 341


>gi|166796047|ref|NP_001107749.1| nucleotide-binding oligomerization domain-containing protein 1 [Sus
           scrofa]
 gi|164562263|gb|ABY61043.1| nucleotide-binding oligomerization domain containing 1 [Sus scrofa]
          Length = 953

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 111/238 (46%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L + L          L L NN +   G + +++ L +C  
Sbjct: 728 SRLTVIRLSVNQITDSGVKVLYEELTKYKIVTF--LGLYNNQITDVGARYVARILDECK- 784

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
                     LK    G+N++ +EG K LA   K  +++  V M  N I   G  A ++A
Sbjct: 785 ---------GLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L +L+L  N I+ +G   L QAL +  SL I  L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A++N T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITARGTARLADALQNNTGIMEICLNGNLIKPEEAKVFEDEKRIVCF 953



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +  +G K+L       YE   K      L ++    N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDSGVKVL-------YEELTKYKIVTFLGLY---NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +A +  + K L+ +++ +N I   G   L+ A + ++++  + +  N I  +GA    +A
Sbjct: 776 VARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G   +A+ L  N +L    LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ    G   +
Sbjct: 896 QTLKHLWLIQNQITARGTARL 916



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +++  V M  N I   G  A ++A   +  L +L+L  N I+ +G   L QA
Sbjct: 804 LARAVKNSRSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKGLAQA 863

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL I  L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 864 LQQNASLRIFWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITARGTARLADALQNN 923

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 924 TGIMEICLNGNLIKPEEAKVFEDEKRIVCF 953



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +A+ L +   L+ + L  N+I+ +GG  L +A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  + K L+ +++ +N I   G   L+ A + ++ +  + +  N I  +GA    +A
Sbjct: 776 VARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEA 835

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    + + G   +A+ L  N +L    LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKGLAQALQQNASLRIFWLTQNELDDEVAESLAEMLKVN 895

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             LK + + +NQ    G   +
Sbjct: 896 QTLKHLWLIQNQITARGTARL 916


>gi|440793719|gb|ELR14895.1| calponin domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 785

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 86/163 (52%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L+V   G+N++ + GA  +A    K+K+LE + + +N I   G  AL+ A     +LR +
Sbjct: 579 LRVLKLGKNKISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVV 638

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
           +L+ + ++ KGA  +  AL++   L  L L    +   GA ++A  L   T LE ++L  
Sbjct: 639 DLSASKVSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRRTALESIHLGG 698

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           N IS +G   +  A+K   K+  +++S N+ G  G   + +++
Sbjct: 699 NGISDEGAQAIAAALKENDKITHVDLSANKLGNAGASHIRQVL 741



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 48/189 (25%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALH----------DCYESSKKEGSPLA--------LKV 297
           +LEEL LN N +G  G   L++AL              + S K  + +A        L  
Sbjct: 606 SLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASKVSDKGAAAIAGALTEEHGLGS 665

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
            I  RN + +EGA+ LAA+ ++   LE + +  NGI   G  A++ A +EN  + H++L+
Sbjct: 666 LILSRNAITDEGAQALAALLRRRTALESIHLGGNGISDEGAQAIAAALKENDKITHVDLS 725

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N                             L +AGAS I + L DN  LE VNL+ N++
Sbjct: 726 ANK----------------------------LGNAGASHIRQVLDDNEVLEGVNLSENKL 757

Query: 418 SVQGGLDLV 426
             Q G DL 
Sbjct: 758 --QCGADLA 764



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 81/154 (52%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           LE+   + LA     L  L  +++ +N I   G  A+++A  + K+L  L LN+N I  +
Sbjct: 561 LEDNDVRRLAPALAALTHLRVLKLGKNKISSAGAAAVAEALPKMKSLEELYLNENEIGDE 620

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           GA  L QAL+   SL +++L    +   GA++IA  LT+   L  + L+ N I+ +G   
Sbjct: 621 GADALAQALAHKSSLRVVDLSASKVSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQA 680

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L   ++ +T L+ I++  N   +EG + +   +K
Sbjct: 681 LAALLRRRTALESIHLGGNGISDEGAQAIAAALK 714



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 71/143 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + +EGA  LA       +L  V++  + +   G  A++ A  E   L  L L+ N IT
Sbjct: 615 NEIGDEGADALAQALAHKSSLRVVDLSASKVSDKGAAAIAGALTEEHGLGSLILSRNAIT 674

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA  L   L +  +L  ++LG   +   GA +IA  L +N  +  V+L+ N++   G 
Sbjct: 675 DEGAQALAALLRRRTALESIHLGGNGISDEGAQAIAAALKENDKITHVDLSANKLGNAGA 734

Query: 423 LDLVKAMKNKTKLKQINVSENQF 445
             + + + +   L+ +N+SEN+ 
Sbjct: 735 SHIRQVLDDNEVLEGVNLSENKL 757



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 76/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA     L  L  +++ +N I   G  A+++A  + K L  L LN+N I  +GA  L QA
Sbjct: 569 LAPALAALTHLRVLKLGKNKISSAGAAAVAEALPKMKSLEELYLNENEIGDEGADALAQA 628

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L+   SL +++L    +   GA++IA  LT+   L  + L+ N I+ +G   L   ++ +
Sbjct: 629 LAHKSSLRVVDLSASKVSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAALLRRR 688

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L+ I++  N   +EG + +   +K
Sbjct: 689 TALESIHLGGNGISDEGAQAIAAALK 714



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 65/133 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA       +L  V++  + +   G  A++ A  E   L  L L+ N IT +GA  L   
Sbjct: 625 LAQALAHKSSLRVVDLSASKVSDKGAAAIAGALTEEHGLGSLILSRNAITDEGAQALAAL 684

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  +L  ++LG   +   GA +IA  L +N  +  V+L+ N++   G   + + + + 
Sbjct: 685 LRRRTALESIHLGGNGISDEGAQAIAAALKENDKITHVDLSANKLGNAGASHIRQVLDDN 744

Query: 122 TKLKQINVSENQF 134
             L+ +N+SEN+ 
Sbjct: 745 EVLEGVNLSENKL 757



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 30/114 (26%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA+ ++   LE + +  NGI   G  A++ A +EN K+ H++L+ N             
Sbjct: 681 LAALLRRRTALESIHLGGNGISDEGAQAIAAALKENDKITHVDLSANK------------ 728

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
                           L +AGAS I + L DN  LE VNL+ N++  Q G DL 
Sbjct: 729 ----------------LGNAGASHIRQVLDDNEVLEGVNLSENKL--QCGADLA 764



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 63/114 (55%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
            + AL+     N +L+ L+L +  +       L  AL+ L  L +L LG   + SAGA++
Sbjct: 537 ALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALTHLRVLKLGKNKISSAGAAA 596

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           +A+ L    +LE++ L  NEI  +G   L +A+ +K+ L+ +++S ++  ++G 
Sbjct: 597 VAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASKVSDKGA 650



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 62/114 (54%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            + AL+     N  L+ L+L +  +       L  AL+ L  L +L LG   + SAGA++
Sbjct: 537 ALRALTAVLAHNYHLKTLSLENAELEDNDVRRLAPALAALTHLRVLKLGKNKISSAGAAA 596

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           +A+ L    +LE++ L  NEI  +G   L +A+ +K+ L+ +++S ++  ++G 
Sbjct: 597 VAEALPKMKSLEELYLNENEIGDEGADALAQALAHKSSLRVVDLSASKVSDKGA 650


>gi|123470202|ref|XP_001318308.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121901064|gb|EAY06085.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 610

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 16/244 (6%)

Query: 213 TSNQSHM---SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
           T+  +HM   SL     L  L+L+ N  G  G+E +   L+     +LE + L+ N +  
Sbjct: 114 TTEGAHMIGVSLTNNDSLTYLNLASNDLGAKGIEAM---LKEGSFGSLETIILSKNLINC 170

Query: 270 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
           +  KLL   +           S   L+      N+L  +    L ++  +   LE + + 
Sbjct: 171 SISKLLCNRIL----------SAPKLRHIDLSDNQLNEKFLTRLESIMNQGCKLESINLA 220

Query: 330 QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 389
           +N I H  + AL         L+ L L+ N +  +G   +   L K  SL  ++  +C L
Sbjct: 221 RNNIGHESLYALEMLIRSLTCLKKLILSGNPLKDEGIAQIKDYLIKNKSLVQIDFSNCGL 280

Query: 390 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           + AGA +IA+ +  N TLE +N++ N I  +GG+ + K++   T + +I + +N+  ++ 
Sbjct: 281 RDAGAKTIAEIIIGNKTLEIINISSNVIGNEGGISIAKSLLANTTISEIYIRDNELKDDA 340

Query: 450 VEEM 453
             E 
Sbjct: 341 AYEF 344



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 68/131 (51%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + + +N I H  + AL         L+ L L+ N +  +G   +   L K  SL  +
Sbjct: 214 LESINLARNNIGHESLYALEMLIRSLTCLKKLILSGNPLKDEGIAQIKDYLIKNKSLVQI 273

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  +C L+ AGA +IA+ +  N TLE +N++ N I  +GG+ + K++   T + +I + +
Sbjct: 274 DFSNCGLRDAGAKTIAEIIIGNKTLEIINISSNVIGNEGGISIAKSLLANTTISEIYIRD 333

Query: 132 NQFGEEGVEEM 142
           N+  ++   E 
Sbjct: 334 NELKDDAAYEF 344



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 69/145 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  + + L  L+ + +  N +   GI  + D   +NK L  ++ ++  +   GA  + + 
Sbjct: 232 LEMLIRSLTCLKKLILSGNPLKDEGIAQIKDYLIKNKSLVQIDFSNCGLRDAGAKTIAEI 291

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +    +L I+N+   ++ + G  SIAK L  NTT+ ++ +  NE+      + V ++ + 
Sbjct: 292 IIGNKTLEIINISSNVIGNEGGISIAKSLLANTTISEIYIRDNELKDDAAYEFVNSISHS 351

Query: 122 TKLKQINVSENQFGEEGVEEMEKLM 146
             +  I+++ N F    ++   K +
Sbjct: 352 MNIVTIDLAYNDFSYTALDSWNKCL 376



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 87/438 (19%), Positives = 157/438 (35%), Gaps = 122/438 (27%)

Query: 54  GAIPLGQALSKLPSLAILNLGD---------------------CL-------------LK 79
           GAI + + L   P+L  L+L                       C+             L 
Sbjct: 27  GAISIAKYLEADPNLISLDLRSAGINIVGTKVIFTALQNNNHLCIINLSAIDGTNRNRLD 86

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           + G+  +A+ L +N  L ++N++   ++ +G   +  ++ N   L  +N++ N  G +G+
Sbjct: 87  TDGSRGLARCLYNNKILTEINVSLCSVTTEGAHMIGVSLTNNDSLTYLNLASNDLGAKGI 146

Query: 140 EEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNA 199
           E M K   SFG    ++L  +   CS  +                N  LS     H   +
Sbjct: 147 EAMLK-EGSFGSLETIILSKNLINCSISKL-------------LCNRILSAPKLRHIDLS 192

Query: 200 SNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEE 259
            NQ     N+   T  +S M+   G +L  ++L+ N  G   +  L  L+RS  C     
Sbjct: 193 DNQ----LNEKFLTRLESIMN--QGCKLESINLARNNIGHESLYALEMLIRSLTC----- 241

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
                                              LK  I   N L++EG   +     K
Sbjct: 242 -----------------------------------LKKLILSGNPLKDEGIAQIKDYLIK 266

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            K+L +++    G+   G   +++    NK L  +N++ N I  +G I            
Sbjct: 267 NKSLVQIDFSNCGLRDAGAKTIAEIIIGNKTLEIINISSNVIGNEGGI------------ 314

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
                           SIAK L  NTT+ ++ +  NE+      + V ++ +   +  I+
Sbjct: 315 ----------------SIAKSLLANTTISEIYIRDNELKDDAAYEFVNSISHSMNIVTID 358

Query: 440 VSENQFGEEGVEEMEKLM 457
           ++ N F    ++   K +
Sbjct: 359 LAYNDFSYTALDSWNKCL 376



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 64/150 (42%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L H+++  N +    +T L     +  KL  +NL  N I ++    L   +  L  L  L
Sbjct: 186 LRHIDLSDNQLNEKFLTRLESIMNQGCKLESINLARNNIGHESLYALEMLIRSLTCLKKL 245

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            L    LK  G + I  YL  N +L  ++ +   +   G   + + +     L+ IN+S 
Sbjct: 246 ILSGNPLKDEGIAQIKDYLIKNKSLVQIDFSNCGLRDAGAKTIAEIIIGNKTLEIINISS 305

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           N  G EG   + K + +    + + + D+E
Sbjct: 306 NVIGNEGGISIAKSLLANTTISEIYIRDNE 335


>gi|399497940|emb|CCG20298.1| Ran GTPase activating protein 2 [Solanum chacoense]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|118366745|ref|XP_001016588.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89298355|gb|EAR96343.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 897

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 11/234 (4%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           + + EL +S N  G +G+    D+   S  + LE L L+ N       K+ ++ L   ++
Sbjct: 455 SNITELYMSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQN-------KITTRGLAGFFQ 507

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
           S  K  +   L   I   N  +      +A    +   ++ +   +  I   G+++++  
Sbjct: 508 SMHKNQN---LHKLILNDNNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSIAYG 564

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            E+NKNL +LNL +N +  +GA  L +ALS    L +L+L  C ++  G  ++A  LT  
Sbjct: 565 LEKNKNLTYLNLKENKVRNQGAKSLAEALSHKSHLQVLDLSLCKIEDEGGMALAAALTK- 623

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           ++L  +NL  N +    G  +  +++  T +++INV  N       E+++K ++
Sbjct: 624 SSLYSLNLRENSLHDCVGALICSSLEKNTYIRKINVERNPINYSYQEKIKKSLQ 677



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 66/301 (21%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK----LNNNGLGITGCKLLS 276
           L+  + L+ LD+S N  GP G E L   L  +C     ++     LN N +G  G   L 
Sbjct: 334 LQVNSSLIHLDVSGNNIGPEGFEVLFRSLIYNCTLISLDVASKDGLNRNRIGQIGADQLE 393

Query: 277 KALHDCYESSKKE----GSPL---ALKVFIAG-------------RNRLENEGAKMLAA- 315
           K L   + SS +     G+ +    LK+ + G             +N L++  A+++ + 
Sbjct: 394 KLLR--FNSSIQFLNLCGTSINNDQLKLIMKGLNDGKSLTMIDISQNDLDSNAAEIIVSN 451

Query: 316 ----------------------------VFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
                                       +  KL  LE +++ QN I   G+     +  +
Sbjct: 452 IQNSNITELYMSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNKITTRGLAGFFQSMHK 511

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
           N+NL  L LNDN         + + L +   +  L+   C ++  G SSIA  L  N  L
Sbjct: 512 NQNLHKLILNDNNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSIAYGLEKNKNL 571

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 467
             +NL  N++  QG   L +A+ +K+ L+ +++S  +  +EG           GMA A  
Sbjct: 572 TYLNLKENKVRNQGAKSLAEALSHKSHLQVLDLSLCKIEDEG-----------GMALAAA 620

Query: 468 L 468
           L
Sbjct: 621 L 621



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 74/136 (54%), Gaps = 1/136 (0%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++H+   +  I   G+++++   E+NK L +LNL +N +  +GA  L +ALS    L +L
Sbjct: 543 IQHLSFERCEIQPEGVSSIAYGLEKNKNLTYLNLKENKVRNQGAKSLAEALSHKSHLQVL 602

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L  C ++  G  ++A  LT  ++L  +NL  N +    G  +  +++  T +++INV  
Sbjct: 603 DLSLCKIEDEGGMALAAALTK-SSLYSLNLRENSLHDCVGALICSSLEKNTYIRKINVER 661

Query: 132 NQFGEEGVEEMEKLMK 147
           N       E+++K ++
Sbjct: 662 NPINYSYQEKIKKSLQ 677



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           KL  LE +++ QN I   G+     +  +N+ L  L LNDN         + + L +   
Sbjct: 483 KLYPLETLDLSQNKITTRGLAGFFQSMHKNQNLHKLILNDNNFQGIQMNKIAEFLHENTG 542

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           +  L+   C ++  G SSIA  L  N  L  +NL  N++  QG   L +A+ +K+ L+ +
Sbjct: 543 IQHLSFERCEIQPEGVSSIAYGLEKNKNLTYLNLKENKVRNQGAKSLAEALSHKSHLQVL 602

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
           ++S  +  +EG           GMA A  L
Sbjct: 603 DLSLCKIEDEG-----------GMALAAAL 621



 Score = 44.7 bits (104), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 2   LAAVFKKL---KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
           LA  F+ +   + L  + +  N    + +  +++   EN  ++HL+     I  +G   +
Sbjct: 502 LAGFFQSMHKNQNLHKLILNDNNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSI 561

Query: 59  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
              L K  +L  LNL +  +++ GA S+A+ L+  + L+ ++L+  +I  +GG+ L  A+
Sbjct: 562 AYGLEKNKNLTYLNLKENKVRNQGAKSLAEALSHKSHLQVLDLSLCKIEDEGGMALAAAL 621

Query: 119 KNKTKLKQINVSEN 132
             K+ L  +N+ EN
Sbjct: 622 -TKSSLYSLNLREN 634



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 2/128 (1%)

Query: 17  MPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           M  N I  VG++   D    +K   L  L+L+ N IT +G     Q++ K  +L  L L 
Sbjct: 462 MSSNQIGDVGLSYFQDVGLHSKLYPLETLDLSQNKITTRGLAGFFQSMHKNQNLHKLILN 521

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           D   +    + IA++L +NT ++ ++    EI  +G   +   ++    L  +N+ EN+ 
Sbjct: 522 DNNFQGIQMNKIAEFLHENTGIQHLSFERCEIQPEGVSSIAYGLEKNKNLTYLNLKENKV 581

Query: 135 GEEGVEEM 142
             +G + +
Sbjct: 582 RNQGAKSL 589


>gi|399497860|emb|CCG20258.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G++L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSKLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  +L    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 29/136 (21%)

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL 376
            S+A E +K L+ LNL+DN +  KG    G+                        A+S+L
Sbjct: 207 FSEALEGSK-LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSEL 265

Query: 377 -PS---LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
            PS   L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   
Sbjct: 266 VPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMC 325

Query: 433 TKLKQINVSENQFGEE 448
           + LK++++ +N FG E
Sbjct: 326 SHLKKLDLRDNMFGPE 341


>gi|399498104|emb|CCG20380.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497938|emb|CCG20297.1| Ran GTPase activating protein 2 [Solanum chacoense]
 gi|399498100|emb|CCG20378.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|320170306|gb|EFW47205.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 501

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 90/171 (52%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++   GA+ +A   K  KTL  + + +N I   G  A+++A + N  L+ L L+ N I
Sbjct: 96  QNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEALKVNTTLKELRLDKNQI 155

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              G   + +AL    +L  LNL    +  AGA +IA+ L  N T++ ++L  N+I   G
Sbjct: 156 GDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNMTVQTLSLERNQIGDVG 215

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
              + KA++    +  +++ ENQ G+ G + + +++K     A L L +++
Sbjct: 216 ARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKVNATLAVLYLHENQ 266



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 75/143 (52%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
            ++ + L+H  +PQN I   G  A+++A + NK L  L L +N I   GA  + +AL   
Sbjct: 83  LERKRLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEALKVN 142

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
            +L  L L    +  AG  +IA+ L  N TL  +NL  N+I V G   + +A+K    ++
Sbjct: 143 TTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNMTVQ 202

Query: 126 QINVSENQFGEEGVEEMEKLMKS 148
            +++  NQ G+ G   + K +++
Sbjct: 203 TLSLERNQIGDVGARVIAKALEA 225



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 24/252 (9%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLR-----SSCCFALEELK---------LNNNG 266
           LK    L  L+L ++  G  G +  A+ L+     ++    LE L+         L  N 
Sbjct: 39  LKVNTTLTSLELMEHDIGNDGAKAFAEALKVNTTLTTLSIRLETLERKRLLKHSNLPQNQ 98

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           +G  G + +++AL    + +K       L + I   N++ + GA+ +A   K   TL+ +
Sbjct: 99  IGQGGAQAIAEAL----KVNK------TLTLLILRENQIGSAGAQAIAEALKVNTTLKEL 148

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
            + +N I   G  A+++A + NK L  LNL  N I   GA  + +AL +  ++  L+L  
Sbjct: 149 RLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNMTVQTLSLER 208

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
             +   GA  IAK L  N  +  ++L  N++   G   L + +K    L  + + ENQ G
Sbjct: 209 NQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKVNATLAVLYLHENQLG 268

Query: 447 EEGVEEMEKLMK 458
           + G +   + ++
Sbjct: 269 DAGAKAFAEALR 280



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 35/301 (11%)

Query: 27  ITALS---DAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 83
           +T LS   +  E  + L+H NL  N I   GA  + +AL    +L +L L +  + SAGA
Sbjct: 73  LTTLSIRLETLERKRLLKHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGA 132

Query: 84  SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            +IA+ L  NTTL+++ L  N+I   G   + +A+K    L ++N+  NQ G  G E + 
Sbjct: 133 QAIAEALKVNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIA 192

Query: 144 KLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQS 203
           + +K       L LE ++                     GD        +  ++ A    
Sbjct: 193 EALKRNMTVQTLSLERNQ--------------------IGDVGARVIAKALEANMAVTTL 232

Query: 204 HNNSNQSHNTSNQSHMS-LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKL 262
               NQ  +   Q     LK  A L  L L +N  G  G +  A+ LR +    ++ L L
Sbjct: 233 SLCENQLGDAGAQVLAEVLKVNATLAVLYLHENQLGDAGAKAFAEALRVN--MTVQRLDL 290

Query: 263 NNNGLGITGCKLLSKALH---DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
             N +G  G + + +A     +C  +  ++ +PL L +    R RL    A+ + AVF  
Sbjct: 291 TGNCIGNLGAQAIDEARQVNDECRVNIDRQINPLTLSL----RPRLAT--AEDIQAVFHL 344

Query: 320 L 320
           L
Sbjct: 345 L 345



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 83/160 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + + +N I   G  A+++A + N  L+ L L+ N I   G   + +A
Sbjct: 107 IAEALKVNKTLTLLILRENQIGSAGAQAIAEALKVNTTLKELRLDKNQIGDAGTKAIAEA 166

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL    +  AGA +IA+ L  N T++ ++L  N+I   G   + KA++  
Sbjct: 167 LKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNMTVQTLSLERNQIGDVGARVIAKALEAN 226

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             +  +++ ENQ G+ G + + +++K     A L L +++
Sbjct: 227 MAVTTLSLCENQLGDAGAQVLAEVLKVNATLAVLYLHENQ 266



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 47/308 (15%)

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK----------------NKTKL 124
           AGA +IA+ L  NTTL  + L  ++I   G     +A+K                 K  L
Sbjct: 30  AGAQAIAEGLKVNTTLTSLELMEHDIGNDGAKAFAEALKVNTTLTTLSIRLETLERKRLL 89

Query: 125 KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD 184
           K  N+ +NQ G+ G + + + +K       L+L +++   +  +   E+ + N +  E  
Sbjct: 90  KHSNLPQNQIGQGGAQAIAEALKVNKTLTLLILRENQIGSAGAQAIAEALKVNTTLKE-- 147

Query: 185 NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEG 244
                  D N   +A  ++                +LK    L +L+L  N  G  G E 
Sbjct: 148 ----LRLDKNQIGDAGTKAIAE-------------ALKMNKTLTKLNLIGNQIGVAGAEA 190

Query: 245 LADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNR 304
           +A+ L+ +    ++ L L  N +G  G ++++KAL           + +A+       N+
Sbjct: 191 IAEALKRN--MTVQTLSLERNQIGDVGARVIAKALE----------ANMAVTTLSLCENQ 238

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L + GA++LA V K   TL  + + +N +   G  A ++A   N  ++ L+L  N I   
Sbjct: 239 LGDAGAQVLAEVLKVNATLAVLYLHENQLGDAGAKAFAEALRVNMTVQRLDLTGNCIGNL 298

Query: 365 GAIPLGQA 372
           GA  + +A
Sbjct: 299 GAQAIDEA 306



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 231 DLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEG 290
           +L  N  G  G + +A+ L+ +    L  L L  N +G  G + +++AL           
Sbjct: 93  NLPQNQIGQGGAQAIAEALKVNKTLTL--LILRENQIGSAGAQAIAEALK---------- 140

Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
               LK     +N++ + G K +A   K  KTL ++ +  N I   G  A+++A + N  
Sbjct: 141 VNTTLKELRLDKNQIGDAGTKAIAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNMT 200

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           ++ L+L  N I   GA  + +AL    ++  L+L +  L  AGA  +A+ L  N TL  +
Sbjct: 201 VQTLSLERNQIGDVGARVIAKALEANMAVTTLSLCENQLGDAGAQVLAEVLKVNATLAVL 260

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            L  N++   G     +A++    +++++++ N  G  G + +++
Sbjct: 261 YLHENQLGDAGAKAFAEALRVNMTVQRLDLTGNCIGNLGAQAIDE 305



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 72/143 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I   G  A+++A + N  ++ L+L  N I   GA  + +A
Sbjct: 163 IAEALKMNKTLTKLNLIGNQIGVAGAEAIAEALKRNMTVQTLSLERNQIGDVGARVIAKA 222

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L+L +  L  AGA  +A+ L  N TL  + L  N++   G     +A++  
Sbjct: 223 LEANMAVTTLSLCENQLGDAGAQVLAEVLKVNATLAVLYLHENQLGDAGAKAFAEALRVN 282

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
             +++++++ N  G  G + +++
Sbjct: 283 MTVQRLDLTGNCIGNLGAQAIDE 305


>gi|399498070|emb|CCG20363.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 123/292 (42%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +SK +    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSKLVP--- 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G + L +
Sbjct: 268 -STEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+L+ N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 441 LIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+L+ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+SKL PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341


>gi|357486131|ref|XP_003613353.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
 gi|355514688|gb|AES96311.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula]
          Length = 355

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 12/232 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           EL L  N+ G  G+  L   L S     L  L + NN L   G   ++  +       KK
Sbjct: 92  ELHLHGNSIGDEGIRSLMTGLTSHKG-KLTLLDIGNNSLTAKGAFYVAGYI-------KK 143

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             S L L +++   N + +EGA+ LA   K+ +++  ++M  N I+ VG+ A++   ++N
Sbjct: 144 IKSLLWLNIYM---NDIGDEGAEKLADALKENRSITTLDMGGNNIHAVGVGAVAKVLKDN 200

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             +  L L+ N I   GA  L + +    ++  L LG C + + GA  IA  L  NTT+ 
Sbjct: 201 SVITTLELSYNPIGPDGAKALAEVIKFHGNVKTLKLGWCQIGAKGAEFIADALKYNTTIS 260

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 459
            ++L  N +  +G L L +++K   + L  +++  N+  ++G   + + +KS
Sbjct: 261 VLDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKS 312



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 167/393 (42%), Gaps = 65/393 (16%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+E +++    +   G  A+++  ++N  LR L LN+N I Y G   L  AL +  S+  
Sbjct: 5   TIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRN 64

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINV 129
           ++L      + G +++AK L  N ++ +++L  N I  +G   L+  +  +K KL  +++
Sbjct: 65  IHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDI 124

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
             N    +G   +   +K       L +  +D G       DE +E+  D          
Sbjct: 125 GNNSLTAKGAFYVAGYIKKIKSLLWLNIYMNDIG-------DEGAEKLAD---------- 167

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
                                          +LK    +  LD+  N    +GV  +A +
Sbjct: 168 -------------------------------ALKENRSITTLDMGGNNIHAVGVGAVAKV 196

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L+ +    +  L+L+ N +G  G K L++ +       K  G+   LK+   G  ++  +
Sbjct: 197 LKDNSV--ITTLELSYNPIGPDGAKALAEVI-------KFHGNVKTLKL---GWCQIGAK 244

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE-ENKNLRHLNLNDNTITYKGAI 367
           GA+ +A   K   T+  +++  NG+   G   L+ + +  N+ L  L+L  N I   GA 
Sbjct: 245 GAEFIADALKYNTTISVLDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAF 304

Query: 368 PLGQALSKLPSLAI--LNLGDCLLKSAGASSIA 398
            + QAL     +A+  LN+G   L   G S+++
Sbjct: 305 AIAQALKSNEDVAVTSLNIGSNFLTKFGQSALS 337



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K+ +++  ++M  N I+ VG+ A++   ++N  +  L L+ N I   GA  L + 
Sbjct: 165 LADALKENRSITTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEV 224

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +    ++  L LG C + + GA  IA  L  NTT+  ++L  N +  +G L L +++K  
Sbjct: 225 IKFHGNVKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDEGALCLARSLKVV 284

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKS 148
            + L  +++  N+  ++G   + + +KS
Sbjct: 285 NEALTSLDLGFNEIRDDGAFAIAQALKS 312



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 39/234 (16%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +E+L+LN+  LG  G K +++ L       KK  S   L+V     N +E  G   LA  
Sbjct: 6   IEKLQLNSADLGDEGAKAIAEML-------KKNSS---LRVLELNNNMIEYSGFTSLAGA 55

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI--------------- 361
             +  ++  + +  N    +G+ AL+ A E NK++R L+L+ N+I               
Sbjct: 56  LLENNSIRNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSH 115

Query: 362 --------------TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
                         T KGA  +   + K+ SL  LN+    +   GA  +A  L +N ++
Sbjct: 116 KGKLTLLDIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSI 175

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
             +++  N I   G   + K +K+ + +  + +S N  G +G + + +++K  G
Sbjct: 176 TTLDMGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEVIKFHG 229



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 19/289 (6%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQ 60
           LA   +  K++  + +  N I   GI +L      +K KL  L++ +N++T KGA  +  
Sbjct: 80  LAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDIGNNSLTAKGAFYVAG 139

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            + K+ SL  LN+    +   GA  +A  L +N ++  +++  N I   G   + K +K+
Sbjct: 140 YIKKIKSLLWLNIYMNDIGDEGAEKLADALKENRSITTLDMGGNNIHAVGVGAVAKVLKD 199

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD 180
            + +  + +S N  G +G + + +++K  G    L L    G C    Q      E  +D
Sbjct: 200 NSVITTLELSYNPIGPDGAKALAEVIKFHGNVKTLKL----GWC----QIGAKGAEFIAD 251

Query: 181 AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI 240
           A   N+ +S  D   ++   ++      +S    N++         L  LDL  N     
Sbjct: 252 ALKYNTTISVLDL-RANGLRDEGALCLARSLKVVNEA---------LTSLDLGFNEIRDD 301

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           G   +A  L+S+   A+  L + +N L   G   LS A    +E ++KE
Sbjct: 302 GAFAIAQALKSNEDVAVTSLNIGSNFLTKFGQSALSDARDHVFEMTEKE 350



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 11/152 (7%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAI---PL 58
           +A + KK  +L  +E+  N I + G T+L+ A  EN  +R+++LN N   Y GA+    L
Sbjct: 24  IAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSIRNIHLNGN---YGGALGVNAL 80

Query: 59  GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT---TLEDVNLTCNEISVQGGLDLV 115
            +AL    S+  L+L    +   G  S+   LT +    TL D+    N ++ +G   + 
Sbjct: 81  AKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHKGKLTLLDIG--NNSLTAKGAFYVA 138

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
             +K    L  +N+  N  G+EG E++   +K
Sbjct: 139 GYIKKIKSLLWLNIYMNDIGDEGAEKLADALK 170



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 57/106 (53%)

Query: 37  NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
           N  +  L LN   +  +GA  + + L K  SL +L L + +++ +G +S+A  L +N ++
Sbjct: 3   NSTIEKLQLNSADLGDEGAKAIAEMLKKNSSLRVLELNNNMIEYSGFTSLAGALLENNSI 62

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
            +++L  N     G   L KA++    ++++++  N  G+EG+  +
Sbjct: 63  RNIHLNGNYGGALGVNALAKALEGNKSIRELHLHGNSIGDEGIRSL 108


>gi|343172597|gb|AEL99002.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 184/425 (43%), Gaps = 59/425 (13%)

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
           +L S  I+++        G   +A+ L  N  +E+V+ + N I+  G       +++   
Sbjct: 160 ELRSFRIVDMSGRNFGDDGLIFLAESLAYNKAVEEVDFSANGITAAGLKAFDGILQSNFF 219

Query: 124 LKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
           LK +N+S N  G+EG + + E L+ + G+     L+ +     DE     +E        
Sbjct: 220 LKTLNLSGNPIGDEGAKCLCEILVSNTGLQK---LQLNSTGLGDEGAKAIAELLRK---- 272

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARL-----VELDLSDNAF 237
             NSNL+  + N+                NT + S  +  +GA L       L L+ N  
Sbjct: 273 --NSNLTAIELNN----------------NTIDYSGFASISGALLENSTIRALHLNGNYG 314

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL---------------------- 275
           G +GV  LA  L  +   ++ EL L+ N +G  G + L                      
Sbjct: 315 GALGVAALAKGLEGNK--SVSELHLHGNAMGNEGVRSLMLGLSARKGRMTLLDISNNEIG 372

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           S+      E  KK  S L L V++   N + +EGA+ +A   K+ +++  +++  N I+ 
Sbjct: 373 SRGAFHIAEYVKKTKSLLWLNVYM---NDIGDEGAEKIADALKQNRSITTIDLGGNNIHA 429

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
            GIT +++  ++N  +  L +  N     GA  + + L    ++  L LG C +   GA 
Sbjct: 430 RGITCIAEILKDNNVITTLEIAYNPFGPDGAKAISEVLKFHGNVKTLKLGWCQIGRQGAE 489

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEME 454
            IA  +  NTT+  ++L  N +   G + L +++K   + L  +++  N+  + G   + 
Sbjct: 490 FIADMIKYNTTISTLDLRANGLMDDGAVCLAQSLKVVNEALTSVDLGFNEIRDTGAFAIA 549

Query: 455 KLMKS 459
           + +K+
Sbjct: 550 QALKA 554



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 170/417 (40%), Gaps = 37/417 (8%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K +E V+   NGI   G+ A     + N  L+ LNL+ N I  +GA  L + L     L 
Sbjct: 190 KAVEEVDFSANGITAAGLKAFDGILQSNFFLKTLNLSGNPIGDEGAKCLCEILVSNTGLQ 249

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L    L   GA +IA+ L  N+ L  + L  N I   G   +  A+   + ++ +++
Sbjct: 250 KLQLNSTGLGDEGAKAIAELLRKNSNLTAIELNNNTIDYSGFASISGALLENSTIRALHL 309

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           + N  G  GV  + K +                    E     SE     +A G+    S
Sbjct: 310 NGNYGGALGVAALAKGL--------------------EGNKSVSELHLHGNAMGNEGVRS 349

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGVEGLAD 247
                 +        + SN    +    H++  +K    L+ L++  N  G  G E +AD
Sbjct: 350 LMLGLSARKGRMTLLDISNNEIGSRGAFHIAEYVKKTKSLLWLNVYMNDIGDEGAEKIAD 409

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
            L+ +   ++  + L  N +   G   +++ L D    +  E             N    
Sbjct: 410 ALKQNR--SITTIDLGGNNIHARGITCIAEILKDNNVITTLE----------IAYNPFGP 457

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           +GAK ++ V K    ++ +++    I   G   ++D  + N  +  L+L  N +   GA+
Sbjct: 458 DGAKAISEVLKFHGNVKTLKLGWCQIGRQGAEFIADMIKYNTTISTLDLRANGLMDDGAV 517

Query: 368 PLGQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDN--TTLEDVNLTCNEISVQG 421
            L Q+L  +  +L  ++LG   ++  GA +IA+ L  N    L  +NL+ N I+  G
Sbjct: 518 CLAQSLKVVNEALTSVDLGFNEIRDTGAFAIAQALKANEDVALTSINLSSNFITKLG 574



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 47/282 (16%)

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
           QS+  LKT      L+LS N  G  G + L ++L S+    L++L+LN+ GLG  G K +
Sbjct: 215 QSNFFLKT------LNLSGNPIGDEGAKCLCEILVSNT--GLQKLQLNSTGLGDEGAKAI 266

Query: 276 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
           ++ L       +K  +  A+++     N ++  G   ++    +  T+  + +  N    
Sbjct: 267 AELL-------RKNSNLTAIEL---NNNTIDYSGFASISGALLENSTIRALHLNGNYGGA 316

Query: 336 VGITALSDAFEENKNLRHLNLN-----------------------------DNTITYKGA 366
           +G+ AL+   E NK++  L+L+                             +N I  +GA
Sbjct: 317 LGVAALAKGLEGNKSVSELHLHGNAMGNEGVRSLMLGLSARKGRMTLLDISNNEIGSRGA 376

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + + + K  SL  LN+    +   GA  IA  L  N ++  ++L  N I  +G   + 
Sbjct: 377 FHIAEYVKKTKSLLWLNVYMNDIGDEGAEKIADALKQNRSITTIDLGGNNIHARGITCIA 436

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
           + +K+   +  + ++ N FG +G + + +++K  G    L L
Sbjct: 437 EILKDNNVITTLEIAYNPFGPDGAKAISEVLKFHGNVKTLKL 478



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 5/149 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + +K   L  +E+  N I + G  ++S A  EN  +R L+LN N     G   L + 
Sbjct: 266 IAELLRKNSNLTAIELNNNTIDYSGFASISGALLENSTIRALHLNGNYGGALGVAALAKG 325

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLT---DNTTLEDVNLTCNEISVQGGLDLVKAM 118
           L    S++ L+L    + + G  S+   L+      TL D+  + NEI  +G   + + +
Sbjct: 326 LEGNKSVSELHLHGNAMGNEGVRSLMLGLSARKGRMTLLDI--SNNEIGSRGAFHIAEYV 383

Query: 119 KNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           K    L  +NV  N  G+EG E++   +K
Sbjct: 384 KKTKSLLWLNVYMNDIGDEGAEKIADALK 412



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ +++  +++  N I+  GIT +++  ++N  +  L +  N     GA  + + 
Sbjct: 407 IADALKQNRSITTIDLGGNNIHARGITCIAEILKDNNVITTLEIAYNPFGPDGAKAISEV 466

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L LG C +   GA  IA  +  NTT+  ++L  N +   G + L +++K  
Sbjct: 467 LKFHGNVKTLKLGWCQIGRQGAEFIADMIKYNTTISTLDLRANGLMDDGAVCLAQSLKVV 526

Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKS 148
            + L  +++  N+  + G   + + +K+
Sbjct: 527 NEALTSVDLGFNEIRDTGAFAIAQALKA 554


>gi|255075797|ref|XP_002501573.1| predicted protein [Micromonas sp. RCC299]
 gi|226516837|gb|ACO62831.1| predicted protein [Micromonas sp. RCC299]
          Length = 627

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 45/263 (17%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCC-------------------FALEELKLNNNG 266
           RL +LDL+ N  GP G   +A++                         +ALEEL L +NG
Sbjct: 293 RLKKLDLTHNVIGPRGAAAVAEIFLGQALRGEGDGNHTAHRRHSHQRGYALEELNLRHNG 352

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           +G +G   ++ A+ +      K   PL     ++G++   + G  +L     +   L  +
Sbjct: 353 IGDSGANSIANAITEAARLRAKTSGPL-----MSGQSSFVSPG--LLDDARYEPHCLRAL 405

Query: 327 EMPQNGIYHVGITALS----------------DAFEENKNLRHLNLNDNTITYKGAIPLG 370
            +  NGI  VG  +LS                DA ++   +R L+L  N+I   GA  L 
Sbjct: 406 RLGFNGISAVGAQSLSEALNAAVRAARLSLGDDAAKDAPCVRELDLACNSIGPDGAKALA 465

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
           +AL  L  L   +LG+  +   G   +AK L +NTTL  + ++ N ++ +G   + ++M 
Sbjct: 466 KALDGLEEL---DLGNNGIGDGGIKWLAKALKENTTLRKLIVSGNNVTAEGTFWVAESMS 522

Query: 431 NKTKLKQINVSENQFGEEGVEEM 453
               L+ +++  N+ G+ G +++
Sbjct: 523 TNQDLRHLDLGSNEIGDAGAKDI 545



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 153/359 (42%), Gaps = 58/359 (16%)

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK--TKLKQINVSENQFGEEGVEEMEKLMK 147
           L     LE+++L  N I   G   L  A+      +LK+++++ N  G  G   + ++  
Sbjct: 258 LASGCALEELDLAGNHIGSDGACSLAGALVEVGCPRLKKLDLTHNVIGPRGAAAVAEIF- 316

Query: 148 SFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNAS----NQS 203
              +  AL                          EGD ++ +H   +H    +    N  
Sbjct: 317 ---LGQAL------------------------RGEGDGNHTAHRRHSHQRGYALEELNLR 349

Query: 204 HNNSNQSHNTS------NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
           HN    S   S        + +  KT   L+      ++F   G+  L D      C  L
Sbjct: 350 HNGIGDSGANSIANAITEAARLRAKTSGPLMS---GQSSFVSPGL--LDDARYEPHC--L 402

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSK-------KEGSPLALKVFIAGRNRLENEGA 310
             L+L  NG+   G + LS+AL+    +++        + +P   ++ +A  N +  +GA
Sbjct: 403 RALRLGFNGISAVGAQSLSEALNAAVRAARLSLGDDAAKDAPCVRELDLAC-NSIGPDGA 461

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           K LA   K L  LE +++  NGI   GI  L+ A +EN  LR L ++ N +T +G   + 
Sbjct: 462 KALA---KALDGLEELDLGNNGIGDGGIKWLAKALKENTTLRKLIVSGNNVTAEGTFWVA 518

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
           +++S    L  L+LG   +  AGA  IA+ L DNT L  + L  N I  +G L+L  A+
Sbjct: 519 ESMSTNQDLRHLDLGSNEIGDAGAKDIAEDLRDNTGLHSLILRRNGIGDEGALELCSAL 577



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 63/115 (54%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
           A+ K L  LE +++  NGI   GI  L+ A +EN  LR L ++ N +T +G   + +++S
Sbjct: 463 ALAKALDGLEELDLGNNGIGDGGIKWLAKALKENTTLRKLIVSGNNVTAEGTFWVAESMS 522

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
               L  L+LG   +  AGA  IA+ L DNT L  + L  N I  +G L+L  A+
Sbjct: 523 TNQDLRHLDLGSNEIGDAGAKDIAEDLRDNTGLHSLILRRNGIGDEGALELCSAL 577



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 19/147 (12%)

Query: 12  LEHVEMPQNGIYHVGITALS----------------DAFEENKKLRHLNLNDNTITYKGA 55
           L  + +  NGI  VG  +LS                DA ++   +R L+L  N+I   GA
Sbjct: 402 LRALRLGFNGISAVGAQSLSEALNAAVRAARLSLGDDAAKDAPCVRELDLACNSIGPDGA 461

Query: 56  IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
             L +AL  L  L   +LG+  +   G   +AK L +NTTL  + ++ N ++ +G   + 
Sbjct: 462 KALAKALDGLEEL---DLGNNGIGDGGIKWLAKALKENTTLRKLIVSGNNVTAEGTFWVA 518

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEM 142
           ++M     L+ +++  N+ G+ G +++
Sbjct: 519 ESMSTNQDLRHLDLGSNEIGDAGAKDI 545


>gi|320165994|gb|EFW42893.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 434

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK    L +LDLS+N  G +G + +A+ L+S+    L  L L  N  G  G + +++AL 
Sbjct: 45  LKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKT--LTSLSLGKNQTGDAGAQAIAEALK 102

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                +K   S           N++ ++ AK  A   K  KTL R+++ Q  I   G  A
Sbjct: 103 VNTTLTKLNLS----------WNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARA 152

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           +++A + NK +  L L+ N I   GA  + +AL    +L  L+L    +  AGA +I + 
Sbjct: 153 IAEALKVNKTVTELALDGNQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQAITEA 212

Query: 401 LTDNTTLEDVNLTCNEI 417
           +   TTL  ++L+ N I
Sbjct: 213 IKVGTTLTTLDLSNNCI 229



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N GA+ +A   K  KTL  + + +N     G  A+++A + N  L  LNL+ N + 
Sbjct: 59  NQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTKLNLSWNQVG 118

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
              A    +AL    +L  L L    +  AGA +IA+ L  N T+ ++ L  N+I   G 
Sbjct: 119 DDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDGNQIGDVGA 178

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A+K    L  +++S NQ G+ G + + + +K
Sbjct: 179 QAIAEALKTNKTLTALDLSLNQIGDAGAQAITEAIK 214



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 10/187 (5%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L +L L+ N +G  G + +++AL      S K  + L+L     G+N+  + GA+ +A  
Sbjct: 51  LTQLDLSENQIGNVGAQAIAEALK-----SNKTLTSLSL-----GKNQTGDAGAQAIAEA 100

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            K   TL ++ +  N +      A ++A + NK L  L L+   I   GA  + +AL   
Sbjct: 101 LKVNTTLTKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVN 160

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            ++  L L    +   GA +IA+ L  N TL  ++L+ N+I   G   + +A+K  T L 
Sbjct: 161 KTVTELALDGNQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLT 220

Query: 437 QINVSEN 443
            +++S N
Sbjct: 221 TLDLSNN 227



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + + +N     G  A+++A + N  L  LNL+ N +    A    +A
Sbjct: 69  IAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTKLNLSWNQVGDDAAKAFAEA 128

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    +  AGA +IA+ L  N T+ ++ L  N+I   G   + +A+K  
Sbjct: 129 LKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDGNQIGDVGAQAIAEALKTN 188

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L  +++S NQ G+ G + + + +K
Sbjct: 189 KTLTALDLSLNQIGDAGAQAITEAIK 214



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 57/111 (51%)

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
           N  L  L+L++N I   GA  + +AL    +L  L+LG      AGA +IA+ L  NTTL
Sbjct: 48  NTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTL 107

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             +NL+ N++         +A+K    L ++ + + Q G+ G   + + +K
Sbjct: 108 TKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALK 158



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 57/111 (51%)

Query: 37  NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
           N  L  L+L++N I   GA  + +AL    +L  L+LG      AGA +IA+ L  NTTL
Sbjct: 48  NTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTL 107

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
             +NL+ N++         +A+K    L ++ + + Q G+ G   + + +K
Sbjct: 108 TKLNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALK 158



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 69/138 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++ +N I +VG  A+++A + NK L  L+L  N     GA  + +AL    +L  
Sbjct: 50  TLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSLGKNQTGDAGAQAIAEALKVNTTLTK 109

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL    +    A + A+ L  N TL  + L   +I   G   + +A+K    + ++ + 
Sbjct: 110 LNLSWNQVGDDAAKAFAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALD 169

Query: 131 ENQFGEEGVEEMEKLMKS 148
            NQ G+ G + + + +K+
Sbjct: 170 GNQIGDVGAQAIAEALKT 187



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A   K  KTL  +++ Q  I   G  A+++A + NK +  L L+ N I   GA  + +A
Sbjct: 125 FAEALKVNKTLTRLKLHQVQIGDAGARAIAEALKVNKTVTELALDGNQIGDVGAQAIAEA 184

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 106
           L    +L  L+L    +  AGA +I + +   TTL  ++L+ N I
Sbjct: 185 LKTNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLTTLDLSNNCI 229



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 61/245 (24%)

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           +K  T L Q+++SENQ G  G + + + +KS     +L L                    
Sbjct: 45  LKVNTTLTQLDLSENQIGNVGAQAIAEALKSNKTLTSLSL-------------------- 84

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNA 236
                                         NQ+ +   Q+   +LK    L +L+LS N 
Sbjct: 85  ----------------------------GKNQTGDAGAQAIAEALKVNTTLTKLNLSWNQ 116

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
            G    +  A+ L+ +    L  LKL+   +G  G + +++AL        K  + LAL 
Sbjct: 117 VGDDAAKAFAEALKVNKT--LTRLKLHQVQIGDAGARAIAEAL-----KVNKTVTELALD 169

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
                 N++ + GA+ +A   K  KTL  +++  N I   G  A+++A +    L  L+L
Sbjct: 170 -----GNQIGDVGAQAIAEALKTNKTLTALDLSLNQIGDAGAQAITEAIKVGTTLTTLDL 224

Query: 357 NDNTI 361
           ++N I
Sbjct: 225 SNNCI 229


>gi|320167612|gb|EFW44511.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 635

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 69/128 (53%)

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N I  VG  A+++A + N  +  LNL DN I   GA  + QAL    ++  LNL    + 
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            AGA +IA+ L  NTTL  + L  N+I   G   + +A+K   KL  + ++ENQ G+ G 
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGA 129

Query: 451 EEMEKLMK 458
           + + + +K
Sbjct: 130 QAIAEALK 137



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 69/128 (53%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I  VG  A+++A + N  +  LNL DN I   GA  + QAL    ++  LNL    + 
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            AGA +IA+ L  NTTL  + L  N+I   G   + +A+K   KL  + ++ENQ G+ G 
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGA 129

Query: 140 EEMEKLMK 147
           + + + +K
Sbjct: 130 QAIAEALK 137



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)

Query: 44  NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 103
           +L+ N I   GA  + +AL    ++  LNLGD  + +AGA +IA+ L  NTT+  +NL  
Sbjct: 6   SLDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQH 65

Query: 104 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            +IS  G   + +A+K  T L  + +  NQ G+ G + + + +K
Sbjct: 66  VQISDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALK 109



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%)

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
           +L+ N I   GA  + +AL    ++  LNLGD  + +AGA +IA+ L  NTT+  +NL  
Sbjct: 6   SLDFNQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQH 65

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +IS  G   + +A+K  T L  + +  NQ G+ G + + + +K
Sbjct: 66  VQISDAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALK 109



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 76/154 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GA+ +A   K   T+  + +  N I + G  A++ A + N  +  LNL    I+
Sbjct: 10  NQIGDVGAQAIAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQIS 69

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL    +L  L LG   +  AGA +IA+ L  N  L+ + L  N+I   G 
Sbjct: 70  DAGAQTIAEALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGA 129

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
             + +A+K   +L  + + EN   E  +  ++++
Sbjct: 130 QAIAEALKVNKRLILLILDENSISESAINALKQV 163



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 69/144 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  + +  N I + G  A++ A + N  +  LNL    I+  GA  + +A
Sbjct: 20  IAEALKVNTTVTTLNLGDNQIGNAGAQAIAQALKVNTTITGLNLQHVQISDAGAQTIAEA 79

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L LG   +  AGA +IA+ L  N  L+ + L  N+I   G   + +A+K  
Sbjct: 80  LKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQIGDAGAQAIAEALKVN 139

Query: 122 TKLKQINVSENQFGEEGVEEMEKL 145
            +L  + + EN   E  +  ++++
Sbjct: 140 KRLILLILDENSISESAINALKQV 163



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 24/149 (16%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    +  L+L DN  G  G + +A           + LK+N     ITG  L    +
Sbjct: 23  ALKVNTTVTTLNLGDNQIGNAGAQAIA-----------QALKVNTT---ITGLNLQHVQI 68

Query: 280 HDCYESSKKEGSPLALKVFIA------GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
            D    +  E    ALKV         GRN++ + GA+ +A   K  K L+ + + +N I
Sbjct: 69  SDAGAQTIAE----ALKVNTTLTTLGLGRNQIGDAGAQAIAEALKVNKKLDTLFLNENQI 124

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTIT 362
              G  A+++A + NK L  L L++N+I+
Sbjct: 125 GDAGAQAIAEALKVNKRLILLILDENSIS 153


>gi|348583944|ref|XP_003477732.1| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2-like [Cavia porcellus]
          Length = 1059

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 17/233 (7%)

Query: 228  VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG-CKLLSKALHDCYESS 286
            V L L  N+ G IGVE L       C    + L L +N +   G CKL+  ALH  Y   
Sbjct: 812  VALQLDHNSVGDIGVEQLL-----PCIGICKALYLRDNNISDRGICKLIEHALH--YGQL 864

Query: 287  KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            +K      L +F    N+L +  A  +A + +  +    + +  N I   G   L+    
Sbjct: 865  QK------LALF---NNKLTDGCAHAMAKLLECNQNFLALRLGNNHITAAGAQVLAQGLR 915

Query: 347  ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
             N +L+ L    NT+  +GA  L +AL    SL  L+L    + S GA ++A+ L  N  
Sbjct: 916  RNASLQFLGFWGNTVGDEGAQALAEALGDHQSLKWLSLVGNSIGSMGAQALAQMLEKNVA 975

Query: 407  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            LE++ L  N +  +G   L + +K  + LK + +S N     GVE + + ++S
Sbjct: 976  LEELCLEENHLCDEGVCSLAEGLKRNSSLKVLKLSNNSVTSRGVEALLQALES 1028



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 62/129 (48%)

Query: 20   NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
            N I   G   L+     N  L+ L    NT+  +GA  L +AL    SL  L+L    + 
Sbjct: 900  NHITAAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAEALGDHQSLKWLSLVGNSIG 959

Query: 80   SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            S GA ++A+ L  N  LE++ L  N +  +G   L + +K  + LK + +S N     GV
Sbjct: 960  SMGAQALAQMLEKNVALEELCLEENHLCDEGVCSLAEGLKRNSSLKVLKLSNNSVTSRGV 1019

Query: 140  EEMEKLMKS 148
            E + + ++S
Sbjct: 1020 EALLQALES 1028



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A++   E N+    L L +N IT  GA  L Q L +  SL  L      +   GA ++A+
Sbjct: 881 AMAKLLECNQNFLALRLGNNHITAAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAE 940

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            L D+ +L+ ++L  N I   G   L + ++    L+++ + EN   +EGV
Sbjct: 941 ALGDHQSLKWLSLVGNSIGSMGAQALAQMLEKNVALEELCLEENHLCDEGV 991



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   GI  L +      +L+ L L +N +T   A  + + L    +   L LG+  + 
Sbjct: 844 NNISDRGICKLIEHALHYGQLQKLALFNNKLTDGCAHAMAKLLECNQNFLALRLGNNHIT 903

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           +AGA  +A+ L  N +L+ +    N +  +G   L +A+ +   LK +++  N  G  G 
Sbjct: 904 AAGAQVLAQGLRRNASLQFLGFWGNTVGDEGAQALAEALGDHQSLKWLSLVGNSIGSMGA 963

Query: 140 EEMEKLMKSFGMAAALVLED----DEGECSDEE 168
           + + ++++       L LE+    DEG CS  E
Sbjct: 964 QALAQMLEKNVALEELCLEENHLCDEGVCSLAE 996


>gi|432119361|gb|ELK38439.1| Protein NLRC5 [Myotis davidii]
          Length = 1522

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 46/268 (17%)

Query: 220  SLKTGARLVELDLS----DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
            +LK  + L  LDLS    D++   +  +GL+ + R      L+ L L+ + +G  GC  L
Sbjct: 1225 ALKGRSWLRRLDLSHFPLDDSTLAVLAQGLSHMTR------LQSLCLSGDDIGDVGCSCL 1278

Query: 276  SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
            +KAL           +  +L+      N++ + GA+ LAAV   L  L RV++  NGI  
Sbjct: 1279 AKALE----------AATSLEELGLSHNQIGDAGAQHLAAVLPGLPELRRVDLSANGICP 1328

Query: 336  VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL------------------- 376
             G   L ++    K+L  L L+ N I   G + L ++L+                     
Sbjct: 1329 AGGVRLVESLALCKHLEELILSANGICPAGGVRLVESLALCKHLEELMLGCNALGDPTAL 1388

Query: 377  -------PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
                   P L +L+L    L   GA S+ + L     LE+++L   EI  Q    L  + 
Sbjct: 1389 ELARALPPHLRVLHLRSSRLGPEGALSLGRALDGCPHLEEISLVSCEIDDQAAKLLAASF 1448

Query: 430  KNKTKLKQINVSENQFGEEGVEEMEKLM 457
                 L++I +S N  G+E   E+ +++
Sbjct: 1449 MLCPALEEILLSWNLLGDEAAAELAQVL 1476



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 11/215 (5%)

Query: 244  GLADLLRS-SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 302
            GLA L    S C  LEEL L+NN LG     +L+ AL       +     L L  F    
Sbjct: 1190 GLAPLASGLSRCRHLEELDLSNNQLGEEASTVLAGAL-----KGRSWLRRLDLSHF---- 1240

Query: 303  NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
              L++    +LA     +  L+ + +  + I  VG + L+ A E   +L  L L+ N I 
Sbjct: 1241 -PLDDSTLAVLAQGLSHMTRLQSLCLSGDDIGDVGCSCLAKALEAATSLEELGLSHNQIG 1299

Query: 363  YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
              GA  L   L  LP L  ++L    +  AG   + + L     LE++ L+ N I   GG
Sbjct: 1300 DAGAQHLAAVLPGLPELRRVDLSANGICPAGGVRLVESLALCKHLEELILSANGICPAGG 1359

Query: 423  LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            + LV+++     L+++ +  N  G+    E+ + +
Sbjct: 1360 VRLVESLALCKHLEELMLGCNALGDPTALELARAL 1394



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 91/419 (21%), Positives = 163/419 (38%), Gaps = 69/419 (16%)

Query: 40   LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
            LR L+L+  T+ +     L  +L  L  L    L    + S G + +A  L+    LE++
Sbjct: 1148 LRQLSLSQVTLCHASCQLLQSSLLPLSELKTFRLASSCVSSGGLAPLASGLSRCRHLEEL 1207

Query: 100  NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE- 158
            +L+ N++  +    L  A+K ++ L+++++S     +  +  + + +       +L L  
Sbjct: 1208 DLSNNQLGEEASTVLAGALKGRSWLRRLDLSHFPLDDSTLAVLAQGLSHMTRLQSLCLSG 1267

Query: 159  DDEGECSDEEQDEESEEENDSDAEGDNSNLSHN---DSNHSHNASNQSHNNSNQSHNTSN 215
            DD G+       +  E     +  G    LSHN   D+   H A+               
Sbjct: 1268 DDIGDVGCSCLAKALEAATSLEELG----LSHNQIGDAGAQHLAA--------------- 1308

Query: 216  QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
                 L     L  +DLS N   P G   L + L  + C  LEEL L+ NG+   G   L
Sbjct: 1309 ----VLPGLPELRRVDLSANGICPAGGVRLVESL--ALCKHLEELILSANGICPAGGVRL 1362

Query: 276  SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYH 335
             ++L  C            L+  + G N L +                            
Sbjct: 1363 VESLALCKH----------LEELMLGCNALGDP--------------------------- 1385

Query: 336  VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
               TAL  A     +LR L+L  + +  +GA+ LG+AL   P L  ++L  C +    A 
Sbjct: 1386 ---TALELARALPPHLRVLHLRSSRLGPEGALSLGRALDGCPHLEEISLVSCEIDDQAAK 1442

Query: 396  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
             +A        LE++ L+ N +  +   +L + +    +LK +++  N    +  + ++
Sbjct: 1443 LLAASFMLCPALEEILLSWNLLGDEAAAELAQVLPRMQRLKSVDLWNNHVPPDAAQRLQ 1501



 Score = 48.9 bits (115), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 62/131 (47%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA+   + + LE +++  N +     T L+ A +    LR L+L+   +       L Q 
Sbjct: 1194 LASGLSRCRHLEELDLSNNQLGEEASTVLAGALKGRSWLRRLDLSHFPLDDSTLAVLAQG 1253

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            LS +  L  L L    +   G S +AK L   T+LE++ L+ N+I   G   L   +   
Sbjct: 1254 LSHMTRLQSLCLSGDDIGDVGCSCLAKALEAATSLEELGLSHNQIGDAGAQHLAAVLPGL 1313

Query: 122  TKLKQINVSEN 132
             +L+++++S N
Sbjct: 1314 PELRRVDLSAN 1324



 Score = 47.8 bits (112), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 67/146 (45%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +LA     +  L+ + +  + I  VG + L+ A E    L  L L+ N I   GA  L  
Sbjct: 1249 VLAQGLSHMTRLQSLCLSGDDIGDVGCSCLAKALEAATSLEELGLSHNQIGDAGAQHLAA 1308

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             L  LP L  ++L    +  AG   + + L     LE++ L+ N I   GG+ LV+++  
Sbjct: 1309 VLPGLPELRRVDLSANGICPAGGVRLVESLALCKHLEELILSANGICPAGGVRLVESLAL 1368

Query: 121  KTKLKQINVSENQFGEEGVEEMEKLM 146
               L+++ +  N  G+    E+ + +
Sbjct: 1369 CKHLEELMLGCNALGDPTALELARAL 1394



 Score = 46.6 bits (109), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 61/121 (50%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            G+  L+      + L  L+L++N +  + +  L  AL     L  L+L    L  +  + 
Sbjct: 1190 GLAPLASGLSRCRHLEELDLSNNQLGEEASTVLAGALKGRSWLRRLDLSHFPLDDSTLAV 1249

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            +A+ L+  T L+ + L+ ++I   G   L KA++  T L+++ +S NQ G+ G + +  +
Sbjct: 1250 LAQGLSHMTRLQSLCLSGDDIGDVGCSCLAKALEAATSLEELGLSHNQIGDAGAQHLAAV 1309

Query: 146  M 146
            +
Sbjct: 1310 L 1310



 Score = 42.0 bits (97), Expect = 0.76,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 54/116 (46%)

Query: 28   TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
            TAL  A      LR L+L  + +  +GA+ LG+AL   P L  ++L  C +    A  +A
Sbjct: 1386 TALELARALPPHLRVLHLRSSRLGPEGALSLGRALDGCPHLEEISLVSCEIDDQAAKLLA 1445

Query: 88   KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
                    LE++ L+ N +  +   +L + +    +LK +++  N    +  + ++
Sbjct: 1446 ASFMLCPALEEILLSWNLLGDEAAAELAQVLPRMQRLKSVDLWNNHVPPDAAQRLQ 1501



 Score = 39.3 bits (90), Expect = 4.0,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 58/132 (43%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +LA   K    L  +++    +    +  L+       +L+ L L+ + I   G   L +
Sbjct: 1221 VLAGALKGRSWLRRLDLSHFPLDDSTLAVLAQGLSHMTRLQSLCLSGDDIGDVGCSCLAK 1280

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            AL    SL  L L    +  AGA  +A  L     L  V+L+ N I   GG+ LV+++  
Sbjct: 1281 ALEAATSLEELGLSHNQIGDAGAQHLAAVLPGLPELRRVDLSANGICPAGGVRLVESLAL 1340

Query: 121  KTKLKQINVSEN 132
               L+++ +S N
Sbjct: 1341 CKHLEELILSAN 1352



 Score = 39.3 bits (90), Expect = 4.9,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 33/143 (23%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           LEE+ L+ N L   GC+L+++A               A ++ IAG+  L + G  +    
Sbjct: 870 LEEVDLSGNQLEDEGCRLVAEA---------------APQLHIAGKLDLSDNGLSVAGLP 914

Query: 317 FKKLKTLERVEMPQN------------GIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           +     L  V M QN            G+  + +  L +   + ++L  L+L+ N+I+ +
Sbjct: 915 W----VLRAVSMCQNLADLHISRFTDCGLSQMHVEPLCELLRKCEDLSQLDLSGNSISQE 970

Query: 365 GAIPLGQALSKLPSL--AILNLG 385
           GA+ L + L   P +  A +NLG
Sbjct: 971 GALCLVETLPSCPRIREAAVNLG 993



 Score = 38.5 bits (88), Expect = 7.8,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 27/154 (17%)

Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
           +EG PL  +V ++G N+LE+EG +++A    +L    ++++  NG+   G+  +  A   
Sbjct: 865 REG-PLLEEVDLSG-NQLEDEGCRLVAEAAPQLHIAGKLDLSDNGLSVAGLPWVLRAVSM 922

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
            +NL  L+++  T                         DC L       + + L     L
Sbjct: 923 CQNLADLHISRFT-------------------------DCGLSQMHVEPLCELLRKCEDL 957

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
             ++L+ N IS +G L LV+ + +  ++++  V+
Sbjct: 958 SQLDLSGNSISQEGALCLVETLPSCPRIREAAVN 991


>gi|156355238|ref|XP_001623578.1| predicted protein [Nematostella vectensis]
 gi|156210293|gb|EDO31478.1| predicted protein [Nematostella vectensis]
          Length = 410

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 33/231 (14%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   +V+L+LSDN  GP G   +A++LR +C +  + L           C++LS  
Sbjct: 52  IALVSNTSVVKLNLSDNWMGPEGASYVAEMLRENC-YITDLL-----------CEVLSDD 99

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           + +                     N+L + G++ +A V      + R+    NG      
Sbjct: 100 MSE---------------------NKLGDHGSESIADVLLHNPNIHRLTANGNGFDEKAA 138

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             L++A + N  L++L L+ N    K  + L  AL+   +++ LNL    L++ GA +IA
Sbjct: 139 KILAEAIKLNNRLKYLCLSHNKFGEKAGLELAPALAANETISELNLSWNHLRNRGACAIA 198

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             L +N TL+ +NL  N     G L + +A+K    L +++++ N+   EG
Sbjct: 199 LSLKENITLKILNLAWNGFGNDGALAMGEALKVNASLLELDLTNNRITAEG 249



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 143/344 (41%), Gaps = 59/344 (17%)

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           + AG   ++ Y   N    +V++  + +   G   +  A+ + T + ++N+S+N  G EG
Sbjct: 16  REAGVIPVS-YFLRNMLEAEVDIKHHGLGAMGSKAIAIALVSNTSVVKLNLSDNWMGPEG 74

Query: 139 VEEMEKLMKSFGMAAAL---VLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNH 195
              + ++++       L   VL DD  E  ++  D  SE   D         L HN + H
Sbjct: 75  ASYVAEMLRENCYITDLLCEVLSDDMSE--NKLGDHGSESIADV--------LLHNPNIH 124

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
              A     N +      +     ++K   RL  L LS N FG      LA  L ++   
Sbjct: 125 RLTA-----NGNGFDEKAAKILAEAIKLNNRLKYLCLSHNKFGEKAGLELAPALAAN--E 177

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            + EL L+                                       N L N GA  +A 
Sbjct: 178 TISELNLS--------------------------------------WNHLRNRGACAIAL 199

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
             K+  TL+ + +  NG  + G  A+ +A + N +L  L+L +N IT +GA+ LG+ L+ 
Sbjct: 200 SLKENITLKILNLAWNGFGNDGALAMGEALKVNASLLELDLTNNRITAEGAVLLGKGLTI 259

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
             +L +L +G   ++SAGA +I   + +N     V +  ++I+V
Sbjct: 260 NTTLQVLKIGKNPMQSAGAYAILNAMKNNPESALVEVELSDITV 303



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 63/119 (52%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           NG        L++A + N +L++L L+ N    K  + L  AL+   +++ LNL    L+
Sbjct: 131 NGFDEKAAKILAEAIKLNNRLKYLCLSHNKFGEKAGLELAPALAANETISELNLSWNHLR 190

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           + GA +IA  L +N TL+ +NL  N     G L + +A+K    L +++++ N+   EG
Sbjct: 191 NRGACAIALSLKENITLKILNLAWNGFGNDGALAMGEALKVNASLLELDLTNNRITAEG 249



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA      +T+  + +  N + + G  A++ + +EN  L+ LNL  N     GA+ +G+A
Sbjct: 169 LAPALAANETISELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFGNDGALAMGEA 228

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    SL  L+L +  + + GA  + K LT NTTL+ + +  N +   G   ++ AMKN
Sbjct: 229 LKVNASLLELDLTNNRITAEGAVLLGKGLTINTTLQVLKIGKNPMQSAGAYAILNAMKN 287



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 60/107 (56%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+  TL+ + +  NG  + G  A+ +A + N  L  L+L +N IT +GA+ LG+ 
Sbjct: 197 IALSLKENITLKILNLAWNGFGNDGALAMGEALKVNASLLELDLTNNRITAEGAVLLGKG 256

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 108
           L+   +L +L +G   ++SAGA +I   + +N     V +  ++I+V
Sbjct: 257 LTINTTLQVLKIGKNPMQSAGAYAILNAMKNNPESALVEVELSDITV 303



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 60/118 (50%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L+ A   N+ +  LNL+ N +  +GA  +  +L +  +L ILNL      + GA ++ + 
Sbjct: 169 LAPALAANETISELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFGNDGALAMGEA 228

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           L  N +L +++LT N I+ +G + L K +   T L+ + + +N     G   +   MK
Sbjct: 229 LKVNASLLELDLTNNRITAEGAVLLGKGLTINTTLQVLKIGKNPMQSAGAYAILNAMK 286



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 58/132 (43%)

Query: 16  EMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 75
           +M +N +   G  +++D    N  +  L  N N    K A  L +A+     L  L L  
Sbjct: 99  DMSENKLGDHGSESIADVLLHNPNIHRLTANGNGFDEKAAKILAEAIKLNNRLKYLCLSH 158

Query: 76  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
                     +A  L  N T+ ++NL+ N +  +G   +  ++K    LK +N++ N FG
Sbjct: 159 NKFGEKAGLELAPALAANETISELNLSWNHLRNRGACAIALSLKENITLKILNLAWNGFG 218

Query: 136 EEGVEEMEKLMK 147
            +G   M + +K
Sbjct: 219 NDGALAMGEALK 230


>gi|156353043|ref|XP_001622887.1| predicted protein [Nematostella vectensis]
 gi|156209518|gb|EDO30787.1| predicted protein [Nematostella vectensis]
          Length = 408

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 170/388 (43%), Gaps = 38/388 (9%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           L  +GA  IA  L  NTT+  +++  + I   G   + K ++N T+L   N+S N  G +
Sbjct: 29  LGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVIQNVTRL---NLSSNPVGYD 85

Query: 138 GVEEMEKLM-KSFGMAAALVLEDDEGECSDEEQ-----------DEESEEENDSDAEGDN 185
           GV+ + +L+ KS      L L+    +    ++           +E S   ND + EG  
Sbjct: 86  GVKAIARLLVKSCSRLKFLFLDHCNIDVFGAKELAIALSRNSCLEELSVACNDINDEGMC 145

Query: 186 SNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLV--ELDLSDNAFG-PIGV 242
           +      SN +      S+NN  Q+      S        R +  E D   N F  P   
Sbjct: 146 ALAESVASNETLQVLYISYNNVGQNGKKVIISACETSKSVRHLYHENDSILNTFTKP--- 202

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 302
                   S C   L  L      LGI    + S+A     E  ++  +  +L  F+ G 
Sbjct: 203 -------HSVC---LVTLNKTVRTLGIRSHNMTSEASRAIGEMLRRNTTVTSL--FLLG- 249

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
            RL + GA+ +A    + KT+  + + ++ I   GI A+++  +   N+  LNL+ N + 
Sbjct: 250 GRLGDSGARGIAIGLAQNKTIADLSLVRSSIGTAGIKAITNVIQ---NVTRLNLSSNPVG 306

Query: 363 YKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
           Y G   + + L K    L  L L  C +   GA  +A  L+ ++ LE++++ CN+I+ +G
Sbjct: 307 YDGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSRDSCLEELSVACNDINDEG 366

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEG 449
              L +++ +   L+ + +S N  G+ G
Sbjct: 367 MCALAESVASNETLQVLYISYNNVGQNG 394



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 5/154 (3%)

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           +F+ G  RL + GA+ +A    +  T+ ++ +  + I   GI A++   +   N+  LNL
Sbjct: 22  LFLLG-GRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVIQ---NVTRLNL 77

Query: 357 NDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           + N + Y G   + + L K  S L  L L  C +   GA  +A  L+ N+ LE++++ CN
Sbjct: 78  SSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDVFGAKELAIALSRNSCLEELSVACN 137

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +I+ +G   L +++ +   L+ + +S N  G+ G
Sbjct: 138 DINDEGMCALAESVASNETLQVLYISYNNVGQNG 171



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 78/391 (19%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LA 69
           T+  + +  + I   GI A++   +    +  LNL+ N + Y G   + + L K  S L 
Sbjct: 46  TIAQLSIAHSSIGTAGIKAITKVIQN---VTRLNLSSNPVGYDGVKAIARLLVKSCSRLK 102

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L  C +   GA  +A  L+ N+ LE++++ CN+I+ +G   L +++ +   L+ + +
Sbjct: 103 FLFLDHCNIDVFGAKELAIALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYI 162

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
           S N  G+ G    +K++ S               C   +       ENDS        L+
Sbjct: 163 SYNNVGQNG----KKVIIS--------------ACETSKSVRHLYHENDSI-------LN 197

Query: 190 HNDSNHS----------HNASNQSHNNSNQS---------HNTSNQSHMSL-----KTGA 225
                HS               +SHN ++++          NT+  S   L      +GA
Sbjct: 198 TFTKPHSVCLVTLNKTVRTLGIRSHNMTSEASRAIGEMLRRNTTVTSLFLLGGRLGDSGA 257

Query: 226 RLVELDLSDN-----------AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
           R + + L+ N           + G  G++ + +++++     +  L L++N +G  G K 
Sbjct: 258 RGIAIGLAQNKTIADLSLVRSSIGTAGIKAITNVIQN-----VTRLNLSSNPVGYDGVKA 312

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           +++ L           S   LK        ++  GAK LA    +   LE + +  N I 
Sbjct: 313 IARLLVK---------SCCRLKFLFLDHCNIDVFGAKELAIALSRDSCLEELSVACNDIN 363

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKG 365
             G+ AL+++   N+ L+ L ++ N +   G
Sbjct: 364 DEGMCALAESVASNETLQVLYISYNNVGQNG 394



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 47/262 (17%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL--HDCYE 284
           +  L+LS N  G  GV+ +A LL  SC   L+ L L++  + + G K L+ AL  + C E
Sbjct: 72  VTRLNLSSNPVGYDGVKAIARLLVKSCS-RLKFLFLDHCNIDVFGAKELAIALSRNSCLE 130

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
                             N + +EG   LA      +TL+ + +  N +   G   +  A
Sbjct: 131 E------------LSVACNDINDEGMCALAESVASNETLQVLYISYNNVGQNGKKVIISA 178

Query: 345 FEENKNLRH-----------------------------LNLNDNTITYKGAIPLGQALSK 375
            E +K++RH                             L +  + +T + +  +G+ L +
Sbjct: 179 CETSKSVRHLYHENDSILNTFTKPHSVCLVTLNKTVRTLGIRSHNMTSEASRAIGEMLRR 238

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             ++  L L    L  +GA  IA  L  N T+ D++L  + I   G   +   ++N T+L
Sbjct: 239 NTTVTSLFLLGGRLGDSGARGIAIGLAQNKTIADLSLVRSSIGTAGIKAITNVIQNVTRL 298

Query: 436 KQINVSENQFGEEGVEEMEKLM 457
              N+S N  G +GV+ + +L+
Sbjct: 299 ---NLSSNPVGYDGVKAIARLL 317



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 4/130 (3%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK-LPSL 68
           KT+  + + ++ I   GI A+++  +    +  LNL+ N + Y G   + + L K    L
Sbjct: 268 KTIADLSLVRSSIGTAGIKAITNVIQN---VTRLNLSSNPVGYDGVKAIARLLVKSCCRL 324

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             L L  C +   GA  +A  L+ ++ LE++++ CN+I+ +G   L +++ +   L+ + 
Sbjct: 325 KFLFLDHCNIDVFGAKELAIALSRDSCLEELSVACNDINDEGMCALAESVASNETLQVLY 384

Query: 129 VSENQFGEEG 138
           +S N  G+ G
Sbjct: 385 ISYNNVGQNG 394


>gi|407410494|gb|EKF32905.1| hypothetical protein MOQ_003233, partial [Trypanosoma cruzi
           marinkellei]
          Length = 774

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 9/214 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LD+S N  G  G++ LA +L ++C   +  L L  N +G  G  +L +A+    E  + +
Sbjct: 321 LDISVNNLGYAGIKALAPVLETTC---ITHLSLQRNSMGDNGGMVLFQAIAGAIEDGEDK 377

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
              L L+V     N L  + AK +  V      L+ + +  N  +      + +   ENK
Sbjct: 378 LEYLNLEV-----NELGEKTAKAMQRVLSSSTALKTLRLSYNS-FGAASKYIMEGLAENK 431

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            LR L L+   I       +G AL+   +L  L+L +  LK AG+  IA+ +  N  L  
Sbjct: 432 YLRSLFLSFCEIREADGAAIGAALTANSTLQHLDLSNNKLKDAGSQFIAEAMKTNEGLIS 491

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           +NL+CN+I   GG  +   + +   L+++N+  N
Sbjct: 492 LNLSCNKIGDGGGKAIALFLTSNRTLRELNLRRN 525



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 53/219 (24%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL------ 356
           NRL +EGA  +A + K  +T+  V +  N I H+G  AL+ A  EN  +  L+L      
Sbjct: 208 NRLRDEGACSIAKLIKINRTIVHVGLRSNDIGHIGGVALARALLENNTVVSLDLGAHSGI 267

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNL------------------GDCLLK-------- 390
           N N I  +GA  +G  L     L+ LNL                  G+C +K        
Sbjct: 268 NGNHIATEGAEAIGIMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNCSVKHLDISVNN 327

Query: 391 --SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-----NKTKLKQINVSEN 443
              AG  ++A  L + T +  ++L  N +   GG+ L +A+       + KL+ +N+  N
Sbjct: 328 LGYAGIKALAPVL-ETTCITHLSLQRNSMGDNGGMVLFQAIAGAIEDGEDKLEYLNLEVN 386

Query: 444 QFGEEGVEEMEKLMK-------------SFGMAAALVLE 469
           + GE+  + M++++              SFG A+  ++E
Sbjct: 387 ELGEKTAKAMQRVLSSSTALKTLRLSYNSFGAASKYIME 425



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 158/401 (39%), Gaps = 92/401 (22%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNL------NDNTITYKGA 55
           +A + K  +T+ HV +  N I H+G  AL+ A  EN  +  L+L      N N I  +GA
Sbjct: 218 IAKLIKINRTIVHVGLRSNDIGHIGGVALARALLENNTVVSLDLGAHSGINGNHIATEGA 277

Query: 56  IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
             +G  L     L+ LNL    L  +G S I   L  N +++ ++++ N +   G   L 
Sbjct: 278 EAIGIMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNCSVKHLDISVNNLGYAGIKALA 337

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM----AAALVLEDDEGECSDEEQDE 171
             ++  T +  +++  N  G+ G           GM    A A  +ED  GE   E  + 
Sbjct: 338 PVLET-TCITHLSLQRNSMGDNG-----------GMVLFQAIAGAIED--GEDKLEYLNL 383

Query: 172 ESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELD 231
           E  E  +  A+     LS                           S  +LKT      L 
Sbjct: 384 EVNELGEKTAKAMQRVLS---------------------------SSTALKT------LR 410

Query: 232 LSDNAFGPIG---VEGLAD--LLRS---SCC-----------------FALEELKLNNNG 266
           LS N+FG      +EGLA+   LRS   S C                   L+ L L+NN 
Sbjct: 411 LSYNSFGAASKYIMEGLAENKYLRSLFLSFCEIREADGAAIGAALTANSTLQHLDLSNNK 470

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           L   G + +++A+       K     ++L +     N++ + G K +A      +TL  +
Sbjct: 471 LKDAGSQFIAEAM-------KTNEGLISLNLSC---NKIGDGGGKAIALFLTSNRTLREL 520

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
            + +N + +V    L D    N  L  +N+  N   YK  I
Sbjct: 521 NLRRNCMSNVTGELLDDQLRVNMTLEKMNVGFNDFRYKSLI 561



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 16/234 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDLS N     G   +A L++ +       + L +N +G  G   L++AL    E++   
Sbjct: 203 LDLSGNRLRDEGACSIAKLIKINRTIV--HVGLRSNDIGHIGGVALARAL---LENNTVV 257

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
              L     I G N +  EGA+ +  + +  K L  + +  NG+   G++ +    + N 
Sbjct: 258 SLDLGAHSGING-NHIATEGAEAIGIMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNC 316

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLP----SLAILNLGD---CLLKSAGASSIAKYLT 402
           +++HL+++ N + Y G   L   L        SL   ++GD    +L  A A +I     
Sbjct: 317 SVKHLDISVNNLGYAGIKALAPVLETTCITHLSLQRNSMGDNGGMVLFQAIAGAIE---D 373

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
               LE +NL  NE+  +    + + + + T LK + +S N FG      ME L
Sbjct: 374 GEDKLEYLNLEVNELGEKTAKAMQRVLSSSTALKTLRLSYNSFGAASKYIMEGL 427


>gi|443693081|gb|ELT94524.1| hypothetical protein CAPTEDRAFT_177270 [Capitella teleta]
          Length = 490

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 89/185 (48%)

Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           L      DC   +K   +   LKVF   R+++++E  ++L +      +L  +++  N I
Sbjct: 259 LFQFTARDCLYLAKCVAACKTLKVFRLHRSKVDDEKVRVLISYLLDHPSLVHLDLSHNLI 318

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G  A+        +L  LN+ DNTI   GA  +  AL K  +L  LN+    L   G
Sbjct: 319 SDRGARAIGKFINNRSHLTKLNICDNTIRAVGAQAIAHALIKNNTLTDLNMRLNRLGDDG 378

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             +I   L  NTTL  +NL  N++       L +A+   + L++I++S N  G +G +++
Sbjct: 379 GQAICSALLRNTTLTSINLGSNDLREPTATILSQALVQNSTLRKIDLSCNPLGSDGGKQL 438

Query: 454 EKLMK 458
           ++ M+
Sbjct: 439 QEGME 443



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 66/135 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA      KTL+   + ++ +    +  L     ++  L HL+L+ N I+ +GA  +G+ 
Sbjct: 270 LAKCVAACKTLKVFRLHRSKVDDEKVRVLISYLLDHPSLVHLDLSHNLISDRGARAIGKF 329

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           ++    L  LN+ D  +++ GA +IA  L  N TL D+N+  N +   GG  +  A+   
Sbjct: 330 INNRSHLTKLNICDNTIRAVGAQAIAHALIKNNTLTDLNMRLNRLGDDGGQAICSALLRN 389

Query: 122 TKLKQINVSENQFGE 136
           T L  IN+  N   E
Sbjct: 390 TTLTSINLGSNDLRE 404



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 71/146 (48%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + + GA+ +         L ++ +  N I  VG  A++ A  +N  L  LN+  N + 
Sbjct: 316 NLISDRGARAIGKFINNRSHLTKLNICDNTIRAVGAQAIAHALIKNNTLTDLNMRLNRLG 375

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   +  AL +  +L  +NLG   L+   A+ +++ L  N+TL  ++L+CN +   GG
Sbjct: 376 DDGGQAICSALLRNTTLTSINLGSNDLREPTATILSQALVQNSTLRKIDLSCNPLGSDGG 435

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEE 448
             L + M+    +  +++   + G+E
Sbjct: 436 KQLQEGMEENEIITHMDLRLTECGQE 461



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 60/118 (50%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I  VG  A++ A  +N  L  LN+  N +   G   +  AL +  +L  +NLG   L+
Sbjct: 344 NTIRAVGAQAIAHALIKNNTLTDLNMRLNRLGDDGGQAICSALLRNTTLTSINLGSNDLR 403

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
              A+ +++ L  N+TL  ++L+CN +   GG  L + M+    +  +++   + G+E
Sbjct: 404 EPTATILSQALVQNSTLRKIDLSCNPLGSDGGKQLQEGMEENEIITHMDLRLTECGQE 461


>gi|399497928|emb|CCG20292.1| Ran GTPase activating protein 2 [Solanum bulbocastanum]
          Length = 553

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--DLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITVEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NSLRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNSLRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTDLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTDLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|452822160|gb|EME29182.1| FBox-LRR protein [Galdieria sulphuraria]
          Length = 1076

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 176/414 (42%), Gaps = 61/414 (14%)

Query: 60  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           +AL    +L IL++  C + S  A  +++ L  N+TL+++ +  N+I+ +G   +   +K
Sbjct: 418 KALQANSTLEILDIDSCNMNSDDAKKLSEALKRNSTLDNLCIGINKINSEGARYIADVLK 477

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
             + L ++++  N  G EG   + + +K       L +                      
Sbjct: 478 MNSTLTKLSIYGNNIGSEGARYLSEALKVNSTLKMLCM---------------------- 515

Query: 180 DAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGP 239
              G N N+    + +  NA           HN++            L EL +  N    
Sbjct: 516 ---GRN-NIGSEGTKYISNA---------LMHNST------------LTELCIYGNNIDS 550

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
            G + L++ L+ +    L+  +L  N +G  G  +LSKAL         E +    +++I
Sbjct: 551 QGAKYLSEALKVN--SGLKTFRLGRNSIGSEGAMVLSKAL---------ERNSTLTELYI 599

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N++  EGAK L    ++   L  + +  N I   G  ALS+A + N +L  L L  N
Sbjct: 600 YA-NKIGPEGAKHLFGAMERHSKLTTLCIGINNIGPDGAKALSEALQRNSSLETLQLYAN 658

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
            I  +G   L +AL    +L    +G   + + GA  +++ L  N+TL+ + +  N I  
Sbjct: 659 EIGSQGMKYLSEALEINSALTTFLIGCNDIGNEGAGHLSEALKTNSTLKVLYIYGNNIDA 718

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALV-LEDD 471
            G   L   ++    L ++++  N  G EG   + E L +++ M    + ++DD
Sbjct: 719 TGARYLSDMLRRNLSLIKMHIYGNSIGSEGFNALVEGLKENYTMKELYINIKDD 772



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 157/367 (42%), Gaps = 43/367 (11%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   K+  TL+++ +  N I   G   ++D  + N  L  L++  N I  +GA  L +A
Sbjct: 444 LSEALKRNSTLDNLCIGINKINSEGARYIADVLKMNSTLTKLSIYGNNIGSEGARYLSEA 503

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L +L +G   + S G   I+  L  N+TL ++ +  N I  QG   L +A+K  
Sbjct: 504 LKVNSTLKMLCMGRNNIGSEGTKYISNALMHNSTLTELCIYGNNIDSQGAKYLSEALKVN 563

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           + LK   +  N  G EG   + K ++       L +                   N    
Sbjct: 564 SGLKTFRLGRNSIGSEGAMVLSKALERNSTLTELYI-----------------YANKIGP 606

Query: 182 EGDNSNLSHNDSNHSHNAS-----NQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
           EG   +L      HS   +     N    +  ++ + + Q + SL+T      L L  N 
Sbjct: 607 EGAK-HLFGAMERHSKLTTLCIGINNIGPDGAKALSEALQRNSSLET------LQLYANE 659

Query: 237 FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
            G  G++ L++ L  +   AL    +  N +G  G   LS+AL        K  S   LK
Sbjct: 660 IGSQGMKYLSEALEIN--SALTTFLIGCNDIGNEGAGHLSEAL--------KTNS--TLK 707

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR--HL 354
           V     N ++  GA+ L+ + ++  +L ++ +  N I   G  AL +  +EN  ++  ++
Sbjct: 708 VLYIYGNNIDATGARYLSDMLRRNLSLIKMHIYGNSIGSEGFNALVEGLKENYTMKELYI 767

Query: 355 NLNDNTI 361
           N+ D++I
Sbjct: 768 NIKDDSI 774



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 162/405 (40%), Gaps = 57/405 (14%)

Query: 33  AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 92
           A + N  L  L+++   +    A  L +AL +  +L  L +G   + S GA  IA  L  
Sbjct: 419 ALQANSTLEILDIDSCNMNSDDAKKLSEALKRNSTLDNLCIGINKINSEGARYIADVLKM 478

Query: 93  NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
           N+TL  +++  N I  +G   L +A+K  + LK + +  N  G EG + +   +      
Sbjct: 479 NSTLTKLSIYGNNIGSEGARYLSEALKVNSTLKMLCMGRNNIGSEGTKYISNALMHNSTL 538

Query: 153 AALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN 212
             L +                   N+ D++G    LS     +S   + +   NS  S  
Sbjct: 539 TELCIYG-----------------NNIDSQGAKY-LSEALKVNSGLKTFRLGRNSIGSEG 580

Query: 213 TSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR-----SSCCF------------ 255
               S  +L+  + L EL +  N  GP G + L   +      ++ C             
Sbjct: 581 AMVLSK-ALERNSTLTELYIYANKIGPEGAKHLFGAMERHSKLTTLCIGINNIGPDGAKA 639

Query: 256 ---------ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
                    +LE L+L  N +G  G K LS+AL              AL  F+ G N + 
Sbjct: 640 LSEALQRNSSLETLQLYANEIGSQGMKYLSEALE----------INSALTTFLIGCNDIG 689

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           NEGA  L+   K   TL+ + +  N I   G   LSD    N +L  +++  N+I  +G 
Sbjct: 690 NEGAGHLSEALKTNSTLKVLYIYGNNIDATGARYLSDMLRRNLSLIKMHIYGNSIGSEGF 749

Query: 367 IPLGQALSKLPSLA--ILNLGDCLLKSAGASSIAKYLTDNTTLED 409
             L + L +  ++    +N+ D  + S   S I + L  N  L D
Sbjct: 750 NALVEGLKENYTMKELYINIKDDSIGSRETSLIRELLHRNNCLSD 794



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L+   ++  TL  + +  N I   G   L  A E + KL  L +  N I   GA  L +
Sbjct: 583 VLSKALERNSTLTELYIYANKIGPEGAKHLFGAMERHSKLTTLCIGINNIGPDGAKALSE 642

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL +  SL  L L    + S G   +++ L  N+ L    + CN+I  +G   L +A+K 
Sbjct: 643 ALQRNSSLETLQLYANEIGSQGMKYLSEALEINSALTTFLIGCNDIGNEGAGHLSEALKT 702

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
            + LK + +  N     G   +  +++
Sbjct: 703 NSTLKVLYIYGNNIDATGARYLSDMLR 729


>gi|399498098|emb|CCG20377.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|410034718|ref|XP_525127.3| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
           6 [Pan troglodytes]
          Length = 979

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 119/265 (44%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L+   C 
Sbjct: 712 SHAACSHGLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPGC- 770

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            +  L L   GL    C  +S  L     SS ++   L L       N L + G ++L  
Sbjct: 771 NIRRLWLGRCGLSHECCFDISLVL-----SSNQKLVELDL-----SDNALSDFGIRLLCV 820

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K L   L+++ +  +G+  V  +ALS     N NL HL L  NT+  KG   L + L 
Sbjct: 821 GLKHLLCNLKKLWLVNSGLTSVCCSALSSVLSTNPNLTHLYLRGNTLGDKGIKLLCEGLL 880

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 881 H-PDCKLQVLELDNCNLTSHCCGDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 939

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 940 SCLLQNLGLSEMYFNYETKSALETL 964



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-- 66
           L  L+ + +  +G+  V  +ALS     N  L HL L  NT+  KG   L + L   P  
Sbjct: 826 LCNLKKLWLVNSGLTSVCCSALSSVLSTNPNLTHLYLRGNTLGDKGIKLLCEGLLH-PDC 884

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q
Sbjct: 885 KLQVLELDNCNLTSHCCGDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQ 944

Query: 127 -INVSENQFGEEGVEEMEKL 145
            + +SE  F  E    +E L
Sbjct: 945 NLGLSEMYFNYETKSALETL 964


>gi|399498060|emb|CCG20358.1| Ran GTPase activating protein 2 [Solanum tuberosum]
 gi|399498088|emb|CCG20372.1| Ran GTPase activating protein 2 [Solanum tuberosum]
 gi|399498108|emb|CCG20382.1| Ran GTPase activating protein 2 [Solanum vernei]
 gi|399498118|emb|CCG20387.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   LE        +   G + L +A      L+ L+L DN    +  + L +A
Sbjct: 290 IAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKA 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK  +L  + L    L+  GA +IA  L D+  +L  + +  N+I+ +    +   +  
Sbjct: 350 LSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAA 409

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++++ EN+  +EG  ++ K ++
Sbjct: 410 KQLLAKLSLGENELKDEGAIQIAKALE 436


>gi|395815169|ref|XP_003781107.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Otolemur
            garnettii]
          Length = 1095

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 120/246 (48%), Gaps = 18/246 (7%)

Query: 219  MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            ++L +  RL  L L++NA G  G++ ++D+L++ CC  L+ L L +    +   + LS +
Sbjct: 839  LALISNKRLTHLCLANNALGDSGIKLMSDVLQNPCC-TLQSLVLRHCHFTLLSSEYLSTS 897

Query: 279  -LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHV 336
             LH+      K  + L L     G NRL+++GAK+L   F+     L  +E+    +   
Sbjct: 898  LLHN------KSLTHLDL-----GSNRLQDDGAKLLCDAFRHPSCNLRDLELMGCVLTSA 946

Query: 337  GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGA 394
                L+     N NL  L+L  N +  +G   L  AL + P  +I  LG   C L S   
Sbjct: 947  CCLDLASVVLSNPNLWSLDLGKNDLQDEGVKILCDAL-RHPDCSIQRLGLECCGLTSLSC 1005

Query: 395  SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEM 453
              ++  L+ N  L+ +NL  N++  +G   L +A+K+   KL+ + + +  F EE  + +
Sbjct: 1006 EDLSSTLSSNQRLKKMNLAQNDLRCEGIRKLCQALKSPDCKLQVLGLCKEAFDEEAQKLL 1065

Query: 454  EKLMKS 459
            E +  S
Sbjct: 1066 EAVRVS 1071



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 2/141 (1%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
            K+L H+++  N +   G   L DAF   +  LR L L    +T    + L   +   P+L
Sbjct: 902  KSLTHLDLGSNRLQDDGAKLLCDAFRHPSCNLRDLELMGCVLTSACCLDLASVVLSNPNL 961

Query: 69   AILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
              L+LG   L+  G   +   L   + +++ + L C  ++     DL   + +  +LK++
Sbjct: 962  WSLDLGKNDLQDEGVKILCDALRHPDCSIQRLGLECCGLTSLSCEDLSSTLSSNQRLKKM 1021

Query: 128  NVSENQFGEEGVEEMEKLMKS 148
            N+++N    EG+ ++ + +KS
Sbjct: 1022 NLAQNDLRCEGIRKLCQALKS 1042



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 120/318 (37%), Gaps = 79/318 (24%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEGLADLLRSS-----------------CCF------- 255
            SL     L+ LDL  N  G  GV+ L + L+                   CC        
Sbjct: 726  SLTHNKNLMHLDLKGNDIGDNGVKLLCEALKHPECKLQKLSLESCNLTEVCCLDIFNALI 785

Query: 256  ---ALEELKLNNNGLGITGCKLLSKALH--DCY-ESSKKEGSPLA--------------- 294
               +L  L L+ N L   G KLL +AL    CY E    E   L                
Sbjct: 786  RSQSLIFLNLSTNNLLDDGVKLLCEALRYPKCYLERLSLESCGLTEDVCEDLSLALISNK 845

Query: 295  -LKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
             L       N L + G K+++ V +    TL+ + +       +    LS +   NK+L 
Sbjct: 846  RLTHLCLANNALGDSGIKLMSDVLQNPCCTLQSLVLRHCHFTLLSSEYLSTSLLHNKSLT 905

Query: 353  HLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
            HL+L  N +   GA  L  A  + PS  L  L L  C+L SA    +A  +  N  L  +
Sbjct: 906  HLDLGSNRLQDDGAKLLCDAF-RHPSCNLRDLELMGCVLTSACCLDLASVVLSNPNLWSL 964

Query: 411  NLTCNEISVQG------------------GL-----------DLVKAMKNKTKLKQINVS 441
            +L  N++  +G                  GL           DL   + +  +LK++N++
Sbjct: 965  DLGKNDLQDEGVKILCDALRHPDCSIQRLGLECCGLTSLSCEDLSSTLSSNQRLKKMNLA 1024

Query: 442  ENQFGEEGVEEMEKLMKS 459
            +N    EG+ ++ + +KS
Sbjct: 1025 QNDLRCEGIRKLCQALKS 1042


>gi|320164844|gb|EFW41743.1| hypothetical protein CAOG_06875 [Capsaspora owczarzaki ATCC 30864]
          Length = 217

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 82/163 (50%)

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           AK +A   K   T+  ++M +N I  VG  A++DA + N  L  LNL +N I   GA  +
Sbjct: 32  AKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQENQIGNAGAQAI 91

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
              L    +L  L+LG   +   GA +IA+ L  NTTL  ++L  + I V G   + +A+
Sbjct: 92  AATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEAL 151

Query: 430 KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           K  T LK+  +  +Q  + G + +   +K       L LE+++
Sbjct: 152 KVNTTLKKFGLWRSQIDDAGAQAIAATLKVNKTLTTLFLEENQ 194



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 80/160 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  ++M +N I  VG  A++DA + N  L  LNL +N I   GA  +   
Sbjct: 35  IAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQENQIGNAGAQAIAAT 94

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+LG   +   GA +IA+ L  NTTL  ++L  + I V G   + +A+K  
Sbjct: 95  LKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALKVN 154

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           T LK+  +  +Q  + G + +   +K       L LE+++
Sbjct: 155 TTLKKFGLWRSQIDDAGAQAIAATLKVNKTLTTLFLEENQ 194



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 10/210 (4%)

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L  +  FA  EL LN+  +G    K +++AL       K   +   LK+     N++   
Sbjct: 9   LTHNVKFASWELSLNHELIGDDEAKAIAEAL-------KVNTTVTTLKM---DENQIGAV 58

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA  +A   K   TL  + + +N I + G  A++   + N  L  L+L  N I   GA  
Sbjct: 59  GAHAIADALKVNTTLTWLNLQENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQA 118

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + + L    +L  L+LG+  +  AG ++IA+ L  NTTL+   L  ++I   G   +   
Sbjct: 119 IAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDAGAQAIAAT 178

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +K    L  + + ENQF + G + + + +K
Sbjct: 179 LKVNKTLTTLFLEENQFSDAGAQAIAEALK 208



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 12/207 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           EL L+    G    + +A+ L+ +    +  LK++ N +G  G   ++ AL         
Sbjct: 19  ELSLNHELIGDDEAKAIAEALKVNTT--VTTLKMDENQIGAVGAHAIADALK-----VNT 71

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             + L L+      N++ N GA+ +AA  K   TL  + + QN I  VG  A+++    N
Sbjct: 72  TLTWLNLQ-----ENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVN 126

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L  L+L ++ I   G   + +AL    +L    L    +  AGA +IA  L  N TL 
Sbjct: 127 TTLTSLDLGESPIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDAGAQAIAATLKVNKTLT 186

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKL 435
            + L  N+ S  G   + +A+K  T L
Sbjct: 187 TLFLEENQFSDAGAQAIAEALKVNTAL 213



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + + +N I + G  A++   + N  L  L+L  N I   GA  + + L    +L  
Sbjct: 72  TLTWLNLQENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTS 131

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+LG+  +  AG ++IA+ L  NTTL+   L  ++I   G   +   +K    L  + + 
Sbjct: 132 LDLGESPIGVAGVNAIAEALKVNTTLKKFGLWRSQIDDAGAQAIAATLKVNKTLTTLFLE 191

Query: 131 ENQFGEEGVEEMEKLMK 147
           ENQF + G + + + +K
Sbjct: 192 ENQFSDAGAQAIAEALK 208



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 8/140 (5%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + N  +  L +++N I   GA  +  AL    +L  LNL +  + +AGA +IA 
Sbjct: 34  AIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQENQIGNAGAQAIAA 93

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK---- 144
            L  NTTL +++L  N+I   G   + + ++  T L  +++ E+  G  GV  + +    
Sbjct: 94  TLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEALKV 153

Query: 145 --LMKSFGMAAALVLEDDEG 162
              +K FG+  + +  DD G
Sbjct: 154 NTTLKKFGLWRSQI--DDAG 171



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 57/123 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +AA  K   TL  + + QN I  VG  A+++    N  L  L+L ++ I   G   + +A
Sbjct: 91  IAATLKVNTTLTELSLGQNQIGQVGAQAIAEGLRVNTTLTSLDLGESPIGVAGVNAIAEA 150

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L    L    +  AGA +IA  L  N TL  + L  N+ S  G   + +A+K  
Sbjct: 151 LKVNTTLKKFGLWRSQIDDAGAQAIAATLKVNKTLTTLFLEENQFSDAGAQAIAEALKVN 210

Query: 122 TKL 124
           T L
Sbjct: 211 TAL 213



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L+LN   I    A  + +AL    ++  L + +  + + GA +IA  L  NTTL  +NL 
Sbjct: 20  LSLNHELIGDDEAKAIAEALKVNTTVTTLKMDENQIGAVGAHAIADALKVNTTLTWLNLQ 79

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
            N+I   G   +   +K  T L ++++ +NQ G+ G + +
Sbjct: 80  ENQIGNAGAQAIAATLKVNTTLTELSLGQNQIGQVGAQAI 119


>gi|326675327|ref|XP_002665106.2| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Danio rerio]
          Length = 936

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 87/164 (53%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           +KV    +N + + GAK +A + ++   L  V++  N I  VG   L+ A  ++K++  +
Sbjct: 741 VKVLGLYQNHITDVGAKQVAKIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDI 800

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            +  N I  +GA    +AL   PSL  L+L    + S G  S+A+ L +NT+L  V L  
Sbjct: 801 GMWGNCIGDEGAEAFAEALKNHPSLTNLSLSANGITSHGGRSLAQTLKENTSLHIVWLIQ 860

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N+IS     DL +A ++ + L  + + +N+F  +G  ++ + +K
Sbjct: 861 NKISDDAASDLAEAFRSNSSLTHLMLIDNEFTIDGARQLSEGLK 904



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 22/270 (8%)

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
           +D    N  L H      H   +  +NN N       +   S  T  R     L+D+   
Sbjct: 673 ADCSALNFVLHHR---RKHLGVDMDNNNINDYGVKQLRPSFSKMTVVRFCVNQLTDS--- 726

Query: 239 PIGVEGLAD-LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
             G+E LA+ L+R      ++ L L  N +   G K ++K + +C            L+ 
Sbjct: 727 --GIEVLAEELIRYK---IVKVLGLYQNHITDVGAKQVAKIIEECPH----------LRT 771

Query: 298 FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
              G N + + G K LA+   K K++  + M  N I   G  A ++A + + +L +L+L+
Sbjct: 772 VKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCIGDEGAEAFAEALKNHPSLTNLSLS 831

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N IT  G   L Q L +  SL I+ L    +    AS +A+    N++L  + L  NE 
Sbjct: 832 ANGITSHGGRSLAQTLKENTSLHIVWLIQNKISDDAASDLAEAFRSNSSLTHLMLIDNEF 891

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
           ++ G   L + +K+ T LK++N+  ++  E
Sbjct: 892 TIDGARQLSEGLKDNTTLKEVNIKGSRISE 921



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 76/146 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + ++   L  V++  N I  VG   L+ A  ++K +  + +  N I  +GA    +A
Sbjct: 759 VAKIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCIGDEGAEAFAEA 818

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    + S G  S+A+ L +NT+L  V L  N+IS     DL +A ++ 
Sbjct: 819 LKNHPSLTNLSLSANGITSHGGRSLAQTLKENTSLHIVWLIQNKISDDAASDLAEAFRSN 878

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           + L  + + +N+F  +G  ++ + +K
Sbjct: 879 SSLTHLMLIDNEFTIDGARQLSEGLK 904



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA+   K K++  + M  N I   G  A ++A + +  L +L+L+ N IT  G   L Q 
Sbjct: 787 LASAIHKSKSIFDIGMWGNCIGDEGAEAFAEALKNHPSLTNLSLSANGITSHGGRSLAQT 846

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL I+ L    +    AS +A+    N++L  + L  NE ++ G   L + +K+ 
Sbjct: 847 LKENTSLHIVWLIQNKISDDAASDLAEAFRSNSSLTHLMLIDNEFTIDGARQLSEGLKDN 906

Query: 122 TKLKQINVSENQFGE 136
           T LK++N+  ++  E
Sbjct: 907 TTLKEVNIKGSRISE 921



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V+M  N I   G+  L  +F    K+  +    N +T  G   L + L +   + +L L 
Sbjct: 691 VDMDNNNINDYGVKQLRPSFS---KMTVVRFCVNQLTDSGIEVLAEELIRYKIVKVLGLY 747

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              +   GA  +AK + +   L  V L CN I+  GG  L  A+     +  I +  N  
Sbjct: 748 QNHITDVGAKQVAKIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCI 807

Query: 135 GEEGVEEMEKLMK 147
           G+EG E   + +K
Sbjct: 808 GDEGAEAFAEALK 820



 Score = 45.8 bits (107), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           V+M  N I   G+  L  +F +   +R      N +T  G   L + L +   + +L L 
Sbjct: 691 VDMDNNNINDYGVKQLRPSFSKMTVVR---FCVNQLTDSGIEVLAEELIRYKIVKVLGLY 747

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
              +   GA  +AK + +   L  V L CN I+  GG  L  A+     +  I +  N  
Sbjct: 748 QNHITDVGAKQVAKIIEECPHLRTVKLGCNNITSVGGKYLASAIHKSKSIFDIGMWGNCI 807

Query: 446 GEEGVEEMEKLMK 458
           G+EG E   + +K
Sbjct: 808 GDEGAEAFAEALK 820


>gi|294661100|ref|YP_003572975.1| hypothetical protein Aasi_1477 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336250|gb|ACP20847.1| hypothetical protein Aasi_1477 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 614

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 171/377 (45%), Gaps = 46/377 (12%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           A S   YL  N  +  + L+ N +  QG + L + ++  T +  +++S+NQ G++G+E  
Sbjct: 144 AQSWWPYLQGNN-IHTLGLSWNHLGDQGAIVLAQHLQG-TNVHTVDISDNQIGDQGLEGF 201

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
            K ++   +   ++   + G               D  AEG   +L         +  + 
Sbjct: 202 AKHLQETNVHMVVLSRSEIG---------------DQGAEGFAKHLQGTRV----HVVDL 242

Query: 203 SHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKL 262
           S N    S   +   H+    G ++  LDLS N  G  G E LA  L+ +    L+E+ L
Sbjct: 243 SMNKMGDSGAEALAKHLQ---GTQVHTLDLSMNKIGDQGAEALAKHLQGT---NLQEIDL 296

Query: 263 NNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
             N +   G   L++ L       K     L LK      N++  +GA  L    K  + 
Sbjct: 297 RFNQISDRGAIALAQHL------QKTNIHTLNLK-----SNKIGAQGAIALVQHLKDAR- 344

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           +  +++ +N I   G+ AL+  + +  ++  +NL+ N I+  GA+ L + L +  ++  L
Sbjct: 345 IHTLDLCENKIKDAGVIALAQ-YIKGTSVHTINLSKNKISVLGAMELAKHLQE-TNVHTL 402

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
           NLG  L++   A  + K+L   T +  +NL  N I  QG + L + ++  T ++++ + +
Sbjct: 403 NLGYNLIR---AGQLVKHL-QGTRVHTLNLNGNNIDGQGVIALTQYLEG-TNVQELCLGD 457

Query: 443 NQFGEEGVEEMEKLMKS 459
           NQ G EG   + K ++S
Sbjct: 458 NQMGAEGAIRLCKYLQS 474



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 29/148 (19%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+ AL+  + E   ++ L L DN +  +GAI L + L    +L  L LG   + + GA  
Sbjct: 437 GVIALTQ-YLEGTNVQELCLGDNQMGAEGAIRLCKYLQS-TNLEKLGLGSNEIGNVGAIE 494

Query: 86  IAKYLTDN--------------------------TTLEDVNLTCNEISVQGGLDLVKAMK 119
           +AK L D                           T ++++ L+ NEI  +G + + + ++
Sbjct: 495 LAKLLQDTNVHTLDLSMNEIDDVGAIGIVQHLQGTKVKELRLSFNEIGTEGAIGIAQHLQ 554

Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
             TK++++++  N+  EEG  ++ K ++
Sbjct: 555 G-TKVQELDLGHNRIDEEGAMQLGKYLQ 581


>gi|72389630|ref|XP_845110.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62176653|gb|AAX70756.1| ran GTPase-activating protein, putative [Trypanosoma brucei]
 gi|62360170|gb|AAX80589.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70801644|gb|AAZ11551.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|261328477|emb|CBH11454.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 432

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 15/212 (7%)

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           ++C   L  + L+ N +G  G K L +++         + +P    + I   N++ +EG 
Sbjct: 150 AACHRDLMRVDLSWNKIGPLGTKCLGRSM---------QRNPNCTYILIG--NQIGDEGT 198

Query: 311 KMLAAVFKKL--KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           + L    K+   K    + + +N + + G  A+    E N+ +  ++L+ NT+  +G   
Sbjct: 199 EHLCEALKRYSGKGTSSLNLLRNDVRYRGAKAVGRLIENNEYILDVSLHSNTLGLRGMQE 258

Query: 369 LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLV 426
           +   L+  P+ L  LNL +C+L  +GA  +A  +  D  TLE ++ + N+++  GG+ +V
Sbjct: 259 IRHHLTSAPNRLRSLNLSNCMLGDSGAEELALLIDADLPTLERLSASDNDLTDIGGVAIV 318

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           KA+     L  +N S N FG E VE   KL++
Sbjct: 319 KALMTNNSLVAVNCSGNSFGAETVELTMKLVE 350



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 2/131 (1%)

Query: 19  QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCL 77
           +N + + G  A+    E N+ +  ++L+ NT+  +G   +   L+  P+ L  LNL +C+
Sbjct: 220 RNDVRYRGAKAVGRLIENNEYILDVSLHSNTLGLRGMQEIRHHLTSAPNRLRSLNLSNCM 279

Query: 78  LKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
           L  +GA  +A  +  D  TLE ++ + N+++  GG+ +VKA+     L  +N S N FG 
Sbjct: 280 LGDSGAEELALLIDADLPTLERLSASDNDLTDIGGVAIVKALMTNNSLVAVNCSGNSFGA 339

Query: 137 EGVEEMEKLMK 147
           E VE   KL++
Sbjct: 340 ETVELTMKLVE 350



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 12/168 (7%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           +L   G +++     K + + ++E+  N I   G   L++    N  ++HLNL  N +T 
Sbjct: 42  KLIPRGMQIIGNALMKNRHVVKLELAHNDIGDAGAITLAELLRRNDTIQHLNLAQNKVTD 101

Query: 364 KGAI-----------PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
            G I           P GQA     +L  L L    +  A   +I+K    +  L  V+L
Sbjct: 102 VGGIALASAFIPNVSPNGQAGLWNRTLFTLVLSGNEMGDATLLAISKAAACHRDLMRVDL 161

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           + N+I   G   L ++M+       I +  NQ G+EG E + + +K +
Sbjct: 162 SWNKIGPLGTKCLGRSMQRNPNCTYILIG-NQIGDEGTEHLCEALKRY 208



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 12/146 (8%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAI-----------PLGQALS 63
           +E+  N I   G   L++    N  ++HLNL  N +T  G I           P GQA  
Sbjct: 64  LELAHNDIGDAGAITLAELLRRNDTIQHLNLAQNKVTDVGGIALASAFIPNVSPNGQAGL 123

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
              +L  L L    +  A   +I+K    +  L  V+L+ N+I   G   L ++M+    
Sbjct: 124 WNRTLFTLVLSGNEMGDATLLAISKAAACHRDLMRVDLSWNKIGPLGTKCLGRSMQRNPN 183

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSF 149
              I +  NQ G+EG E + + +K +
Sbjct: 184 CTYILIG-NQIGDEGTEHLCEALKRY 208


>gi|399498064|emb|CCG20360.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 123/292 (42%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        + A+ +  
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEA----ANAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G + L +
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+L+ N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 441 LIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+L+ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|156229388|emb|CAL69642.1| Ran GTPase-activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENKLKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENKLKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399498084|emb|CCG20370.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IA+ L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIARALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IA+ L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIARALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399498090|emb|CCG20373.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|156392719|ref|XP_001636195.1| predicted protein [Nematostella vectensis]
 gi|156223296|gb|EDO44132.1| predicted protein [Nematostella vectensis]
          Length = 218

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 6/183 (3%)

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           LGI G  +  +A     E  +   +   L +F     ++ + GA+ +A+   +  TLE++
Sbjct: 25  LGIRGDNMTPEAGRALGEMFRHNTTITCLSLF---HGKIGDSGAQGIASGLSQNTTLEKI 81

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
           ++   GI   G++AL+   +   N  HL+L+ N I  KGA  + + +     L  L +  
Sbjct: 82  QIENAGIGATGVSALAKVIQ---NATHLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDR 138

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
           C +   G   IAK L+ NT LE++++ C  I  +G  +L +++     L+ + ++ N   
Sbjct: 139 CNIDVLGVRDIAKALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNNIS 198

Query: 447 EEG 449
           E+G
Sbjct: 199 EKG 201



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 3/128 (2%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE +++   GI   G++AL+   +      HL+L+ N I  KGA  + + +     L  
Sbjct: 77  TLEKIQIENAGIGATGVSALAKVIQNAT---HLDLSRNIIGTKGAKAIAKVIENSCKLKY 133

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L +  C +   G   IAK L+ NT LE++++ C  I  +G  +L +++     L+ + ++
Sbjct: 134 LRIDRCNIDVLGVRDIAKALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTIT 193

Query: 131 ENQFGEEG 138
            N   E+G
Sbjct: 194 YNNISEKG 201



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+ ++++A   N  +R L +  + +T +    LG+      ++  L+L    +  +GA  
Sbjct: 8   GVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQG 67

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           IA  L+ NTTLE + +    I   G   L K ++N T L   ++S N  G +G + + K+
Sbjct: 68  IASGLSQNTTLEKIQIENAGIGATGVSALAKVIQNATHL---DLSRNIIGTKGAKAIAKV 124

Query: 457 MK 458
           ++
Sbjct: 125 IE 126



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+ ++++A   N  +R L +  + +T +    LG+      ++  L+L    +  +GA  
Sbjct: 8   GVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQG 67

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA  L+ NTTLE + +    I   G   L K ++N T L   ++S N  G +G + + K+
Sbjct: 68  IASGLSQNTTLEKIQIENAGIGATGVSALAKVIQNATHL---DLSRNIIGTKGAKAIAKV 124

Query: 146 MK 147
           ++
Sbjct: 125 IE 126



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 62/277 (22%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           L  AG +SIA+ L  NTT+  + +  + ++ + G  L +  ++ T +  +++   + G+ 
Sbjct: 4   LGDAGVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDS 63

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSH 197
           G +         G+A+ L         S     E+ + EN        S L+    N +H
Sbjct: 64  GAQ---------GIASGL---------SQNTTLEKIQIENAGIGATGVSALAKVIQNATH 105

Query: 198 NASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAL 257
                                           LDLS N  G  G + +A ++ +SC   L
Sbjct: 106 --------------------------------LDLSRNIIGTKGAKAIAKVIENSC--KL 131

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
           + L+++   + + G + ++KAL        K  +   L V  AG   +++EG   LA   
Sbjct: 132 KYLRIDRCNIDVLGVRDIAKAL-------SKNTNLEELSVACAG---IDDEGMCELARSV 181

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
            K K+L+ + +  N I   G  A+ +A  ++++L HL
Sbjct: 182 AKNKSLQVLTITYNNISEKGKRAIIEACAKSQSLNHL 218



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 62/116 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           ++A+ K ++   H+++ +N I   G  A++   E + KL++L ++   I   G   + +A
Sbjct: 93  VSALAKVIQNATHLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDRCNIDVLGVRDIAKA 152

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           LSK  +L  L++    +   G   +A+ +  N +L+ + +T N IS +G   +++A
Sbjct: 153 LSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNNISEKGKRAIIEA 208


>gi|320166182|gb|EFW43081.1| hypothetical protein CAOG_08213 [Capsaspora owczarzaki ATCC 30864]
          Length = 633

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 4/162 (2%)

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           +F++ + ++ +E AK +A   K   TL ++    N I  VG  A+++A + NK L  L L
Sbjct: 25  LFLSAK-QIGDEEAKAIAEALKVNTTLTQLG---NQIGDVGAQAIAEALKVNKTLTLLYL 80

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
           N N I   GA  + +AL    +L +LNL    L  AGA +I + L  NTTL  + L  N+
Sbjct: 81  NVNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEALKVNTTLAGLGLGENQ 140

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           I   G   + +A+K  T L ++ + +NQ G+ G + + + +K
Sbjct: 141 IGDVGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALK 182



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 69/128 (53%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I  VG  A+++A + NK L  L LN N I   GA  + +AL    +L +LNL    L 
Sbjct: 55  NQIGDVGAQAIAEALKVNKTLTLLYLNVNQIGDAGAQAIAEALQVNKTLTLLNLSANRLG 114

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            AGA +I + L  NTTL  + L  N+I   G   + +A+K  T L ++ + +NQ G+ G 
Sbjct: 115 DAGAQAIGEALKVNTTLAGLGLGENQIGDVGAQAIAEALKVNTTLTELYLWQNQIGDAGA 174

Query: 140 EEMEKLMK 147
           + + + +K
Sbjct: 175 QALAEALK 182



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 64/118 (54%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I   G  A+++A + NK L  LNL+ N +   GA  +G+A
Sbjct: 65  IAEALKVNKTLTLLYLNVNQIGDAGAQAIAEALQVNKTLTLLNLSANRLGDAGAQAIGEA 124

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           L    +LA L LG+  +   GA +IA+ L  NTTL ++ L  N+I   G   L +A+K
Sbjct: 125 LKVNTTLAGLGLGENQIGDVGAQAIAEALKVNTTLTELYLWQNQIGDAGAQALAEALK 182


>gi|399498076|emb|CCG20366.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   LE        +   G + L +A      L+ L+L DN    +  + L +A
Sbjct: 290 IAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKA 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK  +L  + L    L+  GA +IA  L D+  +L  + +  N+I+ +    +   +  
Sbjct: 350 LSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAA 409

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++++ EN+  +EG  ++ K ++
Sbjct: 410 KQLLAKLSLGENELKDEGAIQIAKALE 436


>gi|397488695|ref|XP_003815386.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
           2 [Pan paniscus]
          Length = 979

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L+   C 
Sbjct: 712 SHAACSHGLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPGC- 770

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            +  L L   GL    C  +S  L     SS ++   L L       N L + G ++L  
Sbjct: 771 NIRRLWLGRCGLSHECCFDISLVL-----SSNQKLVELDL-----SDNALGDFGIRLLCV 820

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K L   L+++ +  +G+  V  +ALS     N+NL HL L  NT+  KG   L + L 
Sbjct: 821 GLKHLLCNLKKLWLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLL 880

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 881 H-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 939

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 940 SCLLQNLGLSEMYFNYETKSALETL 964



 Score = 42.0 bits (97), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-- 66
           L  L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P  
Sbjct: 826 LCNLKKLWLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDC 884

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q
Sbjct: 885 KLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQ 944

Query: 127 -INVSENQFGEEGVEEMEKL 145
            + +SE  F  E    +E L
Sbjct: 945 NLGLSEMYFNYETKSALETL 964


>gi|399498110|emb|CCG20383.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497836|emb|CCG20246.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKLLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  +  L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 66/145 (45%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+ +     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALV 156
               +EG   M   +K    + A++
Sbjct: 364 LNLEDEGAIAMANALKDSAPSLAVL 388


>gi|399498020|emb|CCG20338.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKLLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  +L    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497954|emb|CCG20305.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +G I +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNCISEEGVDELKEIFK 492



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G+ A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNCISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 38.1 bits (87), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 59/128 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+ +     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEGV 139
               +EGV
Sbjct: 364 LNLEDEGV 371


>gi|399497950|emb|CCG20303.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +G I +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G+ A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|320163781|gb|EFW40680.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 622

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 83/164 (50%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L V   G  ++     K LA       TL  +++    I HV I A++ A + N  L  L
Sbjct: 27  LTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLGHTEIDHVDIQAIAGALKVNTTLTWL 86

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
           NL +N I   GA  + +AL    ++  L+L    ++  GA +IA+ L  NTTL ++NL+ 
Sbjct: 87  NLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNLSQ 146

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +EI   GG  +  A+K    L ++++ EN  G+ G + + + +K
Sbjct: 147 DEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEALK 190



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 12/242 (4%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           + L +   G  G   +A+ L+ +    +  L L N  +G+   K L++AL+         
Sbjct: 2   ISLREKQIGEAGAHAIAEALKVNKTLTV--LDLGNRQIGVAAVKALAEALN--------- 50

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
                L     G   +++   + +A   K   TL  + + +N I  VG  A+++A + NK
Sbjct: 51  -VSTTLTTLDLGHTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNK 109

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            +  L+L  N I  +GA  + +AL    +L  LNL    +   G  +IA  L  N TL  
Sbjct: 110 TVTKLDLQQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTK 169

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           ++L  N I   G   + +A+K  T L  +++  NQ G++G + + + +K       L L+
Sbjct: 170 LDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQIGDDGAKGIAEGLKVNKTLTFLYLK 229

Query: 470 DD 471
           D+
Sbjct: 230 DN 231



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 75/137 (54%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++    I HV I A++ A + N  L  LNL +N I   GA  + +AL    ++  
Sbjct: 54  TLTTLDLGHTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTK 113

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    ++  GA +IA+ L  NTTL ++NL+ +EI   GG  +  A+K    L ++++ 
Sbjct: 114 LDLQQNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLF 173

Query: 131 ENQFGEEGVEEMEKLMK 147
           EN  G+ G + + + +K
Sbjct: 174 ENPIGDAGAQAIGEALK 190



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 22/207 (10%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L     L  LDL       + ++ +A  L+ +    L  L L  N +G  G + +++AL
Sbjct: 48  ALNVSTTLTTLDLGHTEIDHVDIQAIAGALKVNTT--LTWLNLGENRIGDVGAEAIAEAL 105

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L L+     +N++E+EGA+ +A   K   TL  + + Q+ I  VG  
Sbjct: 106 -----KVNKTVTKLDLQ-----QNQIEDEGAQAIAEALKVNTTLTELNLSQDEIGGVGGQ 155

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL---SKLPSLAILN--LGDCLLKSAGA 394
           A++DA + NK L  L+L +N I   GA  +G+AL   + LPSL + N  +GD      GA
Sbjct: 156 AIADALKVNKTLTKLDLFENPIGDAGAQAIGEALKVNTTLPSLHLYNNQIGD-----DGA 210

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQG 421
             IA+ L  N TL  + L  N ++  G
Sbjct: 211 KGIAEGLKVNKTLTFLYLKDNFLTNAG 237



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 79/159 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + +N I  VG  A+++A + NK +  L+L  N I  +GA  + +A
Sbjct: 73  IAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQAIAEA 132

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNL    +   G  +IA  L  N TL  ++L  N I   G   + +A+K  
Sbjct: 133 LKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEALKVN 192

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
           T L  +++  NQ G++G + + + +K       L L+D+
Sbjct: 193 TTLPSLHLYNNQIGDDGAKGIAEGLKVNKTLTFLYLKDN 231



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 73/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  +++    I    + AL++A   +  L  L+L    I +     +  A
Sbjct: 17  IAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLGHTEIDHVDIQAIAGA 76

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  LNLG+  +   GA +IA+ L  N T+  ++L  N+I  +G   + +A+K  
Sbjct: 77  LKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQIEDEGAQAIAEALKVN 136

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L ++N+S+++ G  G + +   +K
Sbjct: 137 TTLTELNLSQDEIGGVGGQAIADALK 162



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 23/238 (9%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           ++L +  I   GA  + +AL    +L +L+LG+  +  A   ++A+ L  +TTL  ++L 
Sbjct: 2   ISLREKQIGEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLG 61

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEG 162
             EI       +  A+K  T L  +N+ EN+ G+ G E + + +K       L       
Sbjct: 62  HTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKL------- 114

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SL 221
              D +Q++  +E   + AE    N +  + N S           ++      Q+   +L
Sbjct: 115 ---DLQQNQIEDEGAQAIAEALKVNTTLTELNLSQ----------DEIGGVGGQAIADAL 161

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           K    L +LDL +N  G  G + + + L+ +    L  L L NN +G  G K +++ L
Sbjct: 162 KVNKTLTKLDLFENPIGDAGAQAIGEALKVNTT--LPSLHLYNNQIGDDGAKGIAEGL 217



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%)

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           + + +  I   G  A+++A + NK L  L+L +  I       L +AL+   +L  L+LG
Sbjct: 2   ISLREKQIGEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLG 61

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
              +      +IA  L  NTTL  +NL  N I   G   + +A+K    + ++++ +NQ 
Sbjct: 62  HTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQI 121

Query: 446 GEEGVEEMEKLMKSFGMAAALVLEDDE 472
            +EG + + + +K       L L  DE
Sbjct: 122 EDEGAQAIAEALKVNTTLTELNLSQDE 148



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           + + +  I   G  A+++A + NK L  L+L +  I       L +AL+   +L  L+LG
Sbjct: 2   ISLREKQIGEAGAHAIAEALKVNKTLTVLDLGNRQIGVAAVKALAEALNVSTTLTTLDLG 61

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              +      +IA  L  NTTL  +NL  N I   G   + +A+K    + ++++ +NQ 
Sbjct: 62  HTEIDHVDIQAIAGALKVNTTLTWLNLGENRIGDVGAEAIAEALKVNKTVTKLDLQQNQI 121

Query: 135 GEEGVEEMEKLMKSFGMAAALVLEDDE 161
            +EG + + + +K       L L  DE
Sbjct: 122 EDEGAQAIAEALKVNTTLTELNLSQDE 148



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 10/114 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + Q+ I  VG  A++DA + NK L  L+L +N I   GA  +G+A
Sbjct: 129 IAEALKVNTTLTELNLSQDEIGGVGGQAIADALKVNKTLTKLDLFENPIGDAGAQAIGEA 188

Query: 62  L---SKLPSLAILN--LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
           L   + LPSL + N  +GD      GA  IA+ L  N TL  + L  N ++  G
Sbjct: 189 LKVNTTLPSLHLYNNQIGD-----DGAKGIAEGLKVNKTLTFLYLKDNFLTNAG 237


>gi|399498032|emb|CCG20344.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +G I +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G+ A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497866|emb|CCG20261.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497888|emb|CCG20272.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497910|emb|CCG20283.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497918|emb|CCG20287.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497976|emb|CCG20316.1| Ran GTPase activating protein 2 [Solanum phureja]
 gi|399497978|emb|CCG20317.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   LE        +   G + L +A      L+ L+L DN    +  + L +A
Sbjct: 290 IAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKA 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK  +L  + L    L+  GA +IA  L D+  +L  + +  N+I+ +    +   +  
Sbjct: 350 LSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAA 409

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++++ EN+  +EG  ++ K ++
Sbjct: 410 KQLLAKLSLGENELKDEGAIQIAKALE 436


>gi|399497984|emb|CCG20320.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +G I +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G+ A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497842|emb|CCG20249.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 122/292 (41%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L   +LSDNA G  GV     LL+S     LEEL L N+G+        + A+ +  
Sbjct: 213 GSNLKFPNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEA----ANAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S+KK      LKV     N   +EGA  +A + K+   LE        +   G + L +
Sbjct: 267 PSTKK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+++ N +   G   L + + +K + K +NVS N   EEGV+E++++ K
Sbjct: 441 LIEVDMSSNALRRAGARVLAQTVLHKEEFKLLNVSGNFISEEGVDELKEIFK 492



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NVS N   EEGV+E++++ K
Sbjct: 473 NVSGNFISEEGVDELKEIFK 492



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+   +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFPNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTKKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     KKL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+  NL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFPNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTKK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497906|emb|CCG20281.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 123/292 (42%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        + A+ +  
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEA----ANAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G + L +
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYPSYLNLEDEGAIAIANTLKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+L+ N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 441 LIEVDLSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+L+ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDLSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497968|emb|CCG20312.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKLLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  +L    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|188536116|ref|NP_001120933.1| NACHT, LRR and PYD domains-containing protein 3 isoform c [Homo
           sapiens]
 gi|168275792|dbj|BAG10616.1| NACHT, LRR and PYD domains-containing protein 3 [synthetic
           construct]
          Length = 979

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L+   C 
Sbjct: 712 SHAACSHGLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPGC- 770

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            +  L L   GL    C  +S  L     SS ++   L L       N L + G ++L  
Sbjct: 771 NIRRLWLGRCGLSHECCFDISLVL-----SSNQKLVELDL-----SDNALGDFGIRLLCV 820

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K L   L+++ +  +G+  V  +ALS     N+NL HL L  NT+  KG   L + L 
Sbjct: 821 GLKHLLCNLKKLWLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLL 880

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 881 H-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 939

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 940 SCLLQNLGLSEMYFNYETKSALETL 964



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-- 66
           L  L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P  
Sbjct: 826 LCNLKKLWLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDC 884

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q
Sbjct: 885 KLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQ 944

Query: 127 -INVSENQFGEEGVEEMEKL 145
            + +SE  F  E    +E L
Sbjct: 945 NLGLSEMYFNYETKSALETL 964


>gi|149068414|gb|EDM17966.1| rCG39476, isoform CRA_a [Rattus norvegicus]
          Length = 334

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 46/273 (16%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L++   LV L+LS N+    GV+ L ++L +  C  LE L L + GL   GC++LS AL
Sbjct: 23  ALQSNRSLVFLNLSTNSLSNDGVKSLCEVLENPNC-PLERLALASCGLTKVGCEVLSSAL 81

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGI 338
                +  K  + L L       N LE+EG ++L+   +  + TL+ + +       +G 
Sbjct: 82  -----TKTKRLTHLCL-----AHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGS 131

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASS 396
             LS A + NK+L HL+L  N +   G   L Q L + P+  +  L L  C+L S     
Sbjct: 132 EHLSTALQNNKSLIHLDLGFNKLADSGVKLLCQTLQQ-PNCNLQELELMGCVLTSEACGD 190

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGL------------------------------DLV 426
           +A  L +N+ L +++L  N I    GL                              DL+
Sbjct: 191 LASVLVNNSNLWNLDLG-NNILDDAGLNILCEALRNPNCQIRRLGLENCGLTPGCCQDLL 249

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             + N   + Q+N+ +N    E +  + K+++S
Sbjct: 250 DLLSNNQSVIQMNLMKNSLDYEAIRNLCKVLRS 282



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 14/164 (8%)

Query: 261 KLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL 320
           +L +  L +T C+ LSKAL           S  +L       N L N+G K L  V +  
Sbjct: 6   RLESCDLNVTHCQNLSKALQ----------SNRSLVFLNLSTNSLSNDGVKSLCEVLENP 55

Query: 321 KT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-- 377
              LER+ +   G+  VG   LS A  + K L HL L  N +  +G   L   L + P  
Sbjct: 56  NCPLERLALASCGLTKVGCEVLSSALTKTKRLTHLCLAHNVLEDEGIELLSYTL-RHPRC 114

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
           +L  L L  C     G+  ++  L +N +L  ++L  N+++  G
Sbjct: 115 TLQSLVLRCCYFTPIGSEHLSTALQNNKSLIHLDLGFNKLADSG 158


>gi|399498058|emb|CCG20357.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   LE        +   G + L +A      L+ L+L DN    +  + L +A
Sbjct: 290 IAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKA 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK  +L  + L    L+  GA +IA  L D+  +L  + +  N+I+ +    +   +  
Sbjct: 350 LSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAA 409

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++++ EN+  +EG  ++ K ++
Sbjct: 410 KQLLAKLSLGENELKDEGAIQIAKALE 436


>gi|399498030|emb|CCG20343.1| Ran GTPase activating protein 2 [Solanum stenotomum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399497982|emb|CCG20319.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|357603032|gb|EHJ63599.1| putative ran gtpase-activating protein [Danaus plexippus]
          Length = 371

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 43/59 (72%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           ++ GARL  LDLSDNAFGPIGVEGLA LL+S  C  L+ ++L++N +G   C  L +AL
Sbjct: 107 IEAGARLTLLDLSDNAFGPIGVEGLAKLLQSEVCSELQSIELSHNEIGREACMQLVEAL 165


>gi|294718617|gb|ADF32021.1| leucine rich repeat containing protein 2 [Azumapecten farreri]
          Length = 425

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 15/234 (6%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDL  N    +G + +A LL  +    L+ L L  N +   G + ++KALH      K E
Sbjct: 82  LDLRYNDLTNVGAKHIAKLLEETV--TLKYLNLMCNEIESEGAEAIAKALH------KNE 133

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
               +L+V     N++ N G    A + +  K LE +++    +    + AL      N 
Sbjct: 134 ----SLRVLRLNGNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNS 189

Query: 350 NLRHLNLNDNTITY---KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            L+ LN+N   +     +  +   + L    SL  L+L    ++  GA+ +A+ L DN +
Sbjct: 190 TLKALNVNRPLLFSCQEETTVHFAKMLKTNTSLEELHLQKYDMRDFGATRLAENLMDNMS 249

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
              ++L+CN I+  G  +L K +KN T +K +++  N+  ++G   + + + ++
Sbjct: 250 FTYLDLSCNRITRDGTKELAKVLKNNTSIKILDLGFNRLEDDGAMHLAEALATY 303



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 125/301 (41%), Gaps = 37/301 (12%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           L + GA  IAK L +  TL+ +NL CNEI  +G   + KA+     L+ + ++ N+ G  
Sbjct: 89  LTNVGAKHIAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLNGNKIGNR 148

Query: 138 GVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDN----SNLSHNDS 193
           G           GM  A +L+ +        +  E+ +  D+D   +       + H +S
Sbjct: 149 G-----------GMCFAQMLQIN--------KVLEALDLGDTDMTIEAVIALPTVLHRNS 189

Query: 194 NHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSC 253
                  N+    S Q   T + + M LKT   L EL L        G   LA+ L  + 
Sbjct: 190 TLKALNVNRPLLFSCQEETTVHFAKM-LKTNTSLEELHLQKYDMRDFGATRLAENLMDNM 248

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
            F    L L+ N +   G K L+K L +            ++K+   G NRLE++GA  L
Sbjct: 249 SFTY--LDLSCNRITRDGTKELAKVLKN----------NTSIKILDLGFNRLEDDGAMHL 296

Query: 314 AAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           A        TLE + +  N I + G+ A +DA + N  L  + +  N +     I     
Sbjct: 297 AEALATYNTTLETLVVASNNIGNKGLCASADAMKTNTTLTSIFIWGNMLEEPACIAFASL 356

Query: 373 L 373
           L
Sbjct: 357 L 357



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 16/219 (7%)

Query: 250 RSSCCFA--------LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           R   CFA        LE L L +  + I     L   LH       +  +  AL V    
Sbjct: 148 RGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLH-------RNSTLKALNVNRPL 200

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
               + E     A + K   +LE + + +  +   G T L++   +N +  +L+L+ N I
Sbjct: 201 LFSCQEETTVHFAKMLKTNTSLEELHLQKYDMRDFGATRLAENLMDNMSFTYLDLSCNRI 260

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQ 420
           T  G   L + L    S+ IL+LG   L+  GA  +A+ L T NTTLE + +  N I  +
Sbjct: 261 TRDGTKELAKVLKNNTSIKILDLGFNRLEDDGAMHLAEALATYNTTLETLVVASNNIGNK 320

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           G      AMK  T L  I +  N   E        L+ S
Sbjct: 321 GLCASADAMKTNTTLTSIFIWGNMLEEPACIAFASLLDS 359



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 1/148 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A + K   +LE + + +  +   G T L++   +N    +L+L+ N IT  G   L + 
Sbjct: 212 FAKMLKTNTSLEELHLQKYDMRDFGATRLAENLMDNMSFTYLDLSCNRITRDGTKELAKV 271

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    S+ IL+LG   L+  GA  +A+ L T NTTLE + +  N I  +G      AMK 
Sbjct: 272 LKNNTSIKILDLGFNRLEDDGAMHLAEALATYNTTLETLVVASNNIGNKGLCASADAMKT 331

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
            T L  I +  N   E        L+ S
Sbjct: 332 NTTLTSIFIWGNMLEEPACIAFASLLDS 359



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 3/143 (2%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITY---KGAIPLGQALSKLP 66
           K LE +++    +    + AL      N  L+ LN+N   +     +  +   + L    
Sbjct: 161 KVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLLFSCQEETTVHFAKMLKTNT 220

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
           SL  L+L    ++  GA+ +A+ L DN +   ++L+CN I+  G  +L K +KN T +K 
Sbjct: 221 SLEELHLQKYDMRDFGATRLAENLMDNMSFTYLDLSCNRITRDGTKELAKVLKNNTSIKI 280

Query: 127 INVSENQFGEEGVEEMEKLMKSF 149
           +++  N+  ++G   + + + ++
Sbjct: 281 LDLGFNRLEDDGAMHLAEALATY 303



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 9/175 (5%)

Query: 294 ALKVFIAGRN------RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
           ++ +++AG N      RL +  A+ L         +  +++  N + +VG   ++   EE
Sbjct: 44  SMDLYLAGNNKLLTEKRLVDSDAEALCKTLSNNTYVHGLDLRYNDLTNVGAKHIAKLLEE 103

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
              L++LNL  N I  +GA  + +AL K  SL +L L    + + G    A+ L  N  L
Sbjct: 104 TVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLNGNKIGNRGGMCFAQMLQINKVL 163

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF---GEEGVEEMEKLMKS 459
           E ++L   +++++  + L   +   + LK +NV+        EE      K++K+
Sbjct: 164 EALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLLFSCQEETTVHFAKMLKT 218



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +++  N + +VG   ++   EE   L++LNL  N I  +GA  + +AL K  SL +L L 
Sbjct: 82  LDLRYNDLTNVGAKHIAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLN 141

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              + + G    A+ L  N  LE ++L   +++++  + L   +   + LK +NV+    
Sbjct: 142 GNKIGNRGGMCFAQMLQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLL 201

Query: 135 ---GEEGVEEMEKLMKS 148
               EE      K++K+
Sbjct: 202 FSCQEETTVHFAKMLKT 218



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 10/152 (6%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + ++  TL+++ +  N I   G  A++ A  +N+ LR L LN N I  +G +   Q 
Sbjct: 97  IAKLLEETVTLKYLNLMCNEIESEGAEAIAKALHKNESLRVLRLNGNKIGNRGGMCFAQM 156

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN------LTCNEISVQGGLDLV 115
           L     L  L+LGD  +      ++   L  N+TL+ +N       +C E   +  +   
Sbjct: 157 LQINKVLEALDLGDTDMTIEAVIALPTVLHRNSTLKALNVNRPLLFSCQE---ETTVHFA 213

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEM-EKLM 146
           K +K  T L+++++ +    + G   + E LM
Sbjct: 214 KMLKTNTSLEELHLQKYDMRDFGATRLAENLM 245


>gi|405958461|gb|EKC24588.1| hypothetical protein CGI_10024376 [Crassostrea gigas]
          Length = 582

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 139/324 (42%), Gaps = 27/324 (8%)

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           T++K     E QF E  VE+ E    SF    ++ L+D      +  + E  EE+ D+D 
Sbjct: 82  TEIKPTEYQEVQF-EVDVEQGED---SFSEEESVELKD---LVVEPIEAEPKEEDYDTDL 134

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
           E +     H+ S  SH          NQ         M      +  EL +  +  GP  
Sbjct: 135 EIEEEAFVHDTSGRSHYTKI-----CNQLGLVPINYFMR---HIQDTELAMRYHGLGPSA 186

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
              +A +L+ +    LE+L L  N +   G + +++ L         E +     V +A 
Sbjct: 187 ARAIALVLKDT--ITLEKLDLRGNWIEGEGGEAVARML---------EENDYVTDVCLAD 235

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
            NRL   GA+ L  +      L R+++  NG   V    ++ A E NK L+ LNL+ N  
Sbjct: 236 -NRLGLMGAQSLCRMLNTNAGLRRLDISDNGFGTVEAAVIAQALETNKYLKVLNLSHNRF 294

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             +    LG A+     L +L+L    L+  GA S+AK + +N  L+  +L  N    +G
Sbjct: 295 DEQAGEILGPAIGANDILDVLDLSWNCLRQKGAISVAKGIKENVRLKKCSLAWNGFGPEG 354

Query: 422 GLDLVKAMKNKTKLKQINVSENQF 445
           G  +  A+     L++I++S N+ 
Sbjct: 355 GAAIADALMTNNSLQEIDISGNRL 378



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 20/207 (9%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL------------ 279
           L+DN  G +G + L  +L ++    L  L +++NG G     ++++AL            
Sbjct: 233 LADNRLGLMGAQSLCRMLNTNA--GLRRLDISDNGFGTVEAAVIAQALETNKYLKVLNLS 290

Query: 280 HDCYESSKKE------GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           H+ ++    E      G+   L V     N L  +GA  +A   K+   L++  +  NG 
Sbjct: 291 HNRFDEQAGEILGPAIGANDILDVLDLSWNCLRQKGAISVAKGIKENVRLKKCSLAWNGF 350

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G  A++DA   N +L+ ++++ N ++   AI + +A+    ++ IL +G+ LL +AG
Sbjct: 351 GPEGGAAIADALMTNNSLQEIDISGNRLSADVAIKVAKAIMSNDNIRILKMGNNLLTTAG 410

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           A ++AK + ++ + E   L   ++ V+
Sbjct: 411 AIALAKAINESESSEMEELDLTDVPVE 437



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  NG   V    ++ A E NK L+ LNL+ N    +    LG A+     L +L
Sbjct: 256 LRRLDISDNGFGTVEAAVIAQALETNKYLKVLNLSHNRFDEQAGEILGPAIGANDILDVL 315

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    L+  GA S+AK + +N  L+  +L  N    +GG  +  A+     L++I++S 
Sbjct: 316 DLSWNCLRQKGAISVAKGIKENVRLKKCSLAWNGFGPEGGAAIADALMTNNSLQEIDISG 375

Query: 132 NQF 134
           N+ 
Sbjct: 376 NRL 378



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 53/114 (46%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           +G  +L      N  LR L+++DN      A  + QAL     L +LNL           
Sbjct: 241 MGAQSLCRMLNTNAGLRRLDISDNGFGTVEAAVIAQALETNKYLKVLNLSHNRFDEQAGE 300

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
            +   +  N  L+ ++L+ N +  +G + + K +K   +LK+ +++ N FG EG
Sbjct: 301 ILGPAIGANDILDVLDLSWNCLRQKGAISVAKGIKENVRLKKCSLAWNGFGPEG 354



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 54/98 (55%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+   +  NG    G  A++DA   N  L+ ++++ N ++   AI + +A+    ++ IL
Sbjct: 340 LKKCSLAWNGFGPEGGAAIADALMTNNSLQEIDISGNRLSADVAIKVAKAIMSNDNIRIL 399

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 109
            +G+ LL +AGA ++AK + ++ + E   L   ++ V+
Sbjct: 400 KMGNNLLTTAGAIALAKAINESESSEMEELDLTDVPVE 437


>gi|399498040|emb|CCG20348.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +G I +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLDLEDEGVIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G+ A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 38.1 bits (87), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 59/128 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+ +     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEGV 139
               +EGV
Sbjct: 364 LDLEDEGV 371


>gi|62087362|dbj|BAD92128.1| Cryopyrin deletion 4 isoform variant [Homo sapiens]
          Length = 983

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L+   C 
Sbjct: 716 SHAACSHGLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPGC- 774

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            +  L L   GL    C  +S  L     SS ++   L L       N L + G ++L  
Sbjct: 775 NIRRLWLGRCGLSHECCFDISLVL-----SSNQKLVELDL-----SDNALGDFGIRLLCV 824

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K L   L+++ +  +G+  V  +ALS     N+NL HL L  NT+  KG   L + L 
Sbjct: 825 GLKHLLCNLKKLWLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLL 884

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 885 H-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 943

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 944 SCLLQNLGLSEMYFNYETKSALETL 968



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-- 66
           L  L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P  
Sbjct: 830 LCNLKKLWLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDC 888

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q
Sbjct: 889 KLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQ 948

Query: 127 -INVSENQFGEEGVEEMEKL 145
            + +SE  F  E    +E L
Sbjct: 949 NLGLSEMYFNYETKSALETL 968


>gi|320168153|gb|EFW45052.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 866

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 12/203 (5%)

Query: 257 LEELKLNNNGLGITGCKLLSKALH-DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           + ELKL  N +   G + +++A+  +C            L V     NR+ + GA+  A 
Sbjct: 270 MTELKLGGNLIADVGARAIAEAVRANC-----------TLTVVDLTENRIGDAGARAFAE 318

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
             K   TL ++++ +N I   G  A+++A + NK L  L L  N I   GA  +  AL  
Sbjct: 319 TLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIGAAGAQAIADALKV 378

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L  L L    +   GA +IA+ L  NTTL  + L  N+I+  G   L +A+K  T +
Sbjct: 379 NTTLTDLALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTTV 438

Query: 436 KQINVSENQFGEEGVEEMEKLMK 458
            ++++  NQ G+ G   + + +K
Sbjct: 439 TKLDLGSNQIGDAGARAIAEALK 461



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 12/236 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           ++K    + EL L  N    +G   +A+ +R++C   L  + L  N +G  G +  ++ L
Sbjct: 263 AIKVNTTMTELKLGGNLIADVGARAIAEAVRANC--TLTVVDLTENRIGDAGARAFAETL 320

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                 +K +             N++ + GA+ +A   K  KTL  + + QN I   G  
Sbjct: 321 KVNNTLTKLD----------LDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIGAAGAQ 370

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A++DA + N  L  L L  N I   GA  + +AL    +L  L L +  +   GA ++A+
Sbjct: 371 AIADALKVNTTLTDLALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALAE 430

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            L  NTT+  ++L  N+I   G   + +A+K    L  + ++ N    +G+    +
Sbjct: 431 ALKANTTVTKLDLGSNQIGDAGARAIAEALKVNETLTMLYLNNNFLTTDGIAAFRQ 486



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 70/137 (51%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  +++ +N I   G  A+++A + NK L  L L  N I   GA  +  AL    +L  
Sbjct: 325 TLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIGAAGAQAIADALKVNTTLTD 384

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    +   GA +IA+ L  NTTL  + L  N+I+  G   L +A+K  T + ++++ 
Sbjct: 385 LALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTTVTKLDLG 444

Query: 131 ENQFGEEGVEEMEKLMK 147
            NQ G+ G   + + +K
Sbjct: 445 SNQIGDAGARAIAEALK 461



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 86/178 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  +++  N I  VG  A+++A   N  L  ++L +N I   GA    + 
Sbjct: 260 VAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLTENRIGDAGARAFAET 319

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +  AGA +IA+ L  N TL  + L  N+I   G   +  A+K  
Sbjct: 320 LKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQNQIGAAGAQAIADALKVN 379

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS 179
           T L  + + +N+ G++G + + + ++       L L +++  C+  +   E+ + N +
Sbjct: 380 TTLTDLALYQNKIGDDGAQAIAEALEVNTTLTKLYLWENQITCTGAQALAEALKANTT 437



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 53/104 (50%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + N  +  L L  N I   GA  + +A+    +L +++L +  +  AGA + A+
Sbjct: 259 AVAEAIKVNTTMTELKLGGNLIADVGARAIAEAVRANCTLTVVDLTENRIGDAGARAFAE 318

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
            L  N TL  ++L  N+I   G   + +A+K    L  + + +N
Sbjct: 319 TLKVNNTLTKLDLDENQIGDAGAQAIAEALKVNKTLTTLGLWQN 362


>gi|440911068|gb|ELR60794.1| hypothetical protein M91_01512, partial [Bos grunniens mutus]
          Length = 478

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 127/254 (50%), Gaps = 23/254 (9%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   ++ L+L+DN     G+  L ++L+ +  + L+E+ +++N LG+ G ++LS+ 
Sbjct: 110 IALVSNTTVLTLELADNCIMEEGILSLVEMLQEN--YYLQEMNVSDNDLGLEGARILSEF 167

Query: 279 LHDCYES----------SKKEGSPL---------ALKVFIAGRNRLENEGAKMLAAVFKK 319
           L +   S           K+E + L          +K      N+  ++  + L  +   
Sbjct: 168 LQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAI 227

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L+ +++  N +Y  G+ AL +    N +L+ L+L+ N+   +GA  LG+ L     L
Sbjct: 228 NVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYL 287

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
             L+L    + + G S I++ L  N +L+ + L  N IS+ G + L+ ++K   K++++ 
Sbjct: 288 TYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGAVLLILSIKRNPKSRMED 347

Query: 438 INVSENQFGEEGVE 451
           I++S     E+ V+
Sbjct: 348 IDISNVLVSEQFVK 361



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 71/131 (54%), Gaps = 2/131 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N +Y  G+ AL +    N  L+ L+L+ N+   +GA  LG+ L     L  L
Sbjct: 231 LQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYLTYL 290

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           +L    + + G S I++ L  N +L+ + L  N IS+ G + L+ ++K   K++++ I++
Sbjct: 291 DLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGAVLLILSIKRNPKSRMEDIDI 350

Query: 130 SENQFGEEGVE 140
           S     E+ V+
Sbjct: 351 SNVLVSEQFVK 361



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 29/279 (10%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NTT+  + L  N I  +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILS 135

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++NVS+N  G EG   + + +++    ++L      G    EE  E  
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQN--NTSSLFSLQLSGNNFKEESAELF 193

Query: 174 EEENDSDAEGDNSNLSHN---DSNHSHNASNQSHNNSNQSHNTSNQSHM----------S 220
            +   ++    + +LSHN   D    +     + N   QS + S  +H+           
Sbjct: 194 CQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVGLQSLDLS-WNHLYIRGVVALCNG 252

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L++   L +LDLS N+FG  G   L ++LR +    L  L L++N +   G   +S+AL 
Sbjct: 253 LRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNS--YLTYLDLSSNNITNDGLSKISRAL- 309

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           +  ES K       LK+F+   N +  +GA +L    K+
Sbjct: 310 ELNESLK------VLKLFL---NPISMDGAVLLILSIKR 339



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 29/179 (16%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           G K +A       T+  +E+  N I   GI +L +  +EN  L+ +N++DN +  +GA  
Sbjct: 104 GTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYLQEMNVSDNDLGLEGARI 163

Query: 369 LG-----------------------------QALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L                              QALS    +  L+L            + +
Sbjct: 164 LSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQ 223

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N  L+ ++L+ N + ++G + L   +++   LK++++S N FG EG   + ++++
Sbjct: 224 MLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLR 282



 Score = 45.1 bits (105), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 29/166 (17%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLG----------- 59
           T+  +E+  N I   GI +L +  +EN  L+ +N++DN +  +GA  L            
Sbjct: 117 TVLTLELADNCIMEEGILSLVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLF 176

Query: 60  ------------------QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
                             QALS    +  L+L            + + L  N  L+ ++L
Sbjct: 177 SLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVGLQSLDL 236

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           + N + ++G + L   +++   LK++++S N FG EG   + ++++
Sbjct: 237 SWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLR 282



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G +P+   +  +   + +NL    L   G  +IA  L  NTT+  + L  N I  +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCIMEEGILS 135

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           LV+ ++    L+++NVS+N  G EG   + + ++
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQ 169


>gi|399497846|emb|CCG20251.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399498072|emb|CCG20364.1| Ran GTPase activating protein 2 [Solanum tuberosum]
 gi|399498074|emb|CCG20365.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 123/292 (42%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +SK +    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSKLV---- 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G + L +
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 441 LIEVDMSSNALRRAGARVLAQTVLHKEEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+SKL PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341


>gi|308801903|ref|XP_003078265.1| unnamed protein product [Ostreococcus tauri]
 gi|116056716|emb|CAL53005.1| unnamed protein product [Ostreococcus tauri]
          Length = 481

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 16/235 (6%)

Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC 282
           T A L  +DL+ N FG  GV   AD L       L  + L  N +G  G + L +AL   
Sbjct: 206 TSATLRRIDLAHNGFGDRGVIAFADALSRGAAPNLRVVLLGFNSIGPDGVRALMQAL--- 262

Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY----HVGI 338
              +  E   L   V  A       EG K +A +    + L+ V +  N I       G+
Sbjct: 263 -VGTNVEHLDLGCNVVGA-------EGTKAIADMINSTR-LKSVNLACNNIGLRGDRSGL 313

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            ALS A E N  L  LNL  N +    A  +   L +  +L  LN+G   L   GA  IA
Sbjct: 314 KALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETALIQLNVGYNELYDEGAWEIA 373

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           + L +N T+  ++L  NEI+ +G   + K +     +++I++  N  G +GVE++
Sbjct: 374 EALEENGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEIDLRSNMIGPDGVEKL 428



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 16/236 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           R+  L L  N     G+E L     +S    L  + L +NG G  G    + AL      
Sbjct: 181 RITRLTLRGNGICSEGMEALGKGAGTSA--TLRRIDLAHNGFGDRGVIAFADAL------ 232

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
               G+   L+V + G N +  +G + L         +E +++  N +   G  A++D  
Sbjct: 233 --SRGAAPNLRVVLLGFNSIGPDGVRALMQALVG-TNVEHLDLGCNVVGAEGTKAIADMI 289

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKL----PSLAILNLGDCLLKSAGASSIAKYL 401
              + L+ +NL  N I  +G     +ALSK      +L ILNL    L +  A  IA +L
Sbjct: 290 NSTR-LKSVNLACNNIGLRGDRSGLKALSKALETNTTLEILNLRGNALHADCAKDIADFL 348

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            + T L  +N+  NE+  +G  ++ +A++    +  +++  N+  +EG   + K +
Sbjct: 349 LEETALIQLNVGYNELYDEGAWEIAEALEENGTVVGLDLQRNEITDEGAGYIAKTL 404



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 61/117 (52%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+ ALS A E N  L  LNL  N +    A  +   L +  +L  LN+G   L   GA  
Sbjct: 312 GLKALSKALETNTTLEILNLRGNALHADCAKDIADFLLEETALIQLNVGYNELYDEGAWE 371

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           IA+ L +N T+  ++L  NEI+ +G   + K +     +++I++  N  G +GVE++
Sbjct: 372 IAEALEENGTVVGLDLQRNEITDEGAGYIAKTLSVNEVIQEIDLRSNMIGPDGVEKL 428



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 16/162 (9%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN-----LRHLNLND 358
           R+ N+GA+ +A V  +   L+R+ + +  +   G  +L++A + + +     LR L+L  
Sbjct: 101 RVSNDGARAVAEVLAQGWDLKRLALRKVNVSDDGAVSLAEAIKTSADNGTCQLRWLDLGS 160

Query: 359 NTITYKGAIPLGQALSKLPSLAILNL-----GDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           N +  +GAI +G+AL   P + I  L     G C   S G  ++ K    + TL  ++L 
Sbjct: 161 NDVRSRGAIAIGEALEH-PEVRITRLTLRGNGIC---SEGMEALGKGAGTSATLRRIDLA 216

Query: 414 CNEISVQGGLDLVKAMKN--KTKLKQINVSENQFGEEGVEEM 453
            N    +G +    A+       L+ + +  N  G +GV  +
Sbjct: 217 HNGFGDRGVIAFADALSRGAAPNLRVVLLGFNSIGPDGVRAL 258



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 38/186 (20%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEEN--KKLRHLNLNDNTITYKGAIPLGQAL------ 62
           TL  +++  NG    G+ A +DA        LR + L  N+I   G   L QAL      
Sbjct: 209 TLRRIDLAHNGFGDRGVIAFADALSRGAAPNLRVVLLGFNSIGPDGVRALMQALVGTNVE 268

Query: 63  -----------------------SKLPS--LAILNLGDCLLKS--AGASSIAKYLTDNTT 95
                                  ++L S  LA  N+G   L+   +G  +++K L  NTT
Sbjct: 269 HLDLGCNVVGAEGTKAIADMINSTRLKSVNLACNNIG---LRGDRSGLKALSKALETNTT 325

Query: 96  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           LE +NL  N +      D+   +  +T L Q+NV  N+  +EG  E+ + ++  G    L
Sbjct: 326 LEILNLRGNALHADCAKDIADFLLEETALIQLNVGYNELYDEGAWEIAEALEENGTVVGL 385

Query: 156 VLEDDE 161
            L+ +E
Sbjct: 386 DLQRNE 391



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 160/403 (39%), Gaps = 65/403 (16%)

Query: 50  ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTT--LEDVNLTCN 104
           ++  GA  + + L++   L  L L    +   GA S+A+ +    DN T  L  ++L  N
Sbjct: 102 VSNDGARAVAEVLAQGWDLKRLALRKVNVSDDGAVSLAEAIKTSADNGTCQLRWLDLGSN 161

Query: 105 EISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGE 163
           ++  +G + + +A+++ + ++ ++ +  N    EG   ME L K  G +A L   D    
Sbjct: 162 DVRSRGAIAIGEALEHPEVRITRLTLRGNGICSEG---MEALGKGAGTSATLRRIDLA-- 216

Query: 164 CSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN--NSNQSHNTSNQSHMSL 221
                           +  GD   ++  D+     A N        N       ++ M  
Sbjct: 217 ---------------HNGFGDRGVIAFADALSRGAAPNLRVVLLGFNSIGPDGVRALMQA 261

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
             G  +  LDL  N  G  G + +AD++ S+    L+ + L  N +G+ G +   KAL  
Sbjct: 262 LVGTNVEHLDLGCNVVGAEGTKAIADMINST---RLKSVNLACNNIGLRGDRSGLKALSK 318

Query: 282 CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITAL 341
             E++        L++     N L  + AK +A    +   L ++ +  N +Y  G   +
Sbjct: 319 ALETNT------TLEILNLRGNALHADCAKDIADFLLEETALIQLNVGYNELYDEGAWEI 372

Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           ++A EEN  +  L+L  N IT                              GA  IAK L
Sbjct: 373 AEALEENGTVVGLDLQRNEIT----------------------------DEGAGYIAKTL 404

Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
           + N  +++++L  N I   G   L  +    TK  +  VS  +
Sbjct: 405 SVNEVIQEIDLRSNMIGPDGVEKLASSSPRNTKRNRNRVSPRE 447



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 5/139 (3%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL----PS 67
           +EH+++  N +   G  A++D    + +L+ +NL  N I  +G     +ALSK      +
Sbjct: 267 VEHLDLGCNVVGAEGTKAIADMIN-STRLKSVNLACNNIGLRGDRSGLKALSKALETNTT 325

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L ILNL    L +  A  IA +L + T L  +N+  NE+  +G  ++ +A++    +  +
Sbjct: 326 LEILNLRGNALHADCAKDIADFLLEETALIQLNVGYNELYDEGAWEIAEALEENGTVVGL 385

Query: 128 NVSENQFGEEGVEEMEKLM 146
           ++  N+  +EG   + K +
Sbjct: 386 DLQRNEITDEGAGYIAKTL 404


>gi|399497832|emb|CCG20244.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497868|emb|CCG20262.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497878|emb|CCG20267.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497894|emb|CCG20275.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497898|emb|CCG20277.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399498120|emb|CCG20388.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399497828|emb|CCG20242.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKLLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTADEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  +L    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHXHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  +  L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHXHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 28/130 (21%)

Query: 36  ENKKLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 67
           E   L+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 128 NVSENQFGEE 137
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|320168044|gb|EFW44943.1| hypothetical protein CAOG_02949 [Capsaspora owczarzaki ATCC 30864]
          Length = 406

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 80/153 (52%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N+L+  GA+ +A   K   TL+ + +  N I   G  A+++A + N NLR L+L DN I 
Sbjct: 57  NQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGAQAIAEALKVNTNLRWLDLIDNQIG 116

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  +  AL    +L    L    +  AGA +IA+ L  N T++ + L  N+I   G 
Sbjct: 117 DAGAQAIALALKANTTLTEYTLDKNQIGDAGAQAIAEALKGNMTVQKLYLRGNQIGDIGA 176

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            ++ +A+K  T L ++++  N  G  G++ + +
Sbjct: 177 QEIAEALKMNTTLTELDLRSNCIGNAGLQAIRE 209



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 5/181 (2%)

Query: 283 YESSKKEGSPLALKVFIAGR-----NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           YES  +    L  +V  A R     + +++E AK +A   K   TL  V + +N +   G
Sbjct: 4   YESMNQSQRELYDRVKNATRWLELCDMIDDEEAKAIAEALKVNTTLTAVCLDENQLDGAG 63

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
             A+++A + N  L+ L L  N I   GA  + +AL    +L  L+L D  +  AGA +I
Sbjct: 64  AQAIAEALKVNTTLKDLYLWANWIGDAGAQAIAEALKVNTNLRWLDLIDNQIGDAGAQAI 123

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           A  L  NTTL +  L  N+I   G   + +A+K    ++++ +  NQ G+ G +E+ + +
Sbjct: 124 ALALKANTTLTEYTLDKNQIGDAGAQAIAEALKGNMTVQKLYLRGNQIGDIGAQEIAEAL 183

Query: 458 K 458
           K
Sbjct: 184 K 184



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 75/146 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  V + +N +   G  A+++A + N  L+ L L  N I   GA  + +A
Sbjct: 39  IAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGAQAIAEA 98

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L D  +  AGA +IA  L  NTTL +  L  N+I   G   + +A+K  
Sbjct: 99  LKVNTNLRWLDLIDNQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQAIAEALKGN 158

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             ++++ +  NQ G+ G +E+ + +K
Sbjct: 159 MTVQKLYLRGNQIGDIGAQEIAEALK 184



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 72/143 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL+ + +  N I   G  A+++A + N  LR L+L DN I   GA  +  A
Sbjct: 67  IAEALKVNTTLKDLYLWANWIGDAGAQAIAEALKVNTNLRWLDLIDNQIGDAGAQAIALA 126

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L    L    +  AGA +IA+ L  N T++ + L  N+I   G  ++ +A+K  
Sbjct: 127 LKANTTLTEYTLDKNQIGDAGAQAIAEALKGNMTVQKLYLRGNQIGDIGAQEIAEALKMN 186

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
           T L ++++  N  G  G++ + +
Sbjct: 187 TTLTELDLRSNCIGNAGLQAIRE 209



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 12/139 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  LDL DN  G  G + +A  L+++    L E  L+ N +G  G + +++AL
Sbjct: 98  ALKVNTNLRWLDLIDNQIGDAGAQAIALALKANTT--LTEYTLDKNQIGDAGAQAIAEAL 155

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                    +G+    K+++ G N++ + GA+ +A   K   TL  +++  N I + G+ 
Sbjct: 156 ---------KGNMTVQKLYLRG-NQIGDIGAQEIAEALKMNTTLTELDLRSNCIGNAGLQ 205

Query: 340 ALSDAFEENKNLRHLNLND 358
           A+ +A + N+ L  L ++D
Sbjct: 206 AIREASQVNRTLTRLKIDD 224



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 62/119 (52%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + N  L  + L++N +   GA  + +AL    +L  L L    +  AGA +IA+
Sbjct: 38  AIAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGAQAIAE 97

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            L  NT L  ++L  N+I   G   +  A+K  T L +  + +NQ G+ G + + + +K
Sbjct: 98  ALKVNTNLRWLDLIDNQIGDAGAQAIALALKANTTLTEYTLDKNQIGDAGAQAIAEALK 156



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 51/91 (56%)

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +AL    +L  + L +  L  AGA +IA+ L  NTTL+D+ L  N I   G   + +A
Sbjct: 39  IAEALKVNTTLTAVCLDENQLDGAGAQAIAEALKVNTTLKDLYLWANWIGDAGAQAIAEA 98

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +K  T L+ +++ +NQ G+ G + +   +K+
Sbjct: 99  LKVNTNLRWLDLIDNQIGDAGAQAIALALKA 129


>gi|399497884|emb|CCG20270.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|255559446|ref|XP_002520743.1| leucine rich repeat-containing protein, putative [Ricinus communis]
 gi|223540128|gb|EEF41705.1| leucine rich repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 13/227 (5%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G  L  L+LS+NA G  GV     LL+S     LEEL L N+G+        ++A+ +  
Sbjct: 214 GCNLRCLNLSNNALGEKGVRAFGALLKSQN--NLEELYLINDGISEEA----ARAVCELV 267

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A   K+   LE        I   G  AL++
Sbjct: 268 PSTEK------LKVLQFHNNMTGDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAE 321

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A     +LR L+L DN    +  + L +AL     L  + L    L+  GA ++A  L +
Sbjct: 322 ALGTCTHLRKLDLRDNMFGVEAGVALSKALFSFADLTEVYLSYLNLEDEGAEALADALKE 381

Query: 404 NT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +  +LE +++  N+ + +    L   +  K  L ++N++EN+  +EG
Sbjct: 382 SAPSLEVLDMAGNDFTAKAASSLAPCIAAKQFLSKLNLAENELKDEG 428



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 24/243 (9%)

Query: 230 LDLSDNAFGPIGVEGLADLLR---------SSCCFALEELKLNNNGLGITGCKLLSKALH 280
            D+S      I  E   DLLR         +  CF+       N   G+    +  + L 
Sbjct: 126 FDISAGRRAFISAEEAQDLLRPLKELGNRYTKICFS-------NRSFGLDAAAVAEQILL 178

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK--TLERVEMPQNGIYHVGI 338
               S K + + + L  F+AGR   E E  +++      L+   L  + +  N +   G+
Sbjct: 179 ----SVKDQLTEVDLSDFVAGRP--EPEALEVMNIFSTALEGCNLRCLNLSNNALGEKGV 232

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            A     +   NL  L L ++ I+ + A  + + +     L +L   + +    GA +IA
Sbjct: 233 RAFGALLKSQNNLEELYLINDGISEEAARAVCELVPSTEKLKVLQFHNNMTGDEGAVAIA 292

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +++  +  LED   +   I + GG+ L +A+   T L+++++ +N FG E    + K + 
Sbjct: 293 EFVKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLRKLDLRDNMFGVEAGVALSKALF 352

Query: 459 SFG 461
           SF 
Sbjct: 353 SFA 355



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 3/140 (2%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  AL+DA +E+   L  L++  N  T K A  L   ++    L+ LNL +  LK  GA 
Sbjct: 371 GAEALADALKESAPSLEVLDMAGNDFTAKAASSLAPCIAAKQFLSKLNLAENELKDEGAI 430

Query: 85  SIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            IAK +   +  L +V+L  N+I   G   L +A+  K   K +N++ N   +EG++E++
Sbjct: 431 LIAKAIEGGHGQLNEVDLGTNQIRRAGARLLAQAVVLKPGFKLLNINGNFISDEGIDEVK 490

Query: 144 KLMKSF-GMAAALVLEDDEG 162
            + K+  G+   L   D EG
Sbjct: 491 DIFKNLPGVLGPLDENDPEG 510



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 65/139 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 217 LRCLNLSNNALGEKGVRAFGALLKSQNNLEELYLINDGISEEAARAVCELVPSTEKLKVL 276

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
              + +    GA +IA+++  +  LED   +   I + GG+ L +A+   T L+++++ +
Sbjct: 277 QFHNNMTGDEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLRKLDLRD 336

Query: 132 NQFGEEGVEEMEKLMKSFG 150
           N FG E    + K + SF 
Sbjct: 337 NMFGVEAGVALSKALFSFA 355



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 68/156 (43%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N L  +G +   A+ K    LE + +  +GI      A+ +     + L+ L  ++N   
Sbjct: 225 NALGEKGVRAFGALLKSQNNLEELYLINDGISEEAARAVCELVPSTEKLKVLQFHNNMTG 284

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA+ + + + +   L         +   G  ++A+ L   T L  ++L  N   V+ G
Sbjct: 285 DEGAVAIAEFVKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLRKLDLRDNMFGVEAG 344

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L KA+ +   L ++ +S     +EG E +   +K
Sbjct: 345 VALSKALFSFADLTEVYLSYLNLEDEGAEALADALK 380



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 64/146 (43%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
             A+ K    LE + +  +GI      A+ +     +KL+ L  ++N    +GA+ + + 
Sbjct: 235 FGALLKSQNNLEELYLINDGISEEAARAVCELVPSTEKLKVLQFHNNMTGDEGAVAIAEF 294

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           + +   L         +   G  ++A+ L   T L  ++L  N   V+ G+ L KA+ + 
Sbjct: 295 VKRSAMLEDFRCSSTRIGLDGGVALAEALGTCTHLRKLDLRDNMFGVEAGVALSKALFSF 354

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L ++ +S     +EG E +   +K
Sbjct: 355 ADLTEVYLSYLNLEDEGAEALADALK 380


>gi|399498082|emb|CCG20369.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399497844|emb|CCG20250.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399498068|emb|CCG20362.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|326434568|gb|EGD80138.1| hypothetical protein PTSG_13103 [Salpingoeca sp. ATCC 50818]
          Length = 1445

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 10/161 (6%)

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
           + + LNN+GLG+ G + ++KAL D             LK      N + +EGA +LA + 
Sbjct: 39  DNVGLNNDGLGVIGARAVAKALKD----------NTCLKTLFLQSNSIGDEGAVVLAEML 88

Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
           K    LE++ + +N I   G  AL +  + N  L  L L  N +  +GA+ L + L    
Sbjct: 89  KHNTALEQLFLSENSIGPEGAVALVEMLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNT 148

Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           +L IL L +  +   G +++   L +N TL  +++  N  +
Sbjct: 149 TLEILILDNNSITPVGGAALGAALDENRTLSRLDIEENSTA 189



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 29/242 (11%)

Query: 4   AVFKKLK---TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           AV K LK    L+ + +  N I   G   L++  + N  L  L L++N+I  +GA+ L +
Sbjct: 55  AVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTALEQLFLSENSIGPEGAVALVE 114

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L    +L  L L    +   GA ++AK L  NTTLE + L  N I+  GG  L  A+  
Sbjct: 115 MLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEILILDNNSITPVGGAALGAALDE 174

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE-------DDEGECSDEEQDEES 173
              L ++++ EN              ++FG A  +  E       D EG  + +E  +E 
Sbjct: 175 NRTLSRLDIEENSTATA---------RAFGAALPVDRELNTDWGDDREGNAAFDEARKEK 225

Query: 174 EEEN---------DSDAEGDNSNLSHNDSN-HSHNASNQSHNNSNQSHNTSNQSHMSLKT 223
           +  +         D DA    S +  ++++ + HN    +  +    HN      + LK 
Sbjct: 226 KRRHHEQLFAACRDGDAPAVTSLIEQDNADVNQHNEQGDTPLHVACRHNQPAVVELLLKK 285

Query: 224 GA 225
           GA
Sbjct: 286 GA 287



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 16/159 (10%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L L  N+ G  G   LA++L+ +   ALE+L L+ N +G  G   L + L
Sbjct: 59  ALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNT--ALEQLFLSENSIGPEGAVALVEML 116

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      + L L+     RNR+ +EGA  LA V K   TLE + +  N I  VG  
Sbjct: 117 -----KHNTTLTWLGLE-----RNRVGDEGAVALAKVLKHNTTLEILILDNNSITPVGGA 166

Query: 340 ALSDAFEENKNLRHLNLNDNTI----TYKGAIPLGQALS 374
           AL  A +EN+ L  L++ +N+      +  A+P+ + L+
Sbjct: 167 ALGAALDENRTLSRLDIEENSTATARAFGAALPVDRELN 205



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 62/119 (52%)

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
           ++ LN++ +   GA  + +AL     L  L L    +   GA  +A+ L  NT LE + L
Sbjct: 40  NVGLNNDGLGVIGARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTALEQLFL 99

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
           + N I  +G + LV+ +K+ T L  + +  N+ G+EG   + K++K       L+L+++
Sbjct: 100 SENSIGPEGAVALVEMLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEILILDNN 158



 Score = 51.6 bits (122), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 64/126 (50%)

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
           + V +  +G+  +G  A++ A ++N  L+ L L  N+I  +GA+ L + L    +L  L 
Sbjct: 39  DNVGLNNDGLGVIGARAVAKALKDNTCLKTLFLQSNSIGDEGAVVLAEMLKHNTALEQLF 98

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           L +  +   GA ++ + L  NTTL  + L  N +  +G + L K +K+ T L+ + +  N
Sbjct: 99  LSENSIGPEGAVALVEMLKHNTTLTWLGLERNRVGDEGAVALAKVLKHNTTLEILILDNN 158

Query: 444 QFGEEG 449
                G
Sbjct: 159 SITPVG 164


>gi|399497924|emb|CCG20290.1| Ran GTPase activating protein 2 [Solanum berthaultii]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 34/142 (23%)

Query: 40  LRHLNLNDNTITY-----KGAIPLGQALS-KLPSLAIL---------------------- 71
           ++H NL +  ++Y     +GAI +  AL    PSLA+L                      
Sbjct: 351 IKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAK 410

Query: 72  ------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
                 +LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K
Sbjct: 411 QLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFK 470

Query: 126 QINVSENQFGEEGVEEMEKLMK 147
            +NV+ N   EEGV+E++++ K
Sbjct: 471 LLNVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497834|emb|CCG20245.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKLLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTADEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  +L    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  +  L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHIHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 38.5 bits (88), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 28/130 (21%)

Query: 36  ENKKLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 67
           E   L+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKLLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEK 271

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTADEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 128 NVSENQFGEE 137
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497856|emb|CCG20256.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497864|emb|CCG20260.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|403264743|ref|XP_003924632.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 471

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 119/244 (48%), Gaps = 23/244 (9%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   + +L+L DN     G+  L ++L+ +  + L+EL ++NN LG+ G +++S  
Sbjct: 110 IALVSNTTVSKLELEDNGITEEGILSLVEMLQEN--YYLQELNISNNQLGLEGARIISDF 167

Query: 279 LHDCYES----------SKKEGSPLALKVFIA---------GRNRLENEGAKMLAAVFKK 319
           L     S           K+E + L  +V  +           N+  + G + L  +   
Sbjct: 168 LETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLAT 227

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L     L
Sbjct: 228 NVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGALALGEVLRLNSCL 287

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
             L++    + + GAS I+K L  N +L+ + L  N ISV G L L+ ++K   K+++++
Sbjct: 288 VYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDGALLLILSIKRNPKSRMEE 347

Query: 438 INVS 441
           +++S
Sbjct: 348 LDIS 351



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 134/326 (41%), Gaps = 63/326 (19%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NTT+  + L  N I+ +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILS 135

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++N+S NQ G EG   +   +++   ++   L     E S  +  EES
Sbjct: 136 LVEMLQENYYLQELNISNNQLGLEGARIISDFLET-NTSSIWSL-----ELSGNDFKEES 189

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELD 231
                  A      LS   SN+     + SH   NQ  +   + H+   L T   L  LD
Sbjct: 190 -------AALLCQVLS---SNYRIKKLDLSH---NQFSDVGGE-HLGQMLATNVGLTSLD 235

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
           LS N F   G   L + LR +    L +L L+ NGLG                       
Sbjct: 236 LSWNHFHTRGAVALCNGLRGNV--TLTKLDLSMNGLG----------------------- 270

Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
                          NEGA  L  V +    L  +++  N I + G + +S   E N++L
Sbjct: 271 ---------------NEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESL 315

Query: 352 RHLNLNDNTITYKGAIPLGQALSKLP 377
           + L L  N I+  GA+ L  ++ + P
Sbjct: 316 KVLKLFLNPISVDGALLLILSIKRNP 341



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 13/231 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++L+ +  GP G + +A  L S+   +  +L+L +NG+   G   L + L + Y      
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNTTVS--KLELEDNGITEEGILSLVEMLQENY------ 144

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEEN 348
                L+      N+L  EGA++++   +    ++  +E+  N         L      N
Sbjct: 145 ----YLQELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSN 200

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             ++ L+L+ N  +  G   LGQ L+    L  L+L      + GA ++   L  N TL 
Sbjct: 201 YRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLT 260

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            ++L+ N +  +G L L + ++  + L  ++VS N    EG  ++ K ++S
Sbjct: 261 KLDLSMNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLES 311



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L     L  L
Sbjct: 231 LTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGALALGEVLRLNSCLVYL 290

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++    + + GAS I+K L  N +L+ + L  N ISV G L L+ ++K   K++++++++
Sbjct: 291 DVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDGALLLILSIKRNPKSRMEELDI 350

Query: 130 S 130
           S
Sbjct: 351 S 351



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 126/309 (40%), Gaps = 64/309 (20%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           +V +  +G+   G  A++ A   N  +  L L DN IT +G + L + L +   L  LN+
Sbjct: 92  YVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELNI 151

Query: 74  GDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
            +  L   GA  I+ +L  NT ++  + L+ N+   +    L + + +  ++K++++S N
Sbjct: 152 SNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHN 211

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
           QF + G E + +++ +                                    N  L+  D
Sbjct: 212 QFSDVGGEHLGQMLAT------------------------------------NVGLTSLD 235

Query: 193 --SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
              NH H     +  N              L+    L +LDLS N  G  G   L ++LR
Sbjct: 236 LSWNHFHTRGAVALCN-------------GLRGNVTLTKLDLSMNGLGNEGALALGEVLR 282

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            + C     L ++ N +   G   +SK L +  ES K       LK+F+   N +  +GA
Sbjct: 283 LNSCLVY--LDVSGNDISNEGASKISKGL-ESNESLK------VLKLFL---NPISVDGA 330

Query: 311 KMLAAVFKK 319
            +L    K+
Sbjct: 331 LLLILSIKR 339



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLA 69
           T+  +E+  NGI   GI +L +  +EN  L+ LN+++N +  +GA  +   L +   S+ 
Sbjct: 117 TVSKLELEDNGITEEGILSLVEMLQENYYLQELNISNNQLGLEGARIISDFLETNTSSIW 176

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L     K   A+ + + L+ N  ++ ++L+ N+ S  GG  L + +     L  +++
Sbjct: 177 SLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDL 236

Query: 130 SENQFGEEG 138
           S N F   G
Sbjct: 237 SWNHFHTRG 245


>gi|402858419|ref|XP_003893704.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform
           3 [Papio anubis]
          Length = 978

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 16/265 (6%)

Query: 196 SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 255
           SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L+   C 
Sbjct: 711 SHAACSHRLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPDC- 769

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            +  L L   GL    C  +S  L     SS ++   L L       N L + G ++L  
Sbjct: 770 NIRRLWLGRCGLSHECCFDISLVL-----SSNQKLVELDL-----SDNALGDFGIRLLCV 819

Query: 316 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
             K L   L+++ +  +G+  V  +ALS     N+NL HL L  NT+  KG   L + L 
Sbjct: 820 GLKHLLCNLKKLWLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLL 879

Query: 375 KLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
             P   L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K +
Sbjct: 880 H-PDCKLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQ 938

Query: 433 TKLKQ-INVSENQFGEEGVEEMEKL 456
           + L Q + +SE  F  E    +E L
Sbjct: 939 SCLLQNLGLSEMYFNYETKSALETL 963



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-- 66
           L  L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P  
Sbjct: 825 LCNLKKLWLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDC 883

Query: 67  SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
            L +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q
Sbjct: 884 KLQVLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQ 943

Query: 127 -INVSENQFGEEGVEEMEKL 145
            + +SE  F  E    +E L
Sbjct: 944 NLGLSEMYFNYETKSALETL 963


>gi|340053885|emb|CCC48179.1| conserved hypothetical protein [Trypanosoma vivax Y486]
          Length = 433

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 15/213 (7%)

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           ++C   L  + L+ N +G  G K L +++         + +PL     +A  N + +EG 
Sbjct: 149 AACHRDLSRVDLSWNKIGPLGTKCLLRSM---------QRNPLCTYNLVA--NMIGDEGT 197

Query: 311 KMLAAVFKKL--KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           + L    ++   KTL  + + +N + + G  A+    E N+ +  L L+ NTI  +G   
Sbjct: 198 EHLCEALQRYGNKTLTTLNLYRNDVSYRGCKAVGRLIENNEFILDLGLHSNTIGLRGMQE 257

Query: 369 LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLV 426
           L   L+  P+ L  +NL +C+L   GA  +A  +  D  TLE +++  N I+  GG+ +V
Sbjct: 258 LRHHLTSAPNRLRSINLNNCMLGDDGAQEVATIIEADLPTLERLSIADNNITDVGGMAIV 317

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           K++     L  ++ + N+FG + VE   +L++S
Sbjct: 318 KSLMVNNFLISVSCTGNRFGAKTVELTLQLLES 350



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 2/141 (1%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-L 68
           KTL  + + +N + + G  A+    E N+ +  L L+ NTI  +G   L   L+  P+ L
Sbjct: 210 KTLTTLNLYRNDVSYRGCKAVGRLIENNEFILDLGLHSNTIGLRGMQELRHHLTSAPNRL 269

Query: 69  AILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
             +NL +C+L   GA  +A  +  D  TLE +++  N I+  GG+ +VK++     L  +
Sbjct: 270 RSINLNNCMLGDDGAQEVATIIEADLPTLERLSIADNNITDVGGMAIVKSLMVNNFLISV 329

Query: 128 NVSENQFGEEGVEEMEKLMKS 148
           + + N+FG + VE   +L++S
Sbjct: 330 SCTGNRFGAKTVELTLQLLES 350



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 16/167 (9%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
            G +++     K K + R+++  N I   G  A+++    N+ + HLNL  N IT  G I
Sbjct: 45  RGMQIIGNALAKNKHVVRLDISHNKIGDAGAVAVAELLRRNETILHLNLAQNGITDVGGI 104

Query: 368 PLGQALSKLP-------------SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            L  A   +P             +L  L L    L  A   +++K    +  L  V+L+ 
Sbjct: 105 ALASAF--IPNVSPNGQPGQWNRTLFTLVLAGNELGDATLLALSKAAACHRDLSRVDLSW 162

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 461
           N+I   G   L+++M+ +  L   N+  N  G+EG E + + ++ +G
Sbjct: 163 NKIGPLGTKCLLRSMQ-RNPLCTYNLVANMIGDEGTEHLCEALQRYG 208


>gi|399497912|emb|CCG20284.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399497922|emb|CCG20289.1| Ran GTPase activating protein 2 [Solanum berthaultii]
 gi|399497926|emb|CCG20291.1| Ran GTPase activating protein 2 [Solanum berthaultii]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399498050|emb|CCG20353.1| Ran GTPase activating protein 2 [Solanum tarijense]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAFAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PS+A+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497882|emb|CCG20269.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKVLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKVLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKVLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399497848|emb|CCG20252.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMYSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|326432350|gb|EGD77920.1| hypothetical protein PTSG_12898 [Salpingoeca sp. ATCC 50818]
          Length = 1415

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 21/246 (8%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L T   L EL L DN  G  G   +A++L S+   +LE L+LNNN +G +G + +  +L 
Sbjct: 528 LNTNTHLRELRLHDNRIGDFGATAIAEMLASNK--SLEILELNNNQIGDSGGRAICASL- 584

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                        AL+      NRL  +  + L    K+ + L ++ +  N +   G  A
Sbjct: 585 ---------AGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRLGPQGGRA 635

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           + +    N  L  L L+DN I  +    +G AL    SLA L+L +  L      +I + 
Sbjct: 636 VGEGLVTNLALHKLILDDNLIGDEAGQAIGNALKHNMSLAKLHLKNNRLGELAGYAIGEA 695

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
           L  NT L +++L  N +   GG  L + ++  T +  + +  + FG  G+E         
Sbjct: 696 LLRNTILRELHLDNNRLGDVGGHALGEGLQRNTSIHILGLHNSGFGARGLE--------- 746

Query: 461 GMAAAL 466
           G+AA L
Sbjct: 747 GLAAGL 752



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 25/285 (8%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V++  N I  +G TAL+D    N  LR L L+DN I   GA  + + L+   SL IL L 
Sbjct: 509 VDLCNNRISDMGATALADMLNTNTHLRELRLHDNRIGDFGATAIAEMLASNKSLEILELN 568

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           +  +  +G  +I   L  NT L +++L  N +    G  L  A+K    L+++N+  N+ 
Sbjct: 569 NNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRL 628

Query: 135 GEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDS 193
           G +G   + E L+ +  +   L+L+D+                 D   +   + L HN S
Sbjct: 629 GPQGGRAVGEGLVTNLAL-HKLILDDN--------------LIGDEAGQAIGNALKHNMS 673

Query: 194 NHSHNASNQSHNNSNQSHNTSNQS-HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
                   + H  +N+    +  +   +L     L EL L +N  G +G   L + L+ +
Sbjct: 674 ------LAKLHLKNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVGGHALGEGLQRN 727

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
              ++  L L+N+G G  G + L+  L D +   +     L  +V
Sbjct: 728 T--SIHILGLHNSGFGARGLEGLAAGLEDVFSQRRTIAKLLPPRV 770



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 65/124 (52%)

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           V++  N I  +G TAL+D    N +LR L L+DN I   GA  + + L+   SL IL L 
Sbjct: 509 VDLCNNRISDMGATALADMLNTNTHLRELRLHDNRIGDFGATAIAEMLASNKSLEILELN 568

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           +  +  +G  +I   L  NT L +++L  N +    G  L  A+K    L+++N+  N+ 
Sbjct: 569 NNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRL 628

Query: 446 GEEG 449
           G +G
Sbjct: 629 GPQG 632



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           M L  G     +DL +N    +G   LAD+L ++    L EL+L++N +G  G   +++ 
Sbjct: 498 MELWKGTNPTLVDLCNNRISDMGATALADMLNTNT--HLRELRLHDNRIGDFGATAIAEM 555

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L     +S K     +L++     N++ + G + + A       L  +++  N +     
Sbjct: 556 L-----ASNK-----SLEILELNNNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAG 605

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            AL  A +EN+ LR LNL  N +  +G   +G+ L    +L  L L D L+      +I 
Sbjct: 606 RALGTALKENRALRKLNLKGNRLGPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIG 665

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             L  N +L  ++L  N +    G  + +A+   T L+++++  N+ G+ G
Sbjct: 666 NALKHNMSLAKLHLKNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVG 716



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           NR+ + GA  LA +      L  + +  N I   G TA+++    NK+L  L LN+N I 
Sbjct: 514 NRISDMGATALADMLNTNTHLRELRLHDNRIGDFGATAIAEMLASNKSLEILELNNNQIG 573

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G   +  +L+   +L  L+L    L+     ++   L +N  L  +NL  N +  QGG
Sbjct: 574 DSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALRKLNLKGNRLGPQGG 633

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + + +     L ++ + +N  G+E  + +   +K
Sbjct: 634 RAVGEGLVTNLALHKLILDDNLIGDEAGQAIGNALK 669



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 62/136 (45%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  N I   G TA+++    NK L  L LN+N I   G   +  +L+   +L  L
Sbjct: 534 LRELRLHDNRIGDFGATAIAEMLASNKSLEILELNNNQIGDSGGRAICASLAGNTALREL 593

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    L+     ++   L +N  L  +NL  N +  QGG  + + +     L ++ + +
Sbjct: 594 DLRGNRLRGDAGRALGTALKENRALRKLNLKGNRLGPQGGRAVGEGLVTNLALHKLILDD 653

Query: 132 NQFGEEGVEEMEKLMK 147
           N  G+E  + +   +K
Sbjct: 654 NLIGDEAGQAIGNALK 669



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 59/127 (46%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           K+LE +E+  N I   G  A+  +   N  LR L+L  N +       LG AL +  +L 
Sbjct: 560 KSLEILELNNNQIGDSGGRAICASLAGNTALRELDLRGNRLRGDAGRALGTALKENRALR 619

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            LNL    L   G  ++ + L  N  L  + L  N I  + G  +  A+K+   L ++++
Sbjct: 620 KLNLKGNRLGPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIGNALKHNMSLAKLHL 679

Query: 130 SENQFGE 136
             N+ GE
Sbjct: 680 KNNRLGE 686



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L    K+ + L  + +  N +   G  A+ +    N  L  L L+DN I  +    +G A
Sbjct: 608 LGTALKENRALRKLNLKGNRLGPQGGRAVGEGLVTNLALHKLILDDNLIGDEAGQAIGNA 667

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SLA L+L +  L      +I + L  NT L +++L  N +   GG  L + ++  
Sbjct: 668 LKHNMSLAKLHLKNNRLGELAGYAIGEALLRNTILRELHLDNNRLGDVGGHALGEGLQRN 727

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           T +  + +  + FG  G+E         G+AA L
Sbjct: 728 TSIHILGLHNSGFGARGLE---------GLAAGL 752


>gi|399498042|emb|CCG20349.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +G I +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K   K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDAFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 11/198 (5%)

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           S  CF+       N   G+   ++    L    +  K+    + L  F+AGRN  E    
Sbjct: 155 SKICFS-------NRSFGVDAARIAGPILAALKDQLKE----VDLSDFVAGRNEAEALDV 203

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
             + +V  +   L+ + +  N +   G+ A     +   NL  L L ++ I+ + A  + 
Sbjct: 204 MNIFSVALEGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVC 263

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
           + +     L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+ 
Sbjct: 264 ELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALG 323

Query: 431 NKTKLKQINVSENQFGEE 448
             + LK++++ +N FG E
Sbjct: 324 MCSHLKKLDLRDNMFGPE 341



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G+ A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K   K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDAFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341


>gi|399497872|emb|CCG20264.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497890|emb|CCG20273.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|320170893|gb|EFW47792.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 401

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 81/152 (53%)

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           + GA  +A   K   T+  + + QN I  VG  AL++  + N+ +  L++  N I   GA
Sbjct: 34  DAGAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWRNQIGDAGA 93

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + +AL    ++ +++LG   +   GAS+IA+ L  N T+  ++L  N+I   G   L 
Sbjct: 94  SAIAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIGSAGAQALA 153

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +A K  T + Q+++ EN  G+ G + + +L+K
Sbjct: 154 EAFKVNTTVTQVDLGENLIGDAGAQAIAELIK 185



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  + + QN I  VG  AL++  + N+ +  L++  N I   GA  + +A
Sbjct: 40  IAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWRNQIGDAGASAIAEA 99

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++ +++LG   +   GAS+IA+ L  N T+  ++L  N+I   G   L +A K  
Sbjct: 100 LKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIGSAGAQALAEAFKVN 159

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T + Q+++ EN  G+ G + + +L+K
Sbjct: 160 TTVTQVDLGENLIGDAGAQAIAELIK 185



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 83/152 (54%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++   GA+ LA   K  +T+ ++++ +N I   G +A+++A + N  +  ++L  N I
Sbjct: 57  QNQIGEVGARALAETLKVNETVTKLDIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQI 116

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
           +  GA  + +AL    ++  L+L +  + SAGA ++A+    NTT+  V+L  N I   G
Sbjct: 117 SDIGASAIAEALKVNKTVTKLDLDENQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAG 176

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
              + + +K    L  +N+S N  G+ G++ +
Sbjct: 177 AQAIAELIKVNKTLAWLNLSWNCIGDVGIQAI 208



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A+++A + N  +  L L  N I   GA  L + L    ++  L++    +  AGAS+
Sbjct: 36  GAPAIAEALKVNTTMTWLALWQNQIGEVGARALAETLKVNETVTKLDIWRNQIGDAGASA 95

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA+ L  NTT+  V+L  N+IS  G   + +A+K    + ++++ ENQ G  G + + + 
Sbjct: 96  IAEALKVNTTVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIGSAGAQALAEA 155

Query: 146 MK 147
            K
Sbjct: 156 FK 157



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 75/141 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +T+  +++ +N I   G +A+++A + N  +  ++L  N I+  GA  + +A
Sbjct: 68  LAETLKVNETVTKLDIWRNQIGDAGASAIAEALKVNTTVNMVDLGGNQISDIGASAIAEA 127

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L+L +  + SAGA ++A+    NTT+  V+L  N I   G   + + +K  
Sbjct: 128 LKVNKTVTKLDLDENQIGSAGAQALAEAFKVNTTVTQVDLGENLIGDAGAQAIAELIKVN 187

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             L  +N+S N  G+ G++ +
Sbjct: 188 KTLAWLNLSWNCIGDVGIQAI 208



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 12/179 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    +  L L  N  G +G   LA+ L+ +    + +L +  N +G  G   +++AL
Sbjct: 43  ALKVNTTMTWLALWQNQIGEVGARALAETLKVNET--VTKLDIWRNQIGDAGASAIAEAL 100

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  +   + +   G N++ + GA  +A   K  KT+ ++++ +N I   G  
Sbjct: 101 --------KVNT--TVNMVDLGGNQISDIGASAIAEALKVNKTVTKLDLDENQIGSAGAQ 150

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
           AL++AF+ N  +  ++L +N I   GA  + + +    +LA LNL    +   G  +IA
Sbjct: 151 ALAEAFKVNTTVTQVDLGENLIGDAGAQAIAELIKVNKTLAWLNLSWNCIGDVGIQAIA 209


>gi|399497992|emb|CCG20324.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497936|emb|CCG20296.1| Ran GTPase activating protein 2 [Solanum stenophyllidium]
          Length = 553

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G  L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GCNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITADAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNLISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGCNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|403264745|ref|XP_003924633.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 384

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 119/244 (48%), Gaps = 23/244 (9%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   + +L+L DN     G+  L ++L+ +  + L+EL ++NN LG+ G +++S  
Sbjct: 23  IALVSNTTVSKLELEDNGITEEGILSLVEMLQEN--YYLQELNISNNQLGLEGARIISDF 80

Query: 279 LHDCYES----------SKKEGSPLALKVFIA---------GRNRLENEGAKMLAAVFKK 319
           L     S           K+E + L  +V  +           N+  + G + L  +   
Sbjct: 81  LETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLAT 140

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L     L
Sbjct: 141 NVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGALALGEVLRLNSCL 200

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
             L++    + + GAS I+K L  N +L+ + L  N ISV G L L+ ++K   K+++++
Sbjct: 201 VYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDGALLLILSIKRNPKSRMEE 260

Query: 438 INVS 441
           +++S
Sbjct: 261 LDIS 264



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 123/311 (39%), Gaps = 62/311 (19%)

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
           + +NL    L   G  +IA  L  NTT+  + L  N I+ +G L LV+ ++    L+++N
Sbjct: 4   SYVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELN 63

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           +S NQ G EG     +++  F       LE +       E        ND   E      
Sbjct: 64  ISNNQLGLEGA----RIISDF-------LETNTSSIWSLELS-----GNDFKEESAALLC 107

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDNAFGPIGVEGLA 246
               SN+     + SH   NQ  +   + H+   L T   L  LDLS N F   G   L 
Sbjct: 108 QVLSSNYRIKKLDLSH---NQFSDVGGE-HLGQMLATNVGLTSLDLSWNHFHTRGAVALC 163

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
           + LR +    L +L L+ NGLG                                      
Sbjct: 164 NGLRGNV--TLTKLDLSMNGLG-------------------------------------- 183

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           NEGA  L  V +    L  +++  N I + G + +S   E N++L+ L L  N I+  GA
Sbjct: 184 NEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDGA 243

Query: 367 IPLGQALSKLP 377
           + L  ++ + P
Sbjct: 244 LLLILSIKRNP 254



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 13/231 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++L+ +  GP G + +A  L S+   +  +L+L +NG+   G   L + L + Y      
Sbjct: 6   VNLNHHGLGPRGTKAIAIALVSNTTVS--KLELEDNGITEEGILSLVEMLQENY------ 57

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEEN 348
                L+      N+L  EGA++++   +    ++  +E+  N         L      N
Sbjct: 58  ----YLQELNISNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSN 113

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             ++ L+L+ N  +  G   LGQ L+    L  L+L      + GA ++   L  N TL 
Sbjct: 114 YRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDLSWNHFHTRGAVALCNGLRGNVTLT 173

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            ++L+ N +  +G L L + ++  + L  ++VS N    EG  ++ K ++S
Sbjct: 174 KLDLSMNGLGNEGALALGEVLRLNSCLVYLDVSGNDISNEGASKISKGLES 224



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L     L  L
Sbjct: 144 LTSLDLSWNHFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGALALGEVLRLNSCLVYL 203

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++    + + GAS I+K L  N +L+ + L  N ISV G L L+ ++K   K++++++++
Sbjct: 204 DVSGNDISNEGASKISKGLESNESLKVLKLFLNPISVDGALLLILSIKRNPKSRMEELDI 263

Query: 130 S 130
           S
Sbjct: 264 S 264



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 127/309 (41%), Gaps = 64/309 (20%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           +V +  +G+   G  A++ A   N  +  L L DN IT +G + L + L +   L  LN+
Sbjct: 5   YVNLNHHGLGPRGTKAIAIALVSNTTVSKLELEDNGITEEGILSLVEMLQENYYLQELNI 64

Query: 74  GDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
            +  L   GA  I+ +L  NT ++  + L+ N+   +    L + + +  ++K++++S N
Sbjct: 65  SNNQLGLEGARIISDFLETNTSSIWSLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHN 124

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
           QF + G E + +++ +                                    N  L+  D
Sbjct: 125 QFSDVGGEHLGQMLAT------------------------------------NVGLTSLD 148

Query: 193 --SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
              NH H     +  N              L+    L +LDLS N  G  G   L ++LR
Sbjct: 149 LSWNHFHTRGAVALCN-------------GLRGNVTLTKLDLSMNGLGNEGALALGEVLR 195

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
            + C  L  L ++ N +   G   +SK L +  ES K       LK+F+   N +  +GA
Sbjct: 196 LNSC--LVYLDVSGNDISNEGASKISKGL-ESNESLK------VLKLFL---NPISVDGA 243

Query: 311 KMLAAVFKK 319
            +L    K+
Sbjct: 244 LLLILSIKR 252



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLA 69
           T+  +E+  NGI   GI +L +  +EN  L+ LN+++N +  +GA  +   L +   S+ 
Sbjct: 30  TVSKLELEDNGITEEGILSLVEMLQENYYLQELNISNNQLGLEGARIISDFLETNTSSIW 89

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L     K   A+ + + L+ N  ++ ++L+ N+ S  GG  L + +     L  +++
Sbjct: 90  SLELSGNDFKEESAALLCQVLSSNYRIKKLDLSHNQFSDVGGEHLGQMLATNVGLTSLDL 149

Query: 130 SENQFGEEG 138
           S N F   G
Sbjct: 150 SWNHFHTRG 158


>gi|308801333|ref|XP_003077980.1| unnamed protein product [Ostreococcus tauri]
 gi|116056431|emb|CAL52720.1| unnamed protein product [Ostreococcus tauri]
          Length = 517

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 20/215 (9%)

Query: 254 CFALEELKLNN---------NGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNR 304
           CF  E    NN         NG+G+ G   L +AL  C ++         L +     N 
Sbjct: 99  CFIAEAFAYNNVASCVDMSANGIGLDGTTALCEALK-CNDT---------LTMLSLASNP 148

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           + ++GAK+LA   K  K +  + +    I   G  A+++A + N  +  L +N+N + Y+
Sbjct: 149 IGDDGAKVLAEYLKVDKKITTLNLNACSIGDEGAKAIAEALKMNTTIISLEMNNNMVDYE 208

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G+  + QAL++  +L +L L    + + GASS    L +NT L  + L  N+I  +G + 
Sbjct: 209 GSGAMAQALAQNTTLELLALNGNYVGALGASSFGAALKENTGLRSLQLNGNDIGNEGCIK 268

Query: 425 LVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMK 458
           L + +  ++ K+  +++  N  G      +   +K
Sbjct: 269 LCEGLAARSEKINNLDLGNNSIGPAAGPALRDYLK 303



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 167/384 (43%), Gaps = 23/384 (5%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +A  F        V+M  NGI   G TAL +A + N  L  L+L  N I   GA  L +
Sbjct: 100 FIAEAFAYNNVASCVDMSANGIGLDGTTALCEALKCNDTLTMLSLASNPIGDDGAKVLAE 159

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            L     +  LNL  C +   GA +IA+ L  NTT+  + +  N +  +G   + +A+  
Sbjct: 160 YLKVDKKITTLNLNACSIGDEGAKAIAEALKMNTTIISLEMNNNMVDYEGSGAMAQALAQ 219

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK-SFGMAAALVLEDDEGE--CSD--EEQDEESEE 175
            T L+ + ++ N  G  G       +K + G+ +  +  +D G   C    E     SE+
Sbjct: 220 NTTLELLALNGNYVGALGASSFGAALKENTGLRSLQLNGNDIGNEGCIKLCEGLAARSEK 279

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN-TSNQSHM----SLKTGARLVEL 230
            N+ D   ++   +   +   +   + S  + N   N  +N        +LK   ++  L
Sbjct: 280 INNLDLGNNSIGPAAGPALRDYLKVDDSLTHLNLYMNELANDGCAAIAEALKDNKKIEML 339

Query: 231 DLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEG 290
           D+  N  G  G E LA  LR +   +L  L+L  N +G+ G K L+       E+ K  G
Sbjct: 340 DIGGNNIGGYGAEQLALALRDNS--SLTTLELGYNPIGVPGGKALA-------ETVKFHG 390

Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE-ENK 349
              AL     G  ++  EG    A   K  ++L  +++  N +   G+ ALS +    N+
Sbjct: 391 ---ALGTMRMGWCKIGKEGGFAFAEAIKYSQSLAVLDLRGNDLGDDGVAALSQSLAVVNE 447

Query: 350 NLRHLNLNDNTITYKGAIPLGQAL 373
            L +L+L  N I  KGA  L QA+
Sbjct: 448 VLTNLDLGYNEIKDKGAFALAQAI 471



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 1/162 (0%)

Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
           V ++G+N L +EGA  +A  F        V+M  NGI   G TAL +A + N  L  L+L
Sbjct: 86  VDVSGKN-LGDEGACFIAEAFAYNNVASCVDMSANGIGLDGTTALCEALKCNDTLTMLSL 144

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             N I   GA  L + L     +  LNL  C +   GA +IA+ L  NTT+  + +  N 
Sbjct: 145 ASNPIGDDGAKVLAEYLKVDKKITTLNLNACSIGDEGAKAIAEALKMNTTIISLEMNNNM 204

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +  +G   + +A+   T L+ + ++ N  G  G       +K
Sbjct: 205 VDYEGSGAMAQALAQNTTLELLALNGNYVGALGASSFGAALK 246



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 166/407 (40%), Gaps = 30/407 (7%)

Query: 49  TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 108
            IT K    L   + +L  +A +++    L   GA  IA+    N     V+++ N I +
Sbjct: 64  VITGKARRMLRDVMDELRRVATVDVSGKNLGDEGACFIAEAFAYNNVASCVDMSANGIGL 123

Query: 109 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEE 168
            G   L +A+K    L  ++++ N  G++G + + + +K       L L      CS  +
Sbjct: 124 DGTTALCEALKCNDTLTMLSLASNPIGDDGAKVLAEYLKVDKKITTLNLN----ACSIGD 179

Query: 169 QDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLV 228
           +  ++  E           L  N +  S        NN+   +  S     +L     L 
Sbjct: 180 EGAKAIAEA----------LKMNTTIISL-----EMNNNMVDYEGSGAMAQALAQNTTLE 224

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
            L L+ N  G +G       L+ +    L  L+LN N +G  GC  L + L     +++ 
Sbjct: 225 LLALNGNYVGALGASSFGAALKENT--GLRSLQLNGNDIGNEGCIKLCEGL-----AARS 277

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
           E     +     G N +       L    K   +L  + +  N + + G  A+++A ++N
Sbjct: 278 E----KINNLDLGNNSIGPAAGPALRDYLKVDDSLTHLNLYMNELANDGCAAIAEALKDN 333

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
           K +  L++  N I   GA  L  AL    SL  L LG   +   G  ++A+ +  +  L 
Sbjct: 334 KKIEMLDIGGNNIGGYGAEQLALALRDNSSLTTLELGYNPIGVPGGKALAETVKFHGALG 393

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
            + +   +I  +GG    +A+K    L  +++  N  G++GV  + +
Sbjct: 394 TMRMGWCKIGKEGGFAFAEAIKYSQSLAVLDLRGNDLGDDGVAALSQ 440



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 201/451 (44%), Gaps = 40/451 (8%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA------GA 83
           L D  +E +++  ++++   +  +GA  + +A       A  N+  C+  SA      G 
Sbjct: 73  LRDVMDELRRVATVDVSGKNLGDEGACFIAEAF------AYNNVASCVDMSANGIGLDGT 126

Query: 84  SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
           +++ + L  N TL  ++L  N I   G   L + +K   K+  +N++    G+EG + + 
Sbjct: 127 TALCEALKCNDTLTMLSLASNPIGDDGAKVLAEYLKVDKKITTLNLNACSIGDEGAKAIA 186

Query: 144 KLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDS-DAEGDNSNLSHNDSNHSHNASNQ 202
           + +K      +L + ++  +        ++  +N + +    N N        S  A+ +
Sbjct: 187 EALKMNTTIISLEMNNNMVDYEGSGAMAQALAQNTTLELLALNGNYVGALGASSFGAALK 246

Query: 203 SHNNSNQ----SHNTSNQSHMSLKTG-----ARLVELDLSDNAFGPIGVEGLADLLRSSC 253
            +          ++  N+  + L  G      ++  LDL +N+ GP     L D L+   
Sbjct: 247 ENTGLRSLQLNGNDIGNEGCIKLCEGLAARSEKINNLDLGNNSIGPAAGPALRDYLKVD- 305

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
             +L  L L  N L   GC  +++AL D    +KK      +++   G N +   GA+ L
Sbjct: 306 -DSLTHLNLYMNELANDGCAAIAEALKD----NKK------IEMLDIGGNNIGGYGAEQL 354

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           A   +   +L  +E+  N I   G  AL++  + +  L  + +    I  +G     +A+
Sbjct: 355 ALALRDNSSLTTLELGYNPIGVPGGKALAETVKFHGALGTMRMGWCKIGKEGGFAFAEAI 414

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
               SLA+L+L    L   G +++++ L   N  L +++L  NEI  +G   L +A+KN 
Sbjct: 415 KYSQSLAVLDLRGNDLGDDGVAALSQSLAVVNEVLTNLDLGYNEIKDKGAFALAQAIKNN 474

Query: 433 TK--LKQINVSEN---QFGEEGVEEMEKLMK 458
            +  L+ ++++ N   +FGE  + E  +L++
Sbjct: 475 AEGSLQTLSINNNYLTKFGEVALTEAVELVE 505



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 9/171 (5%)

Query: 290 GSPLALKV---FIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           G P A K     I G+ R      +ML  V  +L+ +  V++    +   G   +++AF 
Sbjct: 53  GPPKAKKQQQKVITGKAR------RMLRDVMDELRRVATVDVSGKNLGDEGACFIAEAFA 106

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N     ++++ N I   G   L +AL    +L +L+L    +   GA  +A+YL  +  
Sbjct: 107 YNNVASCVDMSANGIGLDGTTALCEALKCNDTLTMLSLASNPIGDDGAKVLAEYLKVDKK 166

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           +  +NL    I  +G   + +A+K  T +  + ++ N    EG   M + +
Sbjct: 167 ITTLNLNACSIGDEGAKAIAEALKMNTTIISLEMNNNMVDYEGSGAMAQAL 217



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 67/146 (45%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ML  V  +L+ +  V++    +   G   +++AF  N     ++++ N I   G   L +
Sbjct: 72  MLRDVMDELRRVATVDVSGKNLGDEGACFIAEAFAYNNVASCVDMSANGIGLDGTTALCE 131

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L +L+L    +   GA  +A+YL  +  +  +NL    I  +G   + +A+K 
Sbjct: 132 ALKCNDTLTMLSLASNPIGDDGAKVLAEYLKVDKKITTLNLNACSIGDEGAKAIAEALKM 191

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLM 146
            T +  + ++ N    EG   M + +
Sbjct: 192 NTTIISLEMNNNMVDYEGSGAMAQAL 217


>gi|399497880|emb|CCG20268.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|189521362|ref|XP_697924.3| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 2 [Danio rerio]
          Length = 980

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC-KLLSKAL 279
           LK   + V L L +N+ G +GVE L       C      L L NN +   G  KLL K +
Sbjct: 754 LKNLRKPVGLQLDNNSVGDVGVEQLL-----PCLPMCHSLYLRNNNISDEGIRKLLEKGI 808

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +C    K       + +F    N+L +   +  + + K  +    + +  N I  VG  
Sbjct: 809 -ECENFQK-------IALF---NNKLTDTCTQYFSCLLKSKQNFLALRLGNNNITSVGAE 857

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            L++    N++L+ L L  N +  +GA  L  AL+   +L  L+L D  + SAGA ++AK
Sbjct: 858 QLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLVDNGVGSAGACALAK 917

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           ++  N +LE++ L  N I  +G   L++A+K  T +K++ +  N
Sbjct: 918 FIRQNKSLEELWLNKNSICKEGVDCLIEALKMNTSVKKVWLRGN 961



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 63/113 (55%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I  VG   L++    N+ L+ L L  N +  +GA  L  AL+   +L  L+L D  + 
Sbjct: 849 NNITSVGAEQLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLVDNGVG 908

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           SAGA ++AK++  N +LE++ L  N I  +G   L++A+K  T +K++ +  N
Sbjct: 909 SAGACALAKFIRQNKSLEELWLNKNSICKEGVDCLIEALKMNTSVKKVWLRGN 961



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L L +N IT  GA  L + LS   SL  L L    +   GA  +A  LT++ TL  ++L 
Sbjct: 844 LRLGNNNITSVGAEQLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLV 903

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N +   G   L K ++    L+++ +++N   +EGV+ + + +K
Sbjct: 904 DNGVGSAGACALAKFIRQNKSLEELWLNKNSICKEGVDCLIEALK 948


>gi|156353814|ref|XP_001623106.1| predicted protein [Nematostella vectensis]
 gi|156209767|gb|EDO31006.1| predicted protein [Nematostella vectensis]
          Length = 550

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 12/239 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L     +  L++ D   G  G   +A LL+ +C   + EL +  N L  +G    ++ +
Sbjct: 172 ALMNNTTIASLNIRDCGIGSDGGVEVAKLLKENC--YITELDVAQNKLKTSGACAFAEVI 229

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            D         + +   + +A  N   N  A   A   +   TL+R+++ +N        
Sbjct: 230 QD---------NNVVTSLNLAW-NEFNNHDAARFAEALRTNHTLKRLDLSRNKFEEQAGI 279

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            L  A + N  L +LNL+ N +   GAI   + L    SL +L+L        GA ++ +
Sbjct: 280 YLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKGLRANCSLQVLDLSWNGFADEGAHAVGE 339

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L DN TL +++L+ N I+ +G L L + +K    LK + +  N    +G   +   M+
Sbjct: 340 SLKDNNTLLELDLSYNRITCKGALALAEGLKINNTLKVLKIGMNMIQNKGANALLDAMR 398



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 68/146 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A   +   TL+ +++ +N         L  A + N  L +LNL+ N +   GAI   + 
Sbjct: 253 FAEALRTNHTLKRLDLSRNKFEEQAGIYLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKG 312

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    SL +L+L        GA ++ + L DN TL +++L+ N I+ +G L L + +K  
Sbjct: 313 LRANCSLQVLDLSWNGFADEGAHAVGESLKDNNTLLELDLSYNRITCKGALALAEGLKIN 372

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK + +  N    +G   +   M+
Sbjct: 373 NTLKVLKIGMNMIQNKGANALLDAMR 398



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%)

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           T + V++  +G+   G  A+  A   N  +  LN+ D  I   G + + + L +   +  
Sbjct: 150 TTKAVDIKHHGLGPSGAKAIVTALMNNTTIASLNIRDCGIGSDGGVEVAKLLKENCYITE 209

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L++    LK++GA + A+ + DN  +  +NL  NE +        +A++    LK++++S
Sbjct: 210 LDVAQNKLKTSGACAFAEVIQDNNVVTSLNLAWNEFNNHDAARFAEALRTNHTLKRLDLS 269

Query: 442 ENQFGEEG 449
            N+F E+ 
Sbjct: 270 RNKFEEQA 277



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T + V++  +G+   G  A+  A   N  +  LN+ D  I   G + + + L +   +  
Sbjct: 150 TTKAVDIKHHGLGPSGAKAIVTALMNNTTIASLNIRDCGIGSDGGVEVAKLLKENCYITE 209

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L++    LK++GA + A+ + DN  +  +NL  NE +        +A++    LK++++S
Sbjct: 210 LDVAQNKLKTSGACAFAEVIQDNNVVTSLNLAWNEFNNHDAARFAEALRTNHTLKRLDLS 269

Query: 131 ENQFGEEG 138
            N+F E+ 
Sbjct: 270 RNKFEEQA 277



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 131/324 (40%), Gaps = 68/324 (20%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  + + A+ ++    L  +GA +I   L +NTT+  +N+    I   GG++
Sbjct: 138 GIVPVSFIMEHITTKAV-DIKHHGLGPSGAKAIVTALMNNTTIASLNIRDCGIGSDGGVE 196

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           + K +K    + +++V++N           KL  S   A A V++D+    S        
Sbjct: 197 VAKLLKENCYITELDVAQN-----------KLKTSGACAFAEVIQDNNVVTS-------- 237

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
                        NL+ N+ N+ H+A+  +                +L+T   L  LDLS
Sbjct: 238 ------------LNLAWNEFNN-HDAARFAE---------------ALRTNHTLKRLDLS 269

Query: 234 DNAFGPIGVEGLADLLRSSCCFA---LEELKLNNNGLGITGCKLLSKALH-DCYESSKKE 289
            N F     E  A +       A   LE L L+ N L   G    +K L  +C       
Sbjct: 270 RNKF-----EEQAGIYLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKGLRANC------- 317

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
               +L+V     N   +EGA  +    K   TL  +++  N I   G  AL++  + N 
Sbjct: 318 ----SLQVLDLSWNGFADEGAHAVGESLKDNNTLLELDLSYNRITCKGALALAEGLKINN 373

Query: 350 NLRHLNLNDNTITYKGAIPLGQAL 373
            L+ L +  N I  KGA  L  A+
Sbjct: 374 TLKVLKIGMNMIQNKGANALLDAM 397



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 55/102 (53%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N L   GA   A   +   +L+ +++  NG    G  A+ ++ ++N  L  L+L+ N IT
Sbjct: 299 NHLRGPGAIAFAKGLRANCSLQVLDLSWNGFADEGAHAVGESLKDNNTLLELDLSYNRIT 358

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
            KGA+ L + L    +L +L +G  ++++ GA+++   + +N
Sbjct: 359 CKGALALAEGLKINNTLKVLKIGMNMIQNKGANALLDAMRNN 400



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 65/146 (44%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   +  +++ QN +   G  A ++  ++N  +  LNL  N      A    +A
Sbjct: 197 VAKLLKENCYITELDVAQNKLKTSGACAFAEVIQDNNVVTSLNLAWNEFNNHDAARFAEA 256

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L     +      +   +  N  LE +NL+ N +   G +   K ++  
Sbjct: 257 LRTNHTLKRLDLSRNKFEEQAGIYLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKGLRAN 316

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L+ +++S N F +EG   + + +K
Sbjct: 317 CSLQVLDLSWNGFADEGAHAVGESLK 342



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 49/83 (59%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L+ +++  NG    G  A+ ++ ++N  L  L+L+ N IT KGA+ L + L    +L +
Sbjct: 318 SLQVLDLSWNGFADEGAHAVGESLKDNNTLLELDLSYNRITCKGALALAEGLKINNTLKV 377

Query: 71  LNLGDCLLKSAGASSIAKYLTDN 93
           L +G  ++++ GA+++   + +N
Sbjct: 378 LKIGMNMIQNKGANALLDAMRNN 400


>gi|399497870|emb|CCG20263.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIVIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G   +++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIVIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|156229394|emb|CAM28209.1| Ran GTPase activating protein [Nicotiana benthamiana]
          Length = 407

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 121/292 (41%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S     LEEL   N+G+        ++A+ +  
Sbjct: 122 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELYFINDGISQEA----ARAVSELV 175

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G +AL +
Sbjct: 176 PSTEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCE 229

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 230 ALGMCSHLKKLDLRDNMFGPEAGLVLSKALSKHEKLTEVYLSYLNLEDEGATAIANALKD 289

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSL++L                            +LG+  L   GA  IAK L  +  
Sbjct: 290 SAPSLSVLEMAGNDITQEAAPAIASCIAAKQFLSKLSLGENELMDEGAIQIAKALRGHNH 349

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L++V++  N +   G   L + + +K + K +NV+ N   EEGV+E++ + K
Sbjct: 350 LKEVDMNTNTLRRAGARVLARTVLHKDEFKLLNVNGNFISEEGVDELKDIFK 401



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G TA+++A +++   L  L +  N IT + A  +   ++    L+ L+LG+  L   GA 
Sbjct: 279 GATAIANALKDSAPSLSVLEMAGNDITQEAAPAIASCIAAKQFLSKLSLGENELMDEGAI 338

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L++V++  N +   G   L + + +K + K +NV+ N   EEGV+E++ 
Sbjct: 339 QIAKALRGHNHLKEVDMNTNTLRRAGARVLARTVLHKDEFKLLNVNGNFISEEGVDELKD 398

Query: 145 LMK 147
           + K
Sbjct: 399 IFK 401



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   LE        +   G +AL +A      L+ L+L DN    +  + L +A
Sbjct: 199 IAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGMCSHLKKLDLRDNMFGPEAGLVLSKA 258

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK   L  + L    L+  GA++IA  L D+  +L  + +  N+I+ +    +   +  
Sbjct: 259 LSKHEKLTEVYLSYLNLEDEGATAIANALKDSAPSLSVLEMAGNDITQEAAPAIASCIAA 318

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++++ EN+  +EG  ++ K ++
Sbjct: 319 KQFLSKLSLGENELMDEGAIQIAKALR 345



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L   ++ I+ + A  + + +     L +L
Sbjct: 125 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVL 184

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 185 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGMCSHLKKLDLRD 244

Query: 132 NQFGEEG 138
           N FG E 
Sbjct: 245 NMFGPEA 251



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 63/136 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE +    +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 153 LEELYFINDGISQEAARAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 212

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S++ + L   + L+ ++L  N    + GL L KA+    KL ++ +S 
Sbjct: 213 RCSSTRVGSEGGSALCEALGMCSHLKKLDLRDNMFGPEAGLVLSKALSKHEKLTEVYLSY 272

Query: 132 NQFGEEGVEEMEKLMK 147
               +EG   +   +K
Sbjct: 273 LNLEDEGATAIANALK 288


>gi|399498094|emb|CCG20375.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 550

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQTN--LEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMYSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMYSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|421897032|ref|ZP_16327415.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
 gi|206588197|emb|CAQ18765.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
          Length = 625

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 194/482 (40%), Gaps = 96/482 (19%)

Query: 6   FKKLKTLEHVEMPQNGIYHV--------GITALSDAFEENKKLRHLNLNDNTITYKGAIP 57
           FK   TLE ++    G+ H+        G++    A    + L+ L+LN   I  +GA  
Sbjct: 147 FKGELTLEALKALPPGVEHLDISRCTGRGVSNAGLAHLATRPLKSLSLNGIEIDAEGA-- 204

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
             + L+   SL  L+L  C +    A+++A+    + ++  ++L+ N I   G   L  A
Sbjct: 205 --RLLATCASLTSLSLTGCSIGDRAATALAQ----SRSIASLDLSVNMIGPDGARALASA 258

Query: 118 -------------------MKNKTKLKQINVSENQFGEEGVEEME--KLMKSFGMAAALV 156
                              +     LK +N S N  G+ GV       ++    +A  ++
Sbjct: 259 PLLSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMI 318

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHN-TSN 215
                           +   N S  E D S     D+     A ++S  + N  HN   +
Sbjct: 319 ----------GPAGARALRRNTSLTELDLSTNRLGDAGAQVLAGSRSLTSLNLRHNEIGD 368

Query: 216 QSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
               +L     L  L+LS   + PIG  G   L  S+    L EL L         C + 
Sbjct: 369 DGTEALARNTTLKSLNLS---YNPIGFWGAGALGGSTT---LRELDLRC-------CAI- 414

Query: 276 SKALHDCYESSKKEGSPLALKVFIA----GRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
                D Y +S      LA    +A    G NR+ ++GA+ LA      +TL  +++ +N
Sbjct: 415 -----DPYGASA-----LARNTSLASLHLGSNRIGDDGARALATS----RTLTLLDLSRN 460

Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
            I+  G  AL+     N +L  LNL  N +   GA     AL++ P L  LNLG   +  
Sbjct: 461 NIHDAGAQALAG----NGSLTSLNLYGNEVDDDGA----AALAQHPRLTSLNLGRNRIGP 512

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            GA  +AK    + TL +++L+ N I  +G     +A+   T L  +NVS N  GE+G  
Sbjct: 513 NGAQHLAK----SATLTELDLSENRIGPEG----AEALSLSTVLTTLNVSGNAIGEKGAR 564

Query: 452 EM 453
             
Sbjct: 565 AF 566



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 121/313 (38%), Gaps = 66/313 (21%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A V    ++L  + +  N I   G    ++A   N  L+ LNL+ N I + GA  LG + 
Sbjct: 347 AQVLAGSRSLTSLNLRHNEIGDDG----TEALARNTTLKSLNLSYNPIGFWGAGALGGST 402

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
           +    L  L+L  C +   GAS++A+    NT+L  ++L  N I    G D  +A+    
Sbjct: 403 T----LRELDLRCCAIDPYGASALAR----NTSLASLHLGSNRI----GDDGARALATSR 450

Query: 123 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
            L  +++S N   + G + +       G   +L L  +E    D+     ++    +   
Sbjct: 451 TLTLLDLSRNNIHDAGAQALA----GNGSLTSLNLYGNE--VDDDGAAALAQHPRLTSLN 504

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGV 242
              + +  N + H                         L   A L ELDLS+N  GP G 
Sbjct: 505 LGRNRIGPNGAQH-------------------------LAKSATLTELDLSENRIGPEGA 539

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 302
           E L      S    L  L ++ N +G  G +  +       E S       +L    A  
Sbjct: 540 EAL------SLSTVLTTLNVSGNAIGEKGARAFA-------EKST------SLTSLDARN 580

Query: 303 NRLENEGAKMLAA 315
           NR    GAKML A
Sbjct: 581 NRRGEAGAKMLEA 593



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 77/370 (20%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +    NGI   G+      F +N  L  LNL  N I   GA    +AL +  SL  
Sbjct: 283 TLKSLNASNNGIGDAGVLG----FADNTVLTQLNLAGNMIGPAGA----RALRRNTSLTE 334

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    L  AGA    + L  + +L  +NL  NEI    G D  +A+   T LK +N+S
Sbjct: 335 LDLSTNRLGDAGA----QVLAGSRSLTSLNLRHNEI----GDDGTEALARNTTLKSLNLS 386

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
            N  G             F  A AL      G  +  E D      +   A    S L+ 
Sbjct: 387 YNPIG-------------FWGAGAL-----GGSTTLRELDLRCCAIDPYGA----SALAR 424

Query: 191 NDSNHS-HNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
           N S  S H  SN+  ++  ++  TS            L  LDLS N     G + LA   
Sbjct: 425 NTSLASLHLGSNRIGDDGARALATSRT----------LTLLDLSRNNIHDAGAQALAG-- 472

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
                 +L  L L  N +   G   L++  H    S               GRNR+   G
Sbjct: 473 ----NGSLTSLNLYGNEVDDDGAAALAQ--HPRLTS------------LNLGRNRIGPNG 514

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
           A+ LA    K  TL  +++ +N I   G  ALS     +  L  LN++ N I  KGA   
Sbjct: 515 AQHLA----KSATLTELDLSENRIGPEGAEALS----LSTVLTTLNVSGNAIGEKGARAF 566

Query: 370 GQALSKLPSL 379
            +  + L SL
Sbjct: 567 AEKSTSLTSL 576


>gi|32966213|gb|AAP92143.1| leucine-rich repeat protein N4C [synthetic construct]
          Length = 305

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 13/229 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           ARL  LDL+ N     G++ LA +LRS+   +L EL L+NN LG  G +LL + L D   
Sbjct: 39  ARLEYLDLNWNDLTEAGMKDLASVLRSNP--SLRELDLSNNKLGDAGVRLLLQGLLDP-- 94

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
                G+   L+      + L   G K LA+V +   +L  + +  N +   G+  L   
Sbjct: 95  -----GT--RLENLDLNESDLTEAGLKDLASVLRSNPSLRELTLSNNKLGDAGVRLLLQG 147

Query: 345 -FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
             +    L  L+L+   +T  G   L   L   PSL  L+L    L  AG   + + L D
Sbjct: 148 LLDPGTRLEKLDLDQTDLTEAGMKDLASVLRSNPSLRELSLSSNKLGDAGVRLLLQGLLD 207

Query: 404 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
             T LE ++L  N+++     DL   +++   L+++++S N+ G+ GV 
Sbjct: 208 PGTRLEKLDLNQNDLTEADLKDLASVLRSNPSLRELSLSNNKLGDAGVR 256



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 24/246 (9%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
           +L +L+LN N +T  G   L   L   PSL  L+L +  L  AG   + + L D  T LE
Sbjct: 40  RLEYLDLNWNDLTEAGMKDLASVLRSNPSLRELDLSNNKLGDAGVRLLLQGLLDPGTRLE 99

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
           +++L  ++++  G  DL   +++   L+++ +S N+ G+ GV  + + +   G       
Sbjct: 100 NLDLNESDLTEAGLKDLASVLRSNPSLRELTLSNNKLGDAGVRLLLQGLLDPGTRL---- 155

Query: 158 EDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS 217
                    E+ D +  +  ++  +   S L  N S    + S      SN+  +   + 
Sbjct: 156 ---------EKLDLDQTDLTEAGMKDLASVLRSNPSLRELSLS------SNKLGDAGVRL 200

Query: 218 HMS--LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL 275
            +   L  G RL +LDL+ N      ++ LA +LRS+   +L EL L+NN LG  G +LL
Sbjct: 201 LLQGLLDPGTRLEKLDLNQNDLTEADLKDLASVLRSNP--SLRELSLSNNKLGDAGVRLL 258

Query: 276 SKALHD 281
            + L D
Sbjct: 259 LQGLLD 264



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 12/187 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L  G RL  LDL+++     G++ LA +LRS+   +L EL L+NN LG  G +LL + L 
Sbjct: 92  LDPGTRLENLDLNESDLTEAGLKDLASVLRSNP--SLRELTLSNNKLGDAGVRLLLQGLL 149

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
           D     +K             +  L   G K LA+V +   +L  + +  N +   G+  
Sbjct: 150 DPGTRLEK---------LDLDQTDLTEAGMKDLASVLRSNPSLRELSLSSNKLGDAGVRL 200

Query: 341 LSDAF-EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L     +    L  L+LN N +T      L   L   PSL  L+L +  L  AG   + +
Sbjct: 201 LLQGLLDPGTRLEKLDLNQNDLTEADLKDLASVLRSNPSLRELSLSNNKLGDAGVRLLLQ 260

Query: 400 YLTDNTT 406
            L D  T
Sbjct: 261 GLLDPGT 267



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQ 60
           LA+V +   +L  +++  N +   G+  L     +   +L +L+LN++ +T  G   L  
Sbjct: 59  LASVLRSNPSLRELDLSNNKLGDAGVRLLLQGLLDPGTRLENLDLNESDLTEAGLKDLAS 118

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
            L   PSL  L L +  L  AG   + + L D  T LE ++L   +++  G  DL   ++
Sbjct: 119 VLRSNPSLRELTLSNNKLGDAGVRLLLQGLLDPGTRLEKLDLDQTDLTEAGMKDLASVLR 178

Query: 120 NKTKLKQINVSENQFGEEGVE 140
           +   L+++++S N+ G+ GV 
Sbjct: 179 SNPSLRELSLSSNKLGDAGVR 199


>gi|224047579|ref|XP_002187217.1| PREDICTED: T-complex-associated testis-expressed protein 1
           [Taeniopygia guttata]
          Length = 459

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 254 CFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
           C  L+  KL  + +     KLL++ L         +  P  L++ ++  N + + GA+ L
Sbjct: 247 CRNLKVFKLTQSKVDDDKIKLLARNL---------QHHPCLLELDLS-HNLIRDHGAQAL 296

Query: 314 AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
             +    + LE + +  N I H+G  AL+    E+  L  LNL  N +  KG   +G AL
Sbjct: 297 GKLISHSR-LETLNLCNNQICHLGAQALAQGLAESSTLTSLNLRLNFVEDKGGEAIGHAL 355

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
               SL  L+LG   L    A+  ++ L  NTTL  ++ +CN + ++GG  L+K + N  
Sbjct: 356 LTNASLKSLHLGSNNLSEPTAAVFSQVLAQNTTLTSISFSCNHLGLEGGKQLLKGLANNK 415

Query: 434 KLKQINVSENQFGEE 448
            L ++++   +  +E
Sbjct: 416 TLTKLDLRHAEVDQE 430



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 65/126 (51%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  N I H+G  AL+    E+  L  LNL  N +  KG   +G AL    SL  L
Sbjct: 305 LETLNLCNNQICHLGAQALAQGLAESSTLTSLNLRLNFVEDKGGEAIGHALLTNASLKSL 364

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +LG   L    A+  ++ L  NTTL  ++ +CN + ++GG  L+K + N   L ++++  
Sbjct: 365 HLGSNNLSEPTAAVFSQVLAQNTTLTSISFSCNHLGLEGGKQLLKGLANNKTLTKLDLRH 424

Query: 132 NQFGEE 137
            +  +E
Sbjct: 425 AEVDQE 430


>gi|114612656|ref|XP_001165528.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 isoform 2 [Pan troglodytes]
 gi|410210458|gb|JAA02448.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410265490|gb|JAA20711.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410292634|gb|JAA24917.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
 gi|410332277|gb|JAA35085.1| nucleotide-binding oligomerization domain containing 1 [Pan
           troglodytes]
          Length = 953

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  L LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVLRLSVNQITDSGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N I+ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A+++ T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 11/207 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  L+L+ N +  +G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVLRLSVNQITDSGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKS 459
             LK + + +NQ   +G  ++   ++S
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQS 922



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 74/144 (51%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
           K + + +NQ   +G  ++   ++S
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQS 922



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  L L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVLRLSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     LR   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFSRLTVLR---LSVNQITDSGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|399497966|emb|CCG20311.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKILNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKCSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  +L    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKILNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKCSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKILNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKCSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399498018|emb|CCG20337.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 122/292 (41%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+      LEEL L N+G+        + A+ +  
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQPQT--NLEELFLMNDGISQEA----ANAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S+KK      LKV     N   +EGA  +A + K+   LE        +   G + L +
Sbjct: 267 PSTKK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 441 LIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQPQTNLEELFLMNDGISQEAANAVSELVPSTKKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQPQTNLEELFLMNDGISQEAANAVSELVPSTKK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     KKL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|399497900|emb|CCG20278.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKLLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKLLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKLLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399497958|emb|CCG20307.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 74/173 (42%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           LK      N L  +G +      +    LE + +  +GI      A+S+     + L+ L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
           + ++N    +GA+ + + + + P L         + S G S + + L   + L+ ++L  
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 467
           N    + GL L KA+ N   L +I +S     +EG   M   +K    + A++
Sbjct: 336 NMFGPEVGLVLCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVL 388



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 67/145 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALV 156
               +EG   M   +K    + A++
Sbjct: 364 LNLEDEGAIAMANALKDSAPSLAVL 388


>gi|68449790|gb|AAY97879.1| CARD15 [Danio rerio]
          Length = 969

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC-KLLSKAL 279
           LK   + V L L +N+ G +GVE L       C      L L NN +   G  KLL K +
Sbjct: 743 LKNLRKPVGLQLDNNSVGDVGVEQLL-----PCLPMCHSLYLRNNNISDEGIRKLLEKGI 797

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +C    K       + +F    N+L +   +  + + K  +    + +  N I  VG  
Sbjct: 798 -ECENFQK-------IALF---NNKLTDTCTQYFSCLLKSKQNFLALRLGNNNITSVGAE 846

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            L++    N++L+ L L  N +  +GA  L  AL+   +L  L+L D  + SAGA ++AK
Sbjct: 847 QLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLVDNGVGSAGACALAK 906

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           ++  N +LE++ L  N I  +G   L++A+K  T +K++ +  N
Sbjct: 907 FIRQNKSLEELWLNKNSICKEGVDCLIEALKMNTSVKKVWLRGN 950



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 63/113 (55%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I  VG   L++    N+ L+ L L  N +  +GA  L  AL+   +L  L+L D  + 
Sbjct: 838 NNITSVGAEQLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLVDNGVG 897

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           SAGA ++AK++  N +LE++ L  N I  +G   L++A+K  T +K++ +  N
Sbjct: 898 SAGACALAKFIRQNKSLEELWLNKNSICKEGVDCLIEALKMNTSVKKVWLRGN 950



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L L +N IT  GA  L + LS   SL  L L    +   GA  +A  LT++ TL  ++L 
Sbjct: 833 LRLGNNNITSVGAEQLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLV 892

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N +   G   L K ++    L+++ +++N   +EGV+ + + +K
Sbjct: 893 DNGVGSAGACALAKFIRQNKSLEELWLNKNSICKEGVDCLIEALK 937


>gi|281207706|gb|EFA81886.1| deliriumA [Polysphondylium pallidum PN500]
          Length = 617

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 13/237 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L T   L  LDLS N  G  G + L+  ++++    L  L L+ N  G  G  +++ ++
Sbjct: 324 ALGTNKTLTHLDLSQNCIGLKGSKALSTAIQTTK--TLHILNLSKNRFGTKGIDVIADSI 381

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                     G    L      RN +  + AK++  V K   TL+ +      +    + 
Sbjct: 382 ----------GKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFCDTSLKSDSMK 431

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            +S+  + ++ L  ++L+ N   YKG+  L  AL    SLA L+L    +   GA  IA+
Sbjct: 432 YISEGIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKGAIPIAE 491

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN-QFGEEGVEEMEK 455
            L DN +L +++L  N I  Q    L  A+K    L  +++S N + G  G   + +
Sbjct: 492 ALADNKSLTNLSLAFNNIGTQAAQQLGAAIKVNNSLVSLDISINAEIGPIGATSISE 548



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 12/223 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           +  L+LS N  G      +   L ++    +  L L+ N +G  G + +SKAL       
Sbjct: 275 ITTLELSQNGIGNKAATCIGTCLVNNT--TITHLNLSFNSIGNEGAEEISKAL------- 325

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
              G+   L      +N +  +G+K L+   +  KTL  + + +N     GI  ++D+  
Sbjct: 326 ---GTNKTLTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFGTKGIDVIADSIG 382

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
           +N  L +++ + N I+ K A  +G  +   P+L  LN  D  LKS     I++ +  + T
Sbjct: 383 KNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQASQT 442

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           L  ++L+ NE   +G   L  A+++   L  +++  N  G++G
Sbjct: 443 LNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDLCGNDIGDKG 485



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 37/335 (11%)

Query: 36  ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
           +NK +  L L+ N I  K A  +G  L    ++  LNL    + + GA  I+K L  N T
Sbjct: 271 DNKLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFNSIGNEGAEEISKALGTNKT 330

Query: 96  LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
           L  ++L+ N I ++G   L  A++    L  +N+S+N+FG +G++ +     S G    L
Sbjct: 331 LTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFGTKGIDVIA---DSIGKNTCL 387

Query: 156 VLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSN 215
           +         D  ++E SE+  ++   GD         NH    + QS N  + S  + +
Sbjct: 388 L-------NIDFSRNEISEK--NAKIIGDVI------KNH---PTLQSLNFCDTSLKSDS 429

Query: 216 QSHMS--LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCK 273
             ++S  ++    L  +DLS N FG  G + LA  L+ S   A   L L  N +G  G  
Sbjct: 430 MKYISEGIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAF--LDLCGNDIGDKGAI 487

Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG- 332
            +++AL D      K  + L+L       N +  + A+ L A  K   +L  +++  N  
Sbjct: 488 PIAEALAD-----NKSLTNLSLAF-----NNIGTQAAQQLGAAIKVNNSLVSLDISINAE 537

Query: 333 IYHVGITALSDAFEENKNL-RHLNLNDNTITYKGA 366
           I  +G T++S+    NK L + + L  N I  +G 
Sbjct: 538 IGPIGATSISEGLCYNKRLTQQIILTHNNINQQGV 572



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 127/305 (41%), Gaps = 55/305 (18%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+ H+ +  N I + G   +S A   NK L HL+L+ N I  KG+  L  A+    +L I
Sbjct: 302 TITHLNLSFNSIGNEGAEEISKALGTNKTLTHLDLSQNCIGLKGSKALSTAIQTTKTLHI 361

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN-- 128
           LNL      + G   IA  +  NT L +++ + NEIS +    +   +KN   L+ +N  
Sbjct: 362 LNLSKNRFGTKGIDVIADSIGKNTCLLNIDFSRNEISEKNAKIIGDVIKNHPTLQSLNFC 421

Query: 129 --------------------------VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEG 162
                                     +S N+FG +G + +   ++     A L L     
Sbjct: 422 DTSLKSDSMKYISEGIQASQTLNSIDLSRNEFGYKGSKSLAVALQHSNSLAFLDL----- 476

Query: 163 ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLK 222
            C ++  D+ +     ++A  DN +L           +N S   +N     + Q   ++K
Sbjct: 477 -CGNDIGDKGAIPI--AEALADNKSL-----------TNLSLAFNNIGTQAAQQLGAAIK 522

Query: 223 TGARLVELDLSDNA-FGPIGVEGLADLLRSSCCF---ALEELKLNNNGLGITGCKLLSKA 278
               LV LD+S NA  GPIG   +++ L    C+     +++ L +N +   G + +   
Sbjct: 523 VNNSLVSLDISINAEIGPIGATSISEGL----CYNKRLTQQIILTHNNINQQGVQTMKDT 578

Query: 279 LHDCY 283
           L   +
Sbjct: 579 LEQVF 583



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 7/162 (4%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N + N+ A  +        T+  + +  N I + G   +S A   NK L HL+L+ N I
Sbjct: 282 QNGIGNKAATCIGTCLVNNTTITHLNLSFNSIGNEGAEEISKALGTNKTLTHLDLSQNCI 341

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
             KG+  L  A+    +L ILNL      + G   IA  +  NT L +++ + NEIS + 
Sbjct: 342 GLKGSKALSTAIQTTKTLHILNLSKNRFGTKGIDVIADSIGKNTCLLNIDFSRNEISEKN 401

Query: 422 GLDLVKAMKNKTKLKQINVSEN-------QFGEEGVEEMEKL 456
              +   +KN   L+ +N  +        ++  EG++  + L
Sbjct: 402 AKIIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQASQTL 443



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 69/137 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+   +  KTL  + + +N     GI  ++D+  +N  L +++ + N I+ K A  +G  
Sbjct: 349 LSTAIQTTKTLHILNLSKNRFGTKGIDVIADSIGKNTCLLNIDFSRNEISEKNAKIIGDV 408

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +   P+L  LN  D  LKS     I++ +  + TL  ++L+ NE   +G   L  A+++ 
Sbjct: 409 IKNHPTLQSLNFCDTSLKSDSMKYISEGIQASQTLNSIDLSRNEFGYKGSKSLAVALQHS 468

Query: 122 TKLKQINVSENQFGEEG 138
             L  +++  N  G++G
Sbjct: 469 NSLAFLDLCGNDIGDKG 485



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 57/105 (54%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
           +NK +  L L+ N I  K A  +G  L    ++  LNL    + + GA  I+K L  N T
Sbjct: 271 DNKLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFNSIGNEGAEEISKALGTNKT 330

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           L  ++L+ N I ++G   L  A++    L  +N+S+N+FG +G++
Sbjct: 331 LTHLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFGTKGID 375



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 1/145 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++  V K   TL+ +      +    +  +S+  + ++ L  ++L+ N   YKG+  L  
Sbjct: 404 IIGDVIKNHPTLQSLNFCDTSLKSDSMKYISEGIQASQTLNSIDLSRNEFGYKGSKSLAV 463

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    SLA L+L    +   GA  IA+ L DN +L +++L  N I  Q    L  A+K 
Sbjct: 464 ALQHSNSLAFLDLCGNDIGDKGAIPIAEALADNKSLTNLSLAFNNIGTQAAQQLGAAIKV 523

Query: 121 KTKLKQINVSEN-QFGEEGVEEMEK 144
              L  +++S N + G  G   + +
Sbjct: 524 NNSLVSLDISINAEIGPIGATSISE 548



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 67/138 (48%)

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
           K +  +E+ QNGI +   T +      N  + HLNL+ N+I  +GA  + +AL    +L 
Sbjct: 273 KLITTLELSQNGIGNKAATCIGTCLVNNTTITHLNLSFNSIGNEGAEEISKALGTNKTLT 332

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
            L+L    +   G+ +++  +    TL  +NL+ N    +G   +  ++   T L  I+ 
Sbjct: 333 HLDLSQNCIGLKGSKALSTAIQTTKTLHILNLSKNRFGTKGIDVIADSIGKNTCLLNIDF 392

Query: 441 SENQFGEEGVEEMEKLMK 458
           S N+  E+  + +  ++K
Sbjct: 393 SRNEISEKNAKIIGDVIK 410


>gi|399497932|emb|CCG20294.1| Ran GTPase activating protein 2 [Solanum stenophyllidium]
          Length = 553

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G  L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GCNLKFLNLSDNALGEKGVRAFRKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITADAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNLISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFRKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 40/172 (23%)

Query: 312 MLAAVFKKLKTLE-------RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           +LAA+  +LK ++       R E     + HV   AL     E  NL+ LNL+DN +  K
Sbjct: 175 ILAALKDQLKEIDLSDFVAGRNEAEALDVMHVFSEAL-----EGCNLKFLNLSDNALGEK 229

Query: 365 GAIPL------------------------GQALSKL-PS---LAILNLGDCLLKSAGASS 396
           G                              A+S+L PS   L +L+  + +    GA +
Sbjct: 230 GVRAFRKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVA 289

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +N FG E
Sbjct: 290 IAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPE 341


>gi|426234291|ref|XP_004011130.1| PREDICTED: uncharacterized protein C14orf166B homolog [Ovis aries]
          Length = 492

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 127/254 (50%), Gaps = 23/254 (9%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   ++ L+L+DN     G+  L ++L+ +  + L+E+ +++N LG+ G ++LS+ 
Sbjct: 110 IALVSNTTVLTLELADNCIMKEGILSLVEMLQEN--YYLQEMNVSDNDLGLEGARILSEF 167

Query: 279 LHDCYES----------SKKEGSPL---------ALKVFIAGRNRLENEGAKMLAAVFKK 319
           L +   S           K+E + L          +K      N+  ++  + L  +   
Sbjct: 168 LQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSHNQFCHKAGEYLGQMLAI 227

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L+ +++  N +Y  G+ AL +    N +L+ L+L+ N+   +GA  LG+ L     L
Sbjct: 228 NVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYL 287

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
             L+L    + + G S I++ L  N +L+ + L  N IS+ G L L+ ++K   K++++ 
Sbjct: 288 TYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGALLLILSIKRNPKSRMED 347

Query: 438 INVSENQFGEEGVE 451
           I++S     E+ V+
Sbjct: 348 IDISNVLVSEQFVK 361



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 2/131 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N +Y  G+ AL +    N  L+ L+L+ N+   +GA  LG+ L     L  L
Sbjct: 231 LQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYLTYL 290

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           +L    + + G S I++ L  N +L+ + L  N IS+ G L L+ ++K   K++++ I++
Sbjct: 291 DLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGALLLILSIKRNPKSRMEDIDI 350

Query: 130 SENQFGEEGVE 140
           S     E+ V+
Sbjct: 351 SNVLVSEQFVK 361



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 29/279 (10%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NTT+  + L  N I  +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYVNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILS 135

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++NVS+N  G EG   + + +++    ++L+     G    EE  E  
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQN--NTSSLLSLQLAGNNFKEESAELF 193

Query: 174 EEENDSDAEGDNSNLSHNDSNHS---HNASNQSHNNSNQSHNTSNQSHM----------S 220
            +   ++    + +LSHN   H    +     + N   QS + S  +H+           
Sbjct: 194 CQALSNNYRIKSLDLSHNQFCHKAGEYLGQMLAINVGLQSLDLS-WNHLYIRGVVALCNG 252

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L++   L +LDLS N+FG  G   L ++LR +    L  L L++N +   G   +S+AL 
Sbjct: 253 LRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNS--YLTYLDLSSNNITNDGLSKISRAL- 309

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           +  ES K       LK+F+   N +  +GA +L    K+
Sbjct: 310 ELNESLK------VLKLFL---NPISMDGALLLILSIKR 339



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 29/180 (16%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           +G K +A       T+  +E+  N I   GI +L +  +EN  L+ +N++DN +  +GA 
Sbjct: 103 KGTKAIAIALVSNTTVLTLELADNCIMKEGILSLVEMLQENYYLQEMNVSDNDLGLEGAR 162

Query: 368 PLG-----------------------------QALSKLPSLAILNLGDCLLKSAGASSIA 398
            L                              QALS    +  L+L            + 
Sbjct: 163 ILSEFLQNNTSSLLSLQLAGNNFKEESAELFCQALSNNYRIKSLDLSHNQFCHKAGEYLG 222

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L  N  L+ ++L+ N + ++G + L   +++   LK++++S N FG EG   + ++++
Sbjct: 223 QMLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLR 282



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 29/166 (17%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLG----------- 59
           T+  +E+  N I   GI +L +  +EN  L+ +N++DN +  +GA  L            
Sbjct: 117 TVLTLELADNCIMKEGILSLVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLL 176

Query: 60  ------------------QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
                             QALS    +  L+L            + + L  N  L+ ++L
Sbjct: 177 SLQLAGNNFKEESAELFCQALSNNYRIKSLDLSHNQFCHKAGEYLGQMLAINVGLQSLDL 236

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           + N + ++G + L   +++   LK++++S N FG EG   + ++++
Sbjct: 237 SWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLR 282



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G +P+   +  +   + +NL    L   G  +IA  L  NTT+  + L  N I  +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYVNLNHHGLGPKGTKAIAIALVSNTTVLTLELADNCIMKEGILS 135

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           LV+ ++    L+++NVS+N  G EG   + + ++
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQ 169


>gi|297680729|ref|XP_002818131.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 isoform 2 [Pongo abelii]
          Length = 953

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  L LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KRLTHLKL-----GKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N I+ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A+++ T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  L+L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVLRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKRLTHLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKS 459
             LK + + +NQ   +G  ++   ++S
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQS 922



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 75/140 (53%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K K + ++ +  N I  VG   ++   +E K+L HL L  N IT +G   L  A+    S
Sbjct: 754 KYKIVTYLGLYNNQITDVGARYVTKILDECKRLTHLKLGKNKITSEGGKCLALAVKNSKS 813

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           ++ + +    +   GA + A+ L ++ +L  ++L  N IS +GG  L +A++  T L+ +
Sbjct: 814 ISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEIL 873

Query: 128 NVSENQFGEEGVEEMEKLMK 147
            +++N+  +E  E + +++K
Sbjct: 874 WLTQNELNDEVAESLAEMLK 893



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 74/144 (51%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKRLTHLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
           K + + +NQ   +G  ++   ++S
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQS 922



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  L L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFS---RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKRLTHLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     LR   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFSRLTVLR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKRLTHLKLGKNKITSEGGKCLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|440798171|gb|ELR19239.1| calponin (CH) domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 918

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 12/168 (7%)

Query: 252 SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
           +    L  L L+NN +G  G   L++ L     S+ K      +KV    RN +++EG +
Sbjct: 707 TAVPGLVSLNLSNNRIGSKGVSKLAETL-----STHKH-----IKVLNLARNEIDDEGFQ 756

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVG--ITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
            LAAVFK    LE+V + +N I       T  + AF   + L  L+LN N +  + A  L
Sbjct: 757 RLAAVFKHNVDLEQVTLTRNKITGASGSFTEAAQAFSSLEKLSRLSLNRNQLGDEAAFEL 816

Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            +     PSL ++ L +  + +AGA++I   L  NT++  V+L+ N I
Sbjct: 817 AKVFQTHPSLVVVKLQNNKIGTAGAAAIFDALKANTSVTQVSLSYNLI 864



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 2/151 (1%)

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           K+L  +F+  K +ERV +    +       ++        L  LNL++N I  KG   L 
Sbjct: 672 KILRTLFENHKEVERVSLSGTDLDDEKTAHVAKFLTAVPGLVSLNLSNNRIGSKGVSKLA 731

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG--LDLVKA 428
           + LS    + +LNL    +   G   +A     N  LE V LT N+I+   G   +  +A
Sbjct: 732 ETLSTHKHIKVLNLARNEIDDEGFQRLAAVFKHNVDLEQVTLTRNKITGASGSFTEAAQA 791

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +  KL +++++ NQ G+E   E+ K+ ++
Sbjct: 792 FSSLEKLSRLSLNRNQLGDEAAFELAKVFQT 822



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVG--ITALSDAFEENKKLRHLNLNDNTITYKGAIPLG 59
           LAAVFK    LE V + +N I       T  + AF   +KL  L+LN N +  + A  L 
Sbjct: 758 LAAVFKHNVDLEQVTLTRNKITGASGSFTEAAQAFSSLEKLSRLSLNRNQLGDEAAFELA 817

Query: 60  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 106
           +     PSL ++ L +  + +AGA++I   L  NT++  V+L+ N I
Sbjct: 818 KVFQTHPSLVVVKLQNNKIGTAGAAAIFDALKANTSVTQVSLSYNLI 864



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L  LNL++N I  KG   L + LS    + +LNL    +   G   +A     N  LE V
Sbjct: 712 LVSLNLSNNRIGSKGVSKLAETLSTHKHIKVLNLARNEIDDEGFQRLAAVFKHNVDLEQV 771

Query: 100 NLTCNEISVQGG--LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            LT N+I+   G   +  +A  +  KL +++++ NQ G+E   E+ K+ ++
Sbjct: 772 TLTRNKITGASGSFTEAAQAFSSLEKLSRLSLNRNQLGDEAAFELAKVFQT 822



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%)

Query: 9   LKTLEHVE---MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGA----IPLGQA 61
           L T +H++   + +N I   G   L+  F+ N  L  + L  N IT  GA        QA
Sbjct: 734 LSTHKHIKVLNLARNEIDDEGFQRLAAVFKHNVDLEQVTLTRNKIT--GASGSFTEAAQA 791

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            S L  L+ L+L    L    A  +AK    + +L  V L  N+I   G   +  A+K  
Sbjct: 792 FSSLEKLSRLSLNRNQLGDEAAFELAKVFQTHPSLVVVKLQNNKIGTAGAAAIFDALKAN 851

Query: 122 TKLKQINVSENQFGEEGVEEMEKLM 146
           T + Q+++S N  G + +  +++L 
Sbjct: 852 TSVTQVSLSYNLIGNDALSNLKELF 876



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 55/105 (52%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L   FE +K++  ++L+   +  +    + + L+ +P L  LNL +  + S G S +A+ 
Sbjct: 674 LRTLFENHKEVERVSLSGTDLDDEKTAHVAKFLTAVPGLVSLNLSNNRIGSKGVSKLAET 733

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           L+ +  ++ +NL  NEI  +G   L    K+   L+Q+ ++ N+ 
Sbjct: 734 LSTHKHIKVLNLARNEIDDEGFQRLAAVFKHNVDLEQVTLTRNKI 778


>gi|399497838|emb|CCG20247.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEAHGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAHGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAHGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497942|emb|CCG20299.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  L+  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  L+  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNLISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399498102|emb|CCG20379.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 97/228 (42%), Gaps = 20/228 (8%)

Query: 230 LDLSDNAFGPIGVEGLADLLR---------SSCCFALEELKLNNNGLGITGCKLLSKALH 280
            D+S      IG E   +LL+         S  CF+       N   GI   ++    L 
Sbjct: 125 FDISKGKRAFIGAEEAQELLKPLKEPGNSYSKICFS-------NRSFGIDAARIAGPILA 177

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
              +  K+    + L  F+AGR+  E   A  + +   +   L+ + +  N +   G+ A
Sbjct: 178 ALKDQLKE----VDLSDFVAGRHEAEALDAMNIFSEALEGSNLKFLNLSDNALGEKGVRA 233

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
                +   NL  L L ++ I+ + A  + + +     L +L+  + +    GA +IA+ 
Sbjct: 234 FGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEI 293

Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           +  +  LED   +   +  +GG  L +A+   + LK++++ +N FG E
Sbjct: 294 VKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPE 341



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 63/136 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEGVEEMEKLMK 147
               +EG   M   +K
Sbjct: 364 LNLEDEGAIAMANALK 379


>gi|399497948|emb|CCG20302.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G  L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GCNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITADAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNLISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341


>gi|167536250|ref|XP_001749797.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771724|gb|EDQ85386.1| predicted protein [Monosiga brevicollis MX1]
          Length = 445

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 132/326 (40%), Gaps = 55/326 (16%)

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
           EE     AE D SN +  D      A +  HNN    +  S+ S +   T   L  LDLS
Sbjct: 16  EENKGKHAELDYSNRALGDKRLQRMAES-IHNNRRCFNLDSDPSCLDRST---LCRLDLS 71

Query: 234 DNAFGPIGVEGLADLL-RSSCCFALEELKLNNNGLGITGCKLLSKA-----------LHD 281
           +      GV  L D+L   +    +E L LNNN LG  G + L +A           L++
Sbjct: 72  NTNITGAGVRFLCDVLANGNGLLNVEALVLNNNALGPDGGRFLGRAIKMNGSLKHIKLNN 131

Query: 282 CY---ESSKKEGSPL-----ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           C    E +      L      L + +AG N L +  A+ +  +    + LE + + QN I
Sbjct: 132 CALGDEGALAIAQGLQENLSVLTIEMAG-NLLSDRTAQAMGNMLAHNQHLEGLSLFQNSI 190

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG-------- 385
              G   L D    N +LR L+L  N I   G +    AL  L +L  L LG        
Sbjct: 191 LAAGAKYLCDGLSMNASLRWLSLGSNNIGSDGMLHFKHALPHL-NLQWLALGGNSIGDAG 249

Query: 386 -----------DCLLKS----------AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
                       C L+S           G   I K L  NT LE + L  N I V+G  +
Sbjct: 250 LQHLAEALADEHCPLQSLGLGGNNISDIGMKDICKALWSNTGLEALGLGGNRIGVEGCEE 309

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGV 450
           L + + +   L+++ +S NQ  +EG+
Sbjct: 310 LAQMLTSNRSLRRLVLSSNQIDDEGL 335



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 146/373 (39%), Gaps = 62/373 (16%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRH---LNLNDNTITYKGAIPLGQALSKLPS 67
           TL  +++    I   G+  L D       L +   L LN+N +   G   LG+A+    S
Sbjct: 64  TLCRLDLSNTNITGAGVRFLCDVLANGNGLLNVEALVLNNNALGPDGGRFLGRAIKMNGS 123

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L  + L +C L   GA +IA+ L +N ++  + +  N +S +      +AM N       
Sbjct: 124 LKHIKLNNCALGDEGALAIAQGLQENLSVLTIEMAGNLLSDR----TAQAMGNM------ 173

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
            ++ NQ     +E +     S   A A  L D                            
Sbjct: 174 -LAHNQH----LEGLSLFQNSILAAGAKYLCD---------------------------G 201

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
           LS N S    +  + +  +    H      H++L+       L L  N+ G  G++ LA+
Sbjct: 202 LSMNASLRWLSLGSNNIGSDGMLHFKHALPHLNLQW------LALGGNSIGDAGLQHLAE 255

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
            L    C  L+ L L  N +   G K + KAL           S   L+    G NR+  
Sbjct: 256 ALADEHC-PLQSLGLGGNNISDIGMKDICKALW----------SNTGLEALGLGGNRIGV 304

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           EG + LA +    ++L R+ +  N I   G+  +++   +N++L  L +  N  T  GA 
Sbjct: 305 EGCEELAQMLTSNRSLRRLVLSSNQIDDEGLMVIAEGLCKNEHLHTLLIAANPFTMDGAW 364

Query: 368 PLGQALSKLPSLA 380
            L Q L K  S A
Sbjct: 365 YLAQRLEKSKSFA 377



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 70/358 (19%), Positives = 138/358 (38%), Gaps = 64/358 (17%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           L  +E + +  N +   G   L  A + N  L+H+ LN+  +  +GA+ + Q L +  S+
Sbjct: 93  LLNVEALVLNNNALGPDGGRFLGRAIKMNGSLKHIKLNNCALGDEGALAIAQGLQENLSV 152

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             + +   LL    A ++   L  N  LE ++L  N I   G   L   +     L+ ++
Sbjct: 153 LTIEMAGNLLSDRTAQAMGNMLAHNQHLEGLSLFQNSILAAGAKYLCDGLSMNASLRWLS 212

Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNL 188
           +  N  G +G+   +  +    +    +  +  G+   +   E   +E            
Sbjct: 213 LGSNNIGSDGMLHFKHALPHLNLQWLALGGNSIGDAGLQHLAEALADE------------ 260

Query: 189 SHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADL 248
                                        H  L++      L L  N    IG++ +   
Sbjct: 261 -----------------------------HCPLQS------LGLGGNNISDIGMKDICKA 285

Query: 249 LRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENE 308
           L S+    LE L L  N +G+ GC+ L++ L           S  +L+  +   N++++E
Sbjct: 286 LWSNT--GLEALGLGGNRIGVEGCEELAQMLT----------SNRSLRRLVLSSNQIDDE 333

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-----NLRHLNLNDNTI 361
           G  ++A    K + L  + +  N     G   L+   E++K     +LR L+++++ +
Sbjct: 334 GLMVIAEGLCKNEHLHTLLIAANPFTMDGAWYLAQRLEKSKSFANHDLRVLDIHESAL 391



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 12  LEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L+ + +  N I   G+  L++A  +E+  L+ L L  N I+  G   + +AL     L  
Sbjct: 235 LQWLALGGNSIGDAGLQHLAEALADEHCPLQSLGLGGNNISDIGMKDICKALWSNTGLEA 294

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L LG   +   G   +A+ LT N +L  + L+ N+I  +G + + + +     L  + ++
Sbjct: 295 LGLGGNRIGVEGCEELAQMLTSNRSLRRLVLSSNQIDDEGLMVIAEGLCKNEHLHTLLIA 354

Query: 131 ENQFGEEGVEEMEKLM---KSFGMAAALVLEDDEG--ECSDEEQ 169
            N F  +G   + + +   KSF      VL+  E   + +DEE+
Sbjct: 355 ANPFTMDGAWYLAQRLEKSKSFANHDLRVLDIHESALQPADEEK 398



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 60/222 (27%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEE------------------------ 36
            L    K   +L+H+++    +   G  A++   +E                        
Sbjct: 113 FLGRAIKMNGSLKHIKLNNCALGDEGALAIAQGLQENLSVLTIEMAGNLLSDRTAQAMGN 172

Query: 37  ----NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG------DCLLK------- 79
               N+ L  L+L  N+I   GA  L   LS   SL  L+LG      D +L        
Sbjct: 173 MLAHNQHLEGLSLFQNSILAAGAKYLCDGLSMNASLRWLSLGSNNIGSDGMLHFKHALPH 232

Query: 80  --------------SAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
                          AG   +A+ L D +  L+ + L  N IS  G  D+ KA+ + T L
Sbjct: 233 LNLQWLALGGNSIGDAGLQHLAEALADEHCPLQSLGLGGNNISDIGMKDICKALWSNTGL 292

Query: 125 KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE----DDEG 162
           + + +  N+ G EG EE+ +++ S      LVL     DDEG
Sbjct: 293 EALGLGGNRIGVEGCEELAQMLTSNRSLRRLVLSSNQIDDEG 334


>gi|399497934|emb|CCG20295.1| Ran GTPase activating protein 2 [Solanum stenophyllidium]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G  L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GCNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITADAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNLISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341


>gi|399497840|emb|CCG20248.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V++  N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399497892|emb|CCG20274.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKRLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKRLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399498012|emb|CCG20334.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|348688311|gb|EGZ28125.1| hypothetical protein PHYSODRAFT_554392 [Phytophthora sojae]
          Length = 480

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 2/172 (1%)

Query: 299 IAGRN-RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
           +A RN RLE+EG  ++A       T+ ++ +  + I   G  ALS     N  L HL+L 
Sbjct: 242 LAQRNKRLESEGCALVARSLSTNHTVRKLIIRDHAIEDDGAVALSKMLCNNTTLEHLDLV 301

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            N I  +GA  L QAL    SL  L+L + L+   GA ++A+ +  N TL  + LT N I
Sbjct: 302 GNAIGDRGAEALAQALYGHDSLTHLSLANNLITDRGAEALAQAIRCNCTLRTLELTNNRI 361

Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
           +  G L L+ A+     ++ I++ EN      VE       +   A AL+LE
Sbjct: 362 TRVGALALLDALDVNLYVETISLDENNV-PAFVESQLAAAFARNRAQALILE 412



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  ALS     N  L HL+L  N I  +GA  L QAL    SL  L+L + L+   GA +
Sbjct: 281 GAVALSKMLCNNTTLEHLDLVGNAIGDRGAEALAQALYGHDSLTHLSLANNLITDRGAEA 340

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +A+ +  N TL  + LT N I+  G L L+ A+     ++ I++ EN      VE     
Sbjct: 341 LAQAIRCNCTLRTLELTNNRITRVGALALLDALDVNLYVETISLDENNV-PAFVESQLAA 399

Query: 146 MKSFGMAAALVLEDDEGE 163
             +   A AL+LE    E
Sbjct: 400 AFARNRAQALILESHAAE 417


>gi|301113462|ref|XP_002998501.1| myosin-like protein [Phytophthora infestans T30-4]
 gi|262111802|gb|EEY69854.1| myosin-like protein [Phytophthora infestans T30-4]
          Length = 274

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%)

Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
           L LK   A + +L + G  ++  VF+  +T+ R+ +P + I  VG  ++ +    N  L+
Sbjct: 53  LDLKDMAAKKRKLRSPGGDLVGRVFQLNRTVRRLLLPGHEIEDVGAKSMGNMLRANNTLQ 112

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
           HL+L  N IT +GA  +  AL    SL  L L    L   GA ++A+ +  N +L+ + L
Sbjct: 113 HLDLRGNEITGEGARAISDALYGHESLEHLGLSSNKLGDEGAKAVAQMIPYNISLKYLGL 172

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
             N I  +GG  L++A+     L  + + +N   +E ++++ 
Sbjct: 173 AYNGIGEEGGKALLEAVLQNRSLVMVQLVKNDIPQEILDKIR 214



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 73/143 (51%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++  VF+  +T+  + +P + I  VG  ++ +    N  L+HL+L  N IT +GA  +  
Sbjct: 72  LVGRVFQLNRTVRRLLLPGHEIEDVGAKSMGNMLRANNTLQHLDLRGNEITGEGARAISD 131

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    SL  L L    L   GA ++A+ +  N +L+ + L  N I  +GG  L++A+  
Sbjct: 132 ALYGHESLEHLGLSSNKLGDEGAKAVAQMIPYNISLKYLGLAYNGIGEEGGKALLEAVLQ 191

Query: 121 KTKLKQINVSENQFGEEGVEEME 143
              L  + + +N   +E ++++ 
Sbjct: 192 NRSLVMVQLVKNDIPQEILDKIR 214


>gi|399498112|emb|CCG20384.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALGKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + +  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEASSAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALGKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|399498010|emb|CCG20333.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--DLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTDLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTDLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|399497990|emb|CCG20323.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|410904911|ref|XP_003965935.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Takifugu rubripes]
          Length = 929

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 11/193 (5%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           ++ L L +N L   G +L+++ + +C +          L+V   G+N + + G + LAA 
Sbjct: 734 IQTLGLYSNHLTDVGAELVARVIEECPK----------LQVVKIGKNNITHVGGRRLAAA 783

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            +K  ++  V M  N I   G  A S+A + + +L +L+L+ N IT +G   L +AL   
Sbjct: 784 IQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSLTNLSLSVNGITSRGGRCLAEALQHN 843

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
             L I  L         A  +A+ +  NT L  + L  N ++V+G   L +A+ + T LK
Sbjct: 844 SVLRIFWLVQNEFTDEVAPHLAELIRANTGLSHLWLISNRLTVEGIGQLAEALGHNTTLK 903

Query: 437 QINVSENQF-GEE 448
           +I V  NQ  GEE
Sbjct: 904 EICVKGNQVSGEE 916



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 24/232 (10%)

Query: 239 PIGVEGLADL-LRSSCC----FALEE------LKLNNNGLGITGCKLLSKALHDCYESSK 287
           P G+  LA L + SS C    F L+       L ++NN +G  G K L          SK
Sbjct: 652 PAGLLKLAYLNMFSSDCTAVSFVLQHQPKLYGLDMDNNNIGDYGVKQLRPMF------SK 705

Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
                  L +     N L +   ++LA    K K ++ + +  N +  VG   ++   EE
Sbjct: 706 -------LTILRLSVNNLYDGSVEVLAEEICKYKIIQTLGLYSNHLTDVGAELVARVIEE 758

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
              L+ + +  N IT+ G   L  A+ K  S+  + +    +   GA + ++ L ++ +L
Sbjct: 759 CPKLQVVKIGKNNITHVGGRRLAAAIQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSL 818

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            +++L+ N I+ +GG  L +A+++ + L+   + +N+F +E    + +L+++
Sbjct: 819 TNLSLSVNGITSRGGRCLAEALQHNSVLRIFWLVQNEFTDEVAPHLAELIRA 870



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 79/148 (53%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA    K K ++ + +  N +  VG   ++   EE  KL+ + +  N IT+ G   L  
Sbjct: 723 VLAEEICKYKIIQTLGLYSNHLTDVGAELVARVIEECPKLQVVKIGKNNITHVGGRRLAA 782

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           A+ K  S+  + +    +   GA + ++ L ++ +L +++L+ N I+ +GG  L +A+++
Sbjct: 783 AIQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSLTNLSLSVNGITSRGGRCLAEALQH 842

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
            + L+   + +N+F +E    + +L+++
Sbjct: 843 NSVLRIFWLVQNEFTDEVAPHLAELIRA 870



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 1/137 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAA  +K  ++  V M  N I   G  A S+A + +  L +L+L+ N IT +G   L +A
Sbjct: 780 LAAAIQKSTSIFDVGMWGNCIGDEGAEAFSEALKNHPSLTNLSLSVNGITSRGGRCLAEA 839

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L I  L         A  +A+ +  NT L  + L  N ++V+G   L +A+ + 
Sbjct: 840 LQHNSVLRIFWLVQNEFTDEVAPHLAELIRANTGLSHLWLISNRLTVEGIGQLAEALGHN 899

Query: 122 TKLKQINVSENQF-GEE 137
           T LK+I V  NQ  GEE
Sbjct: 900 TTLKEICVKGNQVSGEE 916



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 70/142 (49%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A V ++   L+ V++ +N I HVG   L+ A +++  +  + +  N I  +GA    +
Sbjct: 751 LVARVIEECPKLQVVKIGKNNITHVGGRRLAAAIQKSTSIFDVGMWGNCIGDEGAEAFSE 810

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL   PSL  L+L    + S G   +A+ L  N+ L    L  NE + +    L + ++ 
Sbjct: 811 ALKNHPSLTNLSLSVNGITSRGGRCLAEALQHNSVLRIFWLVQNEFTDEVAPHLAELIRA 870

Query: 121 KTKLKQINVSENQFGEEGVEEM 142
            T L  + +  N+   EG+ ++
Sbjct: 871 NTGLSHLWLISNRLTVEGIGQL 892



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 5/147 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIP-LGQ 60
           ++ V +    L  ++M  N I   G+  L   F    KL  L L+ N + Y G++  L +
Sbjct: 671 VSFVLQHQPKLYGLDMDNNNIGDYGVKQLRPMFS---KLTILRLSVNNL-YDGSVEVLAE 726

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            + K   +  L L    L   GA  +A+ + +   L+ V +  N I+  GG  L  A++ 
Sbjct: 727 EICKYKIIQTLGLYSNHLTDVGAELVARVIEECPKLQVVKIGKNNITHVGGRRLAAAIQK 786

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
            T +  + +  N  G+EG E   + +K
Sbjct: 787 STSIFDVGMWGNCIGDEGAEAFSEALK 813


>gi|399498002|emb|CCG20329.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEVASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|399497972|emb|CCG20314.1| Ran GTPase activating protein 2 [Solanum kurtzianum]
          Length = 553

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLESQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     E    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|357290865|gb|AET73465.1| hypothetical protein EMVG_00179 [Emiliania huxleyi virus PS401]
          Length = 335

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 12/153 (7%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK+   + EL L DN F   G + LA  LR +   AL  L L +N +G  G K L+ AL 
Sbjct: 135 LKSNEVITELVLVDNNFPVAGAKALASALRVNT--ALTNLVLWDNNIGAEGAKALASALR 192

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                         L +   GRN + +EGAK LA+  +  K L  +++  NGI + G  A
Sbjct: 193 INE----------VLTLLELGRNGIGDEGAKALASTLRVNKVLTELDLTNNGITNTGAEA 242

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
           L+ A   N +L+ L L +N I  +GA+ L  AL
Sbjct: 243 LASALRVNGSLKSLWLPNNRIGNEGAVALASAL 275



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA  +A   K  + +  + +  N     G  AL+ A   N  L +L L DN I  +GA  
Sbjct: 127 GANAIARFLKSNEVITELVLVDNNFPVAGAKALASALRVNTALTNLVLWDNNIGAEGAKA 186

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           L  AL     L +L LG   +   GA ++A  L  N  L +++LT N I+  G   L  A
Sbjct: 187 LASALRINEVLTLLELGRNGIGDEGAKALASTLRVNKVLTELDLTNNGITNTGAEALASA 246

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           ++    LK + +  N+ G EG   +   ++
Sbjct: 247 LRVNGSLKSLWLPNNRIGNEGAVALASALR 276



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 66/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  + +  + +  N     G  AL+ A   N  L +L L DN I  +GA  L  A
Sbjct: 131 IARFLKSNEVITELVLVDNNFPVAGAKALASALRVNTALTNLVLWDNNIGAEGAKALASA 190

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L +L LG   +   GA ++A  L  N  L +++LT N I+  G   L  A++  
Sbjct: 191 LRINEVLTLLELGRNGIGDEGAKALASTLRVNKVLTELDLTNNGITNTGAEALASALRVN 250

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK + +  N+ G EG   +   ++
Sbjct: 251 GSLKSLWLPNNRIGNEGAVALASALR 276



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 241 GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
           G   +A  L+S+    + EL L +N   + G K L+ AL              AL   + 
Sbjct: 127 GANAIARFLKSNEV--ITELVLVDNNFPVAGAKALASALRVNT----------ALTNLVL 174

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
             N +  EGAK LA+  +  + L  +E+ +NGI   G  AL+     NK L  L+L +N 
Sbjct: 175 WDNNIGAEGAKALASALRINEVLTLLELGRNGIGDEGAKALASTLRVNKVLTELDLTNNG 234

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
           IT  GA  L  AL    SL  L L +  + + GA ++A  L
Sbjct: 235 ITNTGAEALASALRVNGSLKSLWLPNNRIGNEGAVALASAL 275



 Score = 38.1 bits (87), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 15/122 (12%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L+L  N  G  G + LA  LR +    L EL L NNG+  TG + L+ AL       
Sbjct: 197 LTLLELGRNGIGDEGAKALASTLRVNKV--LTELDLTNNGITNTGAEALASAL------- 247

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFK---KLKTLERVEMPQNGIYHVGITALSD 343
           +  GS   LK      NR+ NEGA  LA+  +   +       E P+  +   G+T L  
Sbjct: 248 RVNGS---LKSLWLPNNRIGNEGAVALASALRVEIRFLYPPASEKPRISVSEGGLTKLDL 304

Query: 344 AF 345
            F
Sbjct: 305 RF 306


>gi|345793929|ref|XP_544412.3| PREDICTED: nucleotide-binding oligomerization domain-containing
            protein 2 [Canis lupus familiaris]
          Length = 1092

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 28/250 (11%)

Query: 226  RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG-CKLLSKALHDCYE 284
            R V L L  N+ G IGVE L   L  S C AL    L +N +   G CKL+  ALH C +
Sbjct: 843  RPVALQLDHNSVGDIGVEQLLPCL--SVCKAL---YLRDNNISDRGICKLIEHALH-CEQ 896

Query: 285  SSK--------KEGSPLALKVFIA----------GRNRLENEGAKMLAAVFKKLKTLERV 326
              K         +G   ++   +A          G NR+   GA+ LA   +   +L+ +
Sbjct: 897  LQKLALFNNKLTDGCAHSMARLLACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQFL 956

Query: 327  EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
                N +   G  AL++A  ++++LR L+L  N I   GA  L   L K  +L  L L +
Sbjct: 957  GFWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCLEE 1016

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
              L+  G  S+AK L  N++L+ + L+ N I+  G   L++A++    + ++ +  N F 
Sbjct: 1017 NHLQDEGVCSLAKGLERNSSLKVLKLSNNCITYLGAEGLLQALEKNDTILEVWLRGNTF- 1075

Query: 447  EEGVEEMEKL 456
               +EEME+L
Sbjct: 1076 --SLEEMERL 1083



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 4/150 (2%)

Query: 20   NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
            N I   GI  L +     ++L+ L L +N +T   A  + + L+   +   L LG+  + 
Sbjct: 877  NNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSMARLLACKQNFLALRLGNNRIT 936

Query: 80   SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            +AGA ++A+ L  NT+L+ +    N++  +G   L +A+ +   L+ +++  N  G  G 
Sbjct: 937  AAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGA 996

Query: 140  EEMEKLMKSFGMAAALVLED----DEGECS 165
              +  +++       L LE+    DEG CS
Sbjct: 997  RALALMLEKNVALEELCLEENHLQDEGVCS 1026



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 13/199 (6%)

Query: 260  LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
            LKL   G+G   C  L+  L       +    P+AL++     N + + G + L      
Sbjct: 819  LKLTFCGVGPPECAALAFVL-------RHLRRPVALQL---DHNSVGDIGVEQLLPCLSV 868

Query: 320  LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             K L    +  N I   GI  L +     + L+ L L +N +T   A  + + L+   + 
Sbjct: 869  CKALY---LRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSMARLLACKQNF 925

Query: 380  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
              L LG+  + +AGA ++A+ L  NT+L+ +    N++  +G   L +A+ +   L+ ++
Sbjct: 926  LALRLGNNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLS 985

Query: 440  VSENQFGEEGVEEMEKLMK 458
            +  N  G  G   +  +++
Sbjct: 986  LVGNDIGSVGARALALMLE 1004



 Score = 41.6 bits (96), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 49/102 (48%)

Query: 43   LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
            L L +N IT  GA  L + L    SL  L      +   GA ++A+ L D+ +L  ++L 
Sbjct: 928  LRLGNNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLSLV 987

Query: 103  CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
             N+I   G   L   ++    L+++ + EN   +EGV  + K
Sbjct: 988  GNDIGSVGARALALMLEKNVALEELCLEENHLQDEGVCSLAK 1029


>gi|344923498|ref|ZP_08776959.1| hypothetical protein COdytL_02475 [Candidatus Odyssella
           thessalonicensis L13]
          Length = 576

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 12/190 (6%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  L L  N  G  GV  +A++L ++   +L  L L +N +   G + L  AL      
Sbjct: 289 KLTSLTLKTNKLGDSGVMAIAEMLTTN--HSLVSLTLEHNEISPQGVEALVTAL-----V 341

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
           + K  + L L      RN++ N+GA+ LA + +   T++ +E+ + G+   GI ++S + 
Sbjct: 342 TNKHLTLLDL-----SRNKINNQGAEALAMLIQNNATIKALELGRCGLTGEGIMSISASL 396

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
             N +L  LNLN N+I YKGA  L QA+   P L  L L    +   G   IA  +  N+
Sbjct: 397 RSNSSLTKLNLNHNSIGYKGASGLAQAIQLSPPLQELKLMFTEIGEDGLQEIAAAVAINS 456

Query: 406 TLEDVNLTCN 415
            L  ++L  N
Sbjct: 457 KLTSLDLAFN 466



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 76/151 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N+L + G   +A +     +L  + +  N I   G+ AL  A   NK+L  L+L+ N I 
Sbjct: 298 NKLGDSGVMAIAEMLTTNHSLVSLTLEHNEISPQGVEALVTALVTNKHLTLLDLSRNKIN 357

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA  L   +    ++  L LG C L   G  SI+  L  N++L  +NL  N I  +G 
Sbjct: 358 NQGAEALAMLIQNNATIKALELGRCGLTGEGIMSISASLRSNSSLTKLNLNHNSIGYKGA 417

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             L +A++    L+++ +   + GE+G++E+
Sbjct: 418 SGLAQAIQLSPPLQELKLMFTEIGEDGLQEI 448



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 7/133 (5%)

Query: 11  TLEHVEM-PQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           TLEH E+ PQ      G+ AL  A   NK L  L+L+ N I  +GA  L   +    ++ 
Sbjct: 322 TLEHNEISPQ------GVEALVTALVTNKHLTLLDLSRNKINNQGAEALAMLIQNNATIK 375

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L LG C L   G  SI+  L  N++L  +NL  N I  +G   L +A++    L+++ +
Sbjct: 376 ALELGRCGLTGEGIMSISASLRSNSSLTKLNLNHNSIGYKGASGLAQAIQLSPPLQELKL 435

Query: 130 SENQFGEEGVEEM 142
              + GE+G++E+
Sbjct: 436 MFTEIGEDGLQEI 448



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 17/190 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA + +   T++ +E+ + G+   GI ++S +   N  L  LNLN N+I YKGA  L QA
Sbjct: 364 LAMLIQNNATIKALELGRCGLTGEGIMSISASLRSNSSLTKLNLNHNSIGYKGASGLAQA 423

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +   P L  L L    +   G   IA  +  N+ L  ++L  N    +        +   
Sbjct: 424 IQLSPPLQELKLMFTEIGEDGLQEIAAAVAINSKLTSLDLAFNNSEDRSITAFTNTISTN 483

Query: 122 TKLKQINV-SENQFGE-----EGVEEMEKLMK------SFGMAAALVLEDDEGE----CS 165
             L  +N+ S N+F +     E ++ +   +K      S G++ +  LE+ EGE      
Sbjct: 484 KTLTHLNLRSLNRFSDAKVYLEAIKVLANAIKVNTSLLSLGISTSW-LENLEGEKILVSI 542

Query: 166 DEEQDEESEE 175
            +E D  SE+
Sbjct: 543 SQEIDHRSEQ 552



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 12/142 (8%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLG-QALSKLPSLAILN--LGDCLLKSAG 82
            +  LS     ++KLR L +    I +     +   A  KL SL +    LGD     +G
Sbjct: 250 ALCVLSGKISTHEKLRSLRIFRTPINFNAPNNINVAAFQKLTSLTLKTNKLGD-----SG 304

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
             +IA+ LT N +L  + L  NEIS QG   LV A+     L  +++S N+   +G E +
Sbjct: 305 VMAIAEMLTTNHSLVSLTLEHNEISPQGVEALVTALVTNKHLTLLDLSRNKINNQGAEAL 364

Query: 143 EKLMKSFGMAAALVLEDDEGEC 164
             L+++     AL L    G C
Sbjct: 365 AMLIQNNATIKALEL----GRC 382



 Score = 41.6 bits (96), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 8/135 (5%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLG-QALSKLPSLAILN--LGDCLLKSAG 393
            +  LS     ++ LR L +    I +     +   A  KL SL +    LGD     +G
Sbjct: 250 ALCVLSGKISTHEKLRSLRIFRTPINFNAPNNINVAAFQKLTSLTLKTNKLGD-----SG 304

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
             +IA+ LT N +L  + L  NEIS QG   LV A+     L  +++S N+   +G E +
Sbjct: 305 VMAIAEMLTTNHSLVSLTLEHNEISPQGVEALVTALVTNKHLTLLDLSRNKINNQGAEAL 364

Query: 454 EKLMKSFGMAAALVL 468
             L+++     AL L
Sbjct: 365 AMLIQNNATIKALEL 379


>gi|344299117|ref|XP_003421234.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like
           isoform 2 [Loxodonta africana]
          Length = 981

 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 15/246 (6%)

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
           S  SH A +        +H+        L +  +LVELDLS+N  G  GV+ L       
Sbjct: 711 SPCSHAACSYRLGRCGLTHDCCLGISSVLCSNQKLVELDLSNNTLGDSGVKHL------- 763

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
            C  L  L  N   L +  C L S     C + +    +  +L     G N L + G  +
Sbjct: 764 -CVGLRHLFCNLQKLWLVSCCLTSDC---CPDLASVLTTNQSLTRLYMGENALGDAGVGI 819

Query: 313 LAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
           L    K  +  L+++ +  +G+  +   ALS A   N NL HL L DN +  KG   L +
Sbjct: 820 LCEKAKHPQCKLQKLGLVNSGLTSLCCPALSLALSTNPNLTHLYLRDNALGDKGIKILCE 879

Query: 372 ALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
            L   P+  L +L L +C L S     ++  LT N +L++++L  N++   G + L + +
Sbjct: 880 GLMN-PNCKLQMLELDNCSLTSHCCWDLSTLLTSNQSLQELSLGSNDLGDLGVILLCEVL 938

Query: 430 KNKTKL 435
           K ++ L
Sbjct: 939 KQQSCL 944



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 3/115 (2%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LA 69
           L+ + +  +G+  +   ALS A   N  L HL L DN +  KG   L + L   P+  L 
Sbjct: 831 LQKLGLVNSGLTSLCCPALSLALSTNPNLTHLYLRDNALGDKGIKILCEGLMN-PNCKLQ 889

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
           +L L +C L S     ++  LT N +L++++L  N++   G + L + +K ++ L
Sbjct: 890 MLELDNCSLTSHCCWDLSTLLTSNQSLQELSLGSNDLGDLGVILLCEVLKQQSCL 944


>gi|320165823|gb|EFW42722.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 465

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 12/229 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDL+    G  G   +A+ L+ +    L  L L  N +G  G + +++AL        K 
Sbjct: 24  LDLNQEQIGDAGARAIAEALKVNKT--LTSLNLGWNQIGSDGAQEIAEAL--------KV 73

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
            + L  K+++   N + N GA  +A   K  +TL  + +    I   G  A+++A   N 
Sbjct: 74  NTTLT-KLYLES-NEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNT 131

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L  L+L  N I   GA    +AL    +L+ L L    +  AGA +IA+ L  NT LE 
Sbjct: 132 KLTLLDLEVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTMLEY 191

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L  N+I+  G   + +A K  T+L+ + +  NQ G+ G + +   +K
Sbjct: 192 LFLEANQITDVGAQAIAEAPKVNTRLEILYLEVNQIGDTGAQAIADALK 240



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 10/203 (4%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           A E L LN   +G  G + +++AL        K  + L L     G N++ ++GA+ +A 
Sbjct: 20  ASESLDLNQEQIGDAGARAIAEALK-----VNKTLTSLNL-----GWNQIGSDGAQEIAE 69

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
             K   TL ++ +  N I + G  A+++A + N+ L  L L D  I   GA  + +AL  
Sbjct: 70  ALKVNTTLTKLYLESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRV 129

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
              L +L+L    +   GA + A+ L  NTTL  + L  N+I   G L + +A++  T L
Sbjct: 130 NTKLTLLDLEVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTML 189

Query: 436 KQINVSENQFGEEGVEEMEKLMK 458
           + + +  NQ  + G + + +  K
Sbjct: 190 EYLFLEANQITDVGAQAIAEAPK 212



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 80/164 (48%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA+ +A   K  KTL  + +  N I   G   +++A + N  L  L L  N I   GA+ 
Sbjct: 35  GARAIAEALKVNKTLTSLNLGWNQIGSDGAQEIAEALKVNTTLTKLYLESNEIANAGALA 94

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +AL    +L  L L D  +  AGA +IA+ L  NT L  ++L  N+I   G     +A
Sbjct: 95  IAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKLTLLDLEVNQIGDTGAQAFAEA 154

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           +K  T L  + + +NQ G+ G   + + ++   M   L LE ++
Sbjct: 155 LKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTMLEYLFLEANQ 198



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 25/285 (8%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           ++ ++   E +++ Q  I   G  A+++A + NK L  LNL  N I   GA  + +AL  
Sbjct: 14  LYDQVNASESLDLNQEQIGDAGARAIAEALKVNKTLTSLNLGWNQIGSDGAQEIAEALKV 73

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
             +L  L L    + +AGA +IA+ L  N TL ++ L    I   G   + +A++  TKL
Sbjct: 74  NTTLTKLYLESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKL 133

Query: 125 KQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGD 184
             +++  NQ G+ G +   + +K     + L+L  ++                     GD
Sbjct: 134 TLLDLEVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQ--------------------IGD 173

Query: 185 NSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVE 243
              L+  ++   +         +NQ  +   Q+   + K   RL  L L  N  G  G +
Sbjct: 174 AGALAIAEALEGNTMLEYLFLEANQITDVGAQAIAEAPKVNTRLEILYLEVNQIGDTGAQ 233

Query: 244 GLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA--LHDCYESS 286
            +AD L+ +    L  L L  N +G  G + + +A  ++D  E S
Sbjct: 234 AIADALKVNTT--LTSLTLQGNCIGNVGVQAIDEARNVNDTIEVS 276



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 77/160 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + +  N I   G   +++A + N  L  L L  N I   GA+ + +A
Sbjct: 39  IAEALKVNKTLTSLNLGWNQIGSDGAQEIAEALKVNTTLTKLYLESNEIANAGALAIAEA 98

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L D  +  AGA +IA+ L  NT L  ++L  N+I   G     +A+K  
Sbjct: 99  LKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKLTLLDLEVNQIGDTGAQAFAEALKVN 158

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
           T L  + + +NQ G+ G   + + ++   M   L LE ++
Sbjct: 159 TTLSWLLLWQNQIGDAGALAIAEALEGNTMLEYLFLEANQ 198



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 3/163 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  +TL  + +    I   G  A+++A   N KL  L+L  N I   GA    +A
Sbjct: 95  IAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKLTLLDLEVNQIGDTGAQAFAEA 154

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+ L L    +  AGA +IA+ L  NT LE + L  N+I+  G   + +A K  
Sbjct: 155 LKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTMLEYLFLEANQITDVGAQAIAEAPKVN 214

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGEC 164
           T+L+ + +  NQ G+ G + +   +K      +L L   +G C
Sbjct: 215 TRLEILYLEVNQIGDTGAQAIADALKVNTTLTSLTL---QGNC 254



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 73/143 (51%)

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           ++ ++   E +++ Q  I   G  A+++A + NK L  LNL  N I   GA  + +AL  
Sbjct: 14  LYDQVNASESLDLNQEQIGDAGARAIAEALKVNKTLTSLNLGWNQIGSDGAQEIAEALKV 73

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
             +L  L L    + +AGA +IA+ L  N TL ++ L    I   G   + +A++  TKL
Sbjct: 74  NTTLTKLYLESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEALRVNTKL 133

Query: 436 KQINVSENQFGEEGVEEMEKLMK 458
             +++  NQ G+ G +   + +K
Sbjct: 134 TLLDLEVNQIGDTGAQAFAEALK 156



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 12/236 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L+L  N  G  G + +A+ L+ +    L +L L +N +   G   +++AL
Sbjct: 42  ALKVNKTLTSLNLGWNQIGSDGAQEIAEALKVNTT--LTKLYLESNEIANAGALAIAEAL 99

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   +  + L L+       R+   GA+ +A   +    L  +++  N I   G  
Sbjct: 100 K-----VNRTLTELYLR-----DTRIGGAGAQAIAEALRVNTKLTLLDLEVNQIGDTGAQ 149

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A ++A + N  L  L L  N I   GA+ + +AL     L  L L    +   GA +IA+
Sbjct: 150 AFAEALKVNTTLSWLLLWQNQIGDAGALAIAEALEGNTMLEYLFLEANQITDVGAQAIAE 209

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
               NT LE + L  N+I   G   +  A+K  T L  + +  N  G  GV+ +++
Sbjct: 210 APKVNTRLEILYLEVNQIGDTGAQAIADALKVNTTLTSLTLQGNCIGNVGVQAIDE 265



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +  N I + G  A+++A + N+ L  L L D  I   GA  + +A
Sbjct: 67  IAEALKVNTTLTKLYLESNEIANAGALAIAEALKVNRTLTELYLRDTRIGGAGAQAIAEA 126

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L +L+L    +   GA + A+ L  NTTL  + L  N+I   G L + +A++  
Sbjct: 127 LRVNTKLTLLDLEVNQIGDTGAQAFAEALKVNTTLSWLLLWQNQIGDAGALAIAEALEGN 186

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L+ + +  NQ  + G + + +  K
Sbjct: 187 TMLEYLFLEANQITDVGAQAIAEAPK 212



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 31/265 (11%)

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
           E ++L   +I   G   + +A+K    L  +N+  NQ G +G +E+ + +K       L 
Sbjct: 22  ESLDLNQEQIGDAGARAIAEALKVNKTLTSLNLGWNQIGSDGAQEIAEALKVNTTLTKLY 81

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
           LE +E   +      E+ + N +  E     L   D+     A  Q+   +         
Sbjct: 82  LESNEIANAGALAIAEALKVNRTLTE-----LYLRDTRIG-GAGAQAIAEA--------- 126

Query: 217 SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS 276
               L+   +L  LDL  N  G  G +  A+ L+ +    L  L L  N +G  G   ++
Sbjct: 127 ----LRVNTKLTLLDLEVNQIGDTGAQAFAEALKVNTT--LSWLLLWQNQIGDAGALAIA 180

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
           +AL         EG+ +   +F+   N++ + GA+ +A   K    LE + +  N I   
Sbjct: 181 EAL---------EGNTMLEYLFLEA-NQITDVGAQAIAEAPKVNTRLEILYLEVNQIGDT 230

Query: 337 GITALSDAFEENKNLRHLNLNDNTI 361
           G  A++DA + N  L  L L  N I
Sbjct: 231 GAQAIADALKVNTTLTSLTLQGNCI 255


>gi|224060897|ref|XP_002194083.1| PREDICTED: leucine-rich repeat-containing protein 34 [Taeniopygia
           guttata]
          Length = 385

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 40/265 (15%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L   A +  LDL+ N     G + +A  L+ +    L+ L L  N +G +G +L++ ALH
Sbjct: 72  LGQAAFVTGLDLAYNLLTDAGAKIMATFLQENS--TLQYLNLMFNDIGTSGAELIAGALH 129

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP----------- 329
                     S  +L       N++ N+G    A++ K    LE++++            
Sbjct: 130 ----------SNQSLVHLRMTGNKIGNQGGMFFASMLKNNSALEKLDLGDCDVEETTVHM 179

Query: 330 ----------------QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
                           ++ + + G+  L +A  EN +LR+L+L+ N I   G   LG+ L
Sbjct: 180 ARMLRSNSSLVELHLGKHEMKNFGVERLCEALYENSSLRYLDLSCNNIICDGVEFLGELL 239

Query: 374 SKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
            +  SL IL+LG   ++  GA  +++ L T N TL+ +++  N I+ QG + L +AM + 
Sbjct: 240 RRNRSLEILDLGANRIEDVGAICLSQALATRNRTLQALSVVSNNITGQGLVALAQAMHSN 299

Query: 433 TKLKQINVSENQFGEEGVEEMEKLM 457
             L  I +  N+          +LM
Sbjct: 300 MALSHIYIWGNKIDRSTCVAFSELM 324



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 142/351 (40%), Gaps = 73/351 (20%)

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           L   L +   +  L+L   LL  AGA  +A +L +N+TL+ +NL  N+I   G   +  A
Sbjct: 68  LASVLGQAAFVTGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGAELIAGA 127

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           + +   L  + ++ N+ G +G      ++K+      L    D G+C  EE         
Sbjct: 128 LHSNQSLVHLRMTGNKIGNQGGMFFASMLKNNSALEKL----DLGDCDVEE--------- 174

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
                                              T + + M L++ + LVEL L  +  
Sbjct: 175 ----------------------------------TTVHMARM-LRSNSSLVELHLGKHEM 199

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV 297
              GVE L + L  +   +L  L L+ N +   G + L + L       ++  S   L++
Sbjct: 200 KNFGVERLCEALYENS--SLRYLDLSCNNIICDGVEFLGELL-------RRNRS---LEI 247

Query: 298 FIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
              G NR+E+ GA  L+ A+  + +TL+ + +  N I   G+ AL+ A   N  L H+ +
Sbjct: 248 LDLGANRIEDVGAICLSQALATRNRTLQALSVVSNNITGQGLVALAQAMHSNMALSHIYI 307

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
             N I     +    A S+L ++  L L        G + +A Y  D   L
Sbjct: 308 WGNKIDRSTCV----AFSELMAVGRLEL--------GCTDVAPYEVDGEVL 346



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + +   +L  + + ++ + + G+  L +A  EN  LR+L+L+ N I   G   LG+ 
Sbjct: 179 MARMLRSNSSLVELHLGKHEMKNFGVERLCEALYENSSLRYLDLSCNNIICDGVEFLGEL 238

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L +  SL IL+LG   ++  GA  +++ L T N TL+ +++  N I+ QG + L +AM +
Sbjct: 239 LRRNRSLEILDLGANRIEDVGAICLSQALATRNRTLQALSVVSNNITGQGLVALAQAMHS 298

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLM 146
              L  I +  N+          +LM
Sbjct: 299 NMALSHIYIWGNKIDRSTCVAFSELM 324



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 5/173 (2%)

Query: 290 GSPLALKVFIAG----RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
            S L    F+ G     N L + GAK++A   ++  TL+ + +  N I   G   ++ A 
Sbjct: 69  ASVLGQAAFVTGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGAELIAGAL 128

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
             N++L HL +  N I  +G +     L    +L  L+LGDC ++      +A+ L  N+
Sbjct: 129 HSNQSLVHLRMTGNKIGNQGGMFFASMLKNNSALEKLDLGDCDVEETTV-HMARMLRSNS 187

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +L +++L  +E+   G   L +A+   + L+ +++S N    +GVE + +L++
Sbjct: 188 SLVELHLGKHEMKNFGVERLCEALYENSSLRYLDLSCNNIICDGVEFLGELLR 240



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 27/165 (16%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A   ++  TL+++ +  N I   G   ++ A   N+ L HL +  N I  +G +    
Sbjct: 95  IMATFLQENSTLQYLNLMFNDIGTSGAELIAGALHSNQSLVHLRMTGNKIGNQGGMFFAS 154

Query: 61  ALSKLPSLAILNLGDC---------------------------LLKSAGASSIAKYLTDN 93
            L    +L  L+LGDC                            +K+ G   + + L +N
Sbjct: 155 MLKNNSALEKLDLGDCDVEETTVHMARMLRSNSSLVELHLGKHEMKNFGVERLCEALYEN 214

Query: 94  TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           ++L  ++L+CN I   G   L + ++    L+ +++  N+  + G
Sbjct: 215 SSLRYLDLSCNNIICDGVEFLGELLRRNRSLEILDLGANRIEDVG 259



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           L   L +   +  L+L   LL  AGA  +A +L +N+TL+ +NL  N+I   G   +  A
Sbjct: 68  LASVLGQAAFVTGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDIGTSGAELIAGA 127

Query: 429 MKNKTKLKQINVSENQFGEEG 449
           + +   L  + ++ N+ G +G
Sbjct: 128 LHSNQSLVHLRMTGNKIGNQG 148



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 29/156 (18%)

Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
           R+ ++   +LA+V  +   +  +++  N +   G   ++   +EN  L++LNL  N I  
Sbjct: 59  RVTDDDLGVLASVLGQAAFVTGLDLAYNLLTDAGAKIMATFLQENSTLQYLNLMFNDI-- 116

Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
                                      ++GA  IA  L  N +L  + +T N+I  QGG+
Sbjct: 117 --------------------------GTSGAELIAGALHSNQSLVHLRMTGNKIGNQGGM 150

Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
                +KN + L+++++ +    EE    M ++++S
Sbjct: 151 FFASMLKNNSALEKLDLGDCDV-EETTVHMARMLRS 185


>gi|66814688|ref|XP_641523.1| hypothetical protein DDB_G0279741 [Dictyostelium discoideum AX4]
 gi|60469560|gb|EAL67550.1| hypothetical protein DDB_G0279741 [Dictyostelium discoideum AX4]
          Length = 1084

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 1/167 (0%)

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLR 352
            LK  I    ++   G    A   K+ K  LE + +    +   G T + +A   N +L 
Sbjct: 589 TLKKLILSHTKMSCAGIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLT 648

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
           HL LN N+I   GA  +G+AL    +L +L+LG   +   G  SI+K L  N TL ++++
Sbjct: 649 HLYLNSNSILSSGAKSIGKALKHNSTLKVLHLGYNEIGVKGLDSISKSLKTNKTLIELSV 708

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             N I  +GG+ L  ++K+  KL+ IN+  N  G +G   + KL+ +
Sbjct: 709 KNNLIPEKGGIVLTDSLKSNQKLETINLRGNFLGIKGGAAISKLLTT 755



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 68/123 (55%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G T + +A   N  L HL LN N+I   GA  +G+AL    +L +L+LG   +   G  S
Sbjct: 633 GATEIGEAIRSNTHLTHLYLNSNSILSSGAKSIGKALKHNSTLKVLHLGYNEIGVKGLDS 692

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           I+K L  N TL ++++  N I  +GG+ L  ++K+  KL+ IN+  N  G +G   + KL
Sbjct: 693 ISKSLKTNKTLIELSVKNNLIPEKGGIVLTDSLKSNQKLETINLRGNFLGIKGGAAISKL 752

Query: 146 MKS 148
           + +
Sbjct: 753 LTT 755



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 1/114 (0%)

Query: 26  GITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           GI   +   +ENK +L  LNL+D  +  KGA  +G+A+     L  L L    + S+GA 
Sbjct: 604 GIVEFAQGLKENKIQLESLNLDDTDLQDKGATEIGEAIRSNTHLTHLYLNSNSILSSGAK 663

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           SI K L  N+TL+ ++L  NEI V+G   + K++K    L +++V  N   E+G
Sbjct: 664 SIGKALKHNSTLKVLHLGYNEIGVKGLDSISKSLKTNKTLIELSVKNNLIPEKG 717



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 16/151 (10%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           +L  L+L D      G   + + +RS+    L  L LN+N +  +G K + KAL      
Sbjct: 618 QLESLNLDDTDLQDKGATEIGEAIRSNT--HLTHLYLNSNSILSSGAKSIGKAL------ 669

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
             K  S   LKV   G N +  +G   ++   K  KTL  + +  N I   G   L+D+ 
Sbjct: 670 --KHNS--TLKVLHLGYNEIGVKGLDSISKSLKTNKTLIELSVKNNLIPEKGGIVLTDSL 725

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
           + N+ L  +NL  N +  KG    G A+SKL
Sbjct: 726 KSNQKLETINLRGNFLGIKG----GAAISKL 752



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +    K   TL+ + +  N I   G+ ++S + + NK L  L++ +N I  KG I L  +
Sbjct: 665 IGKALKHNSTLKVLHLGYNEIGVKGLDSISKSLKTNKTLIELSVKNNLIPEKGGIVLTDS 724

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 106
           L     L  +NL    L   G ++I+K LT N TL +++L+ N +
Sbjct: 725 LKSNQKLETINLRGNFLGIKGGAAISKLLTTNQTLTNMDLSHNNL 769


>gi|407849923|gb|EKG04494.1| hypothetical protein TCSYLVIO_004444 [Trypanosoma cruzi]
          Length = 738

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 162/425 (38%), Gaps = 90/425 (21%)

Query: 55  AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
           A  +   LS      IL+L    L+  GA SIAK +  N T+  V L  N+I   GG+ L
Sbjct: 151 AEAIAHILSNNRKYTILDLSGNRLRDEGACSIAKLIRINRTIVHVGLRSNDIGHIGGVAL 210

Query: 115 VKAMKNKTKLKQIN------VSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEE 168
            +A+     +  ++      ++ N    EG E +  ++++                    
Sbjct: 211 ARALLENNTVVSLDLGAHSGINGNHIATEGAEAIGVMLRA-------------------- 250

Query: 169 QDEESEEENDSDAEGDNSNLSH-NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARL 227
                           N  LSH N S++    S  S        N S            +
Sbjct: 251 ----------------NKVLSHLNLSSNGLGVSGVSFIVGGLDGNCS------------V 282

Query: 228 VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSK 287
             LD+S N  G  G++ LA +L ++C   +  L L  N +G  G  +L KA+ +  E  +
Sbjct: 283 KHLDISVNNLGYAGIKALAPVLETTC---ITHLSLQRNSMGDNGGMVLFKAIAEAIEDGE 339

Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG--------------- 332
            +   L L+V     N L  + AK +  V      L+ + +  N                
Sbjct: 340 DKLEYLNLEV-----NELGEKTAKAMQRVLSSSTALKTLRLSYNSFGGASKYIMEGLAEN 394

Query: 333 ------------IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
                       I      A+  A   N  L+HL+L++N +   G+  + +A+     L 
Sbjct: 395 KYLRSLFLSFCEIREADGAAVGAALTANSTLQHLDLSNNKLKDAGSKCIAEAMKTNKGLI 454

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
            LNL    +   G  +IA +LT N TL ++NL  N +S   G  L   ++    L+++NV
Sbjct: 455 SLNLSCNKIADGGGKAIALFLTSNRTLRELNLRRNCMSNATGELLDDQLRGNMTLEKMNV 514

Query: 441 SENQF 445
             N F
Sbjct: 515 GFNDF 519



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 40/196 (20%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL------ 356
           NRL +EGA  +A + +  +T+  V +  N I H+G  AL+ A  EN  +  L+L      
Sbjct: 172 NRLRDEGACSIAKLIRINRTIVHVGLRSNDIGHIGGVALARALLENNTVVSLDLGAHSGI 231

Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNL------------------GDCLLK-------- 390
           N N I  +GA  +G  L     L+ LNL                  G+C +K        
Sbjct: 232 NGNHIATEGAEAIGVMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNCSVKHLDISVNN 291

Query: 391 --SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-----NKTKLKQINVSEN 443
              AG  ++A  L + T +  ++L  N +   GG+ L KA+       + KL+ +N+  N
Sbjct: 292 LGYAGIKALAPVL-ETTCITHLSLQRNSMGDNGGMVLFKAIAEAIEDGEDKLEYLNLEVN 350

Query: 444 QFGEEGVEEMEKLMKS 459
           + GE+  + M++++ S
Sbjct: 351 ELGEKTAKAMQRVLSS 366



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LDLS N     G   +A L+R +       + L +N +G  G   L++AL    E++   
Sbjct: 167 LDLSGNRLRDEGACSIAKLIRINRTIV--HVGLRSNDIGHIGGVALARAL---LENNTVV 221

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
              L     I G N +  EGA+ +  + +  K L  + +  NG+   G++ +    + N 
Sbjct: 222 SLDLGAHSGING-NHIATEGAEAIGVMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNC 280

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLP----SLAILNLGD----CLLKSAGASSIAKYL 401
           +++HL+++ N + Y G   L   L        SL   ++GD     L K+     IA+ +
Sbjct: 281 SVKHLDISVNNLGYAGIKALAPVLETTCITHLSLQRNSMGDNGGMVLFKA-----IAEAI 335

Query: 402 TDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
            D    LE +NL  NE+  +    + + + + T LK + +S N FG
Sbjct: 336 EDGEDKLEYLNLEVNELGEKTAKAMQRVLSSSTALKTLRLSYNSFG 381



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 157/397 (39%), Gaps = 84/397 (21%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNL------NDNTITYKGA 55
           +A + +  +T+ HV +  N I H+G  AL+ A  EN  +  L+L      N N I  +GA
Sbjct: 182 IAKLIRINRTIVHVGLRSNDIGHIGGVALARALLENNTVVSLDLGAHSGINGNHIATEGA 241

Query: 56  IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
             +G  L     L+ LNL    L  +G S I   L  N +++ ++++ N +   G   L 
Sbjct: 242 EAIGVMLRANKVLSHLNLSSNGLGVSGVSFIVGGLDGNCSVKHLDISVNNLGYAGIKALA 301

Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEE 175
             ++  T +  +++  N  G+ G   + K       A A  +ED  GE   E  + E  E
Sbjct: 302 PVLET-TCITHLSLQRNSMGDNGGMVLFK-------AIAEAIED--GEDKLEYLNLEVNE 351

Query: 176 ENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDN 235
             +  A+     LS                           S  +LKT      L LS N
Sbjct: 352 LGEKTAKAMQRVLS---------------------------SSTALKT------LRLSYN 378

Query: 236 AFGPIG---VEGLAD--LLRS---SCC-----------------FALEELKLNNNGLGIT 270
           +FG      +EGLA+   LRS   S C                   L+ L L+NN L   
Sbjct: 379 SFGGASKYIMEGLAENKYLRSLFLSFCEIREADGAAVGAALTANSTLQHLDLSNNKLKDA 438

Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
           G K +++A+       K     ++L +     N++ + G K +A      +TL  + + +
Sbjct: 439 GSKCIAEAM-------KTNKGLISLNLSC---NKIADGGGKAIALFLTSNRTLRELNLRR 488

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           N + +     L D    N  L  +N+  N   YK  I
Sbjct: 489 NCMSNATGELLDDQLRGNMTLEKMNVGFNDFRYKSLI 525


>gi|320170600|gb|EFW47499.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 397

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 87/168 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GA+ +A   K  KTL  + + QN I   G  A+++A + N  L+ L L +N I 
Sbjct: 48  NQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQAIAEALKVNTTLKDLFLAENQIG 107

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             G I + +AL    +L+ L L D  +  AGA +IA+ L  N TL  ++L  N+I   G 
Sbjct: 108 DAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAEALKVNMTLTHLDLHRNQIGDAGA 167

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
             + +A+K  T L  +++  N  G  G++ + +  +       L+++D
Sbjct: 168 QAIAEALKVNTTLTYVSLRFNCIGNAGLQAIGEARQVNRTLTRLIIDD 215



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA+ +A   K   T+  + +  N I  VG  A+++A + NK L  L L+ N I   GA  
Sbjct: 26  GAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQA 85

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           + +AL    +L  L L +  +  AG  +IA+ L  N TL  + L  N+I   G   + +A
Sbjct: 86  IAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAEA 145

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +K    L  +++  NQ G+ G + + + +K
Sbjct: 146 LKVNMTLTHLDLHRNQIGDAGAQAIAEALK 175



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 80/158 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  KTL  + + QN I   G  A+++A + N  L+ L L +N I   G I + +A
Sbjct: 58  IAEALKVNKTLTELYLHQNQIGVAGAQAIAEALKVNTTLKDLFLAENQIGDAGTIAIAEA 117

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+ L L D  +  AGA +IA+ L  N TL  ++L  N+I   G   + +A+K  
Sbjct: 118 LKVNKTLSWLGLIDNQIGDAGAQAIAEALKVNMTLTHLDLHRNQIGDAGAQAIAEALKVN 177

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 159
           T L  +++  N  G  G++ + +  +       L+++D
Sbjct: 178 TTLTYVSLRFNCIGNAGLQAIGEARQVNRTLTRLIIDD 215



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  + +  N I  VG  A+++A + NK L  L L+ N I   GA  + +A
Sbjct: 30  IAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQAIAEA 89

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L +  +  AG  +IA+ L  N TL  + L  N+I   G   + +A+K  
Sbjct: 90  LKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAEALKVN 149

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             L  +++  NQ G+ G + + + +K
Sbjct: 150 MTLTHLDLHRNQIGDAGAQAIAEALK 175



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV------FIAGRNRLENEGAK 311
           E LK+N     +TG  L +  + D    +  E    ALKV          +N++   GA+
Sbjct: 32  EALKVNTT---VTGIYLWANQIGDVGAQAIAE----ALKVNKTLTELYLHQNQIGVAGAQ 84

Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            +A   K   TL+ + + +N I   G  A+++A + NK L  L L DN I   GA  + +
Sbjct: 85  AIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAE 144

Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
           AL    +L  L+L    +  AGA +IA+ L  NTTL  V+L  N I
Sbjct: 145 ALKVNMTLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCI 190



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 12/188 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    +  + L  N  G +G + +A+ L+ +    L EL L+ N +G+ G + +++AL
Sbjct: 33  ALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKT--LTELYLHQNQIGVAGAQAIAEAL 90

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                          LK      N++ + G   +A   K  KTL  + +  N I   G  
Sbjct: 91  K----------VNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQ 140

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + N  L HL+L+ N I   GA  + +AL    +L  ++L    + +AG  +I +
Sbjct: 141 AIAEALKVNMTLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCIGNAGLQAIGE 200

Query: 400 YLTDNTTL 407
               N TL
Sbjct: 201 ARQVNRTL 208



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 65/123 (52%)

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
           VG  A+++A + N  +  + L  N I   GA  + +AL    +L  L L    +  AGA 
Sbjct: 25  VGAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQ 84

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           +IA+ L  NTTL+D+ L  N+I   G + + +A+K    L  + + +NQ G+ G + + +
Sbjct: 85  AIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAE 144

Query: 456 LMK 458
            +K
Sbjct: 145 ALK 147



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 65/123 (52%)

Query: 25  VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           VG  A+++A + N  +  + L  N I   GA  + +AL    +L  L L    +  AGA 
Sbjct: 25  VGAQAIAEALKVNTTVTGIYLWANQIGDVGAQAIAEALKVNKTLTELYLHQNQIGVAGAQ 84

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           +IA+ L  NTTL+D+ L  N+I   G + + +A+K    L  + + +NQ G+ G + + +
Sbjct: 85  AIAEALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKTLSWLGLIDNQIGDAGAQAIAE 144

Query: 145 LMK 147
            +K
Sbjct: 145 ALK 147



 Score = 38.5 bits (88), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 12/139 (8%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L +L L++N  G  G   +A+ L+ +    L  L L +N +G  G + +++AL
Sbjct: 89  ALKVNTTLKDLFLAENQIGDAGTIAIAEALKVNKT--LSWLGLIDNQIGDAGAQAIAEAL 146

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                        + L      RN++ + GA+ +A   K   TL  V +  N I + G+ 
Sbjct: 147 K----------VNMTLTHLDLHRNQIGDAGAQAIAEALKVNTTLTYVSLRFNCIGNAGLQ 196

Query: 340 ALSDAFEENKNLRHLNLND 358
           A+ +A + N+ L  L ++D
Sbjct: 197 AIGEARQVNRTLTRLIIDD 215


>gi|443712324|gb|ELU05701.1| hypothetical protein CAPTEDRAFT_84230, partial [Capitella teleta]
          Length = 291

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 12/232 (5%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           LV+LD+  N  G  G   LA  LR     +L  L + + GL  +GC +L + L       
Sbjct: 55  LVKLDIRLNTIGDEGARHLARGLRRH--LSLLSLNVTSTGLTGSGCSILMQGL------- 105

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
              G   +L     G N ++ EG K +A       TL ++ M  NG+   G T +  +  
Sbjct: 106 ---GRNQSLIQLDIGFNEIDEEGCKAIAEALGSNCTLRKLRMRANGVRSYGATCIFRSLR 162

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
           +N  L  L+++ N IT +  + LG  L    +L  LNL  C + S G +++++ L  NTT
Sbjct: 163 KNSRLTLLDISSNRITSESVLILGDVLRFNRTLRELNLEKCEVSSEGCAALSRALKTNTT 222

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L++++L+ N I   G   L + +K    +  ++++    G  G   + + M+
Sbjct: 223 LKNLDLSLNPIGDDGVEALAEGLKYNQVMDVLSLNMCDIGNRGFLVLLEAMR 274



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 72/138 (52%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++L  +++  N I   G  A+++A   N  LR L +  N +   GA  + ++L K   L 
Sbjct: 109 QSLIQLDIGFNEIDEEGCKAIAEALGSNCTLRKLRMRANGVRSYGATCIFRSLRKNSRLT 168

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           +L++    + S     +   L  N TL ++NL   E+S +G   L +A+K  T LK +++
Sbjct: 169 LLDISSNRITSESVLILGDVLRFNRTLRELNLEKCEVSSEGCAALSRALKTNTTLKNLDL 228

Query: 130 SENQFGEEGVEEMEKLMK 147
           S N  G++GVE + + +K
Sbjct: 229 SLNPIGDDGVEALAEGLK 246



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 70/137 (51%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL  + M  NG+   G T +  +  +N +L  L+++ N IT +  + LG  L    +L  
Sbjct: 138 TLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDISSNRITSESVLILGDVLRFNRTLRE 197

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNL  C + S G +++++ L  NTTL++++L+ N I   G   L + +K    +  ++++
Sbjct: 198 LNLEKCEVSSEGCAALSRALKTNTTLKNLDLSLNPIGDDGVEALAEGLKYNQVMDVLSLN 257

Query: 131 ENQFGEEGVEEMEKLMK 147
               G  G   + + M+
Sbjct: 258 MCDIGNRGFLVLLEAMR 274



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 12/193 (6%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L++LD+  N     G + +A+ L S+C   L +L++  NG+   G          C   S
Sbjct: 111 LIQLDIGFNEIDEEGCKAIAEALGSNC--TLRKLRMRANGVRSYG--------ATCIFRS 160

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
            ++ S L L       NR+ +E   +L  V +  +TL  + + +  +   G  ALS A +
Sbjct: 161 LRKNSRLTL--LDISSNRITSESVLILGDVLRFNRTLRELNLEKCEVSSEGCAALSRALK 218

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            N  L++L+L+ N I   G   L + L     + +L+L  C + + G   + + +  N+ 
Sbjct: 219 TNTTLKNLDLSLNPIGDDGVEALAEGLKYNQVMDVLSLNMCDIGNRGFLVLLEAMRFNSA 278

Query: 407 LEDVNLTCNEISV 419
           +  V L  N I V
Sbjct: 279 MTSVKLCYNNIGV 291



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 28/166 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTI----------- 50
           LA + +    ++ + + +N I   G+  L  A E+N+ L  L++  NTI           
Sbjct: 17  LAGLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHLARG 76

Query: 51  -----------------TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 93
                            T  G   L Q L +  SL  L++G   +   G  +IA+ L  N
Sbjct: 77  LRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEIDEEGCKAIAEALGSN 136

Query: 94  TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            TL  + +  N +   G   + ++++  ++L  +++S N+   E V
Sbjct: 137 CTLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDISSNRITSESV 182



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 28/166 (16%)

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI----------- 361
           LA + +    ++ + + +N I   G+  L  A E+N+ L  L++  NTI           
Sbjct: 17  LAGLLENYACVKELSIAKNHIGTPGVVRLGQALEKNRGLVKLDIRLNTIGDEGARHLARG 76

Query: 362 -----------------TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
                            T  G   L Q L +  SL  L++G   +   G  +IA+ L  N
Sbjct: 77  LRRHLSLLSLNVTSTGLTGSGCSILMQGLGRNQSLIQLDIGFNEIDEEGCKAIAEALGSN 136

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            TL  + +  N +   G   + ++++  ++L  +++S N+   E V
Sbjct: 137 CTLRKLRMRANGVRSYGATCIFRSLRKNSRLTLLDISSNRITSESV 182


>gi|25955661|gb|AAH40339.1| NOD1 protein [Homo sapiens]
          Length = 953

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  L LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N I+ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A+++ T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  L+L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVLRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKS 459
             LK + + +NQ   +G  ++   ++S
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQS 922



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 74/144 (51%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
           K + + +NQ   +G  ++   ++S
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQS 922



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  L L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     LR   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFSRLTVLR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|428185622|gb|EKX54474.1| hypothetical protein GUITHDRAFT_150021 [Guillardia theta CCMP2712]
          Length = 233

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 11/183 (6%)

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVF-IAGRNRLENEGAKMLAAVFKKLKTLER 325
           LG  GC+    AL DC    + + + L L+   I GR      GA  +A   KK +++ +
Sbjct: 58  LGAAGCE----ALADCLARPQLQLTTLLLRCCDINGR------GATAIADSLKKNESVTK 107

Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
           +++  N I   G TA++D  + N  LR L++  N I   G   L  AL     L  L+  
Sbjct: 108 LDLNSNQIGDAGATAIADMLQTNVKLRWLDIEGNGIGANGGTALADALRINRGLVSLHAS 167

Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           +  +  AGA+++A+ L  N  LE + L  N IS++ G  LV A+K+ + LK ++++  + 
Sbjct: 168 ENSIADAGAANLARALQVNNKLEILWLDSNNISLKSGEALVAALKSNSTLKTVHLATPRP 227

Query: 446 GEE 448
           G +
Sbjct: 228 GSK 230



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 73/136 (53%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   KK +++  +++  N I   G TA++D  + N KLR L++  N I   G   L  A
Sbjct: 95  IADSLKKNESVTKLDLNSNQIGDAGATAIADMLQTNVKLRWLDIEGNGIGANGGTALADA 154

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+  +  +  AGA+++A+ L  N  LE + L  N IS++ G  LV A+K+ 
Sbjct: 155 LRINRGLVSLHASENSIADAGAANLARALQVNNKLEILWLDSNNISLKSGEALVAALKSN 214

Query: 122 TKLKQINVSENQFGEE 137
           + LK ++++  + G +
Sbjct: 215 STLKTVHLATPRPGSK 230



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%)

Query: 50  ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 109
           I  +GA  +  +L K  S+  L+L    +  AGA++IA  L  N  L  +++  N I   
Sbjct: 87  INGRGATAIADSLKKNESVTKLDLNSNQIGDAGATAIADMLQTNVKLRWLDIEGNGIGAN 146

Query: 110 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           GG  L  A++    L  ++ SEN   + G   + + ++
Sbjct: 147 GGTALADALRINRGLVSLHASENSIADAGAANLARALQ 184



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%)

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I  +GA  +  +L K  S+  L+L    +  AGA++IA  L  N  L  +++  N I   
Sbjct: 87  INGRGATAIADSLKKNESVTKLDLNSNQIGDAGATAIADMLQTNVKLRWLDIEGNGIGAN 146

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           GG  L  A++    L  ++ SEN   + G   + + ++
Sbjct: 147 GGTALADALRINRGLVSLHASENSIADAGAANLARALQ 184


>gi|399497960|emb|CCG20308.1| Ran GTPase activating protein 2 [Solanum gourlayi]
          Length = 553

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|399497920|emb|CCG20288.1| Ran GTPase activating protein 2 [Solanum berthaultii]
          Length = 553

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|20467211|gb|AAM22459.1| CARD15-like protein [Homo sapiens]
          Length = 223

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 12/212 (5%)

Query: 232 LSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGS 291
           L  N+ GP G + LAD L+      L  L L  N +   G + +++AL     +S +  S
Sbjct: 1   LRGNSIGPQGAKALADALK--INRTLTSLSLQGNTVRDDGARSMAEAL-----ASNRTLS 53

Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
            L L+     +N +   GA+ +A   K+ ++L+ +    N I   G  AL++A + N+ L
Sbjct: 54  MLHLQ-----KNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGL 108

Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
             L+L  N+I+  G   L  AL    +L  L+L +  +   GA +IA  L  N+TL++++
Sbjct: 109 ESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLD 168

Query: 412 LTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           LT N +  QG   +  A++    L  +++  N
Sbjct: 169 LTANLLHDQGARAIAVAVRENRTLTSLHLQWN 200



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 12/198 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L L  N     G   +A+ L S+   ++  L L  N +G  G + ++ AL
Sbjct: 17  ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSM--LHLQKNSIGPMGAQRMADAL 74

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                         +LK  +   N + + GAK LA   K  + LE +++  N I   G+ 
Sbjct: 75  KQNR----------SLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVA 124

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL  A   N+ L  L+L +N+I+ +GA  +  AL    +L  L+L   LL   GA +IA 
Sbjct: 125 ALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAV 184

Query: 400 YLTDNTTLEDVNLTCNEI 417
            + +N TL  ++L  N I
Sbjct: 185 AVRENRTLTSLHLQWNFI 202



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 10/192 (5%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
           L  N +G  G K L+ AL        +  + L+L+      N + ++GA+ +A      +
Sbjct: 1   LRGNSIGPQGAKALADALK-----INRTLTSLSLQ-----GNTVRDDGARSMAEALASNR 50

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           TL  + + +N I  +G   ++DA ++N++L+ L  + N+I   GA  L +AL     L  
Sbjct: 51  TLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLES 110

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L    +  AG +++   L  N TL  ++L  N IS +G   +  A+   + LK ++++
Sbjct: 111 LDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLT 170

Query: 442 ENQFGEEGVEEM 453
            N   ++G   +
Sbjct: 171 ANLLHDQGARAI 182



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 68/133 (51%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +TL  + + +N I  +G   ++DA ++N+ L+ L  + N+I   GA  L +AL     L 
Sbjct: 50  RTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLE 109

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L    +  AG +++   L  N TL  ++L  N IS +G   +  A+   + LK +++
Sbjct: 110 SLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDL 169

Query: 130 SENQFGEEGVEEM 142
           + N   ++G   +
Sbjct: 170 TANLLHDQGARAI 182



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  AL+DA + N+ L  L+L  NT+   GA  + +AL+   +L++L+L    + 
Sbjct: 4   NSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIG 63

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
             GA  +A  L  N +L+++  + N I   G   L +A+K    L+ +++  N   + GV
Sbjct: 64  PMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGV 123

Query: 140 EEM 142
             +
Sbjct: 124 AAL 126



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+ ++L+ +    N I   G  AL++A + N+ L  L+L  N+I+  G   L  A
Sbjct: 70  MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 129

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L +  +   GA +IA  L  N+TL++++LT N +  QG   +  A++  
Sbjct: 130 LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVREN 189

Query: 122 TKLKQINVSEN 132
             L  +++  N
Sbjct: 190 RTLTSLHLQWN 200



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 66/141 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +TL  + +  N +   G  ++++A   N+ L  L+L  N+I   GA  +  A
Sbjct: 14  LADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADA 73

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL  L      +   GA ++A+ L  N  LE ++L  N IS  G   L+ A+   
Sbjct: 74  LKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTN 133

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             L  +++ EN    EG + +
Sbjct: 134 QTLLSLSLRENSISPEGAQAI 154



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  + LE +++  N I   G+ AL  A   N+ L  L+L +N+I+ +GA  +  A
Sbjct: 98  LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 157

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 106
           L    +L  L+L   LL   GA +IA  + +N TL  ++L  N I
Sbjct: 158 LCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFI 202



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%)

Query: 45  LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 104
           L  N+I  +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 105 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            I   G   +  A+K    LK++  S N  G+ G + + + +K
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALK 103



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%)

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L  N+I  +GA  L  AL    +L  L+L    ++  GA S+A+ L  N TL  ++L  N
Sbjct: 1   LRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKN 60

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            I   G   +  A+K    LK++  S N  G+ G + + + +K
Sbjct: 61  SIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALK 103


>gi|428169593|gb|EKX38525.1| hypothetical protein GUITHDRAFT_45387, partial [Guillardia theta
           CCMP2712]
          Length = 175

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 14/167 (8%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDC--YESSKKEGSPLALKVFIAGRNRLENEGAKMLA 314
           L+ L ++ NG+G  GC  +  AL +    E    +G            N L+ EGAK +A
Sbjct: 21  LQSLDVSENGIGAVGCSKIVWALTELEHVEFLNLQG------------NDLQAEGAKRIA 68

Query: 315 AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
               KL++L+ +++  N I   GI  LS      + L  L+L DNT+  +GA  +   + 
Sbjct: 69  GALPKLESLQAIDLRSNSIGPDGIEKLSACLARCRCLTSLHLGDNTLLAEGAKHIASMIP 128

Query: 375 KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
           K P L  LNL    L   G + IA  L   T L  ++L  NEIS  G
Sbjct: 129 KCPMLKSLNLCKNALLDRGVNLIASVLPAATCLTQLDLCGNEISDAG 175



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 53/109 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A    KL++L+ +++  N I   GI  LS      + L  L+L DNT+  +GA  +   
Sbjct: 67  IAGALPKLESLQAIDLRSNSIGPDGIEKLSACLARCRCLTSLHLGDNTLLAEGAKHIASM 126

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
           + K P L  LNL    L   G + IA  L   T L  ++L  NEIS  G
Sbjct: 127 IPKCPMLKSLNLCKNALLDRGVNLIASVLPAATCLTQLDLCGNEISDAG 175



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 75/157 (47%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++  +GA  LA     L+ L+ +++ +NGI  VG + +  A  E +++  LNL  N + 
Sbjct: 1   NQMSIKGAVRLAETVVHLRNLQSLDVSENGIGAVGCSKIVWALTELEHVEFLNLQGNDLQ 60

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +GA  +  AL KL SL  ++L    +   G   ++  L     L  ++L  N +  +G 
Sbjct: 61  AEGAKRIAGALPKLESLQAIDLRSNSIGPDGIEKLSACLARCRCLTSLHLGDNTLLAEGA 120

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             +   +     LK +N+ +N   + GV  +  ++ +
Sbjct: 121 KHIASMIPKCPMLKSLNLCKNALLDRGVNLIASVLPA 157



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 68/147 (46%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA     L+ L+ +++ +NGI  VG + +  A  E + +  LNL  N +  +GA  +  A
Sbjct: 11  LAETVVHLRNLQSLDVSENGIGAVGCSKIVWALTELEHVEFLNLQGNDLQAEGAKRIAGA 70

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L KL SL  ++L    +   G   ++  L     L  ++L  N +  +G   +   +   
Sbjct: 71  LPKLESLQAIDLRSNSIGPDGIEKLSACLARCRCLTSLHLGDNTLLAEGAKHIASMIPKC 130

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
             LK +N+ +N   + GV  +  ++ +
Sbjct: 131 PMLKSLNLCKNALLDRGVNLIASVLPA 157



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 57/113 (50%)

Query: 48  NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 107
           N ++ KGA+ L + +  L +L  L++ +  + + G S I   LT+   +E +NL  N++ 
Sbjct: 1   NQMSIKGAVRLAETVVHLRNLQSLDVSENGIGAVGCSKIVWALTELEHVEFLNLQGNDLQ 60

Query: 108 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
            +G   +  A+     L+ I++  N  G +G+E++   +       +L L D+
Sbjct: 61  AEGAKRIAGALPKLESLQAIDLRSNSIGPDGIEKLSACLARCRCLTSLHLGDN 113



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 57/113 (50%)

Query: 359 NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
           N ++ KGA+ L + +  L +L  L++ +  + + G S I   LT+   +E +NL  N++ 
Sbjct: 1   NQMSIKGAVRLAETVVHLRNLQSLDVSENGIGAVGCSKIVWALTELEHVEFLNLQGNDLQ 60

Query: 419 VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
            +G   +  A+     L+ I++  N  G +G+E++   +       +L L D+
Sbjct: 61  AEGAKRIAGALPKLESLQAIDLRSNSIGPDGIEKLSACLARCRCLTSLHLGDN 113



 Score = 38.1 bits (87), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 60/130 (46%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G   L++     +NL+ L++++N I   G   +  AL++L  +  LNL    L++ GA  
Sbjct: 7   GAVRLAETVVHLRNLQSLDVSENGIGAVGCSKIVWALTELEHVEFLNLQGNDLQAEGAKR 66

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           IA  L    +L+ ++L  N I   G   L   +     L  +++ +N    EG + +  +
Sbjct: 67  IAGALPKLESLQAIDLRSNSIGPDGIEKLSACLARCRCLTSLHLGDNTLLAEGAKHIASM 126

Query: 457 MKSFGMAAAL 466
           +    M  +L
Sbjct: 127 IPKCPMLKSL 136


>gi|296209319|ref|XP_002751479.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Callithrix jacchus]
          Length = 957

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 12/203 (5%)

Query: 260 LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L L NN +   G + ++K L +C     K  + L L     G+N++ +EG K LA   K 
Sbjct: 765 LGLYNNQITDVGARYITKILDEC-----KSLTHLKL-----GKNKITSEGGKCLALAVKN 814

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
            K++  V M  N +   G  A ++A   + +L  L+L  N ++ +G   L +AL +  SL
Sbjct: 815 SKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSL 874

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
            IL L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N T + +I 
Sbjct: 875 EILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNNTGITEIC 934

Query: 440 VSENQFGEE--GVEEMEKLMKSF 460
           ++ N    E   V E EK +  F
Sbjct: 935 LNGNLIKPEEAKVYEDEKRIICF 957



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 73/141 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +  +  + K+L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +A
Sbjct: 780 ITKILDECKSLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 839

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K  
Sbjct: 840 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 899

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             LK + + +NQ   +G  ++
Sbjct: 900 QTLKHLWLIQNQITAKGTAQL 920



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  K++  V M  N +   G  A ++A   +  L  L+L  N ++ +G   L +A
Sbjct: 808 LALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARA 867

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL IL L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 868 LQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNN 927

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 928 TGITEICLNGNLIKPEEAKVYEDEKRIICF 957



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query: 44  NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 103
            L+ N IT  G   L + L+K   +  L L +  +   GA  I K L +  +L  + L  
Sbjct: 738 RLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGK 797

Query: 104 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + ++
Sbjct: 798 NKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALR 841



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            L+ N IT  G   L + L+K   +  L L +  +   GA  I K L +  +L  + L  
Sbjct: 738 RLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARYITKILDECKSLTHLKLGK 797

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + ++
Sbjct: 798 NKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALR 841


>gi|407402832|gb|EKF29292.1| hypothetical protein MOQ_006932 [Trypanosoma cruzi marinkellei]
          Length = 447

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 156/373 (41%), Gaps = 66/373 (17%)

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA  L +++T+ DV L  NEI  +G   L   +   TKL+ +++  N      V    KL
Sbjct: 82  IASML-ESSTVRDVLLRYNEIGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVR---KL 137

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
           +KS  M+ AL                                LS N   H   A      
Sbjct: 138 LKSISMSTALT----------------------------RLGLSANKIGHEGAA------ 163

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
                         +L+  A L  LDLS N  GP G E +A LL +     L+ L+L  N
Sbjct: 164 ----------LLFRALEKNAYLKSLDLSLNEIGPSGAESIAHLL-ALPASPLKTLQLYGN 212

Query: 266 GLGITGCKLLSKAL--HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
            LG+ G +L++ A+  + C            L     G N   +  A+ LA + K+  TL
Sbjct: 213 HLGVAGVQLIANAVKGNKC------------LTDLTLGNNNATDAAAEALAEMLKENSTL 260

Query: 324 ERVEMPQNGIYHVGITALS-DAFEENKNLRHLNLNDNTITYKGAIPLGQAL--SKLPSLA 380
           E +++  N +   G+  L+ D    N  L  L+L+ N I   GA  + + L   +  +LA
Sbjct: 261 ETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGADEIAKTLIMHQGGALA 320

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
            L+L  C L   G   IA  +    TL +VNL+ N++  +  + L +++ N   +  +++
Sbjct: 321 RLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDL 380

Query: 441 SENQFGEEGVEEM 453
           S N+ GE G   +
Sbjct: 381 SANEIGEWGASNL 393



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 115/283 (40%), Gaps = 61/283 (21%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DL DN  GP   + +A +L SS    + ++ L  N +G  GC     AL +    S K 
Sbjct: 67  VDLIDNQLGPEQTQKIASMLESS---TVRDVLLRYNEIGKEGC----DALANVVNVSTK- 118

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKL-------KTLERVEMPQNGIYHVGITALS 342
              L L         L+  G  + AA  +KL         L R+ +  N I H G   L 
Sbjct: 119 ---LQL---------LDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLF 166

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIA-- 398
            A E+N  L+ L+L+ N I   GA  +   L+ LP+  L  L L    L  AG   IA  
Sbjct: 167 RALEKNAYLKSLDLSLNEIGPSGAESIAHLLA-LPASPLKTLQLYGNHLGVAGVQLIANA 225

Query: 399 ----KYLTD----------------------NTTLEDVNLTCNEISVQGGLDLVK-AMKN 431
               K LTD                      N+TLE ++L  N ++  G   L +  + N
Sbjct: 226 VKGNKCLTDLTLGNNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLAN 285

Query: 432 KTKLKQINVSENQFGEEGVEEMEK--LMKSFGMAAALVLEDDE 472
              L  +++S N  G  G +E+ K  +M   G  A L L   E
Sbjct: 286 NMFLVSLSLSANPIGSVGADEIAKTLIMHQGGALARLDLSSCE 328



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 3/141 (2%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALS-DAFEENKKLRHLNLNDNTITYKGAIPLGQAL- 62
           + K+  TLE +++  N +   G+  L+ D    N  L  L+L+ N I   GA  + + L 
Sbjct: 253 MLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGADEIAKTLI 312

Query: 63  -SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
             +  +LA L+L  C L   G   IA  +    TL +VNL+ N++  +  + L +++ N 
Sbjct: 313 MHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVVLSRSIVNS 372

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             +  +++S N+ GE G   +
Sbjct: 373 ISISIVDLSANEIGEWGASNL 393



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 146/353 (41%), Gaps = 31/353 (8%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  V +  N I   G  AL++    + KL+ L++  N +T      L +++S   +L  
Sbjct: 90  TVRDVLLRYNEIGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTR 149

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINV 129
           L L    +   GA+ + + L  N  L+ ++L+ NEI   G   +   +    + LK + +
Sbjct: 150 LGLSANKIGHEGAALLFRALEKNAYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQL 209

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
             N  G  GV+ +   +K       L L ++    +  E   E  +EN +    D     
Sbjct: 210 YGNHLGVAGVQLIANAVKGNKCLTDLTLGNNNATDAAAEALAEMLKENSTLETLD----- 264

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                          +N+  +      +   L     LV L LS N  G +G + +A  L
Sbjct: 265 -------------LRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGADEIAKTL 311

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL-KVFIAGRNRLENE 308
                 AL  L L++  LG TG   ++  +           + + L +V ++G N+L+NE
Sbjct: 312 IMHQGGALARLDLSSCELGPTGGMRIASLI----------AATITLNEVNLSG-NQLDNE 360

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
            A +L+       ++  V++  N I   G + L DA + N  +  L L+ N+I
Sbjct: 361 AAVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNSI 413


>gi|443719206|gb|ELU09480.1| hypothetical protein CAPTEDRAFT_200350 [Capitella teleta]
          Length = 539

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 113/229 (49%), Gaps = 22/229 (9%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCF--ALEELKLNNNGLGITGCKLLSK 277
           +L+    +V L + DN  G IGV  +A ++    C    +  L L  N +G  GC+++ +
Sbjct: 114 ALQGNIEVVSLIVDDNNLGWIGVGYVALMM----CENEVIRTLGLAKNQIGKRGCRVVME 169

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
            L + +  S  +         I+G N++++   + +A + K  + L  + +  N I   G
Sbjct: 170 MLLENHVLSSLD---------ISG-NQIDDNDMEFIAKIIKDNRNLTYLNLSHNNISDKG 219

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK---LPSLAILNLGDCLLKSAGA 394
              L  A  +N+ LR L+L+ N I  +G + + + L++   + S+++   G C+    GA
Sbjct: 220 AKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAENVVMSSISLAYNGLCI---TGA 276

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
            ++ + L  N  L D++LTCN +  +G   + KA+     L+++ +S N
Sbjct: 277 RAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALSTNENLQKLRISNN 325



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +A + K  + L ++ +  N I   G   L  A  +N+ LR L+L+ N I  +G + + +
Sbjct: 194 FIAKIIKDNRNLTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISE 253

Query: 61  ALSK---LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
            L++   + S+++   G C+    GA ++ + L  N  L D++LTCN +  +G   + KA
Sbjct: 254 GLAENVVMSSISLAYNGLCI---TGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKA 310

Query: 118 MKNKTKLKQINVSEN 132
           +     L+++ +S N
Sbjct: 311 LSTNENLQKLRISNN 325



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 82/159 (51%)

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
            +N++   G +++  +  +   L  +++  N I    +  ++   ++N+NL +LNL+ N 
Sbjct: 155 AKNQIGKRGCRVVMEMLLENHVLSSLDISGNQIDDNDMEFIAKIIKDNRNLTYLNLSHNN 214

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I+ KGA  L  A++   +L  L+L    ++  G  +I++ L +N  +  ++L  N + + 
Sbjct: 215 ISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEGLAENVVMSSISLAYNGLCIT 274

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           G   + + ++    L  ++++ N+  +EGV  + K + +
Sbjct: 275 GARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALST 313



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 64/119 (53%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           ++   ++N+ L +LNL+ N I+ KGA  L  A++   +L  L+L    ++  G  +I++ 
Sbjct: 195 IAKIIKDNRNLTYLNLSHNNISDKGAKFLQPAIADNETLRSLDLSWNKIRPRGGVAISEG 254

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
           L +N  +  ++L  N + + G   + + ++    L  ++++ N+  +EGV  + K + +
Sbjct: 255 LAENVVMSSISLAYNGLCITGARAMGECLQINEILTDLDLTCNRMFDEGVAFIAKALST 313


>gi|5174617|ref|NP_006083.1| nucleotide-binding oligomerization domain-containing protein 1
           [Homo sapiens]
 gi|20137579|sp|Q9Y239.1|NOD1_HUMAN RecName: Full=Nucleotide-binding oligomerization domain-containing
           protein 1; AltName: Full=Caspase recruitment
           domain-containing protein 4
 gi|4731026|gb|AAD28350.1|AF113925_1 Nod1 [Homo sapiens]
 gi|4760400|gb|AAD29125.1|AF126484_1 CARD4 [Homo sapiens]
 gi|5478674|gb|AAD43922.1| NOD1 protein [Homo sapiens]
 gi|44211246|gb|AAS46897.1| unknown [Homo sapiens]
 gi|51105869|gb|EAL24453.1| caspase recruitment domain family, member 4 [Homo sapiens]
 gi|119614351|gb|EAW93945.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614352|gb|EAW93946.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614353|gb|EAW93947.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
 gi|119614355|gb|EAW93949.1| caspase recruitment domain family, member 4, isoform CRA_b [Homo
           sapiens]
          Length = 953

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  L LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N I+ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A+++ T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  L+L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVLRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKS 459
             LK + + +NQ   +G  ++   ++S
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQS 922



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 74/144 (51%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
           K + + +NQ   +G  ++   ++S
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQS 922



 Score = 45.1 bits (105), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  L L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     LR   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFSRLTVLR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|399498096|emb|CCG20376.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEAPGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|355746246|gb|EHH50871.1| hypothetical protein EGM_01760 [Macaca fascicularis]
          Length = 1033

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 51/311 (16%)

Query: 196  SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS--- 252
            SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L+     
Sbjct: 709  SHAACSHRLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPDCN 768

Query: 253  --------------CCF----------ALEELKLNNNGLGITGCKLLSKALHD------- 281
                          CCF           L EL L++N LG  G +LL   L         
Sbjct: 769  IRRLWLGRCGLSHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCNLKK 828

Query: 282  ------------CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
                        C + +    +  +L     G N L + G  +L    K  +  L+++ +
Sbjct: 829  LWLVSCCLTSACCQDLASVLSTNRSLTRLYVGENALGDAGVAILCEKAKNPQCNLQKLGL 888

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  V  +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 889  VNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 947

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 948  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 1007

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1008 NYETKSALETL 1018



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 883  LQKLGLVNSGLTSVCCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 941

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 942  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 1001

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 1002 LSEMYFNYETKSALETL 1018


>gi|330840905|ref|XP_003292448.1| hypothetical protein DICPUDRAFT_50441 [Dictyostelium purpureum]
 gi|325077316|gb|EGC31037.1| hypothetical protein DICPUDRAFT_50441 [Dictyostelium purpureum]
          Length = 1029

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 70/123 (56%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G + + DA + N+ L+ L+LN N+I   GA  +G+AL    SL +L LG   + + G  S
Sbjct: 638 GASEIGDALKTNQYLQTLHLNFNSINSSGAKSIGKALKYNSSLKVLQLGYNEIGAKGLES 697

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           I+K L  N TL ++++  N I  +GGL L +A+K   KL+ IN   N  G +G   + KL
Sbjct: 698 ISKSLKVNKTLIELSVKNNLIPEKGGLALTEALKVNQKLESINFRGNFLGIKGSAALTKL 757

Query: 146 MKS 148
           + S
Sbjct: 758 LTS 760



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 70/123 (56%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G + + DA + N+ L+ L+LN N+I   GA  +G+AL    SL +L LG   + + G  S
Sbjct: 638 GASEIGDALKTNQYLQTLHLNFNSINSSGAKSIGKALKYNSSLKVLQLGYNEIGAKGLES 697

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           I+K L  N TL ++++  N I  +GGL L +A+K   KL+ IN   N  G +G   + KL
Sbjct: 698 ISKSLKVNKTLIELSVKNNLIPEKGGLALTEALKVNQKLESINFRGNFLGIKGSAALTKL 757

Query: 457 MKS 459
           + S
Sbjct: 758 LTS 760



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 60/115 (52%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + + GAK +    K   +L+ +++  N I   G+ ++S + + NK L  L++ +N I 
Sbjct: 660 NSINSSGAKSIGKALKYNSSLKVLQLGYNEIGAKGLESISKSLKVNKTLIELSVKNNLIP 719

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
            KG + L +AL     L  +N     L   G++++ K LT N TL  ++L+ N +
Sbjct: 720 EKGGLALTEALKVNQKLESINFRGNFLGIKGSAALTKLLTSNQTLTFMDLSHNNL 774


>gi|320165463|gb|EFW42362.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 285

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 83/164 (50%)

Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
           L V     N + + GA+ +A + K   TL  +++ +N I   G  A+++A + N NL  L
Sbjct: 68  LTVLTLRMNDIGDVGAQAIAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLL 127

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
               N I   GA  +  AL    +L  L+L    +  A A +IA+ L  NTTL  +NL+ 
Sbjct: 128 TFGWNHIGDAGAQAISAALKVNTTLTSLDLSVNRIGDAEAQAIAEALKVNTTLIWLNLSF 187

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N+I   G L + +A+K  TKL  + ++ N+ G   V  + + +K
Sbjct: 188 NQIGDTGALAIAEALKVNTKLITLRLAHNEIGNAAVPSIVQALK 231



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++   GA+ +A   K    L  + +  N I  VG  A+++  + N  L  L+L +N I 
Sbjct: 48  NQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTLTSLDLRENHIC 107

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL    +L +L  G   +  AGA +I+  L  NTTL  ++L+ N I     
Sbjct: 108 DAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSLDLSVNRIGDAEA 167

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A+K  T L  +N+S NQ G+ G   + + +K
Sbjct: 168 QAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALK 203



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K   TL  +++ +N I   G  A+++A + N  L  L    N I   GA  +  A
Sbjct: 86  IAELLKTNTTLTSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAA 145

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+L    +  A A +IA+ L  NTTL  +NL+ N+I   G L + +A+K  
Sbjct: 146 LKVNTTLTSLDLSVNRIGDAEAQAIAEALKVNTTLIWLNLSFNQIGDTGALAIAEALKVN 205

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           TKL  + ++ N+ G   V  + + +K
Sbjct: 206 TKLITLRLAHNEIGNAAVPSIVQALK 231



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K    L  + +  N I  VG  A+++  + N  L  L+L +N I   GA  + +A
Sbjct: 58  IAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTLTSLDLRENHICDAGAQAIAEA 117

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L +L  G   +  AGA +I+  L  NTTL  ++L+ N I       + +A+K  
Sbjct: 118 LKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSLDLSVNRIGDAEAQAIAEALKVN 177

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  +N+S NQ G+ G   + + +K
Sbjct: 178 TTLIWLNLSFNQIGDTGALAIAEALK 203



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 44/240 (18%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK   RL  L L  N  G +G + +A+LL+++    L  L L  N +   G + +++AL
Sbjct: 61  TLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNT--TLTSLDLRENHICDAGAQAIAEAL 118

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  + L L  F  G N + + GA+ ++A  K   TL  +++  N I      
Sbjct: 119 --------KVNTNLTLLTF--GWNHIGDAGAQAISAALKVNTTLTSLDLSVNRIGDAEAQ 168

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + N  L  LNL+ N I                       GD      GA +IA+
Sbjct: 169 AIAEALKVNTTLIWLNLSFNQI-----------------------GD-----TGALAIAE 200

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            L  NT L  + L  NEI       +V+A+K   K++ I     +  E   ++M  L++S
Sbjct: 201 ALKVNTKLITLRLAHNEIGNAAVPSIVQALKMNKKIRNI----CRCTETNAQKMHYLVQS 256



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  + +  N I  VG  A+++  + N +L  L L  N I   GA  + + L    +L  
Sbjct: 39  TVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTLTS 98

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L +  +  AGA +IA+ L  NT L  +    N I   G   +  A+K  T L  +++S
Sbjct: 99  LDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSLDLS 158

Query: 131 ENQFGEEGVEEMEKLMK 147
            N+ G+   + + + +K
Sbjct: 159 VNRIGDAEAQAIAEALK 175



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 65/137 (47%)

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
           T+  + +  N I  VG  A+++  + N  L  L L  N I   GA  + + L    +L  
Sbjct: 39  TVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTLTS 98

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L+L +  +  AGA +IA+ L  NT L  +    N I   G   +  A+K  T L  +++S
Sbjct: 99  LDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSLDLS 158

Query: 442 ENQFGEEGVEEMEKLMK 458
            N+ G+   + + + +K
Sbjct: 159 VNRIGDAEAQAIAEALK 175



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%)

Query: 37  NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 96
           N  +  +NL  N I   GA  + + L     L +L L    +   GA +IA+ L  NTTL
Sbjct: 37  NTTVTMINLLFNQIREVGARAIAETLKVNTRLTVLTLRMNDIGDVGAQAIAELLKTNTTL 96

Query: 97  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
             ++L  N I   G   + +A+K  T L  +    N  G+ G + +   +K
Sbjct: 97  TSLDLRENHICDAGAQAIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALK 147



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 7/148 (4%)

Query: 4   AVFKKLKTLEHVEMPQNGIYHVG---ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           A+ + LK   ++ +   G  H+G     A+S A + N  L  L+L+ N I    A  + +
Sbjct: 113 AIAEALKVNTNLTLLTFGWNHIGDAGAQAISAALKVNTTLTSLDLSVNRIGDAEAQAIAE 172

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL    +L  LNL    +   GA +IA+ L  NT L  + L  NEI       +V+A+K 
Sbjct: 173 ALKVNTTLIWLNLSFNQIGDTGALAIAEALKVNTKLITLRLAHNEIGNAAVPSIVQALKM 232

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
             K++ I     +  E   ++M  L++S
Sbjct: 233 NKKIRNI----CRCTETNAQKMHYLVQS 256


>gi|147882993|gb|ABQ51813.1| RAN GTPase-activating protein 2 [Nicotiana benthamiana]
          Length = 541

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 121/292 (41%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S     LEEL   N+G+        ++A+ +  
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELYFINDGISQEA----ARAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G +AL +
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A  +  +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGKCSHLKKLDLRDNMFGPEAGLVLSKALSKHENLTEVYLSYLNLEDEGAIAIVNTLKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSL +L                            +LG+  L   GA  IAK L  +  
Sbjct: 381 SAPSLGVLEMAGNDITEEAAPAIASCIAAKQFLSKLSLGENELMDGGAIQIAKALRGHNH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L++V++  N +   G   L + + +K + K +NV+ N   EEG++E++ + +
Sbjct: 441 LKEVDMNTNALRRAGARVLARTVLHKDEFKLLNVNGNFISEEGIDELKDIFE 492



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 56/105 (53%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L +  N IT + A  +   ++    L+ L+LG+  L   GA  IAK L  +  L++V++ 
Sbjct: 388 LEMAGNDITEEAAPAIASCIAAKQFLSKLSLGENELMDGGAIQIAKALRGHNHLKEVDMN 447

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N +   G   L + + +K + K +NV+ N   EEG++E++ + +
Sbjct: 448 TNALRRAGARVLARTVLHKDEFKLLNVNGNFISEEGIDELKDIFE 492



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L   ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEALGKCSHLKKLDLRD 335

Query: 132 NQFGEEG 138
           N FG E 
Sbjct: 336 NMFGPEA 342



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 29/140 (20%)

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLG------------------------QAL 373
           ++  S+A E   NL+ LNL+DN +  KG    G                        +A+
Sbjct: 204 MSIFSEALE-GSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAV 262

Query: 374 SKL-PS---LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
           S+L PS   L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+
Sbjct: 263 SELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSALCEAL 322

Query: 430 KNKTKLKQINVSENQFGEEG 449
              + LK++++ +N FG E 
Sbjct: 323 GKCSHLKKLDLRDNMFGPEA 342



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 132/355 (37%), Gaps = 88/355 (24%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L  LNL D  L   G  +  K L   T LE++    + IS +    + + + +  KLK +
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELYFINDGISQEAARAVSELVPSTEKLKVL 275

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
           +   N  G+EG   + +++K      + +LED    CS      E             S 
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKR-----SPLLED--FRCSSTRVGSEG-----------GSA 317

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
           L       SH                             L +LDL DN FGP        
Sbjct: 318 LCEALGKCSH-----------------------------LKKLDLRDNMFGP-------- 340

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
                             GL      +LSKAL      SK E      +V+++  N LE+
Sbjct: 341 ----------------EAGL------VLSKAL------SKHEN---LTEVYLSYLN-LED 368

Query: 308 EGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           EGA  +    K    +L  +EM  N I      A++      + L  L+L +N +   GA
Sbjct: 369 EGAIAIVNTLKDSAPSLGVLEMAGNDITEEAAPAIASCIAAKQFLSKLSLGENELMDGGA 428

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
           I + +AL     L  +++    L+ AGA  +A+ +      + +N+  N IS +G
Sbjct: 429 IQIAKALRGHNHLKEVDMNTNALRRAGARVLARTVLHKDEFKLLNVNGNFISEEG 483



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE +    +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELYFINDGISQEAARAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S++ + L   + L+ ++L  N    + GL L KA+     L ++ +S 
Sbjct: 304 RCSSTRVGSEGGSALCEALGKCSHLKKLDLRDNMFGPEAGLVLSKALSKHENLTEVYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|407402853|gb|EKF29300.1| hypothetical protein MOQ_006924, partial [Trypanosoma cruzi
           marinkellei]
          Length = 486

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 156/373 (41%), Gaps = 66/373 (17%)

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA  L +++T+ DV L  NEI  +G   L   +   TKL+ +++  N      V    KL
Sbjct: 119 IASML-ESSTVRDVLLRYNEIGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVR---KL 174

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
           +KS  M+ AL                                LS N   H   A      
Sbjct: 175 LKSISMSTALT----------------------------RLGLSANKIGHEGAA------ 200

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
                         +L+  A L  LDLS N  GP G E +A LL +     L+ L+L  N
Sbjct: 201 ----------LLFRALEKNAYLKSLDLSLNEIGPSGAESIAHLL-ALPASPLKTLQLYGN 249

Query: 266 GLGITGCKLLSKAL--HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
            LG+ G +L++ A+  + C            L     G N   +  A+ LA + K+  TL
Sbjct: 250 HLGVAGVQLIANAVKGNKC------------LTDLTLGNNNATDAAAEALAEMLKENSTL 297

Query: 324 ERVEMPQNGIYHVGITALS-DAFEENKNLRHLNLNDNTITYKGAIPLGQAL--SKLPSLA 380
           E +++  N +   G+  L+ D    N  L  L+L+ N I   GA  + + L   +  +LA
Sbjct: 298 ETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGADEIAKTLIMHQGGALA 357

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
            L+L  C L   G   IA  +    TL +VNL+ N++  +  + L +++ N   +  +++
Sbjct: 358 RLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVVLSRSIVNSISISIVDL 417

Query: 441 SENQFGEEGVEEM 453
           S N+ GE G   +
Sbjct: 418 SANEIGEWGASNL 430



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 115/283 (40%), Gaps = 61/283 (21%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           +DL DN  GP   + +A +L SS    + ++ L  N +G  GC     AL +    S K 
Sbjct: 104 VDLIDNQLGPEQTQKIASMLESS---TVRDVLLRYNEIGKEGC----DALANVVNVSTK- 155

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKL-------KTLERVEMPQNGIYHVGITALS 342
              L L         L+  G  + AA  +KL         L R+ +  N I H G   L 
Sbjct: 156 ---LQL---------LDIRGNGLTAACVRKLLKSISMSTALTRLGLSANKIGHEGAALLF 203

Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIA-- 398
            A E+N  L+ L+L+ N I   GA  +   L+ LP+  L  L L    L  AG   IA  
Sbjct: 204 RALEKNAYLKSLDLSLNEIGPSGAESIAHLLA-LPASPLKTLQLYGNHLGVAGVQLIANA 262

Query: 399 ----KYLTD----------------------NTTLEDVNLTCNEISVQGGLDLVK-AMKN 431
               K LTD                      N+TLE ++L  N ++  G   L +  + N
Sbjct: 263 VKGNKCLTDLTLGNNNATDAAAEALAEMLKENSTLETLDLRSNTLTATGVRILARDGLAN 322

Query: 432 KTKLKQINVSENQFGEEGVEEMEK--LMKSFGMAAALVLEDDE 472
              L  +++S N  G  G +E+ K  +M   G  A L L   E
Sbjct: 323 NMFLVSLSLSANPIGSVGADEIAKTLIMHQGGALARLDLSSCE 365



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 3/141 (2%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALS-DAFEENKKLRHLNLNDNTITYKGAIPLGQAL- 62
           + K+  TLE +++  N +   G+  L+ D    N  L  L+L+ N I   GA  + + L 
Sbjct: 290 MLKENSTLETLDLRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGADEIAKTLI 349

Query: 63  -SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
             +  +LA L+L  C L   G   IA  +    TL +VNL+ N++  +  + L +++ N 
Sbjct: 350 MHQGGALARLDLSSCELGPTGGMRIASLIAATITLNEVNLSGNQLDNEAAVVLSRSIVNS 409

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             +  +++S N+ GE G   +
Sbjct: 410 ISISIVDLSANEIGEWGASNL 430



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 144/352 (40%), Gaps = 29/352 (8%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  V +  N I   G  AL++    + KL+ L++  N +T      L +++S   +L  
Sbjct: 127 TVRDVLLRYNEIGKEGCDALANVVNVSTKLQLLDIRGNGLTAACVRKLLKSISMSTALTR 186

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINV 129
           L L    +   GA+ + + L  N  L+ ++L+ NEI   G   +   +    + LK + +
Sbjct: 187 LGLSANKIGHEGAALLFRALEKNAYLKSLDLSLNEIGPSGAESIAHLLALPASPLKTLQL 246

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
             N  G  GV+ +   +K       L L ++    +  E   E  +EN +    D     
Sbjct: 247 YGNHLGVAGVQLIANAVKGNKCLTDLTLGNNNATDAAAEALAEMLKENSTLETLD----- 301

Query: 190 HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
                          +N+  +      +   L     LV L LS N  G +G + +A  L
Sbjct: 302 -------------LRSNTLTATGVRILARDGLANNMFLVSLSLSANPIGSVGADEIAKTL 348

Query: 250 RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
                 AL  L L++  LG TG   ++  +      +         +V ++G N+L+NE 
Sbjct: 349 IMHQGGALARLDLSSCELGPTGGMRIASLIAATITLN---------EVNLSG-NQLDNEA 398

Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           A +L+       ++  V++  N I   G + L DA + N  +  L L+ N+I
Sbjct: 399 AVVLSRSIVNSISISIVDLSANEIGEWGASNLIDATQLNARISSLLLHGNSI 450


>gi|399498000|emb|CCG20328.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENGLKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENGLKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|320163988|gb|EFW40887.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 451

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 53/267 (19%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           H+   Q G+      A+++A + N+ L  LNLN N I   GA  + +AL    +L +L L
Sbjct: 26  HLNCKQIGVAEA--QAIAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVNTTLTVLFL 83

Query: 74  GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 133
           G   +   GA +IA+ L  NTTL  ++L  N+I   G     +A+K  T L ++ +  NQ
Sbjct: 84  GGTQIGDIGALAIAEALKVNTTLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQ 143

Query: 134 FGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDS 193
            G+ G +   + +K+                                    N+ L+    
Sbjct: 144 IGDAGAQAFAEALKA------------------------------------NTTLT---- 163

Query: 194 NHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
                   Q   + NQ      Q+   +L+    L  L L +N FG +G + +A+ L+ +
Sbjct: 164 --------QLQLDFNQIGEVGMQAIAEALQVNKTLTLLYLKENRFGDVGAQAIAEALKVN 215

Query: 253 CCFALEELKLNNNGLGITGCKLLSKAL 279
               L EL+LN+N +G  G   +++AL
Sbjct: 216 T--TLTELRLNDNQIGDGGACAIAEAL 240



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 118/266 (44%), Gaps = 13/266 (4%)

Query: 194 NHSHNASNQSHNNSNQSHNTSNQSHM-SLKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
           +   NA  + H N  Q      Q+   +LK    L +L+L+ N  G  G + +A+ L+ +
Sbjct: 16  DQVKNADGELHLNCKQIGVAEAQAIAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVN 75

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
               +  L L    +G  G   +++AL       K   +  AL +   G N++ + GA+ 
Sbjct: 76  TTLTV--LFLGGTQIGDIGALAIAEAL-------KVNTTLTALSL---GNNQIGDAGAQA 123

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
            A   K    L  + +  N I   G  A ++A + N  L  L L+ N I   G   + +A
Sbjct: 124 FAEALKANTMLTELTLDWNQIGDAGAQAFAEALKANTTLTQLQLDFNQIGEVGMQAIAEA 183

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L    +L +L L +      GA +IA+ L  NTTL ++ L  N+I   G   + +A+K  
Sbjct: 184 LQVNKTLTLLYLKENRFGDVGAQAIAEALKVNTTLTELRLNDNQIGDGGACAIAEALKVN 243

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMK 458
             + ++++  N  G  G +  ++  K
Sbjct: 244 KTVTRLSLDRNCIGSVGSQAFDEARK 269



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  +TL  + +  N I   G  A+++A + N  L  L L    I   GA+ + +A
Sbjct: 40  IAEALKVNRTLTDLNLNVNLIGDAGAQAIAEALKVNTTLTVLFLGGTQIGDIGALAIAEA 99

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L+LG+  +  AGA + A+ L  NT L ++ L  N+I   G     +A+K  
Sbjct: 100 LKVNTTLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQIGDAGAQAFAEALKAN 159

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L Q+ +  NQ GE G++ + + ++
Sbjct: 160 TTLTQLQLDFNQIGEVGMQAIAEALQ 185



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 13/223 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L  L L     G IG   +A+ L+ +    L  L L NN +G  G +  ++AL
Sbjct: 71  ALKVNTTLTVLFLGGTQIGDIGALAIAEALKVNT--TLTALSLGNNQIGDAGAQAFAEAL 128

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      +   L       N++ + GA+  A   K   TL ++++  N I  VG+ 
Sbjct: 129 K----------ANTMLTELTLDWNQIGDAGAQAFAEALKANTTLTQLQLDFNQIGEVGMQ 178

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           A+++A + NK L  L L +N     GA  + +AL    +L  L L D  +   GA +IA+
Sbjct: 179 AIAEALQVNKTLTLLYLKENRFGDVGAQAIAEALKVNTTLTELRLNDNQIGDGGACAIAE 238

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
            L  N T+  ++L  N I   G     +A K   +  Q++V +
Sbjct: 239 ALKVNKTVTRLSLDRNCIGSVGSQAFDEARKGNCRC-QVDVRD 280



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 10/214 (4%)

Query: 259 ELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
           EL LN   +G+   + +++AL        +  + L L V     N + + GA+ +A   K
Sbjct: 24  ELHLNCKQIGVAEAQAIAEALK-----VNRTLTDLNLNV-----NLIGDAGAQAIAEALK 73

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
              TL  + +    I  +G  A+++A + N  L  L+L +N I   GA    +AL     
Sbjct: 74  VNTTLTVLFLGGTQIGDIGALAIAEALKVNTTLTALSLGNNQIGDAGAQAFAEALKANTM 133

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L  L L    +  AGA + A+ L  NTTL  + L  N+I   G   + +A++    L  +
Sbjct: 134 LTELTLDWNQIGDAGAQAFAEALKANTTLTQLQLDFNQIGEVGMQAIAEALQVNKTLTLL 193

Query: 439 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
            + EN+FG+ G + + + +K       L L D++
Sbjct: 194 YLKENRFGDVGAQAIAEALKVNTTLTELRLNDNQ 227



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 66/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A   K    L  + +  N I   G  A ++A + N  L  L L+ N I   G   + +A
Sbjct: 124 FAEALKANTMLTELTLDWNQIGDAGAQAFAEALKANTTLTQLQLDFNQIGEVGMQAIAEA 183

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L +L L +      GA +IA+ L  NTTL ++ L  N+I   G   + +A+K  
Sbjct: 184 LQVNKTLTLLYLKENRFGDVGAQAIAEALKVNTTLTELRLNDNQIGDGGACAIAEALKVN 243

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             + ++++  N  G  G +  ++  K
Sbjct: 244 KTVTRLSLDRNCIGSVGSQAFDEARK 269



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 66/146 (45%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + +  N I   G  A ++A + N  L  L L+ N I   GA    +A
Sbjct: 96  IAEALKVNTTLTALSLGNNQIGDAGAQAFAEALKANTMLTELTLDWNQIGDAGAQAFAEA 155

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L L    +   G  +IA+ L  N TL  + L  N     G   + +A+K  
Sbjct: 156 LKANTTLTQLQLDFNQIGEVGMQAIAEALQVNKTLTLLYLKENRFGDVGAQAIAEALKVN 215

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L ++ +++NQ G+ G   + + +K
Sbjct: 216 TTLTELRLNDNQIGDGGACAIAEALK 241


>gi|290970571|ref|XP_002668179.1| predicted protein [Naegleria gruberi]
 gi|284081412|gb|EFC35435.1| predicted protein [Naegleria gruberi]
          Length = 592

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 202/453 (44%), Gaps = 94/453 (20%)

Query: 9   LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
           +K L  +++  N I   G+ ++S    E ++L  L+++ N I  +GA    + +S++  L
Sbjct: 180 MKHLTSLDISGNRIGDEGVKSIS----EMEQLISLDISTNVIGGEGA----KFISEMKQL 231

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
             L   D      G    AK +++   L  +N++ NEI V+G   L+  MK  T L   N
Sbjct: 232 TSL---DIFYNRIGGEG-AKLISEMKQLTSLNISTNEIDVEGS-KLISEMKQLTSL---N 283

Query: 129 VSENQFGEEGVEEME--KLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNS 186
           +S N  G EGV+ +   K + S  ++  L+   DEG                        
Sbjct: 284 ISGNLIGVEGVKSISGMKQLTSLNISGNLI--GDEG------------------------ 317

Query: 187 NLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLA 246
             +   S      S   +NN        + S M      +L   D+S+N     G + ++
Sbjct: 318 --AKLISEMKQLTSLDIYNNRIGDEGVKSISEM-----KQLTSFDISNNLIYDEGAKSIS 370

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
            + +      L  L ++NN +G  G K +S+          K+ + L +      +N ++
Sbjct: 371 GMKQ------LTSLTISNNRIGGEGVKFISEI---------KQLTSLNIS-----KNEID 410

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
            EGAK ++     +K L  + + +NGI   G+ ++S    E K L  L++++N I  +G 
Sbjct: 411 GEGAKFISG----MKQLTSLTIYKNGIGDEGVKSIS----EMKQLTSLDISNNRIGDEGV 462

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
               +++S++  L  L++   ++   GA    K++++   L  ++++ N I  +G    V
Sbjct: 463 ----KSISEMEQLISLDISTNVIGGEGA----KFISEMKQLTSLDISGNLIYDEG----V 510

Query: 427 KAMKNKTKLKQINVSENQFGEEG---VEEMEKL 456
           K++    +L  +N+S NQ G EG   + EM++L
Sbjct: 511 KSISEMKQLTSLNISGNQIGVEGAKFISEMKQL 543



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 204/474 (43%), Gaps = 104/474 (21%)

Query: 2   LAAVFKKLKTLEHVEMPQ-----NGIYHVGITALS-DAFEENK------KLRHLNLNDNT 49
           L   FKK   L+ +E+ +     N I +V  ++ + DAFE+ K      +L  ++++ N 
Sbjct: 85  LVIQFKKKFALKRIELFRKSQFMNCIVNVKFSSWTLDAFEQPKFISGMKQLTSVDISGNR 144

Query: 50  ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 109
           I  +GA    +++S++  L  LN+ + ++   GA SI+                      
Sbjct: 145 IGIEGA----KSISEMKQLTSLNISNNIIGVEGAKSIS---------------------- 178

Query: 110 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQ 169
                   MK+ T L   ++S N+ G+EGV+ + ++ +   +  +  +   EG     E 
Sbjct: 179 -------GMKHLTSL---DISGNRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEM 228

Query: 170 DEESEEE---NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGAR 226
            + +  +   N    EG    +S      S N S     N      +   S M      +
Sbjct: 229 KQLTSLDIFYNRIGGEGAKL-ISEMKQLTSLNIST----NEIDVEGSKLISEM-----KQ 278

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L++S N    IGVEG+  +   S    L  L ++ N +G  G KL+S+         
Sbjct: 279 LTSLNISGNL---IGVEGVKSI---SGMKQLTSLNISGNLIGDEGAKLISEMKQ------ 326

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
                  +L ++    NR+ +EG K ++    ++K L   ++  N IY  G  ++S    
Sbjct: 327 -----LTSLDIY---NNRIGDEGVKSIS----EMKQLTSFDISNNLIYDEGAKSISGM-- 372

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
             K L  L +++N I  +G     + +S++  L  LN+    +   GA    K+++    
Sbjct: 373 --KQLTSLTISNNRIGGEGV----KFISEIKQLTSLNISKNEIDGEGA----KFISGMKQ 422

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE---EMEKLM 457
           L  + +  N I  +G    VK++    +L  +++S N+ G+EGV+   EME+L+
Sbjct: 423 LTSLTIYKNGIGDEG----VKSISEMKQLTSLDISNNRIGDEGVKSISEMEQLI 472


>gi|402876801|ref|XP_003902142.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 1
           [Papio anubis]
          Length = 471

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 31/248 (12%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   + +L+L DN     GV  L ++L+ +  + L+E+ ++NN LG+ G +++S  
Sbjct: 110 IALVSNTAVTKLELEDNCIMEEGVLSLVEMLQEN--YYLQEMNISNNHLGLEGARIIS-- 165

Query: 279 LHDCYESS---------------KKEGSPLA--------LKVFIAGRNRLENEGAKMLAA 315
             D +E +               ++  +PL         +K      N+  + G + L  
Sbjct: 166 --DFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQ 223

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           +      L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L  
Sbjct: 224 MLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRL 283

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KT 433
              L  L++G   + + GAS I+K L  N +L  + L  N IS+ G + L+ A+K   K+
Sbjct: 284 NSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDGAILLILAIKRNPKS 343

Query: 434 KLKQINVS 441
           +++++++S
Sbjct: 344 RMEELDIS 351



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 125/324 (38%), Gaps = 59/324 (18%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NT +  + L  N I  +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 135

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++N+S N  G EG     +++  F                        
Sbjct: 136 LVEMLQENYYLQEMNISNNHLGLEGA----RIISDFF----------------------- 168

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
            E N S     N  LS ND      A                    +L T  R+ +LDLS
Sbjct: 169 -ERNSSSIW--NLELSGNDFKEESAAP----------------LCQALSTNYRIKKLDLS 209

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            N F  IG E L  +L  +    L  L L+ N     G   L   L      +K + S  
Sbjct: 210 HNQFSDIGGEQLGQML--AINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS-- 265

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
                    N L NEGA  L  V +    L  +++  N I + G + +S   E N++LR 
Sbjct: 266 --------MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRV 317

Query: 354 LNLNDNTITYKGAIPLGQALSKLP 377
           L L  N I+  GAI L  A+ + P
Sbjct: 318 LKLFLNPISMDGAILLILAIKRNP 341



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L     L  L
Sbjct: 231 LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYL 290

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++G   + + GAS I+K L  N +L  + L  N IS+ G + L+ A+K   K++++++++
Sbjct: 291 DVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDI 350

Query: 130 S 130
           S
Sbjct: 351 S 351



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 13/231 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++L+ +  GP G + +A  L S+   A+ +L+L +N +   G   L + L + Y      
Sbjct: 93  VNLNHHGLGPRGTKAIAIALVSNT--AVTKLELEDNCIMEEGVLSLVEMLQENY------ 144

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEEN 348
                L+      N L  EGA++++  F++   ++  +E+  N         L  A   N
Sbjct: 145 ----YLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTN 200

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             ++ L+L+ N  +  G   LGQ L+    L  L+L      + GA ++   L  N TL 
Sbjct: 201 YRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLT 260

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            ++L+ N +  +G + L + ++  + L  ++V  N  G EG  ++ K ++S
Sbjct: 261 KLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLES 311



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 66/138 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++E+  N         L  A   N +++ L+L+ N  +  G   LGQ L+    L  
Sbjct: 174 SIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTS 233

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L      + GA ++   L  N TL  ++L+ N +  +G + L + ++  + L  ++V 
Sbjct: 234 LDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVG 293

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N  G EG  ++ K ++S
Sbjct: 294 GNDIGNEGASKISKGLES 311



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 29/162 (17%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKG-------------------- 54
           +E+  N I   G+ +L +  +EN  L+ +N+++N +  +G                    
Sbjct: 121 LELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLEL 180

Query: 55  ---------AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 105
                    A PL QALS    +  L+L        G   + + L  N  L  ++L+ N 
Sbjct: 181 SGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNN 240

Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
              +G + L   ++    L ++++S N  G EG   + ++++
Sbjct: 241 FHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLR 282


>gi|300798702|ref|NP_001178571.1| NACHT, LRR and PYD domains-containing protein 3 [Rattus norvegicus]
          Length = 1035

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 15/220 (6%)

Query: 221  LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
            L +  +LVELDLSDNA G  GV  L        C  L+ L  N   L +  C L S    
Sbjct: 793  LSSSQKLVELDLSDNALGDFGVRLL--------CVGLKHLLCNLQKLWLVSCCLTSAC-- 842

Query: 281  DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
             C + +    S  +L     G N L + G ++L    K  +  L+++ +  +G+  +  +
Sbjct: 843  -CQDLALVLSSNHSLTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSLCCS 901

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSI 397
            AL+   + N+NL HL L  N +   G   L + L   P   L +L L +C L S     +
Sbjct: 902  ALTSVLKTNQNLTHLYLRSNALGDMGLKLLCEGLLH-PDCKLQMLELDNCSLTSHSCWDL 960

Query: 398  AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
            +  LT N +L  +NL+ N++     + L + +K +  L Q
Sbjct: 961  STILTHNQSLRKLNLSNNDLGDLCVVTLCEVLKQQGCLLQ 1000


>gi|405975257|gb|EKC39838.1| T-complex-associated testis-expressed protein 1 [Crassostrea gigas]
          Length = 521

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 9/208 (4%)

Query: 257 LEELKLNNNGLGITGC------KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           +EEL L     G+  C       L +    DC   ++   +   LKVF   R++++++  
Sbjct: 255 IEELHLT---YGVKDCGMNFEWNLFNFTARDCLLLAQCVAATKGLKVFRLHRSKVDDDKV 311

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           ++L +       L  +++  N I   G  A+      +  L  LNL DN + + GA  + 
Sbjct: 312 RVLISHILDHPGLTELDLSHNVISDRGARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIA 371

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
            AL+K  +L  LN+    L   G  +I K L  NTTL ++N+  +++         + + 
Sbjct: 372 HALTKNTTLTDLNIRLNRLGDEGGQAICKALLKNTTLCNINMASSDLGEPTAAIFSQVVM 431

Query: 431 NKTKLKQINVSENQFGEEGVEEMEKLMK 458
             T LK +++S N+ G EG +++++ M+
Sbjct: 432 QNTTLKSVDLSSNRLGAEGGKQIQEGME 459



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L  L+L+ N I+ +GA  +G+ L+    L  LNL D  ++ +GA +IA  LT NTTL D+
Sbjct: 324 LTELDLSHNVISDRGARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDL 383

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
           N+  N +  +GG  + KA+   T L  IN++ +  GE
Sbjct: 384 NIRLNRLGDEGGQAICKALLKNTTLCNINMASSDLGE 420



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 72/147 (48%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + + GA+ +         L ++ +  N + H G  A++ A  +N  L  LN+  N + 
Sbjct: 332 NVISDRGARAIGKFLNNHSQLVKLNLCDNDVRHSGAQAIAHALTKNTTLTDLNIRLNRLG 391

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +G   + +AL K  +L  +N+    L    A+  ++ +  NTTL+ V+L+ N +  +GG
Sbjct: 392 DEGGQAICKALLKNTTLCNINMASSDLGEPTAAIFSQVVMQNTTLKSVDLSSNRLGAEGG 451

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEG 449
             + + M++ T +  +++     G+E 
Sbjct: 452 KQIQEGMEDNTTITHMDLRLTDSGQEA 478



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 61/119 (51%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N + H G  A++ A  +N  L  LN+  N +  +G   + +AL K  +L  +N+    L 
Sbjct: 360 NDVRHSGAQAIAHALTKNTTLTDLNIRLNRLGDEGGQAICKALLKNTTLCNINMASSDLG 419

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
              A+  ++ +  NTTL+ V+L+ N +  +GG  + + M++ T +  +++     G+E 
Sbjct: 420 EPTAAIFSQVVMQNTTLKSVDLSSNRLGAEGGKQIQEGMEDNTTITHMDLRLTDSGQEA 478


>gi|399498008|emb|CCG20332.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  G+      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGIRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCETLGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   GI A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L + +   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCETLGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCETLGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L + +   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCETLGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|326431953|gb|EGD77523.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818]
          Length = 1076

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 12/222 (5%)

Query: 228 VELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSK 287
           ++  L +N+ G  G   LA  LR      L+ L LNNN +   GC  L+ AL        
Sbjct: 60  IQAFLDNNSIGKEGCVALAGALRGHT--GLQRLVLNNNSIEKEGCVALAGALR------- 110

Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
                  L+      N +E EG   LA   +    L+ + +  N I   G  AL+ A   
Sbjct: 111 ---GHTGLQWLGLTNNSIEKEGCVALAGALRGHTGLQELYLNNNSIEKEGCVALAGALRG 167

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
           +  L+ L L++N+I  +G + L  AL     L  L L +  ++  G  ++A  L  +T L
Sbjct: 168 HTGLQELYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCVALAGALRGHTGL 227

Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           +++ L  N I  +G + L  A++  T L+++ + +N   +EG
Sbjct: 228 QELFLNNNSIEKEGCVALAGALRGHTGLQELYLDDNSIEKEG 269



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 12/219 (5%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L  L L++N+    G   LA  LR      L+EL LNNN +   GC  L+ AL
Sbjct: 108 ALRGHTGLQWLGLTNNSIEKEGCVALAGALRGHT--GLQELYLNNNSIEKEGCVALAGAL 165

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                          L+      N +E EG   LA   +    L+ + +  N I   G  
Sbjct: 166 R----------GHTGLQELYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCV 215

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
           AL+ A   +  L+ L LN+N+I  +G + L  AL     L  L L D  ++  G  ++A 
Sbjct: 216 ALAGALRGHTGLQELFLNNNSIEKEGCVALAGALRGHTGLQELYLDDNSIEKEGCVALAG 275

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
            L  +T L  + L+ N I  +G + L  A++  T+L+ +
Sbjct: 276 ALRGHTGLYILGLSNNSIEKEGCVALAGALREHTRLQTL 314



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
           L+NN +G  GC  L+ AL               L+  +   N +E EG   LA   +   
Sbjct: 64  LDNNSIGKEGCVALAGALR----------GHTGLQRLVLNNNSIEKEGCVALAGALRGHT 113

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            L+ + +  N I   G  AL+ A   +  L+ L LN+N+I  +G + L  AL     L  
Sbjct: 114 GLQWLGLTNNSIEKEGCVALAGALRGHTGLQELYLNNNSIEKEGCVALAGALRGHTGLQE 173

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           L L +  ++  G  ++A  L  +T L+++ L+ N I  +G + L  A++  T L+++ ++
Sbjct: 174 LYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCVALAGALRGHTGLQELFLN 233

Query: 442 ENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
            N   +EG   +   ++       L L+D+
Sbjct: 234 NNSIEKEGCVALAGALRGHTGLQELYLDDN 263



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 77/159 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   +    L+ + +  N I   G  AL+ A   +  L+ L LN+N+I  +G + L  A
Sbjct: 105 LAGALRGHTGLQWLGLTNNSIEKEGCVALAGALRGHTGLQELYLNNNSIEKEGCVALAGA 164

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L L +  ++  G  ++A  L  +T L+++ L+ N I  +G + L  A++  
Sbjct: 165 LRGHTGLQELYLSNNSIEKEGCVALAGALRGHTGLQELFLSNNSIEKEGCVALAGALRGH 224

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
           T L+++ ++ N   +EG   +   ++       L L+D+
Sbjct: 225 TGLQELFLNNNSIEKEGCVALAGALRGHTGLQELYLDDN 263



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G  AL+ A   +  L+ L LN+N+I  +G + L  AL     L  L L +  ++
Sbjct: 67  NSIGKEGCVALAGALRGHTGLQRLVLNNNSIEKEGCVALAGALRGHTGLQWLGLTNNSIE 126

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             G  ++A  L  +T L+++ L  N I  +G + L  A++  T L+++ +S N   +EG
Sbjct: 127 KEGCVALAGALRGHTGLQELYLNNNSIEKEGCVALAGALRGHTGLQELYLSNNSIEKEG 185



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 61/126 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   +    L+ + +  N I   G  AL+ A   +  L+ L LN+N+I  +G + L  A
Sbjct: 189 LAGALRGHTGLQELFLSNNSIEKEGCVALAGALRGHTGLQELFLNNNSIEKEGCVALAGA 248

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L L D  ++  G  ++A  L  +T L  + L+ N I  +G + L  A++  
Sbjct: 249 LRGHTGLQELYLDDNSIEKEGCVALAGALRGHTGLYILGLSNNSIEKEGCVALAGALREH 308

Query: 122 TKLKQI 127
           T+L+ +
Sbjct: 309 TRLQTL 314


>gi|399497854|emb|CCG20255.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
 gi|399497862|emb|CCG20259.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEAPGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|194670841|ref|XP_606462.4| PREDICTED: uncharacterized protein C14orf166B homolog [Bos taurus]
 gi|297479949|ref|XP_002691169.1| PREDICTED: uncharacterized protein C14orf166B homolog [Bos taurus]
 gi|296482882|tpg|DAA24997.1| TPA: ribonuclease inhibitor-like [Bos taurus]
          Length = 582

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 127/254 (50%), Gaps = 23/254 (9%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   ++ L+L+DN     G+  L ++L+ +  + L+E+ +++N LG+ G ++LS+ 
Sbjct: 110 IALVSNTTVLTLELADNCITEEGILSLVEMLQEN--YYLQEMNVSDNDLGLEGARILSEF 167

Query: 279 LHDCYES----------SKKEGSPL---------ALKVFIAGRNRLENEGAKMLAAVFKK 319
           L +   S           K+E + L          +K      N+  ++  + L  +   
Sbjct: 168 LQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAI 227

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L+ +++  N +Y  G+ AL +    N +L+ L+L+ N+   +GA  LG+ L     L
Sbjct: 228 NVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYL 287

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
             L+L    + + G S I++ L  N +L+ + L  N IS+ G + L+ ++K   K++++ 
Sbjct: 288 TYLDLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGAVLLILSIKRNPKSRMED 347

Query: 438 INVSENQFGEEGVE 451
           I++S     E+ V+
Sbjct: 348 IDISNVLVSEQFVK 361



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 71/131 (54%), Gaps = 2/131 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N +Y  G+ AL +    N  L+ L+L+ N+   +GA  LG+ L     L  L
Sbjct: 231 LQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNSYLTYL 290

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           +L    + + G S I++ L  N +L+ + L  N IS+ G + L+ ++K   K++++ I++
Sbjct: 291 DLSSNNITNDGLSKISRALELNESLKVLKLFLNPISMDGAVLLILSIKRNPKSRMEDIDI 350

Query: 130 SENQFGEEGVE 140
           S     E+ V+
Sbjct: 351 SNVLVSEQFVK 361



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 29/179 (16%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           G K +A       T+  +E+  N I   GI +L +  +EN  L+ +N++DN +  +GA  
Sbjct: 104 GTKAIAIALVSNTTVLTLELADNCITEEGILSLVEMLQENYYLQEMNVSDNDLGLEGARI 163

Query: 369 LG-----------------------------QALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L                              QALS    +  L+L            + +
Sbjct: 164 LSEFLQNNTSSLFSLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQ 223

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N  L+ ++L+ N + ++G + L   +++   LK++++S N FG EG   + ++++
Sbjct: 224 MLAINVGLQSLDLSWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLR 282



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 29/279 (10%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NTT+  + L  N I+ +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILS 135

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++NVS+N  G EG   + + +++    ++L      G    EE  E  
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQN--NTSSLFSLQLSGNNFKEESAELF 193

Query: 174 EEENDSDAEGDNSNLSHN---DSNHSHNASNQSHNNSNQSHNTSNQSHM----------S 220
            +   ++    + +LSHN   D    +     + N   QS + S  +H+           
Sbjct: 194 CQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVGLQSLDLS-WNHLYIRGVVALCNG 252

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L++   L +LDLS N+FG  G   L ++LR +    L  L L++N +   G   +S+AL 
Sbjct: 253 LRSNVSLKKLDLSMNSFGNEGAAALGEVLRLNS--YLTYLDLSSNNITNDGLSKISRAL- 309

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           +  ES K       LK+F+   N +  +GA +L    K+
Sbjct: 310 ELNESLK------VLKLFL---NPISMDGAVLLILSIKR 339



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 29/166 (17%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLG----------- 59
           T+  +E+  N I   GI +L +  +EN  L+ +N++DN +  +GA  L            
Sbjct: 117 TVLTLELADNCITEEGILSLVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQNNTSSLF 176

Query: 60  ------------------QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
                             QALS    +  L+L            + + L  N  L+ ++L
Sbjct: 177 SLQLSGNNFKEESAELFCQALSNNYRIKSLDLSHNKFCDKAGEYLGQMLAINVGLQSLDL 236

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           + N + ++G + L   +++   LK++++S N FG EG   + ++++
Sbjct: 237 SWNHLYIRGVVALCNGLRSNVSLKKLDLSMNSFGNEGAAALGEVLR 282



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G +P+   +  +   + +NL    L   G  +IA  L  NTT+  + L  N I+ +G L 
Sbjct: 77  GVVPVSYFIRNMEE-SYINLNHHGLGPNGTKAIAIALVSNTTVLTLELADNCITEEGILS 135

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           LV+ ++    L+++NVS+N  G EG   + + ++
Sbjct: 136 LVEMLQENYYLQEMNVSDNDLGLEGARILSEFLQ 169


>gi|326435750|gb|EGD81320.1| hypothetical protein PTSG_13176 [Salpingoeca sp. ATCC 50818]
          Length = 1567

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 63/122 (51%)

Query: 337  GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
            G  A++ A + N  LR LNL+ N++  +GA+ L + L    SL  L L    +   GA +
Sbjct: 1164 GACAVARALKNNTCLRTLNLHLNSVNDEGAVALARRLKHNTSLMSLELHQNSISDEGAVA 1223

Query: 397  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
             A+ L  NTTL+ + L  N I  +G + L + +K  T  K  N+  NQ  + G   + ++
Sbjct: 1224 FAEMLKHNTTLKSLKLHYNHIRDEGAVALAEMLKQNTNFKSFNLMSNQISDVGAIALAEM 1283

Query: 457  MK 458
            +K
Sbjct: 1284 LK 1285



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 63/122 (51%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            G  A++ A + N  LR LNL+ N++  +GA+ L + L    SL  L L    +   GA +
Sbjct: 1164 GACAVARALKNNTCLRTLNLHLNSVNDEGAVALARRLKHNTSLMSLELHQNSISDEGAVA 1223

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
             A+ L  NTTL+ + L  N I  +G + L + +K  T  K  N+  NQ  + G   + ++
Sbjct: 1224 FAEMLKHNTTLKSLKLHYNHIRDEGAVALAEMLKQNTNFKSFNLMSNQISDVGAIALAEM 1283

Query: 146  MK 147
            +K
Sbjct: 1284 LK 1285



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 72/141 (51%)

Query: 303  NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
            N + +EGA  LA   K   +L  +E+ QN I   G  A ++  + N  L+ L L+ N I 
Sbjct: 1186 NSVNDEGAVALARRLKHNTSLMSLELHQNSISDEGAVAFAEMLKHNTTLKSLKLHYNHIR 1245

Query: 363  YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             +GA+ L + L +  +    NL    +   GA ++A+ L  NT+LE + L  N I+  GG
Sbjct: 1246 DEGAVALAEMLKQNTNFKSFNLMSNQISDVGAIALAEMLKVNTSLERLFLDSNSITPVGG 1305

Query: 423  LDLVKAMKNKTKLKQINVSEN 443
              L  A+ +   LKQ+ + +N
Sbjct: 1306 AALGAALGHNRTLKQLEIQKN 1326



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 66/135 (48%)

Query: 309  GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
            GA  +A   K    L  + +  N +   G  AL+   + N +L  L L+ N+I+ +GA+ 
Sbjct: 1164 GACAVARALKNNTCLRTLNLHLNSVNDEGAVALARRLKHNTSLMSLELHQNSISDEGAVA 1223

Query: 369  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
              + L    +L  L L    ++  GA ++A+ L  NT  +  NL  N+IS  G + L + 
Sbjct: 1224 FAEMLKHNTTLKSLKLHYNHIRDEGAVALAEMLKQNTNFKSFNLMSNQISDVGAIALAEM 1283

Query: 429  MKNKTKLKQINVSEN 443
            +K  T L+++ +  N
Sbjct: 1284 LKVNTSLERLFLDSN 1298



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 63/131 (48%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            +A   K    L  + +  N +   G  AL+   + N  L  L L+ N+I+ +GA+   + 
Sbjct: 1168 VARALKNNTCLRTLNLHLNSVNDEGAVALARRLKHNTSLMSLELHQNSISDEGAVAFAEM 1227

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L    +L  L L    ++  GA ++A+ L  NT  +  NL  N+IS  G + L + +K  
Sbjct: 1228 LKHNTTLKSLKLHYNHIRDEGAVALAEMLKQNTNFKSFNLMSNQISDVGAIALAEMLKVN 1287

Query: 122  TKLKQINVSEN 132
            T L+++ +  N
Sbjct: 1288 TSLERLFLDSN 1298



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 66/131 (50%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LA   K   +L  +E+ QN I   G  A ++  + N  L+ L L+ N I  +GA+ L + 
Sbjct: 1196 LARRLKHNTSLMSLELHQNSISDEGAVAFAEMLKHNTTLKSLKLHYNHIRDEGAVALAEM 1255

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
            L +  +    NL    +   GA ++A+ L  NT+LE + L  N I+  GG  L  A+ + 
Sbjct: 1256 LKQNTNFKSFNLMSNQISDVGAIALAEMLKVNTSLERLFLDSNSITPVGGAALGAALGHN 1315

Query: 122  TKLKQINVSEN 132
              LKQ+ + +N
Sbjct: 1316 RTLKQLEIQKN 1326



 Score = 48.5 bits (114), Expect = 0.007,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 12/175 (6%)

Query: 241  GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA 300
            G   +A  L+++ C  L  L L+ N +   G   L++ L       K   S ++L++   
Sbjct: 1164 GACAVARALKNNTC--LRTLNLHLNSVNDEGAVALARRL-------KHNTSLMSLELH-- 1212

Query: 301  GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
             +N + +EGA   A + K   TL+ +++  N I   G  AL++  ++N N +  NL  N 
Sbjct: 1213 -QNSISDEGAVAFAEMLKHNTTLKSLKLHYNHIRDEGAVALAEMLKQNTNFKSFNLMSNQ 1271

Query: 361  ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
            I+  GAI L + L    SL  L L    +   G +++   L  N TL+ + +  N
Sbjct: 1272 ISDVGAIALAEMLKVNTSLERLFLDSNSITPVGGAALGAALGHNRTLKQLEIQKN 1326



 Score = 47.4 bits (111), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 55/112 (49%)

Query: 36   ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
            + +K+R +  N       GA  + +AL     L  LNL    +   GA ++A+ L  NT+
Sbjct: 1146 DKEKIRAIANNTCGSWVGGACAVARALKNNTCLRTLNLHLNSVNDEGAVALARRLKHNTS 1205

Query: 96   LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            L  + L  N IS +G +   + +K+ T LK + +  N   +EG   + +++K
Sbjct: 1206 LMSLELHQNSISDEGAVAFAEMLKHNTTLKSLKLHYNHIRDEGAVALAEMLK 1257


>gi|297298317|ref|XP_002805175.1| PREDICTED: uncharacterized protein C14orf166B-like [Macaca mulatta]
          Length = 488

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 31/248 (12%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   + +L+L DN     GV  L ++L+ +  + L+E+ ++NN LG+ G +++S  
Sbjct: 127 IALVSNTAVTKLELEDNCIMEEGVLSLVEMLQEN--YYLQEMNISNNHLGLEGARIIS-- 182

Query: 279 LHDCYESS---------------KKEGSPLA--------LKVFIAGRNRLENEGAKMLAA 315
             D +E +               ++  +PL         +K      N+  + G + L  
Sbjct: 183 --DFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQ 240

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           +      L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L  
Sbjct: 241 MLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRL 300

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KT 433
              L  L++G   + + GAS I+K L  N +L  + L  N IS+ G + L+ A+K   K+
Sbjct: 301 NSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDGAILLILAIKRNPKS 360

Query: 434 KLKQINVS 441
           +++++++S
Sbjct: 361 RMEELDIS 368



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 125/324 (38%), Gaps = 59/324 (18%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NT +  + L  N I  +G L 
Sbjct: 94  GVVPVSYFIRNMEE-SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 152

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++N+S N  G EG     +++  F                        
Sbjct: 153 LVEMLQENYYLQEMNISNNHLGLEGA----RIISDFF----------------------- 185

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
            E N S     N  LS ND      A                    +L T  R+ +LDLS
Sbjct: 186 -ERNSSSIW--NLELSGNDFKEESAAP----------------LCQALSTNYRIKKLDLS 226

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            N F  IG E L  +L  +    L  L L+ N     G   L   L      +K + S  
Sbjct: 227 HNQFSDIGGEQLGQML--AINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS-- 282

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
                    N L NEGA  L  V +    L  +++  N I + G + +S   E N++LR 
Sbjct: 283 --------MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRV 334

Query: 354 LNLNDNTITYKGAIPLGQALSKLP 377
           L L  N I+  GAI L  A+ + P
Sbjct: 335 LKLFLNPISMDGAILLILAIKRNP 358



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L     L  L
Sbjct: 248 LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYL 307

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++G   + + GAS I+K L  N +L  + L  N IS+ G + L+ A+K   K++++++++
Sbjct: 308 DVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDI 367

Query: 130 S 130
           S
Sbjct: 368 S 368



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 13/231 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++L+ +  GP G + +A  L S+   A+ +L+L +N +   G   L + L + Y      
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNT--AVTKLELEDNCIMEEGVLSLVEMLQENY------ 161

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEEN 348
                L+      N L  EGA++++  F++   ++  +E+  N         L  A   N
Sbjct: 162 ----YLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTN 217

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             ++ L+L+ N  +  G   LGQ L+    L  L+L      + GA ++   L  N TL 
Sbjct: 218 YRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLT 277

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            ++L+ N +  +G + L + ++  + L  ++V  N  G EG  ++ K ++S
Sbjct: 278 KLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLES 328



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 66/138 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++E+  N         L  A   N +++ L+L+ N  +  G   LGQ L+    L  
Sbjct: 191 SIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTS 250

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L      + GA ++   L  N TL  ++L+ N +  +G + L + ++  + L  ++V 
Sbjct: 251 LDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVG 310

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N  G EG  ++ K ++S
Sbjct: 311 GNDIGNEGASKISKGLES 328



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 29/162 (17%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKG-------------------- 54
           +E+  N I   G+ +L +  +EN  L+ +N+++N +  +G                    
Sbjct: 138 LELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLEL 197

Query: 55  ---------AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 105
                    A PL QALS    +  L+L        G   + + L  N  L  ++L+ N 
Sbjct: 198 SGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNN 257

Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
              +G + L   ++    L ++++S N  G EG   + ++++
Sbjct: 258 FHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLR 299


>gi|399498026|emb|CCG20341.1| Ran GTPase activating protein 2 [Solanum stenotomum]
          Length = 553

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EVAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|355693464|gb|EHH28067.1| hypothetical protein EGK_18408 [Macaca mulatta]
 gi|355778755|gb|EHH63791.1| hypothetical protein EGM_16831 [Macaca fascicularis]
          Length = 488

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 31/248 (12%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   + +L+L DN     GV  L ++L+ +  + L+E+ ++NN LG+ G +++S  
Sbjct: 127 IALVSNTAVTKLELEDNCIMEEGVLSLVEMLQEN--YYLQEMNISNNHLGLEGARIIS-- 182

Query: 279 LHDCYESS---------------KKEGSPLA--------LKVFIAGRNRLENEGAKMLAA 315
             D +E +               ++  +PL         +K      N+  + G + L  
Sbjct: 183 --DFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQ 240

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           +      L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L  
Sbjct: 241 MLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRL 300

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KT 433
              L  L++G   + + GAS I+K L  N +L  + L  N IS+ G + L+ A+K   K+
Sbjct: 301 NSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDGAILLILAIKRNPKS 360

Query: 434 KLKQINVS 441
           +++++++S
Sbjct: 361 RMEELDIS 368



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 125/324 (38%), Gaps = 59/324 (18%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NT +  + L  N I  +G L 
Sbjct: 94  GVVPVSYFIRNMEE-SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 152

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++N+S N  G EG     +++  F                        
Sbjct: 153 LVEMLQENYYLQEMNISNNHLGLEGA----RIISDFF----------------------- 185

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
            E N S     N  LS ND      A                    +L T  R+ +LDLS
Sbjct: 186 -ERNSSSIW--NLELSGNDFKEESAAP----------------LCQALSTNYRIKKLDLS 226

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            N F  IG E L  +L  +    L  L L+ N     G   L   L      +K + S  
Sbjct: 227 HNQFSDIGGEQLGQML--AINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS-- 282

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
                    N L NEGA  L  V +    L  +++  N I + G + +S   E N++LR 
Sbjct: 283 --------MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRV 334

Query: 354 LNLNDNTITYKGAIPLGQALSKLP 377
           L L  N I+  GAI L  A+ + P
Sbjct: 335 LKLFLNPISMDGAILLILAIKRNP 358



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L     L  L
Sbjct: 248 LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYL 307

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++G   + + GAS I+K L  N +L  + L  N IS+ G + L+ A+K   K++++++++
Sbjct: 308 DVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDI 367

Query: 130 S 130
           S
Sbjct: 368 S 368



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 13/231 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++L+ +  GP G + +A  L S+   A+ +L+L +N +   G   L + L + Y      
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNT--AVTKLELEDNCIMEEGVLSLVEMLQENY------ 161

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEEN 348
                L+      N L  EGA++++  F++   ++  +E+  N         L  A   N
Sbjct: 162 ----YLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTN 217

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             ++ L+L+ N  +  G   LGQ L+    L  L+L      + GA ++   L  N TL 
Sbjct: 218 YRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLT 277

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            ++L+ N +  +G + L + ++  + L  ++V  N  G EG  ++ K ++S
Sbjct: 278 KLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLES 328



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 66/138 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++E+  N         L  A   N +++ L+L+ N  +  G   LGQ L+    L  
Sbjct: 191 SIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTS 250

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L      + GA ++   L  N TL  ++L+ N +  +G + L + ++  + L  ++V 
Sbjct: 251 LDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVG 310

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N  G EG  ++ K ++S
Sbjct: 311 GNDIGNEGASKISKGLES 328



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 29/162 (17%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKG-------------------- 54
           +E+  N I   G+ +L +  +EN  L+ +N+++N +  +G                    
Sbjct: 138 LELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLEL 197

Query: 55  ---------AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 105
                    A PL QALS    +  L+L        G   + + L  N  L  ++L+ N 
Sbjct: 198 SGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNN 257

Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
              +G + L   ++    L ++++S N  G EG   + ++++
Sbjct: 258 FHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLR 299


>gi|402876803|ref|XP_003902143.1| PREDICTED: uncharacterized protein C14orf166B homolog isoform 2
           [Papio anubis]
          Length = 488

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 31/248 (12%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   + +L+L DN     GV  L ++L+ +  + L+E+ ++NN LG+ G +++S  
Sbjct: 127 IALVSNTAVTKLELEDNCIMEEGVLSLVEMLQEN--YYLQEMNISNNHLGLEGARIIS-- 182

Query: 279 LHDCYESS---------------KKEGSPLA--------LKVFIAGRNRLENEGAKMLAA 315
             D +E +               ++  +PL         +K      N+  + G + L  
Sbjct: 183 --DFFERNSSSIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQ 240

Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
           +      L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L  
Sbjct: 241 MLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRL 300

Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KT 433
              L  L++G   + + GAS I+K L  N +L  + L  N IS+ G + L+ A+K   K+
Sbjct: 301 NSCLVYLDVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDGAILLILAIKRNPKS 360

Query: 434 KLKQINVS 441
           +++++++S
Sbjct: 361 RMEELDIS 368



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 125/324 (38%), Gaps = 59/324 (18%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NT +  + L  N I  +G L 
Sbjct: 94  GVVPVSYFIRNMEE-SYVNLNHHGLGPRGTKAIAIALVSNTAVTKLELEDNCIMEEGVLS 152

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++N+S N  G EG     +++  F                        
Sbjct: 153 LVEMLQENYYLQEMNISNNHLGLEGA----RIISDFF----------------------- 185

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
            E N S     N  LS ND      A                    +L T  R+ +LDLS
Sbjct: 186 -ERNSSSIW--NLELSGNDFKEESAAP----------------LCQALSTNYRIKKLDLS 226

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            N F  IG E L  +L  +    L  L L+ N     G   L   L      +K + S  
Sbjct: 227 HNQFSDIGGEQLGQML--AINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLS-- 282

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
                    N L NEGA  L  V +    L  +++  N I + G + +S   E N++LR 
Sbjct: 283 --------MNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLESNESLRV 334

Query: 354 LNLNDNTITYKGAIPLGQALSKLP 377
           L L  N I+  GAI L  A+ + P
Sbjct: 335 LKLFLNPISMDGAILLILAIKRNP 358



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  N  +  G  AL +    N  L  L+L+ N +  +GA+ LG+ L     L  L
Sbjct: 248 LTSLDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYL 307

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++G   + + GAS I+K L  N +L  + L  N IS+ G + L+ A+K   K++++++++
Sbjct: 308 DVGGNDIGNEGASKISKGLESNESLRVLKLFLNPISMDGAILLILAIKRNPKSRMEELDI 367

Query: 130 S 130
           S
Sbjct: 368 S 368



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 13/231 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           ++L+ +  GP G + +A  L S+   A+ +L+L +N +   G   L + L + Y      
Sbjct: 110 VNLNHHGLGPRGTKAIAIALVSNT--AVTKLELEDNCIMEEGVLSLVEMLQENY------ 161

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEEN 348
                L+      N L  EGA++++  F++   ++  +E+  N         L  A   N
Sbjct: 162 ----YLQEMNISNNHLGLEGARIISDFFERNSSSIWNLELSGNDFKEESAAPLCQALSTN 217

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             ++ L+L+ N  +  G   LGQ L+    L  L+L      + GA ++   L  N TL 
Sbjct: 218 YRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNNFHTRGAVALCNGLRGNVTLT 277

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            ++L+ N +  +G + L + ++  + L  ++V  N  G EG  ++ K ++S
Sbjct: 278 KLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVGGNDIGNEGASKISKGLES 328



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 66/138 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++ ++E+  N         L  A   N +++ L+L+ N  +  G   LGQ L+    L  
Sbjct: 191 SIWNLELSGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTS 250

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L      + GA ++   L  N TL  ++L+ N +  +G + L + ++  + L  ++V 
Sbjct: 251 LDLSWNNFHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLRLNSCLVYLDVG 310

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N  G EG  ++ K ++S
Sbjct: 311 GNDIGNEGASKISKGLES 328



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 29/162 (17%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKG-------------------- 54
           +E+  N I   G+ +L +  +EN  L+ +N+++N +  +G                    
Sbjct: 138 LELEDNCIMEEGVLSLVEMLQENYYLQEMNISNNHLGLEGARIISDFFERNSSSIWNLEL 197

Query: 55  ---------AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 105
                    A PL QALS    +  L+L        G   + + L  N  L  ++L+ N 
Sbjct: 198 SGNDFKEESAAPLCQALSTNYRIKKLDLSHNQFSDIGGEQLGQMLAINVGLTSLDLSWNN 257

Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
              +G + L   ++    L ++++S N  G EG   + ++++
Sbjct: 258 FHTRGAVALCNGLRGNVTLTKLDLSMNGLGNEGAVALGEVLR 299


>gi|399497998|emb|CCG20327.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  G+      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGIRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   GI A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|71756091|ref|XP_828960.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|70834346|gb|EAN79848.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 713

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 13/215 (6%)

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
           I V+ +A+ L+++    +  L +  N  G+ G + L +A+         E +P  ++   
Sbjct: 47  IDVKCIAETLQTTR-HTVRALIMEGNAFGLNGLQALLEAI---------EVNPGIVRELR 96

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERV-EMPQNGIYHVGITALSDAFEENK-NLRHLNLN 357
            GRN+L+++ A ++  V  +     RV ++ +N I  +G+  ++ A      ++  L+ +
Sbjct: 97  LGRNKLKDQAAVVIGHVLSRSGCGLRVLDLSENEITKLGVIPIAAALSNGLCDIVELSFH 156

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
           +N I    A  LGQA+ +   L  L+LG   ++  GA  +AK +    +L  ++LT N I
Sbjct: 157 NNKIEADAATYLGQAIRQAGKLKHLHLGYNTIRDEGAVQLAKCIPVTVSLSTLDLTANRI 216

Query: 418 SVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVE 451
              GG +L +A+   T  ++++N+  N F  E +E
Sbjct: 217 GASGGRELARALMTTTCNIQRLNLRHNLFDSETIE 251



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L  +++ +N I  +G+  ++ A       +  L+ ++N I    A  LGQA+ +   L  
Sbjct: 121 LRVLDLSENEITKLGVIPIAAALSNGLCDIVELSFHNNKIEADAATYLGQAIRQAGKLKH 180

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINV 129
           L+LG   ++  GA  +AK +    +L  ++LT N I   GG +L +A+   T  ++++N+
Sbjct: 181 LHLGYNTIRDEGAVQLAKCIPVTVSLSTLDLTANRIGASGGRELARALMTTTCNIQRLNL 240

Query: 130 SENQFGEEGVE 140
             N F  E +E
Sbjct: 241 RHNLFDSETIE 251



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 12/191 (6%)

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
           H+  ++G  L  LDLS+N    +GV  +A  L +  C  + EL  +NN +       L +
Sbjct: 112 HVLSRSGCGLRVLDLSENEITKLGVIPIAAALSNGLC-DIVELSFHNNKIEADAATYLGQ 170

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           A+       ++ G    LK    G N + +EGA  LA       +L  +++  N I   G
Sbjct: 171 AI-------RQAGK---LKHLHLGYNTIRDEGAVQLAKCIPVTVSLSTLDLTANRIGASG 220

Query: 338 ITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
              L+ A      N++ LNL  N    +     G+ +++  SL  L LG        A+ 
Sbjct: 221 GRELARALMTTTCNIQRLNLRHNLFDSETIEMYGEVIARNTSLIQLFLGFMNPAPESAAV 280

Query: 397 IAKYLTDNTTL 407
           +   L  N T+
Sbjct: 281 VLSSLRKNRTM 291


>gi|399497876|emb|CCG20266.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQTN--LEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         LE
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMYSHLE 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++   +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHPIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 44.7 bits (104), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++   +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHPIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 60/127 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + LE ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMYSHLEKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 27/126 (21%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + L+++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLEKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + L+++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMYSHLEKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|261334888|emb|CBH17882.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 713

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 13/215 (6%)

Query: 240 IGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFI 299
           I V+ +A+ L+++    +  L +  N  G+ G + L +A+         E +P  ++   
Sbjct: 47  IDVKCIAETLQTTR-HTVRALIMEGNAFGLNGLQALLEAI---------EVNPGIVRELR 96

Query: 300 AGRNRLENEGAKMLAAVFKKLKTLERV-EMPQNGIYHVGITALSDAFEENK-NLRHLNLN 357
            GRN+L+++ A ++  V  +     RV ++ +N I  +G+  ++ A      ++  L+ +
Sbjct: 97  LGRNKLKDQAAVVIGHVLSRSGCGLRVLDLSENEITKLGVIPIAAALSNGLCDIVELSFH 156

Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
           +N I    A  LGQA+ +   L  L+LG   ++  GA  +AK +    +L  ++LT N I
Sbjct: 157 NNKIEADAATYLGQAIRQAGKLKHLHLGYNTIRDEGAVQLAKCIPVTVSLSTLDLTANRI 216

Query: 418 SVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVE 451
              GG +L +A+   T  ++++N+  N F  E +E
Sbjct: 217 GASGGRELARALMTTTCNIQRLNLRHNLFDSETIE 251



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L  +++ +N I  +G+  ++ A       +  L+ ++N I    A  LGQA+ +   L  
Sbjct: 121 LRVLDLSENEITKLGVIPIAAALSNGLCDIVELSFHNNKIEADAATYLGQAIRQAGKLKH 180

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINV 129
           L+LG   ++  GA  +AK +    +L  ++LT N I   GG +L +A+   T  ++++N+
Sbjct: 181 LHLGYNTIRDEGAVQLAKCIPVTVSLSTLDLTANRIGASGGRELARALMTTTCNIQRLNL 240

Query: 130 SENQFGEEGVE 140
             N F  E +E
Sbjct: 241 RHNLFDSETIE 251



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 12/191 (6%)

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK 277
           H+  ++G  L  LDLS+N    +GV  +A  L +  C  + EL  +NN +       L +
Sbjct: 112 HVLSRSGCGLRVLDLSENEITKLGVIPIAAALSNGLC-DIVELSFHNNKIEADAATYLGQ 170

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           A+       ++ G    LK    G N + +EGA  LA       +L  +++  N I   G
Sbjct: 171 AI-------RQAGK---LKHLHLGYNTIRDEGAVQLAKCIPVTVSLSTLDLTANRIGASG 220

Query: 338 ITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
              L+ A      N++ LNL  N    +     G+ +++  SL  L LG        A+ 
Sbjct: 221 GRELARALMTTTCNIQRLNLRHNLFDSETIEMYGEVIARNTSLIQLFLGFMNPAPESAAV 280

Query: 397 IAKYLTDNTTL 407
           +   L  N T+
Sbjct: 281 VLSSLRKNRTM 291


>gi|301767766|ref|XP_002919315.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
           domain-containing protein 1-like [Ailuropoda
           melanoleuca]
          Length = 962

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 83/156 (53%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + G K+L     K K L  + +  N I  VG   ++   +E K L HL L +N IT
Sbjct: 747 NQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGENKIT 806

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +G   L  A+    S+  + +    +   GA++ A+ L ++ +L +++L  N IS +GG
Sbjct: 807 SEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGISTEGG 866

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             L +A+++ T L+   +++N+  +E  E + +++K
Sbjct: 867 KSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLK 902



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 12/206 (5%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           L  L L NN +   G + +++ L +C     K  + L L     G N++ +EG K LA  
Sbjct: 767 LTFLGLYNNQITDVGARYIARILDEC-----KGLTHLKL-----GENKITSEGGKCLALA 816

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
            K  K++  + M  N I   G TA ++A   + +L +L+L  N I+ +G   L QAL   
Sbjct: 817 VKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQHN 876

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            +L I  L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A+++ T + 
Sbjct: 877 TTLRIFWLTKNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQSNTGIM 936

Query: 437 QINVSENQFGEE--GVEEMEKLMKSF 460
           +I ++ N    E   V E EK +  F
Sbjct: 937 EICLNGNLIKPEEAKVFEDEKRIVCF 962



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 11/207 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +  +G K+L       YE   K      L ++    N++ + GA+ 
Sbjct: 735 CFSCLTVIRLSVNQITDSGVKVL-------YEELTKYKILTFLGLY---NNQITDVGARY 784

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +A +  + K L  +++ +N I   G   L+ A + +K++  + +  N I  +GA    +A
Sbjct: 785 IARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEA 844

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NTTL    LT NE++ +    L + +K  
Sbjct: 845 LRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLKVN 904

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKS 459
             LK + + +NQ   +G+ ++   ++S
Sbjct: 905 QTLKHLWLIQNQITAKGIAQLADALQS 931



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 75/140 (53%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K K L  + +  N I  VG   ++   +E K L HL L +N IT +G   L  A+    S
Sbjct: 763 KYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKS 822

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           +  + +    +   GA++ A+ L ++ +L +++L  N IS +GG  L +A+++ T L+  
Sbjct: 823 IFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIF 882

Query: 128 NVSENQFGEEGVEEMEKLMK 147
            +++N+  +E  E + +++K
Sbjct: 883 WLTKNELNDEVAESLAEMLK 902



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 75/147 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  + K L H+++ +N I   G   L+ A + +K +  + +  N I  +GA    +A
Sbjct: 785 IARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEA 844

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    + + G  S+A+ L  NTTL    LT NE++ +    L + +K  
Sbjct: 845 LRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLKVN 904

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
             LK + + +NQ   +G+ ++   ++S
Sbjct: 905 QTLKHLWLIQNQITAKGIAQLADALQS 931



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           + L+ N IT  G   L + L+K   L  L L +  +   GA  IA+ L +   L  + L 
Sbjct: 742 IRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLG 801

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N+I+ +GG  L  A+KN   + +I +  N+ G+EG     + ++
Sbjct: 802 ENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALR 846


>gi|399497944|emb|CCG20300.1| Ran GTPase activating protein 2 [Solanum cardiophyllum]
          Length = 553

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G  L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GCNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  L+  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNLISEEGVDELKEIFK 492



 Score = 45.1 bits (105), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  L+  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELEDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNLISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 38.1 bits (87), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|395839574|ref|XP_003792663.1| PREDICTED: protein NLRC5 [Otolemur garnettii]
          Length = 1877

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 43/395 (10%)

Query: 58   LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
            L +  ++L  L++  +  C    A    +   L   + L+   LT + +S +G   L   
Sbjct: 1469 LMETCARLQQLSLSQVNLCDDDDASFLLLQTLLPTLSELKKFRLTSSYVSTKGLAHLASG 1528

Query: 118  MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
            +     L+++++S NQF EEG +          +  AL     EG+C  +  D       
Sbjct: 1529 LGPCHHLEELDLSNNQFSEEGTK---------ALIGAL-----EGKCRLKRLDL------ 1568

Query: 178  DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMS--LKTGARLVELDLSDN 235
             S      SNL+      S     QS   S  S       H+S  ++T   L EL LS N
Sbjct: 1569 -SHLPLGGSNLAMLTQGLSRMTLLQSLRLSRNSIGDLGCCHISEVVRTATSLEELGLSYN 1627

Query: 236  AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
              G  G + LA +L       L ++ L+ NG+G+ G   L+++L  C            L
Sbjct: 1628 QIGDAGAQHLAAILPG--LPKLRKIDLSVNGIGMAGGVQLAESLALCRH----------L 1675

Query: 296  KVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
            +  + G N L +     LA  + ++LK L    +P + +   G+  LS A + + ++  +
Sbjct: 1676 EELMLGCNALGDPTVLGLARELTQQLKIL---HLPSSHLGPKGVLGLSQALDGHPHMEEI 1732

Query: 355  NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
            NL +N++  +G +   +    LP L  ++L  C + +  A  +A        LE + L+ 
Sbjct: 1733 NLAENSLA-EGVLHFCKG---LPLLRQIDLVSCKIDNQNAKLLAAGFALCPALEVILLSW 1788

Query: 415  NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
            N +  +   +L + +   ++LK++++ +NQ    G
Sbjct: 1789 NFLGDEAAAELARILPQMSQLKRVDLEKNQITAWG 1823



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 145/373 (38%), Gaps = 65/373 (17%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            LE +++  N     G  AL  A E   +L+ L+L+   +       L Q LS++  L  L
Sbjct: 1535 LEELDLSNNQFSEEGTKALIGALEGKCRLKRLDLSHLPLGGSNLAMLTQGLSRMTLLQSL 1594

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
             L    +   G   I++ +   T+LE++ L+ N+I   G   L   +    KL++I++S 
Sbjct: 1595 RLSRNSIGDLGCCHISEVVRTATSLEELGLSYNQIGDAGAQHLAAILPGLPKLRKIDLSV 1654

Query: 132  NQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHN 191
            N                 GMA  + L +    C   E     E     +A GD + L   
Sbjct: 1655 N---------------GIGMAGGVQLAESLALCRHLE-----ELMLGCNALGDPTVLG-- 1692

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRS 251
                                       ++ +   +L  L L  +  GP GV GL+  L  
Sbjct: 1693 ---------------------------LARELTQQLKILHLPSSHLGPKGVLGLSQALDG 1725

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
                 +EE+ L  N L           LH C      +G PL  ++ +    +++N+ AK
Sbjct: 1726 HP--HMEEINLAENSLA-------EGVLHFC------KGLPLLRQIDLVS-CKIDNQNAK 1769

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
            +LAA F     LE + +  N +       L+    +   L+ ++L  N IT  GA  L +
Sbjct: 1770 LLAAGFALCPALEVILLSWNFLGDEAAAELARILPQMSQLKRVDLEKNQITAWGAWLLAE 1829

Query: 372  ALSKLPSLAILNL 384
             L+   S+ ++ L
Sbjct: 1830 GLALGSSIRVIRL 1842



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 13/212 (6%)

Query: 240  IGVEGLADLLRS-SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF 298
            +  +GLA L      C  LEEL L+NN     G K L  AL       + + S L L   
Sbjct: 1517 VSTKGLAHLASGLGPCHHLEELDLSNNQFSEEGTKALIGALEGKCRLKRLDLSHLPL--- 1573

Query: 299  IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND 358
              G N        ML     ++  L+ + + +N I  +G   +S+      +L  L L+ 
Sbjct: 1574 -GGSN------LAMLTQGLSRMTLLQSLRLSRNSIGDLGCCHISEVVRTATSLEELGLSY 1626

Query: 359  NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
            N I   GA  L   L  LP L  ++L    +  AG   +A+ L     LE++ L CN + 
Sbjct: 1627 NQIGDAGAQHLAAILPGLPKLRKIDLSVNGIGMAGGVQLAESLALCRHLEELMLGCNALG 1686

Query: 419  VQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
                L L + +    +LK +++  +  G +GV
Sbjct: 1687 DPTVLGLARELTQ--QLKILHLPSSHLGPKGV 1716



 Score = 44.3 bits (103), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 2/139 (1%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            ML     ++  L+ + + +N I  +G   +S+       L  L L+ N I   GA  L  
Sbjct: 1580 MLTQGLSRMTLLQSLRLSRNSIGDLGCCHISEVVRTATSLEELGLSYNQIGDAGAQHLAA 1639

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             L  LP L  ++L    +  AG   +A+ L     LE++ L CN +     L L + +  
Sbjct: 1640 ILPGLPKLRKIDLSVNGIGMAGGVQLAESLALCRHLEELMLGCNALGDPTVLGLARELTQ 1699

Query: 121  KTKLKQINVSENQFGEEGV 139
              +LK +++  +  G +GV
Sbjct: 1700 --QLKILHLPSSHLGPKGV 1716



 Score = 43.9 bits (102), Expect = 0.17,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 80/194 (41%), Gaps = 10/194 (5%)

Query: 257  LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
            L++ +L ++ +   G   L+  L  C+           L+      N+   EG K L   
Sbjct: 1507 LKKFRLTSSYVSTKGLAHLASGLGPCHH----------LEELDLSNNQFSEEGTKALIGA 1556

Query: 317  FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
             +    L+R+++    +    +  L+        L+ L L+ N+I   G   + + +   
Sbjct: 1557 LEGKCRLKRLDLSHLPLGGSNLAMLTQGLSRMTLLQSLRLSRNSIGDLGCCHISEVVRTA 1616

Query: 377  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
             SL  L L    +  AGA  +A  L     L  ++L+ N I + GG+ L +++     L+
Sbjct: 1617 TSLEELGLSYNQIGDAGAQHLAAILPGLPKLRKIDLSVNGIGMAGGVQLAESLALCRHLE 1676

Query: 437  QINVSENQFGEEGV 450
            ++ +  N  G+  V
Sbjct: 1677 ELMLGCNALGDPTV 1690



 Score = 38.5 bits (88), Expect = 7.7,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 8    KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
            +LK L+   +P  G     +  L+        L+ L L+ N+I   G   + + +    S
Sbjct: 1562 RLKRLDLSHLPLGG---SNLAMLTQGLSRMTLLQSLRLSRNSIGDLGCCHISEVVRTATS 1618

Query: 68   LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
            L  L L    +  AGA  +A  L     L  ++L+ N I + GG+ L +++     L+++
Sbjct: 1619 LEELGLSYNQIGDAGAQHLAAILPGLPKLRKIDLSVNGIGMAGGVQLAESLALCRHLEEL 1678

Query: 128  NVSENQFGEEGV 139
             +  N  G+  V
Sbjct: 1679 MLGCNALGDPTV 1690


>gi|401423736|ref|XP_003876354.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322492596|emb|CBZ27873.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 473

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 42/270 (15%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L  LDLS N  GP G E LA +LR+S    L+ L+L+ N LG TG      A+
Sbjct: 182 ALERNTYLSSLDLSVNELGPSGAECLAGILRTSVSV-LQVLQLHGNYLGPTGVI----AI 236

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            D  +++++      LK    G N   +E A  +AA+ +  +TLE +++  N +   G+ 
Sbjct: 237 CDAVKTNRE------LKRLTLGNNHATDEAAGGIAAMLEANETLEELDIRLNTLTANGVR 290

Query: 340 ALSD-AFEENKNLRHLNLNDNTITYKGAIPLGQALS--KLPSLAILNLGDCLLKSAGASS 396
            ++     +N +L  L+L+ N +   GA  L Q L+  +   L  L+L  C L ++G   
Sbjct: 291 TIAQQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFR 350

Query: 397 IAKYLTDNTTLEDVNLT----------------------------CNEISVQGGLDLVKA 428
           +A  L+ + +L+++NL+                            CN I  +G   L+ A
Sbjct: 351 VASLLSTSISLKEINLSDNALDDEAAARLAQNIMDGITISVVDVSCNNIGEEGASQLIDA 410

Query: 429 MKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
                +L  +  + N       + ++ L++
Sbjct: 411 ALRNARLVALMTNGNSISRVAQKRLDNLLE 440



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 118/304 (38%), Gaps = 81/304 (26%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH--------- 280
           +D  DN  GP G   +A  L SS    + E+ +  N +G  GC  L+  ++         
Sbjct: 81  IDFMDNQLGPTGAAKIASCLESS---PVTEVFICYNDIGKEGCDGLAGVVNVSHSLQVLD 137

Query: 281 ---------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK------------ 319
                    D     +      ALK      NRL+ EGA ++A   ++            
Sbjct: 138 IRGNHLSASDVQRLLRSVSMSTALKRLGLASNRLDPEGAALVAKALERNTYLSSLDLSVN 197

Query: 320 -------------LKT----LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND---- 358
                        L+T    L+ +++  N +   G+ A+ DA + N+ L+ L L +    
Sbjct: 198 ELGPSGAECLAGILRTSVSVLQVLQLHGNYLGPTGVIAICDAVKTNRELKRLTLGNNHAT 257

Query: 359 ------------------------NTITYKGAIPLG-QALSKLPSLAILNLGDCLLKSAG 393
                                   NT+T  G   +  Q L+K  SLA+L+L    +   G
Sbjct: 258 DEAAGGIAAMLEANETLEELDIRLNTLTANGVRTIAQQGLAKNTSLAVLSLSGNEVGPVG 317

Query: 394 ASSIAKYLTDN--TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           A+ + + LT +  + LE ++L+   ++  GG  +   +     LK+IN+S+N   +E   
Sbjct: 318 ANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLLSTSISLKEINLSDNALDDEAAA 377

Query: 452 EMEK 455
            + +
Sbjct: 378 RLAQ 381



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 136/344 (39%), Gaps = 29/344 (8%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   G   L+     +  L+ L++  N ++      L +++S   +L  L L    L 
Sbjct: 113 NDIGKEGCDGLAGVVNVSHSLQVLDIRGNHLSASDVQRLLRSVSMSTALKRLGLASNRLD 172

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI-NVSENQFGEEG 138
             GA+ +AK L  NT L  ++L+ NE+   G   L   ++    + Q+  +  N  G  G
Sbjct: 173 PEGAALVAKALERNTYLSSLDLSVNELGPSGAECLAGILRTSVSVLQVLQLHGNYLGPTG 232

Query: 139 VEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHN 198
           V  +   +K+      L L ++                 D  A G  + L  N++    +
Sbjct: 233 VIAICDAVKTNRELKRLTLGNNHA--------------TDEAAGGIAAMLEANETLEELD 278

Query: 199 ASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALE 258
                  N+  ++     +   L     L  L LS N  GP+G   L  +L S     LE
Sbjct: 279 I----RLNTLTANGVRTIAQQGLAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLE 334

Query: 259 ELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
           +L L++ GL  +G   ++  L           + ++LK      N L++E A  LA    
Sbjct: 335 KLDLSSCGLTASGGFRVASLLS----------TSISLKEINLSDNALDDEAAARLAQNIM 384

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
              T+  V++  N I   G + L DA   N  L  L  N N+I+
Sbjct: 385 DGITISVVDVSCNNIGEEGASQLIDAALRNARLVALMTNGNSIS 428



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 2/144 (1%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK--LRHLNLNDNTITYKGAIPLGQALS 63
             K  +L  + +  N +  VG   L+     +++  L  L+L+   +T  G   +   LS
Sbjct: 297 LAKNTSLAVLSLSGNEVGPVGANELTQVLTSHQRSVLEKLDLSSCGLTASGGFRVASLLS 356

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
              SL  +NL D  L    A+ +A+ + D  T+  V+++CN I  +G   L+ A     +
Sbjct: 357 TSISLKEINLSDNALDDEAAARLAQNIMDGITISVVDVSCNNIGEEGASQLIDAALRNAR 416

Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
           L  +  + N       + ++ L++
Sbjct: 417 LVALMTNGNSISRVAQKRLDNLLE 440


>gi|54294508|ref|YP_126923.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
 gi|53754340|emb|CAH15819.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
          Length = 464

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 179/421 (42%), Gaps = 61/421 (14%)

Query: 34  FEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 93
              N +++ LNL +N I  +GA    +AL+   SL+ LNL    +   GA    K L  N
Sbjct: 40  LNTNPEIKSLNLRNNNIGDEGA----KALAANQSLSTLNLRANNIGDEGA----KALAAN 91

Query: 94  TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAA 153
            +L  +NL+ N I  +G     KA+     L  +N+  N  G+EG + +    +S     
Sbjct: 92  QSLSTLNLSYNNIGAEG----AKALAANQSLSTLNLRANNIGDEGAKALAA-NQSLS--- 143

Query: 154 ALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNT 213
              L        DE     +  ++ S     N+N+   D      A+NQS +  N S+N 
Sbjct: 144 --TLNLRYNNIGDEGAKALAANQSLSTLNLRNNNIG--DEGAKALAANQSLSTLNLSYNN 199

Query: 214 -SNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
              +   +L     L  L+L  N     G + LA         +L  L L+ N +G  G 
Sbjct: 200 IRAEGAKALAANQSLSTLNLRYNNIRAEGAKALA------ANQSLSTLNLSYNNIGDEGA 253

Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
           K L+              +  +L       N + +EGAK LAA     ++L  + +  N 
Sbjct: 254 KALA--------------ANQSLSTLNLSYNNIGDEGAKALAAN----QSLSTLNLSYNN 295

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
           I   G  AL+     N++L  LNL+ N I  +GA    +AL+   SL+ LNL    +   
Sbjct: 296 IGDEGAKALA----ANQSLSTLNLSYNNIRAEGA----KALAANQSLSTLNLSYNNIGDE 347

Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
           GA    K L  N +L  +NL+ N I  +G     KA+     L  +N+S N  G+EG + 
Sbjct: 348 GA----KALAANQSLSTLNLSYNNIRAEG----AKALAANQSLSTLNLSYNNIGDEGAKA 399

Query: 453 M 453
           +
Sbjct: 400 L 400



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           ++L  + +  N I   G  AL+     N+ L  LNL+ N I  +GA    +AL+   SL+
Sbjct: 284 QSLSTLNLSYNNIGDEGAKALA----ANQSLSTLNLSYNNIRAEGA----KALAANQSLS 335

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            LNL    +   GA    K L  N +L  +NL+ N I  +G     KA+     L  +N+
Sbjct: 336 TLNLSYNNIGDEGA----KALAANQSLSTLNLSYNNIRAEG----AKALAANQSLSTLNL 387

Query: 130 SENQFGEEGVEEM 142
           S N  G+EG + +
Sbjct: 388 SYNNIGDEGAKAL 400


>gi|291406721|ref|XP_002719621.1| PREDICTED: nucleotide-binding oligomerization domain containing
           2-like [Oryctolagus cuniculus]
          Length = 491

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 119/244 (48%), Gaps = 23/244 (9%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   +++L+L DN     GV  L ++L+ +  + L+EL +++N LG+ G K++S+ 
Sbjct: 132 IALVSNTTIIKLELEDNCIMEEGVLSLVEMLQEN--YYLQELNISDNDLGLEGAKIISEF 189

Query: 279 LHDCYES-------------------SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L     S                   S+   S   +K      N+  ++G + L  +   
Sbjct: 190 LQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHNQFSDQGGEQLGQMLAL 249

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L+ +++  N  +  G  AL +    N  L+ L+L+ N    +GA+ LG+ L     L
Sbjct: 250 NVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGNEGALALGEVLRLSNCL 309

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
             L++    + + GAS +++ L  N +L  + L+ N I++ G   LV ++K   K++L++
Sbjct: 310 VFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSLNPITMDGATLLVMSIKKNPKSRLEE 369

Query: 438 INVS 441
           +++S
Sbjct: 370 LDIS 373



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 125/307 (40%), Gaps = 58/307 (18%)

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           +NL    L   G  +IA  L  NTT+  + L  N I  +G L LV+ ++    L+++N+S
Sbjct: 115 MNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNIS 174

Query: 131 ENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSH 190
           +N  G EG + + + ++    A++L      G    EE      +   S+ +    NLSH
Sbjct: 175 DNDLGLEGAKIISEFLQR--NASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSH 232

Query: 191 NDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLR 250
           N        S+Q      Q         ++L  G  L  LDLS N F   G   L + LR
Sbjct: 233 NQ------FSDQGGEQLGQ--------MLALNVG--LKSLDLSWNHFHIRGAVALCNGLR 276

Query: 251 SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
           ++    L+ L L+ NG G                                      NEGA
Sbjct: 277 ANV--TLKTLDLSMNGFG--------------------------------------NEGA 296

Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
             L  V +    L  +++  N I + G + LS   E N++LR L L+ N IT  GA  L 
Sbjct: 297 LALGEVLRLSNCLVFLDVSGNDINNDGASKLSRGLEYNESLRVLKLSLNPITMDGATLLV 356

Query: 371 QALSKLP 377
            ++ K P
Sbjct: 357 MSIKKNP 363



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 127/307 (41%), Gaps = 60/307 (19%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           ++ +  +G+   G  A++ A   N  +  L L DN I  +G + L + L +   L  LN+
Sbjct: 114 YMNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNI 173

Query: 74  GDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
            D  L   GA  I+++L  N ++L  + L+ N    +    L +AM +  ++K++N+S N
Sbjct: 174 SDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHN 233

Query: 133 QFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND 192
           QF ++G E++       G   AL                             N  L   D
Sbjct: 234 QFSDQGGEQL-------GQMLAL-----------------------------NVGLKSLD 257

Query: 193 SNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
            + +H      H     +     +++++LKT      LDLS N FG  G   L ++LR S
Sbjct: 258 LSWNH-----FHIRGAVALCNGLRANVTLKT------LDLSMNGFGNEGALALGEVLRLS 306

Query: 253 CCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
            C     L ++ N +   G   LS+ L   Y  S        L+V     N +  +GA +
Sbjct: 307 NCLVF--LDVSGNDINNDGASKLSRGLE--YNES--------LRVLKLSLNPITMDGATL 354

Query: 313 LAAVFKK 319
           L    KK
Sbjct: 355 LVMSIKK 361



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 1/129 (0%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK-LPSLA 69
           T+  +E+  N I   G+ +L +  +EN  L+ LN++DN +  +GA  + + L +   SL 
Sbjct: 139 TIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNISDNDLGLEGAKIISEFLQRNASSLW 198

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L L     K   A+ +++ ++ N  ++ +NL+ N+ S QGG  L + +     LK +++
Sbjct: 199 KLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHNQFSDQGGEQLGQMLALNVGLKSLDL 258

Query: 130 SENQFGEEG 138
           S N F   G
Sbjct: 259 SWNHFHIRG 267



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 29/171 (16%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA- 366
           +G K +A       T+ ++E+  N I   G+ +L +  +EN  L+ LN++DN +  +GA 
Sbjct: 125 KGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQENYYLQELNISDNDLGLEGAK 184

Query: 367 ----------------------------IPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
                                         L QA+S    +  LNL        G   + 
Sbjct: 185 IISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSSNYQIKKLNLSHNQFSDQGGEQLG 244

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           + L  N  L+ ++L+ N   ++G + L   ++    LK +++S N FG EG
Sbjct: 245 QMLALNVGLKSLDLSWNHFHIRGAVALCNGLRANVTLKTLDLSMNGFGNEG 295



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
           F  N    ++NLN + +  KG   +  AL    ++  L L D  +   G  S+ + L +N
Sbjct: 106 FIRNMEEPYMNLNHHGLGPKGTKAIAIALVSNTTIIKLELEDNCIMEEGVLSLVEMLQEN 165

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             L+++N++ N++ ++G   + + + +N + L ++ +S N F EE    + + M S
Sbjct: 166 YYLQELNISDNDLGLEGAKIISEFLQRNASSLWKLKLSGNNFKEESAALLSQAMSS 221


>gi|403288047|ref|XP_003935228.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Saimiri boliviensis boliviensis]
          Length = 953

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 114/238 (47%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L++ L          L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYKIVTF--LGLYNNQITDVGARYITKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  +++  V M  N +   G  A ++A
Sbjct: 784 ---KSLTHLKL-----GKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N I+ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTILSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A++N T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDGGVKVLSEEL-----TKYKIVTFLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K+L  +++ +N I   G   L+ A + ++++  + +  N +  +GA    +A
Sbjct: 776 ITKILDECKSLTHLKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL IL+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTILSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ   +G  ++
Sbjct: 896 QTLKHLWLIQNQITAKGTAQL 916



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 74/141 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +  +  + K+L H+++ +N I   G   L+ A + ++ +  + +  N +  +GA    +A
Sbjct: 776 ITKILDECKSLTHLKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEA 835

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL IL+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTILSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             LK + + +NQ   +G  ++
Sbjct: 896 QTLKHLWLIQNQITAKGTAQL 916



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  +++  V M  N +   G  A ++A   +  L  L+L  N I+ +G   L +A
Sbjct: 804 LALAVKNSRSISDVGMWGNQVGDEGAKAFAEALRNHPSLTILSLASNGISTEGGKSLARA 863

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL IL L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 864 LQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNN 923

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 924 TGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVQELRPCFS---RLTVIRLSVNQITDGGVKVLSEELTKYKIVTFLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           I K L +  +L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 ITKILDECKSLTHLKLGKNKITSEGGKCLALAVKNSRSISDVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837


>gi|291410201|ref|XP_002721391.1| PREDICTED: nucleotide-binding oligomerization domain containing 2
            [Oryctolagus cuniculus]
          Length = 1056

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 17/240 (7%)

Query: 221  LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG-CKLLSKAL 279
            L+   R V L L  N+ G IGVE L       C  A + L L +N +   G CKL+  AL
Sbjct: 802  LRHLRRPVALQLDHNSVGDIGVEQLL-----PCLGACKALYLRDNNISDRGICKLIEHAL 856

Query: 280  HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            H C +  K       L +F    N+L +  A  +A +    +    + +  N I   G  
Sbjct: 857  H-CEQLQK-------LALF---NNKLTDGCAHSVAQLLACKQNFLALRLGNNHITAEGAQ 905

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
             L++   +N +L+ L    N +  KGA  L +ALS   SL  L+L    + S GA ++A 
Sbjct: 906  VLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWLSLVGNNIGSVGAQALAS 965

Query: 400  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             L  N  LE++ L  N +   G   L + +K  + LK + +S N     G E + + + S
Sbjct: 966  MLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSNNCITFVGAEALLQALAS 1025



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 60/129 (46%)

Query: 20   NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
            N I   G   L++   +N  L+ L    N +  KGA  L +ALS   SL  L+L    + 
Sbjct: 897  NHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWLSLVGNNIG 956

Query: 80   SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            S GA ++A  L  N  LE++ L  N +   G   L + +K  + LK + +S N     G 
Sbjct: 957  SVGAQALASMLEKNVALEELCLEENHLQDAGVCSLAEGLKRNSSLKVLKLSNNCITFVGA 1016

Query: 140  EEMEKLMKS 148
            E + + + S
Sbjct: 1017 EALLQALAS 1025



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 13/202 (6%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           +E LKL   G+G   C  L+  L       +    P+AL++     N + + G + L   
Sbjct: 780 VEHLKLTFCGVGPAECAALAFVL-------RHLRRPVALQL---DHNSVGDIGVEQLLPC 829

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
               K L    +  N I   GI  L +     + L+ L L +N +T   A  + Q L+  
Sbjct: 830 LGACKALY---LRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLLACK 886

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
            +   L LG+  + + GA  +A+ L DN++L+ +    N++  +G   L +A+ +   LK
Sbjct: 887 QNFLALRLGNNHITAEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLK 946

Query: 437 QINVSENQFGEEGVEEMEKLMK 458
            +++  N  G  G + +  +++
Sbjct: 947 WLSLVGNNIGSVGAQALASMLE 968



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 4/153 (2%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N I   GI  L +     ++L+ L L +N +T   A  + Q L+   +   L LG+  + 
Sbjct: 841 NNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLLACKQNFLALRLGNNHIT 900

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
           + GA  +A+ L DN++L+ +    N++  +G   L +A+ +   LK +++  N  G  G 
Sbjct: 901 AEGAQVLAEGLRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWLSLVGNNIGSVGA 960

Query: 140 EEMEKLMKSFGMAAALVLED----DEGECSDEE 168
           + +  +++       L LE+    D G CS  E
Sbjct: 961 QALASMLEKNVALEELCLEENHLQDAGVCSLAE 993


>gi|156370329|ref|XP_001628423.1| predicted protein [Nematostella vectensis]
 gi|156215399|gb|EDO36360.1| predicted protein [Nematostella vectensis]
          Length = 426

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 112/233 (48%), Gaps = 18/233 (7%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           +LDL +N     G E  A +L+ +C   + EL L  N +   G K + + +   Y +  +
Sbjct: 68  KLDLEENRLQEEGAESFAKMLKDNCY--ITELNLAGNAMSSRGAKAMGEII--GYSNYIR 123

Query: 289 EGSPLALKVFIAGRNRLENEG---AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
                  K+ ++  N ++ +G   +K LAA      TL+ + +  N     G   L+   
Sbjct: 124 -------KLDLSFNNFIDKDGEALSKGLAATL----TLKELRLSHNSFSESGGELLAPGI 172

Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
             N ++ +L+L+ N +  KGAI + +A+ +  S+ +L+L        GA+++   L  N+
Sbjct: 173 AANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRVLDLSWNGFADDGAAAMGNALRHNS 232

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           TL++++L+ N I+ +G   L K +     L+ + +  N F  +G   + K M+
Sbjct: 233 TLKELDLSHNRITKKGAFALSKGLAVNDALRVLKIGFNPFESDGTMALLKAMR 285



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 69/137 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ + +  N     G   L+     N  + +L+L+ N +  KGAI + +A+ +  S+ +
Sbjct: 149 TLKELRLSHNSFSESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRV 208

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L        GA+++   L  N+TL++++L+ N I+ +G   L K +     L+ + + 
Sbjct: 209 LDLSWNGFADDGAAAMGNALRHNSTLKELDLSHNRITKKGAFALSKGLAVNDALRVLKIG 268

Query: 131 ENQFGEEGVEEMEKLMK 147
            N F  +G   + K M+
Sbjct: 269 FNPFESDGTMALLKAMR 285



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 12/195 (6%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           +LDLS N F     E L+  L  +    L+EL+L++N    +G +LL+  +   Y     
Sbjct: 124 KLDLSFNNFIDKDGEALSKGL--AATLTLKELRLSHNSFSESGGELLAPGIAANY----- 176

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
                +++      N L  +GA  +     +  ++  +++  NG    G  A+ +A   N
Sbjct: 177 -----SVEYLDLSWNHLRMKGAIAICKAMGENASIRVLDLSWNGFADDGAAAMGNALRHN 231

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L+ L+L+ N IT KGA  L + L+   +L +L +G    +S G  ++ K + +N    
Sbjct: 232 STLKELDLSHNRITKKGAFALSKGLAVNDALRVLKIGFNPFESDGTMALLKAMRNNAKSA 291

Query: 409 DVNLTCNEISVQGGL 423
              L  N I+V  G+
Sbjct: 292 MEELHLNNITVGKGV 306



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 61/276 (22%)

Query: 53  KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 112
           +GA+ L +AL+K  ++  L+L +  L+  GA S AK L DN  + ++NL  N +S +G  
Sbjct: 51  RGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELNLAGNAMSSRGAK 110

Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
            + + +     ++++++S N F ++  E + K     G+AA L L++             
Sbjct: 111 AMGEIIGYSNYIRKLDLSFNNFIDKDGEALSK-----GLAATLTLKE------------- 152

Query: 173 SEEENDSDAEGDNSNLSHNDSNHSHN---ASNQSHNNSNQSHNTSNQSHMSLKTG----- 224
                          LSHN  + S     A   + N S +  + S  +H+ +K       
Sbjct: 153 -------------LRLSHNSFSESGGELLAPGIAANYSVEYLDLS-WNHLRMKGAIAICK 198

Query: 225 -----ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK-- 277
                A +  LDLS N F   G   + + LR +    L+EL L++N +   G   LSK  
Sbjct: 199 AMGENASIRVLDLSWNGFADDGAAAMGNALRHNST--LKELDLSHNRITKKGAFALSKGL 256

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
           A++D            AL+V   G N  E++G   L
Sbjct: 257 AVND------------ALRVLKIGFNPFESDGTMAL 280



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 74/133 (55%), Gaps = 6/133 (4%)

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
           +T +S   +  +N + ++L  + +  +GA+ L +AL+K  ++  L+L +  L+  GA S 
Sbjct: 26  VTPISSLLQNIEN-KEISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESF 84

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           AK L DN  + ++NL  N +S +G   + + +     ++++++S N F ++  E + K  
Sbjct: 85  AKMLKDNCYITELNLAGNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSK-- 142

Query: 458 KSFGMAAALVLED 470
              G+AA L L++
Sbjct: 143 ---GLAATLTLKE 152



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 28/174 (16%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
            GA  LA    K  T+E++++ +N +   G  + +   ++N  +  LNL  N ++ +GA 
Sbjct: 51  RGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELNLAGNAMSSRGAK 110

Query: 368 PL------------------------GQALSK----LPSLAILNLGDCLLKSAGASSIAK 399
            +                        G+ALSK      +L  L L       +G   +A 
Sbjct: 111 AMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLTLKELRLSHNSFSESGGELLAP 170

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
            +  N ++E ++L+ N + ++G + + KAM     ++ +++S N F ++G   M
Sbjct: 171 GIAANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRVLDLSWNGFADDGAAAM 224



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           ++  +++  NG    G  A+ +A   N  L+ L+L+ N IT KGA  L + L+   +L +
Sbjct: 205 SIRVLDLSWNGFADDGAAAMGNALRHNSTLKELDLSHNRITKKGAFALSKGLAVNDALRV 264

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 112
           L +G    +S G  ++ K + +N       L  N I+V  G+
Sbjct: 265 LKIGFNPFESDGTMALLKAMRNNAKSAMEELHLNNITVGKGV 306



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 19/270 (7%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           + + +  +G+   G  AL+ A  ++  +  L+L +N +  +GA    + L     +  LN
Sbjct: 39  KEISLAHHGLGPRGAMALARALAKSTTVEKLDLEENRLQEEGAESFAKMLKDNCYITELN 98

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L    + S GA ++ + +  +  +  ++L+ N    + G  L K +     LK++ +S N
Sbjct: 99  LAGNAMSSRGAKAMGEIIGYSNYIRKLDLSFNNFIDKDGEALSKGLAATLTLKELRLSHN 158

Query: 133 QFGEEG-------------VEEMEKLMKSFGMAAALVLEDDEGE-CSDEEQDEESEEEND 178
            F E G             VE ++       M  A+ +    GE  S    D       D
Sbjct: 159 SFSESGGELLAPGIAANYSVEYLDLSWNHLRMKGAIAICKAMGENASIRVLDLSWNGFAD 218

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFG 238
             A    + L HN    +    + SHN   +    +    +++    R++++    N F 
Sbjct: 219 DGAAAMGNALRHNS---TLKELDLSHNRITKKGAFALSKGLAVNDALRVLKIGF--NPFE 273

Query: 239 PIGVEGLADLLRSSCCFALEELKLNNNGLG 268
             G   L   +R++   A+EEL LNN  +G
Sbjct: 274 SDGTMALLKAMRNNAKSAMEELHLNNITVG 303


>gi|440902621|gb|ELR53391.1| Protein NLRC5 [Bos grunniens mutus]
          Length = 1868

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 91/384 (23%), Positives = 156/384 (40%), Gaps = 51/384 (13%)

Query: 78   LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
            + S G + +   L+    LE+++L+ N++  +G   L+ A++ K +LK +++S    G  
Sbjct: 1507 VSSKGLALLTSGLSHCHLLEELDLSNNQLGDEGTEVLLGALEGKCRLKTLDLSHLPLGGS 1566

Query: 138  GVEEMEKLMKSFGMAAALVLE----DDEGEC--SDEEQDEESEEENDSDAEGDNSNLSHN 191
             +  + + +    +  +L L     DD G C  S   +   S EE          +LSH 
Sbjct: 1567 TLAVLTQGLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEE---------LSLSH- 1616

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTG-ARLVELDLSDNAFGPIGVEGLADLLR 250
                            NQ  NT  Q   ++  G   L ++DLS N  GP G   LA+ L 
Sbjct: 1617 ----------------NQIGNTGAQDLAAVLPGLPELRKIDLSANGIGPAGGARLAESL- 1659

Query: 251  SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
             + C  LEEL L  N LG            DC      +G P  L+V     + L  EG 
Sbjct: 1660 -TLCRHLEELMLGCNALG------------DCTALGLAKGLPQHLRVLHLPSSHLSPEGV 1706

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
              L         +E + + +N +   G+      F     LR L+L    I  + A PL 
Sbjct: 1707 LSLGQALDGCPHVEEISLAENSLAG-GVPRFHQGFPV---LRKLDLVSCEIDNQTAKPLA 1762

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             +     +L  + L   LL    A+ +A+ L     L+ ++L  N+I+  G   L + + 
Sbjct: 1763 ASFVLCLALEEIMLSWNLLGDEAAAELARVLPQMGRLKRMDLEKNQITAYGAWLLAEGLA 1822

Query: 431  NKTKLKQINVSENQFGEEGVEEME 454
              + ++ I +  N+   +  + ++
Sbjct: 1823 QGSGIQVIRLWNNRIPPDMAQHLQ 1846



 Score = 48.1 bits (113), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 2/131 (1%)

Query: 9    LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
            +  L+ + + ++ I  VG   LS A      L  L+L+ N I   GA  L   L  LP L
Sbjct: 1578 MTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNTGAQDLAAVLPGLPEL 1637

Query: 69   AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
              ++L    +  AG + +A+ LT    LE++ L CN +     L L K +     L+ ++
Sbjct: 1638 RKIDLSANGIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKGLPQ--HLRVLH 1695

Query: 129  VSENQFGEEGV 139
            +  +    EGV
Sbjct: 1696 LPSSHLSPEGV 1706



 Score = 47.8 bits (112), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 62/138 (44%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +L +       LE +++  N +   G   L  A E   +L+ L+L+   +       L Q
Sbjct: 1514 LLTSGLSHCHLLEELDLSNNQLGDEGTEVLLGALEGKCRLKTLDLSHLPLGGSTLAVLTQ 1573

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             L  +  L  L L    +   G   ++K L   T+LE+++L+ N+I   G  DL   +  
Sbjct: 1574 GLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNTGAQDLAAVLPG 1633

Query: 121  KTKLKQINVSENQFGEEG 138
              +L++I++S N  G  G
Sbjct: 1634 LPELRKIDLSANGIGPAG 1651



 Score = 46.6 bits (109), Expect = 0.028,   Method: Composition-based stats.
 Identities = 76/357 (21%), Positives = 144/357 (40%), Gaps = 25/357 (7%)

Query: 58   LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
            L ++L  + SL  L L    + + G S + + L     LE+V+   N++  +  L++V+ 
Sbjct: 715  LSRSLPTMGSLKKLGLAGSKITAQGISHLVQALPFCPQLEEVSFQDNQLKDREVLNIVEV 774

Query: 118  MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEGECSDEEQDEESEEE 176
            +    +L+++++S N      +  + K+  +      L V E D         + + E +
Sbjct: 775  LSCLPRLQKLDLSRNNVSVSTLLSLTKVAVTCPTIRMLQVRETDLIFLLSPPTETDPELQ 834

Query: 177  NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSH----MSLKTGARLVELDL 232
             D D +G+        +N    A  +S     Q               L+ G +L E+DL
Sbjct: 835  GDPDLQGN--------ANQRKEAQRRSLALRLQKCQLGVHDVEVLIAQLREGPQLDEVDL 886

Query: 233  SDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSP 292
            S N     G + +A+   +     +++L L++N L + G   +   ++ C   ++   S 
Sbjct: 887  SGNQLKDKGCQLMAE--AAPQLHIMKKLDLSDNELSVAGVLGVLSVVNTCQTLTELHISL 944

Query: 293  LALKVFIAGRNRLENEGAKMLAAVFK-----KLKTLERVEMPQNGIYHVGITA-----LS 342
            L   V       LE +      A F      ++ +   +  P+  + H  + A     L 
Sbjct: 945  LHKTVVFTFAPELEEQEGIQKRATFPDSLMFQMSSEPSLRSPRIRLTHCALQAQRLELLC 1004

Query: 343  DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
             A   +  L HL+L+ N +  +G   L + L  L SL  LNL +  L   G  S+ +
Sbjct: 1005 KALGGSCRLSHLDLSGNALGDEGVALLARLLPGLGSLQSLNLSENHLSLEGVCSLTQ 1061



 Score = 42.4 bits (98), Expect = 0.57,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 58/121 (47%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            G+  L+        L  L+L++N +  +G   L  AL     L  L+L    L  +  + 
Sbjct: 1511 GLALLTSGLSHCHLLEELDLSNNQLGDEGTEVLLGALEGKCRLKTLDLSHLPLGGSTLAV 1570

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            + + L   T L+ + L+ + I   G   L KA++  T L+++++S NQ G  G +++  +
Sbjct: 1571 LTQGLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNTGAQDLAAV 1630

Query: 146  M 146
            +
Sbjct: 1631 L 1631



 Score = 42.0 bits (97), Expect = 0.73,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 58/121 (47%)

Query: 337  GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
            G+  L+        L  L+L++N +  +G   L  AL     L  L+L    L  +  + 
Sbjct: 1511 GLALLTSGLSHCHLLEELDLSNNQLGDEGTEVLLGALEGKCRLKTLDLSHLPLGGSTLAV 1570

Query: 397  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
            + + L   T L+ + L+ + I   G   L KA++  T L+++++S NQ G  G +++  +
Sbjct: 1571 LTQGLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNTGAQDLAAV 1630

Query: 457  M 457
            +
Sbjct: 1631 L 1631



 Score = 40.8 bits (94), Expect = 1.6,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 30/186 (16%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVG--------------------------ITALSDAFE 35
            LAAV   L  L  +++  NGI   G                           TAL  A  
Sbjct: 1627 LAAVLPGLPELRKIDLSANGIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKG 1686

Query: 36   ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
              + LR L+L  + ++ +G + LGQAL   P +  ++L +  L    A  + ++      
Sbjct: 1687 LPQHLRVLHLPSSHLSPEGVLSLGQALDGCPHVEEISLAENSL----AGGVPRFHQGFPV 1742

Query: 96   LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
            L  ++L   EI  Q    L  +      L++I +S N  G+E   E+ +++   G    +
Sbjct: 1743 LRKLDLVSCEIDNQTAKPLAASFVLCLALEEIMLSWNLLGDEAAAELARVLPQMGRLKRM 1802

Query: 156  VLEDDE 161
             LE ++
Sbjct: 1803 DLEKNQ 1808


>gi|123437738|ref|XP_001309662.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121891398|gb|EAX96732.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 737

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 144/361 (39%), Gaps = 59/361 (16%)

Query: 82  GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 141
           G   +A  L  N TL ++N+    I+V G   L  A+   T L +++++ N+FG  G  E
Sbjct: 202 GCEELANVLIKNKTLSNLNIATCGITVAGCKLLGPALAQNTSLYKLDLTANRFGGAGALE 261

Query: 142 MEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASN 201
           + K   SFG    L+L  +  +              D+ AE     LS            
Sbjct: 262 LFKHEDSFGCLHTLILSRNAID--------------DTAAEKICQRLS------------ 295

Query: 202 QSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELK 261
                             S KT   L  LDLSDN  G   +  L     +     L  L 
Sbjct: 296 ------------------SCKT---LRVLDLSDNNLGTPFMRNLCTAFSNGA--KLHNLS 332

Query: 262 LNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK 321
           L+ NGL       + K L   +           L+ F    N  +++G +++A    K  
Sbjct: 333 LSKNGLWGESADFI-KILITNFN---------VLRHFDISSNPFKDDGGQIIAESLLKNN 382

Query: 322 TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
            L+ + M    I        +   + +  L+ L LN N IT KG +P+ QAL++  +L+ 
Sbjct: 383 FLKSLNMSDTMIGDESAIKFAQVIQHHPALQRLMLNSNNITDKGGVPMAQALAENTTLSF 442

Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
           + L +  LK    + +   LT   T+ DV++  N+ + +  + L KA++   +    NVS
Sbjct: 443 IGLRNNELKDDAGNELLNALTKGKTVVDVDVANNDFTYRSYVQLAKAIEVHRRELNSNVS 502

Query: 442 E 442
           +
Sbjct: 503 D 503



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 101/244 (41%), Gaps = 10/244 (4%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L    + V LDLS N FG  G E L   +          + L +NG+   G K+  + L 
Sbjct: 120 LTVNRQFVFLDLSLNRFGDRGAEELGRFVAVDPNVIY--IDLRSNGIDCQGMKVFFRGL- 176

Query: 281 DCYESSKKEGSPLALKVFIAG--RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
                     + L L   I G  RN++   G + LA V  K KTL  + +   GI   G 
Sbjct: 177 ----LFNNHITDLDLSA-IDGIERNKIGTHGCEELANVLIKNKTLSNLNIATCGITVAGC 231

Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
             L  A  +N +L  L+L  N     GA+ L +       L  L L    +    A  I 
Sbjct: 232 KLLGPALAQNTSLYKLDLTANRFGGAGALELFKHEDSFGCLHTLILSRNAIDDTAAEKIC 291

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L+   TL  ++L+ N +      +L  A  N  KL  +++S+N    E  + ++ L+ 
Sbjct: 292 QRLSSCKTLRVLDLSDNNLGTPFMRNLCTAFSNGAKLHNLSLSKNGLWGESADFIKILIT 351

Query: 459 SFGM 462
           +F +
Sbjct: 352 NFNV 355



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 54/279 (19%)

Query: 227 LVELDLS------DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           + +LDLS       N  G  G E LA++L  +    L  L +   G+ + GCKLL  AL 
Sbjct: 182 ITDLDLSAIDGIERNKIGTHGCEELANVLIKNK--TLSNLNIATCGITVAGCKLLGPALA 239

Query: 281 D------------------CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
                                E  K E S   L   I  RN +++  A+ +       KT
Sbjct: 240 QNTSLYKLDLTANRFGGAGALELFKHEDSFGCLHTLILSRNAIDDTAAEKICQRLSSCKT 299

Query: 323 LERVEMPQNGIYHVGITALSDAFEE---------NKN-------------------LRHL 354
           L  +++  N +    +  L  AF           +KN                   LRH 
Sbjct: 300 LRVLDLSDNNLGTPFMRNLCTAFSNGAKLHNLSLSKNGLWGESADFIKILITNFNVLRHF 359

Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
           +++ N     G   + ++L K   L  LN+ D ++    A   A+ +  +  L+ + L  
Sbjct: 360 DISSNPFKDDGGQIIAESLLKNNFLKSLNMSDTMIGDESAIKFAQVIQHHPALQRLMLNS 419

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           N I+ +GG+ + +A+   T L  I +  N+  ++   E+
Sbjct: 420 NNITDKGGVPMAQALAENTTLSFIGLRNNELKDDAGNEL 458



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 62/134 (46%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L H ++  N     G   ++++  +N  L+ LN++D  I  + AI   Q +   P+L  
Sbjct: 355 VLRHFDISSNPFKDDGGQIIAESLLKNNFLKSLNMSDTMIGDESAIKFAQVIQHHPALQR 414

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    +   G   +A+ L +NTTL  + L  NE+    G +L+ A+     +  ++V+
Sbjct: 415 LMLNSNNITDKGGVPMAQALAENTTLSFIGLRNNELKDDAGNELLNALTKGKTVVDVDVA 474

Query: 131 ENQFGEEGVEEMEK 144
            N F      ++ K
Sbjct: 475 NNDFTYRSYVQLAK 488



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 5/168 (2%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
            +   + +  L+ L LN N IT KG +P+ QAL++  +L+ + L +  LK    + +   
Sbjct: 402 FAQVIQHHPALQRLMLNSNNITDKGGVPMAQALAENTTLSFIGLRNNELKDDAGNELLNA 461

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE-NQFGEEGVEEMEKLMKS 148
           LT   T+ DV++  N+ + +  + L KA++   +    NVS+  Q   E ++E EK  K 
Sbjct: 462 LTKGKTVVDVDVANNDFTYRSYVQLAKAIEVHRRELNSNVSDAAQKHIEWLKEEEK--KL 519

Query: 149 FGMAAALVLEDDEGECSDEEQDEESEE--ENDSDAEGDNSNLSHNDSN 194
           F   A +  E+   E + EE  ++ E+  E     E + S L    SN
Sbjct: 520 FQCRADIKEEEFAVEDAQEEHRQKVEQLAETKKSKEAEISQLEEQLSN 567



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 6/175 (3%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN----- 357
           NR  + GA+ L         +  +++  NGI   G+         N ++  L+L+     
Sbjct: 134 NRFGDRGAEELGRFVAVDPNVIYIDLRSNGIDCQGMKVFFRGLLFNNHITDLDLSAIDGI 193

Query: 358 -DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
             N I   G   L   L K  +L+ LN+  C +  AG   +   L  NT+L  ++LT N 
Sbjct: 194 ERNKIGTHGCEELANVLIKNKTLSNLNIATCGITVAGCKLLGPALAQNTSLYKLDLTANR 253

Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
               G L+L K   +   L  + +S N   +   E++ + + S      L L D+
Sbjct: 254 FGGAGALELFKHEDSFGCLHTLILSRNAIDDTAAEKICQRLSSCKTLRVLDLSDN 308



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 6/153 (3%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLN------DNTITYKGAIPLGQALSKLPS 67
           ++++  NGI   G+         N  +  L+L+       N I   G   L   L K  +
Sbjct: 156 YIDLRSNGIDCQGMKVFFRGLLFNNHITDLDLSAIDGIERNKIGTHGCEELANVLIKNKT 215

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           L+ LN+  C +  AG   +   L  NT+L  ++LT N     G L+L K   +   L  +
Sbjct: 216 LSNLNIATCGITVAGCKLLGPALAQNTSLYKLDLTANRFGGAGALELFKHEDSFGCLHTL 275

Query: 128 NVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 160
            +S N   +   E++ + + S      L L D+
Sbjct: 276 ILSRNAIDDTAAEKICQRLSSCKTLRVLDLSDN 308


>gi|224177536|ref|NP_083329.2| leucine-rich repeat-containing protein LOC400891 homolog isoform 1
           [Mus musculus]
 gi|123796201|sp|Q14BP6.1|YV012_MOUSE RecName: Full=Leucine-rich repeat-containing protein LOC400891
           homolog
 gi|109732227|gb|AAI15680.1| 4930451C15Rik protein [Mus musculus]
 gi|115528887|gb|AAI15679.1| 4930451C15Rik protein [Mus musculus]
          Length = 391

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 12/221 (5%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
            LDL DN     G E LAD+LR +   +  ++ L+ N +G  G + +  AL         
Sbjct: 109 RLDLRDNGLCGAGAEALADVLRKNSIIS--DVDLSENQIGAAGLQAICTALAL------- 159

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
             +P   K+ + G NRLE + A+ LAA+    + L+ +++  N +  +    L  A  EN
Sbjct: 160 --NPTVEKMQLQG-NRLEEQAAQHLAALLLHHRGLKSLDLSYNQLNDLAGEILGPAVAEN 216

Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
             L  LNL+ N +   GA    + L     L +L++       +GAS+I   L  N  LE
Sbjct: 217 TGLTELNLSWNHLRGLGATAFARGLEANIFLKVLDISHNGFGDSGASAIGDALRVNNVLE 276

Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           ++N+  N ISV G L L   ++    L+ + +S+N    +G
Sbjct: 277 ELNMRNNRISVSGALKLGLGLQVNQTLRILIISKNPIRSDG 317



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 77/161 (47%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           + L+ +++  N +  +    L  A  EN  L  LNL+ N +   GA    + L     L 
Sbjct: 189 RGLKSLDLSYNQLNDLAGEILGPAVAENTGLTELNLSWNHLRGLGATAFARGLEANIFLK 248

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
           +L++       +GAS+I   L  N  LE++N+  N ISV G L L   ++    L+ + +
Sbjct: 249 VLDISHNGFGDSGASAIGDALRVNNVLEELNMRNNRISVSGALKLGLGLQVNQTLRILII 308

Query: 130 SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQD 170
           S+N    +G   + K +++   +A  +L+  + + S E +D
Sbjct: 309 SKNPIRSDGCVGLLKSVRNNKSSALELLDVSDIQVSRECED 349



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 29/186 (15%)

Query: 302 RNR-LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
           R+R L  +G + LA+V      ++R+++  NG+   G  AL+D   +N  +  ++L++N 
Sbjct: 85  RHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLSENQ 144

Query: 361 ITYKGAIPLGQALSKLPSLAILNL-GDCL-----------------LKSAGASS------ 396
           I   G   +  AL+  P++  + L G+ L                 LKS   S       
Sbjct: 145 IGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALLLHHRGLKSLDLSYNQLNDL 204

Query: 397 ----IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
               +   + +NT L ++NL+ N +   G     + ++    LK +++S N FG+ G   
Sbjct: 205 AGEILGPAVAENTGLTELNLSWNHLRGLGATAFARGLEANIFLKVLDISHNGFGDSGASA 264

Query: 453 MEKLMK 458
           +   ++
Sbjct: 265 IGDALR 270



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 63/146 (43%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V +K   +  V++ +N I   G+ A+  A   N  +  + L  N +  + A  L   
Sbjct: 125 LADVLRKNSIISDVDLSENQIGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAAL 184

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L    L       +   + +NT L ++NL+ N +   G     + ++  
Sbjct: 185 LLHHRGLKSLDLSYNQLNDLAGEILGPAVAENTGLTELNLSWNHLRGLGATAFARGLEAN 244

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK +++S N FG+ G   +   ++
Sbjct: 245 IFLKVLDISHNGFGDSGASAIGDALR 270



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%)

Query: 21  GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 80
           G+   G+ AL+     N  ++ L+L DN +   GA  L   L K   ++ ++L +  + +
Sbjct: 88  GLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLSENQIGA 147

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           AG  +I   L  N T+E + L  N +  Q    L   + +   LK +++S NQ 
Sbjct: 148 AGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALLLHHRGLKSLDLSYNQL 201


>gi|440906587|gb|ELR56835.1| Ribonuclease inhibitor, partial [Bos grunniens mutus]
          Length = 460

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 171/420 (40%), Gaps = 66/420 (15%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
           K++ L+L +  +T  G   L   L  LP+L  L+L D  L  AG   + + L D    LE
Sbjct: 85  KIQKLSLQNCCLTEAGCGALPGVLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCRLE 144

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
            + L    ++      L   ++    LK++ VS N  GE GV+ + +     G+A     
Sbjct: 145 KLQLEYCSLTAASCEPLAAVLRATRDLKELVVSNNDIGEAGVQALCR-----GLA----- 194

Query: 158 EDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS 217
              E  C  E    E                         N    + N  +     ++Q 
Sbjct: 195 ---ESACQLETLKLE-------------------------NCGLTAANCKDLCGIVASQ- 225

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFALEELKLNNNGLGITGCKLLS 276
                  A L +LDL  N  G  G+  L   LL  S    L  L L    L ++GC+ L 
Sbjct: 226 -------ASLKDLDLGSNRLGDAGLAELCPGLLSPS--SQLRTLWLWECDLTVSGCRDLC 276

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYH 335
           + L        KE    ALK      N L +EGA++L  ++ +    LE + +   G   
Sbjct: 277 RVLQ------AKE----ALKELSLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTA 326

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAG 393
                 S    +NK+L  L L+ N +   G   L QAL + P   L +L +GDC L ++ 
Sbjct: 327 ACCQHFSSVLTQNKHLLELQLSSNPLGDAGVHVLCQALGQ-PGTVLRVLWVGDCELTNSS 385

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEE 452
              +A  L  + +L +++L+ N +   G L L+ +++     L+Q+ V  + +  E V+E
Sbjct: 386 CGGLASLLLASPSLRELDLSNNGLGDPGVLQLLGSLEQPACSLEQL-VLYDIYWTEAVDE 444



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 25/255 (9%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
            ++ +L L +      G   L  +LRS     L EL L++N LG  G +LL + L D   
Sbjct: 84  CKIQKLSLQNCCLTEAGCGALPGVLRSL--PTLRELHLSDNPLGDAGLRLLCEGLLD--P 139

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
             + E   L      A          + LAAV +  + L+ + +  N I   G+ AL   
Sbjct: 140 QCRLEKLQLEYCSLTAA-------SCEPLAAVLRATRDLKELVVSNNDIGEAGVQALCRG 192

Query: 345 FEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK-YLT 402
             E+   L  L L +  +T      L   ++   SL  L+LG   L  AG + +    L+
Sbjct: 193 LAESACQLETLKLENCGLTAANCKDLCGIVASQASLKDLDLGSNRLGDAGLAELCPGLLS 252

Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE----------- 451
            ++ L  + L   +++V G  DL + ++ K  LK+++++ N  G+EG +           
Sbjct: 253 PSSQLRTLWLWECDLTVSGCRDLCRVLQAKEALKELSLAGNSLGDEGAQLLCESLLQPGC 312

Query: 452 EMEKL-MKSFGMAAA 465
           ++E L +KS G  AA
Sbjct: 313 QLESLWVKSCGFTAA 327



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 14/167 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQ 60
           LAAV +  + L+ + +  N I   G+ AL     E+  +L  L L +  +T      L  
Sbjct: 161 LAAVLRATRDLKELVVSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCG 220

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
            ++   SL  L+LG   L  AG + +    L+ ++ L  + L   +++V G  DL + ++
Sbjct: 221 IVASQASLKDLDLGSNRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRDLCRVLQ 280

Query: 120 NKTKLKQINVSENQFGEEGVE-----------EMEKL-MKSFGMAAA 154
            K  LK+++++ N  G+EG +           ++E L +KS G  AA
Sbjct: 281 AKEALKELSLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTAA 327


>gi|281354613|gb|EFB30197.1| hypothetical protein PANDA_007922 [Ailuropoda melanoleuca]
          Length = 902

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 83/156 (53%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + G K+L     K K L  + +  N I  VG   ++   +E K L HL L +N IT
Sbjct: 738 NQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGENKIT 797

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +G   L  A+    S+  + +    +   GA++ A+ L ++ +L +++L  N IS +GG
Sbjct: 798 SEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGISTEGG 857

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             L +A+++ T L+   +++N+  +E  E + +++K
Sbjct: 858 KSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLK 893



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 75/140 (53%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K K L  + +  N I  VG   ++   +E K L HL L +N IT +G   L  A+    S
Sbjct: 754 KYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKS 813

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           +  + +    +   GA++ A+ L ++ +L +++L  N IS +GG  L +A+++ T L+  
Sbjct: 814 IFEIGMWGNRIGDEGATAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIF 873

Query: 128 NVSENQFGEEGVEEMEKLMK 147
            +++N+  +E  E + +++K
Sbjct: 874 WLTKNELNDEVAESLAEMLK 893



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 11/186 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +  +G K+L       YE   K      L ++    N++ + GA+ 
Sbjct: 726 CFSCLTVIRLSVNQITDSGVKVL-------YEELTKYKILTFLGLY---NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +A +  + K L  +++ +N I   G   L+ A + +K++  + +  N I  +GA    +A
Sbjct: 776 IARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NTTL    LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLKVN 895

Query: 433 TKLKQI 438
             LK +
Sbjct: 896 QTLKHL 901



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 63/126 (50%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  + K L H+++ +N I   G   L+ A + +K +  + +  N I  +GA    +A
Sbjct: 776 IARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEA 835

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    + + G  S+A+ L  NTTL    LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKSLAQALQHNTTLRIFWLTKNELNDEVAESLAEMLKVN 895

Query: 122 TKLKQI 127
             LK +
Sbjct: 896 QTLKHL 901



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     L  + L+ N IT  G   L + L+K   L  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---CLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           IA+ L +   L  + L  N+I+ +GG  L  A+KN   + +I +  N+ G+EG     + 
Sbjct: 776 IARILDECKGLTHLKLGENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           + L+ N IT  G   L + L+K   L  L L +  +   GA  IA+ L +   L  + L 
Sbjct: 733 IRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLG 792

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N+I+ +GG  L  A+KN   + +I +  N+ G+EG     + ++
Sbjct: 793 ENKITSEGGKCLALAVKNSKSIFEIGMWGNRIGDEGATAFAEALR 837


>gi|300704275|ref|YP_003745878.1| leucine-rich-repeat type III effector protein (gala6) [Ralstonia
           solanacearum CFBP2957]
 gi|299071939|emb|CBJ43268.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
           solanacearum CFBP2957]
          Length = 519

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 191/487 (39%), Gaps = 106/487 (21%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHL--------NLNDNTITYKGAIP 57
           FK   TLE ++    G+ H+ I+  +     N  L HL        +LN   I  +GA  
Sbjct: 41  FKGELTLEALKALPPGVEHLDISRCTGRGVSNAGLAHLATRPLKSLSLNGIEIDAEGA-- 98

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
             + L+   SL  L+L  C +    A+++A+    + ++  ++L+ N I   G   L  A
Sbjct: 99  --RLLATCASLTSLSLTGCSIGDRAATALAQ----SRSIASLDLSVNMIGPDGARALASA 152

Query: 118 -------------------MKNKTKLKQINVSENQFGEEGVEEME--KLMKSFGMAAALV 156
                              +     LK +N S N  G+ GV       ++    +A  ++
Sbjct: 153 PLVSLNLHNNGIGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMI 212

Query: 157 LEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQ 216
                           +   N S  E D S     D+     A ++S             
Sbjct: 213 ----------GPAGARALRRNTSLTELDLSTNRLGDAGAQALAGSRS------------- 249

Query: 217 SHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLL- 275
                     L  L++  N  G  G E LA   R++    L+ L L+ N +G  G   L 
Sbjct: 250 ----------LTSLNVRSNEIGDDGTEALA---RNTT---LKSLNLSYNPIGFWGAGALG 293

Query: 276 -SKALHD----CYESSKKEGSPLALKVFIA----GRNRLENEGAKMLAAVFKKLKTLERV 326
            S  L +    C        S LA    +A    G NR+ ++GA+ LA      +TL  +
Sbjct: 294 GSTTLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIGDDGARALATS----RTLTLL 349

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
           ++ +N I+  G  AL+     N +L  LNL  N +   GA     AL++ P L  LNLG 
Sbjct: 350 DLSRNNIHDAGAQALAG----NGSLTSLNLYGNEVDDDGA----AALAQHPRLTSLNLGR 401

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
             +   GA  +AK    + TL +++L+ N +  +G     +A+   T L  +NVS+N  G
Sbjct: 402 NRIGPNGAQHLAK----SATLTELDLSENRLGPEG----AEALSLSTVLTTLNVSDNAIG 453

Query: 447 EEGVEEM 453
           E G    
Sbjct: 454 EAGARAF 460



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 173/424 (40%), Gaps = 86/424 (20%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A    + +++  +++  N I   G  AL+ A      L  LNL++N I  +GA+    AL
Sbjct: 122 ATALAQSRSIASLDLSVNMIGPDGARALASA-----PLVSLNLHNNGIGDEGAL----AL 172

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
           +   +L  LN  +  +  AG    A    DNT L  +NL  N I   G     +A++  T
Sbjct: 173 ATSGTLKSLNASNNGIGDAGVLGFA----DNTVLTQLNLAGNMIGPAG----ARALRRNT 224

Query: 123 KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAE 182
            L ++++S N+ G+ G + +                   G  S    +  S E  D   E
Sbjct: 225 SLTELDLSTNRLGDAGAQALA------------------GSRSLTSLNVRSNEIGDDGTE 266

Query: 183 GDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGV 242
               N +    N S+N                     +L     L ELDL   A  P G 
Sbjct: 267 ALARNTTLKSLNLSYNP-------------IGFWGAGALGGSTTLRELDLRCCAIDPYGA 313

Query: 243 EGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA------------LHDC-YESSKKE 289
             LA   R++   +L  L L +N +G  G + L+ +            +HD   ++    
Sbjct: 314 SALA---RNT---SLASLHLGSNRIGDDGARALATSRTLTLLDLSRNNIHDAGAQALAGN 367

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE--RVEMPQNGIYHVGITALSDAFEE 347
           GS  +L ++    N ++++GA  LA    +L +L   R  +  NG  H+  +A       
Sbjct: 368 GSLTSLNLY---GNEVDDDGAAALAQ-HPRLTSLNLGRNRIGPNGAQHLAKSA------- 416

Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
              L  L+L++N +  +GA    +ALS    L  LN+ D  +  AGA + A+  T  T+L
Sbjct: 417 --TLTELDLSENRLGPEGA----EALSLSTVLTTLNVSDNAIGEAGARAFAEKSTSLTSL 470

Query: 408 EDVN 411
           +  N
Sbjct: 471 DARN 474



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 28/189 (14%)

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           L +TGC +  +A     +S  +  + L L V     N +  +GA+ LA+       L  +
Sbjct: 110 LSLTGCSIGDRAATALAQS--RSIASLDLSV-----NMIGPDGARALASA-----PLVSL 157

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
            +  NGI   G  AL+     +  L+ LN ++N I   G   LG A + +  L  LNL  
Sbjct: 158 NLHNNGIGDEGALALA----TSGTLKSLNASNNGIGDAGV--LGFADNTV--LTQLNLAG 209

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
            ++  AGA    + L  NT+L +++L+ N +   G     +A+     L  +NV  N+ G
Sbjct: 210 NMIGPAGA----RALRRNTSLTELDLSTNRLGDAG----AQALAGSRSLTSLNVRSNEIG 261

Query: 447 EEGVEEMEK 455
           ++G E + +
Sbjct: 262 DDGTEALAR 270


>gi|109066981|ref|XP_001085719.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1-like [Macaca mulatta]
          Length = 953

 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N ++ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A++N T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ   +G  ++
Sbjct: 896 QTLKHLWLIQNQITAKGTAQL 916



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEM 142
           K + + +NQ   +G  ++
Sbjct: 899 KHLWLIQNQITAKGTAQL 916



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  K++  V M  N +   G  A ++A   +  L  L+L  N ++ +G   L +A
Sbjct: 804 LALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARA 863

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL IL L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 864 LQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNN 923

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 924 TGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFS---RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     +R   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFSRLTVIR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|428179394|gb|EKX48265.1| hypothetical protein GUITHDRAFT_136783 [Guillardia theta CCMP2712]
          Length = 502

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 173/421 (41%), Gaps = 61/421 (14%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
           LNL D+ I  +GA  L QAL++   ++  L L    +   G S ++  LT    L  ++L
Sbjct: 114 LNLVDSHIKREGAESLSQALARCGGTIKRLELDGNYVGRMGISRLSVALTHCRNLTFLSL 173

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE--- 158
             N I  +G   LV ++     L+ +++S N  G EG  ++  ++    M   L+L    
Sbjct: 174 GRNLIGDKGIGHLVSSLLF-CPLQHLDLSINYIGAEGAAKLASVLPHLSMLEVLILFGNP 232

Query: 159 -DDEG---------ECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSN 208
             DEG         +C   ++ + S   N   AEG                         
Sbjct: 233 LKDEGVEKISKVLLQCFLLQRLDLSV--NGIGAEG------------------------- 265

Query: 209 QSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLG 268
                + +  ++L +  RL  L+L  NA G +GV+ L+    +  C A+ EL L+ N + 
Sbjct: 266 -----AGRLALALPSCTRLRSLNLRGNALGDLGVKLLS--WATPQCLAMTELDLSRNSIT 318

Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
             G   L + L             + + + +AG N L  EGA  LA   K   +L R+E+
Sbjct: 319 ADGASSLCRKLV----------PDVIVNLDLAG-NFLGEEGAMALALSLKSCTSLSRLEL 367

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
            +  +   GI  L      N++L HL L  N I   G   L   LS +  L  L+L    
Sbjct: 368 SRCRLGCQGIKRLI-PLRHNQSLSHLGLGLNDIGDSGVEALLPCLSDMHCLKWLDLCGNG 426

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           +   GAS +    T   +LE +NL  N  S+ G   L KA K    L+ + +      +E
Sbjct: 427 ITDQGASLLCSQFTSLLSLETLNLGGNNFSLAGVDKLRKAAKEARSLRTLIIGSEGNWDE 486

Query: 449 G 449
           G
Sbjct: 487 G 487



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 152/375 (40%), Gaps = 40/375 (10%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L+      + L  + + +N I   GI  L  +      L+HL+L+ N I  +GA  L   
Sbjct: 158 LSVALTHCRNLTFLSLGRNLIGDKGIGHLVSSLLFCP-LQHLDLSINYIGAEGAAKLASV 216

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L  L  L +L L    LK  G   I+K L     L+ ++L+ N I  +G   L  A+ + 
Sbjct: 217 LPHLSMLEVLILFGNPLKDEGVEKISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSC 276

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDA 181
           T+L+ +N+  N  G+ GV+     + S+     L +             E     N   A
Sbjct: 277 TRLRSLNLRGNALGDLGVK-----LLSWATPQCLAMT------------ELDLSRNSITA 319

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
           +G +S       +   N     +    +    +    +SLK+   L  L+LS    G  G
Sbjct: 320 DGASSLCRKLVPDVIVNLDLAGNFLGEEG---AMALALSLKSCTSLSRLELSRCRLGCQG 376

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           ++ L  L  +    +L  L L  N +G +G + L   L D +           LK     
Sbjct: 377 IKRLIPLRHNQ---SLSHLGLGLNDIGDSGVEALLPCLSDMH----------CLKWLDLC 423

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL------N 355
            N + ++GA +L + F  L +LE + +  N     G+  L  A +E ++LR L      N
Sbjct: 424 GNGITDQGASLLCSQFTSLLSLETLNLGGNNFSLAGVDKLRKAAKEARSLRTLIIGSEGN 483

Query: 356 LNDNTITYKGAIPLG 370
            ++ +     A+P G
Sbjct: 484 WDEGSGLLSVALPCG 498



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 20/252 (7%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
           + G  +  L+L  N  G +G+  L+  L    C  L  L L  N +G  G   L  +L  
Sbjct: 135 RCGGTIKRLELDGNYVGRMGISRLSVALTH--CRNLTFLSLGRNLIGDKGIGHLVSSLLF 192

Query: 282 C-------------YESSKKEGSPLA----LKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
           C              E + K  S L     L+V I   N L++EG + ++ V  +   L+
Sbjct: 193 CPLQHLDLSINYIGAEGAAKLASVLPHLSMLEVLILFGNPLKDEGVEKISKVLLQCFLLQ 252

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
           R+++  NGI   G   L+ A      LR LNL  N +   G   L  A  +  ++  L+L
Sbjct: 253 RLDLSVNGIGAEGAGRLALALPSCTRLRSLNLRGNALGDLGVKLLSWATPQCLAMTELDL 312

Query: 385 GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
               + + GASS+ + L  +  + +++L  N +  +G + L  ++K+ T L ++ +S  +
Sbjct: 313 SRNSITADGASSLCRKLVPDVIV-NLDLAGNFLGEEGAMALALSLKSCTSLSRLELSRCR 371

Query: 445 FGEEGVEEMEKL 456
            G +G++ +  L
Sbjct: 372 LGCQGIKRLIPL 383



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 28/175 (16%)

Query: 305 LENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNL------------ 351
           ++ EGA+ L+    +   T++R+E+  N +  +GI+ LS A    +NL            
Sbjct: 121 IKREGAESLSQALARCGGTIKRLELDGNYVGRMGISRLSVALTHCRNLTFLSLGRNLIGD 180

Query: 352 ---------------RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
                          +HL+L+ N I  +GA  L   L  L  L +L L    LK  G   
Sbjct: 181 KGIGHLVSSLLFCPLQHLDLSINYIGAEGAAKLASVLPHLSMLEVLILFGNPLKDEGVEK 240

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           I+K L     L+ ++L+ N I  +G   L  A+ + T+L+ +N+  N  G+ GV+
Sbjct: 241 ISKVLLQCFLLQRLDLSVNGIGAEGAGRLALALPSCTRLRSLNLRGNALGDLGVK 295


>gi|326435604|gb|EGD81174.1| hypothetical protein PTSG_13152 [Salpingoeca sp. ATCC 50818]
          Length = 1473

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 41/221 (18%)

Query: 13  EHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 72
           E  ++   G+  +G  A+++A ++N  L+ L L++N+I  +GA+ L + L    +L  L 
Sbjct: 41  EIADLYDAGLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELF 100

Query: 73  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
           L +  +   GA ++A+ L  NTTL+ ++L  N I  +G + L + +K+ T LKQ+++++N
Sbjct: 101 LYNNSIGDEGAVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKN 160

Query: 133 QFGEEGVEEMEKLM-------------------KSFGMAAALVLE-------DDEGECSD 166
                G   +   +                   ++FG A  +  E       DDEG+ + 
Sbjct: 161 SITPVGGAALGAALDQNRTLSRLEINKNSTATARAFGAALPVDRELYTDWSGDDEGKAAF 220

Query: 167 EEQDEESEEEN--------DSDA-------EGDNSNLSHND 192
            E  EE + ++        D DA       E DN++++  D
Sbjct: 221 NEAREEKKRQHEQLFAACRDGDASVVTSLMEQDNADINQQD 261



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 71/135 (52%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           GA+ +A   K    L+R+ +  N I   G  AL++  + N  L+ L L +N+I  +GA+ 
Sbjct: 54  GARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFLYNNSIGDEGAVA 113

Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
           L + L    +L  L+L    +   GA ++A+ L  NT L+ ++LT N I+  GG  L  A
Sbjct: 114 LAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKNSITPVGGAALGAA 173

Query: 429 MKNKTKLKQINVSEN 443
           +     L ++ +++N
Sbjct: 174 LDQNRTLSRLEINKN 188



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 73/126 (57%)

Query: 324 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
           E  ++   G+  +G  A+++A ++N  L+ L L++N+I  +GA+ L + L    +L  L 
Sbjct: 41  EIADLYDAGLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELF 100

Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
           L +  +   GA ++A+ L  NTTL+ ++L  N I  +G + L + +K+ T LKQ+++++N
Sbjct: 101 LYNNSIGDEGAVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKN 160

Query: 444 QFGEEG 449
                G
Sbjct: 161 SITPVG 166



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 11/201 (5%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEEL-KLNNNGLGITGCKLLSK 277
           MS K   R VE  L+         + + D +R+       E+  L + GLG+ G + +++
Sbjct: 1   MSEKRARREVEALLAQTKLPAKKEKRVKDKIRAIANNTCGEIADLYDAGLGVIGARAVAE 60

Query: 278 ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
           AL D             LK      N + +EGA  LA + K   TL+ + +  N I   G
Sbjct: 61  ALKD----------NTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFLYNNSIGDEG 110

Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
             AL++  + N  L+ L+L+ N+I  +GA+ L + L    +L  L+L    +   G +++
Sbjct: 111 AVALAEMLKHNTTLKRLDLDGNSIGPEGAVALAEMLKHNTALKQLHLTKNSITPVGGAAL 170

Query: 398 AKYLTDNTTLEDVNLTCNEIS 418
              L  N TL  + +  N  +
Sbjct: 171 GAALDQNRTLSRLEINKNSTA 191



 Score = 47.4 bits (111), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 45/78 (57%)

Query: 381 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
           I +L D  L   GA ++A+ L DNT L+ + L  N I  +G + L + +K+ T LK++ +
Sbjct: 42  IADLYDAGLGVIGARAVAEALKDNTCLKRLYLDNNSIGDEGAVALAEMLKHNTTLKELFL 101

Query: 441 SENQFGEEGVEEMEKLMK 458
             N  G+EG   + +++K
Sbjct: 102 YNNSIGDEGAVALAEMLK 119


>gi|320167871|gb|EFW44770.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 215

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 5/198 (2%)

Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           L ++  HD Y    K    L+L    AG       GA  +A   K    +  +++ QN I
Sbjct: 2   LATQRQHDLYHQVTKASGWLSLWQSEAG-----CAGAMAVAEALKVNTAVTGLDLYQNQI 56

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G  A+++A + N  +  L+L +N I   GA    +AL    S+  L L    +  AG
Sbjct: 57  GDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAG 116

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           A +IA+ +  NTTL  ++L  N+I   G   + +A++  T + Q+++  NQ G+ G + +
Sbjct: 117 AQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDIGAQAI 176

Query: 454 EKLMKSFGMAAALVLEDD 471
            + +K      ++ LED+
Sbjct: 177 AEALKVNKTLTSIRLEDN 194



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 80/154 (51%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ +EGA+ +A   K   T+  +++ +N I   G  A ++A + NK++  L L  N I
Sbjct: 53  QNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRI 112

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +A+    +L  L+L    +  AGA +IA+ L  NTT+  ++L  N+I   G
Sbjct: 113 GDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDIG 172

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
              + +A+K    L  I + +N   E G+  + +
Sbjct: 173 AQAIAEALKVNKTLTSIRLEDNFLTEAGITALRE 206



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 77/146 (52%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +++ QN I   G  A+++A + N  +  L+L +N I   GA    +AL    S+  L L 
Sbjct: 49  LDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLW 108

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              +  AGA +IA+ +  NTTL  ++L  N+I   G   + +A++  T + Q+++  NQ 
Sbjct: 109 VNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQI 168

Query: 135 GEEGVEEMEKLMKSFGMAAALVLEDD 160
           G+ G + + + +K      ++ LED+
Sbjct: 169 GDIGAQAIAEALKVNKTLTSIRLEDN 194



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 67/122 (54%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A+++A + N  +  L+L  N I  +GA  + +AL    ++A+L+L +  +  AGA +
Sbjct: 32  GAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAEA 91

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            A+ L  N ++ ++ L  N I   G   + +A+   T L ++++ +NQ G+ G + + + 
Sbjct: 92  FAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEA 151

Query: 146 MK 147
           ++
Sbjct: 152 LR 153



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  +++ +N I   G  A ++A + NK +  L L  N I   GA  + +A
Sbjct: 64  IAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARA 123

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +    +L  L+L    +  AGA +IA+ L  NTT+  ++L  N+I   G   + +A+K  
Sbjct: 124 IVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDIGAQAIAEALKVN 183

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
             L  I + +N   E G+  + +
Sbjct: 184 KTLTSIRLEDNFLTEAGITALRE 206



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 28/198 (14%)

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           AGA ++A+ L  NT +  ++L  N+I  +G   + +A+K  T +  +++ ENQ G+ G E
Sbjct: 31  AGAMAVAEALKVNTAVTGLDLYQNQIGDEGAQAIAEALKVNTTVAVLDLRENQIGDAGAE 90

Query: 141 EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS--HNDSNHSHN 198
              + +K       L L  +        +  ++  +  + A   N+ L+  H   N   +
Sbjct: 91  AFAEALKVNKSVVELYLWVN--------RIGDAGAQAIARAIVVNTTLTKLHLYQNQIGD 142

Query: 199 ASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALE 258
           A  Q+   + + + T NQ             LDL  N  G IG + +A+ L+ +    L 
Sbjct: 143 AGAQAIAEALRVNTTVNQ-------------LDLWANQIGDIGAQAIAEALKVNKT--LT 187

Query: 259 ELKLNNNGL---GITGCK 273
            ++L +N L   GIT  +
Sbjct: 188 SIRLEDNFLTEAGITALR 205


>gi|22003870|ref|NP_665826.1| NACHT, LRR and PYD domains-containing protein 3 [Mus musculus]
 gi|29427844|sp|Q8R4B8.1|NALP3_MOUSE RecName: Full=NACHT, LRR and PYD domains-containing protein 3;
            AltName: Full=Cold autoinflammatory syndrome 1 protein
            homolog; AltName: Full=Cryopyrin; AltName: Full=Mast cell
            maturation-associated-inducible protein 1; AltName:
            Full=PYRIN-containing APAF1-like protein 1
 gi|19548956|gb|AAL90874.1|AF486632_1 mast cell maturation inducible protein 1 [Mus musculus]
 gi|37791048|gb|AAR03540.1| cryopyrin [Mus musculus]
 gi|37791057|gb|AAR03541.1| cryopyrin [Mus musculus]
 gi|37791066|gb|AAR03542.1| cryopyrin [Mus musculus]
 gi|37791075|gb|AAR03543.1| cryopyrin [Mus musculus]
 gi|38231683|gb|AAR14737.1| NALP3 [Mus musculus]
 gi|45686265|gb|AAS75794.1| cryopyrin [Mus musculus]
 gi|45686267|gb|AAS75795.1| cryopyrin [Mus musculus]
 gi|94574398|gb|AAI16175.1| NLR family, pyrin domain containing 3 [Mus musculus]
          Length = 1033

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 109/251 (43%), Gaps = 16/251 (6%)

Query: 210  SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
            SH         L +  +LVELDLSDNA G  G+  L        C  L+ L  N   L +
Sbjct: 780  SHQCCFDISSVLSSSQKLVELDLSDNALGDFGIRLL--------CVGLKHLLCNLQKLWL 831

Query: 270  TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
              C L S     C + +    S  +L     G N L + G ++L    K  +  L+++ +
Sbjct: 832  VSCCLTSAC---CQDLALVLSSNHSLTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGL 888

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+  +  +AL+   + N+N  HL L  N +   G   L + L   P   L +L L +
Sbjct: 889  VNSGLTSICCSALTSVLKTNQNFTHLYLRSNALGDTGLRLLCEGLLH-PDCKLQMLELDN 947

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S    +++  LT N +L  +NL  N++     + L + +K +  L Q + + E   
Sbjct: 948  CSLTSHSCWNLSTILTHNHSLRKLNLGNNDLGDLCVVTLCEVLKQQGCLLQSLQLGEMYL 1007

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1008 NRETKRALEAL 1018


>gi|399497874|emb|CCG20265.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 122/292 (41%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        + A+ +  
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEA----ANAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S++K      LKV     N   +EGA  +A + K+   LE        +   G + L +
Sbjct: 267 PSTEK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANALKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  +  
Sbjct: 381 SAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 441 LIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +   GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSGGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVGSGGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|355747741|gb|EHH52238.1| Caspase recruitment domain-containing protein 4 [Macaca
           fascicularis]
          Length = 953

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N ++ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A++N T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ   +G  ++
Sbjct: 896 QTLKHLWLIQNQITAKGTAQL 916



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEM 142
           K + + +NQ   +G  ++
Sbjct: 899 KHLWLIQNQITAKGTAQL 916



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  K++  V M  N +   G  A ++A   +  L  L+L  N ++ +G   L +A
Sbjct: 804 LALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARA 863

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL IL L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 864 LQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNN 923

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 924 TGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     +R   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFSRLTVIR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|399498022|emb|CCG20339.1| Ran GTPase activating protein 2 [Solanum sparsipilum]
          Length = 553

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 122/292 (41%), Gaps = 69/292 (23%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY 283
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        + A+ +  
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEA----ANAVSELV 266

Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
            S+KK      LKV     N   +EGA  +A + K+   LE        +   G + L +
Sbjct: 267 PSTKK------LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCE 320

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSK---------------------------- 375
           A     +L+ L+L DN    +  + L +ALSK                            
Sbjct: 321 ALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSYLNLEDEGAIAIANSLKD 380

Query: 376 -LPSLAIL----------------------------NLGDCLLKSAGASSIAKYLTDNTT 406
             PSLA+L                            +LG+  LK  GA  IAK L  ++ 
Sbjct: 381 SAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSH 440

Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           L +V+++ N +   G   L + + +K + K +NV+ N   E GV+E++++ K
Sbjct: 441 LIEVDMSSNALRRAGARVLAQTVLHKEEFKLLNVNGNFISEVGVDELKEIFK 492



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKEEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   E GV+E++++ K
Sbjct: 473 NVNGNFISEVGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTKKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTKK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     KKL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTKKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|399498034|emb|CCG20345.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG----CKLLS--- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+        C+L+    
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAVNAVCELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +G I +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGVIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  I K L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIVKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G+ A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GVIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            I K L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIVKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSK-------------------------LPS--- 378
           E  NL+ LNL+DN +  KG    G+ L                           +PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAVNAVCELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/126 (21%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ +    + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAVNAVCELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 60/128 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI    + A+ +     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAVNAVCELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+     L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIYLSY 363

Query: 132 NQFGEEGV 139
               +EGV
Sbjct: 364 LNLEDEGV 371


>gi|440795520|gb|ELR16640.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 635

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 36/268 (13%)

Query: 235 NAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES--------- 285
           N  GP G   LAD L+ +    +E L L  N +G  G K L++ L    ++         
Sbjct: 120 NDIGPKGAAALADSLKENKT--VEALWLKRNSIGPEGAKSLARVLAGDNDALLLLDLVFN 177

Query: 286 --SKKEGSPLA---------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
               + G  LA         L+V   G N L   G+  LA   +  + L+ + +  N + 
Sbjct: 178 KIGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHNRVLQELYLDVNDMG 237

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLG------- 385
             G  A +     N  LR L L  N I   GA  L +AL   P  +L +LNLG       
Sbjct: 238 DEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSALQMLNLGYQKSTVV 297

Query: 386 ----DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
                  +  AG +++A+ L  N TL  +NL  N+++  G   L +A+ +   L+ + + 
Sbjct: 298 MGGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGRALASNRSLRVLELR 357

Query: 442 EN-QFGEEGVEEMEKLMKSFGMAAALVL 468
            N Q G++GV ++   M +    AAL L
Sbjct: 358 ANYQLGDDGVVDLLDAMATNDTLAALDL 385



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 31/235 (13%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLA-LKVFIAGRNRLENEGAKMLA 314
           A+ ++ L    LG  G + L+ AL           +PLA  +  + G + +  EGA  +A
Sbjct: 44  AVNKIDLCKQFLGPEGAQTLADALTRASLHGDAPPTPLASARSVLLGADEIGPEGAMAIA 103

Query: 315 AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL----- 369
           A+    KTL  V +  N I   G  AL+D+ +ENK +  L L  N+I  +GA  L     
Sbjct: 104 AMLHHNKTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRNSIGPEGAKSLARVLA 163

Query: 370 --------------------GQALSKL-----PSLAILNLGDCLLKSAGASSIAKYLTDN 404
                               GQ L++L       L +L LG   L  AG++ +A  L  N
Sbjct: 164 GDNDALLLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLEHN 223

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             L+++ L  N++  +G     + +   + L+ + ++ N  G++G   + + + S
Sbjct: 224 RVLQELYLDVNDMGDEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALIS 278



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 30/177 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL--- 58
           +AA+    KTL  V +  N I   G  AL+D+ +ENK +  L L  N+I  +GA  L   
Sbjct: 102 IAAMLHHNKTLRTVFLGCNDIGPKGAAALADSLKENKTVEALWLKRNSIGPEGAKSLARV 161

Query: 59  ----------------------GQALSKL-----PSLAILNLGDCLLKSAGASSIAKYLT 91
                                 GQ L++L       L +L LG   L  AG++ +A  L 
Sbjct: 162 LAGDNDALLLLDLVFNKIGPEGGQHLARLLEDERCRLEVLFLGGNALGPAGSARLAHSLE 221

Query: 92  DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
            N  L+++ L  N++  +G     + +   + L+ + ++ N  G++G   + + + S
Sbjct: 222 HNRVLQELYLDVNDMGDEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALIS 278



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 14/162 (8%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--S 67
           + L+ + +  N +   G  A +     N  LR L L  N I   GA  L +AL   P  +
Sbjct: 224 RVLQELYLDVNDMGDEGAAAFARVLATNSTLRALTLASNDIGDDGAAALAEALISNPNSA 283

Query: 68  LAILNLG-----------DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
           L +LNLG              +  AG +++A+ L  N TL  +NL  N+++  G   L +
Sbjct: 284 LQMLNLGYQKSTVVMGGRPNRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGR 343

Query: 117 AMKNKTKLKQINVSEN-QFGEEGVEEMEKLMKSFGMAAALVL 157
           A+ +   L+ + +  N Q G++GV ++   M +    AAL L
Sbjct: 344 ALASNRSLRVLELRANYQLGDDGVVDLLDAMATNDTLAALDL 385



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 26/229 (11%)

Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYES 285
           RL  L L  NA GP G   LA  L  +    L+EL L+ N +G  G    ++ L      
Sbjct: 197 RLEVLFLGGNALGPAGSARLAHSLEHNRV--LQELYLDVNDMGDEGAAAFARVL------ 248

Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVF-----KKLKTL------ERVEM--PQNG 332
                +   L+      N + ++GA  LA          L+ L        V M    N 
Sbjct: 249 ----ATNSTLRALTLASNDIGDDGAAALAEALISNPNSALQMLNLGYQKSTVVMGGRPNR 304

Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL-GDCLLKS 391
           I   G+ AL+     N+ L  LNLN N +T  GA  LG+AL+   SL +L L  +  L  
Sbjct: 305 IGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGRALASNRSLRVLELRANYQLGD 364

Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
            G   +   +  N TL  ++L   ++ + G   L++ ++    L  +++
Sbjct: 365 DGVVDLLDAMATNDTLAALDLVGCQVGLVGLRRLLRHVETHPSLISVHL 413



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 1/111 (0%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL-GDCLL 78
           N I   G+ AL+     N+ L  LNLN N +T  GA  LG+AL+   SL +L L  +  L
Sbjct: 303 NRIGDAGVAALARMLATNRTLVALNLNKNQVTRVGARALGRALASNRSLRVLELRANYQL 362

Query: 79  KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
              G   +   +  N TL  ++L   ++ + G   L++ ++    L  +++
Sbjct: 363 GDDGVVDLLDAMATNDTLAALDLVGCQVGLVGLRRLLRHVETHPSLISVHL 413



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 57  PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
           PL  A S L       LG   +   GA +IA  L  N TL  V L CN+I  +G   L  
Sbjct: 80  PLASARSVL-------LGADEIGPEGAMAIAAMLHHNKTLRTVFLGCNDIGPKGAAALAD 132

Query: 117 AMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
           ++K    ++ + +  N  G EG + + +++
Sbjct: 133 SLKENKTVEALWLKRNSIGPEGAKSLARVL 162


>gi|398024794|ref|XP_003865558.1| hypothetical protein, conserved [Leishmania donovani]
 gi|322503795|emb|CBZ38881.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 1123

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 176/451 (39%), Gaps = 92/451 (20%)

Query: 58  LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           L QAL    ++  LNL        GAS +A YL DN T+ ++NL+   I  +G  +L KA
Sbjct: 525 LAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELNLSSCTIGNRGAQNLCKA 584

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           +     L+ +++S N    + +  +  +++         LE         EQ + +   N
Sbjct: 585 LATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKLERTRVASEFVEQVKMACSLN 644

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS---- 233
              A         +D +                              A L +++LS    
Sbjct: 645 RERAAVKRIYYRLHDGD------------------------------ASLTKIELSSPDE 674

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
           +       V  +  +LR++   ++E + L+ N +G  GC  L+  L +C    +K     
Sbjct: 675 ERVIDDQTVSTICTVLRNNT--SVEVIDLSGNVIGKNGCSALAATLSECTSKVRK----- 727

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN--- 350
                I  +N ++++ A  LAA F K+KTL  V +    I  +G+ AL+   EEN +   
Sbjct: 728 ----IILSKNPIDDDAAAELAACFPKIKTLREVILYNTNITKIGMEALAKGLEENASIVW 783

Query: 351 ----------------LRHLNLNDNTITYK--------GAI--------P---------- 368
                           +R+L LN+     K        G I        P          
Sbjct: 784 IGITDDDTADENVSLLMRNLALNNGPAALKRITLSIDAGVIVDDVDLSRPVDCSMDDSLC 843

Query: 369 --LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             L  +L + P+L  LNL    + SA    I + +    +L  ++L+ N+I   G   ++
Sbjct: 844 KFLCASLVRCPTLRSLNLAHNEISSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQII 903

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
             ++  + L+ +N + N F  E +E + +L+
Sbjct: 904 ACLERVSNLRSVNFAGNLFSAESLERVSQLV 934



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 61/279 (21%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           E++L  +A  P+ +  L D + +S    ++ L ++N+ +   G +LL++AL       +K
Sbjct: 348 EVNLQWDAPLPMCMNYLVDYIAASS--VIQHLNISNSLIDDAGLELLAEAL-------QK 398

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEE 347
             S   LKV      R+   G + L AV +K +  ++ V +  N +    +  ++ A   
Sbjct: 399 NTS---LKVIELANCRITATGIQKLFAVLQKGICLVQEVNIANNNLDEGSVQYITAALRA 455

Query: 348 NKNLRHLNLNDNTIT--------------------YKGAIPL------------------ 369
           N  L+ LN+N N                        +  +PL                  
Sbjct: 456 NPRLKTLNINVNPAISPASMQEIAGLTMVNRAPPQIRSVLPLIENNSKDVVVLDFSGKGV 515

Query: 370 ----------GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
                      QAL    ++  LNL        GAS +A YL DN T+ ++NL+   I  
Sbjct: 516 TLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELNLSSCTIGN 575

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +G  +L KA+     L+ +++S N    + +  +  +++
Sbjct: 576 RGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLVLR 614



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 56/118 (47%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
            +  L+ A   N  +R LNL+ N+    GA  L   L+   ++  LNL  C + + GA +
Sbjct: 521 SVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELNLSSCTIGNRGAQN 580

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
           + K L  N  L+ ++L+ N +       L   ++  T L++  +   +   E VE+++
Sbjct: 581 LCKALATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKLERTRVASEFVEQVK 638



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 121/325 (37%), Gaps = 83/325 (25%)

Query: 6    FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK-------------------LRHLNLN 46
            F K+KTL  V +    I  +G+ AL+   EEN                     +R+L LN
Sbjct: 747  FPKIKTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALN 806

Query: 47   DNTITYK--------GAI--------P------------LGQALSKLPSLAILNLGDCLL 78
            +     K        G I        P            L  +L + P+L  LNL    +
Sbjct: 807  NGPAALKRITLSIDAGVIVDDVDLSRPVDCSMDDSLCKFLCASLVRCPTLRSLNLAHNEI 866

Query: 79   KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             SA    I + +    +L  ++L+ N+I   G   ++  ++  + L+ +N + N F  E 
Sbjct: 867  SSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSNLRSVNFAGNLFSAES 926

Query: 139  VEEMEKLMKSFGMAA----ALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSN 194
            +E + +L+ +  M +     L L    G+          +  ND D  G  ++    D  
Sbjct: 927  LERVSQLV-ALNMGSEVLKKLYLTTTRGD----------QLPNDIDLNGTTNSYRLTDEE 975

Query: 195  HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
                A                     L+  + +  LDL  N+FG  G   +A++LR +  
Sbjct: 976  VVVLAG-------------------LLQNSSTVKSLDLGSNSFGDEGCIAIAEVLRFN-- 1014

Query: 255  FALEELKLNNNGLGITGCKLLSKAL 279
              +E L L  N +G  G + L  AL
Sbjct: 1015 HTIEALNLAGNAIGSKGGEALYFAL 1039



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 51/101 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +LA   +   T+  + +  N     G + L+D   +N+ +  LNL+  TI  +GA  L +
Sbjct: 524 LLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELNLSSCTIGNRGAQNLCK 583

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
           AL+   +L  L+L + ++ +   S++   L +NT L +  L
Sbjct: 584 ALATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKL 624



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 27/192 (14%)

Query: 272  CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
            CK L  +L  C         P  L+      N + +     +  V +   +L  +++  N
Sbjct: 843  CKFLCASLVRC---------P-TLRSLNLAHNEISSAAVPYILEVVEMCPSLASLDLSGN 892

Query: 332  GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK- 390
             I   G   +    E   NLR +N       + G +   ++L ++  L  LN+G  +LK 
Sbjct: 893  QIDESGAQQIIACLERVSNLRSVN-------FAGNLFSAESLERVSQLVALNMGSEVLKK 945

Query: 391  ----SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
                +     +   +  N T     LT  E+ V  GL     ++N + +K +++  N FG
Sbjct: 946  LYLTTTRGDQLPNDIDLNGTTNSYRLTDEEVVVLAGL-----LQNSSTVKSLDLGSNSFG 1000

Query: 447  EEGVEEMEKLMK 458
            +EG   + ++++
Sbjct: 1001 DEGCIAIAEVLR 1012


>gi|440804489|gb|ELR25366.1| FERM central domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 1072

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 55/98 (56%)

Query: 43  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
           L+ N N IT + A  +GQ L   P L +LNL DC L + GA  +A  LT N TL ++++ 
Sbjct: 650 LSSNQNAITARHAQYIGQLLGACPVLRVLNLNDCRLGTQGAVDLAAVLTSNLTLHELHVA 709

Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
            N+I+ +G   LVKA+K    L   N ++N    +G +
Sbjct: 710 SNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAK 747



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 55/98 (56%)

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
           L+ N N IT + A  +GQ L   P L +LNL DC L + GA  +A  LT N TL ++++ 
Sbjct: 650 LSSNQNAITARHAQYIGQLLGACPVLRVLNLNDCRLGTQGAVDLAAVLTSNLTLHELHVA 709

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            N+I+ +G   LVKA+K    L   N ++N    +G +
Sbjct: 710 SNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAK 747



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 8/203 (3%)

Query: 257 LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAV 316
           ++EL L++N   IT       A H  Y        P+ L+V      RL  +GA  LAAV
Sbjct: 645 IQELDLSSNQNAIT-------ARHAQYIGQLLGACPV-LRVLNLNDCRLGTQGAVDLAAV 696

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
                TL  + +  N I   G  AL  A + N+ L   N  DN ++  GA  LG  L K 
Sbjct: 697 LTSNLTLHELHVASNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAKLLGDMLEKN 756

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
           P +  L LG       G + +   +  NTTL  ++L   E + + G  L++ +  K  + 
Sbjct: 757 PHVTTLALGLNKFGDLGINHLYHGIKCNTTLLRLDLCRTEFTAKAGKHLLRILTEKPNIT 816

Query: 437 QINVSENQFGEEGVEEMEKLMKS 459
            + ++ N  G+ G + +   + S
Sbjct: 817 CVKLAHNDIGQTGGQMLGAYLTS 839



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 12/220 (5%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L+L+D   G  G   LA +L S+    L EL + +N +   G   L KAL         +
Sbjct: 678 LNLNDCRLGTQGAVDLAAVLTSN--LTLHELHVASNQINDRGTAALVKAL---------K 726

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
           G+  AL  F    N L  +GAK+L  + +K   +  + +  N    +GI  L    + N 
Sbjct: 727 GN-QALHAFNFADNGLSADGAKLLGDMLEKNPHVTTLALGLNKFGDLGINHLYHGIKCNT 785

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            L  L+L     T K    L + L++ P++  + L    +   G   +  YLT  + L  
Sbjct: 786 TLLRLDLCRTEFTAKAGKHLLRILTEKPNITCVKLAHNDIGQTGGQMLGAYLTSGSRLTV 845

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
           ++L+   I  +    + + ++    +  + +S N+F ++G
Sbjct: 846 LDLSYTNIGSKALKAIGRGLRENRSVTTLKLSGNEFDKKG 885



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 28/174 (16%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LAAV     TL  + +  N I   G  AL  A + N+ L   N  DN ++  GA  LG  
Sbjct: 693 LAAVLTSNLTLHELHVASNQINDRGTAALVKALKGNQALHAFNFADNGLSADGAKLLGDM 752

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL-----------------------ED 98
           L K P +  L LG       G + +   +  NTTL                       E 
Sbjct: 753 LEKNPHVTTLALGLNKFGDLGINHLYHGIKCNTTLLRLDLCRTEFTAKAGKHLLRILTEK 812

Query: 99  VNLTC-----NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            N+TC     N+I   GG  L   + + ++L  +++S    G + ++ + + ++
Sbjct: 813 PNITCVKLAHNDIGQTGGQMLGAYLTSGSRLTVLDLSYTNIGSKALKAIGRGLR 866


>gi|118384891|ref|XP_001025584.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89307351|gb|EAS05339.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 409

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 29/309 (9%)

Query: 35  EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 94
           E  + +RH++L+ N IT  GA  L Q +   P L  LNL    +++AG+  +A +L +N 
Sbjct: 82  ESGEIIRHIDLSYNLITDTGAESLAQLIGNCPYLESLNLQGNDIETAGSQELANHLKENF 141

Query: 95  TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 154
           +L  +NL  N+I   G +++++ +     L ++N+ +N    +G+  +  ++       A
Sbjct: 142 SLRYLNLESNKIRTNGAMNIIEILFTNKNLIELNLGDNDITHDGMIGITSVLNYQNNTLA 201

Query: 155 LVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTS 214
           ++  D     S        +E     A+   SN S          S Q H  + ++  T 
Sbjct: 202 VLNVDRPTYTSI------GQETAIHFAKMLQSNRS------VEKLSLQKHAFNCEAIYTI 249

Query: 215 NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
            +    L    +L  LDL+ N     G E LA  L S  C ALE L L +N  G  G K+
Sbjct: 250 TE---HLLENNKLRVLDLTANKISFKGCEALAKYLCSEYC-ALESLILASNRTGHYGAKV 305

Query: 275 LSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIY 334
           +++AL        K  S + L +    RN +++ G KM+A   +   +L  +++  N   
Sbjct: 306 IAQAL-------SKTRSLVHLDM---TRNDIDDNGLKMIAESLETNDSLISLKLYWN--- 352

Query: 335 HVGITALSD 343
           H G  AL +
Sbjct: 353 HFGQMALQE 361



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 57/100 (57%)

Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           +RH++L+ N IT  GA  L Q +   P L  LNL    +++AG+  +A +L +N +L  +
Sbjct: 87  IRHIDLSYNLITDTGAESLAQLIGNCPYLESLNLQGNDIETAGSQELANHLKENFSLRYL 146

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
           NL  N+I   G +++++ +     L ++N+ +N    +G+
Sbjct: 147 NLESNKIRTNGAMNIIEILFTNKNLIELNLGDNDITHDGM 186



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 53/286 (18%)

Query: 222 KTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD 281
           ++G  +  +DLS N     G E LA L+ +  C  LE L L  N +   G + L+  L +
Sbjct: 82  ESGEIIRHIDLSYNLITDTGAESLAQLIGN--CPYLESLNLQGNDIETAGSQELANHLKE 139

Query: 282 CY-------ESSK--KEGSPLALKVFIAGRNRLE-------------------------- 306
            +       ES+K    G+   +++    +N +E                          
Sbjct: 140 NFSLRYLNLESNKIRTNGAMNIIEILFTNKNLIELNLGDNDITHDGMIGITSVLNYQNNT 199

Query: 307 ---------------NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
                           E A   A + +  +++E++ + ++      I  +++   EN  L
Sbjct: 200 LAVLNVDRPTYTSIGQETAIHFAKMLQSNRSVEKLSLQKHAFNCEAIYTITEHLLENNKL 259

Query: 352 RHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
           R L+L  N I++KG   L + L S+  +L  L L        GA  IA+ L+   +L  +
Sbjct: 260 RVLDLTANKISFKGCEALAKYLCSEYCALESLILASNRTGHYGAKVIAQALSKTRSLVHL 319

Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           ++T N+I   G   + ++++    L  + +  N FG+  ++E  KL
Sbjct: 320 DMTRNDIDDNGLKMIAESLETNDSLISLKLYWNHFGQMALQEFHKL 365



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 1/145 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            A + +  +++E + + ++      I  +++   EN KLR L+L  N I++KG   L + 
Sbjct: 221 FAKMLQSNRSVEKLSLQKHAFNCEAIYTITEHLLENNKLRVLDLTANKISFKGCEALAKY 280

Query: 62  L-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L S+  +L  L L        GA  IA+ L+   +L  +++T N+I   G   + ++++ 
Sbjct: 281 LCSEYCALESLILASNRTGHYGAKVIAQALSKTRSLVHLDMTRNDIDDNGLKMIAESLET 340

Query: 121 KTKLKQINVSENQFGEEGVEEMEKL 145
              L  + +  N FG+  ++E  KL
Sbjct: 341 NDSLISLKLYWNHFGQMALQEFHKL 365



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA +      LE + +  N I   G   L++  +EN  LR+LNL  N I   GA+ + + 
Sbjct: 105 LAQLIGNCPYLESLNLQGNDIETAGSQELANHLKENFSLRYLNLESNKIRTNGAMNIIEI 164

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNL---TCNEISVQGGLDLVKA 117
           L    +L  LNLGD  +   G   I   L   N TL  +N+   T   I  +  +   K 
Sbjct: 165 LFTNKNLIELNLGDNDITHDGMIGITSVLNYQNNTLAVLNVDRPTYTSIGQETAIHFAKM 224

Query: 118 MKNKTKLKQINVSENQFGEEGV 139
           +++   ++++++ ++ F  E +
Sbjct: 225 LQSNRSVEKLSLQKHAFNCEAI 246


>gi|308805753|ref|XP_003080188.1| unnamed protein product [Ostreococcus tauri]
 gi|116058648|emb|CAL54355.1| unnamed protein product [Ostreococcus tauri]
          Length = 533

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 26/245 (10%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L +LDL  N  G  G    A         +LE L L  NG+G  G + +++AL   + S 
Sbjct: 272 LRDLDLQHNGCGDHGAHAFA----QHGLGSLENLSLGFNGIGADGARAIAEALRKRHRSD 327

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLA---------------AVFKKLKTLERVEMPQN 331
             +     + V   G +      +KML                A+ + L  +E +++  N
Sbjct: 328 DDD-----MDVHGGGDDDAVGRASKMLKRLDLKCNTVGSDGAHALAESLNDVEDLDLSNN 382

Query: 332 GIYHVGITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
            +   G   ++ + +    NL+ L+L  N +T   A  +  AL +  SL  LNLG   L 
Sbjct: 383 SLRD-GTKWIAKSLKSKASNLKQLSLQANEMTDDDAWWIADALGENNSLKTLNLGSNALG 441

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            +GAS +A  L +NT+LE ++LT N I   G  +L+ AM     L ++ +  N    E  
Sbjct: 442 DSGASDLASDLRENTSLETLDLTRNTIGKDGANELMDAMDENKTLTRLAIESNLIPAETT 501

Query: 451 EEMEK 455
            EM++
Sbjct: 502 LEMKR 506



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L+ L+L  N +T   A  +  AL +  SL  LNLG   L  +GAS +A  L +NT+LE +
Sbjct: 402 LKQLSLQANEMTDDDAWWIADALGENNSLKTLNLGSNALGDSGASDLASDLRENTSLETL 461

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           +LT N I   G  +L+ AM     L ++ +  N    E   EM++
Sbjct: 462 DLTRNTIGKDGANELMDAMDENKTLTRLAIESNLIPAETTLEMKR 506



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 115/300 (38%), Gaps = 52/300 (17%)

Query: 96  LEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 154
           L ++    N +   G L L  A+ + K+ LK +NV++N  G EGV  +        +A A
Sbjct: 215 LVEIRSQANSLGADGALALSCALSREKSSLKALNVAQNLIGAEGVRALVA-----AIAGA 269

Query: 155 LVLED---------DEGECSDEEQDEESEEE-----NDSDAEGDNSNLSHNDSNHSHNAS 200
             L D         D G  +  +    S E      N   A+G  +        H  +  
Sbjct: 270 SNLRDLDLQHNGCGDHGAHAFAQHGLGSLENLSLGFNGIGADGARAIAEALRKRHRSDDD 329

Query: 201 NQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEEL 260
           +   +           S M       L  LDL  N  G  G   LA+ L       +E+L
Sbjct: 330 DMDVHGGGDDDAVGRASKM-------LKRLDLKCNTVGSDGAHALAESLND-----VEDL 377

Query: 261 KLNNNGLGITGCKLLSKALH-------------------DCYESSKKEGSPLALKVFIAG 301
            L+NN L   G K ++K+L                    D +  +   G   +LK    G
Sbjct: 378 DLSNNSL-RDGTKWIAKSLKSKASNLKQLSLQANEMTDDDAWWIADALGENNSLKTLNLG 436

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
            N L + GA  LA+  ++  +LE +++ +N I   G   L DA +ENK L  L +  N I
Sbjct: 437 SNALGDSGASDLASDLRENTSLETLDLTRNTIGKDGANELMDAMDENKTLTRLAIESNLI 496


>gi|387540924|gb|AFJ71089.1| nucleotide-binding oligomerization domain-containing protein 1
           [Macaca mulatta]
          Length = 953

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N ++ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A++N T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ   +G  ++
Sbjct: 896 QTLKHLWLIQNQITAKGTAQL 916



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEM 142
           K + + +NQ   +G  ++
Sbjct: 899 KHLWLIQNQITAKGTAQL 916



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  K++  V M  N +   G  A ++A   +  L  L+L  N ++ +G   L +A
Sbjct: 804 LALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARA 863

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL IL L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 864 LQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNN 923

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 924 TGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFS---RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     +R   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFSRLTVIR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|399498078|emb|CCG20367.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSK------ 277
           G+ L  L+L DNA G  GV     LL+S     LEEL L N+G+       +SK      
Sbjct: 213 GSNLKFLNLPDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSKLVPSTE 270

Query: 278 ---ALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
               LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNVNFISEEGVDELKEIFK 492



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNVNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +P N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLPDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL DN +  KG    G+                        A+SKL PS   
Sbjct: 212 EGSNLKFLNLPDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSKLVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|194038603|ref|XP_001925999.1| PREDICTED: uncharacterized protein C14orf166B homolog [Sus scrofa]
          Length = 486

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 131/259 (50%), Gaps = 23/259 (8%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   ++ L+L+DN     G+  L ++L+ +  + L+E+ ++NN LG+ G ++LS+ 
Sbjct: 110 IALVSNTTVLTLELADNCIMEEGILSLVEMLQEN--YYLQEMNISNNNLGLEGARILSEF 167

Query: 279 LHDCYES----------SKKEGSPL---ALKVFIAGR------NRLENEGAKMLAAVFKK 319
           L +   S           K+E + L   AL V    R      N+L ++  + L  +   
Sbjct: 168 LQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHNQLSDKAGEYLGQMLAL 227

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L+ +++  N     G  AL +    N  L+ L+L+ N+   +GA  LG+ L    SL
Sbjct: 228 NSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNEGASALGEVLRLNSSL 287

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
           A L++    + + G + ++K L  N +L+ + L  N IS+ G L L+ ++K   K+K++ 
Sbjct: 288 AYLDVSCNDISNEGITKLSKGLEVNESLKVLKLFLNPISMDGALLLILSIKRNPKSKMED 347

Query: 438 INVSENQFGEEGVEEMEKL 456
           I++S     E+ V+ ++ +
Sbjct: 348 IDISNVLVSEQFVKTLDSV 366



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 131/324 (40%), Gaps = 59/324 (18%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +     +NL    L   G  +IA  L  NTT+  + L  N I  +G L 
Sbjct: 77  GVVPVSYFIRNMEE-PYVNLNHHGLGPYGTKAIAIALVSNTTVLTLELADNCIMEEGILS 135

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEES 173
           LV+ ++    L+++N+S N  G EG   + + +++   ++   L       S     EES
Sbjct: 136 LVEMLQENYYLQEMNISNNNLGLEGARILSEFLQN-NTSSLFSL-----RLSGNNFKEES 189

Query: 174 EEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLS 233
                  AE     LS    N+     + SHN  +          ++L +G  L  LDLS
Sbjct: 190 -------AELFCQALS---VNYRIRTLDLSHNQLSDKAGEYLGQMLALNSG--LQSLDLS 237

Query: 234 DNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPL 293
            N F   G   L + LR +   AL++L L+ N  G                         
Sbjct: 238 WNHFCIHGAVALCNGLRVNV--ALKKLDLSMNSFG------------------------- 270

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
                        NEGA  L  V +   +L  +++  N I + GIT LS   E N++L+ 
Sbjct: 271 -------------NEGASALGEVLRLNSSLAYLDVSCNDISNEGITKLSKGLEVNESLKV 317

Query: 354 LNLNDNTITYKGAIPLGQALSKLP 377
           L L  N I+  GA+ L  ++ + P
Sbjct: 318 LKLFLNPISMDGALLLILSIKRNP 341



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 29/179 (16%)

Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
           G K +A       T+  +E+  N I   GI +L +  +EN  L+ +N+++N +  +GA  
Sbjct: 104 GTKAIAIALVSNTTVLTLELADNCIMEEGILSLVEMLQENYYLQEMNISNNNLGLEGARI 163

Query: 369 LG-----------------------------QALSKLPSLAILNLGDCLLKSAGASSIAK 399
           L                              QALS    +  L+L    L       + +
Sbjct: 164 LSEFLQNNTSSLFSLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHNQLSDKAGEYLGQ 223

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            L  N+ L+ ++L+ N   + G + L   ++    LK++++S N FG EG   + ++++
Sbjct: 224 MLALNSGLQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNEGASALGEVLR 282



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 73/136 (53%), Gaps = 2/136 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N     G  AL +    N  L+ L+L+ N+   +GA  LG+ L    SLA L
Sbjct: 231 LQSLDLSWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNEGASALGEVLRLNSSLAYL 290

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++    + + G + ++K L  N +L+ + L  N IS+ G L L+ ++K   K+K++ I++
Sbjct: 291 DVSCNDISNEGITKLSKGLEVNESLKVLKLFLNPISMDGALLLILSIKRNPKSKMEDIDI 350

Query: 130 SENQFGEEGVEEMEKL 145
           S     E+ V+ ++ +
Sbjct: 351 SNVLVSEQFVKTLDSV 366



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 29/166 (17%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLG----------- 59
           T+  +E+  N I   GI +L +  +EN  L+ +N+++N +  +GA  L            
Sbjct: 117 TVLTLELADNCIMEEGILSLVEMLQENYYLQEMNISNNNLGLEGARILSEFLQNNTSSLF 176

Query: 60  ------------------QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
                             QALS    +  L+L    L       + + L  N+ L+ ++L
Sbjct: 177 SLRLSGNNFKEESAELFCQALSVNYRIRTLDLSHNQLSDKAGEYLGQMLALNSGLQSLDL 236

Query: 102 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           + N   + G + L   ++    LK++++S N FG EG   + ++++
Sbjct: 237 SWNHFCIHGAVALCNGLRVNVALKKLDLSMNSFGNEGASALGEVLR 282


>gi|301113204|ref|XP_002998372.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]
 gi|262111673|gb|EEY69725.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4]
          Length = 1780

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 67/286 (23%), Positives = 114/286 (39%), Gaps = 58/286 (20%)

Query: 220  SLKTGARLVELDLSDNAFGPIGVEG-LADLLRSSCCFALEELKLNNNGLG---------- 268
            +L T +RL  LDL  N  G  G+   L D +R +  +AL ELKL++N +G          
Sbjct: 1448 ALATNSRLQVLDLMHNRIGKDGITPWLGDTMRVN--YALRELKLSHNAIGDQKTAELLQS 1505

Query: 269  -----ITGCKLLSKALHDCYESSKKEGSPLA----------LKVFIAGRNRLENEGAKML 313
                 +T  + L   L +   ++    SP A          L+  +     + +E +  L
Sbjct: 1506 LAPKPLTEEEKLKACLANRRHTTMPHKSPEAQTDSEPFNSTLRSLLLSNTGISDEASTHL 1565

Query: 314  AAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI------ 367
            A +    ++L  +++  N     G   ++   + N  LR+LN  +N +    A+      
Sbjct: 1566 AHMLSHTRSLTHLDISCNNFTSEGNVNIAQGMQRNATLRYLNYRENKLDEVAALAILRAL 1625

Query: 368  -----------------------PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
                                    LGQ LS   SL  L+L  C L+  G       L +N
Sbjct: 1626 KTCSFLETALFQDCFGGESTVGSALGQLLSTADSLVSLDLSHCSLEPPGVVDFYYALAEN 1685

Query: 405  TTLEDVNLTCNEISVQGGLD-LVKAMKNKTKLKQINVSENQFGEEG 449
            T+L  ++LTC+ +        L K+++  + L  IN++ N+    G
Sbjct: 1686 TSLRSIDLTCSGLKSDSAAGILAKSLQQNSTLTFINLAYNEITLRG 1731



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 33/195 (16%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAI----- 56
            LA +    ++L H+++  N     G   ++   + N  LR+LN  +N +    A+     
Sbjct: 1565 LAHMLSHTRSLTHLDISCNNFTSEGNVNIAQGMQRNATLRYLNYRENKLDEVAALAILRA 1624

Query: 57   ------------------------PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 92
                                     LGQ LS   SL  L+L  C L+  G       L +
Sbjct: 1625 LKTCSFLETALFQDCFGGESTVGSALGQLLSTADSLVSLDLSHCSLEPPGVVDFYYALAE 1684

Query: 93   NTTLEDVNLTCNEISVQGGLD-LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
            NT+L  ++LTC+ +        L K+++  + L  IN++ N+    G + +   +     
Sbjct: 1685 NTSLRSIDLTCSGLKSDSAAGILAKSLQQNSTLTFINLAYNEITLRGCKVLRDGVAGRSE 1744

Query: 152  AAA---LVLEDDEGE 163
             AA   + LE + GE
Sbjct: 1745 TAARLVMSLEGNSGE 1759



 Score = 42.7 bits (99), Expect = 0.43,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 36/198 (18%)

Query: 309  GAKMLAAVFKKLKTLERVEMPQNGIYHVGITA-LSDAFEENKNLRHLNLNDNTITYKGAI 367
            G+  LA        L+ +++  N I   GIT  L D    N  LR L L+ N I  +   
Sbjct: 1441 GSTALAKALATNSRLQVLDLMHNRIGKDGITPWLGDTMRVNYALRELKLSHNAIGDQKTA 1500

Query: 368  PLGQALSKLPSLAILNLGDCL-----------------------------------LKSA 392
             L Q+L+  P      L  CL                                   +   
Sbjct: 1501 ELLQSLAPKPLTEEEKLKACLANRRHTTMPHKSPEAQTDSEPFNSTLRSLLLSNTGISDE 1560

Query: 393  GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
             ++ +A  L+   +L  ++++CN  + +G +++ + M+    L+ +N  EN+  E     
Sbjct: 1561 ASTHLAHMLSHTRSLTHLDISCNNFTSEGNVNIAQGMQRNATLRYLNYRENKLDEVAALA 1620

Query: 453  MEKLMKSFGMAAALVLED 470
            + + +K+       + +D
Sbjct: 1621 ILRALKTCSFLETALFQD 1638



 Score = 40.4 bits (93), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 72/194 (37%), Gaps = 36/194 (18%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITA-LSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            LA        L+ +++  N I   GIT  L D    N  LR L L+ N I  +    L Q
Sbjct: 1445 LAKALATNSRLQVLDLMHNRIGKDGITPWLGDTMRVNYALRELKLSHNAIGDQKTAELLQ 1504

Query: 61   ALSKLPSLAILNLGDCL-----------------------------------LKSAGASS 85
            +L+  P      L  CL                                   +    ++ 
Sbjct: 1505 SLAPKPLTEEEKLKACLANRRHTTMPHKSPEAQTDSEPFNSTLRSLLLSNTGISDEASTH 1564

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            +A  L+   +L  ++++CN  + +G +++ + M+    L+ +N  EN+  E     + + 
Sbjct: 1565 LAHMLSHTRSLTHLDISCNNFTSEGNVNIAQGMQRNATLRYLNYRENKLDEVAALAILRA 1624

Query: 146  MKSFGMAAALVLED 159
            +K+       + +D
Sbjct: 1625 LKTCSFLETALFQD 1638


>gi|399497974|emb|CCG20315.1| Ran GTPase activating protein 2 [Solanum kurtzianum]
          Length = 553

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 51/283 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLESQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL- 382
           ++++  N         L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L 
Sbjct: 330 KLDLRDNMFGPEVGPVLCKALSKHENLTEIYLSYLNLEDEGAIAIVNALKDSAPSLAVLE 389

Query: 383 ---------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
                                      +LG+  LK  GA  IAK L  ++ L +V+++ N
Sbjct: 390 MAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSN 449

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 450 ALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     E    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLESQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|345803729|ref|XP_854810.2| PREDICTED: uncharacterized protein C14orf166B [Canis lupus
           familiaris]
          Length = 491

 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 23/244 (9%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   +V L+L+DN     G+  L ++L+ +  + L+EL +++N LG  G K++S+ 
Sbjct: 130 IALVSNTSVVTLELADNGLMEEGILSLLEMLQEN--YYLQELNVSDNDLGFKGAKIISEF 187

Query: 279 LHDCYES----------SKKEGSPLALKVFIA---------GRNRLENEGAKMLAAVFKK 319
           L     S           + E + L  +   A           N+  ++G + +  +   
Sbjct: 188 LQRNTSSLWNLQLSGNNFRDESAELLCQALAANYQIKTLDLSHNQFSDKGGEYMGQMLAL 247

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L+ +++  N  Y  G  AL +    N  L+ L+L+ N    +GA  LG+ L    SL
Sbjct: 248 NVGLQSLDLSWNHFYIRGAVALCNGLRANGTLQKLDLSMNGFGNEGATALGEVLRLNSSL 307

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
             L++    + + G S I+K L  N +L+ + L  N +S+ G + L+ ++K   K+K+++
Sbjct: 308 VYLDISINDISNEGISKISKGLEFNESLKVLKLFLNPMSMDGAVLLILSIKRNPKSKMEE 367

Query: 438 INVS 441
           I++S
Sbjct: 368 IDIS 371



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 35/223 (15%)

Query: 265 NGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
           N L +  C+L+S  +   Y     E S + L     G N     G K +A       ++ 
Sbjct: 86  NELYLEACRLMS-VVPVSYFLRNMEESYMNLNHHGLGPN-----GTKAIAIALVSNTSVV 139

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP---------------- 368
            +E+  NG+   GI +L +  +EN  L+ LN++DN + +KGA                  
Sbjct: 140 TLELADNGLMEEGILSLLEMLQENYYLQELNVSDNDLGFKGAKIISEFLQRNTSSLWNLQ 199

Query: 369 -------------LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
                        L QAL+    +  L+L        G   + + L  N  L+ ++L+ N
Sbjct: 200 LSGNNFRDESAELLCQALAANYQIKTLDLSHNQFSDKGGEYMGQMLALNVGLQSLDLSWN 259

Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              ++G + L   ++    L+++++S N FG EG   + ++++
Sbjct: 260 HFYIRGAVALCNGLRANGTLQKLDLSMNGFGNEGATALGEVLR 302



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N  Y  G  AL +    N  L+ L+L+ N    +GA  LG+ L    SL  L
Sbjct: 251 LQSLDLSWNHFYIRGAVALCNGLRANGTLQKLDLSMNGFGNEGATALGEVLRLNSSLVYL 310

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++    + + G S I+K L  N +L+ + L  N +S+ G + L+ ++K   K+K+++I++
Sbjct: 311 DISINDISNEGISKISKGLEFNESLKVLKLFLNPMSMDGAVLLILSIKRNPKSKMEEIDI 370

Query: 130 S 130
           S
Sbjct: 371 S 371



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 29/162 (17%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIP----------------- 57
           +E+  NG+   GI +L +  +EN  L+ LN++DN + +KGA                   
Sbjct: 141 LELADNGLMEEGILSLLEMLQENYYLQELNVSDNDLGFKGAKIISEFLQRNTSSLWNLQL 200

Query: 58  ------------LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 105
                       L QAL+    +  L+L        G   + + L  N  L+ ++L+ N 
Sbjct: 201 SGNNFRDESAELLCQALAANYQIKTLDLSHNQFSDKGGEYMGQMLALNVGLQSLDLSWNH 260

Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
             ++G + L   ++    L+++++S N FG EG   + ++++
Sbjct: 261 FYIRGAVALCNGLRANGTLQKLDLSMNGFGNEGATALGEVLR 302



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 60/310 (19%)

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
           + +NL    L   G  +IA  L  NT++  + L  N +  +G L L++ ++    L+++N
Sbjct: 111 SYMNLNHHGLGPNGTKAIAIALVSNTSVVTLELADNGLMEEGILSLLEMLQENYYLQELN 170

Query: 129 VSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSN 187
           VS+N  G +G + + E L ++      L L        +  +DE +E    + A      
Sbjct: 171 VSDNDLGFKGAKIISEFLQRNTSSLWNLQL------SGNNFRDESAELLCQALA------ 218

Query: 188 LSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLAD 247
                +N+     + SHN  +          ++L  G  L  LDLS N F   G   L +
Sbjct: 219 -----ANYQIKTLDLSHNQFSDKGGEYMGQMLALNVG--LQSLDLSWNHFYIRGAVALCN 271

Query: 248 LLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLEN 307
            LR++    L++L L+ NG G                                      N
Sbjct: 272 GLRANG--TLQKLDLSMNGFG--------------------------------------N 291

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
           EGA  L  V +   +L  +++  N I + GI+ +S   E N++L+ L L  N ++  GA+
Sbjct: 292 EGATALGEVLRLNSSLVYLDISINDISNEGISKISKGLEFNESLKVLKLFLNPMSMDGAV 351

Query: 368 PLGQALSKLP 377
            L  ++ + P
Sbjct: 352 LLILSIKRNP 361



 Score = 38.5 bits (88), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 56/115 (48%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           L  A   N +++ L+L+ N  + KG   +GQ L+    L  L+L        GA ++   
Sbjct: 213 LCQALAANYQIKTLDLSHNQFSDKGGEYMGQMLALNVGLQSLDLSWNHFYIRGAVALCNG 272

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           L  N TL+ ++L+ N    +G   L + ++  + L  +++S N    EG+ ++ K
Sbjct: 273 LRANGTLQKLDLSMNGFGNEGATALGEVLRLNSSLVYLDISINDISNEGISKISK 327


>gi|344925101|ref|ZP_08778562.1| hypothetical protein COdytL_10705 [Candidatus Odyssella
           thessalonicensis L13]
          Length = 301

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 40/232 (17%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL++   L  LDLSDN      ++GLA  ++S+    L+ LKLN+  L   G K+L +AL
Sbjct: 31  SLESYPSLRSLDLSDNPLSLESIKGLAAYIKSNK--NLKTLKLNSVSLTPEGLKILLEAL 88

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            +      +    L+LK      N L  EG K+    F     LER+ +  N I   GI 
Sbjct: 89  KET-----QSLRHLSLKC-----NTLGPEGIKVFGESFTGSTFLERLNLASNNIGPEGIK 138

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
              ++F     L+HL+L  N I                               G  S+A 
Sbjct: 139 VFVESFTGITFLKHLSLASNKI----------------------------GPEGIKSLAD 170

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
            L +N +L  ++++ N++  +G   L  A+K  TKL+ +N++ N   +EGV+
Sbjct: 171 LLMNNPSLTRLDVSMNKLQYKGMPSLATALKVNTKLQYLNLATNNIYDEGVK 222



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           L+++G   +    +   +L  +++  N +    I  L+   + NKNL+ L LN  ++T +
Sbjct: 20  LDSKGLATIIYSLESYPSLRSLDLSDNPLSLESIKGLAAYIKSNKNLKTLKLNSVSLTPE 79

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G   L +AL +  SL  L+L    L   G     +  T +T LE +NL  N I  +G   
Sbjct: 80  GLKILLEALKETQSLRHLSLKCNTLGPEGIKVFGESFTGSTFLERLNLASNNIGPEGIKV 139

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
            V++    T LK ++++ N+ G EG++ +  L+
Sbjct: 140 FVESFTGITFLKHLSLASNKIGPEGIKSLADLL 172



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 71/140 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           +L    K+ ++L H+ +  N +   GI    ++F  +  L  LNL  N I  +G     +
Sbjct: 83  ILLEALKETQSLRHLSLKCNTLGPEGIKVFGESFTGSTFLERLNLASNNIGPEGIKVFVE 142

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           + + +  L  L+L    +   G  S+A  L +N +L  ++++ N++  +G   L  A+K 
Sbjct: 143 SFTGITFLKHLSLASNKIGPEGIKSLADLLMNNPSLTRLDVSMNKLQYKGMPSLATALKV 202

Query: 121 KTKLKQINVSENQFGEEGVE 140
            TKL+ +N++ N   +EGV+
Sbjct: 203 NTKLQYLNLATNNIYDEGVK 222



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 68/136 (50%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           +L  +++  N +    I  L+   + NK L+ L LN  ++T +G   L +AL +  SL  
Sbjct: 37  SLRSLDLSDNPLSLESIKGLAAYIKSNKNLKTLKLNSVSLTPEGLKILLEALKETQSLRH 96

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L+L    L   G     +  T +T LE +NL  N I  +G    V++    T LK ++++
Sbjct: 97  LSLKCNTLGPEGIKVFGESFTGSTFLERLNLASNNIGPEGIKVFVESFTGITFLKHLSLA 156

Query: 131 ENQFGEEGVEEMEKLM 146
            N+ G EG++ +  L+
Sbjct: 157 SNKIGPEGIKSLADLL 172



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 62/130 (47%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TL+ +++ +  +   G+  +  + E    LR L+L+DN ++ +    L   +    +L  
Sbjct: 9   TLQRLKLAKLDLDSKGLATIIYSLESYPSLRSLDLSDNPLSLESIKGLAAYIKSNKNLKT 68

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L L    L   G   + + L +  +L  ++L CN +  +G     ++    T L+++N++
Sbjct: 69  LKLNSVSLTPEGLKILLEALKETQSLRHLSLKCNTLGPEGIKVFGESFTGSTFLERLNLA 128

Query: 131 ENQFGEEGVE 140
            N  G EG++
Sbjct: 129 SNNIGPEGIK 138



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%)

Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
           A + N  L+ L L    +  KG   +  +L   PSL  L+L D  L       +A Y+  
Sbjct: 3   ALKSNMTLQRLKLAKLDLDSKGLATIIYSLESYPSLRSLDLSDNPLSLESIKGLAAYIKS 62

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
           N  L+ + L    ++ +G   L++A+K    L+ +++  N  G EG++
Sbjct: 63  NKNLKTLKLNSVSLTPEGLKILLEALKETQSLRHLSLKCNTLGPEGIK 110



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%)

Query: 33  AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 92
           A + N  L+ L L    +  KG   +  +L   PSL  L+L D  L       +A Y+  
Sbjct: 3   ALKSNMTLQRLKLAKLDLDSKGLATIIYSLESYPSLRSLDLSDNPLSLESIKGLAAYIKS 62

Query: 93  NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           N  L+ + L    ++ +G   L++A+K    L+ +++  N  G EG++
Sbjct: 63  NKNLKTLKLNSVSLTPEGLKILLEALKETQSLRHLSLKCNTLGPEGIK 110


>gi|156354305|ref|XP_001623338.1| predicted protein [Nematostella vectensis]
 gi|156210026|gb|EDO31238.1| predicted protein [Nematostella vectensis]
          Length = 376

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 156/376 (41%), Gaps = 37/376 (9%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA +     +L  V + +  +   G+T+L++A + NK +R L ++   +T +    +G+ 
Sbjct: 9   LAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAIGEM 68

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    ++  L L    L  +GA  IA  L  NTT+  +++  + I   G   + K ++N 
Sbjct: 69  LRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVIQNV 128

Query: 122 TKLKQINVSENQFGEEGVEEMEKLM-KSFGMAAALVLE----DDEGE-------CSDEEQ 169
           T+L   N+S N  G +GV+ + +L+ KS      L L+    D+ G          +   
Sbjct: 129 TRL---NLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELAIALSRNSCL 185

Query: 170 DEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVE 229
           +E S   ND + EG  +      SN +      ++NN  Q  N        L+    +  
Sbjct: 186 EELSVACNDINDEGMCALAESVASNETLQVLYITYNNVGQ--NAGRAIGEMLRHNTTVTS 243

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           L LS    G  G  G+A  L       + +L + N+ +G  G K ++K + +        
Sbjct: 244 LFLSGGRLGDSGARGIALGLAQK--RTIAQLSIANSSIGTAGIKAITKVIQN-VTRLNLS 300

Query: 290 GSPLA-----------------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
           G+P+                  LK        ++  GAK LA    +   LE + +  N 
Sbjct: 301 GNPVGYGGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAKELAIALSRNSCLEELSVACND 360

Query: 333 IYHVGITALSDAFEEN 348
           I   G+ AL+++   N
Sbjct: 361 INDEGMCALAESVASN 376



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 20/235 (8%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN--GLGITGCKLLSKALHDCYE 284
           L ++ +     G  GV  LA+            LK+N     LGI G  + S+A     E
Sbjct: 19  LTDVRIDRTILGSTGVTSLAN-----------ALKVNKTVRTLGIDGGNMTSEAGRAIGE 67

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
             +   +  +L  F+ G  RL + GA+ +A    +  T+ ++ +  + I   GI A++  
Sbjct: 68  MLRHNTTVTSL--FLRG-GRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKV 124

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTD 403
            +   N+  LNL+ N + Y G   + + L K  S L  L L  C +   GA  +A  L+ 
Sbjct: 125 IQ---NVTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLDHCNIDEFGAKELAIALSR 181

Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N+ LE++++ CN+I+ +G   L +++ +   L+ + ++ N  G+     + ++++
Sbjct: 182 NSCLEELSVACNDINDEGMCALAESVASNETLQVLYITYNNVGQNAGRAIGEMLR 236



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           LA +     +L  V + +  +   G+T+L++A + NK +R L ++   +T +    +G+ 
Sbjct: 9   LAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAIGEM 68

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L    ++  L L    L  +GA  IA  L  NTT+  +++  + I   G   + K ++N 
Sbjct: 69  LRHNTTVTSLFLRGGRLGDSGARGIAIGLAQNTTIAQLSIAHSSIGTAGIKAITKVIQNV 128

Query: 433 TKLKQINVSENQFGEEGVEEMEKLM 457
           T+L   N+S N  G +GV+ + +L+
Sbjct: 129 TRL---NLSSNPVGYDGVKAIARLL 150



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 151/386 (39%), Gaps = 73/386 (18%)

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
           A  +A+ L+DNT+L DV +    +   G   L  A+K    ++ + +       E    +
Sbjct: 6   AIKLAEILSDNTSLTDVRIDRTILGSTGVTSLANALKVNKTVRTLGIDGGNMTSEAGRAI 65

Query: 143 EKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQ 202
            ++++      +L L                    DS A G    L+ N +    + ++ 
Sbjct: 66  GEMLRHNTTVTSLFLRGGR--------------LGDSGARGIAIGLAQNTTIAQLSIAHS 111

Query: 203 SHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSC--------- 253
           S   +     T        K    +  L+LS N  G  GV+ +A LL  SC         
Sbjct: 112 SIGTAGIKAIT--------KVIQNVTRLNLSSNPVGYDGVKAIARLLVKSCSRLKFLFLD 163

Query: 254 -C-----------------FALEELKLNNNGLGITG-CKLLS--------KALHDCYE-- 284
            C                   LEEL +  N +   G C L          + L+  Y   
Sbjct: 164 HCNIDEFGAKELAIALSRNSCLEELSVACNDINDEGMCALAESVASNETLQVLYITYNNV 223

Query: 285 ---SSKKEGSPL-----ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
              + +  G  L        +F++G  RL + GA+ +A    + +T+ ++ +  + I   
Sbjct: 224 GQNAGRAIGEMLRHNTTVTSLFLSG-GRLGDSGARGIALGLAQKRTIAQLSIANSSIGTA 282

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGAS 395
           GI A++   +   N+  LNL+ N + Y G   + + L K    L  L L  C +   GA 
Sbjct: 283 GIKAITKVIQ---NVTRLNLSGNPVGYGGVKAIARLLVKSCCRLKFLFLDHCNIDVFGAK 339

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQG 421
            +A  L+ N+ LE++++ CN+I+ +G
Sbjct: 340 ELAIALSRNSCLEELSVACNDINDEG 365


>gi|399497996|emb|CCG20326.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  G+      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGIRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALIKHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   GI A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGIRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399498048|emb|CCG20352.1| Ran GTPase activating protein 2 [Solanum tarijense]
          Length = 553

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAFAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PS+A+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  I+K L  +  L +V+++ 
Sbjct: 389 EMAGNDITVEAASAIASCIAAKQLLAKLSLGENELKDEGAIQISKALERHRHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  I+K L  +  L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQISKALERHRHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|344174744|emb|CCA86554.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
           syzygii R24]
          Length = 392

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 109/238 (45%), Gaps = 36/238 (15%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDC---- 282
           L  LD+SDN  G  G   LADL        L  L + +N +G  G + L+ ++       
Sbjct: 171 LTTLDISDNRIGDAGARALADL------PLLTTLDVGDNDIGPEGAQALATSMTLARLDL 224

Query: 283 -YESSKKEGS-PLALKVFIAG----RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
            Y     +G+  LA+   +       N L +EGA +LAA       L  +++  NGI + 
Sbjct: 225 RYNEIGVDGAGALAVNTRLTSLNVCGNALGSEGAVLLAAN----TALSTLDISNNGIGNA 280

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G    + AF  N  L  LN+  N I   GA    +AL+    LA L++    +  AGA +
Sbjct: 281 G----AWAFGSNATLTTLNVASNGIESVGA----RALAANTRLATLDISSNKIGDAGARA 332

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
           +A     N TL  ++++CN I   G L    A+ N T L  +NVS N+ G  G+  +E
Sbjct: 333 MAA----NDTLVALDVSCNLIGKPGAL----ALANNTGLTTLNVSLNRIGAAGMRALE 382



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 16/132 (12%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  +++  NGI + G    + AF  N  L  LN+  N I   GA    +AL+    LA L
Sbjct: 267 LSTLDISNNGIGNAG----AWAFGSNATLTTLNVASNGIESVGA----RALAANTRLATL 318

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           ++    +  AGA ++A     N TL  ++++CN I   G L    A+ N T L  +NVS 
Sbjct: 319 DISSNKIGDAGARAMAA----NDTLVALDVSCNLIGKPGAL----ALANNTGLTTLNVSL 370

Query: 132 NQFGEEGVEEME 143
           N+ G  G+  +E
Sbjct: 371 NRIGAAGMRALE 382



 Score = 45.1 bits (105), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L  L+++DN I   GA    +AL+ LP L  L++GD  +   GA ++A  +T    L  +
Sbjct: 171 LTTLDISDNRIGDAGA----RALADLPLLTTLDVGDNDIGPEGAQALATSMT----LARL 222

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
           +L  NEI V G      A+   T+L  +NV  N  G EG
Sbjct: 223 DLRYNEIGVDG----AGALAVNTRLTSLNVCGNALGSEG 257


>gi|342185983|emb|CCC95468.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 709

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 105/208 (50%), Gaps = 18/208 (8%)

Query: 256 ALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
           ++  L +  N  G+ G + L +A+         E +P  ++    GRN+L+++ A ++  
Sbjct: 62  SVRALTIEGNTFGLNGLQALLEAI---------EVNPGIVRELRLGRNKLKDQAAVVIGH 112

Query: 316 VFKK----LKTLERVEMPQNGIYHVGITALSDAFE-ENKNLRHLNLNDNTITYKGAIPLG 370
           V  +    L+ L+   + +N I  +G+  ++ A   E  ++  L+ ++N I    A  LG
Sbjct: 113 VLSRNGCGLRVLD---LSENEITKLGVIPIAAALSNETCDIVELSFHNNNIESDAASYLG 169

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
           QA+ +   L  L+LG   ++  GA+ +AK +    +L  ++LT N I   GG +L +A+ 
Sbjct: 170 QAIRQGGRLKHLHLGYNAIRDEGAAQLAKCIPVTVSLSTLDLTANRIGASGGRELARALM 229

Query: 431 NKT-KLKQINVSENQFGEEGVEEMEKLM 457
             T  ++++N+  N F  E +E   +++
Sbjct: 230 TSTCNIQRLNLRHNLFDSETIEMFSEVI 257



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFE-ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           L  +++ +N I  +G+  ++ A   E   +  L+ ++N I    A  LGQA+ +   L  
Sbjct: 121 LRVLDLSENEITKLGVIPIAAALSNETCDIVELSFHNNNIESDAASYLGQAIRQGGRLKH 180

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINV 129
           L+LG   ++  GA+ +AK +    +L  ++LT N I   GG +L +A+   T  ++++N+
Sbjct: 181 LHLGYNAIRDEGAAQLAKCIPVTVSLSTLDLTANRIGASGGRELARALMTSTCNIQRLNL 240

Query: 130 SENQFGEEGVEEMEKLM 146
             N F  E +E   +++
Sbjct: 241 RHNLFDSETIEMFSEVI 257


>gi|320167080|gb|EFW43979.1| hypothetical protein CAOG_02004 [Capsaspora owczarzaki ATCC 30864]
          Length = 285

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 5/198 (2%)

Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGI 333
           L ++  HD Y    K    L+L    AG       GA  +A   K    +  +++ QN I
Sbjct: 2   LATQRQHDLYHQVTKASGWLSLWQSEAG-----CAGAMAVAEALKVNTAVTGLDLYQNQI 56

Query: 334 YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAG 393
              G  A+++A + N  +  L+L +N I   GA    +AL    S+  L L    +  AG
Sbjct: 57  GDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAG 116

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
           A +IA+ +  NTTL  ++L  N+I   G   + +A++  T + Q+++  NQ G+ G + +
Sbjct: 117 AQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDIGAQAI 176

Query: 454 EKLMKSFGMAAALVLEDD 471
            + +K      ++ LED+
Sbjct: 177 AEALKVNKTLTSIRLEDN 194



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 77/146 (52%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +++ QN I   G  A+++A + N  +  L+L +N I   GA    +AL    S+  L L 
Sbjct: 49  LDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLW 108

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              +  AGA +IA+ +  NTTL  ++L  N+I   G   + +A++  T + Q+++  NQ 
Sbjct: 109 VNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQI 168

Query: 135 GEEGVEEMEKLMKSFGMAAALVLEDD 160
           G+ G + + + +K      ++ LED+
Sbjct: 169 GDIGAQAIAEALKVNKTLTSIRLEDN 194



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 80/154 (51%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ ++GA+ +A   K   T+  +++ +N I   G  A ++A + NK++  L L  N I
Sbjct: 53  QNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRI 112

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +A+    +L  L+L    +  AGA +IA+ L  NTT+  ++L  N+I   G
Sbjct: 113 GDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDIG 172

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
              + +A+K    L  I + +N   E G+  + +
Sbjct: 173 AQAIAEALKVNKTLTSIRLEDNFLTEAGITALRE 206



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 67/122 (54%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G  A+++A + N  +  L+L  N I  +GA  + +AL    ++A+L+L +  +  AGA +
Sbjct: 32  GAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAEA 91

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            A+ L  N ++ ++ L  N I   G   + +A+   T L ++++ +NQ G+ G + + + 
Sbjct: 92  FAEALKVNKSVVELYLWVNRIGDAGAQAIARAIVVNTTLTKLHLYQNQIGDAGAQAIAEA 151

Query: 146 MK 147
           ++
Sbjct: 152 LR 153



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+  +++ +N I   G  A ++A + NK +  L L  N I   GA  + +A
Sbjct: 64  IAEALKVNTTVAVLDLRENQIGDAGAEAFAEALKVNKSVVELYLWVNRIGDAGAQAIARA 123

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           +    +L  L+L    +  AGA +IA+ L  NTT+  ++L  N+I   G   + +A+K  
Sbjct: 124 IVVNTTLTKLHLYQNQIGDAGAQAIAEALRVNTTVNQLDLWANQIGDIGAQAIAEALKVN 183

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
             L  I + +N   E G+  + +
Sbjct: 184 KTLTSIRLEDNFLTEAGITALRE 206



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 28/198 (14%)

Query: 81  AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
           AGA ++A+ L  NT +  ++L  N+I  QG   + +A+K  T +  +++ ENQ G+ G E
Sbjct: 31  AGAMAVAEALKVNTAVTGLDLYQNQIGDQGAQAIAEALKVNTTVAVLDLRENQIGDAGAE 90

Query: 141 EMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS--HNDSNHSHN 198
              + +K       L L  +        +  ++  +  + A   N+ L+  H   N   +
Sbjct: 91  AFAEALKVNKSVVELYLWVN--------RIGDAGAQAIARAIVVNTTLTKLHLYQNQIGD 142

Query: 199 ASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALE 258
           A  Q+   + + + T NQ             LDL  N  G IG + +A+ L+ +    L 
Sbjct: 143 AGAQAIAEALRVNTTVNQ-------------LDLWANQIGDIGAQAIAEALKVN--KTLT 187

Query: 259 ELKLNNNGL---GITGCK 273
            ++L +N L   GIT  +
Sbjct: 188 SIRLEDNFLTEAGITALR 205


>gi|157823287|ref|NP_001102706.1| nucleotide-binding oligomerization domain-containing protein 1
           [Rattus norvegicus]
 gi|149033305|gb|EDL88106.1| similar to Caspase recruitment domain protein 4 (predicted) [Rattus
           norvegicus]
          Length = 953

 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 79/156 (50%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + G K+L     K K +  + +  N I  +G   ++   +E + L HL L  N IT
Sbjct: 738 NQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLGKNRIT 797

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +G   + QA+    S+  + +    +   GA + A+ L D+ +L  ++L  N IS +GG
Sbjct: 798 SEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGG 857

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             L +A+K  T L  I +++N+  +E  E   ++++
Sbjct: 858 KSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLR 893



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N    +GV+ L + L          L L NN +   G + +++ L +C  
Sbjct: 728 SRLTVIRLSVNQITDMGVKVLCEELTKYKIVTF--LGLYNNQITDIGARYVAQILDECR- 784

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
                     L     G+NR+ +EG + +A   K   ++  V M  N I   G  A ++A
Sbjct: 785 ---------GLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
             ++ +L  L+L  N I+ +G   L QAL +  +L I+ L    L    A   A+ L  N
Sbjct: 836 LRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N I+ +G   L +A++  T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNHITAEGTAQLARALQKNTTITEICLNGNLIKPEEAKVFENEKRIICF 953



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 71/140 (50%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K K +  + +  N I  +G   ++   +E + L HL L  N IT +G   + QA+    S
Sbjct: 754 KYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTS 813

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           +  + +    +   GA + A+ L D+ +L  ++L  N IS +GG  L +A+K  T L  I
Sbjct: 814 IVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTII 873

Query: 128 NVSENQFGEEGVEEMEKLMK 147
            +++N+  +E  E   ++++
Sbjct: 874 WLTKNELNDEAAECFAEMLR 893



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 71/146 (48%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  + + L H+++ +N I   G   ++ A + +  +  + +  N I  +GA    +A
Sbjct: 776 VAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEA 835

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    +   G  S+A+ L  NTTL  + LT NE++ +      + ++  
Sbjct: 836 LRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVN 895

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
             LK + + +N    EG  ++ + ++
Sbjct: 896 QTLKHLWLIQNHITAEGTAQLARALQ 921



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           +A+ L +   L  + L  N I+ +GG  + +A+KN T + ++ +  NQ G+EG +   + 
Sbjct: 776 VAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     +R   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFSRLTVIR---LSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           +A+ L +   L  + L  N I+ +GG  + +A+KN T + ++ +  NQ G+EG +   + 
Sbjct: 776 VAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|399498004|emb|CCG20330.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
          Length = 553

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|395862595|ref|XP_003803527.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 3 isoform 4
            [Otolemur garnettii]
          Length = 1017

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 114/266 (42%), Gaps = 31/266 (11%)

Query: 221  LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC-------FALEELKLNNNGLGITGCK 273
            L T   L ELDLSDN  G  G++ L + L+   C         L EL L++N LG  G +
Sbjct: 738  LSTNQSLTELDLSDNTLGDSGMKVLCEALQHPSCNIQRLCNQKLAELDLSDNALGDFGIR 797

Query: 274  LLSKALHDCYESSKKEG------------------SP-LALKVFIAGRNRLENEGAKMLA 314
            LL   L   + + KK                    SP  +L     G N L + G  +L 
Sbjct: 798  LLCVGLKHLFCNLKKLWLVSCCLTSACCQDLASVLSPSRSLTRLYVGENTLGDSGVGILC 857

Query: 315  AVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
               K  +  L+++ +  +G+  V  TALS     N N  HL L  NT+   G   L + L
Sbjct: 858  EKAKHPQCNLQKLGLVNSGLSSVCCTALSSVLSSNPNFTHLYLRGNTLGDMGVKLLCEGL 917

Query: 374  SKLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
               P   L +L L +C L S     ++  LT N  L  ++L  N++   G + L + ++ 
Sbjct: 918  LH-PNCKLQVLELENCSLTSHCCWDLSTLLTSNQRLRKLSLGNNDLGDLGVMMLCEVLRQ 976

Query: 432  KTKLKQ-INVSENQFGEEGVEEMEKL 456
            ++ L Q + + E  F  E    +E L
Sbjct: 977  QSCLLQSLQLCEMYFNYETKRALETL 1002



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+  V  TALS     N    HL L  NT+   G   L + L   P   L 
Sbjct: 867  LQKLGLVNSGLSSVCCTALSSVLSSNPNFTHLYLRGNTLGDMGVKLLCEGLLH-PNCKLQ 925

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT N  L  ++L  N++   G + L + ++ ++ L Q + 
Sbjct: 926  VLELENCSLTSHCCWDLSTLLTSNQRLRKLSLGNNDLGDLGVMMLCEVLRQQSCLLQSLQ 985

Query: 129  VSENQFGEEGVEEMEKL 145
            + E  F  E    +E L
Sbjct: 986  LCEMYFNYETKRALETL 1002


>gi|119910057|ref|XP_001250847.1| PREDICTED: protein NLRC5 [Bos taurus]
 gi|297485288|ref|XP_002694836.1| PREDICTED: protein NLRC5 [Bos taurus]
 gi|296478078|tpg|DAA20193.1| TPA: nucleotide-binding oligomerization domain containing 1-like [Bos
            taurus]
          Length = 1868

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 90/384 (23%), Positives = 156/384 (40%), Gaps = 51/384 (13%)

Query: 78   LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
            + S G + +   L+    LE+++L+ N++  +G   L+ A++ K +LK++++S    G  
Sbjct: 1507 VSSKGLALLTSGLSHCHLLEELDLSNNQLGDEGTKVLLGALEGKCRLKRLDLSHLPLGGS 1566

Query: 138  GVEEMEKLMKSFGMAAALVLE----DDEGEC--SDEEQDEESEEENDSDAEGDNSNLSHN 191
             +  + + +    +  +L L     DD G C  S   +   S EE          +LSH 
Sbjct: 1567 TLAVLTQGLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEE---------LSLSH- 1616

Query: 192  DSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTG-ARLVELDLSDNAFGPIGVEGLADLLR 250
                            NQ  N   Q   ++  G   L ++DLS N  GP G   LA+ L 
Sbjct: 1617 ----------------NQIGNIGAQDLAAVLPGLPELRKIDLSANGIGPAGGARLAESL- 1659

Query: 251  SSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGA 310
             + C  LEEL L  N LG            DC      +G P  L+V     + L  EG 
Sbjct: 1660 -TLCRHLEELMLGCNALG------------DCTALGLAKGLPQHLRVLHLPSSHLSPEGV 1706

Query: 311  KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
              L         +E + + +N +   G+      F     LR L+L    I  + A PL 
Sbjct: 1707 LSLGQALDGCPHVEEISLAENSLAG-GVPHFHQGFPV---LRKLDLVSCEIDNQTAKPLA 1762

Query: 371  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
             +     +L  + L   LL    A+ +A+ L     L+ ++L  N+I+  G   L + + 
Sbjct: 1763 ASFVLCLALEEITLSWNLLGDEAAAELARVLPQMGRLKRMDLEKNQITAYGAWLLAEGLA 1822

Query: 431  NKTKLKQINVSENQFGEEGVEEME 454
              + ++ I +  N+   +  + ++
Sbjct: 1823 QGSGIQVIRLWNNRIPPDMAQHLQ 1846



 Score = 47.8 bits (112), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 62/138 (44%)

Query: 1    MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
            +L +       LE +++  N +   G   L  A E   +L+ L+L+   +       L Q
Sbjct: 1514 LLTSGLSHCHLLEELDLSNNQLGDEGTKVLLGALEGKCRLKRLDLSHLPLGGSTLAVLTQ 1573

Query: 61   ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
             L  +  L  L L    +   G   ++K L   T+LE+++L+ N+I   G  DL   +  
Sbjct: 1574 GLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAVLPG 1633

Query: 121  KTKLKQINVSENQFGEEG 138
              +L++I++S N  G  G
Sbjct: 1634 LPELRKIDLSANGIGPAG 1651



 Score = 47.4 bits (111), Expect = 0.016,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 40/221 (18%)

Query: 258  EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVF 317
            +  +L ++ +   G  LL+  L  C+           L+      N+L +EG K+L    
Sbjct: 1498 KNFRLTSSCVSSKGLALLTSGLSHCH----------LLEELDLSNNQLGDEGTKVLLGAL 1547

Query: 318  K---KLKTLERVEMPQNG-------------------------IYHVGITALSDAFEENK 349
            +   +LK L+   +P  G                         I  VG   LS A     
Sbjct: 1548 EGKCRLKRLDLSHLPLGGSTLAVLTQGLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAAT 1607

Query: 350  NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
            +L  L+L+ N I   GA  L   L  LP L  ++L    +  AG + +A+ LT    LE+
Sbjct: 1608 SLEELSLSHNQIGNIGAQDLAAVLPGLPELRKIDLSANGIGPAGGARLAESLTLCRHLEE 1667

Query: 410  VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            + L CN +     L L K +     L+ +++  +    EGV
Sbjct: 1668 LMLGCNALGDCTALGLAKGLPQ--HLRVLHLPSSHLSPEGV 1706



 Score = 47.0 bits (110), Expect = 0.019,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 2/131 (1%)

Query: 9    LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
            +  L+ + + ++ I  VG   LS A      L  L+L+ N I   GA  L   L  LP L
Sbjct: 1578 MTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAVLPGLPEL 1637

Query: 69   AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
              ++L    +  AG + +A+ LT    LE++ L CN +     L L K +     L+ ++
Sbjct: 1638 RKIDLSANGIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKGLPQ--HLRVLH 1695

Query: 129  VSENQFGEEGV 139
            +  +    EGV
Sbjct: 1696 LPSSHLSPEGV 1706



 Score = 46.2 bits (108), Expect = 0.032,   Method: Composition-based stats.
 Identities = 81/396 (20%), Positives = 157/396 (39%), Gaps = 57/396 (14%)

Query: 58   LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
            L ++L  + SL  L L    + + G S + + L     LE+V+   N++  +  L++V+ 
Sbjct: 714  LSKSLPTMGSLKKLGLAGSKITAQGISHLVQALPFCPQLEEVSFQDNQLKDREVLNIVEV 773

Query: 118  MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL-VLEDDEGECSDEEQDEESEEE 176
            +    +L+++++S N      +  + K+  +      L V E D         + + E +
Sbjct: 774  LSCLPRLQKLDLSRNNVSVSTLLSLTKVAVTCPTIRMLQVRETDLIFLLSPPTETDPELQ 833

Query: 177  NDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNA 236
             D D +G                      N+NQ      +S          + L L    
Sbjct: 834  GDPDLQG----------------------NANQRKEAQRRS----------LALRLQKCQ 861

Query: 237  FGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALK 296
             G   VE L   LR      L+E+ L+ N L   GC+L+++A    + + K + S     
Sbjct: 862  LGVHDVEVLIAQLREGP--QLDEVDLSGNQLKDKGCQLMAEAAPQLHITKKLDLSD---- 915

Query: 297  VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
                  N L   G   + +V    +TL   E+  + ++   +   +   EE + ++    
Sbjct: 916  ------NELSVAGVLGVLSVVNTYQTL--TELHISLLHKTVVFTFAPELEEQEGIQKRAT 967

Query: 357  NDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
              +++ ++        +S  PSL    + L  C L++     + K L  +  L  ++L+ 
Sbjct: 968  FPDSLMFQ--------MSSEPSLRSPRIRLTHCALQAQRLELLCKALGGSCRLSHLDLSG 1019

Query: 415  NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            N +  +G   L + +     L+ +N+SEN    EGV
Sbjct: 1020 NALGDEGVALLARLLPGLGSLQSLNLSENHLSLEGV 1055



 Score = 41.6 bits (96), Expect = 0.95,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 30/186 (16%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            LAAV   L  L  +++  NGI   G   L+++    + L  L L  N +    A+ L + 
Sbjct: 1627 LAAVLPGLPELRKIDLSANGIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKG 1686

Query: 62   LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG---------- 111
            L +   L +L+L    L   G  S+ + L     +E+++L  N  S+ GG          
Sbjct: 1687 LPQ--HLRVLHLPSSHLSPEGVLSLGQALDGCPHVEEISLAEN--SLAGGVPHFHQGFPV 1742

Query: 112  ---LDLVKA-MKNKT------------KLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
               LDLV   + N+T             L++I +S N  G+E   E+ +++   G    +
Sbjct: 1743 LRKLDLVSCEIDNQTAKPLAASFVLCLALEEITLSWNLLGDEAAAELARVLPQMGRLKRM 1802

Query: 156  VLEDDE 161
             LE ++
Sbjct: 1803 DLEKNQ 1808



 Score = 40.4 bits (93), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 58/121 (47%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            G+  L+        L  L+L++N +  +G   L  AL     L  L+L    L  +  + 
Sbjct: 1511 GLALLTSGLSHCHLLEELDLSNNQLGDEGTKVLLGALEGKCRLKRLDLSHLPLGGSTLAV 1570

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
            + + L   T L+ + L+ + I   G   L KA++  T L+++++S NQ G  G +++  +
Sbjct: 1571 LTQGLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAV 1630

Query: 146  M 146
            +
Sbjct: 1631 L 1631



 Score = 40.0 bits (92), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 58/121 (47%)

Query: 337  GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
            G+  L+        L  L+L++N +  +G   L  AL     L  L+L    L  +  + 
Sbjct: 1511 GLALLTSGLSHCHLLEELDLSNNQLGDEGTKVLLGALEGKCRLKRLDLSHLPLGGSTLAV 1570

Query: 397  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
            + + L   T L+ + L+ + I   G   L KA++  T L+++++S NQ G  G +++  +
Sbjct: 1571 LTQGLGHMTLLQSLRLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAV 1630

Query: 457  M 457
            +
Sbjct: 1631 L 1631


>gi|156321262|ref|XP_001618237.1| hypothetical protein NEMVEDRAFT_v1g155247 [Nematostella vectensis]
 gi|156198145|gb|EDO26137.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 6/181 (3%)

Query: 267 LGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
           LGI G  +  +A     E  +   +   L +F     ++ + GA+ +A+   +  TLE++
Sbjct: 74  LGIRGDNMTPEAGRALGEMFRHNTTITCLSLF---HGKIGDSGAQGIASGLSQNTTLEKI 130

Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
           ++   GI   G++AL+   +   N  HL+L+ N I  KGA  + + +     L  L +  
Sbjct: 131 QIENAGIGATGVSALAKVIQ---NATHLDLSRNIIGTKGAKAIAKVIENSCKLKYLRIDR 187

Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
           C +   G   IAK L+ NT LE++++ C  I  +G  +L +++     L+ + ++ N   
Sbjct: 188 CNIDVLGVRDIAKALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTITYNNIS 247

Query: 447 E 447
           E
Sbjct: 248 E 248



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           TLE +++   GI   G++AL+   +      HL+L+ N I  KGA  + + +     L  
Sbjct: 126 TLEKIQIENAGIGATGVSALAKVIQNAT---HLDLSRNIIGTKGAKAIAKVIENSCKLKY 182

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           L +  C +   G   IAK L+ NT LE++++ C  I  +G  +L +++     L+ + ++
Sbjct: 183 LRIDRCNIDVLGVRDIAKALSKNTNLEELSVACAGIDDEGMCELARSVAKNKSLQVLTIT 242

Query: 131 ENQFGE 136
            N   E
Sbjct: 243 YNNISE 248



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 3/156 (1%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N L +  A  LA V +   +L  V +    +   G+ ++++A   N  +R L +  + +T
Sbjct: 23  NSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVNTTVRTLGIRGDNMT 82

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +    LG+      ++  L+L    +  +GA  IA  L+ NTTLE + +    I   G 
Sbjct: 83  PEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIENAGIGATGV 142

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             L K ++N T L   ++S N  G +G + + K+++
Sbjct: 143 SALAKVIQNATHL---DLSRNIIGTKGAKAIAKVIE 175



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 3/146 (2%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA V +   +L  V +    +   G+ ++++A   N  +R L +  + +T +    LG+ 
Sbjct: 33  LAKVLEVNTSLNDVFIGGEYLGDAGVASIAEALIVNTTVRTLGIRGDNMTPEAGRALGEM 92

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
                ++  L+L    +  +GA  IA  L+ NTTLE + +    I   G   L K ++N 
Sbjct: 93  FRHNTTITCLSLFHGKIGDSGAQGIASGLSQNTTLEKIQIENAGIGATGVSALAKVIQNA 152

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L   ++S N  G +G + + K+++
Sbjct: 153 THL---DLSRNIIGTKGAKAIAKVIE 175



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 62/306 (20%)

Query: 28  TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
           T+L  + + N  L  ++++ N++    A  L + L    SL  + +G   L  AG +SIA
Sbjct: 3   TSLFKSLKNNSTLSAIHIHFNSLGDACASELAKVLEVNTSLNDVFIGGEYLGDAGVASIA 62

Query: 88  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
           + L  NTT+  + +  + ++ + G  L +  ++ T +  +++   + G+ G +       
Sbjct: 63  EALIVNTTVRTLGIRGDNMTPEAGRALGEMFRHNTTITCLSLFHGKIGDSGAQ------- 115

Query: 148 SFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNS 207
             G+A+ L         S     E+ + EN        S L+    N +H          
Sbjct: 116 --GIASGL---------SQNTTLEKIQIENAGIGATGVSALAKVIQNATH---------- 154

Query: 208 NQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGL 267
                                 LDLS N  G  G + +A ++ +SC   L+ L+++   +
Sbjct: 155 ----------------------LDLSRNIIGTKGAKAIAKVIENSC--KLKYLRIDRCNI 190

Query: 268 GITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVE 327
            + G + ++KAL        K  +   L V  AG   +++EG   LA    K K+L+ + 
Sbjct: 191 DVLGVRDIAKAL-------SKNTNLEELSVACAG---IDDEGMCELARSVAKNKSLQVLT 240

Query: 328 MPQNGI 333
           +  N I
Sbjct: 241 ITYNNI 246


>gi|399498106|emb|CCG20381.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L  +G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMTDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH    ++  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNTTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L  + I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMTDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  +      GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++NT   +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMTDGISQEAANAVSELVPSTEKLKVLHFHNNTTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   LE        +   G + L +A      L+ L+L DN    +  + L +A
Sbjct: 290 IAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKA 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK  +L  + L    L+  GA +IA  L D+  +L  + +  N+I+ +    +   +  
Sbjct: 350 LSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAA 409

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++++ EN+  +EG  ++ K ++
Sbjct: 410 KQLLAKLSLGENELKDEGAIQIAKALE 436



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMTDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  +      GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNTTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399497830|emb|CCG20243.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     L +S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLFQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V++  
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V++  N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMNSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A    F+    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLFQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +F+    LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + +
Sbjct: 237 LFQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKR 296

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            P L         + S G S + + L   + L+ ++L  N    + GL L KA+     L
Sbjct: 297 SPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALIKHENL 356

Query: 125 KQINVSENQFGEEG 138
            +I +S     +EG
Sbjct: 357 TEIYLSYLNLEDEG 370


>gi|355560721|gb|EHH17407.1| Caspase recruitment domain-containing protein 4 [Macaca mulatta]
          Length = 953

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N ++ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A++N T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ   +G  ++
Sbjct: 896 QTLKHLWLIQNQITAKGTAQL 916



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEM 142
           K + + +NQ   +G  ++
Sbjct: 899 KHLWLIQNQITAKGTAQL 916



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  K++  V M  N +   G  A ++A   +  L  L+L  N ++ +G   L +A
Sbjct: 804 LALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARA 863

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL IL L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 864 LQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNN 923

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 924 TGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFS---RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     +R   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFSRLTVIR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|399498046|emb|CCG20351.1| Ran GTPase activating protein 2 [Solanum tarijense]
          Length = 553

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAFAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PS+A+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSVAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  I+K L  +  L +V+++ 
Sbjct: 389 EMAGNDITVEAASAIASCIAAKQLLAKLSLGENELKDEGAIQISKALERHRHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  I+K L  +  L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQISKALERHRHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAFAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|338719804|ref|XP_001916614.2| PREDICTED: uncharacterized protein C14orf166B-like [Equus caballus]
          Length = 506

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 122/257 (47%), Gaps = 23/257 (8%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           ++L +   ++ L+L DN     G+  L  +LR +  + L+EL L++N LG+ G +++S+ 
Sbjct: 129 IALVSNTAVMTLELEDNCIMAEGIVSLTQMLREN--YYLQELNLSDNDLGLEGARIISEF 186

Query: 279 LHDCYES-------------------SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           L     S                   S+   S   +K      N+  ++G + L  +   
Sbjct: 187 LQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSHNQFSDKGGEHLGQMLAL 246

Query: 320 LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
              L+ +++  N  Y  G  AL +    N  L+ L+++ N    +GA  LG  L    SL
Sbjct: 247 NVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALGDVLRLNNSL 306

Query: 380 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQ 437
           A L++    + + G S I++ L  N +L+ + L  N +S+ G + L+ ++K   K+ +++
Sbjct: 307 AYLDVSGNDISNEGVSKISRGLELNDSLKVLKLFLNPMSMDGAVLLILSIKRNPKSSMEE 366

Query: 438 INVSENQFGEEGVEEME 454
           +++S     E+ V+ ++
Sbjct: 367 LDISNVLVSEQFVKTLD 383



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
           +V +  +G+   G  A++ A   N  +  L L DN I  +G + L Q L +   L  LNL
Sbjct: 111 YVNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENYYLQELNL 170

Query: 74  GDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
            D  L   GA  I+++L  NT +L ++ L+ N    +    L +A+ +  ++K +++S N
Sbjct: 171 SDNDLGLEGARIISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSHN 230

Query: 133 QFGEEGVEEMEKLM 146
           QF ++G E + +++
Sbjct: 231 QFSDKGGEHLGQML 244



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 29/180 (16%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAI 367
            G K +A        +  +E+  N I   GI +L+    EN  L+ LNL+DN +  +GA 
Sbjct: 122 RGTKAIAIALVSNTAVMTLELEDNCIMAEGIVSLTQMLRENYYLQELNLSDNDLGLEGAR 181

Query: 368 P-----------------------------LGQALSKLPSLAILNLGDCLLKSAGASSIA 398
                                         L QALS    +  L+L        G   + 
Sbjct: 182 IISEFLQRNTSSLSNLQLSGNNFKDEAAELLSQALSSDYRIKSLDLSHNQFSDKGGEHLG 241

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + L  N  L+ ++L+ N    +G + L   ++    LK+++VS N FG EG   +  +++
Sbjct: 242 QMLALNVGLQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALGDVLR 301



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 29/162 (17%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIP----------------- 57
           +E+  N I   GI +L+    EN  L+ LNL+DN +  +GA                   
Sbjct: 140 LELEDNCIMAEGIVSLTQMLRENYYLQELNLSDNDLGLEGARIISEFLQRNTSSLSNLQL 199

Query: 58  ------------LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 105
                       L QALS    +  L+L        G   + + L  N  L+ ++L+ N 
Sbjct: 200 SGNNFKDEAAELLSQALSSDYRIKSLDLSHNQFSDKGGEHLGQMLALNVGLQSLDLSWNH 259

Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
              +G + L   ++    LK+++VS N FG EG   +  +++
Sbjct: 260 FYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALGDVLR 301



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 29/279 (10%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           G +P+   +  +   + +NL    L   G  +IA  L  NT +  + L  N I  +G + 
Sbjct: 96  GVVPVSYFIRNMEE-SYVNLNHHGLGPRGTKAIAIALVSNTAVMTLELEDNCIMAEGIVS 154

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLEDDEGECSDEEQDEE 172
           L + ++    L+++N+S+N  G EG   + E L ++    + L L    G    +E  E 
Sbjct: 155 LTQMLRENYYLQELNLSDNDLGLEGARIISEFLQRNTSSLSNLQL---SGNNFKDEAAEL 211

Query: 173 SEEENDSDAEGDNSNLSHN---DSNHSHNASNQSHNNSNQSHNTSNQSHMS--------- 220
             +   SD    + +LSHN   D    H     + N   QS + S     +         
Sbjct: 212 LSQALSSDYRIKSLDLSHNQFSDKGGEHLGQMLALNVGLQSLDLSWNHFYTRGAVALCNG 271

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L+T   L +LD+S N FG  G   L D+LR +   A   L ++ N +   G   +S+ L 
Sbjct: 272 LRTNVTLKKLDVSMNGFGNEGATALGDVLRLNNSLAY--LDVSGNDISNEGVSKISRGL- 328

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
           +  +S K       LK+F+   N +  +GA +L    K+
Sbjct: 329 ELNDSLK------VLKLFL---NPMSMDGAVLLILSIKR 358



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ +++  N  Y  G  AL +    N  L+ L+++ N    +GA  LG  L    SLA L
Sbjct: 250 LQSLDLSWNHFYTRGAVALCNGLRTNVTLKKLDVSMNGFGNEGATALGDVLRLNNSLAYL 309

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN--KTKLKQINV 129
           ++    + + G S I++ L  N +L+ + L  N +S+ G + L+ ++K   K+ ++++++
Sbjct: 310 DVSGNDISNEGVSKISRGLELNDSLKVLKLFLNPMSMDGAVLLILSIKRNPKSSMEELDI 369

Query: 130 SENQFGEEGVEEME 143
           S     E+ V+ ++
Sbjct: 370 SNVLVSEQFVKTLD 383



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 56/115 (48%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           LS A   + +++ L+L+ N  + KG   LGQ L+    L  L+L      + GA ++   
Sbjct: 212 LSQALSSDYRIKSLDLSHNQFSDKGGEHLGQMLALNVGLQSLDLSWNHFYTRGAVALCNG 271

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           L  N TL+ ++++ N    +G   L   ++    L  ++VS N    EGV ++ +
Sbjct: 272 LRTNVTLKKLDVSMNGFGNEGATALGDVLRLNNSLAYLDVSGNDISNEGVSKISR 326


>gi|355707411|gb|AES02952.1| NLR family, CARD domain containing 3 [Mustela putorius furo]
          Length = 175

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%)

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           ++++ + +N I + G  AL+ +   N++L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 33  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTFL 92

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
           +L    ++  GA S+A+ L  N TL  ++L  N I   G   +   +K    LK++  S 
Sbjct: 93  SLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQQMADTLKQNRSLKELRFSS 152

Query: 443 NQFGEEGVEEMEKLMK 458
           N  G+ G E + K +K
Sbjct: 153 NSIGDGGAEALAKALK 168



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 68/136 (50%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           ++ + + +N I + G  AL+ +   N+ L  L+L  N+I  +GA  L  AL    +L  L
Sbjct: 33  IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTFL 92

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L    ++  GA S+A+ L  N TL  ++L  N I   G   +   +K    LK++  S 
Sbjct: 93  SLQSNAIRDNGARSVAEALAANRTLSVLHLQKNTIGPVGAQQMADTLKQNRSLKELRFSS 152

Query: 132 NQFGEEGVEEMEKLMK 147
           N  G+ G E + K +K
Sbjct: 153 NSIGDGGAEALAKALK 168



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 70/135 (51%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ N+GAK LA      ++L  +++  N I   G  AL+DA + N+ L  L+L  N I 
Sbjct: 41  NQISNKGAKALARSLLVNRSLTSLDLRSNSIGPQGAKALADALKINRTLTFLSLQSNAIR 100

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL+   +L++L+L    +   GA  +A  L  N +L+++  + N I   G 
Sbjct: 101 DNGARSVAEALAANRTLSVLHLQKNTIGPVGAQQMADTLKQNRSLKELRFSSNSIGDGGA 160

Query: 423 LDLVKAMKNKTKLKQ 437
             L KA+K   +  Q
Sbjct: 161 EALAKALKPAEQFHQ 175



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 40/154 (25%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           SL     L  LDL  N+ GP G + LAD            LK+N     +T   L S A+
Sbjct: 54  SLLVNRSLTSLDLRSNSIGPQGAKALAD-----------ALKINRT---LTFLSLQSNAI 99

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
            D                           GA+ +A      +TL  + + +N I  VG  
Sbjct: 100 RD--------------------------NGARSVAEALAANRTLSVLHLQKNTIGPVGAQ 133

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL 373
            ++D  ++N++L+ L  + N+I   GA  L +AL
Sbjct: 134 QMADTLKQNRSLKELRFSSNSIGDGGAEALAKAL 167


>gi|146105280|ref|XP_001470019.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|134074389|emb|CAM73141.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 1123

 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 105/479 (21%), Positives = 181/479 (37%), Gaps = 112/479 (23%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            +  L+ A   N  +R LNL+ N+    GA  L   L+   ++  LNL  C + + GA +
Sbjct: 521 SVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELNLFSCTIGNRGAQN 580

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L  N  L+ ++L+ N +       L   ++  T L++  +   +   E VE+++  
Sbjct: 581 LCKALATNQALQSLDLSNNMMDADSLSALPLVLRENTALREFKLERTRVASEFVEQVK-- 638

Query: 146 MKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHN 205
                MA +L       EC+  ++       +D DA      LS  D     +    S  
Sbjct: 639 -----MACSL-----NRECAAVKRIY--YRLHDGDASLTKIELSSPDEERVIDDQTVSTI 686

Query: 206 NSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNN 265
            +   +NTS +             +DLS N  G                           
Sbjct: 687 CTVLRNNTSVEV------------IDLSGNVIGK-------------------------- 708

Query: 266 GLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 325
                GC  L+  L +C    +K          I  +N ++++ A  LAA F K+KTL  
Sbjct: 709 ----NGCSALAATLSECTSKVRK---------IILSKNPIDDDAAAELAACFPKIKTLRE 755

Query: 326 VEMPQNGIYHVGITALSDAFEENKN-------------------LRHLNLNDNTITYK-- 364
           V +    I  +G+ AL+   EEN +                   +R+L LN+     K  
Sbjct: 756 VILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALNNGPAALKRI 815

Query: 365 ------GAI--------P------------LGQALSKLPSLAILNLGDCLLKSAGASSIA 398
                 G I        P            L  +L + P+L  LNL    + SA    I 
Sbjct: 816 TLSIDAGVIVDDVDLSRPVDCSMDDSLCKFLCASLVRCPTLRSLNLAHNEISSAAVPYIL 875

Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           + +    +L  ++L+ N+I   G   ++  ++  + L+ +N + N F  E +E + +L+
Sbjct: 876 EVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSNLRSVNFAGNLFSAESLERVSQLV 934



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 112/279 (40%), Gaps = 61/279 (21%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           E++L  +A  P+ +  L D + +S    ++ L ++N+ +   G +LL++AL       +K
Sbjct: 348 EVNLQWDAPLPMCMNYLVDYIAASS--VIQHLNISNSLIDDAGLELLAEAL-------QK 398

Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEE 347
             S   LKV      R+   G + L AV +K +  ++ V +  N +    +  ++ A   
Sbjct: 399 NTS---LKVIELANCRITATGIQKLFAVLQKGICLVQEVNIANNNLDEGSVQYITAALRA 455

Query: 348 NKNLRHLNLNDNTIT--------------------YKGAIPL------------------ 369
           N  L+ LN+N N                        +  +PL                  
Sbjct: 456 NPRLKTLNINVNPAISPASMQEIAGLTMVNRAPPQIRSVLPLIENNSKDVVVLDFSGKGV 515

Query: 370 ----------GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
                      QAL    ++  LNL        GAS +A YL DN T+ ++NL    I  
Sbjct: 516 TLDDDSVWLLAQALRLNSTVRQLNLSHNSFGDTGASYLADYLADNRTMLELNLFSCTIGN 575

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           +G  +L KA+     L+ +++S N    + +  +  +++
Sbjct: 576 RGAQNLCKALATNQALQSLDLSNNMMDADSLSALPLVLR 614



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 121/325 (37%), Gaps = 83/325 (25%)

Query: 6    FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK-------------------LRHLNLN 46
            F K+KTL  V +    I  +G+ AL+   EEN                     +R+L LN
Sbjct: 747  FPKIKTLREVILYNTNITKIGMEALAKGLEENASIVWIGITDDDTADENVSLLMRNLALN 806

Query: 47   DNTITYK--------GAI--------P------------LGQALSKLPSLAILNLGDCLL 78
            +     K        G I        P            L  +L + P+L  LNL    +
Sbjct: 807  NGPAALKRITLSIDAGVIVDDVDLSRPVDCSMDDSLCKFLCASLVRCPTLRSLNLAHNEI 866

Query: 79   KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
             SA    I + +    +L  ++L+ N+I   G   ++  ++  + L+ +N + N F  E 
Sbjct: 867  SSAAVPYILEVVEMCPSLASLDLSGNQIDESGAQQIIACLERVSNLRSVNFAGNLFSAES 926

Query: 139  VEEMEKLMKSFGMAA----ALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSN 194
            +E + +L+ +  M +     L L    G+          +  ND D  G  ++    D  
Sbjct: 927  LERVSQLV-ALNMGSEVLKKLYLTTTRGD----------QLPNDIDLNGTTNSYRLTDEE 975

Query: 195  HSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
                A                     L+  + +  LDL  N+FG  G   +A++LR +  
Sbjct: 976  VVVLAG-------------------LLQNSSTVKSLDLGSNSFGDEGCIAIAEVLRFN-- 1014

Query: 255  FALEELKLNNNGLGITGCKLLSKAL 279
              +E L L  N +G  G + L  AL
Sbjct: 1015 HTIEALNLAGNAIGSKGGEALYFAL 1039



 Score = 38.9 bits (89), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 27/192 (14%)

Query: 272  CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
            CK L  +L  C         P  L+      N + +     +  V +   +L  +++  N
Sbjct: 843  CKFLCASLVRC---------P-TLRSLNLAHNEISSAAVPYILEVVEMCPSLASLDLSGN 892

Query: 332  GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK- 390
             I   G   +    E   NLR +N       + G +   ++L ++  L  LN+G  +LK 
Sbjct: 893  QIDESGAQQIIACLERVSNLRSVN-------FAGNLFSAESLERVSQLVALNMGSEVLKK 945

Query: 391  ----SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
                +     +   +  N T     LT  E+ V  GL     ++N + +K +++  N FG
Sbjct: 946  LYLTTTRGDQLPNDIDLNGTTNSYRLTDEEVVVLAGL-----LQNSSTVKSLDLGSNSFG 1000

Query: 447  EEGVEEMEKLMK 458
            +EG   + ++++
Sbjct: 1001 DEGCIAIAEVLR 1012


>gi|399498052|emb|CCG20354.1| Ran GTPase activating protein 2 [Solanum trifidum]
 gi|399498056|emb|CCG20356.1| Ran GTPase activating protein 2 [Solanum trifidum]
          Length = 553

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +   L    PSL +L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANTLKDSAPSLVVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITADAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399498092|emb|CCG20374.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGAEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEAPGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +  + GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++++ +
Sbjct: 276 HFHNNMTGAEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +  + GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++
Sbjct: 272 LKVLHFHNNMTGAEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 59/127 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N    +GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGAEGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + +     + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEG 138
               +EG
Sbjct: 364 LNLEDEG 370


>gi|355707544|gb|AES02988.1| nucleotide-binding oligomerization domain containing 1 [Mustela
           putorius furo]
          Length = 261

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 12/230 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L + L          L L NN +   G + +++ L +C  
Sbjct: 37  SRLTVIRLSVNQITDSGVKVLYEELTKYKILTF--LGLYNNQITDVGARYIARILDEC-- 92

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G N++ +EG K LA   K  K++  + M  N I   G  A ++A
Sbjct: 93  ---KGLTHLKL-----GENKITSEGGKCLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAEA 144

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L +L+L  N I+ +G   L QAL +  SL I  L    L    A S+A+ L  N
Sbjct: 145 LRNHPSLTNLSLAFNGISREGGKSLAQALEQNTSLRIFWLTKNELDDEVAESLAEMLKVN 204

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            TL+ + L  N+I+ +G   L  A++  T + +I ++ N    E  +  E
Sbjct: 205 QTLKHLWLIQNQITAKGIAQLADALQRNTGIMEICLNGNLIKPEEAKVFE 254



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 70/141 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  + K L H+++ +N I   G   L+ A + +K +  + +  N I  +GA    +A
Sbjct: 85  IARILDECKGLTHLKLGENKITSEGGKCLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAEA 144

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    +   G  S+A+ L  NT+L    LT NE+  +    L + +K  
Sbjct: 145 LRNHPSLTNLSLAFNGISREGGKSLAQALEQNTSLRIFWLTKNELDDEVAESLAEMLKVN 204

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             LK + + +NQ   +G+ ++
Sbjct: 205 QTLKHLWLIQNQITAKGIAQL 225



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   L  L L +  +   GA  
Sbjct: 28  GVRELQPCFS---RLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARY 84

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA+ L +   L  + L  N+I+ +GG  L  A+KN   + +I +  N+ G+EG +   + 
Sbjct: 85  IARILDECKGLTHLKLGENKITSEGGKCLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAEA 144

Query: 146 MK 147
           ++
Sbjct: 145 LR 146



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     L  + L+ N IT  G   L + L+K   L  L L +  +   GA  
Sbjct: 28  GVRELQPCFSR---LTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARY 84

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           IA+ L +   L  + L  N+I+ +GG  L  A+KN   + +I +  N+ G+EG +   + 
Sbjct: 85  IARILDECKGLTHLKLGENKITSEGGKCLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAEA 144

Query: 457 MK 458
           ++
Sbjct: 145 LR 146


>gi|66821673|ref|XP_644281.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|60472031|gb|EAL69984.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 880

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 108/480 (22%), Positives = 210/480 (43%), Gaps = 69/480 (14%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHL-----NLNDNTITYKGA 55
           +    F+   ++ +    Q  I      A+ +A   N  + HL     NL+D++I     
Sbjct: 429 LFTQFFEVANSMTYFRFYQKWISPENFMAIGNALRINTSITHLSFRHGNLDDDSID---- 484

Query: 56  IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDL 114
             +  ALS+  ++  ++     L +A A  +A+ ++ N T+L+ ++   N I+ +GG+ L
Sbjct: 485 -AVINALSENTTIESIDFRGNKLGNATAIKLAQLMSTNKTSLKTIDFFYNHIAPEGGIAL 543

Query: 115 VKAMKNKTKLKQINVSENQF-GEEGVEEMEKLMKSFGMAAALV--LEDDEGECSDEEQDE 171
            +AMK   KL+++ +  N   G+  +     L  +  + +  +  ++D  G    E   +
Sbjct: 544 ARAMKTNNKLERLYLRLNYINGQTAIMLGNSLAHNSTLKSVHLDHIDDQSGAVFFESLGK 603

Query: 172 ESE----EENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARL 227
            +     E N S+ + ++++ S      S   S     N       SN+  +SL + AR 
Sbjct: 604 STTTVLNELNLSNCQLESASASEISKTLSKKTSTLVDINFK-----SNKLGVSLISIARA 658

Query: 228 VE-------LDLSDN-AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +E       L+LSDN  F   G   LAD L ++    +  L L+ N LG    + +++AL
Sbjct: 659 LEVNSTITRLNLSDNRIFDTSGGWELADALSNNKT--ITALSLSTNSLGNGFAEGIARAL 716

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
           +          S  +LK      N+++  GAK +A      KTL+ + M QN +      
Sbjct: 717 N---------SSTCSLKSLDISGNQIDYAGAKYIAEALSNNKTLKLLNMSQNKLSPQFGQ 767

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            ++D+ + N++L HL L+  ++  KG++P+   L+                         
Sbjct: 768 LIADSLKVNRSLIHLELSYTSLGDKGSLPIASLLAN------------------------ 803

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
              D T L  +N+  NEI+ + G+   +++   T ++ +++S N+      E  E+ +K+
Sbjct: 804 ---DGTHLIRLNMNENEINDKVGIIFAESLATNTHIQVLDLSFNKLTYRSKEVFERSLKT 860


>gi|291384548|ref|XP_002708639.1| PREDICTED: NLR family, pyrin domain containing 14 [Oryctolagus
            cuniculus]
          Length = 1102

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 16/240 (6%)

Query: 219  MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
            ++L T  RL  L L+DN  G  GV+ ++D L+   C  L+ L L    L     + LS +
Sbjct: 837  LALITNTRLTHLCLTDNVLGDGGVKFMSDALQHPQC-TLQSLVLRRCHLTSLSSRCLSTS 895

Query: 279  LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVG 337
            L   Y  S +    LAL       N L++EGAK+L  VF+    +L+ VE+    I    
Sbjct: 896  LL--YNKSLRHLD-LAL-------NFLQDEGAKLLCDVFRHPSCSLQDVELVGCAITSAC 945

Query: 338  ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGAS 395
               L+ A   N N+  ++L +N +   G   L  AL + P+  I  L L  C L S    
Sbjct: 946  CLDLASAILNNPNIWSMDLGNNNLQDGGVKILCDAL-RHPNCNIQKLGLAYCGLTSLCCR 1004

Query: 396  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEME 454
             ++  L  N  L  +NLT N +  +G   L + +++ + KL+ + + +  F EE  + +E
Sbjct: 1005 DLSSTLISNQRLRKINLTQNPLGSEGIKKLCEVLRSPQCKLQTLGLCKEAFDEEAQKLLE 1064



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 15/216 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L     L+ LDL+ +  G  GV+ L + L+   C  L+ L+L +  L    C  +SKAL 
Sbjct: 725 LTQNQHLMHLDLTGSDIGDNGVKALCEALKHPRC-KLQSLRLESCDLTTVCCLNISKAL- 782

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
                        +L       N L ++G K+L    +  K  LER+ +   G+   G  
Sbjct: 783 ---------IRNQSLGFLNLSTNNLLDDGVKLLCEALRHPKCPLERLSLESCGLTEAGCE 833

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSI 397
            LS A   N  L HL L DN +   G   +  AL   P  +L  L L  C L S  +  +
Sbjct: 834 DLSLALITNTRLTHLCLTDNVLGDGGVKFMSDALQH-PQCTLQSLVLRRCHLTSLSSRCL 892

Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
           +  L  N +L  ++L  N +  +G   L    ++ +
Sbjct: 893 STSLLYNKSLRHLDLALNFLQDEGAKLLCDVFRHPS 928



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 146/379 (38%), Gaps = 61/379 (16%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            L H+++  + I   G+ AL +A +  + KL+ L L    +T    + + +AL +  SL  
Sbjct: 731  LMHLDLTGSDIGDNGVKALCEALKHPRCKLQSLRLESCDLTTVCCLNISKALIRNQSLGF 790

Query: 71   LNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            LNL    L   G   + + L      LE ++L    ++  G  DL  A+   T+L  + +
Sbjct: 791  LNLSTNNLLDDGVKLLCEALRHPKCPLERLSLESCGLTEAGCEDLSLALITNTRLTHLCL 850

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
            ++N  G+ GV+ M                                    SDA      L 
Sbjct: 851  TDNVLGDGGVKFM------------------------------------SDA------LQ 868

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
            H           + H  S  S   S     SL     L  LDL+ N     G + L D+ 
Sbjct: 869  HPQCTLQSLVLRRCHLTSLSSRCLST----SLLYNKSLRHLDLALNFLQDEGAKLLCDVF 924

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            R   C +L++++L        GC + S    D   +     +  ++ +   G N L++ G
Sbjct: 925  RHPSC-SLQDVEL-------VGCAITSACCLDLASAILNNPNIWSMDL---GNNNLQDGG 973

Query: 310  AKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
             K+L    +     ++++ +   G+  +    LS     N+ LR +NL  N +  +G   
Sbjct: 974  VKILCDALRHPNCNIQKLGLAYCGLTSLCCRDLSSTLISNQRLRKINLTQNPLGSEGIKK 1033

Query: 369  LGQALSKLPSLAILNLGDC 387
            L + L + P   +  LG C
Sbjct: 1034 LCEVL-RSPQCKLQTLGLC 1051



 Score = 42.0 bits (97), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 2/141 (1%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
            K+L H+++  N +   G   L D F      L+ + L    IT    + L  A+   P++
Sbjct: 900  KSLRHLDLALNFLQDEGAKLLCDVFRHPSCSLQDVELVGCAITSACCLDLASAILNNPNI 959

Query: 69   AILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
              ++LG+  L+  G   +   L   N  ++ + L    ++     DL   + +  +L++I
Sbjct: 960  WSMDLGNNNLQDGGVKILCDALRHPNCNIQKLGLAYCGLTSLCCRDLSSTLISNQRLRKI 1019

Query: 128  NVSENQFGEEGVEEMEKLMKS 148
            N+++N  G EG++++ ++++S
Sbjct: 1020 NLTQNPLGSEGIKKLCEVLRS 1040


>gi|402863820|ref|XP_003896196.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Papio anubis]
          Length = 953

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVIRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N ++ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A++N T + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQNNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ   +G  ++
Sbjct: 896 QTLKHLWLIQNQITAKGTAQL 916



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE+  +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGVSTEGGKSLARALQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEM 142
           K + + +NQ   +G  ++
Sbjct: 899 KHLWLIQNQITAKGTAQL 916



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 2/150 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           LA   K  K++  V M  N +   G  A ++A   +  L  L+L  N ++ +G   L +A
Sbjct: 804 LALAVKNSKSISDVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGVSTEGGKSLARA 863

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L +  SL IL L    L    A S+A+ L  N TL+ + L  N+I+ +G   L  A++N 
Sbjct: 864 LQQNTSLEILWLTQNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQNN 923

Query: 122 TKLKQINVSENQFGEE--GVEEMEKLMKSF 149
           T + +I ++ N    E   V E EK +  F
Sbjct: 924 TGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFS---RLTVIRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     +R   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELRPCFSRLTVIR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   +  + +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKCLALAVKNSKSISDVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|399498036|emb|CCG20346.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGIVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +L +  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMTGNDITAEAASAIASCIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NTLRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG+ L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+L +  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASCIAAKQLLAKLSLSENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  ++ L +V+++ N +   G   L + + +K + K +NV+ N   EEGV+E+++
Sbjct: 430 QIAKALEGHSHLIEVDMSSNTLRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG+ L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|149508354|ref|XP_001507977.1| PREDICTED: T-complex-associated testis-expressed protein 1-like
           [Ornithorhynchus anatinus]
          Length = 455

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 1/164 (0%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N + + GA+ +A +    + L  + +  N +   G  AL+ A   N  L  LNL  N I 
Sbjct: 281 NLIGDRGARAVAKLLNHSR-LRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIE 339

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +G   L  AL    +L +L+LG   L    A+ +++ L+ NTTL  VNL+CN I   GG
Sbjct: 340 DEGGQALAHALQTNDTLVVLHLGSNELSEPTATLLSQVLSVNTTLASVNLSCNHIGPDGG 399

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
             L++ M +   + + ++   + G+E    M + +K+   AA L
Sbjct: 400 KQLLEGMADNRTVVEFDLRLAEVGQESEYLMGQALKANQEAARL 443



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 68/136 (50%)

Query: 20  NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
           N +   G  AL+ A   N  L  LNL  N I  +G   L  AL    +L +L+LG   L 
Sbjct: 308 NRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALAHALQTNDTLVVLHLGSNELS 367

Query: 80  SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
              A+ +++ L+ NTTL  VNL+CN I   GG  L++ M +   + + ++   + G+E  
Sbjct: 368 EPTATLLSQVLSVNTTLASVNLSCNHIGPDGGKQLLEGMADNRTVVEFDLRLAEVGQESE 427

Query: 140 EEMEKLMKSFGMAAAL 155
             M + +K+   AA L
Sbjct: 428 YLMGQALKANQEAARL 443



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 1/125 (0%)

Query: 335 HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 394
           H    +L+ A +  + L+ L L  + +T + A  L   L   P+L  L+L   L+   GA
Sbjct: 229 HRDCRSLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRGA 288

Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
            ++AK L +++ L  +NL+ N +   G   L +A+ + T L  +N+  N+  +EG + + 
Sbjct: 289 RAVAKLL-NHSRLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALA 347

Query: 455 KLMKS 459
             +++
Sbjct: 348 HALQT 352



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 1/125 (0%)

Query: 24  HVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 83
           H    +L+ A +  + L+ L L  + +T + A  L   L   P+L  L+L   L+   GA
Sbjct: 229 HRDCRSLAGALKACRTLKVLKLTRSRVTDEKARILVHGLLDHPALQELDLSHNLIGDRGA 288

Query: 84  SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
            ++AK L +++ L  +NL+ N +   G   L +A+ + T L  +N+  N+  +EG + + 
Sbjct: 289 RAVAKLL-NHSRLRALNLSNNRVRAPGAQALARALAHNTTLTSLNLRLNRIEDEGGQALA 347

Query: 144 KLMKS 148
             +++
Sbjct: 348 HALQT 352


>gi|320165118|gb|EFW42017.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 263

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 76/157 (48%)

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           R  +  +  + +A   K   +L  +++ +N I   G  A+++A + N  L  L L  N I
Sbjct: 23  RQNIREDDVQAIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLGQNQI 82

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + + L     LA L+L    +  AGA +IA+ L  NTTL ++   CN +   G
Sbjct: 83  GDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPG 142

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
              + +A K  T +  + +SEN  G+ G + + + +K
Sbjct: 143 AKAIAEAFKVNTTMTGLGLSENAIGDAGAQAVAEALK 179



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   +L  +++ +N I   G  A+++A + N  L  L L  N I   GA  + + 
Sbjct: 34  IAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLGQNQIGDAGAHAIAET 93

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     LA L+L    +  AGA +IA+ L  NTTL ++   CN +   G   + +A K  
Sbjct: 94  LKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEAFKVN 153

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T +  + +SEN  G+ G + + + +K
Sbjct: 154 TTMTGLGLSENAIGDAGAQAVAEALK 179



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 77/156 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N++ + GA+ +A   K   TL  + + QN I   G  A+++  + N  L  L+L  N I 
Sbjct: 52  NQIGDAGAQAIAEALKLNTTLTELGLGQNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIG 111

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
             GA  + +AL    +L  L  G   +   GA +IA+    NTT+  + L+ N I   G 
Sbjct: 112 DAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEAFKVNTTMTGLGLSENAIGDAGA 171

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
             + +A+K  T L  + + +NQ G+ G   + +++K
Sbjct: 172 QAVAEALKVNTALNWLFLHQNQIGDAGARAIAEVLK 207



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 70/134 (52%)

Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
           ++E+ +  I    + A+++A + N +LR L+L +N I   GA  + +AL    +L  L L
Sbjct: 18  KLELIRQNIREDDVQAIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGL 77

Query: 385 GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 444
           G   +  AGA +IA+ L  NT L  ++L  N+I   G   + +A++  T L ++    N 
Sbjct: 78  GQNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNH 137

Query: 445 FGEEGVEEMEKLMK 458
            G+ G + + +  K
Sbjct: 138 VGDPGAKAIAEAFK 151



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           +E+ +  I    + A+++A + N  LR L+L +N I   GA  + +AL    +L  L LG
Sbjct: 19  LELIRQNIREDDVQAIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLG 78

Query: 75  DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
              +  AGA +IA+ L  NT L  ++L  N+I   G   + +A++  T L ++    N  
Sbjct: 79  QNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHV 138

Query: 135 GEEGVEEMEKLMK 147
           G+ G + + +  K
Sbjct: 139 GDPGAKAIAEAFK 151



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   TL  + + QN I   G  A+++  + N  L  L+L  N I   GA  + +A
Sbjct: 62  IAEALKLNTTLTELGLGQNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEA 121

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L  L  G   +   GA +IA+    NTT+  + L+ N I   G   + +A+K  
Sbjct: 122 LRVNTTLTELGFGCNHVGDPGAKAIAEAFKVNTTMTGLGLSENAIGDAGAQAVAEALKVN 181

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
           T L  + + +NQ G+ G   + +++K
Sbjct: 182 TALNWLFLHQNQIGDAGARAIAEVLK 207



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 12/214 (5%)

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAG 301
           V+ +A+ L+++   +L  L L  N +G  G + +++AL     ++  E   L L     G
Sbjct: 31  VQAIAEALKANT--SLRALDLRENQIGDAGAQAIAEALK--LNTTLTE---LGL-----G 78

Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
           +N++ + GA  +A   K    L ++ + +N I   G  A+++A   N  L  L    N +
Sbjct: 79  QNQIGDAGAHAIAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHV 138

Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
              GA  + +A     ++  L L +  +  AGA ++A+ L  NT L  + L  N+I   G
Sbjct: 139 GDPGAKAIAEAFKVNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLFLHQNQIGDAG 198

Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
              + + +K   KL+ + +S N     G+  + +
Sbjct: 199 ARAIAEVLKVNKKLRYLYLSNNFITNVGITALRQ 232



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 61/258 (23%)

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           +IA+ L  NT+L  ++L  N+I   G   + +A+K  T L ++ + +NQ G+ G   + +
Sbjct: 33  AIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLGQNQIGDAGAHAIAE 92

Query: 145 LMKSFGMAAALVLEDDE-GECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQS 203
            +KS  M A L L  ++ G+   +   E                                
Sbjct: 93  TLKSNTMLAKLSLRRNQIGDAGAQAIAE-------------------------------- 120

Query: 204 HNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLN 263
                           +L+    L EL    N  G  G + +A+  + +    +  L L+
Sbjct: 121 ----------------ALRVNTTLTELGFGCNHVGDPGAKAIAEAFKVNTT--MTGLGLS 162

Query: 264 NNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
            N +G  G + +++AL              AL      +N++ + GA+ +A V K  K L
Sbjct: 163 ENAIGDAGAQAVAEALK----------VNTALNWLFLHQNQIGDAGARAIAEVLKVNKKL 212

Query: 324 ERVEMPQNGIYHVGITAL 341
             + +  N I +VGITAL
Sbjct: 213 RYLYLSNNFITNVGITAL 230



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 63/143 (44%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K    L  + + +N I   G  A+++A   N  L  L    N +   GA  + +A
Sbjct: 90  IAETLKSNTMLAKLSLRRNQIGDAGAQAIAEALRVNTTLTELGFGCNHVGDPGAKAIAEA 149

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
                ++  L L +  +  AGA ++A+ L  NT L  + L  N+I   G   + + +K  
Sbjct: 150 FKVNTTMTGLGLSENAIGDAGAQAVAEALKVNTALNWLFLHQNQIGDAGARAIAEVLKVN 209

Query: 122 TKLKQINVSENQFGEEGVEEMEK 144
            KL+ + +S N     G+  + +
Sbjct: 210 KKLRYLYLSNNFITNVGITALRQ 232



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%)

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           +IA+ L  NT+L  ++L  N+I   G   + +A+K  T L ++ + +NQ G+ G   + +
Sbjct: 33  AIAEALKANTSLRALDLRENQIGDAGAQAIAEALKLNTTLTELGLGQNQIGDAGAHAIAE 92

Query: 456 LMKSFGMAAALVLEDDE 472
            +KS  M A L L  ++
Sbjct: 93  TLKSNTMLAKLSLRRNQ 109


>gi|345793909|ref|XP_544394.3| PREDICTED: LOW QUALITY PROTEIN: protein NLRC5 [Canis lupus
            familiaris]
          Length = 1837

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 171/443 (38%), Gaps = 55/443 (12%)

Query: 35   EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 94
            +EN +   L L    +    ++  GQ +     L  L+L    L  + +  +   L   +
Sbjct: 1406 QENPEAVTLRLAHCDLETHHSLLAGQLMETCARLQQLSLSQVNLCDSSSLLLKNLLVSLS 1465

Query: 95   TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 154
             L+   LT + +S +G   L   ++N   L+++++S NQFGEE  E +  ++        
Sbjct: 1466 ELKTFRLTSSCMSSKGLAHLTFGLRNCHHLEELDLSNNQFGEEDTEVLMTVL-------- 1517

Query: 155  LVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQS------HNNS- 207
                  EG+C  ++ D        S        LSH     S   S         H  S 
Sbjct: 1518 ------EGKCWLKKLDLSHLPLGSSTLAMFTQGLSHMTLLQSLRLSRNGICDVGCHQLSE 1571

Query: 208  ---------------NQSHNTSNQSHMSLKTG-ARLVELDLSDNAFGPIGVEGLADLLRS 251
                           NQ  +T  Q   ++  G   L ++DLS N  GP G   LA+ L  
Sbjct: 1572 ALRAAMSLKELGLSHNQIRDTGAQHLAAVLPGLPELRKIDLSGNGIGPAGGTRLAESL-- 1629

Query: 252  SCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 311
            + C  LEEL L  N LG T    L++ L            P  L+V     +RL  +GA 
Sbjct: 1630 TLCRHLEELMLGYNVLGDTTALGLAQGL------------PCCLRVLHLPSSRLGPKGAL 1677

Query: 312  MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
             L+        +E + + +N +   G+            LR ++L    I    A PL  
Sbjct: 1678 SLSQALDGCPHVEEISLAENSLAR-GVLHFCQGLPL---LRQIDLVSCEIDNHTAKPLAA 1733

Query: 372  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
            +L   P+L  + L   LL    A+ +A+ L     L+ ++L  N I+  G   L + +  
Sbjct: 1734 SLVLCPALEEILLSWNLLGDEAAAELARVLPQMGRLKRMDLEKNRITACGAWLLAEGLAQ 1793

Query: 432  KTKLKQINVSENQFGEEGVEEME 454
             + ++ I +  N      V+ ++
Sbjct: 1794 GSGIQVIRLWNNPISPTMVQHLQ 1816



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 108/494 (21%), Positives = 194/494 (39%), Gaps = 58/494 (11%)

Query: 2    LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
            L  +  K + L  +++  N +   G+  L +   +      L+L+ N+I+ + A+ L + 
Sbjct: 1210 LCWLLSKCEDLNQLDLSANMLGDDGLRCLLECLPQLPISGSLDLSHNSISLESALGLVKT 1269

Query: 62   LSKLPSL--AILNLGD----------------------CLLKSAGASSIAKYLTDNTTLE 97
            L   P +  A +NLG                       C L       +A +L     L 
Sbjct: 1270 LPSCPHIREASVNLGSEQSFWIYFSRKEEAGKTLRLSQCNLMPEHVPRLATHLNQALKLT 1329

Query: 98   DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL--MKSFGMAAAL 155
             + LT   + ++  + L+  ++    L  + V E   G+ GV  + ++    S  +    
Sbjct: 1330 ALTLTQCGLGLEQLIVLLSLLRCPVDLFTLRVEEPWVGKAGVLALLRVCTQTSGNITEIS 1389

Query: 156  VLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHND--SNHSHNASNQSHNNSNQSHNT 213
            + E  +  C    Q E   +EN    E     L+H D  ++HS  A       +     +
Sbjct: 1390 ISETQQQLCL---QLEFPPQEN---PEAVTLRLAHCDLETHHSLLAGQLMETCARLQQLS 1443

Query: 214  SNQSHM----------SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLN 263
             +Q ++           L + + L    L+ +     G+  L   LR+  C  LEEL L+
Sbjct: 1444 LSQVNLCDSSSLLLKNLLVSLSELKTFRLTSSCMSSKGLAHLTFGLRN--CHHLEELDLS 1501

Query: 264  NNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTL 323
            NN  G    ++L   L       K + S L L     G + L      M       +  L
Sbjct: 1502 NNQFGEEDTEVLMTVLEGKCWLKKLDLSHLPL-----GSSTL-----AMFTQGLSHMTLL 1551

Query: 324  ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN 383
            + + + +NGI  VG   LS+A     +L+ L L+ N I   GA  L   L  LP L  ++
Sbjct: 1552 QSLRLSRNGICDVGCHQLSEALRAAMSLKELGLSHNQIRDTGAQHLAAVLPGLPELRKID 1611

Query: 384  LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
            L    +  AG + +A+ LT    LE++ L  N +     L L + +     L+ +++  +
Sbjct: 1612 LSGNGIGPAGGTRLAESLTLCRHLEELMLGYNVLGDTTALGLAQGL--PCCLRVLHLPSS 1669

Query: 444  QFGEEGVEEMEKLM 457
            + G +G   + + +
Sbjct: 1670 RLGPKGALSLSQAL 1683



 Score = 47.4 bits (111), Expect = 0.018,   Method: Composition-based stats.
 Identities = 80/366 (21%), Positives = 148/366 (40%), Gaps = 17/366 (4%)

Query: 32   DAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 91
            +A    K++ +L+          A  L ++L  + SL  L L  C + + G S + + L 
Sbjct: 687  EALAGCKQIENLSFKSRKCGDAFAEALSKSLPTMESLKKLGLAGCKITARGISHLMQALR 746

Query: 92   DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
                LE+++   N++  +  L++V+ + +  +L+++++S +      +  + K+  +   
Sbjct: 747  LCPQLEEISFQDNQLKDRAVLNIVEVLPSLPRLQKLDLSRSNVSVSTLLCLTKVAVTCPT 806

Query: 152  AAAL-VLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQS 210
               L V E D         +  +E     D +G   N        S + + +        
Sbjct: 807  VKMLQVRETDLIFLLSPPTETAAELGAAPDLQG---NAIQRKEAQSRSLALRLLQCQLGI 863

Query: 211  HNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGIT 270
            H+   +    L+ G RL E++LS N     G   +A+   +S       L L+NNGL + 
Sbjct: 864  HDV-QELIAQLREGPRLEEVNLSGNQLDDEGCRLMAE--AASQLHITRNLDLSNNGLSVD 920

Query: 271  GCKLLSKALHDCYESSKKEGSPL-ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
                +  A++ C   ++   S L    VF     + E EG     A+   L      E+P
Sbjct: 921  RVHCMLSAVNTCQNLAELHISLLHKTVVFTFAPEQEEQEGIWKRTALRDSLTHQVPFELP 980

Query: 330  QNG----IYHVGITA-----LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLA 380
                   + H G+ A     L  A   + +  HL+L+ N +  +G   L Q L  L +L 
Sbjct: 981  LRSTRIRLTHCGLQAKHLEQLCRALGGSCHHSHLDLSGNALGDEGVAQLAQLLPGLGALQ 1040

Query: 381  ILNLGD 386
             LNL +
Sbjct: 1041 SLNLSE 1046


>gi|428181132|gb|EKX49997.1| hypothetical protein GUITHDRAFT_67409 [Guillardia theta CCMP2712]
          Length = 335

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 42/255 (16%)

Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
           +L L  +  G  GV+ LA+ L   C   L EL+L++NG+G  G   +   LH        
Sbjct: 26  KLYLGQDGLGDEGVQALAEFLSKDC--KLNELRLHDNGIGSRGASSICSVLHLNQ----- 78

Query: 289 EGSPLALKVFIAGRNR----------------------------LENEGAKMLAAVFKKL 320
                +++V + G NR                            L +EG K+LA    + 
Sbjct: 79  -----SMRVLVLGHNRIGELGAAAAGLLLRFNSSLTDLDLSGNELRDEGVKLLADCLPQN 133

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPS 378
           KTL  + + +N     G  A +DA      +L  +NL  N +  +GA  L   L SK   
Sbjct: 134 KTLRNLHLARNQFGPKGAKAFADALTAGGSSLFRVNLGSNKLRAEGAKHLSSMLLSKNLE 193

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           ++ L+L    +   GA+S+A  + +N TL  + L  N I   G   L +A++    L ++
Sbjct: 194 ISHLHLAAADIGDEGATSLADAMKENRTLCALYLQSNGIMDAGAQQLAEALRVNCTLSEL 253

Query: 439 NVSENQFGEEGVEEM 453
           +V  N    +GV  +
Sbjct: 254 HVDGNSISSKGVSAL 268



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 10/151 (6%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L L+ N FGP G +  AD L +    +L  + L +N L   G K LS  L     S 
Sbjct: 136 LRNLHLARNQFGPKGAKAFADALTAGGS-SLFRVNLGSNKLRAEGAKHLSSML----LSK 190

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
             E S L L     G     +EGA  LA   K+ +TL  + +  NGI   G   L++A  
Sbjct: 191 NLEISHLHLAAADIG-----DEGATSLADAMKENRTLCALYLQSNGIMDAGAQQLAEALR 245

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
            N  L  L+++ N+I+ KG   L  A + +P
Sbjct: 246 VNCTLSELHVDGNSISSKGVSALALASASMP 276



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 72/139 (51%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           +  + + Q+G+   G+ AL++   ++ KL  L L+DN I  +GA  +   L    S+ +L
Sbjct: 24  IRKLYLGQDGLGDEGVQALAEFLSKDCKLNELRLHDNGIGSRGASSICSVLHLNQSMRVL 83

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            LG   +   GA++    L  N++L D++L+ NE+  +G   L   +     L+ ++++ 
Sbjct: 84  VLGHNRIGELGAAAAGLLLRFNSSLTDLDLSGNELRDEGVKLLADCLPQNKTLRNLHLAR 143

Query: 132 NQFGEEGVEEMEKLMKSFG 150
           NQFG +G +     + + G
Sbjct: 144 NQFGPKGAKAFADALTAGG 162



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 72/139 (51%)

Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
           + ++ + Q+G+   G+ AL++   ++  L  L L+DN I  +GA  +   L    S+ +L
Sbjct: 24  IRKLYLGQDGLGDEGVQALAEFLSKDCKLNELRLHDNGIGSRGASSICSVLHLNQSMRVL 83

Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
            LG   +   GA++    L  N++L D++L+ NE+  +G   L   +     L+ ++++ 
Sbjct: 84  VLGHNRIGELGAAAAGLLLRFNSSLTDLDLSGNELRDEGVKLLADCLPQNKTLRNLHLAR 143

Query: 443 NQFGEEGVEEMEKLMKSFG 461
           NQFG +G +     + + G
Sbjct: 144 NQFGPKGAKAFADALTAGG 162



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 84/174 (48%), Gaps = 14/174 (8%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L +LDLS N     GV+ LAD L  +    L  L L  N  G  G K  + AL       
Sbjct: 108 LTDLDLSGNELRDEGVKLLADCLPQN--KTLRNLHLARNQFGPKGAKAFADAL------- 158

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE--RVEMPQNGIYHVGITALSDA 344
              GS L  +V + G N+L  EGAK L+++    K LE   + +    I   G T+L+DA
Sbjct: 159 TAGGSSL-FRVNL-GSNKLRAEGAKHLSSMLLS-KNLEISHLHLAAADIGDEGATSLADA 215

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            +EN+ L  L L  N I   GA  L +AL    +L+ L++    + S G S++A
Sbjct: 216 MKENRTLCALYLQSNGIMDAGAQQLAEALRVNCTLSELHVDGNSISSKGVSALA 269



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 2/139 (1%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK-LPSLA 69
           +L  +++  N +   G+  L+D   +NK LR+L+L  N    KGA     AL+    SL 
Sbjct: 107 SLTDLDLSGNELRDEGVKLLADCLPQNKTLRNLHLARNQFGPKGAKAFADALTAGGSSLF 166

Query: 70  ILNLGDCLLKSAGASSIAKY-LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
            +NLG   L++ GA  ++   L+ N  +  ++L   +I  +G   L  AMK    L  + 
Sbjct: 167 RVNLGSNKLRAEGAKHLSSMLLSKNLEISHLHLAAADIGDEGATSLADAMKENRTLCALY 226

Query: 129 VSENQFGEEGVEEMEKLMK 147
           +  N   + G +++ + ++
Sbjct: 227 LQSNGIMDAGAQQLAEALR 245



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
           K+++ G++ L +EG + LA    K   L  + +  NGI   G +++      N+++R L 
Sbjct: 26  KLYL-GQDGLGDEGVQALAEFLSKDCKLNELRLHDNGIGSRGASSICSVLHLNQSMRVLV 84

Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
           L  N I   GA   G  L    SL  L+L    L+  G   +A  L  N TL +++L  N
Sbjct: 85  LGHNRIGELGAAAAGLLLRFNSSLTDLDLSGNELRDEGVKLLADCLPQNKTLRNLHLARN 144

Query: 416 EISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +   +G      A+    + L ++N+  N+   EG + +  ++ S
Sbjct: 145 QFGPKGAKAFADALTAGGSSLFRVNLGSNKLRAEGAKHLSSMLLS 189


>gi|399497852|emb|CCG20254.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 57/286 (19%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALH------------DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT 322
             K LH               E  K+  SPL L+ F     R+ +EG  +L         
Sbjct: 271 KLKVLHFHNNMTGDGGAVAIAEIVKR--SPL-LEDFRCSSTRVGSEGGSVLCEALGMCSH 327

Query: 323 LERVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLA 380
           L+++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA
Sbjct: 328 LKKLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAMANALKDSAPSLA 386

Query: 381 IL----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
           +L                            +LG+  LK  GA  IAK L  ++ L +V++
Sbjct: 387 VLEMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDM 446

Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           + N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 447 SSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDGGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDGGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 66/145 (45%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           LE + +  +GI      A+S+     +KL+ L+ ++N     GA+ + + + + P L   
Sbjct: 244 LEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDGGAVAIAEIVKRSPLLEDF 303

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
                 + S G S + + L   + L+ ++L  N    + GL L KA+ N   L +I +S 
Sbjct: 304 RCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSNHENLTEIYLSY 363

Query: 132 NQFGEEGVEEMEKLMKSFGMAAALV 156
               +EG   M   +K    + A++
Sbjct: 364 LNLEDEGAIAMANALKDSAPSLAVL 388


>gi|348533412|ref|XP_003454199.1| PREDICTED: hypothetical protein LOC100696210 [Oreochromis
           niloticus]
          Length = 623

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 10/185 (5%)

Query: 259 ELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 318
           ++ L+NN L + G K ++  L        KE S L + + ++G N   +   + L     
Sbjct: 139 QVDLSNNNLEVYGAKAIAGML--------KENSTL-VSLILSG-NHFTDRSIEHLCPALI 188

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
               L+ +++  N +       L DA  EN  LR LNL  N I  KGA+ L   L +   
Sbjct: 189 TNTKLQHLDLSYNALGERAGEHLGDALSENTGLRSLNLAWNGIRQKGAVMLANGLGENVF 248

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L IL+L        GAS++ + L +N  LE++N++ N I  +G + L   +K    +K +
Sbjct: 249 LRILDLSFNGFGKEGASALGQALKENNVLEELNISNNRIPPEGAIHLAMGLKVNKTIKSL 308

Query: 439 NVSEN 443
           N+  N
Sbjct: 309 NIGRN 313



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 62/121 (51%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+H+++  N +       L DA  EN  LR LNL  N I  KGA+ L   L +   L IL
Sbjct: 193 LQHLDLSYNALGERAGEHLGDALSENTGLRSLNLAWNGIRQKGAVMLANGLGENVFLRIL 252

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +L        GAS++ + L +N  LE++N++ N I  +G + L   +K    +K +N+  
Sbjct: 253 DLSFNGFGKEGASALGQALKENNVLEELNISNNRIPPEGAIHLAMGLKVNKTIKSLNIGR 312

Query: 132 N 132
           N
Sbjct: 313 N 313



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 73/147 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N LE  GAK +A + K+  TL  + +  N      I  L  A   N  L+HL+L+ N + 
Sbjct: 145 NNLEVYGAKAIAGMLKENSTLVSLILSGNHFTDRSIEHLCPALITNTKLQHLDLSYNALG 204

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
            +    LG ALS+   L  LNL    ++  GA  +A  L +N  L  ++L+ N    +G 
Sbjct: 205 ERAGEHLGDALSENTGLRSLNLAWNGIRQKGAVMLANGLGENVFLRILDLSFNGFGKEGA 264

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEG 449
             L +A+K    L+++N+S N+   EG
Sbjct: 265 SALGQALKENNVLEELNISNNRIPPEG 291



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+  TL  + +  N      I  L  A   N KL+HL+L+ N +  +    LG A
Sbjct: 155 IAGMLKENSTLVSLILSGNHFTDRSIEHLCPALITNTKLQHLDLSYNALGERAGEHLGDA 214

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           LS+   L  LNL    ++  GA  +A  L +N  L  ++L+ N    +G   L +A+K  
Sbjct: 215 LSENTGLRSLNLAWNGIRQKGAVMLANGLGENVFLRILDLSFNGFGKEGASALGQALKEN 274

Query: 122 TKLKQINVSENQFGEEG 138
             L+++N+S N+   EG
Sbjct: 275 NVLEELNISNNRIPPEG 291



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 12/184 (6%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           LK  + LV L LS N F    +E L   L ++    L+ L L+ N LG    + L  AL 
Sbjct: 159 LKENSTLVSLILSGNHFTDRSIEHLCPALITNT--KLQHLDLSYNALGERAGEHLGDAL- 215

Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
                S+  G    L+      N +  +GA MLA    +   L  +++  NG    G +A
Sbjct: 216 -----SENTG----LRSLNLAWNGIRQKGAVMLANGLGENVFLRILDLSFNGFGKEGASA 266

Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
           L  A +EN  L  LN+++N I  +GAI L   L    ++  LN+G   + +AG   I K 
Sbjct: 267 LGQALKENNVLEELNISNNRIPPEGAIHLAMGLKVNKTIKSLNIGRNPILNAGCYGILKS 326

Query: 401 LTDN 404
             DN
Sbjct: 327 AQDN 330



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L  + +  NGI   G   L++   EN  LR L+L+ N    +GA  LGQAL +   L  L
Sbjct: 221 LRSLNLAWNGIRQKGAVMLANGLGENVFLRILDLSFNGFGKEGASALGQALKENNVLEEL 280

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK--TKLKQINV 129
           N+ +  +   GA  +A  L  N T++ +N+  N I   G   ++K+ ++   + L+ ++ 
Sbjct: 281 NISNNRIPPEGAIHLAMGLKVNKTIKSLNIGRNPILNAGCYGILKSAQDNPDSALETLDF 340

Query: 130 SENQF 134
           S+  F
Sbjct: 341 SDITF 345



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 60/134 (44%)

Query: 14  HVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 73
            V++  N +   G  A++   +EN  L  L L+ N  T +    L  AL     L  L+L
Sbjct: 139 QVDLSNNNLEVYGAKAIAGMLKENSTLVSLILSGNHFTDRSIEHLCPALITNTKLQHLDL 198

Query: 74  GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 133
               L       +   L++NT L  +NL  N I  +G + L   +     L+ +++S N 
Sbjct: 199 SYNALGERAGEHLGDALSENTGLRSLNLAWNGIRQKGAVMLANGLGENVFLRILDLSFNG 258

Query: 134 FGEEGVEEMEKLMK 147
           FG+EG   + + +K
Sbjct: 259 FGKEGASALGQALK 272


>gi|320166233|gb|EFW43132.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 419

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 89/166 (53%)

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
           +E AK +A   K  K ++R+ + +N I   G  A+++A + N  + HL L  N I   GA
Sbjct: 13  DEEAKAIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRNQIGNAGA 72

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + +AL    +L+  +L    +   GA +IA+ L  NT L +++L+ N+I   G   + 
Sbjct: 73  QAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQTIA 132

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
           +A+K    L  +++ +NQ G+EG   + + ++   + ++L L +++
Sbjct: 133 EALKVNKTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQ 178



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 70/119 (58%)

Query: 29  ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
           A+++A + NK ++ L L +N I   GA  + +AL    ++  L L    + +AGA +IA+
Sbjct: 18  AIAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRNQIGNAGAQAIAE 77

Query: 89  YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            L  NTTL + +L  N+I   G   + +A+K  TKL ++++S+NQ G+ G + + + +K
Sbjct: 78  ALKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQTIAEALK 136



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 79/153 (51%)

Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
           A+K  +   NR+ + GA+ +A   K   T+  + + +N I + G  A+++A + N  L  
Sbjct: 28  AVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRNQIGNAGAQAIAEALKVNTTLSE 87

Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
            +L  N I   GA  + +AL     L  L+L    +  AGA +IA+ L  N TL  ++L 
Sbjct: 88  FDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQTIAEALKVNKTLTTLSLH 147

Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
            N+I  +G   + +A+++   L  + ++ENQ G
Sbjct: 148 KNQIGDEGARAIAEALQDNKILSSLYLNENQIG 180



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 84/160 (52%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K  K ++ + + +N I   G  A+++A + N  + HL L  N I   GA  + +A
Sbjct: 19  IAEALKVNKAVKRLLLWENRIGDAGAQAIAEALKVNTTMTHLYLQRNQIGNAGAQAIAEA 78

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L    +L+  +L    +   GA +IA+ L  NT L +++L+ N+I   G   + +A+K  
Sbjct: 79  LKVNTTLSEFDLWGNQIGDVGAQAIAEALKVNTKLIELSLSQNQIGDAGAQTIAEALKVN 138

Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 161
             L  +++ +NQ G+EG   + + ++   + ++L L +++
Sbjct: 139 KTLTTLSLHKNQIGDEGARAIAEALQDNKILSSLYLNENQ 178



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K   T+ H+ + +N I + G  A+++A + N  L   +L  N I   GA  + +A
Sbjct: 47  IAEALKVNTTMTHLYLQRNQIGNAGAQAIAEALKVNTTLSEFDLWGNQIGDVGAQAIAEA 106

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L     L  L+L    +  AGA +IA+ L  N TL  ++L  N+I  +G   + +A+++ 
Sbjct: 107 LKVNTKLIELSLSQNQIGDAGAQTIAEALKVNKTLTTLSLHKNQIGDEGARAIAEALQDN 166

Query: 122 TKLKQINVSENQFG 135
             L  + ++ENQ G
Sbjct: 167 KILSSLYLNENQIG 180



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 12/153 (7%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    +  L L  N  G  G + +A+ L+ +    L E  L  N +G  G + +++AL
Sbjct: 50  ALKVNTTMTHLYLQRNQIGNAGAQAIAEALKVNTT--LSEFDLWGNQIGDVGAQAIAEAL 107

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                  K     + L +    +N++ + GA+ +A   K  KTL  + + +N I   G  
Sbjct: 108 -------KVNTKLIELSL---SQNQIGDAGAQTIAEALKVNKTLTTLSLHKNQIGDEGAR 157

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           A+++A ++NK L  L LN+N I Y   I L ++
Sbjct: 158 AIAEALQDNKILSSLYLNENQIGYYVEIALRRS 190


>gi|399498024|emb|CCG20340.1| Ran GTPase activating protein 2 [Solanum stenotomum]
          Length = 553

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEAPGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|399498006|emb|CCG20331.1| Ran GTPase activating protein 2 [Solanum spegazzinii]
 gi|399498116|emb|CCG20386.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV      L+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKFLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEAPGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A   ++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSNHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMAGNDITAEAASAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+LG+  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLGENELKDEGAIQIAKALEGHSHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 59/126 (46%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKFLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A    + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEAPGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|428184540|gb|EKX53395.1| hypothetical protein GUITHDRAFT_101097 [Guillardia theta CCMP2712]
          Length = 739

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 5/157 (3%)

Query: 305 LENEGAKMLAAVFKKLKTL---ERVEMPQNGIYHVGITALSDAFEENKN-LRHLNLNDNT 360
           L +EG  M+   F++L+ L   +R+E+  N I   G+  L D    +++ L+HLNL +N 
Sbjct: 40  LRDEGVVMVTHRFQELRPLHHLQRLELRSNEIRDRGMGTLCDWISTSRSPLKHLNLWNNE 99

Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
           I   GA  L + L+    L I+NLG   +K  GA+ +   L  N  L  +N++ NE++  
Sbjct: 100 IGPDGAGRLARILNA-SKLEIVNLGKNKIKDEGATQLGLALERNQRLLSLNVSDNEMTDV 158

Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
           GG     A+ N   +++I+V++N         + +++
Sbjct: 159 GGRSFTSALLNNPFVREIDVAQNNVSARTARHLREIL 195



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 5/150 (3%)

Query: 1   MLAAVFKKLKTLEHV---EMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAI 56
           M+   F++L+ L H+   E+  N I   G+  L D    ++  L+HLNL +N I   GA 
Sbjct: 47  MVTHRFQELRPLHHLQRLELRSNEIRDRGMGTLCDWISTSRSPLKHLNLWNNEIGPDGAG 106

Query: 57  PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
            L + L+    L I+NLG   +K  GA+ +   L  N  L  +N++ NE++  GG     
Sbjct: 107 RLARILNA-SKLEIVNLGKNKIKDEGATQLGLALERNQRLLSLNVSDNEMTDVGGRSFTS 165

Query: 117 AMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
           A+ N   +++I+V++N         + +++
Sbjct: 166 ALLNNPFVREIDVAQNNVSARTARHLREIL 195



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 12/148 (8%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           L  L+L  N     G+  L D + +S    L+ L L NN +G  G   L++ L+    +S
Sbjct: 61  LQRLELRSNEIRDRGMGTLCDWISTSRS-PLKHLNLWNNEIGPDGAGRLARILN----AS 115

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           K       L++   G+N++++EGA  L    ++ + L  + +  N +  VG  + + A  
Sbjct: 116 K-------LEIVNLGKNKIKDEGATQLGLALERNQRLLSLNVSDNEMTDVGGRSFTSALL 168

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALS 374
            N  +R +++  N ++ + A  L + L+
Sbjct: 169 NNPFVREIDVAQNNVSARTARHLREILA 196


>gi|78369510|ref|NP_001030396.1| ribonuclease inhibitor [Bos taurus]
 gi|74268096|gb|AAI02769.1| Ribonuclease/angiogenin inhibitor 1 [Bos taurus]
          Length = 456

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 171/420 (40%), Gaps = 66/420 (15%)

Query: 39  KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
           K++ L+L +  +T  G   L   L  LP+L  L+L D  L  AG   + + L D    LE
Sbjct: 81  KIQKLSLQNCCLTEAGCGVLPGVLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPRCRLE 140

Query: 98  DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
            + L    ++      L   ++    LK++ VS N  GE GV+ + +     G+A     
Sbjct: 141 KLQLEYCSLTAASCEPLAAVLRATRDLKELVVSNNDIGEAGVQALCR-----GLA----- 190

Query: 158 EDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQS 217
              E  C  E    E                         N    + N  +     ++Q 
Sbjct: 191 ---ESACQLETLKLE-------------------------NCGLTAANCKDLCGIVASQ- 221

Query: 218 HMSLKTGARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFALEELKLNNNGLGITGCKLLS 276
                  A L +LDL  N  G  G+  L   LL  S    L  L L    L ++GC+ L 
Sbjct: 222 -------ASLKDLDLGSNRLGDAGLAELCPGLLSPS--SQLRTLWLWECDLTVSGCRELC 272

Query: 277 KALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYH 335
           + L        KE    ALK      N L +EGA++L  ++ +    LE + +   G   
Sbjct: 273 RVLQ------AKE----ALKELSLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTA 322

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAG 393
                 S    +NK+L  L L+ N +   G   L QAL + P   L +L +GDC L ++ 
Sbjct: 323 ACCQHFSSMLTQNKHLLELQLSSNPLGDAGVHVLCQALGQ-PGTVLRVLWVGDCELTNSS 381

Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEE 452
              +A  L  + +L +++L+ N +   G L L+ +++     L+Q+ V  + +  E V+E
Sbjct: 382 CGGLASLLLASPSLRELDLSNNGLGDPGVLQLLGSLEQPACSLEQL-VLYDIYWTEAVDE 440



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 34/279 (12%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+  A L EL L  N  G  GV  +   L+S  C  +++L L N  L   GC +L   L
Sbjct: 46  ALQANASLTELSLRTNELGDGGVLLVLQGLQSPTC-KIQKLSLQNCCLTEAGCGVLPGVL 104

Query: 280 HDCYESSKKEGS--PLA---LKVFIAG----RNRLEN----------EGAKMLAAVFKKL 320
                  +   S  PL    L++   G    R RLE              + LAAV +  
Sbjct: 105 RSLPTLRELHLSDNPLGDAGLRLLCEGLLDPRCRLEKLQLEYCSLTAASCEPLAAVLRAT 164

Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
           + L+ + +  N I   G+ AL     E+   L  L L +  +T      L   ++   SL
Sbjct: 165 RDLKELVVSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCGIVASQASL 224

Query: 380 AILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
             L+LG   L  AG + +    L+ ++ L  + L   +++V G  +L + ++ K  LK++
Sbjct: 225 KDLDLGSNRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRELCRVLQAKEALKEL 284

Query: 439 NVSENQFGEEGVE-----------EMEKL-MKSFGMAAA 465
           +++ N  G+EG +           ++E L +KS G  AA
Sbjct: 285 SLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTAA 323



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 14/167 (8%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQ 60
           LAAV +  + L+ + +  N I   G+ AL     E+  +L  L L +  +T      L  
Sbjct: 157 LAAVLRATRDLKELVVSNNDIGEAGVQALCRGLAESACQLETLKLENCGLTAANCKDLCG 216

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
            ++   SL  L+LG   L  AG + +    L+ ++ L  + L   +++V G  +L + ++
Sbjct: 217 IVASQASLKDLDLGSNRLGDAGLAELCPGLLSPSSQLRTLWLWECDLTVSGCRELCRVLQ 276

Query: 120 NKTKLKQINVSENQFGEEGVE-----------EMEKL-MKSFGMAAA 154
            K  LK+++++ N  G+EG +           ++E L +KS G  AA
Sbjct: 277 AKEALKELSLAGNSLGDEGAQLLCESLLQPGCQLESLWVKSCGFTAA 323


>gi|167234401|ref|NP_001107823.1| NACHT, LRR and PYD domains-containing protein 3 [Macaca mulatta]
 gi|263504747|sp|B0FPE9.1|NALP3_MACMU RecName: Full=NACHT, LRR and PYD domains-containing protein 3
 gi|164472524|gb|ABY58962.1| NLR family pyrin domain containing 3 [Macaca mulatta]
          Length = 1035

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 126/311 (40%), Gaps = 51/311 (16%)

Query: 196  SHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSS--- 252
            SH A +    NS+ + +        L T   L ELDLSDN+ G  G+  L + L+     
Sbjct: 711  SHAACSHRLVNSHLTSSFCRGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQHPDCN 770

Query: 253  --------------CCF----------ALEELKLNNNGLGITGCKLLSKALHD------- 281
                          CCF           L EL L++N LG  G +LL   L         
Sbjct: 771  IRRLWLGRCGLSHECCFDISLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCNLKK 830

Query: 282  ------------CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEM 328
                        C + +    +  +L     G N L + G  +L    K  +  L+++ +
Sbjct: 831  LWLVSCCLTSACCQDLASVLSTSRSLTRLYVGENALGDAGVAILCEKAKNPQCNLQKLGL 890

Query: 329  PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGD 386
              +G+     +ALS     N+NL HL L  NT+  KG   L + L   P   L +L L +
Sbjct: 891  VNSGLTSACCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQVLELDN 949

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQF 445
            C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + +SE  F
Sbjct: 950  CNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYF 1009

Query: 446  GEEGVEEMEKL 456
              E    +E L
Sbjct: 1010 NYETKSALETL 1020



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP--SLA 69
            L+ + +  +G+     +ALS     N+ L HL L  NT+  KG   L + L   P   L 
Sbjct: 885  LQKLGLVNSGLTSACCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLH-PDCKLQ 943

Query: 70   ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-IN 128
            +L L +C L S     ++  LT + +L  ++L  N++   G +   + +K ++ L Q + 
Sbjct: 944  VLELDNCNLTSHCCWDLSTLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLG 1003

Query: 129  VSENQFGEEGVEEMEKL 145
            +SE  F  E    +E L
Sbjct: 1004 LSEMYFNYETKSALETL 1020


>gi|297689376|ref|XP_002822141.1| PREDICTED: NACHT, LRR and PYD domains-containing protein 14 [Pongo
            abelii]
          Length = 1149

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 152/379 (40%), Gaps = 33/379 (8%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAI 70
            LE + +   G+   G   LS A   NK+L HL L DN +   G   +  AL     +L  
Sbjct: 759  LERLSLESCGLTEAGCLDLSLAVISNKRLTHLCLADNVLGDGGIKLMSDALQHAQCTLKS 818

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINV 129
            L L  C L      +I+  L  + +L  +NL+ N +   G   L +A+++ K  L+++++
Sbjct: 819  LVLESCNLTVFCCLNISNALIRSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSL 878

Query: 130  SENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLS 189
                  E G E++   + S      L L D+                 D   +  +  L 
Sbjct: 879  ESCGLTEAGCEDLSLALISNKRLTHLCLADNVL--------------GDGGIKLMSDALQ 924

Query: 190  HNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLL 249
            H           + H  S  S   S     SL     L  LDL  N     GV+ L D+ 
Sbjct: 925  HAQCTLKSLVLRRCHFTSLSSEYLST----SLLHNKSLTHLDLGSNWLQDNGVKLLCDVF 980

Query: 250  RSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 309
            R   C        N   L + GC L +    D   +S    +P  L+    G N L+++G
Sbjct: 981  RHPSC--------NLQDLELMGCVLTNACCLD--LASVILINP-NLRSLDLGNNDLQDDG 1029

Query: 310  AKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
             K+L    +     ++R+E+   G+  +    LS A   NK L  +NL  NT+ Y+G + 
Sbjct: 1030 VKILCDALRHPNCNIQRLELEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEGIVK 1089

Query: 369  LGQALSKLPSLAILNLGDC 387
            L + L K P   +  LG C
Sbjct: 1090 LYKVL-KSPKCKLQVLGLC 1107



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 180/446 (40%), Gaps = 71/446 (15%)

Query: 37   NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTT 95
            N KL+ L L    +T    + +  AL +  SL  LNL    L   G   + + L      
Sbjct: 699  NCKLQKLLLESCNLTVFCCLNISNALIRSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCY 758

Query: 96   LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAA 154
            LE ++L    ++  G LDL  A+ +  +L  + +++N  G+ G++ M + L  +     +
Sbjct: 759  LERLSLESCGLTEAGCLDLSLAVISNKRLTHLCLADNVLGDGGIKLMSDALQHAQCTLKS 818

Query: 155  LVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTS 214
            LVLE                          + NL+     +  NA  +S +         
Sbjct: 819  LVLE--------------------------SCNLTVFCCLNISNALIRSQS--------- 843

Query: 215  NQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKL 274
                        L+ L+LS N     GV+ L + LR   C+ LE L L + GL   GC+ 
Sbjct: 844  ------------LIFLNLSTNNLLDDGVQLLCEALRHPKCY-LERLSLESCGLTEAGCED 890

Query: 275  LSKAL-------HDCYE------------SSKKEGSPLALKVFIAGRNRLENEGAKMLAA 315
            LS AL       H C              S   + +   LK  +  R    +  ++ L+ 
Sbjct: 891  LSLALISNKRLTHLCLADNVLGDGGIKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLST 950

Query: 316  VFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQALS 374
                 K+L  +++  N +   G+  L D F   + NL+ L L    +T    + L   + 
Sbjct: 951  SLLHNKSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVIL 1010

Query: 375  KLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 433
              P+L  L+LG+  L+  G   +   L   N  ++ + L    ++     DL  A+    
Sbjct: 1011 INPNLRSLDLGNNDLQDDGVKILCDALRHPNCNIQRLELEYCGLTSLCCQDLSSALICNK 1070

Query: 434  KLKQINVSENQFGEEGVEEMEKLMKS 459
            +L ++N+++N  G EG+ ++ K++KS
Sbjct: 1071 RLIKMNLTQNTLGYEGIVKLYKVLKS 1096



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 2/141 (1%)

Query: 10   KTLEHVEMPQNGIYHVGITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
            K+L H+++  N +   G+  L D F   +  L+ L L    +T    + L   +   P+L
Sbjct: 956  KSLTHLDLGSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILINPNL 1015

Query: 69   AILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
              L+LG+  L+  G   +   L   N  ++ + L    ++     DL  A+    +L ++
Sbjct: 1016 RSLDLGNNDLQDDGVKILCDALRHPNCNIQRLELEYCGLTSLCCQDLSSALICNKRLIKM 1075

Query: 128  NVSENQFGEEGVEEMEKLMKS 148
            N+++N  G EG+ ++ K++KS
Sbjct: 1076 NLTQNTLGYEGIVKLYKVLKS 1096


>gi|46447245|ref|YP_008610.1| hypothetical protein pc1611 [Candidatus Protochlamydia amoebophila
            UWE25]
 gi|46400886|emb|CAF24335.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
            UWE25]
          Length = 1594

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 83/166 (50%)

Query: 294  ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
            AL       N++ + G + LA       T++++ +  N I   G  AL+     N  L  
Sbjct: 1385 ALSFLRLNNNQISDRGVEALARALTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMT 1444

Query: 354  LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
            L+L +N I+ KG     QAL+   +L  L L    +   G  ++A+ LT NTTLE ++L 
Sbjct: 1445 LSLRENLISNKGVEAFAQALASNTALRKLYLNGNQISDKGMETLARALTPNTTLESLDLD 1504

Query: 414  CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
             N+IS +G   L  A+ + T L+ I ++ N   ++G+E + + + S
Sbjct: 1505 RNQISDRGVEALAIALVSNTALRTIYLNRNLISDKGMEALARALAS 1550



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%)

Query: 12   LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
            L  + +  N I   G+ AL+ A   N  ++ L L  N I+ +GA  L + L+   +L  L
Sbjct: 1386 LSFLRLNNNQISDRGVEALARALTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMTL 1445

Query: 72   NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
            +L + L+ + G  + A+ L  NT L  + L  N+IS +G   L +A+   T L+ +++  
Sbjct: 1446 SLRENLISNKGVEAFAQALASNTALRKLYLNGNQISDKGMETLARALTPNTTLESLDLDR 1505

Query: 132  NQFGEEGVEEM 142
            NQ  + GVE +
Sbjct: 1506 NQISDRGVEAL 1516



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            T++ + +  N I   G  AL+     N  L  L+L +N I+ KG     QAL+   +L  
Sbjct: 1413 TIKQLWLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALASNTALRK 1472

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
            L L    +   G  ++A+ LT NTTLE ++L  N+IS +G   L  A+ + T L+ I ++
Sbjct: 1473 LYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSNTALRTIYLN 1532

Query: 131  ENQFGEEGVEEMEKLMKS 148
             N   ++G+E + + + S
Sbjct: 1533 RNLISDKGMEALARALAS 1550



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 12/184 (6%)

Query: 229  ELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKK 288
            +L L  N     G E L  +L S+   AL  L L  N +   G +  ++AL         
Sbjct: 1416 QLWLESNQISDRGAEALTRVLASNT--ALMTLSLRENLISNKGVEAFAQAL--------- 1464

Query: 289  EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
              S  AL+      N++ ++G + LA       TLE +++ +N I   G+ AL+ A   N
Sbjct: 1465 -ASNTALRKLYLNGNQISDKGMETLARALTPNTTLESLDLDRNQISDRGVEALAIALVSN 1523

Query: 349  KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
              LR + LN N I+ KG   L +AL+   +L  L+L   L+   G  ++AK L  NT L+
Sbjct: 1524 TALRTIYLNRNLISDKGMEALARALASNTALTTLSLNGNLISDKGMKALAKVLASNTALK 1583

Query: 409  DVNL 412
               L
Sbjct: 1584 KFWL 1587



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 21/252 (8%)

Query: 28   TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
            T L   +  + +L  L+L+   I+ K A  +   L+   +L+ L L +  +   G  ++A
Sbjct: 1346 TQLFQLYMNDSRLTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALA 1405

Query: 88   KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
            + LT NTT++ + L  N+IS +G   L + + + T L  +++ EN    +GVE   + + 
Sbjct: 1406 RALTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALA 1465

Query: 148  SFGMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNS 207
            S      L L  +        Q  +   E  + A   N+ L   D +      NQ  +  
Sbjct: 1466 SNTALRKLYLNGN--------QISDKGMETLARALTPNTTLESLDLDR-----NQISDRG 1512

Query: 208  NQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGL 267
             ++   +  S+ +L+T      + L+ N     G+E LA  L S+   AL  L LN N +
Sbjct: 1513 VEALAIALVSNTALRT------IYLNRNLISDKGMEALARALASNT--ALTTLSLNGNLI 1564

Query: 268  GITGCKLLSKAL 279
               G K L+K L
Sbjct: 1565 SDKGMKALAKVL 1576



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%)

Query: 11   TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
            TLE +++ +N I   G+ AL+ A   N  LR + LN N I+ KG   L +AL+   +L  
Sbjct: 1497 TLESLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLISDKGMEALARALASNTALTT 1556

Query: 71   LNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
            L+L   L+   G  ++AK L  NT L+   L
Sbjct: 1557 LSLNGNLISDKGMKALAKVLASNTALKKFWL 1587



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 61/121 (50%)

Query: 339  TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
            T L   +  +  L  L+L+   I+ K A  +   L+   +L+ L L +  +   G  ++A
Sbjct: 1346 TQLFQLYMNDSRLTSLDLSYRGISDKEAEVIANGLTFNTALSFLRLNNNQISDRGVEALA 1405

Query: 399  KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
            + LT NTT++ + L  N+IS +G   L + + + T L  +++ EN    +GVE   + + 
Sbjct: 1406 RALTFNTTIKQLWLESNQISDRGAEALTRVLASNTALMTLSLRENLISNKGVEAFAQALA 1465

Query: 459  S 459
            S
Sbjct: 1466 S 1466



 Score = 45.1 bits (105), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 58/108 (53%)

Query: 348  NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
            N  L  L LN+N I+ +G   L +AL+   ++  L L    +   GA ++ + L  NT L
Sbjct: 1383 NTALSFLRLNNNQISDRGVEALARALTFNTTIKQLWLESNQISDRGAEALTRVLASNTAL 1442

Query: 408  EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
              ++L  N IS +G     +A+ + T L+++ ++ NQ  ++G+E + +
Sbjct: 1443 MTLSLRENLISNKGVEAFAQALASNTALRKLYLNGNQISDKGMETLAR 1490



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 14/155 (9%)

Query: 221  LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
            L +   L+ L L +N     GVE  A  L S+   AL +L LN N +   G + L++AL 
Sbjct: 1436 LASNTALMTLSLRENLISNKGVEAFAQALASNT--ALRKLYLNGNQISDKGMETLARAL- 1492

Query: 281  DCYESSKKEGSP-LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                      +P   L+     RN++ + G + LA        L  + + +N I   G+ 
Sbjct: 1493 ----------TPNTTLESLDLDRNQISDRGVEALAIALVSNTALRTIYLNRNLISDKGME 1542

Query: 340  ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
            AL+ A   N  L  L+LN N I+ KG   L + L+
Sbjct: 1543 ALARALASNTALTTLSLNGNLISDKGMKALAKVLA 1577


>gi|399498038|emb|CCG20347.1| Ran GTPase activating protein 2 [Solanum stoloniferum]
          Length = 553

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGIVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +L +  LK  GA  IAK L  ++ L +V+++ 
Sbjct: 389 EMTGNDITAEAASAIASRIAAKQLLAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV+E++++ K
Sbjct: 449 NTLRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVDELKEIFK 492



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 61/126 (48%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG+ L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%)

Query: 68  LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
           LA L+L +  LK  GA  IAK L  ++ L +V+++ N +   G   L + + +K + K +
Sbjct: 413 LAKLSLSENELKDEGAIQIAKALEGHSHLIEVDMSSNTLRRAGARVLAQTVLHKDEFKLL 472

Query: 128 NVSENQFGEEGVEEMEKLMK 147
           NV+ N   EEGV+E++++ K
Sbjct: 473 NVNGNFISEEGVDELKEIFK 492



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG+ L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A + K+   LE        +   G   L +A      L+ L+L DN    +  + L +A
Sbjct: 290 IAEIVKRSPLLEDFRCSSTRVGSEGGIVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKA 349

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
           LSK  +L  + L    L+  GA +IA  L D+  +L  + +T N+I+ +    +   +  
Sbjct: 350 LSKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVLEMTGNDITAEAASAIASRIAA 409

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
           K  L ++++SEN+  +EG  ++ K ++
Sbjct: 410 KQLLAKLSLSENELKDEGAIQIAKALE 436


>gi|326430053|gb|EGD75623.1| hypothetical protein PTSG_12468 [Salpingoeca sp. ATCC 50818]
          Length = 344

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 78/151 (51%)

Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
           LE  GA+++A   KK   + ++ +  N +   G  A+++A + N  L  L+L+DN +   
Sbjct: 123 LEEIGARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDNHLGPD 182

Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
           G   +  AL     L  L L +  + + G  +IAK L  NT+L  ++L+ N +   G + 
Sbjct: 183 GCAAIATALESNTMLHTLFLYNNNIGTDGVKAIAKSLLKNTSLTRLSLSRNHLGPDGAIA 242

Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           + +A+K+ T L  +++  N+ GE G   + +
Sbjct: 243 IAEALKSNTTLLNLDLGWNEIGETGAAALAR 273



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 15/208 (7%)

Query: 247 DLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLE 306
           D+  S+C    EE  L+ + L   G +++++AL       KK  + L L +   G N L 
Sbjct: 106 DMANSTCG---EECILSWHNLEEIGARVIAEAL-------KKNTNMLKLNL---GWNNLR 152

Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
             G + +A   K+  TL  + +  N +   G  A++ A E N  L  L L +N I   G 
Sbjct: 153 AAGGRAIAEALKRNNTLHELSLSDNHLGPDGCAAIATALESNTMLHTLFLYNNNIGTDGV 212

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 426
             + ++L K  SL  L+L    L   GA +IA+ L  NTTL +++L  NEI   G   L 
Sbjct: 213 KAIAKSLLKNTSLTRLSLSRNHLGPDGAIAIAEALKSNTTLLNLDLGWNEIGETGAAALA 272

Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEME 454
           +A+  +  +      +N+  EE +  +E
Sbjct: 273 RAIDPRRSITITYGGDNK--EEEITALE 298



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 72/144 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A   KK   +  + +  N +   G  A+++A + N  L  L+L+DN +   G   +  
Sbjct: 130 VIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDNHLGPDGCAAIAT 189

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL     L  L L +  + + G  +IAK L  NT+L  ++L+ N +   G + + +A+K+
Sbjct: 190 ALESNTMLHTLFLYNNNIGTDGVKAIAKSLLKNTSLTRLSLSRNHLGPDGAIAIAEALKS 249

Query: 121 KTKLKQINVSENQFGEEGVEEMEK 144
            T L  +++  N+ GE G   + +
Sbjct: 250 NTTLLNLDLGWNEIGETGAAALAR 273



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 63/124 (50%)

Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
           +G   +++A ++N N+  LNL  N +   G   + +AL +  +L  L+L D  L   G +
Sbjct: 126 IGARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDNHLGPDGCA 185

Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           +IA  L  NT L  + L  N I   G   + K++   T L ++++S N  G +G   + +
Sbjct: 186 AIATALESNTMLHTLFLYNNNIGTDGVKAIAKSLLKNTSLTRLSLSRNHLGPDGAIAIAE 245

Query: 456 LMKS 459
            +KS
Sbjct: 246 ALKS 249



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A   K+  TL  + +  N +   G  A++ A E N  L  L L +N I   G   + ++
Sbjct: 159 IAEALKRNNTLHELSLSDNHLGPDGCAAIATALESNTMLHTLFLYNNNIGTDGVKAIAKS 218

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L K  SL  L+L    L   GA +IA+ L  NTTL +++L  NEI   G   L +A+  +
Sbjct: 219 LLKNTSLTRLSLSRNHLGPDGAIAIAEALKSNTTLLNLDLGWNEIGETGAAALARAIDPR 278

Query: 122 TKLKQINVSENQFGEEGVEEME 143
             +      +N+  EE +  +E
Sbjct: 279 RSITITYGGDNK--EEEITALE 298



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 20/146 (13%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +LK    L EL LSDN  GP G   +A  L S+    L  L L NN +G  G K ++K+L
Sbjct: 162 ALKRNNTLHELSLSDNHLGPDGCAAIATALESNTM--LHTLFLYNNNIGTDGVKAIAKSL 219

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
                   K  S   L +    RN L  +GA  +A   K   TL  +++  N I   G  
Sbjct: 220 -------LKNTSLTRLSL---SRNHLGPDGAIAIAEALKSNTTLLNLDLGWNEIGETGAA 269

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKG 365
           AL+ A +  +++        TITY G
Sbjct: 270 ALARAIDPRRSI--------TITYGG 287



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 51/91 (56%)

Query: 54  GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 113
           GA  + +AL K  ++  LNLG   L++AG  +IA+ L  N TL +++L+ N +   G   
Sbjct: 127 GARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDNHLGPDGCAA 186

Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
           +  A+++ T L  + +  N  G +GV+ + K
Sbjct: 187 IATALESNTMLHTLFLYNNNIGTDGVKAIAK 217



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%)

Query: 78  LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 137
           L+  GA  IA+ L  NT +  +NL  N +   GG  + +A+K    L ++++S+N  G +
Sbjct: 123 LEEIGARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDNHLGPD 182

Query: 138 GVEEMEKLMKSFGMAAALVLEDD 160
           G   +   ++S  M   L L ++
Sbjct: 183 GCAAIATALESNTMLHTLFLYNN 205



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%)

Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
           L+  GA  IA+ L  NT +  +NL  N +   GG  + +A+K    L ++++S+N  G +
Sbjct: 123 LEEIGARVIAEALKKNTNMLKLNLGWNNLRAAGGRAIAEALKRNNTLHELSLSDNHLGPD 182

Query: 449 GVEEMEKLMKSFGMAAALVLEDD 471
           G   +   ++S  M   L L ++
Sbjct: 183 GCAAIATALESNTMLHTLFLYNN 205


>gi|410952572|ref|XP_003982953.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Felis catus]
          Length = 953

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 12/219 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  + LS N     GV+ L + L       L  L L NN +   G + +++ L +C  
Sbjct: 728 SRLTVIRLSVNQITDSGVKVLCEELTKYK--ILTFLGLYNNQITDVGARYIARILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G N++ +EG K LA   KK K++  V M  N I   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L +L+L  N I+ +G   L QAL    SL I  L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
            TL+ + L  N+I+ +G   L  A++  T + +I ++ N
Sbjct: 896 QTLKHLWLIQNQITAKGIAQLADALQRNTGIMEICLNGN 934



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  ++L+ N +  +G K+L      C E +K +     L       N++ + GA+ 
Sbjct: 726 CFSRLTVIRLSVNQITDSGVKVL------CEELTKYK----ILTFLGLYNNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +A +  + K L  +++ +N I   G   L+ A +++K++  + +  N I  +GA    +A
Sbjct: 776 IARILDECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+L    LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEM 453
             LK + + +NQ   +G+ ++
Sbjct: 896 QTLKHLWLIQNQITAKGIAQL 916



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 12/143 (8%)

Query: 219 MSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKA 278
           +++K    + E+ +  N  G  G +  A+ LR+    +L  L L  NG+   G K L++A
Sbjct: 806 LAVKKSKSIFEVGMWGNRIGDEGAKAFAEALRNHP--SLTNLSLAFNGISTEGGKSLAQA 863

Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
           L   + +S        L++F   +N L++E A+ LA + K  +TL+ + + QN I   GI
Sbjct: 864 LQ--WNTS--------LRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGI 913

Query: 339 TALSDAFEENKNLRHLNLNDNTI 361
             L+DA + N  +  + LN N I
Sbjct: 914 AQLADALQRNTGIMEICLNGNLI 936



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 72/141 (51%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           +A +  + K L H+++ +N I   G   L+ A +++K +  + +  N I  +GA    +A
Sbjct: 776 IARILDECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEA 835

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
           L   PSL  L+L    + + G  S+A+ L  NT+L    LT NE+  +    L + +K  
Sbjct: 836 LRNHPSLTNLSLAFNGISTEGGKSLAQALQWNTSLRIFWLTKNELDDEVAESLAEMLKVN 895

Query: 122 TKLKQINVSENQFGEEGVEEM 142
             LK + + +NQ   +G+ ++
Sbjct: 896 QTLKHLWLIQNQITAKGIAQL 916



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  + L+ N IT  G   L + L+K   L  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVIRLSVNQITDSGVKVLCEELTKYKILTFLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           IA+ L +   L  + L  N+I+ +GG  L  A+K    + ++ +  N+ G+EG +   + 
Sbjct: 776 IARILDECKGLTHLKLGENKITSEGGKCLALAVKKSKSIFEVGMWGNRIGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837


>gi|340505146|gb|EGR31503.1| hypothetical protein IMG5_107210 [Ichthyophthirius multifiliis]
          Length = 733

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 22/240 (9%)

Query: 213 TSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGC 272
           + NQ+  SL  G  ++E  +  N+FG  G + +A L+  +    +E +KL +N +G+ G 
Sbjct: 205 SKNQNLKSLDLG--ILEGSIRKNSFGIDGAKCIAALILQNK--NIEIIKLYDNDIGVQGG 260

Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKML--AAVFKKLKTLERVEMPQ 330
            ++  AL               LK      N L+++GA+ +  +A+F     LE +++ +
Sbjct: 261 DIIGTALK----------QNKNLKNLTISENYLKSQGAEFILKSALF-----LESLDLGK 305

Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
           N I      ++ +  + N+NL+ LNL  N ++++G     Q L    SL  +NL    + 
Sbjct: 306 NCIKSNAGISIRNYLQNNQNLKRLNLEFNELSFEGIKEFRQGLLYSQSLQYINLKGNGIG 365

Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
             G   I + L DN  LE+++++ NEIS   G+     +     LK IN+S+N  G+E +
Sbjct: 366 DEGFLMICEVLNDNYILEELDVSLNEIS-SAGIKCFADILPFCGLKNINLSKNFLGDESL 424



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 166/414 (40%), Gaps = 56/414 (13%)

Query: 8   KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
           K K ++ + +  N I   G+  +    E N +++HLNL  N I+  G   +   LSK  +
Sbjct: 151 KYKYIDTLNLADNPISDNGMHLIKQIME-NTQIKHLNLASNMISESGFEIIVDELSKNQN 209

Query: 68  LAILNLG---DCLLKSA----GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L  L+LG     + K++    GA  IA  +  N  +E + L  N+I VQGG  +  A+K 
Sbjct: 210 LKSLDLGILEGSIRKNSFGIDGAKCIAALILQNKNIEIIKLYDNDIGVQGGDIIGTALKQ 269

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED-DEGE-CSDEEQDEESEEEND 178
              LK + +SEN    +G E        F + +AL LE  D G+ C              
Sbjct: 270 NKNLKNLTISENYLKSQGAE--------FILKSALFLESLDLGKNCIK------------ 309

Query: 179 SDAEGDNSNLSHNDSNHSHNASNQSHNN---SNQSHNTSNQSHMSLKTGARLVELDLSDN 235
                  SN   +  N+  N  N    N   +  S     +    L     L  ++L  N
Sbjct: 310 -------SNAGISIRNYLQNNQNLKRLNLEFNELSFEGIKEFRQGLLYSQSLQYINLKGN 362

Query: 236 AFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLAL 295
             G  G   + ++L  +  + LEEL ++ N +   G K  +  L  C            L
Sbjct: 363 GIGDEGFLMICEVLNDN--YILEELDVSLNEISSAGIKCFADILPFC-----------GL 409

Query: 296 KVFIAGRNRLENEGAKMLAAV---FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
           K     +N L +E   ++  +   ++ +  L++++   + +   GI    D  +  +N+R
Sbjct: 410 KNINLSKNFLGDESLFIIGDICQQYENVIKLQKIDFSSSRVADAGILYFLDRIDYFENMR 469

Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
            +   DN I+ K    L + L K  +L    +    L  +  + + K L  N  
Sbjct: 470 CIKCQDNFISEKVEKVLLEILIKNKTLIEFGINGNRLSLSFLNKVKKILQRNII 523



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 5/138 (3%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGA-IPLGQ 60
           +AA+  + K +E +++  N I   G   +  A ++NK L++L +++N +  +GA   L  
Sbjct: 235 IAALILQNKNIEIIKLYDNDIGVQGGDIIGTALKQNKNLKNLTISENYLKSQGAEFILKS 294

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL     L  L+LG   +KS    SI  YL +N  L+ +NL  NE+S +G  +  + +  
Sbjct: 295 AL----FLESLDLGKNCIKSNAGISIRNYLQNNQNLKRLNLEFNELSFEGIKEFRQGLLY 350

Query: 121 KTKLKQINVSENQFGEEG 138
              L+ IN+  N  G+EG
Sbjct: 351 SQSLQYINLKGNGIGDEG 368



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 33/173 (19%)

Query: 308 EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA- 366
           +GAK +AA+  + K +E +++  N I   G   +  A ++NKNL++L +++N +  +GA 
Sbjct: 230 DGAKCIAALILQNKNIEIIKLYDNDIGVQGGDIIGTALKQNKNLKNLTISENYLKSQGAE 289

Query: 367 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG----- 421
             L  AL     L  L+LG   +KS    SI  YL +N  L+ +NL  NE+S +G     
Sbjct: 290 FILKSALF----LESLDLGKNCIKSNAGISIRNYLQNNQNLKRLNLEFNELSFEGIKEFR 345

Query: 422 -----------------------GLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
                                   L + + + +   L++++VS N+    G++
Sbjct: 346 QGLLYSQSLQYINLKGNGIGDEGFLMICEVLNDNYILEELDVSLNEISSAGIK 398


>gi|443710450|gb|ELU04703.1| hypothetical protein CAPTEDRAFT_222965 [Capitella teleta]
          Length = 516

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 77/157 (49%)

Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
           N L  EG   +  +  +  T+  + +  N I   G   +++   +N  L+ L+++ N  T
Sbjct: 161 NNLNEEGVVWIGRMMAENTTVTELNLSHNNIGSHGALVMAEVLRQNIRLKSLDISGNNFT 220

Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
              A  L + + + P+L  LNLG     S         + +N TL++++L  N+I ++G 
Sbjct: 221 DGDAKVLTKPIEEHPNLRYLNLGSNCFGSEAGVLFKDLIAENATLQELDLRWNQIRMKGA 280

Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
            +L + MK    LK +++  N F ++G + + + +K+
Sbjct: 281 QELARGMKENVSLKSLHLGWNGFSDDGAKALAEALKT 317



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 71/138 (51%)

Query: 11  TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
           T+  + +  N I   G   +++   +N +L+ L+++ N  T   A  L + + + P+L  
Sbjct: 180 TVTELNLSHNNIGSHGALVMAEVLRQNIRLKSLDISGNNFTDGDAKVLTKPIEEHPNLRY 239

Query: 71  LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
           LNLG     S         + +N TL++++L  N+I ++G  +L + MK    LK +++ 
Sbjct: 240 LNLGSNCFGSEAGVLFKDLIAENATLQELDLRWNQIRMKGAQELARGMKENVSLKSLHLG 299

Query: 131 ENQFGEEGVEEMEKLMKS 148
            N F ++G + + + +K+
Sbjct: 300 WNGFSDDGAKALAEALKT 317



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 17/223 (7%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           + EL+LS N  G  G   +A++LR +    L+ L ++ N       K+L+K +       
Sbjct: 181 VTELNLSHNNIGSHGALVMAEVLRQN--IRLKSLDISGNNFTDGDAKVLTKPI------- 231

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
             E  P  L+    G N   +E   +   +  +  TL+ +++  N I   G   L+   +
Sbjct: 232 --EEHP-NLRYLNLGSNCFGSEAGVLFKDLIAENATLQELDLRWNQIRMKGAQELARGMK 288

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
           EN +L+ L+L  N  +  GA  L +AL   P L+ L++    + S G  ++ K L  N  
Sbjct: 289 ENVSLKSLHLGWNGFSDDGAKALAEALKTCP-LSYLDISANRIGSEGFLAMIKILGQNED 347

Query: 407 LEDVNLTCN---EISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
           L+++ ++ N   E +   G+DL+ AM  +  L ++ + +  FG
Sbjct: 348 LKELKISGNPVGEAAALAGMDLLLAMP-ELHLDELEMVDISFG 389



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 1/146 (0%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A V ++   L+ +++  N         L+   EE+  LR+LNL  N    +  +    
Sbjct: 198 VMAEVLRQNIRLKSLDISGNNFTDGDAKVLTKPIEEHPNLRYLNLGSNCFGSEAGVLFKD 257

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
            +++  +L  L+L    ++  GA  +A+ + +N +L+ ++L  N  S  G   L +A+K 
Sbjct: 258 LIAENATLQELDLRWNQIRMKGAQELARGMKENVSLKSLHLGWNGFSDDGAKALAEALKT 317

Query: 121 KTKLKQINVSENQFGEEGVEEMEKLM 146
              L  +++S N+ G EG   M K++
Sbjct: 318 -CPLSYLDISANRIGSEGFLAMIKIL 342



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
           +L+H NL       KGA+ L   L     ++ LNL D  L   G   I + + +NTT+ +
Sbjct: 129 DLKHYNLGS-----KGAMALSIPLVINTRISSLNLKDNNLNEEGVVWIGRMMAENTTVTE 183

Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
           +NL+ N I   G L + + ++   +LK +++S N F
Sbjct: 184 LNLSHNNIGSHGALVMAEVLRQNIRLKSLDISGNNF 219



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 40  LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
           L+H NL       KGA+ L   L     ++ LNL D  L   G   I + + +NTT+ ++
Sbjct: 130 LKHYNLGS-----KGAMALSIPLVINTRISSLNLKDNNLNEEGVVWIGRMMAENTTVTEL 184

Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
           NL+ N I   G L + + ++   +LK +++S N F
Sbjct: 185 NLSHNNIGSHGALVMAEVLRQNIRLKSLDISGNNF 219



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 1   MLAAVF-KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLG 59
           +L++ F +KL     V++    +   G  ALS     N ++  LNL DN +  +G + +G
Sbjct: 113 LLSSRFHRKLAEDSSVDLKHYNLGSKGAMALSIPLVINTRISSLNLKDNNLNEEGVVWIG 172

Query: 60  QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
           + +++  ++  LNL    + S GA  +A+ L  N  L+ ++++ N  +      L K ++
Sbjct: 173 RMMAENTTVTELNLSHNNIGSHGALVMAEVLRQNIRLKSLDISGNNFTDGDAKVLTKPIE 232

Query: 120 NKTKLKQINVSENQFGEEG 138
               L+ +N+  N FG E 
Sbjct: 233 EHPNLRYLNLGSNCFGSEA 251



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 312 MLAAVF-KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
           +L++ F +KL     V++    +   G  ALS     N  +  LNL DN +  +G + +G
Sbjct: 113 LLSSRFHRKLAEDSSVDLKHYNLGSKGAMALSIPLVINTRISSLNLKDNNLNEEGVVWIG 172

Query: 371 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
           + +++  ++  LNL    + S GA  +A+ L  N  L+ ++++ N  +      L K ++
Sbjct: 173 RMMAENTTVTELNLSHNNIGSHGALVMAEVLRQNIRLKSLDISGNNFTDGDAKVLTKPIE 232

Query: 431 NKTKLKQINVSENQFGEEG 449
               L+ +N+  N FG E 
Sbjct: 233 EHPNLRYLNLGSNCFGSEA 251


>gi|431910520|gb|ELK13591.1| Leucine-rich repeat-containing protein 34 [Pteropus alecto]
          Length = 452

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 17/234 (7%)

Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKE 289
           LD+  N  G +G    A LL+    ++L  L L  N +G  G +L++K LH         
Sbjct: 116 LDVRYNFLGDVGAYYAAKLLQKQ--YSLIYLNLMFNDIGPEGGELIAKVLH--------- 164

Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
                LK      N++EN+G    A + +   +LE++++    +    + A +    +N+
Sbjct: 165 -KNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQ 223

Query: 350 NLRHLNLNDNTITY----KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
            ++ +NLN   I Y    +  + LG  L +   L  L++    +++ G   +   L  N 
Sbjct: 224 TIKGINLN-RPILYGEEEESTVHLGHMLKENHCLVELHMCKHDIRNYGIKHLCDALYLNK 282

Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
           +L  ++++CNEI+  G + L   +K+ T L+ I++S N+    G + + + + S
Sbjct: 283 SLRYLDVSCNEITRDGMVFLADVLKSNTTLEVIDLSFNRIENTGAKYLSETLAS 336



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
           E E    L  + K+   L  + M ++ I + GI  L DA   NK+LR+L+++ N IT  G
Sbjct: 239 EEESTVHLGHMLKENHCLVELHMCKHDIRNYGIKHLCDALYLNKSLRYLDVSCNEITRDG 298

Query: 366 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLD 424
            + L   L    +L +++L    +++ GA  +++ L + N +L+ +++  N I  +G + 
Sbjct: 299 MVFLADVLKSNTTLEVIDLSFNRIENTGAKYLSETLASHNRSLKALSVVSNNIEGEGLVA 358

Query: 425 LVKAMKNKTKLKQINVSENQFGE 447
           L +++K       I +  N+F E
Sbjct: 359 LSQSLKTNPTFSNIYIWGNKFDE 381



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 1/136 (0%)

Query: 2   LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
           L  + K+   L  + M ++ I + GI  L DA   NK LR+L+++ N IT  G + L   
Sbjct: 246 LGHMLKENHCLVELHMCKHDIRNYGIKHLCDALYLNKSLRYLDVSCNEITRDGMVFLADV 305

Query: 62  LSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           L    +L +++L    +++ GA  +++ L + N +L+ +++  N I  +G + L +++K 
Sbjct: 306 LKSNTTLEVIDLSFNRIENTGAKYLSETLASHNRSLKALSVVSNNIEGEGLVALSQSLKT 365

Query: 121 KTKLKQINVSENQFGE 136
                 I +  N+F E
Sbjct: 366 NPTFSNIYIWGNKFDE 381



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 133/331 (40%), Gaps = 57/331 (17%)

Query: 30  LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
           LS   E+N  +  L++  N +   GA    + L K  SL  LNL    +   G   IAK 
Sbjct: 103 LSRVLEKNPYINGLDVRYNFLGDVGAYYAAKLLQKQYSLIYLNLMFNDIGPEGGELIAKV 162

Query: 90  LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 149
           L  NTTL+ + +T N+I  +GG+     ++  + L+++++ +   G + V          
Sbjct: 163 LHKNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDLGDCDLGMQSV---------- 212

Query: 150 GMAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQ 209
            +A A VL  ++                    +G N               N+      +
Sbjct: 213 -IAFATVLTQNQ------------------TIKGIN--------------LNRPILYGEE 239

Query: 210 SHNTSNQSHMSLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGI 269
             +T +  HM LK    LVEL +  +     G++ L D L  +   +L  L ++ N +  
Sbjct: 240 EESTVHLGHM-LKENHCLVELHMCKHDIRNYGIKHLCDALYLNK--SLRYLDVSCNEITR 296

Query: 270 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEM 328
            G   L+  L           S   L+V     NR+EN GAK L+       ++L+ + +
Sbjct: 297 DGMVFLADVLK----------SNTTLEVIDLSFNRIENTGAKYLSETLASHNRSLKALSV 346

Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
             N I   G+ ALS + + N    ++ +  N
Sbjct: 347 VSNNIEGEGLVALSQSLKTNPTFSNIYIWGN 377



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 10/171 (5%)

Query: 282 CYESSKKEGSPLALKVFIAGRNRLEN--EGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
           C E S+K  +P  L +       +E   EG  +  A    L  +ERV      I      
Sbjct: 50  CMEKSQKI-NPFVLHILQEVDEEIEKGLEGITLNIAGNNHLIPVERVTGEDFWI------ 102

Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
            LS   E+N  +  L++  N +   GA    + L K  SL  LNL    +   G   IAK
Sbjct: 103 -LSRVLEKNPYINGLDVRYNFLGDVGAYYAAKLLQKQYSLIYLNLMFNDIGPEGGELIAK 161

Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
            L  NTTL+ + +T N+I  +GG+     ++  + L+++++ +   G + V
Sbjct: 162 VLHKNTTLKYLRMTGNKIENKGGMFFATMLQINSSLEKLDLGDCDLGMQSV 212



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 8/144 (5%)

Query: 27  ITALSDAFEENKKLRHLNLNDNTITY----KGAIPLGQALSKLPSLAILNLGDCLLKSAG 82
           + A +    +N+ ++ +NLN   I Y    +  + LG  L +   L  L++    +++ G
Sbjct: 212 VIAFATVLTQNQTIKGINLN-RPILYGEEEESTVHLGHMLKENHCLVELHMCKHDIRNYG 270

Query: 83  ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
              +   L  N +L  ++++CNEI+  G + L   +K+ T L+ I++S N+    G + +
Sbjct: 271 IKHLCDALYLNKSLRYLDVSCNEITRDGMVFLADVLKSNTTLEVIDLSFNRIENTGAKYL 330

Query: 143 EKLMKSFGM---AAALVLEDDEGE 163
            + + S      A ++V  + EGE
Sbjct: 331 SETLASHNRSLKALSVVSNNIEGE 354



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 47/99 (47%)

Query: 3   AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
           A + +K  +L ++ +  N I   G   ++    +N  L++L +  N I  KG +     L
Sbjct: 132 AKLLQKQYSLIYLNLMFNDIGPEGGELIAKVLHKNTTLKYLRMTGNKIENKGGMFFATML 191

Query: 63  SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
               SL  L+LGDC L      + A  LT N T++ +NL
Sbjct: 192 QINSSLEKLDLGDCDLGMQSVIAFATVLTQNQTIKGINL 230


>gi|301756847|ref|XP_002914276.1| PREDICTED: LOW QUALITY PROTEIN: nucleotide-binding oligomerization
            domain-containing protein 2-like [Ailuropoda melanoleuca]
          Length = 1232

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 25/247 (10%)

Query: 226  RLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITG-CKLLSKALHDCYE 284
            R + L L  N+ G +GVE L   L  S C AL    L +N +   G CKL+  A+H C +
Sbjct: 983  RPMALQLDHNSVGDVGVEQLLPCL--SVCKAL---YLRDNNISDRGVCKLVEHAIH-CQQ 1036

Query: 285  SSK--------KEGSPLALKVFIA----------GRNRLENEGAKMLAAVFKKLKTLERV 326
              K         +G   +L   +A          G N +   GA++LA   +   +L+ +
Sbjct: 1037 LQKLALFNNKLTDGCAHSLARLLACKRNFLALRLGNNHITAAGAQVLAEGLRANGSLQFL 1096

Query: 327  EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
             +  N +   G  AL++A  ++++LR L+L  N I  +GA  L   L K  +L  L L +
Sbjct: 1097 GLWGNKVGDEGAQALAEALRDHQSLRWLSLVGNNIGSRGAQALALMLEKNVALEELCLEE 1156

Query: 387  CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
              L+  G  S+AK L  N+ L+ + L+ N I+  G   L++A++    + ++ +  N F 
Sbjct: 1157 NHLQDEGVCSLAKGLERNSRLKVLKLSNNYITYLGAEALLRALERNDTILEVWLRGNTFS 1216

Query: 447  EEGVEEM 453
             E +E +
Sbjct: 1217 PEEIERL 1223



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%)

Query: 26   GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
            G  AL++A  +++ LR L+L  N I  +GA  L   L K  +L  L L +  L+  G  S
Sbjct: 1107 GAQALAEALRDHQSLRWLSLVGNNIGSRGAQALALMLEKNVALEELCLEENHLQDEGVCS 1166

Query: 86   IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
            +AK L  N+ L+ + L+ N I+  G   L++A++    + ++ +  N F  E +E +
Sbjct: 1167 LAKGLERNSRLKVLKLSNNYITYLGAEALLRALERNDTILEVWLRGNTFSPEEIERL 1223



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%)

Query: 20   NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
            N I   G   L++    N  L+ L L  N +  +GA  L +AL    SL  L+L    + 
Sbjct: 1073 NHITAAGAQVLAEGLRANGSLQFLGLWGNKVGDEGAQALAEALRDHQSLRWLSLVGNNIG 1132

Query: 80   SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            S GA ++A  L  N  LE++ L  N +  +G   L K ++  ++LK + +S N     G 
Sbjct: 1133 SRGAQALALMLEKNVALEELCLEENHLQDEGVCSLAKGLERNSRLKVLKLSNNYITYLGA 1192

Query: 140  EEMEKLMK 147
            E + + ++
Sbjct: 1193 EALLRALE 1200



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 4/150 (2%)

Query: 20   NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
            N I   G+  L +     ++L+ L L +N +T   A  L + L+   +   L LG+  + 
Sbjct: 1017 NNISDRGVCKLVEHAIHCQQLQKLALFNNKLTDGCAHSLARLLACKRNFLALRLGNNHIT 1076

Query: 80   SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
            +AGA  +A+ L  N +L+ + L  N++  +G   L +A+++   L+ +++  N  G  G 
Sbjct: 1077 AAGAQVLAEGLRANGSLQFLGLWGNKVGDEGAQALAEALRDHQSLRWLSLVGNNIGSRGA 1136

Query: 140  EEMEKLMKSFGMAAALVLED----DEGECS 165
            + +  +++       L LE+    DEG CS
Sbjct: 1137 QALALMLEKNVALEELCLEENHLQDEGVCS 1166



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 13/199 (6%)

Query: 260  LKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK 319
            LKL   G+G   C  L+  L       +    P+AL++     N + + G + L      
Sbjct: 959  LKLTFCGVGPAECAALAFVL-------RHLRRPMALQL---DHNSVGDVGVEQLLPCLSV 1008

Query: 320  LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
             K L    +  N I   G+  L +     + L+ L L +N +T   A  L + L+   + 
Sbjct: 1009 CKALY---LRDNNISDRGVCKLVEHAIHCQQLQKLALFNNKLTDGCAHSLARLLACKRNF 1065

Query: 380  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 439
              L LG+  + +AGA  +A+ L  N +L+ + L  N++  +G   L +A+++   L+ ++
Sbjct: 1066 LALRLGNNHITAAGAQVLAEGLRANGSLQFLGLWGNKVGDEGAQALAEALRDHQSLRWLS 1125

Query: 440  VSENQFGEEGVEEMEKLMK 458
            +  N  G  G + +  +++
Sbjct: 1126 LVGNNIGSRGAQALALMLE 1144


>gi|340052758|emb|CCC47042.1| putative ribonuclease inhibitor-like protein [Trypanosoma vivax
           Y486]
          Length = 735

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 25/261 (9%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L+T   L  L+LS N  G  G+  +A  L  +  ++L  L ++ NGLG  G K++S+ L 
Sbjct: 246 LRTNKVLSNLNLSSNGLGVPGITHIAAGLDGN--YSLTHLDISVNGLGYAGVKIISQVLE 303

Query: 281 DC-------YESSKKEGSPLALKVFIA-----GRNRLE----------NEGAKMLAAVFK 318
           +          ++  +   + L   IA     G +R+E           + AK L  V  
Sbjct: 304 NSSITHLSLQRNNITDNGGMVLFQAIATAIENGEDRIEFLNVESNELNEKTAKALQKVLS 363

Query: 319 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 378
               L+ + +  NG +      + +   ENK L  L+++   I      P G ALS   +
Sbjct: 364 TSSALKNLRVSSNG-FGSSSKFIMEGLVENKGLNSLHMSFCEIRDTDGAPFGTALSANST 422

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L  L+L +  L+ AG   IA+ +  N  L  +NL CN+I+ +GG  +   +++   L+ +
Sbjct: 423 LQHLDLSNNKLRDAGTICIAEAMKTNAGLVTLNLACNKITDEGGKAIAMFLRSNNTLRDL 482

Query: 439 NVSENQFGEEGVEEMEKLMKS 459
           N+  N       E +++ ++S
Sbjct: 483 NLRRNCMSHSTGELLDEQLRS 503



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 24/253 (9%)

Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALH 280
           L +  + + LDLS N     G   +A L+  S    L  + L +N +G  G + L+ AL 
Sbjct: 156 LSSNTKYIILDLSGNRLLDAGACFIAKLI--SVNRTLVHIGLRSNDIGHVGGEALANALL 213

Query: 281 DCYESSKKEGSPLALKVF----IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
                  +  + ++L V     I G N +  EGAK +  V +  K L  + +  NG+   
Sbjct: 214 -------QNNTVVSLDVGAHSGING-NHIATEGAKAIGNVLRTNKVLSNLNLSSNGLGVP 265

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL--SKLPSLA-----ILNLGDCLL 389
           GIT ++   + N +L HL+++ N + Y G   + Q L  S +  L+     I + G  +L
Sbjct: 266 GITHIAAGLDGNYSLTHLDISVNGLGYAGVKIISQVLENSSITHLSLQRNNITDNGGMVL 325

Query: 390 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
             A A++I         +E +N+  NE++ +    L K +   + LK + VS N FG   
Sbjct: 326 FQAIATAIE---NGEDRIEFLNVESNELNEKTAKALQKVLSTSSALKNLRVSSNGFGSSS 382

Query: 450 VEEMEKLMKSFGM 462
              ME L+++ G+
Sbjct: 383 KFIMEGLVENKGL 395



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 163/421 (38%), Gaps = 98/421 (23%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKL------RHLNLNDNTITYKGAIPLGQALS 63
           +TL H+ +  N I HVG  AL++A  +N  +       H  +N N I  +GA  +G  L 
Sbjct: 188 RTLVHIGLRSNDIGHVGGEALANALLQNNTVVSLDVGAHSGINGNHIATEGAKAIGNVLR 247

Query: 64  KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
               L+ LNL    L   G + IA  L  N +L  ++++ N +    G+ ++  +   + 
Sbjct: 248 TNKVLSNLNLSSNGLGVPGITHIAAGLDGNYSLTHLDISVNGLGY-AGVKIISQVLENSS 306

Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMA--AALVLEDDEGECSDEEQDEESEEENDSDA 181
           +  +++  N   + G           GM    A+    + GE   E  + ES E N+  A
Sbjct: 307 ITHLSLQRNNITDNG-----------GMVLFQAIATAIENGEDRIEFLNVESNELNEKTA 355

Query: 182 EGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPIG 241
           +     LS                                 T + L  L +S N FG   
Sbjct: 356 KALQKVLS---------------------------------TSSALKNLRVSSNGFG--- 379

Query: 242 VEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCY-ESSKKEGSPLALKVFIA 300
                    SS  F +E L + N GL          +LH  + E    +G+P        
Sbjct: 380 ---------SSSKFIMEGL-VENKGLN---------SLHMSFCEIRDTDGAPF------- 413

Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
                   G  + A       TL+ +++  N +   G   +++A + N  L  LNL  N 
Sbjct: 414 --------GTALSAN-----STLQHLDLSNNKLRDAGTICIAEAMKTNAGLVTLNLACNK 460

Query: 361 ITYKGAIPLGQALSKLPSLAILNL-GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
           IT +G   +   L    +L  LNL  +C+  S G   + + L  NTTLE +++T N+   
Sbjct: 461 ITDEGGKAIAMFLRSNNTLRDLNLRRNCMSHSTG-ELLDEQLRSNTTLEKMDVTYNDFPY 519

Query: 420 Q 420
           +
Sbjct: 520 K 520



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 139/332 (41%), Gaps = 35/332 (10%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL-- 62
           V +  K L ++ +  NG+   GIT ++   + N  L HL+++ N + Y G   + Q L  
Sbjct: 245 VLRTNKVLSNLNLSSNGLGVPGITHIAAGLDGNYSLTHLDISVNGLGYAGVKIISQVLEN 304

Query: 63  SKLPSLA-----ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
           S +  L+     I + G  +L  A A++I         +E +N+  NE++ +    L K 
Sbjct: 305 SSITHLSLQRNNITDNGGMVLFQAIATAIE---NGEDRIEFLNVESNELNEKTAKALQKV 361

Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEEN 177
           +   + LK + VS N FG      ME L+++ G+ +  +       C          E  
Sbjct: 362 LSTSSALKNLRVSSNGFGSSSKFIMEGLVENKGLNSLHM-----SFC----------EIR 406

Query: 178 DSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAF 237
           D+D     + LS N +    + SN    ++            ++KT A LV L+L+ N  
Sbjct: 407 DTDGAPFGTALSANSTLQHLDLSNNKLRDAGTICIAE-----AMKTNAGLVTLNLACNKI 461

Query: 238 GPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHD--CYESSKKEGSPLAL 295
              G + +A  LRS+    L +L L  N +  +  +LL + L      E      +    
Sbjct: 462 TDEGGKAIAMFLRSN--NTLRDLNLRRNCMSHSTGELLDEQLRSNTTLEKMDVTYNDFPY 519

Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKT-LERV 326
           K  I  R  L     K  + V  KL+  +ER+
Sbjct: 520 KCLIGNRTTLARNAEKNKSLVVPKLRAEVERL 551


>gi|397527066|ref|XP_003833425.1| PREDICTED: nucleotide-binding oligomerization domain-containing
           protein 1 [Pan paniscus]
          Length = 953

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 14/238 (5%)

Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYE 284
           +RL  L LS N     GV+ L++ L       +  L L NN +   G + ++K L +C  
Sbjct: 728 SRLTVLRLSVNQITDGGVKVLSEELTKYK--IVTYLGLYNNQITDVGARYVTKILDEC-- 783

Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
              K  + L L     G+N++ +EG K LA   K  K++  V M  N +   G  A ++A
Sbjct: 784 ---KGLTHLKL-----GKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
              + +L  L+L  N I+ +G   L +AL +  SL IL L    L    A S+A+ L  N
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE--GVEEMEKLMKSF 460
            TL+ + L  N+I+ +G   L  A+++ + + +I ++ N    E   V E EK +  F
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQSNSGITEICLNGNLIKPEEAKVYEDEKRIICF 953



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 11/207 (5%)

Query: 254 CFA-LEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKM 312
           CF+ L  L+L+ N +   G K+LS+ L     +  K  + L L       N++ + GA+ 
Sbjct: 726 CFSRLTVLRLSVNQITDGGVKVLSEEL-----TKYKIVTYLGLY-----NNQITDVGARY 775

Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
           +  +  + K L  +++ +N I   G   L+ A + +K++  + +  N +  +GA    +A
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
           L   PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K  
Sbjct: 836 LRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVN 895

Query: 433 TKLKQINVSENQFGEEGVEEMEKLMKS 459
             LK + + +NQ   +G  ++   ++S
Sbjct: 896 QTLKHLWLIQNQITAKGTAQLADALQS 922



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 74/144 (51%)

Query: 5   VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
           +  + K L H+++ +N I   G   L+ A + +K +  + +  N +  +GA    +AL  
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRN 838

Query: 65  LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
            PSL  L+L    + + G  S+A+ L  NT+LE + LT NE++ +    L + +K    L
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898

Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
           K + + +NQ   +G  ++   ++S
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQS 922



 Score = 45.1 bits (105), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 26  GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
           G+  L   F    +L  L L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFS---RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 86  IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 146 MK 147
           ++
Sbjct: 836 LR 837



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G+  L   F     LR   L+ N IT  G   L + L+K   +  L L +  +   GA  
Sbjct: 719 GVRELQPCFSRLTVLR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARY 775

Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
           + K L +   L  + L  N+I+ +GG  L  A+KN   + ++ +  NQ G+EG +   + 
Sbjct: 776 VTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEA 835

Query: 457 MK 458
           ++
Sbjct: 836 LR 837


>gi|399497908|emb|CCG20282.1| Ran GTPase activating protein 2 [Solanum tuberosum subsp.
           andigenum]
          Length = 553

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 125/284 (44%), Gaps = 53/284 (18%)

Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLS------- 276
           G+ L  L+LSDNA G  GV     LL+S     LEEL L N+G+       +S       
Sbjct: 213 GSNLKFLNLSDNALGEKGVRAFGKLLQSQT--NLEELFLMNDGISQEAANAVSELVPSTE 270

Query: 277 --KALHDCYESSKKEG----------SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
             K LH     +  EG          SPL L+ F     R+ +EG  +L         L+
Sbjct: 271 KLKVLHFHNNMTGDEGAVAIAEIVKRSPL-LEDFRCSSTRVGSEGGSVLCEALGMCSHLK 329

Query: 325 RVEMPQNGI-YHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAIL 382
           ++++  N     VG+  L  A  +++NL  + L+   +  +GAI +  AL    PSLA+L
Sbjct: 330 KLDLRDNMFGPEVGLV-LCKALIKHENLTEIYLSYLNLEDEGAIAIANALKDSAPSLAVL 388

Query: 383 ----------------------------NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
                                       +LG+  LK  GA  IAK L  +  L +V+++ 
Sbjct: 389 EMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAIQIAKALEGHNHLIEVDMSS 448

Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
           N +   G   L + + +K + K +NV+ N   EEGV E++++ K
Sbjct: 449 NALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVGELKEIFK 492



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 26  GITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
           G  A+++A +++   L  L +  N IT + A  +   ++    LA L+LG+  LK  GA 
Sbjct: 370 GAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGENELKDEGAI 429

Query: 85  SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
            IAK L  +  L +V+++ N +   G   L + + +K + K +NV+ N   EEGV E+++
Sbjct: 430 QIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFISEEGVGELKE 489

Query: 145 LMK 147
           + K
Sbjct: 490 IFK 492



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 12  LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
           L+ + +  N +   G+ A     +    L  L L ++ I+ + A  + + +     L +L
Sbjct: 216 LKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEKLKVL 275

Query: 72  NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
           +  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++++ +
Sbjct: 276 HFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRD 335

Query: 132 NQFGEE 137
           N FG E
Sbjct: 336 NMFGPE 341



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQ------------------------ALSKL-PS--- 378
           E  NL+ LNL+DN +  KG    G+                        A+S+L PS   
Sbjct: 212 EGSNLKFLNLSDNALGEKGVRAFGKLLQSQTNLEELFLMNDGISQEAANAVSELVPSTEK 271

Query: 379 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
           L +L+  + +    GA +IA+ +  +  LED   +   +  +GG  L +A+   + LK++
Sbjct: 272 LKVLHFHNNMTGDEGAVAIAEIVKRSPLLEDFRCSSTRVGSEGGSVLCEALGMCSHLKKL 331

Query: 439 NVSENQFGEE 448
           ++ +N FG E
Sbjct: 332 DLRDNMFGPE 341


>gi|449666434|ref|XP_004206348.1| PREDICTED: leucine-rich repeat-containing protein 34-like [Hydra
           magnipapillata]
          Length = 426

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 16/241 (6%)

Query: 220 SLKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKAL 279
           +L+    L+ L L  N FGP G   LA++L+ +    LE+L LNN    +T    ++ AL
Sbjct: 165 ALQFNRSLLVLVLDGNKFGPEGGTELANVLQVNS--TLEKLSLNNTDQNMTSLVNMTAAL 222

Query: 280 HDCYESSKKEGSPLALKVFIAGRNRL---ENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
           H             ALK+    R  L   + E A     + K       V + ++GI   
Sbjct: 223 H----------VNKALKILDVTRPLLFSQQEELAIHFGNLLKNNSLFFEVHLGKHGIKDY 272

Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
           G     D   ENK L HL+L+ N +   G   +   L+  P L +LNL     +  GA +
Sbjct: 273 GAERFIDLIMENKTLLHLDLSCNRVCRDGVKFIANYLATNPPLQVLNLAYNKAEDDGAIA 332

Query: 397 IAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
           +++ ++  NT+L  + L  N IS +G   L K++++   LKQ+ +  NQ  +   +   +
Sbjct: 333 LSEAISVRNTSLVTLVLCHNSISGEGLCSLAKSLRSNYTLKQLYIWGNQTNQASCQAFLE 392

Query: 456 L 456
           L
Sbjct: 393 L 393



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 1/132 (0%)

Query: 15  VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
           V + ++GI   G     D   ENK L HL+L+ N +   G   +   L+  P L +LNL 
Sbjct: 262 VHLGKHGIKDYGAERFIDLIMENKTLLHLDLSCNRVCRDGVKFIANYLATNPPLQVLNLA 321

Query: 75  DCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 133
               +  GA ++++ ++  NT+L  + L  N IS +G   L K++++   LKQ+ +  NQ
Sbjct: 322 YNKAEDDGAIALSEAISVRNTSLVTLVLCHNSISGEGLCSLAKSLRSNYTLKQLYIWGNQ 381

Query: 134 FGEEGVEEMEKL 145
             +   +   +L
Sbjct: 382 TNQASCQAFLEL 393



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS-KLPSL 68
           KTL H+++  N +   G+  +++    N  L+ LNL  N     GAI L +A+S +  SL
Sbjct: 285 KTLLHLDLSCNRVCRDGVKFIANYLATNPPLQVLNLAYNKAEDDGAIALSEAISVRNTSL 344

Query: 69  AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT---CNEISVQGGLDLVKAMKNKTKLK 125
             L L    +   G  S+AK L  N TL+ + +     N+ S Q  L+L    K+ T+L 
Sbjct: 345 VTLVLCHNSISGEGLCSLAKSLRSNYTLKQLYIWGNQTNQASCQAFLEL--TCKSPTRLN 402

Query: 126 Q 126
           +
Sbjct: 403 E 403


>gi|443709811|gb|ELU04316.1| hypothetical protein CAPTEDRAFT_117118, partial [Capitella teleta]
          Length = 252

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 18/206 (8%)

Query: 258 EELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKV--------------FIA--- 300
           +E+ L  NGL +TG K  + AL D     K + S   L+V              FI    
Sbjct: 24  KEIALRGNGLSLTGIKACAVALLDNESVEKVDFSDNTLQVPGARCVAEMLRENEFITDLN 83

Query: 301 -GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
              N+L   G  ++A + K    + ++++  NG+       +++   EN +LR LNL+ N
Sbjct: 84  ISDNKLMTGGVTVIADLMKANNYIRKLDLSGNGLGEQDGEMIANILRENFHLRELNLSHN 143

Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
               +G   +G+AL     L IL+L    L+  GA+ IA  L+ N  L+ + L  N   +
Sbjct: 144 CFRVEGGRAIGRALGYNEYLEILDLSWNHLRQGGATEIANGLSQNIGLKQLRLGWNGFHL 203

Query: 420 QGGLDLVKAMKNKTKLKQINVSENQF 445
           +G   +++A++    L +++++ N+ 
Sbjct: 204 EGSKVMMRALQTNATLGELDLTSNRI 229



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 68/134 (50%)

Query: 1   MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
           ++A + K    +  +++  NG+       +++   EN  LR LNL+ N    +G   +G+
Sbjct: 96  VIADLMKANNYIRKLDLSGNGLGEQDGEMIANILRENFHLRELNLSHNCFRVEGGRAIGR 155

Query: 61  ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
           AL     L IL+L    L+  GA+ IA  L+ N  L+ + L  N   ++G   +++A++ 
Sbjct: 156 ALGYNEYLEILDLSWNHLRQGGATEIANGLSQNIGLKQLRLGWNGFHLEGSKVMMRALQT 215

Query: 121 KTKLKQINVSENQF 134
              L +++++ N+ 
Sbjct: 216 NATLGELDLTSNRI 229



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 67/133 (50%)

Query: 6   FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
           F +  T + + +  NG+   GI A + A  +N+ +  ++ +DNT+   GA  + + L + 
Sbjct: 17  FYRGLTEKEIALRGNGLSLTGIKACAVALLDNESVEKVDFSDNTLQVPGARCVAEMLREN 76

Query: 66  PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
             +  LN+ D  L + G + IA  +  N  +  ++L+ N +  Q G  +   ++    L+
Sbjct: 77  EFITDLNISDNKLMTGGVTVIADLMKANNYIRKLDLSGNGLGEQDGEMIANILRENFHLR 136

Query: 126 QINVSENQFGEEG 138
           ++N+S N F  EG
Sbjct: 137 ELNLSHNCFRVEG 149



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 68/133 (51%)

Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL 376
           F +  T + + +  NG+   GI A + A  +N+++  ++ +DNT+   GA  + + L + 
Sbjct: 17  FYRGLTEKEIALRGNGLSLTGIKACAVALLDNESVEKVDFSDNTLQVPGARCVAEMLREN 76

Query: 377 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
             +  LN+ D  L + G + IA  +  N  +  ++L+ N +  Q G  +   ++    L+
Sbjct: 77  EFITDLNISDNKLMTGGVTVIADLMKANNYIRKLDLSGNGLGEQDGEMIANILRENFHLR 136

Query: 437 QINVSENQFGEEG 449
           ++N+S N F  EG
Sbjct: 137 ELNLSHNCFRVEG 149



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 62/133 (46%)

Query: 10  KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
           +++E V+   N +   G   +++   EN+ +  LN++DN +   G   +   +     + 
Sbjct: 49  ESVEKVDFSDNTLQVPGARCVAEMLRENEFITDLNISDNKLMTGGVTVIADLMKANNYIR 108

Query: 70  ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
            L+L    L       IA  L +N  L ++NL+ N   V+GG  + +A+     L+ +++
Sbjct: 109 KLDLSGNGLGEQDGEMIANILRENFHLRELNLSHNCFRVEGGRAIGRALGYNEYLEILDL 168

Query: 130 SENQFGEEGVEEM 142
           S N   + G  E+
Sbjct: 169 SWNHLRQGGATEI 181



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 18/168 (10%)

Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESS 286
           + +L++SDN     GV  +ADL++++    + +L L+ NGLG    ++++  L + +   
Sbjct: 79  ITDLNISDNKLMTGGVTVIADLMKANN--YIRKLDLSGNGLGEQDGEMIANILRENFHLR 136

Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
           +   S    +V          EG + +       + LE +++  N +   G T +++   
Sbjct: 137 ELNLSHNCFRV----------EGGRAIGRALGYNEYLEILDLSWNHLRQGGATEIANGLS 186

Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG------DCL 388
           +N  L+ L L  N    +G+  + +AL    +L  L+L       DCL
Sbjct: 187 QNIGLKQLRLGWNGFHLEGSKVMMRALQTNATLGELDLTSNRIDMDCL 234


>gi|118355419|ref|XP_001010969.1| Protein kinase domain containing protein [Tetrahymena thermophila]
 gi|89292736|gb|EAR90724.1| Protein kinase domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1722

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 25/223 (11%)

Query: 228  VELDLSDNAFGPIGVEGLADL-LRSSCCFALEELKLN--NNGLGITGCKLLSKALHDCYE 284
            + L+LS+N    I V+G+ ++ L  SC   L++LKLN  +N +G+ G +  +  LHD   
Sbjct: 1449 LHLNLSENY---IQVQGINEIGLGLSCLHQLQDLKLNFCDNKIGVQGAQWFASRLHDL-- 1503

Query: 285  SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLE--RVEMPQNGIYHVGITALS 342
               K    L L +     N +++ G + +    +K   +E  R+ + QN I  +G+ ++ 
Sbjct: 1504 ---KLIKSLDLNL---DSNDIQSVGVQYIIQSLQKNTKIESLRLSLYQNNICQIGVNSIE 1557

Query: 343  DAFEENKNLRHLNLN--DNTITYKGAIPLGQALSKLPSLA--ILNLGDCLLKSAGASSIA 398
               ++   L +LN+N  DN I   GA  +G  L KL +L    LNL    +K  GAS++ 
Sbjct: 1558 QFIQKLNKLVYLNINLCDNDIQDPGANSIGNCLEKLKNLKRLYLNLNKNNIKKQGASNLF 1617

Query: 399  KYLTD--NTTLEDVNLTCNEISVQGGLDLVKA---MKNKTKLK 436
            K L    N T   V L  N++  +G  DLV A   +KN + LK
Sbjct: 1618 KGLQQCVNITELSVVLKNNKVGKEGAADLVSALGHLKNMSILK 1660



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 14/199 (7%)

Query: 282  CYESSKKEGSPLAL---KVFIAGRNR-LENEGAKMLAAVFKKLK--TLERVEMPQNGIYH 335
            C++ +K E    A+   K+ +  +N+ +  EGA  L +   K +  T   +++  N I  
Sbjct: 1371 CFQVNKIEEMVYAIQYEKIEVILKNKNITAEGAHQLQSNLIKCQNLTFLILDLQTNAIGI 1430

Query: 336  VGITALSDAFEENKNLR--HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC--LLKS 391
             G T +  + ++ KNL   HLNL++N I  +G   +G  LS L  L  L L  C   +  
Sbjct: 1431 EGATHIGFSLKQLKNLTSLHLNLSENYIQVQGINEIGLGLSCLHQLQDLKLNFCDNKIGV 1490

Query: 392  AGASSIAKYLTDNTTLE--DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS--ENQFGE 447
             GA   A  L D   ++  D+NL  N+I   G   ++++++  TK++ + +S  +N   +
Sbjct: 1491 QGAQWFASRLHDLKLIKSLDLNLDSNDIQSVGVQYIIQSLQKNTKIESLRLSLYQNNICQ 1550

Query: 448  EGVEEMEKLMKSFGMAAAL 466
             GV  +E+ ++       L
Sbjct: 1551 IGVNSIEQFIQKLNKLVYL 1569



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 14   HVEMPQNGIYHVGITALSDAFEENKKLRHLNLN--DNTITYKGAIPLGQALSKLPSLA-- 69
             + + QN I  +G+ ++    ++  KL +LN+N  DN I   GA  +G  L KL +L   
Sbjct: 1540 RLSLYQNNICQIGVNSIEQFIQKLNKLVYLNINLCDNDIQDPGANSIGNCLEKLKNLKRL 1599

Query: 70   ILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKA---MKNKTKL 124
             LNL    +K  GAS++ K L    N T   V L  N++  +G  DLV A   +KN + L
Sbjct: 1600 YLNLNKNNIKKQGASNLFKGLQQCVNITELSVVLKNNKVGKEGAADLVSALGHLKNMSIL 1659

Query: 125  K 125
            K
Sbjct: 1660 K 1660



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 6/120 (5%)

Query: 42   HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC--LLKSAGASSIAKYLTDNTTLE-- 97
            HLNL++N I  +G   +G  LS L  L  L L  C   +   GA   A  L D   ++  
Sbjct: 1450 HLNLSENYIQVQGINEIGLGLSCLHQLQDLKLNFCDNKIGVQGAQWFASRLHDLKLIKSL 1509

Query: 98   DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS--ENQFGEEGVEEMEKLMKSFGMAAAL 155
            D+NL  N+I   G   ++++++  TK++ + +S  +N   + GV  +E+ ++       L
Sbjct: 1510 DLNLDSNDIQSVGVQYIIQSLQKNTKIESLRLSLYQNNICQIGVNSIEQFIQKLNKLVYL 1569



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 9/144 (6%)

Query: 7    KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLR--HLNLNDNTITYKGAIPLGQALSK 64
            K +K+L+ + +  N I  VG+  +  + ++N K+    L+L  N I   G   + Q + K
Sbjct: 1504 KLIKSLD-LNLDSNDIQSVGVQYIIQSLQKNTKIESLRLSLYQNNICQIGVNSIEQFIQK 1562

Query: 65   LPSLAILNLGDCL--LKSAGASSIAKYLTDNTTLEDV--NLTCNEISVQGGLDLVKAMKN 120
            L  L  LN+  C   ++  GA+SI   L     L+ +  NL  N I  QG  +L K ++ 
Sbjct: 1563 LNKLVYLNINLCDNDIQDPGANSIGNCLEKLKNLKRLYLNLNKNNIKKQGASNLFKGLQQ 1622

Query: 121  KTKLKQINV--SENQFGEEGVEEM 142
               + +++V    N+ G+EG  ++
Sbjct: 1623 CVNITELSVVLKNNKVGKEGAADL 1646


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.310    0.128    0.349 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,864,500,025
Number of Sequences: 23463169
Number of extensions: 288866896
Number of successful extensions: 2966255
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8102
Number of HSP's successfully gapped in prelim test: 7427
Number of HSP's that attempted gapping in prelim test: 2500081
Number of HSP's gapped (non-prelim): 324394
length of query: 472
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 326
effective length of database: 8,933,572,693
effective search space: 2912344697918
effective search space used: 2912344697918
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)