Your job contains 1 sequence.
>psy3611
MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ
ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN
KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDEEQDEESEEENDSD
AEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHMSLKTGARLVELDLSDNAFGPI
GVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVFIA
GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT
ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ
GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3611
(472 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P46060 - symbol:RANGAP1 "Ran GTPase-activating ... 580 3.3e-61 2
UNIPROTKB|F1MFD5 - symbol:RANGAP1 "Uncharacterized protei... 583 5.4e-61 2
UNIPROTKB|F1NIE8 - symbol:RANGAP1 "Uncharacterized protei... 566 4.2e-59 2
UNIPROTKB|F1PVY6 - symbol:RANGAP1 "Uncharacterized protei... 560 8.8e-59 2
UNIPROTKB|J9NZ28 - symbol:RANGAP1 "Uncharacterized protei... 560 8.8e-59 2
UNIPROTKB|O13066 - symbol:rangap1 "Ran GTPase-activating ... 570 1.8e-58 2
MGI|MGI:103071 - symbol:Rangap1 "RAN GTPase activating pr... 561 1.8e-58 2
RGD|1310380 - symbol:Rangap1 "RAN GTPase activating prote... 554 3.8e-58 2
UNIPROTKB|F1MAA5 - symbol:Rangap1 "Protein Rangap1" speci... 544 4.2e-57 2
ZFIN|ZDB-GENE-060929-492 - symbol:rangap1a "RAN GTPase ac... 548 3.8e-56 2
WB|WBGene00004303 - symbol:ran-2 species:6239 "Caenorhabd... 396 1.5e-55 2
ZFIN|ZDB-GENE-040426-1921 - symbol:rangap1b "Ran GTPase a... 539 5.6e-52 1
FB|FBgn0003346 - symbol:RanGAP "Ran GTPase activating pro... 496 9.9e-52 2
UNIPROTKB|F8W7I9 - symbol:RANGAP1 "Ran GTPase-activating ... 326 3.8e-36 3
UNIPROTKB|H0Y4Q3 - symbol:RANGAP1 "Ran GTPase-activating ... 315 4.9e-33 2
UNIPROTKB|Q7RTR2 - symbol:NLRC3 "Protein NLRC3" species:9... 195 1.3e-23 2
MGI|MGI:2444070 - symbol:Nlrc3 "NLR family, CARD domain c... 202 1.4e-20 2
POMBASE|SPAC22E12.07 - symbol:rna1 "Ran GAP Rna1" species... 257 2.3e-20 1
CGD|CAL0000022 - symbol:RNA1 species:5476 "Candida albica... 254 9.6e-20 1
TAIR|locus:2194604 - symbol:emb2004 "embryo defective 200... 160 4.1e-19 2
SGD|S000004848 - symbol:RNA1 "GTPase activating protein (... 219 3.3e-17 2
ASPGD|ASPL0000071633 - symbol:ranGAP species:162425 "Emer... 226 2.5e-16 1
ZFIN|ZDB-GENE-050208-711 - symbol:si:ch211-213a13.5 "si:c... 178 6.0e-16 2
MGI|MGI:1919077 - symbol:Lrrc34 "leucine rich repeat cont... 156 1.7e-14 2
UNIPROTKB|P10775 - symbol:RNH1 "Ribonuclease inhibitor" s... 159 1.8e-14 2
RGD|1565052 - symbol:Lrrc34 "leucine rich repeat containi... 152 1.9e-14 2
UNIPROTKB|G4MXL7 - symbol:MGG_01248 "Ran GTPase-activatin... 206 5.4e-14 1
TAIR|locus:2150285 - symbol:RANGAP2 "AT5G19320" species:3... 176 7.9e-14 2
MGI|MGI:3612191 - symbol:Nlrc5 "NLR family, CARD domain c... 166 1.4e-13 4
UNIPROTKB|Q86W24 - symbol:NLRP14 "NACHT, LRR and PYD doma... 168 1.5e-13 2
RGD|621398 - symbol:Rnh1 "ribonuclease/angiogenin inhibit... 160 2.4e-13 2
RGD|2321956 - symbol:LOC100360501 "ribonuclease inhibitor... 159 3.2e-13 2
UNIPROTKB|P13489 - symbol:RNH1 "Ribonuclease inhibitor" s... 132 4.9e-13 2
UNIPROTKB|Q5ZIY8 - symbol:RNH1 "Uncharacterized protein" ... 136 1.4e-12 2
TAIR|locus:2099207 - symbol:RANGAP1 "AT3G63130" species:3... 168 3.0e-12 2
UNIPROTKB|E2RJ74 - symbol:NLRP14 "Uncharacterized protein... 140 4.3e-12 2
UNIPROTKB|F1RMK8 - symbol:LOC100622751 "Uncharacterized p... 128 5.0e-12 2
MGI|MGI:1921935 - symbol:4930451C15Rik "RIKEN cDNA 493045... 186 8.6e-12 1
ZFIN|ZDB-GENE-061108-4 - symbol:nod2 "nucleotide-binding ... 185 1.2e-11 2
MGI|MGI:1195456 - symbol:Rnh1 "ribonuclease/angiogenin in... 154 1.6e-11 2
UNIPROTKB|Q9Y239 - symbol:NOD1 "Nucleotide-binding oligom... 176 2.4e-11 2
UNIPROTKB|Q86WI3 - symbol:NLRC5 "Protein NLRC5" species:9... 135 7.0e-11 2
UNIPROTKB|Q96P20 - symbol:NLRP3 "NACHT, LRR and PYD domai... 184 8.1e-11 1
UNIPROTKB|E1B7V7 - symbol:NOD1 "Uncharacterized protein" ... 163 9.3e-11 2
MGI|MGI:2653833 - symbol:Nlrp3 "NLR family, pyrin domain ... 163 1.2e-10 2
UNIPROTKB|E1BDZ4 - symbol:LOC782386 "Uncharacterized prot... 136 1.3e-10 2
DICTYBASE|DDB_G0295827 - symbol:DDB_G0295827 "leucine-ric... 148 2.6e-10 2
UNIPROTKB|B0FPE9 - symbol:NLRP3 "NACHT, LRR and PYD domai... 179 2.9e-10 1
UNIPROTKB|E2RI72 - symbol:PPP1R37 "Uncharacterized protei... 128 3.3e-10 2
UNIPROTKB|E1C3J0 - symbol:LOC100859479 "Uncharacterized p... 153 3.5e-10 2
DICTYBASE|DDB_G0293920 - symbol:DDB_G0293920 species:4468... 152 3.7e-10 2
UNIPROTKB|E2R9L3 - symbol:NOD1 "Uncharacterized protein" ... 175 4.6e-10 2
UNIPROTKB|F1PK29 - symbol:RNH1 "Uncharacterized protein" ... 121 4.8e-10 2
UNIPROTKB|F1MMJ6 - symbol:LRRC16A "Uncharacterized protei... 125 6.1e-10 2
ZFIN|ZDB-GENE-050208-7 - symbol:ppp1r37 "protein phosphat... 117 7.6e-10 2
UNIPROTKB|A6QLE5 - symbol:NLRP3 "NACHT, LRR and PYD domai... 154 9.0e-10 2
DICTYBASE|DDB_G0289313 - symbol:frmC "Band 4.1 domain-con... 122 1.0e-09 2
RGD|1562269 - symbol:Nod1 "nucleotide-binding oligomeriza... 172 1.5e-09 1
MGI|MGI:2687042 - symbol:Ppp1r37 "protein phosphatase 1, ... 121 2.0e-09 2
ZFIN|ZDB-GENE-081028-16 - symbol:si:ch211-233m11.1 "si:ch... 135 2.1e-09 2
RGD|1595870 - symbol:Ppp1r37 "protein phosphatase 1, regu... 121 2.5e-09 2
MGI|MGI:1341839 - symbol:Nod1 "nucleotide-binding oligome... 170 2.6e-09 1
RGD|1308314 - symbol:Nlrp3 "NLR family, pyrin domain cont... 165 3.1e-09 2
UNIPROTKB|Q86W25 - symbol:NLRP13 "NACHT, LRR and PYD doma... 152 3.1e-09 2
UNIPROTKB|A7Z026 - symbol:PPP1R37 "Protein phosphatase 1 ... 121 3.4e-09 2
MGI|MGI:98640 - symbol:Tcte1 "t-complex-associated testis... 164 4.4e-09 1
UNIPROTKB|Q647I9 - symbol:NLRP5 "NACHT, LRR and PYD domai... 121 4.5e-09 2
UNIPROTKB|F1MT67 - symbol:NLRP5 "NACHT, LRR and PYD domai... 121 4.5e-09 2
UNIPROTKB|F1RTQ8 - symbol:LRRC16A "Uncharacterized protei... 117 4.6e-09 2
UNIPROTKB|O75864 - symbol:PPP1R37 "Protein phosphatase 1 ... 115 8.6e-09 2
MGI|MGI:1915982 - symbol:Lrrc16a "leucine rich repeat con... 119 1.2e-08 2
RGD|1306623 - symbol:Lrrc16a "leucine rich repeat contain... 118 1.4e-08 2
UNIPROTKB|F1NYZ9 - symbol:F1NYZ9 "Uncharacterized protein... 124 1.5e-08 3
UNIPROTKB|F1LYY4 - symbol:Lrrc16a "Protein Lrrc16a" speci... 118 1.5e-08 2
UNIPROTKB|F1NWT4 - symbol:F1NWT4 "Uncharacterized protein... 123 1.7e-08 2
UNIPROTKB|Q5VZK9 - symbol:LRRC16A "Leucine-rich repeat-co... 117 2.6e-08 2
UNIPROTKB|F1PS97 - symbol:NLRP8 "Uncharacterized protein"... 137 2.6e-08 2
UNIPROTKB|Q6E804 - symbol:NOD2 "Nucleotide-binding oligom... 160 3.5e-08 1
ZFIN|ZDB-GENE-070912-120 - symbol:si:ch211-156p11.1 "si:c... 125 5.4e-08 2
UNIPROTKB|E1B9F2 - symbol:E1B9F2 "Uncharacterized protein... 115 6.4e-08 3
UNIPROTKB|F1P9K0 - symbol:NOD2 "Uncharacterized protein" ... 156 9.5e-08 2
UNIPROTKB|F1RMM7 - symbol:LOC100519960 "Uncharacterized p... 121 1.1e-07 2
UNIPROTKB|E1BR67 - symbol:NOD1 "Uncharacterized protein" ... 159 1.2e-07 2
UNIPROTKB|Q96MN2 - symbol:NLRP4 "NACHT, LRR and PYD domai... 129 1.4e-07 2
DICTYBASE|DDB_G0290439 - symbol:gacW "RhoGAP domain-conta... 140 1.6e-07 2
MGI|MGI:1924108 - symbol:Nlrp14 "NLR family, pyrin domain... 149 1.6e-07 2
DICTYBASE|DDB_G0282605 - symbol:DDB_G0282605 "Rho GTPase ... 150 1.9e-07 1
UNIPROTKB|Q8IZ02 - symbol:LRRC34 "Leucine-rich repeat-con... 148 2.0e-07 1
TAIR|locus:2083028 - symbol:AT3G06000 species:3702 "Arabi... 138 2.5e-07 1
MGI|MGI:2429397 - symbol:Nod2 "nucleotide-binding oligome... 146 3.8e-07 2
DICTYBASE|DDB_G0292386 - symbol:carmil "leucine-rich repe... 110 4.2e-07 2
UNIPROTKB|B0QYT4 - symbol:RANGAP1 "Ran GTPase-activating ... 93 6.3e-07 2
UNIPROTKB|F1PS92 - symbol:NLRP9 "Uncharacterized protein"... 105 6.5e-07 2
UNIPROTKB|Q9HC29 - symbol:NOD2 "Nucleotide-binding oligom... 137 1.8e-06 2
UNIPROTKB|F1PSA2 - symbol:NLRP5 "Uncharacterized protein"... 104 1.9e-06 2
RGD|1306368 - symbol:Nod2 "nucleotide-binding oligomeriza... 143 2.6e-06 1
UNIPROTKB|F1NAC7 - symbol:F1NAC7 "Uncharacterized protein... 141 2.9e-06 1
UNIPROTKB|F1PS72 - symbol:NLRP13 "Uncharacterized protein... 123 3.3e-06 2
ZFIN|ZDB-GENE-060421-8264 - symbol:zgc:136791 "zgc:136791... 141 3.9e-06 1
UNIPROTKB|E9PFE0 - symbol:CIITA "MHC class II transactiva... 138 3.9e-06 1
WARNING: Descriptions of 63 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|P46060 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005643 "nuclear pore" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0046826 "negative regulation of protein
export from nucleus" evidence=IDA] [GO:0032853 "positive regulation
of Ran GTPase activity" evidence=TAS] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_115566
GO:GO:0007165 Reactome:REACT_21300 GO:GO:0031965 GO:GO:0005643
GO:GO:0000922 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0000236 GO:GO:0046826 GO:GO:0000777 EMBL:AL035681
Pathway_Interaction_DB:ranbp2pathway eggNOG:COG5238 KO:K14319
GO:GO:0005098 PANTHER:PTHR24113 EMBL:X82260 EMBL:AB058738
EMBL:CR456557 EMBL:BC014044 EMBL:BC041396 IPI:IPI00294879
PIR:JC5300 RefSeq:NP_002874.1 UniGene:Hs.183800 PDB:1Z5S PDB:2GRN
PDB:2GRO PDB:2GRP PDB:2GRQ PDB:2GRR PDB:2IO2 PDB:2IO3 PDB:2IY0
PDB:3UIN PDB:3UIO PDB:3UIP PDBsum:1Z5S PDBsum:2GRN PDBsum:2GRO
PDBsum:2GRP PDBsum:2GRQ PDBsum:2GRR PDBsum:2IO2 PDBsum:2IO3
PDBsum:2IY0 PDBsum:3UIN PDBsum:3UIO PDBsum:3UIP
ProteinModelPortal:P46060 SMR:P46060 DIP:DIP-29079N IntAct:P46060
MINT:MINT-3016328 STRING:P46060 PhosphoSite:P46060 DMDM:1172922
PaxDb:P46060 PRIDE:P46060 DNASU:5905 Ensembl:ENST00000356244
Ensembl:ENST00000405383 Ensembl:ENST00000405486
Ensembl:ENST00000455915 GeneID:5905 KEGG:hsa:5905 UCSC:uc003azs.3
CTD:5905 GeneCards:GC22M041641 HGNC:HGNC:9854 HPA:CAB004293
MIM:602362 neXtProt:NX_P46060 PharmGKB:PA34216 HOGENOM:HOG000195026
HOVERGEN:HBG017720 InParanoid:P46060 OMA:SFNSNAF OrthoDB:EOG4K0QN7
ChiTaRS:RANGAP1 EvolutionaryTrace:P46060 GenomeRNAi:5905
NextBio:22968 ArrayExpress:P46060 Bgee:P46060 CleanEx:HS_RANGAP1
Genevestigator:P46060 GermOnline:ENSG00000100401 Gene3D:1.25.40.200
SUPFAM:SSF69099 Uniprot:P46060
Length = 587
Score = 580 (209.2 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 120/254 (47%), Positives = 166/254 (65%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+LVELDLSDNAFGP GV+G LL+SS CF I G K+L+ AL
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALT 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C+ S +G PLALKVF+AGRNRLEN+GA LA F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITA 227
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ AF N LR +NLNDNT T KGA+ + + L L + ++N GDCL++S GA +IA
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L+++NL+ EI L + +AM +K +L++++++ N GEEG E+++++++
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 347
Query: 460 FGMAAALV-LEDDE 472
F MA L L DDE
Sbjct: 348 FNMAKVLASLSDDE 361
Score = 325 (119.5 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 66/155 (42%), Positives = 101/155 (65%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F+ + TLE V MPQNGI H GITAL+ AF N LR +NLNDNT T KGA+ + +
Sbjct: 200 LAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAET 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
L L + ++N GDCL++S GA +IA + L+++NL+ EI L + +AM +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMAD 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K +L++++++ N GEEG E+++++++ F MA L
Sbjct: 320 KAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354
Score = 141 (54.7 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + + G LA F L + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLV 276
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
KGA+ + A+ LP L LNL C +K A ++A+ + D LE ++L N + +
Sbjct: 277 RSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEE 336
Query: 421 GGLDLVKAMK--NKTK-LKQINVSENQFGEEGVEEMEK 455
G L + ++ N K L ++ E++ EE EE E+
Sbjct: 337 GCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEE 374
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F L + + N G A+++ + +++ +N D + KGA+ + A
Sbjct: 228 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287
Query: 62 L-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK- 119
+ LP L LNL C +K A ++A+ + D LE ++L N + +G L + ++
Sbjct: 288 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 347
Query: 120 -NKTK-LKQINVSENQFGEEGVEEMEK 144
N K L ++ E++ EE EE E+
Sbjct: 348 FNMAKVLASLSDDEDEEEEEEGEEEEE 374
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 32/113 (28%), Positives = 58/113 (51%)
Query: 19 QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
+N + + G TAL++AF L +++ N I + G L QA + P L ++NL D
Sbjct: 189 RNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTF 248
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVS 130
GA ++A+ L +E +N + +G + + A++ KLK++N+S
Sbjct: 249 TEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLS 301
Score = 64 (27.6 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + D +LE + L N + V+ + KA++ K++LK+ + S+
Sbjct: 38 AKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSD 86
Score = 62 (26.9 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV+ E L+KS
Sbjct: 113 QLVELDLSDNAFGPDGVQGFEALLKS 138
Score = 40 (19.1 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
E+ L L L NT+ + A + +AL K L
Sbjct: 46 EDFDSLEALRLEGNTVGVEAARVIAKALEKKSEL 79
>UNIPROTKB|F1MFD5 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0005098 "Ran GTPase
activator activity" evidence=IEA] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471 GO:GO:0007165
GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:DAAA02014729
EMBL:DAAA02014730 IPI:IPI00876799 UniGene:Bt.11079
Ensembl:ENSBTAT00000012125 ArrayExpress:F1MFD5 Uniprot:F1MFD5
Length = 585
Score = 583 (210.3 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 120/254 (47%), Positives = 167/254 (65%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+LVELDLSDNAFGP GV G LL+SS CF I G K+L+ AL
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C+ S +G PLALKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ AF N LR +NLNDNT T KGA+ + + L L + ++N GDCL++S GA +IA
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAIAIADA 287
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L+++NL+ EI + L + +A+ +KT+L++++++ N GEEG E+++++++
Sbjct: 288 IHGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEEGCEQLQEVLEG 347
Query: 460 FGMAAALV-LEDDE 472
F MAA L L DDE
Sbjct: 348 FNMAAVLASLSDDE 361
Score = 330 (121.2 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 66/155 (42%), Positives = 103/155 (66%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F + TLE V MPQNGI H G+TAL+ AF N LR +NLNDNT T KGA+ + +
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
L L + ++N GDCL++S GA +IA + L+++NL+ EI + L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAIAIADAIHGGLPKLKELNLSFGEIKREAALSVAEAVAD 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
KT+L++++++ N GEEG E+++++++ F MAA L
Sbjct: 320 KTELEKLDLNGNMLGEEGCEQLQEVLEGFNMAAVL 354
Score = 126 (49.4 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 39/156 (25%), Positives = 73/156 (46%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + + G LA F L + + N G A++ + + + +N D +
Sbjct: 217 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLV 276
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
KGAI + A+ LP L LNL +K A S+A+ + D T LE ++L N + +
Sbjct: 277 RSKGAIAIADAIHGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEE 336
Query: 421 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEMEK 455
G L + ++ + ++S+++ GE+ +E E+
Sbjct: 337 GCEQLQEVLEGFNMAAVLASLSDDE-GEDDEDEDEE 371
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 36/119 (30%), Positives = 60/119 (50%)
Query: 19 QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
+N + + G TAL++AF L +++ N I + G L QA + P L ++NL D
Sbjct: 189 RNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTF 248
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGE 136
GA ++AK L +E +N + +G + + A+ KLK++N+S FGE
Sbjct: 249 TEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAIAIADAIHGGLPKLKELNLS---FGE 304
Score = 60 (26.2 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV E L+KS
Sbjct: 113 QLVELDLSDNAFGPDGVRGFEALLKS 138
Score = 59 (25.8 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + D LE + L N + V+ + KA++ K +LK+ + S+
Sbjct: 38 AKDVIKEIEDFDGLEALRLEGNTVGVEAARVIAKALEKKPELKRCHWSD 86
Score = 46 (21.3 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
E+ L L L NT+ + A + +AL K P L
Sbjct: 46 EDFDGLEALRLEGNTVGVEAARVIAKALEKKPEL 79
>UNIPROTKB|F1NIE8 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0046826 "negative
regulation of protein export from nucleus" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471
GO:GO:0007165 GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:AADN02006075
EMBL:AADN02006074 IPI:IPI00583992 PRIDE:F1NIE8
Ensembl:ENSGALT00000019518 ArrayExpress:F1NIE8 Uniprot:F1NIE8
Length = 579
Score = 566 (204.3 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 116/254 (45%), Positives = 165/254 (64%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+LVELDLSDNAFGP GV G LL+S C+ I G K+L+ AL
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACYTLQELKLNNCGMGIGGGKILAAALK 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C+ S +G PLALK+F+AGRNRLEN+GA LA F + TLE V MPQNGI H GITA
Sbjct: 168 ECHRKSSAQGKPLALKIFMAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITA 227
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ AF N L+ +NLNDNT T KGA+ + + L L + ++N GDCL++S GA +IA
Sbjct: 228 LAQAFAINSLLKVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLVRSKGALAIADA 287
Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
L + L+++NL+ EI L + +A+++K +L++++++ N GEEG E+++++++
Sbjct: 288 LKEGLHKLKELNLSFCEIKRDAALSVAEAIEDKVELEKLDLNGNSLGEEGCEQLQEILEG 347
Query: 460 FGMAAAL-VLEDDE 472
F MA L L DDE
Sbjct: 348 FNMATVLGSLSDDE 361
Score = 325 (119.5 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 65/155 (41%), Positives = 102/155 (65%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F + TLE V MPQNGI H GITAL+ AF N L+ +NLNDNT T KGA+ + +
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINSLLKVINLNDNTFTEKGAVAMAET 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
L L + ++N GDCL++S GA +IA L + L+++NL+ EI L + +A+++
Sbjct: 260 LKALRQVEVINFGDCLVRSKGALAIADALKEGLHKLKELNLSFCEIKRDAALSVAEAIED 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K +L++++++ N GEEG E+++++++ F MA L
Sbjct: 320 KVELEKLDLNGNSLGEEGCEQLQEILEGFNMATVL 354
Score = 137 (53.3 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + + G LA F L+ + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGITALAQAFAINSLLKVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLV 276
Query: 362 TYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
KGA+ + AL + L L LNL C +K A S+A+ + D LE ++L N + +
Sbjct: 277 RSKGALAIADALKEGLHKLKELNLSFCEIKRDAALSVAEAIEDKVELEKLDLNGNSLGEE 336
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
G L + ++ + + GEE EE E+
Sbjct: 337 GCEQLQEILEGFNMATVLGSLSDDEGEEEDEEEEE 371
Score = 128 (50.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 37/144 (25%), Positives = 66/144 (45%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F L+ + + N G A+++ + +++ +N D + KGA+ + A
Sbjct: 228 LAQAFAINSLLKVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLVRSKGALAIADA 287
Query: 62 LSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L + L L LNL C +K A S+A+ + D LE ++L N + +G L + ++
Sbjct: 288 LKEGLHKLKELNLSFCEIKRDAALSVAEAIEDKVELEKLDLNGNSLGEEGCEQLQEILEG 347
Query: 121 KTKLKQINVSENQFGEEGVEEMEK 144
+ + GEE EE E+
Sbjct: 348 FNMATVLGSLSDDEGEEEDEEEEE 371
Score = 60 (26.2 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV E L+KS
Sbjct: 113 QLVELDLSDNAFGPDGVRGFEALLKS 138
Score = 58 (25.5 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + + LE + L N + V+ + KA++ K++LK+ + S+
Sbjct: 38 AEEVIKQIEEFDGLEALRLEGNTVGVEAAKVIAKALEKKSELKRCHWSD 86
Score = 41 (19.5 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
EE L L L NT+ + A + +AL K L
Sbjct: 46 EEFDGLEALRLEGNTVGVEAAKVIAKALEKKSEL 79
>UNIPROTKB|F1PVY6 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 GO:GO:0032853 GeneTree:ENSGT00440000039203
GO:GO:0005098 PANTHER:PTHR24113 Gene3D:1.25.40.200 SUPFAM:SSF69099
EMBL:AAEX03007299 Ensembl:ENSCAFT00000001695 Uniprot:F1PVY6
Length = 628
Score = 560 (202.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 117/254 (46%), Positives = 162/254 (63%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+LVELDLSDNAFGP GV G LL+SS CF I G K+L+ AL
Sbjct: 149 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 208
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C+ S +G PL LKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TA
Sbjct: 209 ECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 268
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ AF N LR +NLNDNT T KGA+ + + L L ++N GDCL++S GA +IA+
Sbjct: 269 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEA 328
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L+++NL+ EI L + +A+ +K +L++++++ N GEEG E++++++
Sbjct: 329 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVLDG 388
Query: 460 FGMAAALV-LEDDE 472
F MA L L DDE
Sbjct: 389 FNMARVLASLSDDE 402
Score = 311 (114.5 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 64/155 (41%), Positives = 99/155 (63%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F + TLE V MPQNGI H G+TAL+ AF N LR +NLNDNT T KGA+ + +
Sbjct: 241 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 300
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
L L ++N GDCL++S GA +IA+ + L+++NL+ EI L + +A+ +
Sbjct: 301 LKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 360
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K +L++++++ N GEEG E++++++ F MA L
Sbjct: 361 KAELEKLDLNGNMLGEEGCEQLQEVLDGFNMARVL 395
Score = 132 (51.5 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + + G LA F L + + N G A++ + + +N D +
Sbjct: 258 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLV 317
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
KGA+ + +A+ LP L LNL C +K A ++A+ + D LE ++L N + +
Sbjct: 318 RSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEE 377
Query: 421 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEMEK 455
G L + + + + ++S+++ GE+ EE E+
Sbjct: 378 GCEQLQEVLDGFNMARVLASLSDDE-GEDDEEEEEE 412
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 36/145 (24%), Positives = 69/145 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F L + + N G A++ + ++ +N D + KGA+ + +A
Sbjct: 269 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEA 328
Query: 62 L-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ LP L LNL C +K A ++A+ + D LE ++L N + +G L + +
Sbjct: 329 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVLDG 388
Query: 121 KTKLKQI-NVSENQFGEEGVEEMEK 144
+ + ++S+++ GE+ EE E+
Sbjct: 389 FNMARVLASLSDDE-GEDDEEEEEE 412
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 19 QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
+N + + G TAL++AF L +++ N I + G L QA + P L ++NL D
Sbjct: 230 RNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTF 289
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVS 130
GA ++AK L E +N + +G + + +A++ KLK++N+S
Sbjct: 290 TEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLS 342
Score = 61 (26.5 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + D LE + L N + V+ + KA++ K++LK+ + S+
Sbjct: 79 AKDVIKEIEDFDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSD 127
Score = 60 (26.2 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV E L+KS
Sbjct: 154 QLVELDLSDNAFGPDGVRGFEALLKS 179
Score = 38 (18.4 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
E+ L L L NT+ + A + +AL K L
Sbjct: 87 EDFDGLEALRLEGNTVGVEAARVIAKALEKKSEL 120
>UNIPROTKB|J9NZ28 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 GO:GO:0032853 GeneTree:ENSGT00440000039203
GO:GO:0005098 PANTHER:PTHR24113 OMA:SFNSNAF Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:AAEX03007299 Ensembl:ENSCAFT00000043188
Uniprot:J9NZ28
Length = 641
Score = 560 (202.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 117/254 (46%), Positives = 162/254 (63%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+LVELDLSDNAFGP GV G LL+SS CF I G K+L+ AL
Sbjct: 162 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALT 221
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C+ S +G PL LKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TA
Sbjct: 222 ECHRKSSAQGKPLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 281
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ AF N LR +NLNDNT T KGA+ + + L L ++N GDCL++S GA +IA+
Sbjct: 282 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEA 341
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L+++NL+ EI L + +A+ +K +L++++++ N GEEG E++++++
Sbjct: 342 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVLDG 401
Query: 460 FGMAAALV-LEDDE 472
F MA L L DDE
Sbjct: 402 FNMARVLASLSDDE 415
Score = 311 (114.5 bits), Expect = 5.4e-27, P = 5.4e-27
Identities = 64/155 (41%), Positives = 99/155 (63%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F + TLE V MPQNGI H G+TAL+ AF N LR +NLNDNT T KGA+ + +
Sbjct: 254 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT 313
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
L L ++N GDCL++S GA +IA+ + L+++NL+ EI L + +A+ +
Sbjct: 314 LKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD 373
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K +L++++++ N GEEG E++++++ F MA L
Sbjct: 374 KAELEKLDLNGNMLGEEGCEQLQEVLDGFNMARVL 408
Score = 132 (51.5 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + + G LA F L + + N G A++ + + +N D +
Sbjct: 271 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLV 330
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
KGA+ + +A+ LP L LNL C +K A ++A+ + D LE ++L N + +
Sbjct: 331 RSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEE 390
Query: 421 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEMEK 455
G L + + + + ++S+++ GE+ EE E+
Sbjct: 391 GCEQLQEVLDGFNMARVLASLSDDE-GEDDEEEEEE 425
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 36/145 (24%), Positives = 69/145 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F L + + N G A++ + ++ +N D + KGA+ + +A
Sbjct: 282 LAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEA 341
Query: 62 L-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ LP L LNL C +K A ++A+ + D LE ++L N + +G L + +
Sbjct: 342 VRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVLDG 401
Query: 121 KTKLKQI-NVSENQFGEEGVEEMEK 144
+ + ++S+++ GE+ EE E+
Sbjct: 402 FNMARVLASLSDDE-GEDDEEEEEE 425
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 19 QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
+N + + G TAL++AF L +++ N I + G L QA + P L ++NL D
Sbjct: 243 RNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTF 302
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVS 130
GA ++AK L E +N + +G + + +A++ KLK++N+S
Sbjct: 303 TEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLS 355
Score = 61 (26.5 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + D LE + L N + V+ + KA++ K++LK+ + S+
Sbjct: 92 AKDVIKEIEDFDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSD 140
Score = 60 (26.2 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV E L+KS
Sbjct: 167 QLVELDLSDNAFGPDGVRGFEALLKS 192
Score = 38 (18.4 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
E+ L L L NT+ + A + +AL K L
Sbjct: 100 EDFDGLEALRLEGNTVGVEAARVIAKALEKKSEL 133
>UNIPROTKB|O13066 [details] [associations]
symbol:rangap1 "Ran GTPase-activating protein 1"
species:8355 "Xenopus laevis" [GO:0000776 "kinetochore"
evidence=ISS] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0005737 GO:GO:0007165 GO:GO:0032853 GO:GO:0005098
PANTHER:PTHR24113 HOVERGEN:HBG017720 Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:U88155 UniGene:Xl.57165
ProteinModelPortal:O13066 SMR:O13066 PRIDE:O13066
Xenbase:XB-GENE-6464329 Uniprot:O13066
Length = 580
Score = 570 (205.7 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 116/254 (45%), Positives = 167/254 (65%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+L ELDLSDNAFGP GV G LL+S CF I G K+L+ AL
Sbjct: 108 ITAGAQLTELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGKILAAALT 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C++ S G PLALKVFIAGRNRLEN+GA L+ F+ + TLE V MPQNGI H GITA
Sbjct: 168 ECHKKSSAHGKPLALKVFIAGRNRLENDGATALSEAFRLIGTLEEVHMPQNGINHAGITA 227
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+++F+ N L+ +NLNDNT T KG + + +AL L + ++N GDCL++S GA +IA
Sbjct: 228 LAESFKANSLLKVINLNDNTFTEKGGVAMAEALKTLRQVEVINFGDCLVRSKGAQAIASA 287
Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
L + L+D+NL+ EI + L +++++K+ L++++++ N GEEG E+++++++S
Sbjct: 288 LKEGLHKLKDLNLSYCEIKADAAVSLAESVEDKSDLEKLDLNGNCLGEEGCEQVQEILES 347
Query: 460 FGMAAAL-VLEDDE 472
MA L L DDE
Sbjct: 348 INMANILGSLSDDE 361
Score = 329 (120.9 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 63/155 (40%), Positives = 105/155 (67%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L+ F+ + TLE V MPQNGI H GITAL+++F+ N L+ +NLNDNT T KG + + +A
Sbjct: 200 LSEAFRLIGTLEEVHMPQNGINHAGITALAESFKANSLLKVINLNDNTFTEKGGVAMAEA 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
L L + ++N GDCL++S GA +IA L + L+D+NL+ EI + L +++++
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAQAIASALKEGLHKLKDLNLSYCEIKADAAVSLAESVED 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K+ L++++++ N GEEG E+++++++S MA L
Sbjct: 320 KSDLEKLDLNGNCLGEEGCEQVQEILESINMANIL 354
Score = 48 (22.0 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
EE + L+ L L NT+ + A + + L + P L
Sbjct: 46 EEYEGLQALRLEGNTVGVEAAKAIAEVLQRKPDL 79
>MGI|MGI:103071 [details] [associations]
symbol:Rangap1 "RAN GTPase activating protein 1"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005098
"Ran GTPase activator activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0046826 "negative regulation of
protein export from nucleus" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 MGI:MGI:103071 GO:GO:0048471
GO:GO:0007165 GO:GO:0005819 GO:GO:0031965 GO:GO:0046826
GO:GO:0000777 GO:GO:0032853 eggNOG:COG5238 KO:K14319
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
CTD:5905 HOVERGEN:HBG017720 OMA:SFNSNAF OrthoDB:EOG4K0QN7
ChiTaRS:RANGAP1 Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:U08110
EMBL:U20857 EMBL:AK146670 EMBL:AK159009 EMBL:AK159525 EMBL:BC066213
EMBL:BC071200 IPI:IPI00467338 PIR:A36983 PIR:T52070
RefSeq:NP_001139646.1 RefSeq:NP_035371.4 UniGene:Mm.270975 PDB:1KPS
PDBsum:1KPS ProteinModelPortal:P46061 SMR:P46061 DIP:DIP-17024N
IntAct:P46061 STRING:P46061 PhosphoSite:P46061 PaxDb:P46061
PRIDE:P46061 Ensembl:ENSMUST00000052374 Ensembl:ENSMUST00000170134
Ensembl:ENSMUST00000171115 GeneID:19387 KEGG:mmu:19387
InParanoid:Q6NZB5 EvolutionaryTrace:P46061 NextBio:296501
Bgee:P46061 CleanEx:MM_RANGAP1 Genevestigator:P46061
GermOnline:ENSMUSG00000022391 Uniprot:P46061
Length = 589
Score = 561 (202.5 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 118/254 (46%), Positives = 162/254 (63%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+LVELDLSDNAFGP GV G LL+S CF I G K+L+ AL
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C+ S +G PLALKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ AF N LR +NLNDNT T KG + + + L L + ++N GDCL++S GA +IA
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L+++NL+ EI L + +A+ +K +L++++++ N GEEG E+++++M S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 347
Query: 460 FGMAAALV-LEDDE 472
F MA L L DDE
Sbjct: 348 FNMAKVLASLSDDE 361
Score = 313 (115.2 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 65/155 (41%), Positives = 99/155 (63%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F + TLE V MPQNGI H G+TAL+ AF N LR +NLNDNT T KG + + +
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
L L + ++N GDCL++S GA +IA + L+++NL+ EI L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K +L++++++ N GEEG E+++++M SF MA L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 354
Score = 134 (52.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + + G LA F L + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLV 276
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
KGA+ + A+ LP L LNL C +K A +A+ + D LE ++L N + +
Sbjct: 277 RSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEE 336
Query: 421 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEME 454
G L + M + K + ++S+++ GE+ EE E
Sbjct: 337 GCEQLQEVMDSFNMAKVLASLSDDE-GEDEDEEEE 370
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F L + + N G A+++ + +++ +N D + KGA+ + A
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287
Query: 62 L-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ LP L LNL C +K A +A+ + D LE ++L N + +G L + M +
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDS 347
Query: 121 KTKLKQI-NVSENQFGEEGVEEME 143
K + ++S+++ GE+ EE E
Sbjct: 348 FNMAKVLASLSDDE-GEDEDEEEE 370
Score = 60 (26.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV E L+KS
Sbjct: 113 QLVELDLSDNAFGPDGVRGFEALLKS 138
Score = 57 (25.1 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + + LE + L N + V+ + KA++ K++LK+ + S+
Sbjct: 38 AKDVIKEIEEFDGLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSD 86
Score = 41 (19.5 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
EE L L L NT+ + A + +AL K L
Sbjct: 46 EEFDGLEALRLEGNTVGVEAARVIAKALEKKSEL 79
>RGD|1310380 [details] [associations]
symbol:Rangap1 "RAN GTPase activating protein 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR027038 RGD:1310380 eggNOG:COG5238 PANTHER:PTHR24113
HOGENOM:HOG000195026 HOVERGEN:HBG017720 OrthoDB:EOG4K0QN7
IPI:IPI00471774 EMBL:BC082056 UniGene:Rn.107099
ProteinModelPortal:Q66H32 STRING:Q66H32 PRIDE:Q66H32
InParanoid:Q66H32 NextBio:681949 ArrayExpress:Q66H32
Genevestigator:Q66H32 Uniprot:Q66H32
Length = 431
Score = 554 (200.1 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 116/254 (45%), Positives = 161/254 (63%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+LVELDLSDNAFGP GV G LL+S CF I G K+L+ AL
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C+ S +G PL LKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ AF N LR +NLNDNT T KG + + + L L + ++N GDCL++S GA +IA
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L+++NL+ EI L + +A+ +K +L++++++ N GEEG E++++++ S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVLDS 347
Query: 460 FGMAAALV-LEDDE 472
F MA L L DDE
Sbjct: 348 FNMAKVLASLSDDE 361
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 64/155 (41%), Positives = 99/155 (63%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F + TLE V MPQNGI H G+TAL+ AF N LR +NLNDNT T KG + + +
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
L L + ++N GDCL++S GA +IA + L+++NL+ EI L + +A+ +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVAD 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K +L++++++ N GEEG E++++++ SF MA L
Sbjct: 320 KAELEKLDLNGNALGEEGCEQLQEVLDSFNMAKVL 354
Score = 128 (50.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + + G LA F L + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLV 276
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
KGA+ + A+ LP L LNL C +K A +A+ + D LE ++L N + +
Sbjct: 277 RSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEE 336
Query: 421 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEME 454
G L + + + K + ++S+++ GE+ E+ E
Sbjct: 337 GCEQLQEVLDSFNMAKVLASLSDDE-GEDEDEDEE 370
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00044
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F L + + N G A+++ + +++ +N D + KGA+ + A
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287
Query: 62 L-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ LP L LNL C +K A +A+ + D LE ++L N + +G L + + +
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVLDS 347
Query: 121 KTKLKQI-NVSENQFGEEGVEEME 143
K + ++S+++ GE+ E+ E
Sbjct: 348 FNMAKVLASLSDDE-GEDEDEDEE 370
Score = 61 (26.5 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + + LE + L N + V+ + KA++ K+KLK+ + S+
Sbjct: 38 AKDVIKEIEEFDGLEALRLEGNTVGVEAARVIAKALEKKSKLKRCHWSD 86
Score = 60 (26.2 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV E L+KS
Sbjct: 113 QLVELDLSDNAFGPDGVRGFEALLKS 138
Score = 41 (19.5 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
EE L L L NT+ + A + +AL K L
Sbjct: 46 EEFDGLEALRLEGNTVGVEAARVIAKALEKKSKL 79
>UNIPROTKB|F1MAA5 [details] [associations]
symbol:Rangap1 "Protein Rangap1" species:10116 "Rattus
norvegicus" [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471
GO:GO:0007165 GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 IPI:IPI00471774
PRIDE:F1MAA5 Ensembl:ENSRNOT00000052098 Uniprot:F1MAA5
Length = 586
Score = 544 (196.6 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 115/254 (45%), Positives = 159/254 (62%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ GA+LVELDLSDNAFGP GV G LL+S CF I G K+L+ AL
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALT 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C+ S +G PL LKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TA
Sbjct: 168 ECHRKSSAQGKPLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTA 227
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ AF N LR +NLNDNT T KG + + + L L + ++N GDCL++S GA +IA
Sbjct: 228 LAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 287
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L+++NL+ EI L + +A + +L++++++ N GEEG E++++++ S
Sbjct: 288 VRGGLPKLKELNLSFCEIKRDAALVVAEAGADHAELEKLDLNGNALGEEGCEQLQEVLDS 347
Query: 460 FGMAAALV-LEDDE 472
F MA L L DDE
Sbjct: 348 FNMAKVLASLSDDE 361
Score = 300 (110.7 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 63/155 (40%), Positives = 97/155 (62%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F + TLE V MPQNGI H G+TAL+ AF N LR +NLNDNT T KG + + +
Sbjct: 200 LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAET 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
L L + ++N GDCL++S GA +IA + L+++NL+ EI L + +A +
Sbjct: 260 LKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAGAD 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
+L++++++ N GEEG E++++++ SF MA L
Sbjct: 320 HAELEKLDLNGNALGEEGCEQLQEVLDSFNMAKVL 354
Score = 124 (48.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + + G LA F L + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLV 276
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
KGA+ + A+ LP L LNL C +K A +A+ D+ LE ++L N + +
Sbjct: 277 RSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAGADHAELEKLDLNGNALGEE 336
Query: 421 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEME 454
G L + + + K + ++S+++ GE+ E+ E
Sbjct: 337 GCEQLQEVLDSFNMAKVLASLSDDE-GEDEDEDEE 370
Score = 61 (26.5 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + + LE + L N + V+ + KA++ K+KLK+ + S+
Sbjct: 38 AKDVIKEIEEFDGLEALRLEGNTVGVEAARVIAKALEKKSKLKRCHWSD 86
Score = 60 (26.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV E L+KS
Sbjct: 113 QLVELDLSDNAFGPDGVRGFEALLKS 138
Score = 41 (19.5 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
EE L L L NT+ + A + +AL K L
Sbjct: 46 EEFDGLEALRLEGNTVGVEAARVIAKALEKKSKL 79
>ZFIN|ZDB-GENE-060929-492 [details] [associations]
symbol:rangap1a "RAN GTPase activating protein 1a"
species:7955 "Danio rerio" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
ZFIN:ZDB-GENE-060929-492 GO:GO:0007165 GO:GO:0032853 eggNOG:COG5238
KO:K14319 GeneTree:ENSGT00440000039203 GO:GO:0005098
PANTHER:PTHR24113 HOGENOM:HOG000195026 HOVERGEN:HBG017720
OMA:SFNSNAF OrthoDB:EOG4K0QN7 Gene3D:1.25.40.200 SUPFAM:SSF69099
EMBL:CR774195 EMBL:CU633617 EMBL:CU655966 EMBL:BC124540
IPI:IPI00803875 RefSeq:NP_001070084.1 UniGene:Dr.82553 SMR:Q08BV5
STRING:Q08BV5 Ensembl:ENSDART00000088610 GeneID:767677
KEGG:dre:767677 CTD:767677 NextBio:20918068 Uniprot:Q08BV5
Length = 570
Score = 548 (198.0 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 112/251 (44%), Positives = 168/251 (66%)
Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 283
GARL LDLSDNAFGP GV+G+ LL+S+ C I G K+L+ AL +C+
Sbjct: 111 GARLKVLDLSDNAFGPDGVKGIEKLLKSAACHTLQELRLNNCGMGIGGGKILAAALSECH 170
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
+ S G+P LKVFIAGRNRLEN+GA LA F+ + +LE V MPQNGI + G+TAL+
Sbjct: 171 QQSSALGAPFKLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINYPGVTALAT 230
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
A + N LR LNLNDNT T KGA+ + QAL L ++ ++N GDCL++S GAS++A+ + +
Sbjct: 231 AMQHNPQLRVLNLNDNTFTKKGAMAMAQALKHLRNVQVINFGDCLVRSEGASALAETVRE 290
Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
L+++NL+ EI + L++ +++++K + ++++++ N GE+G + +++LM+S M
Sbjct: 291 GLPILKELNLSFGEIMEEAALEVAQSVQHKDQFEKLDLNGNSLGEDGCKSLKQLMESINM 350
Query: 463 AAAL-VLEDDE 472
A L L DDE
Sbjct: 351 ADKLGSLSDDE 361
Score = 322 (118.4 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 62/155 (40%), Positives = 108/155 (69%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F+ + +LE V MPQNGI + G+TAL+ A + N +LR LNLNDNT T KGA+ + QA
Sbjct: 200 LAQAFQLMGSLEEVHMPQNGINYPGVTALATAMQHNPQLRVLNLNDNTFTKKGAMAMAQA 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
L L ++ ++N GDCL++S GAS++A+ + + L+++NL+ EI + L++ +++++
Sbjct: 260 LKHLRNVQVINFGDCLVRSEGASALAETVREGLPILKELNLSFGEIMEEAALEVAQSVQH 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K + ++++++ N GE+G + +++LM+S MA L
Sbjct: 320 KDQFEKLDLNGNSLGEDGCKSLKQLMESINMADKL 354
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 34/125 (27%), Positives = 60/125 (48%)
Query: 19 QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
+N + + G TAL+ AF+ L +++ N I Y G L A+ P L +LNL D
Sbjct: 189 RNRLENDGATALAQAFQLMGSLEEVHMPQNGINYPGVTALATAMQHNPQLRVLNLNDNTF 248
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEE 137
GA ++A+ L ++ +N + +G L + ++ LK++N+S + EE
Sbjct: 249 TKKGAMAMAQALKHLRNVQVINFGDCLVRSEGASALAETVREGLPILKELNLSFGEIMEE 308
Query: 138 GVEEM 142
E+
Sbjct: 309 AALEV 313
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 32/152 (21%), Positives = 63/152 (41%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
+N + G LA + L + + N G A++ A + +N++ +N D +
Sbjct: 217 QNGINYPGVTALATAMQHNPQLRVLNLNDNTFTKKGAMAMAQALKHLRNVQVINFGDCLV 276
Query: 362 TYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
+GA L + + + LP L LNL + A +A+ + E ++L N +
Sbjct: 277 RSEGASALAETVREGLPILKELNLSFGEIMEEAALEVAQSVQHKDQFEKLDLNGNSLGED 336
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
G L + M++ ++ + GE +E
Sbjct: 337 GCKSLKQLMESINMADKLGSLSDDEGEPEDDE 368
Score = 72 (30.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+LK +++S+N FG +GV+ +EKL+KS
Sbjct: 113 RLKVLDLSDNAFGPDGVKGIEKLLKS 138
Score = 48 (22.0 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 78 LKSAGASSI---AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
LK A S+ K + + L + L N I V+ + KA++NK+ L+ + S+
Sbjct: 30 LKLDNAQSVEQMVKEIGEFEGLRALRLEGNTIGVEAAQTIAKALENKSDLQCCHWSDMFT 89
Query: 135 GEEGVEEMEKLMKSFGMAAAL 155
G E L+ S G A L
Sbjct: 90 GRLRAEIPPALV-SLGDALIL 109
Score = 42 (19.8 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 75
E + LR L L NTI + A + +AL L + D
Sbjct: 47 EFEGLRALRLEGNTIGVEAAQTIAKALENKSDLQCCHWSD 86
>WB|WBGene00004303 [details] [associations]
symbol:ran-2 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
InterPro:IPR027038 GO:GO:0005634 GO:GO:0009792 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0005096 GO:GO:0043547
GO:GO:0000003 EMBL:FO080706 eggNOG:COG5238 KO:K14319
GeneTree:ENSGT00440000039203 PANTHER:PTHR24113 PIR:S44770
RefSeq:NP_741232.1 RefSeq:NP_741233.2 ProteinModelPortal:P34342
SMR:P34342 IntAct:P34342 STRING:P34342 PaxDb:P34342 PRIDE:P34342
EnsemblMetazoa:C29E4.3a GeneID:176115 KEGG:cel:CELE_C29E4.3
UCSC:C29E4.3a CTD:176115 WormBase:C29E4.3a WormBase:C29E4.3b
HOGENOM:HOG000019607 InParanoid:P34342 OMA:NNIVAQC NextBio:891178
Uniprot:P34342
Length = 960
Score = 396 (144.5 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 97/235 (41%), Positives = 132/235 (56%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ G ++ ELDLSDNAFGPIG + L DLL S F+ I G K ++K+L
Sbjct: 535 MTAGCKIKELDLSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLGIGG-KQIAKSLT 593
Query: 281 DCYESSKKEGSP--LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
+C S G L LK FIAGRNRLEN GA LAA FK L+T+E ++ QNGI+ GI
Sbjct: 594 ECLRKSIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQNGIHEEGI 653
Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
AL A + N+NLR+L L DNT+ KGA L + L P L +LNL DCL++ AG + I
Sbjct: 654 RALVAALKHNRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLSDCLIRDAGCNYII 713
Query: 399 KYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKN---KTKLKQINVSENQFGEE 448
+L + L++V L NE++ L++ T +++ N FG+E
Sbjct: 714 DHLNPQHHRHLKNVYLCGNELTPPVAKLLIQKWSKFDGLTPKPVLHIHTNSFGDE 768
Score = 351 (128.6 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 88/230 (38%), Positives = 128/230 (55%)
Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDC 282
+G RL LDLSDNAFG L + L+S ++ + G K + KAL
Sbjct: 131 SGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALYSLENLILNNNGLGLAG-KTVGKALCSL 189
Query: 283 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 342
++SKK G+PL LK F+ GRNRLE E L+ F KL TLE + +PQNGI GI AL+
Sbjct: 190 IDASKKAGTPLKLKKFVCGRNRLEVESTIALSDAFIKLGTLEEIRLPQNGIRDDGIIALA 249
Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
+AF NK LR +++NDN +GAI + + LS L + +L+LGDC+ G +I L
Sbjct: 250 EAFRMNKKLRIIDINDNFCCPEGAIQISEVLSDLQFIEVLDLGDCVCDDPGVLAIIAELD 309
Query: 403 --DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL--KQINVSENQFGEE 448
+ L+ V L+ N I+ +D + A N K+ ++++S N FG++
Sbjct: 310 KINRDCLKKVVLSGNNIT-SDVIDEIGACFNSPKMCHVKVDISVNMFGKD 358
Score = 215 (80.7 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 53/140 (37%), Positives = 82/140 (58%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L+ F KL TLE + +PQNGI GI AL++AF NKKLR +++NDN +GAI + +
Sbjct: 220 LSDAFIKLGTLEEIRLPQNGIRDDGIIALAEAFRMNKKLRIIDINDNFCCPEGAIQISEV 279
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
LS L + +L+LGDC+ G +I L + L+ V L+ N I+ +D + A
Sbjct: 280 LSDLQFIEVLDLGDCVCDDPGVLAIIAELDKINRDCLKKVVLSGNNIT-SDVIDEIGACF 338
Query: 120 NKTKL--KQINVSENQFGEE 137
N K+ ++++S N FG++
Sbjct: 339 NSPKMCHVKVDISVNMFGKD 358
Score = 214 (80.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 53/141 (37%), Positives = 79/141 (56%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LAA FK L+T+E ++ QNGI+ GI AL A + N+ LR+L L DNT+ KGA L +
Sbjct: 628 LAATFKALETVEWFDVRQNGIHEEGIRALVAALKHNRNLRYLWLEDNTVLPKGAKALAKT 687
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
L P L +LNL DCL++ AG + I +L + L++V L NE++ L++
Sbjct: 688 LESWPKLEVLNLSDCLIRDAGCNYIIDHLNPQHHRHLKNVYLCGNELTPPVAKLLIQKWS 747
Query: 120 N---KTKLKQINVSENQFGEE 137
T +++ N FG+E
Sbjct: 748 KFDGLTPKPVLHIHTNSFGDE 768
Score = 94 (38.1 bits), Expect = 8.1e-43, Sum P(2) = 8.1e-43
Identities = 32/116 (27%), Positives = 55/116 (47%)
Query: 29 ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
ALSDAF + L + L N I G I L +A L I+++ D GA I++
Sbjct: 219 ALSDAFIKLGTLEEIRLPQNGIRDDGIIALAEAFRMNKKLRIIDINDNFCCPEGAIQISE 278
Query: 89 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK--NKTKLKQINVSENQFGEEGVEEM 142
L+D +E ++L G L ++ + N+ LK++ +S N + ++E+
Sbjct: 279 VLSDLQFIEVLDLGDCVCDDPGVLAIIAELDKINRDCLKKVVLSGNNITSDVIDEI 334
Score = 91 (37.1 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 48/181 (26%), Positives = 81/181 (44%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN--LRHLNLNDNTIT 362
LE G M+ A K ++ +++ N +G AL D E + L L LN+N +
Sbjct: 527 LEALGKAMMTAGCK----IKELDLSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLG 582
Query: 363 YKG---AIPLGQALSKLPSLAI-----LNL-----GDCLLKSAGASSIAKYLTDNTTLED 409
G A L + L K S+A+ L L G L++ GA ++A T+E
Sbjct: 583 IGGKQIAKSLTECLRK--SIAVGGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEW 640
Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
++ N I +G LV A+K+ L+ + + +N +G + + K ++S+ L L
Sbjct: 641 FDVRQNGIHEEGIRALVAALKHNRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLS 700
Query: 470 D 470
D
Sbjct: 701 D 701
Score = 71 (30.1 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 51 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV---NLTCNEIS 107
T + A P+ + ++ S+ L L L A + IAK L + LE +L +
Sbjct: 461 TAESAEPVVKVIAAASSMKALELRGNTLGIAAGNVIAKALESHPELERCLWSDLFTGRLK 520
Query: 108 --VQGGLD-LVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKS 148
+ L+ L KAM K+K++++S+N FG G + ++ L++S
Sbjct: 521 NEIPPILEALGKAMMTAGCKIKELDLSDNAFGPIGADALKDLLES 565
Score = 71 (30.1 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV---NLTCNEIS 418
T + A P+ + ++ S+ L L L A + IAK L + LE +L +
Sbjct: 461 TAESAEPVVKVIAAASSMKALELRGNTLGIAAGNVIAKALESHPELERCLWSDLFTGRLK 520
Query: 419 --VQGGLD-LVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L+ L KAM K+K++++S+N FG G + ++ L++S
Sbjct: 521 NEIPPILEALGKAMMTAGCKIKELDLSDNAFGPIGADALKDLLES 565
Score = 65 (27.9 bits), Expect = 9.0e-40, Sum P(2) = 9.0e-40
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 95 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 154
TLE++ L N I G + L +A + KL+ I++++N EG ++ +++
Sbjct: 229 TLEEIRLPQNGIRDDGIIALAEAFRMNKKLRIIDINDNFCCPEGAIQISEVLSDLQFIEV 288
Query: 155 LVL 157
L L
Sbjct: 289 LDL 291
Score = 64 (27.6 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 28/140 (20%), Positives = 61/140 (43%)
Query: 9 LKTLEHVEMPQNGIYHVGIT---ALSDAFEENKK------LRHLNLNDNTITYKGAIPLG 59
L +LE++ + NG+ G T AL + +KK L+ N + + I L
Sbjct: 162 LYSLENLILNNNGLGLAGKTVGKALCSLIDASKKAGTPLKLKKFVCGRNRLEVESTIALS 221
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
A KL +L + L ++ G ++A+ N L +++ N +G + + + +
Sbjct: 222 DAFIKLGTLEEIRLPQNGIRDDGIIALAEAFRMNKKLRIIDINDNFCCPEGAIQISEVLS 281
Query: 120 NKTKLKQINVSENQFGEEGV 139
+ ++ +++ + + GV
Sbjct: 282 DLQFIEVLDLGDCVCDDPGV 301
Score = 62 (26.9 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 38/172 (22%), Positives = 67/172 (38%)
Query: 304 RLENEGAKMLAAVFKKLKT----LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
RL+NE +L A+ K + T ++ +++ N +G AL D E + +L
Sbjct: 518 RLKNEIPPILEALGKAMMTAGCKIKELDLSDNAFGPIGADALKDLLESPSSF---SLEVL 574
Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
+ G G+ ++K +L +CL KS + L+ N +
Sbjct: 575 KLNNNGLGIGGKQIAK-------SLTECLRKSIAVGG-----ENRLRLKTFIAGRNRLEN 622
Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
G L K ++ +V +N EEG+ + +K L LED+
Sbjct: 623 PGAHALAATFKALETVEWFDVRQNGIHEEGIRALVAALKHNRNLRYLWLEDN 674
Score = 48 (22.0 bits), Expect = 5.5e-38, Sum P(2) = 5.5e-38
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 84 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
S + + + LE ++ N +SV G + +++K + +LK+ + + F +E+
Sbjct: 60 SKVIDQIRKHLNLEVLDFRGNTLSVLAGKLIAESLKTRRELKEC-IWSDMFTGRLKDEIP 118
Query: 144 KLMKSFGMA 152
++ + G A
Sbjct: 119 LVLDALGEA 127
Score = 44 (20.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 13/70 (18%), Positives = 35/70 (50%)
Query: 394 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
A + K + ++++ + L N + + G + KA+++ +L++ S+ F E+
Sbjct: 465 AEPVVKVIAAASSMKALELRGNTLGIAAGNVIAKALESHPELERCLWSD-LFTGRLKNEI 523
Query: 454 EKLMKSFGMA 463
++++ G A
Sbjct: 524 PPILEALGKA 533
>ZFIN|ZDB-GENE-040426-1921 [details] [associations]
symbol:rangap1b "Ran GTPase activating protein 1b"
species:7955 "Danio rerio" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
ZFIN:ZDB-GENE-040426-1921 GO:GO:0007165 GO:GO:0032853 HSSP:P41391
GO:GO:0005098 PANTHER:PTHR24113 HOGENOM:HOG000195026
HOVERGEN:HBG017720 Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:BC054654
IPI:IPI00505852 RefSeq:NP_998154.1 UniGene:Dr.77291
ProteinModelPortal:Q7SYN0 STRING:Q7SYN0 PRIDE:Q7SYN0 GeneID:568424
KEGG:dre:568424 CTD:568424 NextBio:20889164 ArrayExpress:Q7SYN0
Bgee:Q7SYN0 Uniprot:Q7SYN0
Length = 577
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 116/254 (45%), Positives = 161/254 (63%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+ +GARL +LDLSDNAFGP GV+G+ +LL+SS C+ G +L+ AL
Sbjct: 108 MTSGARLTQLDLSDNAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASALT 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C++ S SPL LKVFIAGRNRLEN+GA LA FK L +LE V MPQNGI H GITA
Sbjct: 168 ECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFKLLGSLEEVHMPQNGINHPGITA 227
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L+ A + N NL+ LNLNDNT T KG+ + +A+ L L +N GDCL++S GA +IA
Sbjct: 228 LAAALKHNPNLQVLNLNDNTFTTKGSKAMAEAIRNLQCLKAINFGDCLVRSEGAIAIAGA 287
Query: 401 LTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
L + L ++NL+ EI + + KA++ K L++++++ N FGE+G E +++ M+
Sbjct: 288 LREGLHLLRELNLSFGEICEAAAMVVAKAVQGKADLEKLDLNGNCFGEDGCEALKEAMEK 347
Query: 460 FGMAAALV-LEDDE 472
M L L DDE
Sbjct: 348 MNMEDLLCSLSDDE 361
Score = 300 (110.7 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 64/151 (42%), Positives = 95/151 (62%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA FK L +LE V MPQNGI H GITAL+ A + N L+ LNLNDNT T KG+ + +A
Sbjct: 200 LAKAFKLLGSLEEVHMPQNGINHPGITALAAALKHNPNLQVLNLNDNTFTTKGSKAMAEA 259
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
+ L L +N GDCL++S GA +IA L + L ++NL+ EI + + KA++
Sbjct: 260 IRNLQCLKAINFGDCLVRSEGAIAIAGALREGLHLLRELNLSFGEICEAAAMVVAKAVQG 319
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
K L++++++ N FGE+G E +++ M+ M
Sbjct: 320 KADLEKLDLNGNCFGEDGCEALKEAMEKMNM 350
>FB|FBgn0003346 [details] [associations]
symbol:RanGAP "Ran GTPase activating protein" species:7227
"Drosophila melanogaster" [GO:0005098 "Ran GTPase activator
activity" evidence=IDA;NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0006913 "nucleocytoplasmic transport" evidence=NAS] [GO:0045132
"meiotic chromosome segregation" evidence=TAS] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR027038 GO:GO:0005737
EMBL:AE014134 GO:GO:0022008 GO:GO:0006913 GO:GO:0045132
eggNOG:COG5238 KO:K14319 EMBL:AF143860 EMBL:AY061219
RefSeq:NP_476712.1 UniGene:Dm.3220 ProteinModelPortal:Q9VIW3
SMR:Q9VIW3 DIP:DIP-23850N IntAct:Q9VIW3 MINT:MINT-885779
STRING:Q9VIW3 PaxDb:Q9VIW3 PRIDE:Q9VIW3 EnsemblMetazoa:FBtr0081234
GeneID:35223 KEGG:dme:Dmel_CG9999 CTD:35223 FlyBase:FBgn0003346
GeneTree:ENSGT00440000039203 InParanoid:Q9VIW3 OMA:AEETAYV
OrthoDB:EOG4V15GM PhylomeDB:Q9VIW3 ChiTaRS:SD GenomeRNAi:35223
NextBio:792463 Bgee:Q9VIW3 GermOnline:CG9999 GO:GO:0005098
PANTHER:PTHR24113 Uniprot:Q9VIW3
Length = 596
Score = 496 (179.7 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 110/244 (45%), Positives = 150/244 (61%)
Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 283
GA+L LDLSDNA GP G+ GL +LLRS C++ G +LS+AL D +
Sbjct: 107 GAKLTVLDLSDNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLH 166
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
++ K G PL L+VFI RNRLE+ GA +A F+ LKT E + + QN IY G+ AL++
Sbjct: 167 ANANKAGFPLQLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAE 226
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT- 402
+F+ N +LR LN+NDNT+ +GA + +AL LP L ++ GDCL+K+ GA + L
Sbjct: 227 SFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALER 286
Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 462
N LE ++L NEI+ GGL LV AM NK KL+ +N+ N FGEEG E++ M
Sbjct: 287 GNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLPT 346
Query: 463 AAAL 466
AAAL
Sbjct: 347 AAAL 350
Score = 310 (114.2 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 69/155 (44%), Positives = 96/155 (61%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A F+ LKT E + + QN IY G+ AL+++F+ N LR LN+NDNT+ +GA + +A
Sbjct: 196 MATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEA 255
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L LP L ++ GDCL+K+ GA + L N LE ++L NEI+ GGL LV AM N
Sbjct: 256 LPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGN 315
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
K KL+ +N+ N FGEEG E++ M AAAL
Sbjct: 316 KPKLRILNLDGNSFGEEGSEKIISEMSKLPTAAAL 350
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 19 QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
+N + G T ++ AF+ K + L N+I +G L ++ P L +LN+ D L
Sbjct: 185 RNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTL 244
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEE 137
KS GA IA+ L L +++ I G +A+ + +L+ I++ N+ +
Sbjct: 245 KSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSD 304
Query: 138 G 138
G
Sbjct: 305 G 305
Score = 103 (41.3 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 39/162 (24%), Positives = 68/162 (41%)
Query: 295 LKVF---IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
LK F + +N + EG + LA FK L + M N + G +++A L
Sbjct: 203 LKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLL 262
Query: 352 RHLNLNDNTITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
R ++ D I GA G+AL + L +++LG + S G + + + L +
Sbjct: 263 REMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRIL 322
Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
NL N +G ++ M + ++Q EE +E+
Sbjct: 323 NLDGNSFGEEGSEKIISEMSKLPTAAALQPFQHQ-EEEDLED 363
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 42/158 (26%), Positives = 69/158 (43%)
Query: 4 AVFKKLKTLEHV-EMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
A++K + T + E+P+ + H+G AL A KL L+L+DN + G L + L
Sbjct: 78 ALWKNMFTGRLISEIPE-ALKHLG-AALIVA---GAKLTVLDLSDNALGPNGMRGLEELL 132
Query: 63 SKLP---SLAILNLGDCLLKSAGASSIAKYLTD---NTTLEDVNLTC-------NEISVQ 109
+ P SL L L +C L G S +++ L D N L N +
Sbjct: 133 -RSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRNRLEDA 191
Query: 110 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
G ++ A + ++I + +N EGVE + + K
Sbjct: 192 GATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAESFK 229
Score = 58 (25.5 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 17/78 (21%), Positives = 37/78 (47%)
Query: 80 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
+A + L TT+ +NL N + V+ + + +K + ++ + +N F +
Sbjct: 31 AADVQDVVDALNKQTTVHYLNLDGNTLGVEAAKAIGEGLKRHPEFRKA-LWKNMFTGRLI 89
Query: 140 EEMEKLMKSFGMAAALVL 157
E+ + +K G AAL++
Sbjct: 90 SEIPEALKHLG--AALIV 105
Score = 57 (25.1 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 32 DAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
DA + + +LNL+ NT+ + A +G+ L + P
Sbjct: 39 DALNKQTTVHYLNLDGNTLGVEAAKAIGEGLKRHP 73
Score = 51 (23.0 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
KL +++S+N G G+ +E+L++S
Sbjct: 109 KLTVLDLSDNALGPNGMRGLEELLRS 134
>UNIPROTKB|F8W7I9 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 EMBL:AL035681 GO:GO:0032853 GO:GO:0005098
PANTHER:PTHR24113 HGNC:HGNC:9854 ChiTaRS:RANGAP1 Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:AL035659 IPI:IPI00879681
ProteinModelPortal:F8W7I9 SMR:F8W7I9 PRIDE:F8W7I9
Ensembl:ENST00000407260 UCSC:uc011aoz.2 ArrayExpress:F8W7I9
Bgee:F8W7I9 Uniprot:F8W7I9
Length = 532
Score = 326 (119.8 bits), Expect = 3.8e-36, Sum P(3) = 3.8e-36
Identities = 68/157 (43%), Positives = 102/157 (64%)
Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
K + TLE V MPQNGI H GITAL+ AF N LR +NLNDNT T KGA+ + + L L
Sbjct: 150 KVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 209
Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
+ ++N GDCL++S GA +IA + L+++NL+ EI L + +AM +K +L+
Sbjct: 210 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 269
Query: 437 QINVSENQFGEEGVEEMEKLMKSFGMAAALV-LEDDE 472
+++++ N GEEG E+++++++ F MA L L DDE
Sbjct: 270 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDE 306
Score = 315 (115.9 bits), Expect = 9.7e-28, P = 9.7e-28
Identities = 64/150 (42%), Positives = 98/150 (65%)
Query: 7 KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
K + TLE V MPQNGI H GITAL+ AF N LR +NLNDNT T KGA+ + + L L
Sbjct: 150 KVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 209
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
+ ++N GDCL++S GA +IA + L+++NL+ EI L + +AM +K +L+
Sbjct: 210 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 269
Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
+++++ N GEEG E+++++++ F MA L
Sbjct: 270 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 299
Score = 171 (65.3 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 67/247 (27%), Positives = 105/247 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLS--KA 278
+ GA+LVELDLSDNAFGP GV+G LL+SS CF I G K++ +
Sbjct: 98 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKVIGTLEE 157
Query: 279 LHDCYESSKKEG-SPLA--------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
+H G + LA L+V N +GA +A K L+ +E +
Sbjct: 158 VHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFG 217
Query: 330 QNGIYHVGITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
+ G A++DA L+ LNL+ I A+ + +A++ L L+L
Sbjct: 218 DCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNT 277
Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE 448
L G + + LE N+ S+ D + + + + ++ E + EE
Sbjct: 278 LGEEGCEQLQE------VLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEAEEEEEEDEEE 331
Query: 449 GVEEMEK 455
EE E+
Sbjct: 332 EEEEEEE 338
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F L + + N G A+++ + +++ +N D + KGA+ + A
Sbjct: 173 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 232
Query: 62 L-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK- 119
+ LP L LNL C +K A ++A+ + D LE ++L N + +G L + ++
Sbjct: 233 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEG 292
Query: 120 -NKTK-LKQINVSENQFGEEGVEEMEK 144
N K L ++ E++ EE EE E+
Sbjct: 293 FNMAKVLASLSDDEDEEEEEEGEEEEE 319
Score = 62 (26.9 bits), Expect = 3.8e-36, Sum P(3) = 3.8e-36
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV+ E L+KS
Sbjct: 103 QLVELDLSDNAFGPDGVQGFEALLKS 128
Score = 61 (26.5 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
+ + K + D +LE + L N + V+ + KA++ K++LK+ + S+
Sbjct: 28 SKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSD 76
Score = 40 (19.1 bits), Expect = 3.8e-36, Sum P(3) = 3.8e-36
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
E+ L L L NT+ + A + +AL K L
Sbjct: 36 EDFDSLEALRLEGNTVGVEAARVIAKALEKKSEL 69
>UNIPROTKB|H0Y4Q3 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 GO:GO:0007165
EMBL:AL035681 GO:GO:0032853 GO:GO:0005098 PANTHER:PTHR24113
HGNC:HGNC:9854 ChiTaRS:RANGAP1 Gene3D:1.25.40.200 EMBL:AL035659
ProteinModelPortal:H0Y4Q3 PRIDE:H0Y4Q3 Ensembl:ENST00000446258
Bgee:H0Y4Q3 Uniprot:H0Y4Q3
Length = 253
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 64/150 (42%), Positives = 98/150 (65%)
Query: 7 KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
K + TLE V MPQNGI H GITAL+ AF N LR +NLNDNT T KGA+ + + L L
Sbjct: 101 KVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 160
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
+ ++N GDCL++S GA +IA + L+++NL+ EI L + +AM +K +L+
Sbjct: 161 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 220
Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
+++++ N GEEG E+++++++ F MA L
Sbjct: 221 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 250
Score = 314 (115.6 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 64/150 (42%), Positives = 98/150 (65%)
Query: 318 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 377
K + TLE V MPQNGI H GITAL+ AF N LR +NLNDNT T KGA+ + + L L
Sbjct: 101 KVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 160
Query: 378 SLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
+ ++N GDCL++S GA +IA + L+++NL+ EI L + +AM +K +L+
Sbjct: 161 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 220
Query: 437 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 466
+++++ N GEEG E+++++++ F MA L
Sbjct: 221 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 250
Score = 168 (64.2 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 57/193 (29%), Positives = 85/193 (44%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLS--KA 278
+ GA+LVELDLSDNAFGP GV+G LL+SS CF I G K++ +
Sbjct: 49 ITAGAQLVELDLSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKVIGTLEE 108
Query: 279 LHDCYESSKKEG-SPLA--------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
+H G + LA L+V N +GA +A K L+ +E +
Sbjct: 109 VHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFG 168
Query: 330 QNGIYHVGITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 388
+ G A++DA L+ LNL+ I A+ + +A++ L L+L
Sbjct: 169 DCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNT 228
Query: 389 LKSAGASSIAKYL 401
L G + + L
Sbjct: 229 LGEEGCEQLQEVL 241
Score = 117 (46.2 bits), Expect = 0.00020, P = 0.00020
Identities = 29/110 (26%), Positives = 52/110 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA F L + + N G A+++ + +++ +N D + KGA+ + A
Sbjct: 124 LAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADA 183
Query: 62 L-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
+ LP L LNL C +K A ++A+ + D LE ++L N + +G
Sbjct: 184 IRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEG 233
Score = 62 (26.9 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
+L ++++S+N FG +GV+ E L+KS
Sbjct: 54 QLVELDLSDNAFGPDGVQGFEALLKS 79
Score = 38 (18.4 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 106 ISVQGGLDLVKAMKNKTKLKQINVSE 131
+ V+ + KA++ K++LK+ + S+
Sbjct: 2 VGVEAARVIAKALEKKSELKRCHWSD 27
>UNIPROTKB|Q7RTR2 [details] [associations]
symbol:NLRC3 "Protein NLRC3" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007249 "I-kappaB kinase/NF-kappaB cascade"
evidence=IDA] [GO:0042110 "T cell activation" evidence=IEP]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0005524 GO:GO:0005737 GO:GO:0042110
GO:GO:0032088 GO:GO:0007249 InterPro:IPR007111 PROSITE:PS50837
EMBL:BK001112 EMBL:AY601811 EMBL:AK090431 EMBL:AK074109
EMBL:AF501291 EMBL:AF501292 IPI:IPI00333975 IPI:IPI00385743
IPI:IPI00854580 IPI:IPI00854840 RefSeq:NP_849172.2
UniGene:Hs.592091 ProteinModelPortal:Q7RTR2 SMR:Q7RTR2
STRING:Q7RTR2 PhosphoSite:Q7RTR2 DMDM:158563940 PaxDb:Q7RTR2
PRIDE:Q7RTR2 Ensembl:ENST00000301749 GeneID:197358 KEGG:hsa:197358
UCSC:uc010btn.3 CTD:197358 GeneCards:GC16M003592 HGNC:HGNC:29889
neXtProt:NX_Q7RTR2 PharmGKB:PA162397626 eggNOG:NOG69209
HOGENOM:HOG000108875 HOVERGEN:HBG055285 InParanoid:Q7RTR2
GenomeRNAi:197358 NextBio:89661 ArrayExpress:Q7RTR2 Bgee:Q7RTR2
CleanEx:HS_NLRC3 Genevestigator:Q7RTR2 Uniprot:Q7RTR2
Length = 1065
Score = 195 (73.7 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 67/231 (29%), Positives = 104/231 (45%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXIT--GCKLLSKA 278
LK L LDL N+ GV L L C I+ G + ++ A
Sbjct: 802 LKVNQGLESLDLQSNSISDAGVAALMGAL----CTNQTLLSLSLRENSISPEGAQAIAHA 857
Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
L C S+ K L L N L ++GA+ +A ++ +TL + + N I
Sbjct: 858 L--CANSTLKN---LDLTA-----NLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAA 907
Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 398
AL A + N++L L+L +N I GA + +AL +L L L + ++GA +
Sbjct: 908 QALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLG 967
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
+ L N TLE ++L N I V G L A+K + L+++N+ EN G +G
Sbjct: 968 EALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDG 1018
Score = 193 (73.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 70/259 (27%), Positives = 110/259 (42%)
Query: 227 LVELDLSDNAFGPIGVEGLADLL---RSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 283
L LDL N+ GP G + LAD L R+ + L S
Sbjct: 696 LTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSML 755
Query: 284 ESSKKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
K P+ +LK + N + + GAK LA K + LE +++
Sbjct: 756 HLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQS 815
Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
N I G+ AL A N+ L L+L +N+I+ +GA + AL +L L+L LL
Sbjct: 816 NSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLH 875
Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
GA +IA + +N TL ++L N I L +A++ L +++ EN G++G
Sbjct: 876 DQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGA 935
Query: 451 EEMEKLMKSFGMAAALVLE 469
+ + +K AL L+
Sbjct: 936 CAVARALKVNTALTALYLQ 954
Score = 177 (67.4 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
K+ +A N++ N+GAK LA ++L +++ N I G AL+DA + N+ L L+
Sbjct: 670 KISLA-ENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLS 728
Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
L NT+ GA + +AL+ +L++L+L + GA +A L N +L+++ + N
Sbjct: 729 LQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSN 788
Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
I G L +A+K L+ +++ N + GV
Sbjct: 789 SIGDGGAKALAEALKVNQGLESLDLQSNSISDAGV 823
Score = 166 (63.5 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N+ ++ ++L +V K ++++ + +N I + G AL+ + N++L L+L N+I
Sbjct: 647 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 706
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
+GA L AL +L L+L ++ GA S+A+ L N TL ++L N I G
Sbjct: 707 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 766
Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+ A+K LK++ S N G+ G + + + +K
Sbjct: 767 AQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALK 803
Score = 162 (62.1 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 57/239 (23%), Positives = 109/239 (45%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L T L+ L L +N+ P G + +A L ++ G + ++ A+
Sbjct: 830 LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQ--GARAIAVAVR 887
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+ + + L L+ N ++ A+ L + ++L +++ +N I G A
Sbjct: 888 E-----NRTLTSLHLQW-----NFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACA 937
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
++ A + N L L L +I GA LG+AL+ +L IL+L + AGA ++A
Sbjct: 938 VARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANA 997
Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
L N++L +NL N + + G + + A+ +L+ IN+ N G+ G + + +K+
Sbjct: 998 LKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1056
Score = 162 (62.1 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA K + LE +++ N I G+ AL A N+ L L+L +N+I+ +GA + A
Sbjct: 798 LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 857
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L +L L+L LL GA +IA + +N TL ++L N I L +A++
Sbjct: 858 LCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 917
Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
L +++ EN G++G + + +K AL L
Sbjct: 918 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYL 953
Score = 162 (62.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 69/269 (25%), Positives = 112/269 (41%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + L L L N+ GP+G + +AD L+ + G K L++AL
Sbjct: 746 LASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDG--GAKALAEALK 803
Query: 281 --------DCYESSKKEGSPLALKVFIAGRNRL------EN----EGAKMLAAVFKKLKT 322
D +S + AL + L EN EGA+ +A T
Sbjct: 804 VNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANST 863
Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 382
L+ +++ N ++ G A++ A EN+ L L+L N I A LGQAL SL L
Sbjct: 864 LKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSL 923
Query: 383 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
+L + + GA ++A+ L NT L + L I G L +A+ L+ +++
Sbjct: 924 DLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRG 983
Query: 443 NQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
N G G + + +K L L+++
Sbjct: 984 NAIGVAGAKALANALKVNSSLRRLNLQEN 1012
Score = 160 (61.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A ++ +TL + + N I AL A + N+ L L+L +N I GA + +A
Sbjct: 882 IAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARA 941
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L +L L L + ++GA + + L N TLE ++L N I V G L A+K
Sbjct: 942 LKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVN 1001
Query: 122 TKLKQINVSENQFGEEG 138
+ L+++N+ EN G +G
Sbjct: 1002 SSLRRLNLQENSLGMDG 1018
Score = 157 (60.3 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
++ + + +N I + G AL+ + N+ L L+L N+I +GA L AL +L L
Sbjct: 668 IQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSL 727
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
+L ++ GA S+A+ L N TL ++L N I G + A+K LK++ S
Sbjct: 728 SLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSS 787
Query: 132 NQFGEEGVEEMEKLMK 147
N G+ G + + + +K
Sbjct: 788 NSIGDGGAKALAEALK 803
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/139 (28%), Positives = 73/139 (52%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
++L +++ +N I G A++ A + N L L L +I GA LG+AL+ +L
Sbjct: 918 RSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLE 977
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
IL+L + AGA ++A L N++L +NL N + + G + + A+ +L+ IN+
Sbjct: 978 ILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINL 1037
Query: 130 SENQFGEEGVEEMEKLMKS 148
N G+ G + + +K+
Sbjct: 1038 QGNHIGDSGARMISEAIKT 1056
Score = 145 (56.1 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 37/130 (28%), Positives = 68/130 (52%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
++L +++ N I G AL+DA + N+ L L+L NT+ GA + +AL+ +L+
Sbjct: 694 RSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
+L+L + GA +A L N +L+++ + N I G L +A+K L+ +++
Sbjct: 754 MLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDL 813
Query: 130 SENQFGEEGV 139
N + GV
Sbjct: 814 QSNSISDAGV 823
Score = 144 (55.7 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 37/137 (27%), Positives = 69/137 (50%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A +TL + + +N I +G ++DA ++N+ L+ L + N+I GA L +A
Sbjct: 742 MAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEA 801
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L L L+L + AG +++ L N TL ++L N IS +G + A+
Sbjct: 802 LKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCAN 861
Query: 122 TKLKQINVSENQFGEEG 138
+ LK ++++ N ++G
Sbjct: 862 STLKNLDLTANLLHDQG 878
Score = 140 (54.3 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/140 (28%), Positives = 72/140 (51%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A K+ ++L+ + N I G AL++A + N+ L L+L N+I+ G L A
Sbjct: 770 MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGA 829
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L +L L+L + + GA +IA L N+TL++++LT N + QG + A++
Sbjct: 830 LCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVREN 889
Query: 122 TKLKQINVSENQFGEEGVEE 141
L +++ N F + G +
Sbjct: 890 RTLTSLHLQWN-FIQAGAAQ 908
Score = 135 (52.6 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 40/139 (28%), Positives = 65/139 (46%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA K +TL + + N + G ++++A N+ L L+L N+I GA + A
Sbjct: 714 LADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADA 773
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + SL L + GA ++A+ L N LE ++L N IS G L+ A+
Sbjct: 774 LKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTN 833
Query: 122 TKLKQINVSENQFGEEGVE 140
L +++ EN EG +
Sbjct: 834 QTLLSLSLRENSISPEGAQ 852
Score = 134 (52.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 40/137 (29%), Positives = 67/137 (48%)
Query: 11 TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
TL+++++ N ++ G A++ A EN+ L L+L N I A LGQAL SL
Sbjct: 863 TLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTS 922
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
L+L + + GA ++A+ L NT L + L I G L +A+ L+ +++
Sbjct: 923 LDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLR 982
Query: 131 ENQFGEEGVEEMEKLMK 147
N G G + + +K
Sbjct: 983 GNAIGVAGAKALANALK 999
Score = 119 (46.9 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIP 368
GA++L +TLE +++ N I G AL++A + N +LR LNL +N++ GAI
Sbjct: 962 GAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAIC 1021
Query: 369 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
+ ALS L +NL + +GA I++ + N
Sbjct: 1022 IATALSGNHRLQHINLQGNHIGDSGARMISEAIKTN 1057
Score = 115 (45.5 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 29/109 (26%), Positives = 55/109 (50%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
+++ ++L +N I+ KGA L ++L SL L+L + GA ++A L N TL
Sbjct: 667 RIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTS 726
Query: 99 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
++L N + G + +A+ + L +++ +N G G + M +K
Sbjct: 727 LSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALK 775
Score = 108 (43.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 32/131 (24%), Positives = 63/131 (48%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
+TL + + +N I G A++ A N L++L+L N + +GA + A+ + +L
Sbjct: 834 QTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLT 893
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+L +++ A ++ + L N +L ++L N I G + +A+K T L + +
Sbjct: 894 SLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYL 953
Query: 130 SENQFGEEGVE 140
G G +
Sbjct: 954 QVASIGASGAQ 964
Score = 90 (36.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 29/109 (26%), Positives = 50/109 (45%)
Query: 41 RHLNLNDNTITYKGAIPLGQALS-KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
R L L+ N LG LS K + ++L + + + GA ++A+ L N +L +
Sbjct: 640 RKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSL 699
Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
+L N I QG L A+K L +++ N ++G M + + S
Sbjct: 700 DLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALAS 748
Score = 43 (20.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
N L +GA +A L+ + + N I G +S+A + N
Sbjct: 1012 NSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTN 1057
>MGI|MGI:2444070 [details] [associations]
symbol:Nlrc3 "NLR family, CARD domain containing 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0007249 "I-kappaB kinase/NF-kappaB cascade"
evidence=ISO;ISS] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=ISO;ISS] [GO:0042110 "T
cell activation" evidence=ISS] MGI:MGI:2444070 GO:GO:0005524
GO:GO:0005737 GO:GO:0042110 GO:GO:0032088 GO:GO:0007249
InterPro:IPR007111 PROSITE:PS50837 eggNOG:NOG69209
HOGENOM:HOG000108875 HOVERGEN:HBG055285 EMBL:AK220314 EMBL:AK079766
EMBL:AK084199 EMBL:AK171971 EMBL:BC130223 IPI:IPI00652368
IPI:IPI00671345 IPI:IPI00677124 IPI:IPI00678735 IPI:IPI00828619
UniGene:Mm.215994 ProteinModelPortal:Q5DU56 SMR:Q5DU56
PhosphoSite:Q5DU56 PRIDE:Q5DU56 Ensembl:ENSMUST00000180200
UCSC:uc007xzc.1 UCSC:uc007xzd.1 UCSC:uc007xze.1
GeneTree:ENSGT00690000101889 OrthoDB:EOG4BZN26 CleanEx:MM_NLRC3
Genevestigator:Q5DU56 Uniprot:Q5DU56
Length = 1064
Score = 202 (76.2 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 72/259 (27%), Positives = 113/259 (43%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGC---KLLSKALHDCY 283
L+ LDL N+ GP G + LAD L+ + C L+S
Sbjct: 695 LITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISML 754
Query: 284 ESSKK-----EGSPLA--------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
+ K +A LK + N + + GA LA K + LE +++
Sbjct: 755 QLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQS 814
Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
N I +G+T L A N+ L LNL +N+I+ +GA L QAL + +L L+L LL
Sbjct: 815 NSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLH 874
Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
GA +IA + +N +L ++L N I L +A++ L +++ EN G+EG
Sbjct: 875 DRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGA 934
Query: 451 EEMEKLMKSFGMAAALVLE 469
+ +K AL L+
Sbjct: 935 SSVAGALKVNTTLIALYLQ 953
Score = 184 (69.8 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 65/229 (28%), Positives = 103/229 (44%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
LK L LDL N+ +GV L L S+ + G + L++AL
Sbjct: 801 LKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPE--GAQALTQAL- 857
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
C ++ K L L N L + GA+ +A + +L + + N I A
Sbjct: 858 -CRNNTLKH---LDLTA-----NLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARA 908
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L A + N+ L L+L +N I +GA + AL +L L L + S GA ++ +
Sbjct: 909 LGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEA 968
Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
LT N TLE ++L N++ G L A+K + L+++N+ EN G +G
Sbjct: 969 LTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDG 1017
Score = 178 (67.7 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 71/251 (28%), Positives = 109/251 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
LK L L S N G G LA+ L+ + G +L +AL
Sbjct: 773 LKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDM--GVTVLMRAL- 829
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
C S + S L L+ N + EGA+ L + TL+ +++ N ++ G A
Sbjct: 830 -C---SNQTLSSLNLR-----ENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQA 880
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
++ A EN +L HL+L N I A LGQAL +L L+L + + GASS+A
Sbjct: 881 IAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGA 940
Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
L NTTL + L I QG L +A+ L+ +++ N G G + + +K
Sbjct: 941 LKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLN 1000
Query: 461 GMAAALVLEDD 471
L L+++
Sbjct: 1001 SSLRRLNLQEN 1011
Score = 175 (66.7 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 50/156 (32%), Positives = 80/156 (51%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA K + LE++++ N I +G+T L A N+ L LNL +N+I+ +GA L QA
Sbjct: 797 LAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQA 856
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + +L L+L LL GA +IA + +N +L ++L N I L +A++
Sbjct: 857 LCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLN 916
Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
L +++ EN G+EG + +K AL L
Sbjct: 917 RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYL 952
Score = 174 (66.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/176 (27%), Positives = 91/176 (51%)
Query: 296 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 355
K+ +A N++ N+GAK LA ++L +++ N I G AL+DA + N+ L L+
Sbjct: 669 KISLA-ENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSLS 727
Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
L N I G + + +AL ++++L L L+ GA +A L N +L+ + + N
Sbjct: 728 LQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSN 787
Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
I +G + L +A+K L+ +++ N + GV + + + S ++L L ++
Sbjct: 788 TIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLREN 843
Score = 160 (61.4 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 41/128 (32%), Positives = 66/128 (51%)
Query: 11 TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
+L H+ + N I AL A + N+ L L+L +N I +GA + AL +L
Sbjct: 890 SLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIA 949
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
L L + S GA ++ + LT N TLE ++L N++ G L A+K + L+++N+
Sbjct: 950 LYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQ 1009
Query: 131 ENQFGEEG 138
EN G +G
Sbjct: 1010 ENSLGMDG 1017
Score = 159 (61.0 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 38/131 (29%), Positives = 69/131 (52%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
+T+ +++ +N I +G ++DA ++N+ L+ L + NTI +GAI L +AL L
Sbjct: 749 QTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILE 808
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+L + G + + + L N TL +NL N IS +G L +A+ LK +++
Sbjct: 809 NLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDL 868
Query: 130 SENQFGEEGVE 140
+ N + G +
Sbjct: 869 TANLLHDRGAQ 879
Score = 156 (60.0 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 43/157 (27%), Positives = 80/157 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N ++ A+ L + +TL +++ +N I G ++++ A + N L L L +I
Sbjct: 899 NFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIG 958
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+GA LG+AL+ +L IL+L + +AGA ++A L N++L +NL N + + G
Sbjct: 959 SQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGA 1018
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ + A+ L IN+ N GE + + +K+
Sbjct: 1019 IFVASALSENHGLHHINLQGNPIGESAARMISEAIKT 1055
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 11 TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
TL+H+++ N ++ G A++ A EN L HL+L N I A LGQAL +L
Sbjct: 862 TLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTT 921
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
L+L + + GASS+A L NTTL + L I QG L +A+ L+ +++
Sbjct: 922 LDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLR 981
Query: 131 ENQFGEEGVEEMEKLMK 147
N G G + + +K
Sbjct: 982 GNDVGAAGAKALANALK 998
Score = 149 (57.5 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA K +TL + + N I G+ +++A N+ + L L N I GA + A
Sbjct: 713 LADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADA 772
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + SL L + GA ++A+ L N LE+++L N IS G L++A+ +
Sbjct: 773 LKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSN 832
Query: 122 TKLKQINVSENQFGEEGVEEMEKLM 146
L +N+ EN EG + + + +
Sbjct: 833 QTLSSLNLRENSISPEGAQALTQAL 857
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/139 (28%), Positives = 73/139 (52%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
+TL +++ +N I G ++++ A + N L L L +I +GA LG+AL+ +L
Sbjct: 917 RTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLE 976
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
IL+L + +AGA ++A L N++L +NL N + + G + + A+ L IN+
Sbjct: 977 ILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGAIFVASALSENHGLHHINL 1036
Query: 130 SENQFGEEGVEEMEKLMKS 148
N GE + + +K+
Sbjct: 1037 QGNPIGESAARMISEAIKT 1055
Score = 140 (54.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
+ + + +N I + G AL+ + N+ L L+L N+I GA L AL +L L
Sbjct: 667 IRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTSL 726
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
+L ++K G +A+ L N T+ + L N I + G + A+K LK + S
Sbjct: 727 SLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALMFSS 786
Query: 132 NQFGEEGVEEMEKLMK 147
N G+ G + + +K
Sbjct: 787 NTIGDRGAIALAEALK 802
Score = 140 (54.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 37/139 (26%), Positives = 71/139 (51%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
++L +++ N I G AL+DA + N+ L L+L N I G + + +AL +++
Sbjct: 693 RSLITLDLRSNSIGPPGAKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTIS 752
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
+L L L+ GA +A L N +L+ + + N I +G + L +A+K L+ +++
Sbjct: 753 MLQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDL 812
Query: 130 SENQFGEEGVEEMEKLMKS 148
N + GV + + + S
Sbjct: 813 QSNSISDMGVTVLMRALCS 831
Score = 131 (51.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 36/131 (27%), Positives = 68/131 (51%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A K+ ++L+ + N I G AL++A + N+ L +L+L N+I+ G L +A
Sbjct: 769 MADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRA 828
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L +L+ LNL + + GA ++ + L N TL+ ++LT N + +G + A+
Sbjct: 829 LCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGEN 888
Query: 122 TKLKQINVSEN 132
L +++ N
Sbjct: 889 HSLTHLHLQWN 899
Score = 129 (50.5 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
+TL + + +N I G AL+ A N L+HL+L N + +GA + A+ + SL
Sbjct: 833 QTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLT 892
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+L +++ A ++ + L N TL ++L N I +G + A+K T L + +
Sbjct: 893 HLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYL 952
Query: 130 SENQFGEEGVEEM 142
G +G + +
Sbjct: 953 QVASIGSQGAQAL 965
Score = 115 (45.5 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 33/99 (33%), Positives = 57/99 (57%)
Query: 307 NEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGA 366
++GA+ L +TLE +++ N + G AL++A + N +LR LNL +N++ GA
Sbjct: 959 SQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGMDGA 1018
Query: 367 IPLGQALSKLPSLAILNL-GDCLLKSAGASSIAKYLTDN 404
I + ALS+ L +NL G+ + +SA A I++ + N
Sbjct: 1019 IFVASALSENHGLHHINLQGNPIGESA-ARMISEAIKTN 1056
Score = 111 (44.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
++R ++L +N I KGA L ++L SL L+L + GA ++A L N TL
Sbjct: 666 RIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALADALKINRTLTS 725
Query: 99 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALV 156
++L N I G + + +A+ + + + + +N G G ++M +K AL+
Sbjct: 726 LSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQNRSLKALM 783
Score = 40 (19.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 29/128 (22%), Positives = 46/128 (35%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
LK L+ L L + G G + L + L + G K L+ AL
Sbjct: 941 LKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAA--GAKALANALK 998
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
SS + L L+ N L +GA +A+ + L + + N I
Sbjct: 999 --LNSSLRR---LNLQ-----ENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARM 1048
Query: 341 LSDAFEEN 348
+S+A + N
Sbjct: 1049 ISEAIKTN 1056
>POMBASE|SPAC22E12.07 [details] [associations]
symbol:rna1 "Ran GAP Rna1" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IGI] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0032853 "positive regulation of Ran GTPase activity"
evidence=TAS] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IGI] InterPro:IPR027038 PomBase:SPAC22E12.07 GO:GO:0005829
GO:GO:0048471 GO:GO:0046827 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0031965 GO:GO:0006913 GO:GO:0030702 GO:GO:0000070
GO:GO:0051383 eggNOG:COG5238 KO:K14319 GO:GO:0005098
PANTHER:PTHR24113 HOGENOM:HOG000195026 PDB:1K5D PDB:1K5G
PDBsum:1K5D PDBsum:1K5G EMBL:X69882 PIR:S37691 RefSeq:NP_594833.1
PDB:1YRG PDB:2CA6 PDBsum:1YRG PDBsum:2CA6 ProteinModelPortal:P41391
SMR:P41391 IntAct:P41391 STRING:P41391 PRIDE:P41391
EnsemblFungi:SPAC22E12.07.1 GeneID:2541863 KEGG:spo:SPAC22E12.07
OMA:GIQHAGI OrthoDB:EOG40S3QS EvolutionaryTrace:P41391
NextBio:20802950 Uniprot:P41391
Length = 386
Score = 257 (95.5 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 81/253 (32%), Positives = 121/253 (47%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYES 285
+L + LSDNAFGP E L D L G K+ ++AL + +
Sbjct: 95 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQ-AGAKI-ARALQELAVN 152
Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDA 344
K + +P L+ I GRNRLEN K A F+ + L V+M QNGI GI L +
Sbjct: 153 KKAKNAP-PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEG 211
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-- 402
+ L+ L+L DNT T+ G+ L AL P+L L L DCLL + GA+++ +
Sbjct: 212 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271
Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEG--VEEMEKLMKS 459
+N L+ + L NEI + L + K L + ++ N+F EE V+E+ ++ +
Sbjct: 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFST 331
Query: 460 FGMAAALVLEDDE 472
G L+D E
Sbjct: 332 RGRGELDELDDME 344
Score = 165 (63.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 49/154 (31%), Positives = 79/154 (51%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
A F+ + L V+M QNGI GI L + ++L+ L+L DNT T+ G+ L A
Sbjct: 180 AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMK 119
L P+L L L DCLL + GA+++ + +N L+ + L NEI + L +
Sbjct: 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVID 299
Query: 120 NKTK-LKQINVSENQFGEEG--VEEMEKLMKSFG 150
K L + ++ N+F EE V+E+ ++ + G
Sbjct: 300 EKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRG 333
>CGD|CAL0000022 [details] [associations]
symbol:RNA1 species:5476 "Candida albicans" [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016072 "rRNA metabolic process" evidence=IEA]
[GO:0000054 "ribosomal subunit export from nucleus" evidence=IEA]
[GO:0006399 "tRNA metabolic process" evidence=IEA] [GO:0006407
"rRNA export from nucleus" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0006404 "RNA import into nucleus" evidence=IEA]
[GO:0005098 "Ran GTPase activator activity" evidence=IEA]
InterPro:IPR027038 CGD:CAL0000022 EMBL:AACQ01000013 KO:K14319
PANTHER:PTHR24113 HOGENOM:HOG000195026 RefSeq:XP_721726.1
ProteinModelPortal:Q5AJS1 STRING:Q5AJS1 GeneID:3636595
KEGG:cal:CaO19.1649 Uniprot:Q5AJS1
Length = 414
Score = 254 (94.5 bits), Expect = 9.6e-20, P = 9.6e-20
Identities = 76/232 (32%), Positives = 116/232 (50%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
++LSDNAFG ++ + L + G ++ +L ++ K E
Sbjct: 110 INLSDNAFGLQTIDPIEAYLAKAVSIEHLILSNNGMGP-FAGSRI-GGSLFKLAKAKKAE 167
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEEN 348
G +LK FI GRNRLEN L+ + K LE V + QNGI GI+ L + N
Sbjct: 168 GKE-SLKTFICGRNRLENGSVNYLSVGLRNHKDLEVVRLYQNGIRPAGISKLVEQGLSNN 226
Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNT 405
K L+ L+L DNTIT +GAI + ++LS P L LNL D LLK+ G+ + + +
Sbjct: 227 KKLKVLDLQDNTITTRGAIHIAESLSNWPLLVELNLNDSLLKNKGSLKLVEAFHAGDEKP 286
Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKL 456
L + L NE+ L A+ +K +LK + ++ N+F EE E ++K+
Sbjct: 287 QLITLKLQYNELETDSLRVLADAIASKLPQLKFLELNGNRF-EEDSEHIDKI 337
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 53/149 (35%), Positives = 81/149 (54%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSD-AFEENKKLRHLNLNDNTITYKGAIPLGQ 60
L+ + K LE V + QNGI GI+ L + NKKL+ L+L DNTIT +GAI + +
Sbjct: 190 LSVGLRNHKDLEVVRLYQNGIRPAGISKLVEQGLSNNKKLKVLDLQDNTITTRGAIHIAE 249
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCNEISVQGGLDLVKA 117
+LS P L LNL D LLK+ G+ + + + L + L NE+ L A
Sbjct: 250 SLSNWPLLVELNLNDSLLKNKGSLKLVEAFHAGDEKPQLITLKLQYNELETDSLRVLADA 309
Query: 118 MKNKT-KLKQINVSENQFGEEGVEEMEKL 145
+ +K +LK + ++ N+F EE E ++K+
Sbjct: 310 IASKLPQLKFLELNGNRF-EEDSEHIDKI 337
>TAIR|locus:2194604 [details] [associations]
symbol:emb2004 "embryo defective 2004" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009941 eggNOG:NOG69209 EMBL:AY056236
EMBL:AY091215 IPI:IPI00540032 RefSeq:NP_563871.1 UniGene:At.26354
ProteinModelPortal:Q93ZV8 SMR:Q93ZV8 IntAct:Q93ZV8 PaxDb:Q93ZV8
PRIDE:Q93ZV8 EnsemblPlants:AT1G10510.1 GeneID:837591
KEGG:ath:AT1G10510 TAIR:At1g10510 HOGENOM:HOG000264659
InParanoid:Q93ZV8 OMA:NNMIDYS PhylomeDB:Q93ZV8
ProtClustDB:CLSN2687758 ArrayExpress:Q93ZV8 Genevestigator:Q93ZV8
Uniprot:Q93ZV8
Length = 605
Score = 160 (61.4 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 48/173 (27%), Positives = 85/173 (49%)
Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
S + LK+ N + +EGAK L A + ++E +++ I G +++ + N
Sbjct: 224 SNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNST 283
Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
LR + LN+N I Y G L AL + ++ L+L + GA+++AK L N +L ++
Sbjct: 284 LRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLREL 343
Query: 411 NLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEG---VEEMEKLMKS 459
+L N I +G L+ + + K K+ +++ N +G V E K KS
Sbjct: 344 HLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKS 396
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 48/159 (30%), Positives = 72/159 (45%)
Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
V ++G N +EG LA +T+E V NGI G+ A + N L+ LNL
Sbjct: 175 VDMSGCN-FGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKILNL 233
Query: 357 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
+ N I +GA L L + S+ IL L + GA IA+ L N+TL + L N
Sbjct: 234 SGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNM 293
Query: 417 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
I G L A+ ++ ++++ N G G + K
Sbjct: 294 IDYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAK 332
Score = 154 (59.3 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 42/177 (23%), Positives = 91/177 (51%)
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
E K+ S + L +++ N + +EGA+ +A K+ +++ +++ N I+ G+ A++
Sbjct: 389 EYIKRSKSLVWLNLYM---NDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQ 445
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
A ++N + L + N I GA L + L ++ L LG C + + GA +A L
Sbjct: 446 ALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAEHVADMLRY 505
Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 459
N T+ ++L N + +G L +++K + L +++ N+ ++G + + +K+
Sbjct: 506 NNTISVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQALKA 562
Score = 152 (58.6 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 41/135 (30%), Positives = 62/135 (45%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
+T+E V NGI G+ A + N L+ LNL+ N I +GA L L + S+
Sbjct: 198 QTVEEVSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIE 257
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
IL L + GA IA+ L N+TL + L N I G L A+ ++ +++
Sbjct: 258 ILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHL 317
Query: 130 SENQFGEEGVEEMEK 144
+ N G G + K
Sbjct: 318 NGNYGGALGANALAK 332
Score = 152 (58.6 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 44/161 (27%), Positives = 76/161 (47%)
Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN-LRHLNLNDNTITYKGAI 367
GA LA + K+L + + N I G AL +K + L+L +N+I+ KGA
Sbjct: 326 GANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAF 385
Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
+ + + + SL LNL + GA IA L N ++ ++L N I +G + +
Sbjct: 386 YVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQ 445
Query: 428 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
A+K+ + + V N G +G + + +++K G L L
Sbjct: 446 ALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKL 486
Score = 148 (57.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 41/149 (27%), Positives = 72/149 (48%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
K+L + + N I G AL +K K+ L+L +N+I+ KGA + + + + SL
Sbjct: 338 KSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKSL 397
Query: 69 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
LNL + GA IA L N ++ ++L N I +G + +A+K+ + +
Sbjct: 398 VWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLE 457
Query: 129 VSENQFGEEGVEEMEKLMKSFGMAAALVL 157
V N G +G + + +++K G L L
Sbjct: 458 VGYNPIGPDGAKALSEILKFHGNVKTLKL 486
Score = 145 (56.1 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 43/167 (25%), Positives = 75/167 (44%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N + G K V + L+ + + N I G L EN ++ L LN I
Sbjct: 208 NGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIG 267
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+GA + + L + +L I+ L + ++ +G +S+A L +N T+ +++L N G
Sbjct: 268 DEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGA 327
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEE-MEKLMKSFGMAAALVL 468
L K ++ L+++++ N G+EG M L G A L L
Sbjct: 328 NALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDL 374
Score = 136 (52.9 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 39/147 (26%), Positives = 68/147 (46%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
L+ + + N I G L EN + L LN I +GA + + L + +L I+
Sbjct: 228 LKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRII 287
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
L + ++ +G +S+A L +N T+ +++L N G L K ++ L+++++
Sbjct: 288 ELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHG 347
Query: 132 NQFGEEGVEE-MEKLMKSFGMAAALVL 157
N G+EG M L G A L L
Sbjct: 348 NSIGDEGTRALMAGLSSHKGKVALLDL 374
Score = 134 (52.2 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 41/171 (23%), Positives = 83/171 (48%)
Query: 289 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEE 347
EG+ ++ + G N + +EG + L A K + +++ N I G +++ +
Sbjct: 335 EGNKSLRELHLHG-NSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKR 393
Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
+K+L LNL N I +GA + +L + S+A ++LG + + G ++IA+ L DN +
Sbjct: 394 SKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAII 453
Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+ + N I G L + +K +K + + Q +G E + +++
Sbjct: 454 TTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAEHVADMLR 504
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/148 (22%), Positives = 75/148 (50%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A K+ +++ +++ N I+ G+ A++ A ++N + L + N I GA L +
Sbjct: 415 IADSLKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEI 474
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L ++ L LG C + + GA +A L N T+ ++L N + +G L +++K
Sbjct: 475 LKFHGNVKTLKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLKVV 534
Query: 122 TK-LKQINVSENQFGEEGVEEMEKLMKS 148
+ L +++ N+ ++G + + +K+
Sbjct: 535 NEALTSVDLGFNEIRDDGAFAIAQALKA 562
Score = 126 (49.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L A + ++E +++ I G +++ + N LR + LN+N I Y G L A
Sbjct: 246 LCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGA 305
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN- 120
L + ++ L+L + GA+++AK L N +L +++L N I +G L+ + +
Sbjct: 306 LLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSH 365
Query: 121 KTKLKQINVSENQFGEEG---VEEMEKLMKS 148
K K+ +++ N +G V E K KS
Sbjct: 366 KGKVALLDLGNNSISAKGAFYVAEYIKRSKS 396
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 32/146 (21%), Positives = 67/146 (45%)
Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
+++ E + L K+L++ V+M G+ L+++ N+ + ++ + N IT
Sbjct: 153 KVDREAKQRLNEFAKELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITA 212
Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
G L L ILNL + GA ++ L +N+++E + L +I +G
Sbjct: 213 AGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAK 272
Query: 424 DLVKAMKNKTKLKQINVSENQFGEEG 449
++ + +K + L+ I ++ N G
Sbjct: 273 EIAELLKRNSTLRIIELNNNMIDYSG 298
Score = 117 (46.2 bits), Expect = 0.00094, P = 0.00094
Identities = 32/133 (24%), Positives = 65/133 (48%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+++ N I G +++ + +K L LNL N I +GA + +L + S+A ++LG
Sbjct: 372 LDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLG 431
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ + G ++IA+ L DN + + + N I G L + +K +K + + Q
Sbjct: 432 GNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQI 491
Query: 135 GEEGVEEMEKLMK 147
+G E + +++
Sbjct: 492 AAKGAEHVADMLR 504
Score = 115 (45.5 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 30/132 (22%), Positives = 61/132 (46%)
Query: 7 KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
K+L++ V+M G+ L+++ N+ + ++ + N IT G L
Sbjct: 167 KELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNI 226
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
L ILNL + GA ++ L +N+++E + L +I +G ++ + +K + L+
Sbjct: 227 MLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRI 286
Query: 127 INVSENQFGEEG 138
I ++ N G
Sbjct: 287 IELNNNMIDYSG 298
Score = 103 (41.3 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 55/223 (24%), Positives = 96/223 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
+K LV L+L N G G E +AD L+ + A G +++AL
Sbjct: 391 IKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAE--GVNAIAQALK 448
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
D L+V G N + +GAK L+ + K ++ +++ I G
Sbjct: 449 D-------NAIITTLEV---GYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAEH 498
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL-PSLAILNLGDCLLKSAGASSIAK 399
++D N + L+L N + +GA L ++L + +L ++LG ++ GA +IA+
Sbjct: 499 VADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQ 558
Query: 400 YLTDN--TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
L N T+ +NL N I+ G L A + ++ + V
Sbjct: 559 ALKANEDVTVTSINLGNNFITKFGQSALTDARDHVLEMTEKEV 601
Score = 89 (36.4 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
L + +L S +++ C G +A+ L N T+E+V+ + N I+ G
Sbjct: 162 LNEFAKELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGV 221
Query: 118 MKNKTKLKQINVSENQFGEEGVEEM 142
+++ LK +N+S N G+EG + +
Sbjct: 222 LQSNIMLKILNLSGNPIGDEGAKTL 246
>SGD|S000004848 [details] [associations]
symbol:RNA1 "GTPase activating protein (GAP) for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0016072 "rRNA
metabolic process" evidence=IMP] [GO:0006404 "RNA import into
nucleus" evidence=IMP] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006399 "tRNA metabolic process" evidence=IMP] [GO:0005098 "Ran
GTPase activator activity" evidence=IDA;IMP] [GO:0006606 "protein
import into nucleus" evidence=IDA] [GO:0000054 "ribosomal subunit
export from nucleus" evidence=IMP] [GO:0006407 "rRNA export from
nucleus" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
SGD:S000004848 GO:GO:0016021 GO:GO:0005829 GO:GO:0005634
EMBL:BK006946 GO:GO:0006606 GO:GO:0006348 EMBL:Z49939 GO:GO:0006399
GO:GO:0016072 GO:GO:0000054 GO:GO:0006404 GO:GO:0006407
eggNOG:COG5238 KO:K14319 GeneTree:ENSGT00440000039203 OMA:AEETAYV
GO:GO:0005098 HOGENOM:HOG000195026 OrthoDB:EOG40S3QS EMBL:M27143
EMBL:M27142 EMBL:X17376 EMBL:X57160 PIR:A32492 RefSeq:NP_013962.1
ProteinModelPortal:P11745 SMR:P11745 DIP:DIP-2509N IntAct:P11745
MINT:MINT-558123 STRING:P11745 PaxDb:P11745 PeptideAtlas:P11745
EnsemblFungi:YMR235C GeneID:855275 KEGG:sce:YMR235C CYGD:YMR235c
NextBio:978897 Genevestigator:P11745 GermOnline:YMR235C
Uniprot:P11745
Length = 407
Score = 219 (82.2 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 75/239 (31%), Positives = 118/239 (49%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
++LSDNAFG +E L D + + G + + KAL ++ K
Sbjct: 113 VNLSDNAFGLRTIELLEDYIAHAVNIKHLILSNNGMGP-FAG-ERIGKALFHLAQNKKAA 170
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEE 347
P L+ FI GRNRLEN A LA K + L+ V++ QNGI G+ T + +
Sbjct: 171 SKPF-LETFICGRNRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQY 229
Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNT- 405
KNL L+L DNT T ++ L +AL SL LNL DCLLK+AG+ + K T+
Sbjct: 230 LKNLEILDLQDNTFTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFTEVKF 289
Query: 406 -TLEDVNLTCNEISVQG-GLDLVKAMK--NKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
L + NE++ + + + AM+ N +L+++ ++ N+ E+ + ++ L F
Sbjct: 290 PNLHVLKFEYNEMAQETIEVSFLPAMEKGNLPELEKLEINGNRLDEDS-DALDLLQSKF 347
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 44/145 (30%), Positives = 76/145 (52%)
Query: 12 LEHVEMPQNGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
L+ V++ QNGI G+ T + + K L L+L DNT T ++ L +AL SL
Sbjct: 204 LKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNTFTKHASLILAKALPTWKDSLF 263
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEISVQG-GLDLVKAMK--NKTKL 124
LNL DCLLK+AG+ + K T+ L + NE++ + + + AM+ N +L
Sbjct: 264 ELNLNDCLLKTAGSDEVFKVFTEVKFPNLHVLKFEYNEMAQETIEVSFLPAMEKGNLPEL 323
Query: 125 KQINVSENQFGEEGVEEMEKLMKSF 149
+++ ++ N+ E+ + ++ L F
Sbjct: 324 EKLEINGNRLDEDS-DALDLLQSKF 347
Score = 53 (23.7 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 24/97 (24%), Positives = 46/97 (47%)
Query: 57 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT----TLEDVNLTCNEIS--VQG 110
P + L+ L + L+L + + + ++AK + +NT +L +VN S V
Sbjct: 33 PYLEELAALKTCTKLDLSGNTIGTEASEALAKCIAENTQVRESLVEVNFADLYTSRLVDE 92
Query: 111 GLDLVK----AMKNKTKLKQINVSENQFGEEGVEEME 143
+D +K + L+ +N+S+N FG +E +E
Sbjct: 93 VVDSLKFLLPVLLKCPHLEIVNLSDNAFGLRTIELLE 129
Score = 37 (18.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 229 ELDLSDNAFGPIGVEGLA 246
+LDLS N G E LA
Sbjct: 46 KLDLSGNTIGTEASEALA 63
>ASPGD|ASPL0000071633 [details] [associations]
symbol:ranGAP species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0046827 "positive
regulation of protein export from nucleus" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0051383
"kinetochore organization" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR027038 EMBL:BN001303 EMBL:AACD01000084 eggNOG:COG5238
KO:K14319 PANTHER:PTHR24113 HOGENOM:HOG000195026 OMA:NTIGIEA
OrthoDB:EOG40S3QS RefSeq:XP_662466.1 ProteinModelPortal:Q5B3L8
SMR:Q5B3L8 STRING:Q5B3L8 EnsemblFungi:CADANIAT00005543
GeneID:2872661 KEGG:ani:AN4862.2 Uniprot:Q5B3L8
Length = 417
Score = 226 (84.6 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 78/242 (32%), Positives = 114/242 (47%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY---ESS 286
++LSDNAFG + L D L G + +KAL + E +
Sbjct: 100 INLSDNAFGANTQKPLVDFLSRHIPLRHLVLNNNGMGPE-AGSNI-AKALTELAQRKEEA 157
Query: 287 KKEGS--PLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT-ALS 342
+ G PL L+ + GRNRLEN A +K + V+M QNGI GI+ L
Sbjct: 158 RSGGKEVPL-LESIVCGRNRLENGSMAAWAHAYKAHAAGIRSVKMTQNGIRQEGISHLLK 216
Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
+ L L+L DNT T G+ L +S PSL L +GDCLL + G +A+ L
Sbjct: 217 EGLSHASALEVLDLQDNTFTITGSTALAGVVSGWPSLRELGVGDCLLSARGGIKLAQALA 276
Query: 403 D--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVE--EMEKLM 457
N +E + L N+IS +G + A K L++I ++ N+F EE V E+ +L+
Sbjct: 277 KAKNQKVEILRLQYNDISAEGVKQFLHAAKTALPALRRIELNGNKFQEEDVNVTELSELL 336
Query: 458 KS 459
+S
Sbjct: 337 ES 338
Score = 182 (69.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 50/143 (34%), Positives = 75/143 (52%)
Query: 12 LEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
+ V+M QNGI GI+ L + L L+L DNT T G+ L +S PSL
Sbjct: 196 IRSVKMTQNGIRQEGISHLLKEGLSHASALEVLDLQDNTFTITGSTALAGVVSGWPSLRE 255
Query: 71 LNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQI 127
L +GDCLL + G +A+ L N +E + L N+IS +G + A K L++I
Sbjct: 256 LGVGDCLLSARGGIKLAQALAKAKNQKVEILRLQYNDISAEGVKQFLHAAKTALPALRRI 315
Query: 128 NVSENQFGEEGVE--EMEKLMKS 148
++ N+F EE V E+ +L++S
Sbjct: 316 ELNGNKFQEEDVNVTELSELLES 338
>ZFIN|ZDB-GENE-050208-711 [details] [associations]
symbol:si:ch211-213a13.5 "si:ch211-213a13.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050208-711
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
OrthoDB:EOG4TTGHK GeneTree:ENSGT00690000101934 eggNOG:NOG257844
HOVERGEN:HBG092009 EMBL:BX248395 EMBL:BX664621 IPI:IPI00899095
Ensembl:ENSDART00000138646 Uniprot:F6NX52
Length = 3009
Score = 178 (67.7 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 64/244 (26%), Positives = 115/244 (47%)
Query: 221 LKTG-ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK+ + L+ELDL N G GV+ L DL + C ++G S A
Sbjct: 1926 LKSNPSHLIELDLRGNDPGQSGVKELTDLSQYRC--------KTLTIRFLSG----SGAE 1973
Query: 280 HDCYESSKKEG-SPLALKVFIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
C +K G SPL L ++L++ +G K+ A + +E++++ +
Sbjct: 1974 EACAHLTKVVGISPLLLTELDLNEDKLKDLDGEKLSALLMDSHSKVEKMKLNNCELTEKS 2033
Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASS 396
L+ NL+ LNLN++ + G + + L + L IL L C L S+
Sbjct: 2034 CPVLAAVLSSKTNLKELNLNNSRLLDSGVRVICEGLKNPVCELKILKLSKCNLTEESCSA 2093
Query: 397 IAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
+A L +D+++L+D++L+ N + G L +K+ +KL+++N+S+ EEG + +
Sbjct: 2094 LASVLRSDSSSLKDLDLSNNNLQDSGVKLLTDGLKH-SKLEKLNLSDCSISEEGYKALAS 2152
Query: 456 LMKS 459
+ S
Sbjct: 2153 ALGS 2156
Score = 137 (53.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 68/258 (26%), Positives = 111/258 (43%)
Query: 221 LKTG-ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK+ + L+ELDL N G GV+ L +LL+ C A + LS A
Sbjct: 1754 LKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKL--------------RFLSSAA 1799
Query: 280 HDCYESSKK-EG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHV 336
D + K G +PL LK +L++ K L+ + + K + + + + I
Sbjct: 1800 DDVCQFVKGIVGKNPLLLKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEE 1859
Query: 337 GITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGA 394
AL+ AF N NL+ LNL+ N + G + L +K L L+L DC + G
Sbjct: 1860 DCAALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLSLSDCSISEEGY 1919
Query: 395 SSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
++A L N + L +++L N+ G +L + + K I EE +
Sbjct: 1920 KALASALKSNPSHLIELDLRGNDPGQSGVKELTDLSQYRCKTLTIRFLSGSGAEEACAHL 1979
Query: 454 EKLMKSFGMAAALVLEDD 471
K++ G++ L+ E D
Sbjct: 1980 TKVV---GISPLLLTELD 1994
Score = 128 (50.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 62/225 (27%), Positives = 99/225 (44%)
Query: 221 LKTG-ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK+ + L+ELDL N G GV+ L +LL+ C A L S A
Sbjct: 1582 LKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRF-------------LSSAAD 1628
Query: 280 HDCYESSKKEG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVG 337
H C G +PL LK +L++ K L+ + + K + + + + I
Sbjct: 1629 HVCQFVKGIVGKNPLLLKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEED 1688
Query: 338 ITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGAS 395
AL+ AF N NL+ LNL+ N + G + L +K L L L DC + G
Sbjct: 1689 CAALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYK 1748
Query: 396 SIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 436
++A L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1749 ALASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1793
Score = 128 (50.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 62/225 (27%), Positives = 99/225 (44%)
Query: 221 LKTG-ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK+ + L+ELDL N G GV+ L +LL+ C A L S A
Sbjct: 1238 LKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRF-------------LSSAAD 1284
Query: 280 HDCYESSKKEG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVG 337
H C G +PL LK +L++ K L+ + + K + + + + I
Sbjct: 1285 HVCQFVKGIVGKNPLLLKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEED 1344
Query: 338 ITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGAS 395
AL+ AF N NL+ LNL+ N + G + L +K L L L DC + G
Sbjct: 1345 CAALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYK 1404
Query: 396 SIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 436
++A L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1405 ALASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1449
Score = 126 (49.4 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 61/226 (26%), Positives = 101/226 (44%)
Query: 221 LKTG-ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK+ + L+ELDL N G GV+ L +LL+ C A + LS A
Sbjct: 1410 LKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKL--------------RFLSSAA 1455
Query: 280 HDCYESSKK-EG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHV 336
D + K G +PL LK +L++ K L+ + + K + + + + I
Sbjct: 1456 DDVCQFVKGIVGKNPLLLKKLNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEE 1515
Query: 337 GITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGA 394
L+ AF N NL+ LNL++N + G + L +K L L L DC + G
Sbjct: 1516 DCAVLTSAFILNPSNLKELNLSENKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGY 1575
Query: 395 SSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 436
++A L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1576 KALASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1621
Score = 125 (49.1 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 60/220 (27%), Positives = 94/220 (42%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+ L+ELDL N G GV+ L DLL+ C A L S A H C
Sbjct: 1071 SHLIELDLRGNDPGQSGVKELTDLLQDPLCKANLRF-------------LSSAADHVCQF 1117
Query: 285 SSKKEG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALS 342
G +PL LK +L++ K L+ + + K + + + + I L+
Sbjct: 1118 VKGIVGKNPLLLKKLNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEEDCAVLT 1177
Query: 343 DAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKY 400
AF N NL+ LNL+ N + G L +K L L L DC + G ++A
Sbjct: 1178 SAFILNPSNLKELNLSGNKLGNSGISKFCPLLENKQCGLEKLRLSDCSISEEGYKALASA 1237
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 436
L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1238 LKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1277
Score = 121 (47.7 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 33/121 (27%), Positives = 63/121 (52%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAK 88
L+ L+ LNLN++ + G + + L + L IL L C L S++A
Sbjct: 2037 LAAVLSSKTNLKELNLNNSRLLDSGVRVICEGLKNPVCELKILKLSKCNLTEESCSALAS 2096
Query: 89 YL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
L +D+++L+D++L+ N + G L +K+ +KL+++N+S+ EEG + + +
Sbjct: 2097 VLRSDSSSLKDLDLSNNNLQDSGVKLLTDGLKH-SKLEKLNLSDCSISEEGYKALASALG 2155
Query: 148 S 148
S
Sbjct: 2156 S 2156
Score = 120 (47.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 40/170 (23%), Positives = 83/170 (48%)
Query: 291 SPLALKVFIAGRNRLENEGAKMLAA-VFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
+PL L + +L++ + L+A + +E++ + + + + L+ +NK
Sbjct: 2384 NPLLLTELDLSKVKLKDHNWEKLSAFLLDSCCIVEKIMLNKCEVTKKMCSVLATVLSKNK 2443
Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LE 408
L+ ++LN + + G + + L K SL ILNL DC + G ++A L N + L
Sbjct: 2444 LLKEMDLNSSPLLDSGVKKICEGLKK-SSLKILNLSDCSISEEGYKALASALRSNPSHLI 2502
Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+++L N+ G +LV+ M+ ++ LK + + EE + + ++ K
Sbjct: 2503 ELDLRGNDPGQSGVKELVE-MQQRSSLKTLRFFQGP-AEETYQYLIRVFK 2550
Score = 116 (45.9 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 49/189 (25%), Positives = 87/189 (46%)
Query: 269 ITGCKLLSKALHDCYESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKK-LKTLERV 326
+ +LL + E K +P+ LK+ + L E LA+V + +L+ +
Sbjct: 2052 LNNSRLLDSGVRVICEGLK---NPVCELKILKLSKCNLTEESCSALASVLRSDSSSLKDL 2108
Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
++ N + G+ L+D + +K L LNL+D +I+ +G L AL PS ++ L D
Sbjct: 2109 DLSNNNLQDSGVKLLTDGLKHSK-LEKLNLSDCSISEEGYKALASALGSNPS-HLIEL-D 2165
Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM--KNKTKLKQINVSENQ 444
G S + + LTD L ++ L +V VK + KN LK +N+S ++
Sbjct: 2166 LRGNDPGQSGVQE-LTD-VKLNNLTLKFLSPAVDEVCQFVKGIVGKNILLLKDLNLSGHK 2223
Query: 445 FGEEGVEEM 453
+ V ++
Sbjct: 2224 LDFKKVSQL 2232
Score = 115 (45.5 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 221 LKTG-ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK+ + L ELDLS+N V L D+L+ S C GC ++ AL
Sbjct: 2780 LKSNPSHLRELDLSENQIKNRAVNLLCDVLKDSHCKLETLRLRCCSLTD-EGCSAVTSAL 2838
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGI 338
+ +P L+ + +L + G L + K ++ L+++ + I
Sbjct: 2839 ---------KSNPSHLRELDLSQIKLGDSGVNNLFDLLKNPQSKLDKLHLCGCSITEEKC 2889
Query: 339 TALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASS 396
L+ A + N +LR LNL+ N I G L L L L+L DC + SS
Sbjct: 2890 EILTSALKSNPSHLRELNLSQNQIRNTGVNLLCDLLKDSHCKLETLSLHDCGITDV--SS 2947
Query: 397 IAKYLTDNTTLE---DVNLTCNEISVQGGLDLVKAMKNKT---KLKQINVSENQFG 446
+A+ LTD L+ +++L+ N + L+ AM++ T KLK +++ G
Sbjct: 2948 LAQCLTDTKALQFLKELDLSNNNLE-DSEKKLIDAMQDSTCNLKLKSEETAKSTGG 3002
Score = 115 (45.5 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 33/121 (27%), Positives = 62/121 (51%)
Query: 28 TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
+ L+ +NK L+ ++LN + + G + + L K SL ILNL DC + G ++A
Sbjct: 2433 SVLATVLSKNKLLKEMDLNSSPLLDSGVKKICEGLKK-SSLKILNLSDCSISEEGYKALA 2491
Query: 88 KYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
L N + L +++L N+ G +LV+ M+ ++ LK + + EE + + ++
Sbjct: 2492 SALRSNPSHLIELDLRGNDPGQSGVKELVE-MQQRSSLKTLRFFQGP-AEETYQYLIRVF 2549
Query: 147 K 147
K
Sbjct: 2550 K 2550
Score = 112 (44.5 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 39/149 (26%), Positives = 75/149 (50%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQA 61
AA+ L+ +++ + + G+ S FE + +L LNLN +I G L A
Sbjct: 948 AALNLNPSNLKDLDLSKTNLGDSGMKIFSTLFENQQCRLEKLNLNGVSIGEAGCAALASA 1007
Query: 62 LSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMK 119
+ PS + L+L L +G + I+ L ++ TL+ + ++ IS +G L A++
Sbjct: 1008 FNLNPSKVKELDLSRNQLGDSGVTQISALLENSQCTLQILRMSDCSISEEGYKALASALR 1067
Query: 120 -NKTKLKQINVSENQFGEEGVEEMEKLMK 147
N + L ++++ N G+ GV+E+ L++
Sbjct: 1068 SNPSHLIELDLRGNDPGQSGVKELTDLLQ 1096
Score = 112 (44.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 38/144 (26%), Positives = 68/144 (47%)
Query: 9 LKTLEHVEMPQNGIYHVGITALSDAFEENKKL-RHLNLNDNTITYKGAIPLGQALS-KLP 66
LKTL + P Y L F++N + + LNLN+ + + L L K
Sbjct: 2528 LKTLRFFQGPAEETYQY----LIRVFKQNPLISKELNLNETKLDLEKVNQLAVLLQDKHF 2583
Query: 67 SLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KL 124
+ L L C L S +A L+ D+++L++++L+ N + G L +KN L
Sbjct: 2584 RINTLQLSKCDLTEESCSVLASVLSSDSSSLKELDLSNNNLQDSGVKQLWNGLKNNNCTL 2643
Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
+++N+S+ EEG + + ++S
Sbjct: 2644 EKLNLSDCSISEEGYKALASALRS 2667
Score = 112 (44.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 55/241 (22%), Positives = 103/241 (42%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+ L EL+LS+N G G+ + LL + C G K L+ AL
Sbjct: 1529 SNLKELNLSENKLGNSGISKICPLLENKQC-GLEKLRLSDCSISEEGYKALASAL----- 1582
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV-----GIT 339
K S L +++ + G N G K L + + ++ + HV GI
Sbjct: 1583 --KSNPSHL-IELDLRG-NDPGQSGVKELTELLQDPLCKAKLRFLSSAADHVCQFVKGIV 1638
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
+ + NL L D T+ K ++ L K+ +L LN+ + + A + A
Sbjct: 1639 GKNPLLLKELNLNDRQLQDTTVK-KLSVLLQDKHCKISTLT-LNISNITEEDCAALTSA- 1695
Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMK 458
++ + + L+++NL+ N++ G + ++NK L+++ +S+ EEG + + +K
Sbjct: 1696 FILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKALASALK 1755
Query: 459 S 459
S
Sbjct: 1756 S 1756
Score = 109 (43.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 44/148 (29%), Positives = 73/148 (49%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
+ +KL EH +P+ + + L+D ++ K+ L LN N I+ + L AL+
Sbjct: 899 LLRKLNLSEHKLVPK--LKELA-PLLAD---KHCKINTLTLNSNNISEEDCHLLKAALNL 952
Query: 65 LPS-LAILNLGDCLLKSAGASSIAKYLTDNTT--LEDVNLTCNEISVQGGLDLVKAMK-N 120
PS L L+L L +G I L +N LE +NL I G L A N
Sbjct: 953 NPSNLKDLDLSKTNLGDSGMK-IFSTLFENQQCRLEKLNLNGVSIGEAGCAALASAFNLN 1011
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
+K+K++++S NQ G+ GV ++ L+++
Sbjct: 1012 PSKVKELDLSRNQLGDSGVTQISALLEN 1039
Score = 107 (42.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 55/241 (22%), Positives = 101/241 (41%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+ L EL+LS N G G+ LL + C G K L+ AL
Sbjct: 1185 SNLKELNLSGNKLGNSGISKFCPLLENKQC-GLEKLRLSDCSISEEGYKALASAL----- 1238
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV-----GIT 339
K S L +++ + G N G K L + + ++ + HV GI
Sbjct: 1239 --KSNPSHL-IELDLRG-NDPGQSGVKELTELLQDPLCKAKLRFLSSAADHVCQFVKGIV 1294
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
+ + NL L D T+ K ++ L K+ +L LN+ + + A + A
Sbjct: 1295 GKNPLLLKELNLNDRQLQDTTVK-KLSVLLQDKHCKISTLT-LNISNITEEDCAALTSA- 1351
Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMK 458
++ + + L+++NL+ N++ G + ++NK L+++ +S+ EEG + + +K
Sbjct: 1352 FILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKALASALK 1411
Query: 459 S 459
S
Sbjct: 1412 S 1412
Score = 106 (42.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 64/240 (26%), Positives = 104/240 (43%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
++L +L LSD + G + LA L+S+ +G K L +
Sbjct: 813 SKLEKLSLSDCSISEDGYKALASALKSNPSHLIELDLRGNDPGQ-SGVKELLDVRQELNH 871
Query: 285 SSKKEG-SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
+ + P A K F N L NE +L +KL E +P+ + + L+D
Sbjct: 872 NLQLRFLGPDAQKAFTDLTNIL-NENPLLL----RKLNLSEHKLVPK--LKELA-PLLAD 923
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLT 402
++ + L LN N I+ + L AL+ PS L L+L L +G I L
Sbjct: 924 ---KHCKINTLTLNSNNISEEDCHLLKAALNLNPSNLKDLDLSKTNLGDSGMK-IFSTLF 979
Query: 403 DNTT--LEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+N LE +NL I G L A N +K+K++++S NQ G+ GV ++ L+++
Sbjct: 980 ENQQCRLEKLNLNGVSIGEAGCAALASAFNLNPSKVKELDLSRNQLGDSGVTQISALLEN 1039
Score = 105 (42.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 55/241 (22%), Positives = 102/241 (42%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+++ ELDLS N G GV ++ LL +S C G K L+ AL
Sbjct: 1013 SKVKELDLSRNQLGDSGVTQISALLENSQCTLQILRMSDCSISE-EGYKALASAL----- 1066
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV-----GIT 339
+ S L +++ + G N G K L + + + + HV GI
Sbjct: 1067 --RSNPSHL-IELDLRG-NDPGQSGVKELTDLLQDPLCKANLRFLSSAADHVCQFVKGIV 1122
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
+ + NL L D T+ K ++ L K+ +L LN+ + + + A
Sbjct: 1123 GKNPLLLKKLNLNDRQLQDTTVK-KLSVLLQDKHCKISTLT-LNISNITEEDCAVLTSA- 1179
Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMK 458
++ + + L+++NL+ N++ G ++NK L+++ +S+ EEG + + +K
Sbjct: 1180 FILNPSNLKELNLSGNKLGNSGISKFCPLLENKQCGLEKLRLSDCSISEEGYKALASALK 1239
Query: 459 S 459
S
Sbjct: 1240 S 1240
Score = 104 (41.7 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 39/159 (24%), Positives = 77/159 (48%)
Query: 305 LENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTIT 362
+ E +L + K + L +++ +N I + + L D +++ L L L ++T
Sbjct: 2768 ITEEQCVILTSALKSNPSHLRELDLSENQIKNRAVNLLCDVLKDSHCKLETLRLRCCSLT 2827
Query: 363 YKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQ 420
+G + AL PS L L+L L +G +++ L + + L+ ++L I+ +
Sbjct: 2828 DEGCSAVTSALKSNPSHLRELDLSQIKLGDSGVNNLFDLLKNPQSKLDKLHLCGCSITEE 2887
Query: 421 GGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLMK 458
L A+K N + L+++N+S+NQ GV + L+K
Sbjct: 2888 KCEILTSALKSNPSHLRELNLSQNQIRNTGVNLLCDLLK 2926
Score = 102 (41.0 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 40/144 (27%), Positives = 71/144 (49%)
Query: 2 LAAVFKK-LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
LA+V + +L+ +++ N + G+ L+D + +K L LNL+D +I+ +G L
Sbjct: 2094 LASVLRSDSSSLKDLDLSNNNLQDSGVKLLTDGLKHSK-LEKLNLSDCSISEEGYKALAS 2152
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-- 118
AL PS ++ L D G S + + LTD L ++ L +V VK +
Sbjct: 2153 ALGSNPS-HLIEL-DLRGNDPGQSGVQE-LTD-VKLNNLTLKFLSPAVDEVCQFVKGIVG 2208
Query: 119 KNKTKLKQINVSENQFGEEGVEEM 142
KN LK +N+S ++ + V ++
Sbjct: 2209 KNILLLKDLNLSGHKLDFKKVSQL 2232
Score = 100 (40.3 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 30/117 (25%), Positives = 62/117 (52%)
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDN 404
+++ L + L +IT + + L AL PS L L+L + +K+ + + L D+
Sbjct: 2753 DKHCKLNTIQLLKCSITEEQCVILTSALKSNPSHLRELDLSENQIKNRAVNLLCDVLKDS 2812
Query: 405 -TTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLMKS 459
LE + L C ++ +G + A+K N + L+++++S+ + G+ GV + L+K+
Sbjct: 2813 HCKLETLRLRCCSLTDEGCSAVTSALKSNPSHLRELDLSQIKLGDSGVNNLFDLLKN 2869
Score = 98 (39.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 35/153 (22%), Positives = 71/153 (46%)
Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFE-EN 348
+PL K +L+ E LA + + K + +++ + + + L+ ++
Sbjct: 2552 NPLISKELNLNETKLDLEKVNQLAVLLQDKHFRINTLQLSKCDLTEESCSVLASVLSSDS 2611
Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTT- 406
+L+ L+L++N + G L L +L LNL DC + G ++A L N +
Sbjct: 2612 SSLKELDLSNNNLQDSGVKQLWNGLKNNNCTLEKLNLSDCSISEEGYKALASALRSNLSH 2671
Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 438
L +++L N+ G +L ++++ TKLK +
Sbjct: 2672 LIELDLRGNDPGQSGVKELTDLLEDRYTKLKTL 2704
Score = 97 (39.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 53/238 (22%), Positives = 99/238 (41%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L ELDLS N G G++ + LL+++ C ++ C + +K + S+
Sbjct: 2272 LKELDLSGNKLGDSGLKNICCLLQNAQC--------KLEKVKLSDCSISAKG-YKALASA 2322
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAF 345
K P +K+ + N + G +F + L+ + + L+DA
Sbjct: 2323 LKSKPPNQIKLDLT-ENYPGSSGLSWFFKLFGGDMSILKNISFLSSSDAVEANEYLTDAL 2381
Query: 346 EENKNL-RHLNLNDNTITYKGAIPLGQALSKLPSLAILN---LGDCLLKSAGASSIAKYL 401
N L L+L+ + L L L S I+ L C + S +A L
Sbjct: 2382 GTNPLLLTELDLSKVKLKDHNWEKLSAFL--LDSCCIVEKIMLNKCEVTKKMCSVLATVL 2439
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ N L++++L + + G + + +K K+ LK +N+S+ EEG + + ++S
Sbjct: 2440 SKNKLLKEMDLNSSPLLDSGVKKICEGLK-KSSLKILNLSDCSISEEGYKALASALRS 2496
Score = 96 (38.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 32/116 (27%), Positives = 61/116 (52%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDN 93
+++ ++ L L+ +T + L LS SL L+L + L+ +G + L +N
Sbjct: 2580 DKHFRINTLQLSKCDLTEESCSVLASVLSSDSSSLKELDLSNNNLQDSGVKQLWNGLKNN 2639
Query: 94 T-TLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLMK 147
TLE +NL+ IS +G L A++ N + L ++++ N G+ GV+E+ L++
Sbjct: 2640 NCTLEKLNLSDCSISEEGYKALASALRSNLSHLIELDLRGNDPGQSGVKELTDLLE 2695
Score = 94 (38.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 305 LENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEE---NKNLRHLN-LNDN 359
+ EG K LA+ K + L +++ N G+ L++ ++ LR L+ D+
Sbjct: 1398 ISEEGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRFLSSAADD 1457
Query: 360 TITY-KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEI 417
+ KG + L K LNL D L+ ++ L D + + + L + I
Sbjct: 1458 VCQFVKGIVGKNPLLLKK-----LNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNI 1512
Query: 418 SVQGGLDLVKA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ + L A + N + LK++N+SEN+ G G+ ++ L+++
Sbjct: 1513 TEEDCAVLTSAFILNPSNLKELNLSENKLGNSGISKICPLLEN 1555
Score = 91 (37.1 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 29/114 (25%), Positives = 61/114 (53%)
Query: 40 LRHLNLND----NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
L+ LNLND +T K ++ L K+ +L LN+ + + A + A ++ + +
Sbjct: 1817 LKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLT-LNISNITEEDCAALTSA-FILNPSN 1874
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMKS 148
L+++NL+ N++ G + ++NK L+++++S+ EEG + + +KS
Sbjct: 1875 LKELNLSGNKLGNSGISKICPLLENKQCGLEKLSLSDCSISEEGYKALASALKS 1928
Score = 91 (37.1 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQALSKLP-SLA 69
LE + + I G AL+ AF N K++ L+L+ N + G + L +L
Sbjct: 986 LEKLNLNGVSIGEAGCAALASAFNLNPSKVKELDLSRNQLGDSGVTQISALLENSQCTLQ 1045
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
IL + DC + G ++A L N + L +++L N+ G +L +++
Sbjct: 1046 ILRMSDCSISEEGYKALASALRSNPSHLIELDLRGNDPGQSGVKELTDLLQD 1097
Score = 90 (36.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 29/114 (25%), Positives = 60/114 (52%)
Query: 40 LRHLNLND----NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
L+ LNLND +T K ++ L K+ +L LN+ + + A + A ++ + +
Sbjct: 1645 LKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLT-LNISNITEEDCAALTSA-FILNPSN 1702
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMKS 148
L+++NL+ N++ G + ++NK L+++ +S+ EEG + + +KS
Sbjct: 1703 LKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKALASALKS 1756
Score = 90 (36.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 29/114 (25%), Positives = 60/114 (52%)
Query: 40 LRHLNLND----NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
L+ LNLND +T K ++ L K+ +L LN+ + + A + A ++ + +
Sbjct: 1301 LKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLT-LNISNITEEDCAALTSA-FILNPSN 1358
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMKS 148
L+++NL+ N++ G + ++NK L+++ +S+ EEG + + +KS
Sbjct: 1359 LKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKALASALKS 1412
Score = 88 (36.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 59/238 (24%), Positives = 98/238 (41%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L ELDLS+N GV+ L + L+++ C G K L+ AL S+
Sbjct: 2614 LKELDLSNNNLQDSGVKQLWNGLKNNNCTLEKLNLSDCSISE-EGYKALASALR----SN 2668
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP--QNGIYHV-GITALSD 343
L L+ G++ ++ E +L + KLKTL R P + +V G+
Sbjct: 2669 LSHLIELDLRGNDPGQSGVK-ELTDLLEDRYTKLKTL-RFLSPDAEKACKYVPGLVGKDP 2726
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
NLR L D I Y A+ L KL ++ +L C + + L
Sbjct: 2727 FLVRELNLRDQKLGDTNIKYLAAL-LQDKHCKLNTIQLLK---CSITEEQCVILTSALKS 2782
Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMKS 459
N + L +++L+ N+I + L +K+ KL+ + + +EG + +KS
Sbjct: 2783 NPSHLRELDLSENQIKNRAVNLLCDVLKDSHCKLETLRLRCCSLTDEGCSAVTSALKS 2840
Score = 87 (35.7 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 39/150 (26%), Positives = 72/150 (48%)
Query: 2 LAAVFKK-LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
LA+V + +L+ +++ N + G+ LSD + +K L L+L+D +I+ G L
Sbjct: 777 LASVLRSDSSSLKDLDLSNNNLQDSGVKLLSDGLKHSK-LEKLSLSDCSISEDGYKALAS 835
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS--VQGGL-DLVKA 117
AL PS ++ L D G S + + L L NL + Q DL
Sbjct: 836 ALKSNPS-HLIEL-DLRGNDPGQSGVKELLDVRQELNH-NLQLRFLGPDAQKAFTDLTNI 892
Query: 118 M-KNKTKLKQINVSENQFGEEGVEEMEKLM 146
+ +N L+++N+SE++ + ++E+ L+
Sbjct: 893 LNENPLLLRKLNLSEHKLVPK-LKELAPLL 921
Score = 87 (35.7 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 32/121 (26%), Positives = 53/121 (43%)
Query: 29 ALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSI 86
AL+ AF N L+ LNL+ N + G + L +K L L+L DC + G ++
Sbjct: 1863 ALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLSLSDCSISEEGYKAL 1922
Query: 87 AKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 145
A L N + L +++L N+ G +L + + K I EE + K+
Sbjct: 1923 ASALKSNPSHLIELDLRGNDPGQSGVKELTDLSQYRCKTLTIRFLSGSGAEEACAHLTKV 1982
Query: 146 M 146
+
Sbjct: 1983 V 1983
Score = 86 (35.3 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 29/104 (27%), Positives = 53/104 (50%)
Query: 45 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 104
LN +T K L LSK L ++L L +G I + L ++L+ +NL+
Sbjct: 2422 LNKCEVTKKMCSVLATVLSKNKLLKEMDLNSSPLLDSGVKKICEGLK-KSSLKILNLSDC 2480
Query: 105 EISVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLMK 147
IS +G L A++ N + L ++++ N G+ GV+E+ ++ +
Sbjct: 2481 SISEEGYKALASALRSNPSHLIELDLRGNDPGQSGVKELVEMQQ 2524
Score = 86 (35.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNT 94
++ L+ L+L++N + G L L +L LNL DC + G ++A L N
Sbjct: 2610 DSSSLKELDLSNNNLQDSGVKQLWNGLKNNNCTLEKLNLSDCSISEEGYKALASALRSNL 2669
Query: 95 T-LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQI 127
+ L +++L N+ G +L ++++ TKLK +
Sbjct: 2670 SHLIELDLRGNDPGQSGVKELTDLLEDRYTKLKTL 2704
Score = 85 (35.0 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 21/77 (27%), Positives = 45/77 (58%)
Query: 73 LGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
L C L S++A L +D+++L+D++L+ N + G L +K+ +KL+++++S+
Sbjct: 764 LSKCNLTEESCSALASVLRSDSSSLKDLDLSNNNLQDSGVKLLSDGLKH-SKLEKLSLSD 822
Query: 132 NQFGEEGVEEMEKLMKS 148
E+G + + +KS
Sbjct: 823 CSISEDGYKALASALKS 839
Score = 84 (34.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 28/114 (24%), Positives = 59/114 (51%)
Query: 40 LRHLNLND----NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
L+ LNLND +T K ++ L K+ +L LN+ + + + A ++ + +
Sbjct: 1473 LKKLNLNDRQLQDTTVKKLSVLLQDKHCKISTLT-LNISNITEEDCAVLTSA-FILNPSN 1530
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMKS 148
L+++NL+ N++ G + ++NK L+++ +S+ EEG + + +KS
Sbjct: 1531 LKELNLSENKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKALASALKS 1584
Score = 84 (34.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 37/155 (23%), Positives = 72/155 (46%)
Query: 2 LAAVFKKLKT-LEHVEMPQNGIYHVGITALSDAFEE---NKKLRHLN-LNDNTITY-KGA 55
LA+ K + L +++ N G+ L++ ++ KLR L+ D+ + KG
Sbjct: 1406 LASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRFLSSAADDVCQFVKGI 1465
Query: 56 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDL 114
+ L K LNL D L+ ++ L D + + + L + I+ + L
Sbjct: 1466 VGKNPLLLKK-----LNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEEDCAVL 1520
Query: 115 VKA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
A + N + LK++N+SEN+ G G+ ++ L+++
Sbjct: 1521 TSAFILNPSNLKELNLSENKLGNSGISKICPLLEN 1555
Score = 83 (34.3 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 28/114 (24%), Positives = 58/114 (50%)
Query: 40 LRHLNLND----NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
L+ LNLND +T K ++ L K+ +L LN+ + + + A ++ + +
Sbjct: 1129 LKKLNLNDRQLQDTTVKKLSVLLQDKHCKISTLT-LNISNITEEDCAVLTSA-FILNPSN 1186
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMKS 148
L+++NL+ N++ G ++NK L+++ +S+ EEG + + +KS
Sbjct: 1187 LKELNLSGNKLGNSGISKFCPLLENKQCGLEKLRLSDCSISEEGYKALASALKS 1240
Score = 83 (34.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 58/251 (23%), Positives = 96/251 (38%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+ L+ELDL N G GV+ L D+ ++ + G ++ K +
Sbjct: 2159 SHLIELDLRGNDPGQSGVQELTDVKLNNLTLKFLSPAVDEVCQFVKG--IVGKNI----- 2211
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAV-FKKLKTLERVEMPQNGIYHVGITALSD 343
L LK ++L+ + LAAV K L +++ I G AL+
Sbjct: 2212 --------LLLKDLNLSGHKLDFKKVSQLAAVVLDKHCKLNTIQLNNTSISEEGCAALTS 2263
Query: 344 AFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYL 401
AF N +L+ L+L+ N + G + L L + L DC + + G ++A L
Sbjct: 2264 AFISNPLHLKELDLSGNKLGDSGLKNICCLLQNAQCKLEKVKLSDCSISAKGYKALASAL 2323
Query: 402 TDNTTLE-DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
+ ++LT N G K + + N+S + VE E L +
Sbjct: 2324 KSKPPNQIKLDLTENYPGSSGLSWFFKLFGGDMSILK-NISFLS-SSDAVEANEYLTDAL 2381
Query: 461 GMAAALVLEDD 471
G L+ E D
Sbjct: 2382 GTNPLLLTELD 2392
Score = 81 (33.6 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 29 ALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSI 86
AL+ AF N L+ LNL+ N + G + L +K L L L DC + G ++
Sbjct: 1691 ALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKAL 1750
Query: 87 AKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 125
A L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1751 ASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1793
Score = 81 (33.6 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 29 ALSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSI 86
AL+ AF N L+ LNL+ N + G + L +K L L L DC + G ++
Sbjct: 1347 ALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKAL 1406
Query: 87 AKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 125
A L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1407 ASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1449
Score = 80 (33.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 30 LSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIA 87
L+ AF N L+ LNL++N + G + L +K L L L DC + G ++A
Sbjct: 1520 LTSAFILNPSNLKELNLSENKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKALA 1579
Query: 88 KYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 125
L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1580 SALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1621
Score = 79 (32.9 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 94
+ + K+ + LN+ +T K L LS +L LNL + L +G I + L +
Sbjct: 2014 DSHSKVEKMKLNNCELTEKSCPVLAAVLSSKTNLKELNLNNSRLLDSGVRVICEGLKNPV 2073
Query: 95 T-LEDVNLT-CNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVE 140
L+ + L+ CN ++ + L +++ + LK +++S N + GV+
Sbjct: 2074 CELKILKLSKCN-LTEESCSALASVLRSDSSSLKDLDLSNNNLQDSGVK 2121
Score = 78 (32.5 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 22/112 (19%), Positives = 58/112 (51%)
Query: 40 LRHLNLNDNTITYKGAIPLGQA-LSKLPSLAILNLGDCLLKSAGASSIAK-YLTDNTTLE 97
L+ LNL+ + + +K L L K L + L + + G +++ ++++ L+
Sbjct: 2214 LKDLNLSGHKLDFKKVSQLAAVVLDKHCKLNTIQLNNTSISEEGCAALTSAFISNPLHLK 2273
Query: 98 DVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEMEKLMKS 148
+++L+ N++ G ++ ++N + KL+++ +S+ +G + + +KS
Sbjct: 2274 ELDLSGNKLGDSGLKNICCLLQNAQCKLEKVKLSDCSISAKGYKALASALKS 2325
Score = 77 (32.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 2 LAAVFKKLKT-LEHVEMPQNGIYHVGITALSDAFEE---NKKLRHLN-LNDNTITY-KGA 55
LA+ K + L +++ N G+ L++ ++ KLR L+ D+ + KG
Sbjct: 1750 LASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRFLSSAADDVCQFVKGI 1809
Query: 56 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDL 114
+ L K LNL D L+ ++ L D + + + L + I+ + L
Sbjct: 1810 VGKNPLLLKE-----LNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEEDCAAL 1864
Query: 115 VKA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
A + N + LK++N+S N+ G G+ ++ L+++
Sbjct: 1865 TSAFILNPSNLKELNLSGNKLGNSGISKICPLLEN 1899
Score = 77 (32.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 2 LAAVFKKLKT-LEHVEMPQNGIYHVGITALSDAFEE---NKKLRHLN-LNDNTITY-KGA 55
LA+ K + L +++ N G+ L++ ++ KLR L+ D+ + KG
Sbjct: 1578 LASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRFLSSAADHVCQFVKGI 1637
Query: 56 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDL 114
+ L K LNL D L+ ++ L D + + + L + I+ + L
Sbjct: 1638 VGKNPLLLKE-----LNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEEDCAAL 1692
Query: 115 VKA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
A + N + LK++N+S N+ G G+ ++ L+++
Sbjct: 1693 TSAFILNPSNLKELNLSGNKLGNSGISKICPLLEN 1727
Score = 77 (32.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 2 LAAVFKKLKT-LEHVEMPQNGIYHVGITALSDAFEE---NKKLRHLN-LNDNTITY-KGA 55
LA+ K + L +++ N G+ L++ ++ KLR L+ D+ + KG
Sbjct: 1234 LASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRFLSSAADHVCQFVKGI 1293
Query: 56 IPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDL 114
+ L K LNL D L+ ++ L D + + + L + I+ + L
Sbjct: 1294 VGKNPLLLKE-----LNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEEDCAAL 1348
Query: 115 VKA-MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
A + N + LK++N+S N+ G G+ ++ L+++
Sbjct: 1349 TSAFILNPSNLKELNLSGNKLGNSGISKICPLLEN 1383
Score = 75 (31.5 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 29/102 (28%), Positives = 48/102 (47%)
Query: 30 LSDAFEEN-KKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIA 87
L+ AF N L+ LNL+ N + G L +K L L L DC + G ++A
Sbjct: 1176 LTSAFILNPSNLKELNLSGNKLGNSGISKFCPLLENKQCGLEKLRLSDCSISEEGYKALA 1235
Query: 88 KYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 125
L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1236 SALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1277
Score = 75 (31.5 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 73 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
L C + S +A L+ N L++++L + + G + + +K K+ LK +N+S+
Sbjct: 2422 LNKCEVTKKMCSVLATVLSKNKLLKEMDLNSSPLLDSGVKKICEGLK-KSSLKILNLSDC 2480
Query: 133 QFGEEGVEEMEKLMKS 148
EEG + + ++S
Sbjct: 2481 SISEEGYKALASALRS 2496
Score = 75 (31.5 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 26 GITALSDAFEENKKLRHLN-LNDNTITY-KGAIPLGQALSKLPSLAILNLGDCLLKSAGA 83
G+ L+D N L+ L+ D + KG + G+ + L L NL L
Sbjct: 2175 GVQELTDVKLNNLTLKFLSPAVDEVCQFVKGIV--GKNILLLKDL---NLSGHKLDFKKV 2229
Query: 84 SSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKA-MKNKTKLKQINVSENQFGEEGVEE 141
S +A + D + L + L IS +G L A + N LK++++S N+ G+ G++
Sbjct: 2230 SQLAAVVLDKHCKLNTIQLNNTSISEEGCAALTSAFISNPLHLKELDLSGNKLGDSGLKN 2289
Query: 142 MEKLMKS 148
+ L+++
Sbjct: 2290 ICCLLQN 2296
Score = 74 (31.1 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 31/130 (23%), Positives = 59/130 (45%)
Query: 26 GITALSDAFEE---NKKLRHLN-LNDNTITY-KGAIPLGQALSKLPSLAILNLGDCLLKS 80
G+ L+D ++ LR L+ D+ + KG + L K LNL D L+
Sbjct: 1087 GVKELTDLLQDPLCKANLRFLSSAADHVCQFVKGIVGKNPLLLKK-----LNLNDRQLQD 1141
Query: 81 AGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKA-MKNKTKLKQINVSENQFGEEG 138
++ L D + + + L + I+ + L A + N + LK++N+S N+ G G
Sbjct: 1142 TTVKKLSVLLQDKHCKISTLTLNISNITEEDCAVLTSAFILNPSNLKELNLSGNKLGNSG 1201
Query: 139 VEEMEKLMKS 148
+ + L+++
Sbjct: 1202 ISKFCPLLEN 1211
Score = 70 (29.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 31/139 (22%), Positives = 67/139 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQAL-SKLPSLA 69
L+ +++ N + G+ + + + KL + L+D +I+ KG L AL SK P+
Sbjct: 2272 LKELDLSGNKLGDSGLKNICCLLQNAQCKLEKVKLSDCSISAKGYKALASALKSKPPNQI 2331
Query: 70 ILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQI 127
L+L + S+G S K D + L++++ + +V+ L A+ N L ++
Sbjct: 2332 KLDLTENYPGSSGLSWFFKLFGGDMSILKNISFLSSSDAVEANEYLTDALGTNPLLLTEL 2391
Query: 128 NVSENQFGEEGVEEMEKLM 146
++S+ + + E++ +
Sbjct: 2392 DLSKVKLKDHNWEKLSAFL 2410
Score = 66 (28.3 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 29/141 (20%), Positives = 62/141 (43%)
Query: 2 LAAVFKKLKT-LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
LA+ K + L +++ N G+ L+D + K + + + L +
Sbjct: 1922 LASALKSNPSHLIELDLRGNDPGQSGVKELTDLSQYRCKTLTIRFLSGSGAEEACAHLTK 1981
Query: 61 ALSKLPSLAI-LNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAM 118
+ P L L+L + LK ++ L D+ + +E + L E++ + L +
Sbjct: 1982 VVGISPLLLTELDLNEDKLKDLDGEKLSALLMDSHSKVEKMKLNNCELTEKSCPVLAAVL 2041
Query: 119 KNKTKLKQINVSENQFGEEGV 139
+KT LK++N++ ++ + GV
Sbjct: 2042 SSKTNLKELNLNNSRLLDSGV 2062
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 38/192 (19%), Positives = 83/192 (43%)
Query: 274 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNG 332
LL + E KK +LK+ + EG K LA+ + + L +++ N
Sbjct: 2455 LLDSGVKKICEGLKKS----SLKILNLSDCSISEEGYKALASALRSNPSHLIELDLRGND 2510
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTI--TYKGAIPLGQALSKLPSLAI-LNLGDCLL 389
G+ L + ++ +L+ L TY+ I + + P ++ LNL + L
Sbjct: 2511 PGQSGVKELVE-MQQRSSLKTLRFFQGPAEETYQYLI---RVFKQNPLISKELNLNETKL 2566
Query: 390 KSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGE 447
+ +A L D + + + L+ +++ + L + + + LK++++S N +
Sbjct: 2567 DLEKVNQLAVLLQDKHFRINTLQLSKCDLTEESCSVLASVLSSDSSSLKELDLSNNNLQD 2626
Query: 448 EGVEEMEKLMKS 459
GV+++ +K+
Sbjct: 2627 SGVKQLWNGLKN 2638
Score = 55 (24.4 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLL 249
+ L+ELDL N G GV+ L DLL
Sbjct: 2670 SHLIELDLRGNDPGQSGVKELTDLL 2694
Score = 48 (22.0 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 221 LKTG-ARLVELDLSDNAFGPIGVEGLADL 248
LK+ + L+ELDL N G GV+ L D+
Sbjct: 837 LKSNPSHLIELDLRGNDPGQSGVKELLDV 865
Score = 47 (21.6 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSS 252
+ L+ELDL N G GV+ L ++ + S
Sbjct: 2499 SHLIELDLRGNDPGQSGVKELVEMQQRS 2526
Score = 40 (19.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 69 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
AIL+LG SS+ Y TD L+ + ++ SV G+ + K +T
Sbjct: 494 AILSLGKLAFHQLQNSSLIFYDTD---LKACGIDVHKASVYSGM-CTQIFKEET 543
Score = 40 (19.1 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSS 252
L+LSD + G + LA LRS+
Sbjct: 2475 LNLSDCSISEEGYKALASALRSN 2497
Score = 39 (18.8 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSS 252
++L +L+LSD + G + LA L S+
Sbjct: 2130 SKLEKLNLSDCSISEEGYKALASALGSN 2157
>MGI|MGI:1919077 [details] [associations]
symbol:Lrrc34 "leucine rich repeat containing 34"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1919077
CTD:151827 eggNOG:NOG309390 HOGENOM:HOG000007976 HOVERGEN:HBG080754
EMBL:AK005720 EMBL:BC100519 IPI:IPI00118820 RefSeq:NP_082217.1
UniGene:Mm.45373 ProteinModelPortal:Q9DAM1 SMR:Q9DAM1
PhosphoSite:Q9DAM1 PaxDb:Q9DAM1 PRIDE:Q9DAM1
Ensembl:ENSMUST00000029252 GeneID:71827 KEGG:mmu:71827
GeneTree:ENSGT00640000091171 InParanoid:Q9DAM1 OMA:HNRSLKA
OrthoDB:EOG4H9XM3 NextBio:334616 Bgee:Q9DAM1 CleanEx:MM_LRRC34
Genevestigator:Q9DAM1 GermOnline:ENSMUSG00000027702 Uniprot:Q9DAM1
Length = 415
Score = 156 (60.0 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 42/155 (27%), Positives = 82/155 (52%)
Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
+ E + + K+ L + M ++G+ + G+ L +A N +LR+L+++ N IT G
Sbjct: 202 QEESTVHIGHMLKENHVLVELHMCKHGMKNYGLQQLCNALYLNSSLRYLDVSCNKITRDG 261
Query: 366 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLD 424
+ L L +L +L+L +++AGA +++ LT N +L+ +++ N+I +G +
Sbjct: 262 MVFLADVLKSNTTLEVLDLSFNRIETAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVA 321
Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
L ++MK L I + N+F E+ L+KS
Sbjct: 322 LSQSMKTNLVLSNIYIWGNKFDEDTCVAYSDLIKS 356
Score = 152 (58.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 41/145 (28%), Positives = 78/145 (53%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
+ K+ L + M ++G+ + G+ L +A N LR+L+++ N IT G + L L
Sbjct: 212 MLKENHVLVELHMCKHGMKNYGLQQLCNALYLNSSLRYLDVSCNKITRDGMVFLADVLKS 271
Query: 65 LPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
+L +L+L +++AGA +++ LT N +L+ +++ N+I +G + L ++MK
Sbjct: 272 NTTLEVLDLSFNRIETAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVALSQSMKTNLV 331
Query: 124 LKQINVSENQFGEEGVEEMEKLMKS 148
L I + N+F E+ L+KS
Sbjct: 332 LSNIYIWGNKFDEDTCVAYSDLIKS 356
Score = 100 (40.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
A + +K ++ ++ + N I G ++ A +NK L++L + N I G + L
Sbjct: 95 AKLLQKQPSITYLNLMFNDIGPEGGELIAKALHKNKTLKYLRMTGNKIENTGGMLFAAML 154
Query: 63 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
SL L+LGDC L + + LT N ++ +NL
Sbjct: 155 QMNSSLEKLDLGDCDLGLQCVIAFSTVLTQNQAIKGINL 193
Score = 99 (39.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
++A K KTL+++ M N I + G + + N L L+L D + + I
Sbjct: 121 LIAKALHKNKTLKYLRMTGNKIENTGGMLFAAMLQMNSSLEKLDLGDCDLGLQCVIAFST 180
Query: 61 ALSKLPSLAILNLGDCLLKSAGASS---IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
L++ ++ +NL +L S I L +N L ++++ + + G L A
Sbjct: 181 VLTQNQAIKGINLNRPILYGEQEESTVHIGHMLKENHVLVELHMCKHGMKNYGLQQLCNA 240
Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
+ + L+ ++VS N+ +G+ + ++KS
Sbjct: 241 LYLNSSLRYLDVSCNKITRDGMVFLADVLKS 271
Score = 93 (37.8 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
LS + +++ N I GA + L K PS+ LNL + G IAK
Sbjct: 66 LSKTLRNQPCISGVDVRYNLIGDVGAFYAAKLLQKQPSITYLNLMFNDIGPEGGELIAKA 125
Query: 90 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
L N TL+ + +T N+I GG+ ++ + L+++++ + G
Sbjct: 126 LHKNKTLKYLRMTGNKIENTGGMLFAAMLQMNSSLEKLDLGDCDLG 171
Score = 84 (34.6 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
L + L P ++ +++ L+ GA AK L ++ +NL N+I +GG + KA
Sbjct: 66 LSKTLRNQPCISGVDVRYNLIGDVGAFYAAKLLQKQPSITYLNLMFNDIGPEGGELIAKA 125
Query: 118 M-KNKTKLKQINVSENQFGEEG 138
+ KNKT LK + ++ N+ G
Sbjct: 126 LHKNKT-LKYLRMTGNKIENTG 146
Score = 81 (33.6 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 31/135 (22%), Positives = 63/135 (46%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
++ ++N G + L +L +++ N I G+ L+D + N L L+L+ N I
Sbjct: 226 KHGMKNYGLQQLCNALYLNSSLRYLDVSCNKITRDGMVFLADVLKSNTTLEVLDLSFNRI 285
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
GA L + L S SL L++ ++ G ++++ + N L ++ + N+
Sbjct: 286 ETAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVALSQSMKTNLVLSNIYIWGNKFDED 345
Query: 421 GGL---DLVKAMKNK 432
+ DL+K+ + K
Sbjct: 346 TCVAYSDLIKSGRLK 360
Score = 64 (27.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENK 349
S L+V NR+E GAK L+ ++L+ + + N I G+ ALS + + N
Sbjct: 271 SNTTLEVLDLSFNRIETAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVALSQSMKTNL 330
Query: 350 NLRHLNL------NDNTITYKGAIPLGQ 371
L ++ + D + Y I G+
Sbjct: 331 VLSNIYIWGNKFDEDTCVAYSDLIKSGR 358
Score = 40 (19.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
L K ++N+ + ++V N G+ G KL++
Sbjct: 66 LSKTLRNQPCISGVDVRYNLIGDVGAFYAAKLLQ 99
>UNIPROTKB|P10775 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 InterPro:IPR025875 Pfam:PF12799
InterPro:IPR003590 SMART:SM00368 HOVERGEN:HBG001059 EMBL:M58700
PIR:A31857 UniGene:Ssc.6413 PDB:1DFJ PDB:2BNH PDBsum:1DFJ
PDBsum:2BNH ProteinModelPortal:P10775 SMR:P10775 IntAct:P10775
PRIDE:P10775 EvolutionaryTrace:P10775 Uniprot:P10775
Length = 456
Score = 159 (61.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 65/235 (27%), Positives = 112/235 (47%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
A L ELDL N G G+ L L S +GC+ L + L +
Sbjct: 222 ASLRELDLGSNGLGDAGIAELCPGLLSPAS-RLKTLWLWECDITASGCRDLCRVLQA--K 278
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSD 343
+ KE S +AG N+L +EGA++L ++ + LE + + + +S
Sbjct: 279 ETLKELS-------LAG-NKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSL 330
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKL-PSLAILNLGDCLLKSAGASSIAKYLT 402
+NK+L L L+ N + G L QALS+ +L +L LGDC + ++G SS+A L
Sbjct: 331 MLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLL 390
Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKL 456
N +L +++L+ N + G L L+ +++ L+Q+ + + + EE + ++ L
Sbjct: 391 ANRSLRELDLSNNCVGDPGVLQLLGSLEQPGCALEQLVLYDTYWTEEVEDRLQAL 445
Score = 125 (49.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 35/112 (31%), Positives = 63/112 (56%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNT 94
+NK L L L+ N + G L QALS+ +L +L LGDC + ++G SS+A L N
Sbjct: 334 QNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANR 393
Query: 95 TLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKL 145
+L +++L+ N + G L L+ +++ L+Q+ + + + EE + ++ L
Sbjct: 394 SLRELDLSNNCVGDPGVLQLLGSLEQPGCALEQLVLYDTYWTEEVEDRLQAL 445
Score = 100 (40.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 48/211 (22%), Positives = 84/211 (39%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L++ L EL LSDN G G+ L + L C + C+L + +
Sbjct: 104 LRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQ--------LEYCRLTAAS-- 153
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGIT 339
C + + ALK N + GA++L + LE + + G+
Sbjct: 154 -CEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCK 212
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIA 398
L +LR L+L N + G L L S L L L +C + ++G +
Sbjct: 213 DLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLC 272
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+ L TL++++L N++ +G L +++
Sbjct: 273 RVLQAKETLKELSLAGNKLGDEGARLLCESL 303
Score = 99 (39.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 52/241 (21%), Positives = 97/241 (40%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L+ L EL +S+N G G L L S C + C L
Sbjct: 161 LRATRALKELTVSNNDIGEAGARVLGQGLADSAC--------QLETLRLENCGLTPA--- 209
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEG-AKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
+C + S +L+ G N L + G A++ + L+ + + + I G
Sbjct: 210 NCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCR 269
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSI 397
L + + L+ L+L N + +GA L ++L + P + +L C L +A +
Sbjct: 270 DLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQ-PGCQLESLWVKSCSLTAACCQHV 328
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKL 456
+ LT N L ++ L+ N++ G +L +A+ T L+ + + + + G + L
Sbjct: 329 SLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASL 388
Query: 457 M 457
+
Sbjct: 389 L 389
Score = 98 (39.6 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
K++ L+L + ++T G L L LP+L L+L D L AG + + L D LE
Sbjct: 81 KIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLE 140
Query: 98 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
+ L ++ L ++ LK++ VS N GE G
Sbjct: 141 KLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAG 181
Score = 78 (32.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/165 (22%), Positives = 71/165 (43%)
Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRHLNLNDNTITYKGAI 367
G + L V + +TL+ + + N + G L ++ + L L + ++T
Sbjct: 267 GCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQ 326
Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLV 426
+ L++ L L L L +G + + L+ TTL + L E++ G L
Sbjct: 327 HVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLA 386
Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA-LVLED 470
+ L+++++S N G+ GV ++ ++ G A LVL D
Sbjct: 387 SLLLANRSLRELDLSNNCVGDPGVLQLLGSLEQPGCALEQLVLYD 431
Score = 70 (29.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNL 101
+ L+D +T + +G AL PSL L L L AG + + L T ++ ++L
Sbjct: 28 VRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSL 87
Query: 102 -TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
C+ G+ L +++ L+++++S+N G+ G+
Sbjct: 88 QNCSLTEAGCGV-LPSTLRSLPTLRELHLSDNPLGDAGL 125
Score = 65 (27.9 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAM 118
+ L L ++ L DC L I L N +L ++ L NE+ G+ LV + +
Sbjct: 17 ELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELG-DAGVHLVLQGL 75
Query: 119 KNKT-KLKQINVSENQFGEEGVEEMEKLMKS 148
++ T K++++++ E G + ++S
Sbjct: 76 QSPTCKIQKLSLQNCSLTEAGCGVLPSTLRS 106
Score = 63 (27.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 26/95 (27%), Positives = 39/95 (41%)
Query: 19 QN-GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGD 75
QN + G L LR L+L+DN + G L + L P L L L
Sbjct: 88 QNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLD-PQCHLEKLQLEY 146
Query: 76 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
C L +A +A L L+++ ++ N+I G
Sbjct: 147 CRLTAASCEPLASVLRATRALKELTVSNNDIGEAG 181
>RGD|1565052 [details] [associations]
symbol:Lrrc34 "leucine rich repeat containing 34" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] RGD:1565052 CTD:151827
eggNOG:NOG309390 HOGENOM:HOG000007976 HOVERGEN:HBG080754
OrthoDB:EOG4H9XM3 EMBL:BC097432 IPI:IPI00372167
RefSeq:NP_001038161.1 UniGene:Rn.30636 ProteinModelPortal:Q4V8D9
PhosphoSite:Q4V8D9 GeneID:499589 KEGG:rno:499589 UCSC:RGD:1565052
InParanoid:Q4V8D9 NextBio:703364 Genevestigator:Q4V8D9
Uniprot:Q4V8D9
Length = 415
Score = 152 (58.6 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 41/155 (26%), Positives = 80/155 (51%)
Query: 306 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
+ E + + K+ L + M ++G+ + GI L +A N LR+L+++ N IT G
Sbjct: 202 QEESTVHIGHMSKQNHVLVELHMCKHGMKNYGIQQLCNALHSNSTLRYLDVSCNKITRDG 261
Query: 366 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLD 424
+ L L +L +L+L +++AGA +++ LT N +L+ +++ N+I +G +
Sbjct: 262 MVFLADVLKSNSTLEVLDLSFNRIENAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVA 321
Query: 425 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
L ++M L I + N+F E+ L++S
Sbjct: 322 LSQSMNTNLVLSNIYIWGNKFDEDTCVAYSNLIES 356
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/143 (27%), Positives = 76/143 (53%)
Query: 7 KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP 66
K+ L + M ++G+ + GI L +A N LR+L+++ N IT G + L L
Sbjct: 214 KQNHVLVELHMCKHGMKNYGIQQLCNALHSNSTLRYLDVSCNKITRDGMVFLADVLKSNS 273
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
+L +L+L +++AGA +++ LT N +L+ +++ N+I +G + L ++M L
Sbjct: 274 TLEVLDLSFNRIENAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVALSQSMNTNLVLS 333
Query: 126 QINVSENQFGEEGVEEMEKLMKS 148
I + N+F E+ L++S
Sbjct: 334 NIYIWGNKFDEDTCVAYSNLIES 356
Score = 104 (41.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
A + +K + ++ + N I G ++ A ++NK L++L + N I G + L
Sbjct: 95 AKLLQKQPNITYLNLMFNDIGPEGGELIAKALQKNKTLKYLRMTGNKIENTGGMLFAAML 154
Query: 63 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 101
SL L+LGDC L + + LT N ++ +NL
Sbjct: 155 QMNSSLEKLDLGDCDLGLQSVIAFSTVLTQNKAIKGINL 193
Score = 100 (40.3 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 33/151 (21%), Positives = 69/151 (45%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
++A +K KTL+++ M N I + G + + N L L+L D + + I
Sbjct: 121 LIAKALQKNKTLKYLRMTGNKIENTGGMLFAAMLQMNSSLEKLDLGDCDLGLQSVIAFST 180
Query: 61 ALSKLPSLAILNLGDCLLKSAGASS---IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
L++ ++ +NL +L S I N L ++++ + + G L A
Sbjct: 181 VLTQNKAIKGINLNRPILYGEQEESTVHIGHMSKQNHVLVELHMCKHGMKNYGIQQLCNA 240
Query: 118 MKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
+ + + L+ ++VS N+ +G+ + ++KS
Sbjct: 241 LHSNSTLRYLDVSCNKITRDGMVFLADVLKS 271
Score = 97 (39.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
LS A + + +++ N I GA + L K P++ LNL + G IAK
Sbjct: 66 LSKALRNHPCIGGVDVRYNLIGDVGAYYAAKLLQKQPNITYLNLMFNDIGPEGGELIAKA 125
Query: 90 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
L N TL+ + +T N+I GG+ ++ + L+++++ + G + V
Sbjct: 126 LQKNKTLKYLRMTGNKIENTGGMLFAAMLQMNSSLEKLDLGDCDLGLQSV 175
Score = 89 (36.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 28/116 (24%), Positives = 55/116 (47%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
++ ++N G + L TL +++ N I G+ L+D + N L L+L+ N I
Sbjct: 226 KHGMKNYGIQQLCNALHSNSTLRYLDVSCNKITRDGMVFLADVLKSNSTLEVLDLSFNRI 285
Query: 362 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 416
GA L + L S SL L++ ++ G ++++ + N L ++ + N+
Sbjct: 286 ENAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVALSQSMNTNLVLSNIYIWGNK 341
Score = 69 (29.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
L+V NR+EN GAK L+ ++L+ + + N I G+ ALS + N L +
Sbjct: 275 LEVLDLSFNRIENAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVALSQSMNTNLVLSN 334
Query: 354 LNL------NDNTITYKGAIPLGQ 371
+ + D + Y I G+
Sbjct: 335 IYIWGNKFDEDTCVAYSNLIESGR 358
Score = 41 (19.5 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
L KA++N + ++V N G+ G KL++
Sbjct: 66 LSKALRNHPCIGGVDVRYNLIGDVGAYYAAKLLQ 99
>UNIPROTKB|G4MXL7 [details] [associations]
symbol:MGG_01248 "Ran GTPase-activating protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR027038 GO:GO:0043581
EMBL:CM001232 KO:K14319 PANTHER:PTHR24113 RefSeq:XP_003714155.1
ProteinModelPortal:G4MXL7 EnsemblFungi:MGG_01248T0 GeneID:2679480
KEGG:mgr:MGG_01248 Uniprot:G4MXL7
Length = 421
Score = 206 (77.6 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 71/243 (29%), Positives = 113/243 (46%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXX--XXITGCKLLSKALHDCYE 284
L ++L+DNAFG + +AD L S + LS+ L+D E
Sbjct: 98 LTTVNLNDNAFGINTYKPVADFLSSHVPLQHLYLNNNGLGPEAGMYIADALSE-LYDKKE 156
Query: 285 SSKKEGSPLA--LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT-AL 341
++KEG L+ I GRNRLEN K A F K L+ V+M QNGI GIT L
Sbjct: 157 QARKEGRTDVPDLETVICGRNRLENGSMKAWAKAFSKHDKLKEVKMVQNGIRQEGITHLL 216
Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
++ ++ L+L DNT T GA L + L L + D L + G +++ L
Sbjct: 217 TEGLSNTLAIQVLDLQDNTFTITGATALAKIAPTWTDLRELGVSDSYLGAKGGRLLSRAL 276
Query: 402 TD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVE--EMEKL 456
N LE + + N+++ + +K+ LK+I ++ N+ E+ V ++KL
Sbjct: 277 AKGKNEKLETLRMQYNDMNARTLKSFADTVKDGLPALKKIEINGNKLSEDDVSIAALQKL 336
Query: 457 MKS 459
+++
Sbjct: 337 LEA 339
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
A F K L+ V+M QNGI GIT L++ ++ L+L DNT T GA L +
Sbjct: 188 AKAFSKHDKLKEVKMVQNGIRQEGITHLLTEGLSNTLAIQVLDLQDNTFTITGATALAKI 247
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMK 119
L L + D L + G +++ L N LE + + N+++ + +K
Sbjct: 248 APTWTDLRELGVSDSYLGAKGGRLLSRALAKGKNEKLETLRMQYNDMNARTLKSFADTVK 307
Query: 120 NKTK-LKQINVSENQFGEEGVE--EMEKLMKS 148
+ LK+I ++ N+ E+ V ++KL+++
Sbjct: 308 DGLPALKKIEINGNKLSEDDVSIAALQKLLEA 339
>TAIR|locus:2150285 [details] [associations]
symbol:RANGAP2 "AT5G19320" species:3702 "Arabidopsis
thaliana" [GO:0005098 "Ran GTPase activator activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=RCA;TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] GO:GO:0005783
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0005635 GO:GO:0005819 GO:GO:0005096 GO:GO:0043547
GO:GO:0009651 GO:GO:0031965 GO:GO:0006913 EMBL:AF296837
GO:GO:0009524 InterPro:IPR025265 Pfam:PF13943 HOGENOM:HOG000241563
KO:K14319 ProtClustDB:CLSN2684304 EMBL:AF214560 IPI:IPI00541783
PIR:T52068 RefSeq:NP_197433.1 UniGene:At.11887
ProteinModelPortal:Q9M651 SMR:Q9M651 IntAct:Q9M651 STRING:Q9M651
PaxDb:Q9M651 PRIDE:Q9M651 EnsemblPlants:AT5G19320.1 GeneID:832052
KEGG:ath:AT5G19320 TAIR:At5g19320 eggNOG:NOG313064
InParanoid:Q9M651 OMA:NTIGIEA PhylomeDB:Q9M651
Genevestigator:Q9M651 Uniprot:Q9M651
Length = 545
Score = 176 (67.0 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 283
G+ L L+LSDNA G GV LL+S I+ K ++A+ +
Sbjct: 213 GSILSSLNLSDNALGEKGVRAFGALLKS----LSSLEELYLMNDGIS--KEAAQAVSELI 266
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
S++ L+V N +EGA +A V K+ LE + G ALS+
Sbjct: 267 PSTEN------LRVLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSE 320
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
A E ++ L+L DN + + L + LS + L L L+ GA +I L +
Sbjct: 321 ALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKE 380
Query: 404 NTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
+ + +E + + N+I+V+ + + K L ++N+SEN+ +EG
Sbjct: 381 SASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKDEG 427
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/184 (21%), Positives = 86/184 (46%)
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
S K + + L F+AGR LE + + + L + + N + G+ A
Sbjct: 178 SLKDQLKEVDLSDFVAGRPELEALEVMNIFSDALQGSILSSLNLSDNALGEKGVRAFGAL 237
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
+ +L L L ++ I+ + A + + + +L +L+ + + GA +IA+ + +
Sbjct: 238 LKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRS 297
Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAA 464
LE+ + + +GG+ L +A+++ T ++++++ +N FG E + K + SF
Sbjct: 298 PLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMT 357
Query: 465 ALVL 468
L L
Sbjct: 358 ELYL 361
Score = 140 (54.3 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 35/156 (22%), Positives = 73/156 (46%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N L +G + A+ K L +LE + + +GI A+S+ +NLR L+ ++N
Sbjct: 224 NALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTG 283
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+GA+ + + + + P L + S G ++++ L T +E ++L N + G
Sbjct: 284 DEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAG 343
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+ L K + + + ++ +S +EG + +K
Sbjct: 344 VSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALK 379
Score = 137 (53.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 37/138 (26%), Positives = 66/138 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A V K+ LE+ + G ALS+A E + L+L DN + + L +
Sbjct: 290 IAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKT 349
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN 120
LS + L L L+ GA +I L ++ + +E + + N+I+V+ + +
Sbjct: 350 LSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAA 409
Query: 121 KTKLKQINVSENQFGEEG 138
K L ++N+SEN+ +EG
Sbjct: 410 KQDLNKLNLSENELKDEG 427
Score = 129 (50.5 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 37/158 (23%), Positives = 71/158 (44%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN-LRHLNLNDNTI 361
N E L+ K + + + + G A+ +A +E+ + + L + N I
Sbjct: 336 NMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDI 395
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQ 420
T + A + ++ L LNL + LK G IA + + ++ L+ ++++ N I
Sbjct: 396 TVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEGHSKLQYIDMSTNYIRRA 455
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
G L + K K +N+ N EEG+EE++++ K
Sbjct: 456 GARALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFK 493
Score = 127 (49.8 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 31/146 (21%), Positives = 70/146 (47%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
L + + N + G+ A + L L L ++ I+ + A + + + +L +L
Sbjct: 216 LSSLNLSDNALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVL 275
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
+ + + GA +IA+ + + LE+ + + +GG+ L +A+++ T ++++++ +
Sbjct: 276 HFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRD 335
Query: 132 NQFGEEGVEEMEKLMKSFGMAAALVL 157
N FG E + K + SF L L
Sbjct: 336 NMFGTEAGVSLSKTLSSFKHMTELYL 361
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/148 (23%), Positives = 68/148 (45%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQ 60
L+ K + + + + G A+ +A +E+ + L + N IT + A +
Sbjct: 346 LSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAA 405
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
++ L LNL + LK G IA + + ++ L+ ++++ N I G L +
Sbjct: 406 CVAAKQDLNKLNLSENELKDEGCVQIANCIEEGHSKLQYIDMSTNYIRRAGARALAHVVV 465
Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
K K +N+ N EEG+EE++++ K
Sbjct: 466 KKEAFKLLNIDGNIISEEGIEELKEIFK 493
Score = 119 (46.9 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 31/144 (21%), Positives = 67/144 (46%)
Query: 4 AVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALS 63
A+ K L +LE + + +GI A+S+ + LR L+ ++N +GA+ + + +
Sbjct: 236 ALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVK 295
Query: 64 KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
+ P L + S G ++++ L T +E ++L N + G+ L K + +
Sbjct: 296 RSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKH 355
Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
+ ++ +S +EG + +K
Sbjct: 356 MTELYLSYLNLEDEGAIAIVNALK 379
Score = 112 (44.5 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 36/152 (23%), Positives = 73/152 (48%)
Query: 305 LENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
LE+EGA + K+ + +E +EM N I +A++ ++L LNL++N +
Sbjct: 366 LEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENELKD 425
Query: 364 KGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+G + + + + S L +++ ++ AGA ++A + + +N+ N IS +G
Sbjct: 426 EGCVQIANCIEEGHSKLQYIDMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNIISEEGI 485
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
+L + K +L + GEE ++ E
Sbjct: 486 EELKEIFKKSPELLGALDENDPDGEEDDDDEE 517
Score = 77 (32.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N L++EG +A ++ + L+ ++M N I G AL+ + + + LN++ N I
Sbjct: 421 NELKDEGCVQIANCIEEGHSKLQYIDMSTNYIRRAGARALAHVVVKKEAFKLLNIDGNII 480
Query: 362 TYKGAIPLGQALSKLPSL 379
+ +G L + K P L
Sbjct: 481 SEEGIEELKEIFKKSPEL 498
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKK 319
A K+ N + EG + L +FKK
Sbjct: 469 AFKLLNIDGNIISEEGIEELKEIFKK 494
Score = 37 (18.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMA 152
K +LK++++S+ G +E +E +M F A
Sbjct: 180 KDQLKEVDLSDFVAGRPELEALE-VMNIFSDA 210
>MGI|MGI:3612191 [details] [associations]
symbol:Nlrc5 "NLR family, CARD domain containing 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006952 "defense response" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO;IDA] [GO:0043549 "regulation of kinase
activity" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO;IMP] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=ISO]
[GO:0060339 "negative regulation of type I interferon-mediated
signaling pathway" evidence=ISO;IDA] [GO:0060340 "positive
regulation of type I interferon-mediated signaling pathway"
evidence=ISO] InterPro:IPR000767 PRINTS:PR00364 PROSITE:PS51450
MGI:MGI:3612191 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0045087 GO:GO:0051607 GO:GO:0032088 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0060339 GO:GO:0060340 GO:GO:0060335
eggNOG:NOG265451 CTD:84166 HOVERGEN:HBG108194 OrthoDB:EOG4Z0B4Q
EMBL:FJ889356 EMBL:AK220210 IPI:IPI00462310 IPI:IPI00944192
RefSeq:NP_001028379.2 UniGene:Mm.334720 ProteinModelPortal:C3VPR6
SMR:C3VPR6 IntAct:C3VPR6 STRING:C3VPR6 GeneID:434341
KEGG:mmu:434341 UCSC:uc009mwj.2 UCSC:uc012gio.1
HOGENOM:HOG000168392 InParanoid:Q571H9 NextBio:409534
Genevestigator:C3VPR6 Uniprot:C3VPR6
Length = 1915
Score = 166 (63.5 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 45/151 (29%), Positives = 70/151 (46%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + G + LAA+ KL L + ++ N I VG L+ + LR NL+ N I
Sbjct: 1586 NQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIG 1645
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+ G L L KLP L +L + G +A L L +L+ N I GG
Sbjct: 1646 HVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGG 1705
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
+ LVK++ + L++I + N GE E+
Sbjct: 1706 VQLVKSLTHFEHLEEIKLGNNALGEPTALEL 1736
Score = 152 (58.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 43/141 (30%), Positives = 64/141 (45%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LAA+ KL L ++ N I VG L+ + +LR NL+ N I + G L
Sbjct: 1596 LAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAI 1655
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L KLP L +L + G +A L L +L+ N I GG+ LVK++ +
Sbjct: 1656 LPKLPELRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHF 1715
Query: 122 TKLKQINVSENQFGEEGVEEM 142
L++I + N GE E+
Sbjct: 1716 EHLEEIKLGNNALGEPTALEL 1736
Score = 148 (57.2 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 45/155 (29%), Positives = 70/155 (45%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
L+ F N++ + G + LAA+ KL L + + N I HVG L+ + LR
Sbjct: 1606 LRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKF 1665
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
+L+ N I G L L KLP L +L + AG + K LT LE++ L
Sbjct: 1666 DLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGN 1725
Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
N + L+L A + +L+ + + + G EG
Sbjct: 1726 NALGEPTALEL--AQRLPPQLRVLCLPSSHLGPEG 1758
Score = 128 (50.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 41/137 (29%), Positives = 61/137 (44%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LAA+ KL L + N I HVG L+ + +LR +L+ N I G L
Sbjct: 1624 LAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAI 1683
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L KLP L +L + AG + K LT LE++ L N + L+L A +
Sbjct: 1684 LPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEPTALEL--AQRLP 1741
Query: 122 TKLKQINVSENQFGEEG 138
+L+ + + + G EG
Sbjct: 1742 PQLRVLCLPSSHLGPEG 1758
Score = 118 (46.6 bits), Expect = 3.1e-08, Sum P(4) = 3.1e-08
Identities = 37/129 (28%), Positives = 62/129 (48%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
L+ F RN++ + G + LAA+ KL L + ++ N I G L + ++L +
Sbjct: 1662 LRKFDLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEI 1721
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
L +N + A+ L Q L P L +L L L GA +A+ L +E+V+L
Sbjct: 1722 KLGNNALGEPTALELAQRLP--PQLRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLAE 1779
Query: 415 NEISVQGGL 423
N ++ GG+
Sbjct: 1780 NNLA--GGV 1786
Score = 110 (43.8 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 40/155 (25%), Positives = 65/155 (41%)
Query: 309 GAKMLAAVFKKLKTLERVE---MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 365
GA LA + + L + ++ + N I VG L+ + LR +L+ N I G
Sbjct: 1561 GASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVG 1620
Query: 366 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 425
L L KLP L NL + G +A L L +L+ N+I G L
Sbjct: 1621 TQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCL 1680
Query: 426 VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
+ +L++ ++S N+ G G ++ K + F
Sbjct: 1681 AAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHF 1715
Score = 108 (43.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 37/149 (24%), Positives = 63/149 (42%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+L ++ L+ + + N I VG L+ + +LR +L+ N I G L
Sbjct: 1567 LLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAA 1626
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L KLP L NL + G +A L L +L+ N+I G L +
Sbjct: 1627 ILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSRNQIGDVGTQCLAAILPK 1686
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSF 149
+L++ ++S N+ G G ++ K + F
Sbjct: 1687 LPELRKFDLSGNRIGPAGGVQLVKSLTHF 1715
Score = 100 (40.3 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 37/152 (24%), Positives = 71/152 (46%)
Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVE-MPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
G N L A LA ++L RV +P + + G L+ A E+ ++ ++L +N
Sbjct: 1724 GNNALGEPTALELA---QRLPPQLRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLAEN 1780
Query: 360 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
+ G +P + +LP L ++L C ++ A +A LT LE + L+ N +
Sbjct: 1781 NLA--GGVP--RFSKRLPLLRQIDLEFCKIEDQAARHLAANLTLFPALEKLLLSGNLLGD 1836
Query: 420 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
+ +L + + +LK++N+ N+ G +
Sbjct: 1837 EVAAELAQVLPQMGQLKKVNLEWNRITARGAQ 1868
Score = 99 (39.9 bits), Expect = 3.3e-06, Sum P(4) = 3.3e-06
Identities = 43/175 (24%), Positives = 75/175 (42%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
L+ F NR+ G L + LE +++ N + TAL A LR L
Sbjct: 1690 LRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALGEP--TALELAQRLPPQLRVL 1747
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
L + + +GA+ L QAL + P + ++L + L + G +K L L ++L
Sbjct: 1748 CLPSSHLGPEGALGLAQALEQCPHIEEVSLAENNL-AGGVPRFSKRLP---LLRQIDLEF 1803
Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
+I Q L + L+++ +S N G+E E+ +++ G + LE
Sbjct: 1804 CKIEDQAARHLAANLTLFPALEKLLLSGNLLGDEVAAELAQVLPQMGQLKKVNLE 1858
Score = 98 (39.6 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 35/149 (23%), Positives = 59/149 (39%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N L E ++L + L+++ + + + L L+ L L+ N I
Sbjct: 1530 NSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIG 1589
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
G L L KLP L +L + G +A L L NL+ N+I G
Sbjct: 1590 DVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGT 1649
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVE 451
L + +L++ ++S NQ G+ G +
Sbjct: 1650 QCLAAILPKLPELRKFDLSRNQIGDVGTQ 1678
Score = 93 (37.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 42/157 (26%), Positives = 67/157 (42%)
Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
KL + AL + + P L+V + L EGA LA ++ +E V + +N
Sbjct: 1722 KLGNNALGEPTALELAQRLPPQLRVLCLPSSHLGPEGALGLAQALEQCPHIEEVSLAENN 1781
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
+ G+ S LR ++L I + A L L+ P+L L L LL
Sbjct: 1782 LAG-GVPRFSKRLPL---LRQIDLEFCKIEDQAARHLAANLTLFPALEKLLLSGNLLGDE 1837
Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
A+ +A+ L L+ VNL N I+ +G L + +
Sbjct: 1838 VAAELAQVLPQMGQLKKVNLEWNRITARGAQLLAQGL 1874
Score = 89 (36.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/129 (24%), Positives = 53/129 (41%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
LE ++ N + L A + +L+ L+L+ + L Q LS++ L L
Sbjct: 1522 LEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQGLSRMTLLQDL 1581
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
L + G +A L L +L+ N+I G L + +L++ N+S
Sbjct: 1582 CLSHNQIGDVGTQCLAAILPKLPELRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSH 1641
Query: 132 NQFGEEGVE 140
NQ G G +
Sbjct: 1642 NQIGHVGTQ 1650
Score = 88 (36.0 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 37/161 (22%), Positives = 62/161 (38%)
Query: 291 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 350
S LK F +++ + LA LE ++ N + L A +
Sbjct: 1490 SSCELKSFRLTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLMGALQGTCR 1549
Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
L+ L+L+ + L Q LS++ L L L + G +A L L
Sbjct: 1550 LKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQCLAAILPKLPELRKF 1609
Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
+L+ N+I G L + +L++ N+S NQ G G +
Sbjct: 1610 DLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQ 1650
Score = 84 (34.6 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 32/148 (21%), Positives = 69/148 (46%)
Query: 306 ENEG--AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
+N+G +K+L + L+ + + + +T L+ +L L+ ++N++
Sbjct: 1475 DNDGTSSKLLQNILLSSCELKSFRLTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLRE 1534
Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
+ L AL L L+L L ++ + + + L+ T L+D+ L+ N+I G
Sbjct: 1535 EDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHNQIGDVGTQ 1594
Query: 424 DLVKAMKNKTKLKQINVSENQFGEEGVE 451
L + +L++ ++S NQ G+ G +
Sbjct: 1595 CLAAILPKLPELRKFDLSHNQIGDVGTQ 1622
Score = 83 (34.3 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 29 ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
AL + F+++ +L +NL+ N + G + +A S+L L+L D L G + + K
Sbjct: 863 ALVELFQKSPQLEEVNLSGNHLEDDGCRLVAEAASQLHIAQKLDLSDNGLSQTGVTYVLK 922
Query: 89 YLTDNTTLEDVNLT 102
++ TLED++++
Sbjct: 923 AMSTCGTLEDLHIS 936
Score = 78 (32.5 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
L+H+++ N + G+ L++ L+ LNL+ N ++ L Q LS L + L
Sbjct: 1009 LDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNLSRNGLSMDAVFSLVQCLSSLQWVFHL 1068
Query: 72 NLG---DCL-LKSAGASSIA---KYLTDNTTLE 97
++ DC+ L+ AG S A K+ T LE
Sbjct: 1069 DVSLESDCIFLRGAGTSRDALEPKFQTGVQVLE 1101
Score = 77 (32.2 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INV 129
L L C L+ A ++ + + LE+VNL+ N + G LV ++ + Q +++
Sbjct: 849 LRLQKCQLRIRDAEALVELFQKSPQLEEVNLSGNHLE-DDGCRLVAEAASQLHIAQKLDL 907
Query: 130 SENQFGEEGVEEMEKLMKSFG 150
S+N + GV + K M + G
Sbjct: 908 SDNGLSQTGVTYVLKAMSTCG 928
Score = 76 (31.8 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
L ++L + SL L L + + G S + + L + LE+V+L N++ L LV+
Sbjct: 709 LCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVEL 768
Query: 118 MKNKTKLKQINVSENQF 134
+ + KL+++++S N F
Sbjct: 769 LPSLPKLQKLDLSRNSF 785
Score = 69 (29.3 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 363
++E++ A+ LAA LE++ + N + L+ + L+ +NL N IT
Sbjct: 1805 KIEDQAARHLAANLTLFPALEKLLLSGNLLGDEVAAELAQVLPQMGQLKKVNLEWNRITA 1864
Query: 364 KGAIPLGQALSKLPSLAILNL 384
+GA L Q L + + ++ L
Sbjct: 1865 RGAQLLAQGLVQGSCVPVIRL 1885
Score = 68 (29.0 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
ALSK +L+ L+L D LL G + + L ++L+ N IS +G L L++ + +
Sbjct: 1236 ALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSHNNISQEGILYLLETLPS 1295
Query: 121 KTKLKQINVS 130
+++++VS
Sbjct: 1296 YPNIQEVSVS 1305
Score = 67 (28.6 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 26/92 (28%), Positives = 41/92 (44%)
Query: 40 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
L+ L L + IT +G L Q L L ++L D LK S+ + L L+ +
Sbjct: 719 LKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVELLPSLPKLQKL 778
Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
+L+ N S L LVK ++++ V E
Sbjct: 779 DLSRNSFSRSILLSLVKVAITCPTVRKLQVRE 810
Score = 67 (28.6 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 26/125 (20%), Positives = 59/125 (47%)
Query: 24 HVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA 83
H + AL++ E HL+ + + + P +AL + L+ A A
Sbjct: 651 HADLAALANILEHRDDPIHLDFDGCPL--EPHCP--EALVGCGQVENLSFKSRKCGDAFA 706
Query: 84 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
++ + L +L+ + LT + I+ QG L++ + ++L+++++ +NQ + V +
Sbjct: 707 EALCRSLPTMGSLKTLGLTGSRITAQGISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLV 766
Query: 144 KLMKS 148
+L+ S
Sbjct: 767 ELLPS 771
Score = 64 (27.6 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
+ L HL+L+DN++ KG I L + L L L LNL L S+ + L+
Sbjct: 1005 QTHNLDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNLSRNGLSMDAVFSLVQCLSSLQW 1064
Query: 96 LE--DVNLTCNEISVQG 110
+ DV+L + I ++G
Sbjct: 1065 VFHLDVSLESDCIFLRG 1081
Score = 64 (27.6 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 23/100 (23%), Positives = 46/100 (46%)
Query: 32 DAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 90
D+ +E + + L L + + A L + K P L +NL L+ G +A+
Sbjct: 837 DSLKEGQSRSLQLRLQKCQLRIRDAEALVELFQKSPQLEEVNLSGNHLEDDGCRLVAEAA 896
Query: 91 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
+ + ++L+ N +S G ++KAM L+ +++S
Sbjct: 897 SQLHIAQKLDLSDNGLSQTGVTYVLKAMSTCGTLEDLHIS 936
Score = 62 (26.9 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L +F+K LE V + N + G +++A + + L+L+DN ++ G + +A
Sbjct: 864 LVELFQKSPQLEEVNLSGNHLEDDGCRLVAEAASQLHIAQKLDLSDNGLSQTGVTYVLKA 923
Query: 62 LSKLPSLAILNL 73
+S +L L++
Sbjct: 924 MSTCGTLEDLHI 935
Score = 56 (24.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L K L +++ N + +G+ L + + L+L+ N I+ +G + L +
Sbjct: 1233 LCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSHNNISQEGILYLLET 1292
Query: 62 LSKLPSL 68
L P++
Sbjct: 1293 LPSYPNI 1299
Score = 55 (24.4 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 24/139 (17%), Positives = 53/139 (38%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L + +L+ L ++ N L + + +L+ L + ++ K L
Sbjct: 1456 LVETYARLQQLSLSQVSFNDNDGTSSKLLQNILLSSCELKSFRLTFSQVSTKSLTHLAFG 1515
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L L L+ + L+ + L L+ ++L+ + L++ +
Sbjct: 1516 LGHCHHLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLGASSLALLIQGLSRM 1575
Query: 122 TKLKQINVSENQFGEEGVE 140
T L+ + +S NQ G+ G +
Sbjct: 1576 TLLQDLCLSHNQIGDVGTQ 1594
Score = 51 (23.0 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 227 LVELDLSDNAFGPIGVEGLADLL 249
L +LDL+DN G IG+ L + L
Sbjct: 1243 LSQLDLTDNLLGDIGLRCLLECL 1265
Score = 51 (23.0 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 26 GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
GI+ L +L ++L+DN + + L + L LP L L+L +++ + S
Sbjct: 733 GISHLIQTLPLCSQLEEVSLHDNQLKDPEVLSLVELLPSLPKLQKLDLS----RNSFSRS 788
Query: 86 IAKYLTDNTTLEDVNLTCNEI-SVQ-GGLDLVKAMK--NKTKLKQINVSENQFGEEGVEE 141
I +L V +TC + +Q LDL+ + +T +Q S+ Q G++ ++E
Sbjct: 789 IL------LSLVKVAITCPTVRKLQVRELDLIFYLSPVTETATQQSGASDVQ-GKDSLKE 841
Score = 51 (23.0 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 32/163 (19%), Positives = 68/163 (41%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLR--HLNLNDNTITYKGAI-P 57
++A +L + +++ NG+ G+T + A L H++L +NT+ A P
Sbjct: 891 LVAEAASQLHIAQKLDLSDNGLSQTGVTYVLKAMSTCGTLEDLHISLLNNTVVLTFAQEP 950
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT-CNEIS--VQGGLDL 114
Q S +++ S + L+ + + LT C ++ + +
Sbjct: 951 REQEGSCKGRAPLISF---------VSPVTSELSQRS--RRIRLTHCGFLAKHTETLCEA 999
Query: 115 VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
++A L +++S+N G +GV + +L+ G +L L
Sbjct: 1000 LRASCQTHNLDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNL 1042
Score = 50 (22.7 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 227 LVELDLSDNAFGPIGVEGLADLL 249
L LDLSDN+ G GV L +LL
Sbjct: 1009 LDHLDLSDNSLGGKGVILLTELL 1031
Score = 49 (22.3 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
L+ ++L+ N + +G + L + + LK +N+S N + V + + + S
Sbjct: 1009 LDHLDLSDNSLGGKGVILLTELLPGLGPLKSLNLSRNGLSMDAVFSLVQCLSS 1061
Score = 48 (22.0 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
L+L D L G + + L L+ +NL+ N +S+ LV+ + + + ++VS
Sbjct: 1012 LDLSDNSLGGKGVILLTELLPGLGPLKSLNLSRNGLSMDAVFSLVQCLSSLQWVFHLDVS 1071
Score = 48 (22.0 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
L L L+ N + + A L Q L ++ L +NL + + GA +A+ L + + +
Sbjct: 1824 LEKLLLSGNLLGDEVAAELAQVLPQMGQLKKVNLEWNRITARGAQLLAQGLVQGSCVPVI 1883
Query: 411 NLTCNEI 417
L N I
Sbjct: 1884 RLWNNPI 1890
Score = 47 (21.6 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 29/161 (18%), Positives = 67/161 (41%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
LE V + N + + +L + KL+ L+L+ N+ + + L + P++ L
Sbjct: 747 LEEVSLHDNQLKDPEVLSLVELLPSLPKLQKLDLSRNSFSRSILLSLVKVAITCPTVRKL 806
Query: 72 NLGDCLL------------KSAGASSIA--KYLTDNTTLE-DVNLTCNEISVQGGLDLVK 116
+ + L + +GAS + L + + + L ++ ++ LV+
Sbjct: 807 QVRELDLIFYLSPVTETATQQSGASDVQGKDSLKEGQSRSLQLRLQKCQLRIRDAEALVE 866
Query: 117 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
+ +L+++N+S N ++G + + +A L L
Sbjct: 867 LFQKSPQLEEVNLSGNHLEDDGCRLVAEAASQLHIAQKLDL 907
Score = 44 (20.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 33 AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 92
A + L L+L DN + G L + L +LP L+L + G + + L
Sbjct: 1236 ALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSHNNISQEGILYLLETLPS 1295
Query: 93 NTTLEDVNLT 102
+++V+++
Sbjct: 1296 YPNIQEVSVS 1305
Score = 41 (19.5 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 14/74 (18%), Positives = 32/74 (43%)
Query: 76 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
C L ++ L+ L ++LT N + G L++ + +++S N
Sbjct: 1223 CSLSQEHMETLCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSHNNIS 1282
Query: 136 EEGVEEMEKLMKSF 149
+EG+ + + + S+
Sbjct: 1283 QEGILYLLETLPSY 1296
Score = 41 (19.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 27 ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 80
+T L E++ + L+ +++ L Q L +LP L++L L +L S
Sbjct: 1123 LTFLCATLEKSPGPLEVQLSCKSLSDDSLKILLQCLPQLPQLSLLQLRHTVLSS 1176
Score = 40 (19.1 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 229 ELDLSDNAFGPIGVEGLADLLRSSC 253
+LDLSDN GV + + S+C
Sbjct: 904 KLDLSDNGLSQTGVTYVLKAM-STC 927
>UNIPROTKB|Q86W24 [details] [associations]
symbol:NLRP14 "NACHT, LRR and PYD domains-containing
protein 14" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] GO:GO:0007275
GO:GO:0005524 GO:GO:0030154 GO:GO:0007283 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837 eggNOG:NOG82860
HOGENOM:HOG000294064 HOVERGEN:HBG063656 EMBL:AY154469 EMBL:BK001107
IPI:IPI00219561 RefSeq:NP_789792.1 UniGene:Hs.449637
ProteinModelPortal:Q86W24 SMR:Q86W24 STRING:Q86W24
PhosphoSite:Q86W24 DMDM:38372322 PaxDb:Q86W24 PRIDE:Q86W24
DNASU:338323 Ensembl:ENST00000299481 GeneID:338323 KEGG:hsa:338323
UCSC:uc001mfb.1 CTD:338323 GeneCards:GC11P007017 HGNC:HGNC:22939
HPA:HPA039477 MIM:609665 neXtProt:NX_Q86W24 PharmGKB:PA162397917
InParanoid:Q86W24 OMA:TFPDGCQ OrthoDB:EOG4HDSSR PhylomeDB:Q86W24
GenomeRNAi:338323 NextBio:96933 Bgee:Q86W24 CleanEx:HS_NLRP14
Genevestigator:Q86W24 GermOnline:ENSG00000158077 Uniprot:Q86W24
Length = 1093
Score = 168 (64.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 70/256 (27%), Positives = 118/256 (46%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + RL L L+DN G GV+ ++D L+ + C ++ L + LH
Sbjct: 839 LISNKRLTHLCLADNVLGDGGVKLMSDALQHAQCTLKSLVLRRCHFTSLSSEYLSTSLLH 898
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
+ K + L L G N L++ G K+L VF+ L+ +E+ + +
Sbjct: 899 N------KSLTHLDL-----GSNWLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCL 947
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSI 397
L+ N NLR L+L +N + G L AL + P+ I LG C L S +
Sbjct: 948 DLASVILNNPNLRSLDLGNNDLQDDGVKILCDAL-RYPNCNIQRLGLEYCGLTSLCCQDL 1006
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEMEKL 456
+ L N L +NLT N + +G + L K +K+ K KL+ + + + F EE +KL
Sbjct: 1007 SSALICNKRLIKMNLTQNTLGYEGIVKLYKVLKSPKCKLQVLGLCKEAFDEEA----QKL 1062
Query: 457 MKSFGMAAA-LVLEDD 471
+++ G++ L+++ D
Sbjct: 1063 LEAVGVSNPHLIIKPD 1078
Score = 90 (36.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
K L H+++ + I G+ +L +A + + KL+ L L +T + + AL + SL
Sbjct: 729 KNLMHLDLKGSDIGDNGVKSLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRSQSL 788
Query: 69 AILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
LNL L G + + L LE ++L ++ G L A+ + +L +
Sbjct: 789 IFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHL 848
Query: 128 NVSENQFGEEGVEEMEKLMK 147
+++N G+ GV+ M ++
Sbjct: 849 CLADNVLGDGGVKLMSDALQ 868
Score = 82 (33.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 26 GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGA 83
G +S + NK L HL+L + I G L +AL K P L L L C L
Sbjct: 717 GCQDISTSLIHNKNLMHLDLKGSDIGDNGVKSLCEAL-KHPECKLQTLRLESCNLTVFCC 775
Query: 84 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVE 140
+I+ L + +L +NL+ N + G L +A+++ K L+++++ E G E
Sbjct: 776 LNISNALIRSQSLIFLNLSTNNLLDDGVQLLCEALRHPKCYLERLSLESCGLTEAGCE 833
>RGD|621398 [details] [associations]
symbol:Rnh1 "ribonuclease/angiogenin inhibitor 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008428 "ribonuclease inhibitor activity" evidence=ISO]
[GO:0032311 "angiogenin-PRI complex" evidence=ISO] [GO:0045765
"regulation of angiogenesis" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:621398 GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 InterPro:IPR003590 SMART:SM00368
HOGENOM:HOG000140402 HOVERGEN:HBG001059 KO:K16634 OrthoDB:EOG4DZ1VG
EMBL:X62528 EMBL:BC070501 IPI:IPI00959348 PIR:S20597
RefSeq:NP_001257691.1 RefSeq:NP_001257692.1 RefSeq:NP_620805.2
UniGene:Rn.3756 ProteinModelPortal:P29315 SMR:P29315 IntAct:P29315
STRING:P29315 PhosphoSite:P29315 PRIDE:P29315 GeneID:100360501
KEGG:rno:100360501 eggNOG:NOG299368 InParanoid:P29315
NextBio:623232 ArrayExpress:P29315 Genevestigator:P29315
GermOnline:ENSRNOG00000016416 Uniprot:P29315
Length = 456
Score = 160 (61.4 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 64/237 (27%), Positives = 110/237 (46%)
Query: 225 ARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 283
A L ELDL N G G+ L LL SC GCK L + L
Sbjct: 222 ASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAE--GCKDLCRVLRA-- 277
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALS 342
+ S KE S +AG N L++EGA++L ++ + LE + + +
Sbjct: 278 KQSLKELS-------LAG-NELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFC 329
Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 401
+N++L L ++ N + G + L +AL + L +L LGDC + +G SS+A L
Sbjct: 330 SVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVL 389
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
N +L +++L+ N + G L L++++K + + Q V + + + VE+ + ++
Sbjct: 390 LANRSLRELDLSNNCMGDNGVLQLLESLKQPSCILQQLVLYDIYWTDEVEDQLRALE 446
Score = 109 (43.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 52/212 (24%), Positives = 84/212 (39%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L++ + L EL L+DN G G++ L + LR C T C+ L+ L
Sbjct: 104 LRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQC-RLEKLQLEYCNLTATSCEPLASVLR 162
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
K + K + N G L K LE +++ GI
Sbjct: 163 -----VKPD-----FKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCK 212
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSI 397
L D +L+ L+L N + G L L LPS L L L DC + + G +
Sbjct: 213 DLCDVVASKASLQELDLGSNKLGNTGIAALCSGLL-LPSCRLRTLWLWDCDVTAEGCKDL 271
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+ L +L++++L NE+ +G L +++
Sbjct: 272 CRVLRAKQSLKELSLAGNELKDEGAQLLCESL 303
Score = 86 (35.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 29/106 (27%), Positives = 49/106 (46%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
K++ L+L + ++T G L L L +L L+L D L G + + L D LE
Sbjct: 81 KIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLE 140
Query: 98 DVNLT-CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
+ L CN ++ L ++ K K++ +S N F E G+ +
Sbjct: 141 KLQLEYCN-LTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTL 185
Score = 76 (31.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 28/118 (23%), Positives = 55/118 (46%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LN 72
V + G+ V + A + N L L+L N + G + Q L P+ I L+
Sbjct: 28 VRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGLQN-PTCKIQKLS 86
Query: 73 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINV 129
L +C L AG + L +TL +++L N + +G L + +++ + +L+++ +
Sbjct: 87 LQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQL 144
Score = 71 (30.1 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 22/100 (22%), Positives = 46/100 (46%)
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG-GLDLVKAM 118
+ L + ++ L DC L I + N L +++L NE+ G GL +++ +
Sbjct: 17 ELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGL-VLQGL 75
Query: 119 KNKT-KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
+N T K++++++ E G + +++S L L
Sbjct: 76 QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHL 115
Score = 68 (29.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 30/118 (25%), Positives = 50/118 (42%)
Query: 19 QN-GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGD 75
QN + G L D LR L+LNDN + +G L + L P + L L
Sbjct: 88 QNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRD-PQCRLEKLQLEY 146
Query: 76 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSEN 132
C L + +A L +++ L+ N+ G L + +K+ +L+ + + EN
Sbjct: 147 CNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKL-EN 203
Score = 66 (28.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 22/100 (22%), Positives = 52/100 (52%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNL 101
+ L+D +T + A+ P+L L+L L AG + + L + T ++ ++L
Sbjct: 28 VRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGLQNPTCKIQKLSL 87
Query: 102 -TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
C+ G+ L +++ + L+++++++N G+EG++
Sbjct: 88 QNCSLTEAGCGV-LPDVLRSLSTLRELHLNDNPLGDEGLK 126
>RGD|2321956 [details] [associations]
symbol:LOC100360501 "ribonuclease inhibitor-like" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=IEA]
[GO:0032311 "angiogenin-PRI complex" evidence=IEA] [GO:0045765
"regulation of angiogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2321956 GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 EMBL:AC118351 EMBL:CH473953
InterPro:IPR003590 SMART:SM00368 KO:K16634 OMA:MEDRLQA
GeneTree:ENSGT00670000097902 RefSeq:NP_001257692.1
RefSeq:NP_620805.2 UniGene:Rn.3756 GeneID:100360501
KEGG:rno:100360501 EMBL:AB296102 IPI:IPI00959820
Ensembl:ENSRNOT00000022241 Uniprot:E2RUH2
Length = 456
Score = 159 (61.0 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 64/236 (27%), Positives = 111/236 (47%)
Query: 225 ARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 283
A L ELDL N G G+ L LL SC GCK L + L
Sbjct: 222 ASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAE--GCKDLCRVLRA-- 277
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALS 342
+ S KE S +AG N L++EGA++L ++ + LE + + +
Sbjct: 278 KQSLKELS-------LAG-NELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFC 329
Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 401
+N++L L ++ N + G + L +AL + L +L LGDC + +G SS+A L
Sbjct: 330 SVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVL 389
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKL 456
N +L +++L+ N + G L L++++K + L+Q+ + + + +E +++ L
Sbjct: 390 LANRSLRELDLSNNCMGDTGVLQLLESLKQPSCALQQLVLYDIYWTDEVEDQLRAL 445
Score = 109 (43.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 52/212 (24%), Positives = 84/212 (39%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L++ + L EL L+DN G G++ L + LR C T C+ L+ L
Sbjct: 104 LRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQC-RLEKLQLEYCNLTATSCEPLASVLR 162
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
K + K + N G L K LE +++ GI
Sbjct: 163 -----VKPD-----FKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCK 212
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSI 397
L D +L+ L+L N + G L L LPS L L L DC + + G +
Sbjct: 213 DLCDVVASKASLQELDLGSNKLGNTGIAALCSGLL-LPSCRLRTLWLWDCDVTAEGCKDL 271
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+ L +L++++L NE+ +G L +++
Sbjct: 272 CRVLRAKQSLKELSLAGNELKDEGAQLLCESL 303
Score = 86 (35.3 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 29/106 (27%), Positives = 49/106 (46%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
K++ L+L + ++T G L L L +L L+L D L G + + L D LE
Sbjct: 81 KIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLE 140
Query: 98 DVNLT-CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
+ L CN ++ L ++ K K++ +S N F E G+ +
Sbjct: 141 KLQLEYCN-LTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTL 185
Score = 76 (31.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 28/118 (23%), Positives = 55/118 (46%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LN 72
V + G+ V + A + N L L+L N + G + Q L P+ I L+
Sbjct: 28 VRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGLQN-PTCKIQKLS 86
Query: 73 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINV 129
L +C L AG + L +TL +++L N + +G L + +++ + +L+++ +
Sbjct: 87 LQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQL 144
Score = 71 (30.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 22/100 (22%), Positives = 46/100 (46%)
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG-GLDLVKAM 118
+ L + ++ L DC L I + N L +++L NE+ G GL +++ +
Sbjct: 17 ELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGL-VLQGL 75
Query: 119 KNKT-KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
+N T K++++++ E G + +++S L L
Sbjct: 76 QNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHL 115
Score = 68 (29.0 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 30/118 (25%), Positives = 50/118 (42%)
Query: 19 QN-GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGD 75
QN + G L D LR L+LNDN + +G L + L P + L L
Sbjct: 88 QNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRD-PQCRLEKLQLEY 146
Query: 76 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSEN 132
C L + +A L +++ L+ N+ G L + +K+ +L+ + + EN
Sbjct: 147 CNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKL-EN 203
Score = 66 (28.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 22/100 (22%), Positives = 52/100 (52%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNL 101
+ L+D +T + A+ P+L L+L L AG + + L + T ++ ++L
Sbjct: 28 VRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGLQNPTCKIQKLSL 87
Query: 102 -TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
C+ G+ L +++ + L+++++++N G+EG++
Sbjct: 88 QNCSLTEAGCGV-LPDVLRSLSTLRELHLNDNPLGDEGLK 126
>UNIPROTKB|P13489 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0006402 "mRNA catabolic process" evidence=NAS]
[GO:0008428 "ribonuclease inhibitor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045765 "regulation
of angiogenesis" evidence=IDA] [GO:0032311 "angiogenin-PRI complex"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
GO:GO:0045765 GO:GO:0008428 GO:GO:0006402 GO:GO:0032311 PDB:1A4Y
PDBsum:1A4Y InterPro:IPR003590 SMART:SM00368 EMBL:M22414
EMBL:M36717 EMBL:X13973 EMBL:AY071904 EMBL:AL161967 EMBL:BC000677
EMBL:BC003506 EMBL:BC011186 EMBL:BC011500 EMBL:BC014629
EMBL:BC024037 EMBL:BC047730 IPI:IPI00550069 PIR:A31858
RefSeq:NP_002930.2 RefSeq:NP_976317.1 RefSeq:NP_976318.1
RefSeq:NP_976319.1 RefSeq:NP_976320.1 RefSeq:NP_976321.1
RefSeq:NP_976322.1 RefSeq:NP_976323.1 UniGene:Hs.530687 PDB:1Z7X
PDB:2BEX PDB:2Q4G PDBsum:1Z7X PDBsum:2BEX PDBsum:2Q4G
ProteinModelPortal:P13489 SMR:P13489 IntAct:P13489 STRING:P13489
PhosphoSite:P13489 DMDM:132573 REPRODUCTION-2DPAGE:IPI00550069
PaxDb:P13489 PeptideAtlas:P13489 PRIDE:P13489
Ensembl:ENST00000354420 Ensembl:ENST00000356187
Ensembl:ENST00000397604 Ensembl:ENST00000397614
Ensembl:ENST00000397615 Ensembl:ENST00000438658
Ensembl:ENST00000533410 Ensembl:ENST00000534797 GeneID:6050
KEGG:hsa:6050 UCSC:uc001lpk.1 CTD:6050 GeneCards:GC11M000485
HGNC:HGNC:10074 HPA:HPA039223 HPA:HPA040781 MIM:173320
neXtProt:NX_P13489 PharmGKB:PA34447 eggNOG:NOG308334
HOGENOM:HOG000140402 HOVERGEN:HBG001059 InParanoid:P13489 KO:K16634
OMA:MEDRLQA OrthoDB:EOG4DZ1VG PhylomeDB:P13489 ChiTaRS:RNH1
EvolutionaryTrace:P13489 GenomeRNAi:6050 NextBio:23577
ArrayExpress:P13489 Bgee:P13489 CleanEx:HS_RNH1
Genevestigator:P13489 GermOnline:ENSG00000023191 Uniprot:P13489
Length = 461
Score = 132 (51.5 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 61/238 (25%), Positives = 104/238 (43%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHD-CY 283
A L EL L N G +G +A+L C I C + +K D C
Sbjct: 227 ASLRELALGSNKLGDVG---MAEL-----CPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALS 342
KE +LK N L +EGA++L + + LE + + + S
Sbjct: 279 VLRAKE----SLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334
Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 401
+N+ L L +++N + G L Q L + S L +L L DC + + SS+A L
Sbjct: 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMK 458
N +L +++L+ N + G L LV++++ L+Q+ + + + EE + ++ L K
Sbjct: 395 LANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEK 452
Score = 114 (45.2 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
L + + N + VG+ + + K++ L+L + +T G L L LP+L
Sbjct: 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 117
Query: 71 LNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+L D LL AG + + L D LE + L +S L ++ K K++ V
Sbjct: 118 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV 177
Query: 130 SENQFGEEGV 139
S N E GV
Sbjct: 178 SNNDINEAGV 187
Score = 99 (39.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 30/144 (20%), Positives = 65/144 (45%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLG 59
+L++ + L TL+ + + N + G+ L + + + +L L L +++ PL
Sbjct: 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAM 118
L P L + + + AG + + L D+ LE + L ++ DL +
Sbjct: 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIV 223
Query: 119 KNKTKLKQINVSENQFGEEGVEEM 142
+K L+++ + N+ G+ G+ E+
Sbjct: 224 ASKASLRELALGSNKLGDVGMAEL 247
Score = 90 (36.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/203 (22%), Positives = 76/203 (37%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L+T L EL LSDN G G++ L + L C C+ L+ L
Sbjct: 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC-RLEKLQLEYCSLSAASCEPLASVLR 167
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
+K + K N + G ++L K LE +++ G+
Sbjct: 168 -----AKPD-----FKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR 217
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIA 398
L +LR L L N + G L L S L L + +C + + G +
Sbjct: 218 DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277
Query: 399 KYLTDNTTLEDVNLTCNEISVQG 421
+ L +L++++L NE+ +G
Sbjct: 278 RVLRAKESLKELSLAGNELGDEG 300
Score = 87 (35.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
A + L+ + V + G+ +S A N L LNL N + G + Q L
Sbjct: 21 AELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL 80
Query: 63 SKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
+ PS I L+L +C L AG ++ L TL++++L+ N + GL L+
Sbjct: 81 -QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG-DAGLQLL 133
Score = 66 (28.3 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 24/100 (24%), Positives = 48/100 (48%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNL 101
+ L+D +T + AL P+LA LNL L G + + L T + ++ ++L
Sbjct: 33 VRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSL 92
Query: 102 -TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
C G+ L ++ L+++++S+N G+ G++
Sbjct: 93 QNCCLTGAGCGV-LSSTLRTLPTLQELHLSDNLLGDAGLQ 131
Score = 63 (27.2 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 17/71 (23%), Positives = 36/71 (50%)
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
+ L L ++ L DC L A I+ L N L ++NL NE+ G +++ ++
Sbjct: 22 ELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81
Query: 120 NKT-KLKQINV 129
+ K++++++
Sbjct: 82 TPSCKIQKLSL 92
Score = 62 (26.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 26 GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGA 83
G LS L+ L+L+DN + G L + L P + L L C L +A
Sbjct: 101 GCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLD-PQCRLEKLQLEYCSLSAASC 159
Query: 84 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+A L +++ ++ N+I+ G L + +K+
Sbjct: 160 EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKD 196
>UNIPROTKB|Q5ZIY8 [details] [associations]
symbol:RNH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008428
"ribonuclease inhibitor activity" evidence=IEA] [GO:0032311
"angiogenin-PRI complex" evidence=IEA] [GO:0045765 "regulation of
angiogenesis" evidence=IEA] GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 InterPro:IPR003590 SMART:SM00368
CTD:6050 eggNOG:NOG308334 HOGENOM:HOG000140402 HOVERGEN:HBG001059
KO:K16634 OrthoDB:EOG4DZ1VG GeneTree:ENSGT00670000097902
EMBL:AADN02030266 EMBL:AJ720646 IPI:IPI00573868
RefSeq:NP_001006473.1 UniGene:Gga.1426 STRING:Q5ZIY8
Ensembl:ENSGALT00000011181 GeneID:423111 KEGG:gga:423111
InParanoid:Q5ZIY8 OMA:AMAFANI NextBio:20825627 Uniprot:Q5ZIY8
Length = 456
Score = 136 (52.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 60/241 (24%), Positives = 111/241 (46%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
L + L++L + DN G G+ L LL +C CK LS+
Sbjct: 218 LSSKPSLLDLAVGDNKIGDTGLALLCQGLLHPNCKIQKLWLWDCDLTSA--SCKDLSRVF 275
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGI 338
S KE L+V + N L + G +ML K K L+ + + + G+
Sbjct: 276 ------STKE---TLLEVSLIDNN-LRDSGMEMLCQALKDPKAHLQELWVRECGLTAACC 325
Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASS 396
A+S NK+L+ L++ +N + G L + L P+ I L LG+C + +A ++
Sbjct: 326 KAVSSVLSVNKHLQVLHIGENKLGNAGVEILCEGLLH-PNCNIHSLWLGNCDITAACCAT 384
Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEK 455
+A + L +++L+ N + +G + L +A++N K++Q+ + + +G E +E++
Sbjct: 385 LANVMVTKQNLTELDLSYNTLEDEGVMKLCEAVRNPNCKMQQLILYDIFWGPEVDDELKA 444
Query: 456 L 456
L
Sbjct: 445 L 445
Score = 105 (42.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 36/143 (25%), Positives = 69/143 (48%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQ 60
L+++ +L+ +++ N + GI L + L+ L L + +T L
Sbjct: 43 LSSIIHTNPSLKELKLNNNELGDAGIEYLCKGLLTPSCSLQKLWLQNCNLTSASCETLRS 102
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
LS PSL L++GD L +AG + + L + N L+ + L E++ L A++
Sbjct: 103 VLSAQPSLTELHVGDNKLGTAGVKVLCQGLMNPNCKLQKLQLEYCELTADIVEALNAALQ 162
Query: 120 NKTKLKQINVSENQFGEEGVEEM 142
K LK++++S N G+ V+++
Sbjct: 163 AKPTLKELSLSNNTLGDTAVKQL 185
Score = 87 (35.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 32/148 (21%), Positives = 65/148 (43%)
Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRHLNLNDNTITYKGAIPLGQ 371
L A + TL+ + + N + + L E + +L L+L + IT +
Sbjct: 157 LNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLVEASCDLELLHLENCGITSDSCRDISA 216
Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAK-YLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
LS PSL L +GD + G + + + L N ++ + L +++ DL +
Sbjct: 217 VLSSKPSLLDLAVGDNKIGDTGLALLCQGLLHPNCKIQKLWLWDCDLTSASCKDLSRVFS 276
Query: 431 NKTKLKQINVSENQFGEEGVEEMEKLMK 458
K L ++++ +N + G+E + + +K
Sbjct: 277 TKETLLEVSLIDNNLRDSGMEMLCQALK 304
Score = 82 (33.9 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 31/149 (20%), Positives = 66/149 (44%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
A + +K+ + + + LS N L+ L LN+N + G L + L
Sbjct: 16 AELLSTMKSCSTIRLDDCNLSSSNCKDLSSIIHTNPSLKELKLNNNELGDAGIEYLCKGL 75
Query: 63 SKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
PS ++ L L +C L SA ++ L+ +L ++++ N++ G L + + N
Sbjct: 76 LT-PSCSLQKLWLQNCNLTSASCETLRSVLSAQPSLTELHVGDNKLGTAGVKVLCQGLMN 134
Query: 121 KT-KLKQINVSENQFGEEGVEEMEKLMKS 148
KL+++ + + + VE + +++
Sbjct: 135 PNCKLQKLQLEYCELTADIVEALNAALQA 163
Score = 81 (33.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAF-EENKKLRHLNLNDNTITYKGAIPLGQ 60
L +V +L + + N + G+ L N KL+ L L +T L
Sbjct: 100 LRSVLSAQPSLTELHVGDNKLGTAGVKVLCQGLMNPNCKLQKLQLEYCELTADIVEALNA 159
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK 119
AL P+L L+L + L + + L + + LE ++L I+ D+ +
Sbjct: 160 ALQAKPTLKELSLSNNTLGDTAVKQLCRGLVEASCDLELLHLENCGITSDSCRDISAVLS 219
Query: 120 NKTKLKQINVSENQFGEEGV 139
+K L + V +N+ G+ G+
Sbjct: 220 SKPSLLDLAVGDNKIGDTGL 239
Score = 58 (25.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLT-CNEISVQGGLDLVKAMKNKTKLKQINVSENQ 133
D + S A+ L+ + + L CN +S DL + LK++ ++ N+
Sbjct: 4 DIQCEEMNPSRWAELLSTMKSCSTIRLDDCN-LSSSNCKDLSSIIHTNPSLKELKLNNNE 62
Query: 134 FGEEGVEEMEK 144
G+ G+E + K
Sbjct: 63 LGDAGIEYLCK 73
Score = 39 (18.8 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 98 DVNLTCNEISVQGGLDLVKAMKNKT--KLKQINVSEN 132
D+++ C E++ +L+ MK+ + +L N+S +
Sbjct: 2 DLDIQCEEMNPSRWAELLSTMKSCSTIRLDDCNLSSS 38
>TAIR|locus:2099207 [details] [associations]
symbol:RANGAP1 "AT3G63130" species:3702 "Arabidopsis
thaliana" [GO:0005098 "Ran GTPase activator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000072 "M phase specific
microtubule process" evidence=TAS] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA;TAS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009504 "cell plate" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0032153 "cell division
site" evidence=IDA] [GO:0000280 "nuclear division" evidence=RCA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0006406 "mRNA export from nucleus" evidence=RCA]
[GO:0006913 "nucleocytoplasmic transport" evidence=RCA] [GO:0007000
"nucleolus organization" evidence=RCA] [GO:0009407 "toxin catabolic
process" evidence=RCA] [GO:0031048 "chromatin silencing by small
RNA" evidence=RCA] [GO:0048527 "lateral root development"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
GO:GO:0005886 GO:GO:0009507 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005819 GO:GO:0032153 GO:GO:0005096
GO:GO:0043547 GO:GO:0031965 GO:GO:0000910 GO:GO:0006606
GO:GO:0009524 GO:GO:0009504 EMBL:AL163816 UniGene:At.48804
UniGene:At.5159 GO:GO:0000072 InterPro:IPR025265 Pfam:PF13943
EMBL:AF214559 EMBL:AY034918 EMBL:AY150448 IPI:IPI00544809
PIR:T48102 RefSeq:NP_001190166.1 RefSeq:NP_191872.1 HSSP:P41391
ProteinModelPortal:Q9LE82 SMR:Q9LE82 DIP:DIP-46423N IntAct:Q9LE82
STRING:Q9LE82 PaxDb:Q9LE82 PRIDE:Q9LE82 EnsemblPlants:AT3G63130.1
EnsemblPlants:AT3G63130.2 GeneID:825488 KEGG:ath:AT3G63130
TAIR:At3g63130 eggNOG:COG5238 HOGENOM:HOG000241563
InParanoid:Q9LE82 KO:K14319 OMA:DFQPRTF PhylomeDB:Q9LE82
ProtClustDB:CLSN2684304 Genevestigator:Q9LE82 Uniprot:Q9LE82
Length = 535
Score = 168 (64.2 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 66/244 (27%), Positives = 103/244 (42%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
L +N G G +A+++R C + G L++AL C K
Sbjct: 270 LQFHNNMTGDEGATAIAEIVRE--CPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKK-- 325
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
L L+ N EG LA L L + M + G ALS+A ++
Sbjct: 326 ---LDLR-----DNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSA 377
Query: 350 -NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
+L L L N IT K L ++ SLA LNL + LK G IAK + + L
Sbjct: 378 PSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQLV 437
Query: 409 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 468
+V+L+ N I G L + + K K +N++ N EEG++E+ + K + + L
Sbjct: 438 EVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFISEEGIDEVNDMFKDC-LDKLVPL 496
Query: 469 EDDE 472
+D++
Sbjct: 497 DDND 500
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/148 (31%), Positives = 70/148 (47%)
Query: 4 AVFKKLKTLEH---VEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLG 59
A+ K L L H + M + G ALS+A ++ L L L N IT K L
Sbjct: 340 ALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLA 399
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
++ SLA LNL + LK G IAK + + L +V+L+ N I G L + +
Sbjct: 400 ACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQLVEVDLSTNMIRRAGARALAQTVV 459
Query: 120 NKTKLKQINVSENQFGEEGVEEMEKLMK 147
K K +N++ N EEG++E+ + K
Sbjct: 460 KKNTFKLLNINGNFISEEGIDEVNDMFK 487
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/166 (25%), Positives = 82/166 (49%)
Query: 285 SSKKEGSPLALKVFIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 343
S K + + + L F+AGR E E M ++ + K L + + N + GI A +
Sbjct: 173 SIKDQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSK-LRYLNLSDNALGEKGIRAFAS 231
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
+L L L ++ I+ A + + L + +L + + GA++IA+ + +
Sbjct: 232 LINSQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIVRE 291
Query: 404 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
+LED + I +GG+ L +A+++ + LK++++ +N FG EG
Sbjct: 292 CPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEG 337
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 46/176 (26%), Positives = 80/176 (45%)
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
SS EGS L + N L +G + A++ LE + + +GI A+ +
Sbjct: 203 SSALEGSKL--RYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVREL 260
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
+R L ++N +GA + + + + PSL + S G ++A+ L
Sbjct: 261 LPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHC 320
Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKS 459
+ L+ ++L N V+GG+ L K + T L +I +S +EG E + E L+KS
Sbjct: 321 SHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKS 376
Score = 147 (56.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A + ++ +LE I G AL++A E L+ L+L DN +G I L +
Sbjct: 285 IAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKT 344
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKN 120
LS L L + + L+ G ++++ L + +LE + L N+I+V+ +L + +
Sbjct: 345 LSVLTHLTEIYMSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDITVKSTGNLAACIAS 404
Query: 121 KTKLKQINVSENQFGEEG 138
K L ++N+SEN+ +EG
Sbjct: 405 KQSLAKLNLSENELKDEG 422
Score = 134 (52.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 31/127 (24%), Positives = 64/127 (50%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
L ++ + N + GI A + L L L ++ I+ A + + L + +L
Sbjct: 211 LRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVL 270
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
+ + GA++IA+ + + +LED + I +GG+ L +A+++ + LK++++ +
Sbjct: 271 QFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRD 330
Query: 132 NQFGEEG 138
N FG EG
Sbjct: 331 NMFGVEG 337
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/147 (25%), Positives = 69/147 (46%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
A++ LE + + +GI A+ + K+R L ++N +GA + + +
Sbjct: 230 ASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVLQFHNNMTGDEGATAIAEIV 289
Query: 63 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
+ PSL + S G ++A+ L + L+ ++L N V+GG+ L K + T
Sbjct: 290 RECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRDNMFGVEGGIALAKTLSVLT 349
Query: 123 KLKQINVSENQFGEEGVEEM-EKLMKS 148
L +I +S +EG E + E L+KS
Sbjct: 350 HLTEIYMSYLNLEDEGTEALSEALLKS 376
Score = 96 (38.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+ L +LDL DN FG G LA L S G + LS+AL
Sbjct: 321 SHLKKLDLRDNMFGVEGGIALAKTL--SVLTHLTEIYMSYLNLEDEGTEALSEAL----- 373
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
+ +P +L+V N + + LAA ++L ++ + +N + G ++ A
Sbjct: 374 ---LKSAP-SLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKA 429
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 403
E + L ++L+ N I GA L Q + K + +LN+ + G + D
Sbjct: 430 VEGHDQLVEVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFISEEGIDEVNDMFKD 488
Score = 81 (33.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/103 (22%), Positives = 42/103 (40%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
E KLR+LNL+DN + KG ++ L L L + + A ++ + L
Sbjct: 207 EGSKLRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDK 266
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
+ + N +G + + ++ L+ S + G EG
Sbjct: 267 IRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEG 309
Score = 69 (29.3 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 18/80 (22%), Positives = 36/80 (45%)
Query: 68 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
L LNL D L G + A + LE++ L + IS + + + + K++ +
Sbjct: 211 LRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVL 270
Query: 128 NVSENQFGEEGVEEMEKLMK 147
N G+EG + ++++
Sbjct: 271 QFHNNMTGDEGATAIAEIVR 290
Score = 65 (27.9 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 37/152 (24%), Positives = 62/152 (40%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
ML + + + VE+ ++G I+ S AF E ++ R L L PL
Sbjct: 96 MLDVIKRGPQEESEVEVSKDGDVFFDISGGSRAFIEEEEARDL-LR----------PLAD 144
Query: 61 ALSKLPSLAILN--LGDCLLKSAGA--SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
+ + N G K A + SSI LT+ L D E +++
Sbjct: 145 PRNSYTKIRFSNRSFGSEAAKFAASVLSSIKDQLTE-VDLSDFVAGRPEAEALEVMNMFS 203
Query: 117 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
+ +KL+ +N+S+N GE+G+ L+ S
Sbjct: 204 SALEGSKLRYLNLSDNALGEKGIRAFASLINS 235
Score = 62 (26.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 224 GARLVELDLSDNAFGPIGVEGLADLLRS 251
G++L L+LSDNA G G+ A L+ S
Sbjct: 208 GSKLRYLNLSDNALGEKGIRAFASLINS 235
>UNIPROTKB|E2RJ74 [details] [associations]
symbol:NLRP14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524 GO:GO:0007283
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 InterPro:IPR003590
SMART:SM00368 EMBL:AAEX03012879 EMBL:AAEX03012880
Ensembl:ENSCAFT00000010803 OMA:KSPECKL Uniprot:E2RJ74
Length = 1094
Score = 140 (54.3 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 63/238 (26%), Positives = 108/238 (45%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + RL L L+DN G GV+ + D L+ C ++ + LS AL
Sbjct: 841 LISNKRLTHLCLADNILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSS-EHLSSALL 899
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
C +S + L + G N ++++G K+L F+ L+ +E+ + +
Sbjct: 900 -CNKSL------IHLDL---GSNWIQDDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCL 949
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSI 397
L+ A N +L++L+L N + G L +AL + P+ I LG C L S +
Sbjct: 950 DLASAILNNSHLQNLDLGHNDLRDDGVKILCEAL-RHPNCNIQRLGLEYCGLTSLCCQDL 1008
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEME 454
+ L N L +NL N + +G + L + +K+ + KLK + V + F EE + +E
Sbjct: 1009 SYTLRSNQNLIKINLKQNTLGYEGMMKLCEVLKSPECKLKVLGVCKEAFDEEAQKLLE 1066
Score = 106 (42.4 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 35/140 (25%), Positives = 71/140 (50%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
+ L H+++ + I G+ +L +A + + KL++L+L +T + + +AL + SL
Sbjct: 731 QNLMHLDLKGSDIGDDGVKSLCEALKHPECKLQNLSLESCGLTTLCCLNISKALIRSQSL 790
Query: 69 AILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
LNL L G + + L LE ++L ++V G DL A+ + +L +
Sbjct: 791 RFLNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESCGLTVAGCEDLSLALISNKRLTHL 850
Query: 128 NVSENQFGEEGVEEMEKLMK 147
+++N G++GV+ + +K
Sbjct: 851 CLADNILGDDGVKLVNDALK 870
Score = 106 (42.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 37/141 (26%), Positives = 66/141 (46%)
Query: 321 KTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSL 379
K+L +++ N I GI L DAF NL+ L L +T + L A+ L
Sbjct: 902 KSLIHLDLGSNWIQDDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCLDLASAILNNSHL 961
Query: 380 AILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
L+LG L+ G + + L N ++ + L ++ DL +++ L +I
Sbjct: 962 QNLDLGHNDLRDDGVKILCEALRHPNCNIQRLGLEYCGLTSLCCQDLSYTLRSNQNLIKI 1021
Query: 439 NVSENQFGEEGVEEMEKLMKS 459
N+ +N G EG+ ++ +++KS
Sbjct: 1022 NLKQNTLGYEGMMKLCEVLKS 1042
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/101 (31%), Positives = 44/101 (43%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LA 69
LE + + G+ G LS A NK+L HL L DN + G + AL K P L
Sbjct: 819 LERLSLESCGLTVAGCEDLSLALISNKRLTHLCLADNILGDDGVKLVNDAL-KHPQCKLQ 877
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
L L C S + ++ L N +L ++L N I G
Sbjct: 878 SLVLRRCHFTSLSSEHLSSALLCNKSLIHLDLGSNWIQDDG 918
Score = 78 (32.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/139 (25%), Positives = 62/139 (44%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LA 69
L+++ + G+ + +S A ++ LR LNL+ N + G L +AL P L
Sbjct: 762 LQNLSLESCGLTTLCCLNISKALIRSQSLRFLNLSTNHLLDDGVKLLCEALGH-PKCHLE 820
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK-AMKN-KTKLKQI 127
L+L C L AG ++ L N L + L N + G+ LV A+K+ + KL+ +
Sbjct: 821 RLSLESCGLTVAGCEDLSLALISNKRLTHLCLADNILG-DDGVKLVNDALKHPQCKLQSL 879
Query: 128 NVSENQFGEEGVEEMEKLM 146
+ F E + +
Sbjct: 880 VLRRCHFTSLSSEHLSSAL 898
Score = 60 (26.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 35/134 (26%), Positives = 57/134 (42%)
Query: 2 LAAVFKK-LKTLEHVEMPQN---GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIP 57
+ VF+K L + EM Q I H L N+ LR L+L + +
Sbjct: 636 VTVVFEKTLNSSPPAEMWQKDDGSIIHCW-QDLCSVLHTNEHLRELDLCHSNLDELAMKT 694
Query: 58 LGQALSKLPSLAILNLGDCLLK-SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
Q L + P+ + L L G IA LT N L ++L ++I G L +
Sbjct: 695 FYQEL-RHPNCKLQRLLMRFLSFPGGCQDIASSLTHNQNLMHLDLKGSDIGDDGVKSLCE 753
Query: 117 AMKN-KTKLKQINV 129
A+K+ + KL+ +++
Sbjct: 754 ALKHPECKLQNLSL 767
Score = 48 (22.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 106 ISVQGGL-DLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
+S GG D+ ++ + L +++ + G++GV+ + + +K
Sbjct: 714 LSFPGGCQDIASSLTHNQNLMHLDLKGSDIGDDGVKSLCEALK 756
>UNIPROTKB|F1RMK8 [details] [associations]
symbol:LOC100622751 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 OMA:QEVWLLI
EMBL:FP102565 Ensembl:ENSSSCT00000003680 Uniprot:F1RMK8
Length = 1178
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 42/129 (32%), Positives = 61/129 (47%)
Query: 304 RLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
RL+ E M K LE + + + G+ H ALS + +L+ L+L N +T
Sbjct: 827 RLKEEDVVMACEAIKHPNCQLESLRLDRCGLTHSSCLALSQVLVTSVSLKSLSLAGNKVT 886
Query: 363 YKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
PL AL S +L L LGDC L +A + +A LT N +L + L N + +G
Sbjct: 887 DPSIKPLCDALRSTQCTLQKLILGDCGLTAADSQDLASALTKNQSLTHLYLASNSLGSEG 946
Query: 422 GLDLVKAMK 430
L +AMK
Sbjct: 947 VNLLGRAMK 955
Score = 126 (49.4 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 59/235 (25%), Positives = 102/235 (43%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L L L+ N+ G GV L ++ C + + GC L+ AL
Sbjct: 932 LTHLYLASNSLGSEGVNLLGRAMKLPNC-SLQRLILNACNLDVAGCGFLAFAL-----MG 985
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAF 345
+ + L+L V N LE++G K+L V + L+ +E+ + + +LS
Sbjct: 986 NRRLTHLSLSV-----NPLEDDGMKLLCEVMMEPSCHLQDLELVKCQLTATCCKSLSHVI 1040
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
NK+L+ L+L N + G L + L + SL L L C L S +++ L+ +
Sbjct: 1041 TRNKHLQSLDLAANALGDNGIEVLCEGLKQKNSLRRLGLEACELTSGCCEALSSALSGSE 1100
Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEG---VEEMEKL 456
L +NL N S+ G L A T L+ + + + Q+ + +EE+++L
Sbjct: 1101 HLTSLNLMQNNFSLGGMTKLCSAFAQPTCDLQMLGLWKWQYPAQMRRLLEELQRL 1155
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 58/224 (25%), Positives = 95/224 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITG-CKLLSKAL 279
L T L L L+ N ++ L D LRS+ C I G C L +
Sbjct: 869 LVTSVSLKSLSLAGNKVTDPSIKPLCDALRSTQC---------TLQKLILGDCGLTAADS 919
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGI 338
D + K S L ++A N L +EG +L K +L+R+ + + G
Sbjct: 920 QDLASALTKNQSLTHL--YLAS-NSLGSEGVNLLGRAMKLPNCSLQRLILNACNLDVAGC 976
Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASS 396
L+ A N+ L HL+L+ N + G L + + + PS L L L C L + S
Sbjct: 977 GFLAFALMGNRRLTHLSLSVNPLEDDGMKLLCEVMME-PSCHLQDLELVKCQLTATCCKS 1035
Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
++ +T N L+ ++L N + G L + +K K L+++ +
Sbjct: 1036 LSHVITRNKHLQSLDLAANALGDNGIEVLCEGLKQKNSLRRLGL 1079
Score = 121 (47.7 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 37/109 (33%), Positives = 54/109 (49%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAI 70
LE + + + G+ H ALS + L+ L+L N +T PL AL S +L
Sbjct: 847 LESLRLDRCGLTHSSCLALSQVLVTSVSLKSLSLAGNKVTDPSIKPLCDALRSTQCTLQK 906
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
L LGDC L +A + +A LT N +L + L N + +G L +AMK
Sbjct: 907 LILGDCGLTAADSQDLASALTKNQSLTHLYLASNSLGSEGVNLLGRAMK 955
>MGI|MGI:1921935 [details] [associations]
symbol:4930451C15Rik "RIKEN cDNA 4930451C15 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1921935 GeneTree:ENSGT00640000091171
EMBL:AK039092 EMBL:AK132588 EMBL:AK143245 EMBL:AK161226
EMBL:BC115678 EMBL:BC115679 IPI:IPI00353515 IPI:IPI00406229
IPI:IPI00677034 RefSeq:NP_001138907.1 RefSeq:NP_083329.2
UniGene:Mm.38634 ProteinModelPortal:Q14BP6 SMR:Q14BP6 PRIDE:Q14BP6
Ensembl:ENSMUST00000023442 Ensembl:ENSMUST00000065125
Ensembl:ENSMUST00000100123 GeneID:74685 KEGG:mmu:74685
UCSC:uc007yle.2 UCSC:uc007ylf.2 eggNOG:NOG126824
HOGENOM:HOG000155712 HOVERGEN:HBG108751 InParanoid:Q14BP6
OMA:ISYNGFG OrthoDB:EOG4868CW NextBio:341384 Bgee:Q14BP6
CleanEx:MM_4930451C15RIK Genevestigator:Q14BP6 Uniprot:Q14BP6
Length = 391
Score = 186 (70.5 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 68/250 (27%), Positives = 112/250 (44%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + + LDL DN G E LAD+LR + + G + + AL
Sbjct: 101 LTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLSENQIGAA--GLQAICTAL- 157
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+P K+ + G NRLE + A+ LAA+ + L+ +++ N + +
Sbjct: 158 --------ALNPTVEKMQLQG-NRLEEQAAQHLAALLLHHRGLKSLDLSYNQLNDLAGEI 208
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L A EN L LNL+ N + GA + L L +L++ +GAS+I
Sbjct: 209 LGPAVAENTGLTELNLSWNHLRGLGATAFARGLEANIFLKVLDISHNGFGDSGASAIGDA 268
Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSF 460
L N LE++N+ N ISV G L L ++ L+ + +S+N +G + K +++
Sbjct: 269 LRVNNVLEELNMRNNRISVSGALKLGLGLQVNQTLRILIISKNPIRSDGCVGLLKSVRN- 327
Query: 461 GMAAALVLED 470
++AL L D
Sbjct: 328 NKSSALELLD 337
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 38/143 (26%), Positives = 74/143 (51%)
Query: 302 RNR-LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
R+R L +G + LA+V ++R+++ NG+ G AL+D +N + ++L++N
Sbjct: 85 RHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLSENQ 144
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
I G + AL+ P++ + L L+ A +A L + L+ ++L+ N+++
Sbjct: 145 IGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALLLHHRGLKSLDLSYNQLNDL 204
Query: 421 GGLDLVKAMKNKTKLKQINVSEN 443
G L A+ T L ++N+S N
Sbjct: 205 AGEILGPAVAENTGLTELNLSWN 227
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/156 (27%), Positives = 75/156 (48%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LAA+ + L+ +++ N + + L A EN L LNL+ N + GA +
Sbjct: 181 LAALLLHHRGLKSLDLSYNQLNDLAGEILGPAVAENTGLTELNLSWNHLRGLGATAFARG 240
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L L +L++ +GAS+I L N LE++N+ N ISV G L L ++
Sbjct: 241 LEANIFLKVLDISHNGFGDSGASAIGDALRVNNVLEELNMRNNRISVSGALKLGLGLQVN 300
Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
L+ + +S+N +G + K +++ ++AL L
Sbjct: 301 QTLRILIISKNPIRSDGCVGLLKSVRN-NKSSALEL 335
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 34/137 (24%), Positives = 60/137 (43%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA V +K + V++ +N I G+ A+ A N + + L N + + A L
Sbjct: 125 LADVLRKNSIISDVDLSENQIGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAAL 184
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L L L+L L + + +NT L ++NL+ N + G + ++
Sbjct: 185 LLHHRGLKSLDLSYNQLNDLAGEILGPAVAENTGLTELNLSWNHLRGLGATAFARGLEAN 244
Query: 122 TKLKQINVSENQFGEEG 138
LK +++S N FG+ G
Sbjct: 245 IFLKVLDISHNGFGDSG 261
Score = 119 (46.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+ + G+ G+ AL+ N ++ L+L DN + GA L L K ++ ++L
Sbjct: 82 LNLRHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLS 141
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ + +AG +I L N T+E + L N + Q L + + LK +++S NQ
Sbjct: 142 ENQIGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALLLHHRGLKSLDLSYNQL 201
Query: 135 GE 136
+
Sbjct: 202 ND 203
Score = 119 (46.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 33/131 (25%), Positives = 66/131 (50%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA+V ++ +++ NG+ G AL+D +N + ++L++N I G + A
Sbjct: 97 LASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLSENQIGAAGLQAICTA 156
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L+ P++ + L L+ A +A L + L+ ++L+ N+++ G L A+
Sbjct: 157 LALNPTVEKMQLQGNRLEEQAAQHLAALLLHHRGLKSLDLSYNQLNDLAGEILGPAVAEN 216
Query: 122 TKLKQINVSEN 132
T L ++N+S N
Sbjct: 217 TGLTELNLSWN 227
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
+ + G+ G+ AL+ N ++ L+L DN + GA L L K ++ ++L
Sbjct: 82 LNLRHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLS 141
Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
+ + +AG +I L N T+E + L N + Q L + + LK +++S NQ
Sbjct: 142 ENQIGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALLLHHRGLKSLDLSYNQL 201
Query: 446 GE 447
+
Sbjct: 202 ND 203
Score = 112 (44.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N L GA A + L+ +++ NG G +A+ DA N L LN+ +N I+
Sbjct: 227 NHLRGLGATAFARGLEANIFLKVLDISHNGFGDSGASAIGDALRVNNVLEELNMRNNRIS 286
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
GA+ LG L +L IL + ++S G + K + +N + L ++I V
Sbjct: 287 VSGALKLGLGLQVNQTLRILIISKNPIRSDGCVGLLKSVRNNKSSALELLDVSDIQVSRE 346
Query: 423 L-DLVKAM 429
DL +M
Sbjct: 347 CEDLASSM 354
Score = 100 (40.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/104 (25%), Positives = 51/104 (49%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
LNL + +G L L+ P + L+L D L AGA ++A L N+ + DV+L+
Sbjct: 82 LNLRHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLS 141
Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
N+I G + A+ ++++ + N+ E+ + + L+
Sbjct: 142 ENQIGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALL 185
Score = 47 (21.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 78 LKSAGASSIAKY--LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
LKS A+S+ L ++NL + QG L + + +K++++ +N
Sbjct: 59 LKSCRANSVVPVSCLLRQEGASELNLRHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLC 118
Query: 136 EEGVEEMEKLMK 147
G E + +++
Sbjct: 119 GAGAEALADVLR 130
>ZFIN|ZDB-GENE-061108-4 [details] [associations]
symbol:nod2 "nucleotide-binding oligomerization
domain containing 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IMP] InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
ZFIN:ZDB-GENE-061108-4 GO:GO:0042981 GO:GO:0042742 GO:GO:0005622
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00660000095240
CTD:64127 KO:K10165 EMBL:CU929130 IPI:IPI01023759
RefSeq:XP_697924.3 UniGene:Dr.93177 Ensembl:ENSDART00000148805
GeneID:777696 KEGG:dre:777696 NextBio:20924266 Bgee:F8W3K2
Uniprot:F8W3K2
Length = 980
Score = 185 (70.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 66/235 (28%), Positives = 114/235 (48%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
LK + V L L +N+ G +GVE L L C + I KLL K +
Sbjct: 754 LKNLRKPVGLQLDNNSVGDVGVEQLLPCL--PMCHSLYLRNNNISDEGIR--KLLEKGI- 808
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+C E+ +K +AL F N+L + + + + K + + + N I VG
Sbjct: 809 EC-ENFQK----IAL--F---NNKLTDTCTQYFSCLLKSKQNFLALRLGNNNITSVGAEQ 858
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L++ N++L+ L L N + +GA L AL+ +L L+L D + SAGA ++AK+
Sbjct: 859 LAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLVDNGVGSAGACALAKF 918
Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 455
+ N +LE++ L N I +G L++A+K T +K++ + N + E++ +
Sbjct: 919 IRQNKSLEELWLNKNSICKEGVDCLIEALKMNTSVKKVWLRGNNLSPQEEEQLSQ 973
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/142 (28%), Positives = 74/142 (52%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
+ + K + + + N I VG L++ N+ L+ L L N + +GA L AL
Sbjct: 832 SCLLKSKQNFLALRLGNNNITSVGAEQLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADAL 891
Query: 63 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
+ +L L+L D + SAGA ++AK++ N +LE++ L N I +G L++A+K T
Sbjct: 892 TNSKTLIWLSLVDNGVGSAGACALAKFIRQNKSLEELWLNKNSICKEGVDCLIEALKMNT 951
Query: 123 KLKQINVSENQFGEEGVEEMEK 144
+K++ + N + E++ +
Sbjct: 952 SVKKVWLRGNNLSPQEEEQLSQ 973
Score = 133 (51.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 292 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 351
P+ +++ N + +EG + L + + +++ + N + S + +N
Sbjct: 783 PMCHSLYLRNNN-ISDEGIRKLLEKGIECENFQKIALFNNKLTDTCTQYFSCLLKSKQNF 841
Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
L L +N IT GA L + LS SL L L + GA +A LT++ TL ++
Sbjct: 842 LALRLGNNNITSVGAEQLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLS 901
Query: 412 LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L N + G L K ++ L+++ +++N +EGV+ + + +K
Sbjct: 902 LVDNGVGSAGACALAKFIRQNKSLEELWLNKNSICKEGVDCLIEALK 948
Score = 52 (23.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 84 SSIAKYLTDNTTLEDVNLT-CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
+SIA+ +E + LT CN V+ L +KN K + + N G+ GVE++
Sbjct: 720 NSIAQDAMAKLDVEHLKLTYCNIGPVECTA-LAYVLKNLRKPVGLQLDNNSVGDVGVEQL 778
>MGI|MGI:1195456 [details] [associations]
symbol:Rnh1 "ribonuclease/angiogenin inhibitor 1"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=ISO]
[GO:0032311 "angiogenin-PRI complex" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0045765 "regulation of angiogenesis" evidence=ISO]
MGI:MGI:1195456 GO:GO:0005737 GO:GO:0045765 GO:GO:0008428
GO:GO:0032311 eggNOG:NOG309390 InterPro:IPR003590 SMART:SM00368
CTD:6050 HOGENOM:HOG000140402 HOVERGEN:HBG001059 KO:K16634
OMA:MEDRLQA OrthoDB:EOG4DZ1VG ChiTaRS:RNH1 EMBL:AF071546
EMBL:AK133822 EMBL:AK141351 EMBL:AK147059 EMBL:BC010331
IPI:IPI00313296 RefSeq:NP_001165571.1 RefSeq:NP_001165572.1
RefSeq:NP_660117.2 UniGene:Mm.279485 PDB:3TSR PDBsum:3TSR
ProteinModelPortal:Q91VI7 SMR:Q91VI7 IntAct:Q91VI7 STRING:Q91VI7
PhosphoSite:Q91VI7 UCD-2DPAGE:Q91VI7 PaxDb:Q91VI7 PRIDE:Q91VI7
Ensembl:ENSMUST00000106033 Ensembl:ENSMUST00000167493 GeneID:107702
KEGG:mmu:107702 UCSC:uc009kjs.2 GeneTree:ENSGT00670000097902
InParanoid:Q91VI7 NextBio:359282 Bgee:Q91VI7 CleanEx:MM_RNH1
Genevestigator:Q91VI7 GermOnline:ENSMUSG00000038650 Uniprot:Q91VI7
Length = 456
Score = 154 (59.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 65/236 (27%), Positives = 112/236 (47%)
Query: 225 ARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 283
A L ELDLS N G G+ L LL SC GCK L + L
Sbjct: 222 ASLQELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAE--GCKDLCRVLRA-- 277
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALS 342
+ S KE L+L N L++EGA++L ++ + LE + + +
Sbjct: 278 KQSLKE---LSL-----ASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFC 329
Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 401
++++L L ++ N + +G L +ALS+ + L L LGDC + ++G SS+A L
Sbjct: 330 SVLTKSRSLLELQMSSNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVL 389
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKL 456
N +L +++L+ N + G L L++++K + L+Q+ + + + E E++ L
Sbjct: 390 LANRSLRELDLSNNCMGGPGVLQLLESLKQPSCTLQQLVLYDIYWTNEVEEQLRAL 445
Score = 116 (45.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 51/212 (24%), Positives = 89/212 (41%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L++ + L EL L+DN G G++ L + L+ C T C+ L+ L
Sbjct: 104 LRSLSTLRELHLNDNPMGDAGLKLLCEGLQDPQC-RLEKLQLEYCNLTATSCEPLASVLR 162
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
++ KE + N L G ++L K LE +++ GI
Sbjct: 163 --VKADFKE--------LVLSNNDLHEPGVRILCQGLKDSACQLESLKLENCGITAANCK 212
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSI 397
L D +L+ L+L+ N + G L L LPS L L L +C + + G +
Sbjct: 213 DLCDVVASKASLQELDLSSNKLGNAGIAALCPGLL-LPSCKLRTLWLWECDITAEGCKDL 271
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+ L +L++++L NE+ +G L +++
Sbjct: 272 CRVLRAKQSLKELSLASNELKDEGARLLCESL 303
Score = 101 (40.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 44/162 (27%), Positives = 73/162 (45%)
Query: 304 RLENEG-----AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE-ENKNLRHLNLN 357
+LEN G K L V +L+ +++ N + + GI AL + LR L L
Sbjct: 200 KLENCGITAANCKDLCDVVASKASLQELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLW 259
Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNL-TCN 415
+ IT +G L + L SL L+L LK GA + + L + LE + + TC+
Sbjct: 260 ECDITAEGCKDLCRVLRAKQSLKELSLASNELKDEGARLLCESLLEPGCQLESLWIKTCS 319
Query: 416 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
++ + L ++ +S N G+EGV+E+ K +
Sbjct: 320 -LTAASCPYFCSVLTKSRSLLELQMSSNPLGDEGVQELCKAL 360
Score = 75 (31.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAM 118
+ L + ++ L DC L I+ + N L +++L NE+ GG+ LV + +
Sbjct: 17 ELLPLIQQYEVVRLDDCGLTEVRCKDISSAVQANPALTELSLRTNELG-DGGVGLVLQGL 75
Query: 119 KNKT-KLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
+N T K++++++ E G + +++S L L
Sbjct: 76 QNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHL 115
Score = 66 (28.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 30/118 (25%), Positives = 50/118 (42%)
Query: 19 QN-GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGD 75
QN G+ G L LR L+LNDN + G L + L P + L L
Sbjct: 88 QNCGLTEAGCGILPGMLRSLSTLRELHLNDNPMGDAGLKLLCEGLQD-PQCRLEKLQLEY 146
Query: 76 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSEN 132
C L + +A L +++ L+ N++ G L + +K+ +L+ + + EN
Sbjct: 147 CNLTATSCEPLASVLRVKADFKELVLSNNDLHEPGVRILCQGLKDSACQLESLKL-EN 203
>UNIPROTKB|Q9Y239 [details] [associations]
symbol:NOD1 "Nucleotide-binding oligomerization
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IDA;TAS] [GO:0016323 "basolateral plasma
membrane" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA;TAS]
[GO:0006917 "induction of apoptosis" evidence=IDA] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IDA;IPI] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IDA] [GO:0050700 "CARD
domain binding" evidence=IDA] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=TAS] [GO:0009595
"detection of biotic stimulus" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0035556 "intracellular signal
transduction" evidence=IDA] [GO:0006952 "defense response"
evidence=TAS] [GO:0042834 "peptidoglycan binding" evidence=TAS]
[GO:0051259 "protein oligomerization" evidence=TAS] [GO:0006954
"inflammatory response" evidence=TAS] [GO:0016045 "detection of
bacterium" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=IDA] [GO:0042228 "interleukin-8 biosynthetic
process" evidence=IDA] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=TAS] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0002756 "MyD88-independent
toll-like receptor signaling pathway" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0034130
"toll-like receptor 1 signaling pathway" evidence=TAS] [GO:0034134
"toll-like receptor 2 signaling pathway" evidence=TAS] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=TAS] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=TAS] [GO:0035666
"TRIF-dependent toll-like receptor signaling pathway" evidence=TAS]
[GO:0035872 "nucleotide-binding domain, leucine rich repeat
containing receptor signaling pathway" evidence=TAS] [GO:0045087
"innate immune response" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0070423
"nucleotide-binding oligomerization domain containing signaling
pathway" evidence=TAS] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=ISS]
Reactome:REACT_6782 InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
GO:GO:0051259 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0007254
GO:GO:0016324 GO:GO:0043123 GO:GO:0042742 GO:GO:0006954
GO:GO:0070374 GO:GO:0046330 GO:GO:0045087 GO:GO:0016323
GO:GO:0032755 GO:GO:0000187 GO:GO:0042802 GO:GO:0051092
GO:GO:0008656 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0042834 GO:GO:0032760 GO:GO:0002755 GO:GO:0008063
GO:GO:0034130 GO:GO:0034134 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0050700 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0070423 GO:GO:0002606 EMBL:AF126484 EMBL:AF149774
EMBL:AF113925 EMBL:AC006027 EMBL:BC040339 IPI:IPI00005776
RefSeq:NP_006083.1 UniGene:Hs.405153 PDB:2B1W PDB:2DBD PDB:2NSN
PDB:2NZ7 PDB:4E9M PDBsum:2B1W PDBsum:2DBD PDBsum:2NSN PDBsum:2NZ7
PDBsum:4E9M ProteinModelPortal:Q9Y239 SMR:Q9Y239 DIP:DIP-41064N
IntAct:Q9Y239 MINT:MINT-90728 STRING:Q9Y239 PhosphoSite:Q9Y239
DMDM:20137579 PaxDb:Q9Y239 PRIDE:Q9Y239 Ensembl:ENST00000222823
GeneID:10392 KEGG:hsa:10392 UCSC:uc003tav.3 CTD:10392
GeneCards:GC07M030464 HGNC:HGNC:16390 MIM:605980 neXtProt:NX_Q9Y239
PharmGKB:PA162398098 eggNOG:NOG275503 HOGENOM:HOG000113813
HOVERGEN:HBG050793 InParanoid:Q9Y239 KO:K08727 OMA:NDYGVRE
OrthoDB:EOG4WH8K2 PhylomeDB:Q9Y239 BindingDB:Q9Y239
ChEMBL:CHEMBL1293222 EvolutionaryTrace:Q9Y239 GenomeRNAi:10392
NextBio:39370 ArrayExpress:Q9Y239 Bgee:Q9Y239 CleanEx:HS_NOD1
Genevestigator:Q9Y239 GermOnline:ENSG00000106100 GO:GO:0042228
Uniprot:Q9Y239
Length = 953
Score = 176 (67.0 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 42/156 (26%), Positives = 82/156 (52%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + G K+L+ K K + + + N I VG ++ +E K L HL L N IT
Sbjct: 738 NQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKIT 797
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+G L A+ S++ + + + GA + A+ L ++ +L ++L N IS +GG
Sbjct: 798 SEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGG 857
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L +A++ T L+ + +++N+ +E E + +++K
Sbjct: 858 KSLARALQQNTSLEILWLTQNELNDEVAESLAEMLK 893
Score = 172 (65.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 53/162 (32%), Positives = 84/162 (51%)
Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
G+N++ +EG K LA K K++ V M N + G A ++A + +L L+L N
Sbjct: 792 GKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNG 851
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
I+ +G L +AL + SL IL L L A S+A+ L N TL+ + L N+I+ +
Sbjct: 852 ISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAK 911
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFG-EEG-VEEMEKLMKSF 460
G L A+++ T + +I ++ N EE V E EK + F
Sbjct: 912 GTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953
Score = 160 (61.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 39/147 (26%), Positives = 77/147 (52%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+L+ K K + ++ + N I VG ++ +E K L HL L N IT +G L
Sbjct: 747 VLSEELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLAL 806
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
A+ S++ + + + GA + A+ L ++ +L ++L N IS +GG L +A++
Sbjct: 807 AVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQ 866
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
T L+ + +++N+ +E E + +++K
Sbjct: 867 NTSLEILWLTQNELNDEVAESLAEMLK 893
Score = 159 (61.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 41/157 (26%), Positives = 82/157 (52%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + GA+ + + + K L +++ +N I G L+ A + +K++ + + N +
Sbjct: 766 NQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVG 825
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+GA +AL PSL L+L + + G S+A+ L NT+LE + LT NE++ +
Sbjct: 826 DEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVA 885
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
L + +K LK + + +NQ +G ++ ++S
Sbjct: 886 ESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQS 922
Score = 148 (57.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 39/144 (27%), Positives = 74/144 (51%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
+ + K L H+++ +N I G L+ A + +K + + + N + +GA +AL
Sbjct: 779 ILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRN 838
Query: 65 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
PSL L+L + + G S+A+ L NT+LE + LT NE++ + L + +K L
Sbjct: 839 HPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTL 898
Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
K + + +NQ +G ++ ++S
Sbjct: 899 KHLWLIQNQITAKGTAQLADALQS 922
Score = 138 (53.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 48/150 (32%), Positives = 74/150 (49%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA K K++ V M N + G A ++A + L L+L N I+ +G L +A
Sbjct: 804 LALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLSLASNGISTEGGKSLARA 863
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + SL IL L L A S+A+ L N TL+ + L N+I+ +G L A+++
Sbjct: 864 LQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADALQSN 923
Query: 122 TKLKQINVSENQFG-EEG-VEEMEKLMKSF 149
T + +I ++ N EE V E EK + F
Sbjct: 924 TGITEICLNGNLIKPEEAKVYEDEKRIICF 953
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/170 (24%), Positives = 80/170 (47%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N L + G + L F +L L R+ + N I G+ LS+ + K + +L L +N IT
Sbjct: 713 NNLNDYGVRELQPCFSRLTVL-RLSV--NQITDGGVKVLSEELTKYKIVTYLGLYNNQIT 769
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
GA + + L + L L LG + S G +A + ++ ++ +V + N++ +G
Sbjct: 770 DVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGA 829
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDE 472
+A++N L ++++ N EG + + + ++ L L +E
Sbjct: 830 KAFAEALRNHPSLTTLSLASNGISTEGGKSLARALQQNTSLEILWLTQNE 879
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+++ N + G+ L F +L L L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVRELQPCFS---RLTVLRLSVNQITDGGVKVLSEELTKYKIVTYLGLY 764
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ + GA + K L + L + L N+I+ +GG L A+KN + ++ + NQ
Sbjct: 765 NNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQV 824
Query: 135 GEEGVEEMEKLMKSFGMAAALVL 157
G+EG + + +++ L L
Sbjct: 825 GDEGAKAFAEALRNHPSLTTLSL 847
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 34/146 (23%), Positives = 69/146 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L F +L L + N I G+ LS+ + K + +L L +N IT GA + +
Sbjct: 723 LQPCFSRLTVLR---LSVNQITDGGVKVLSEELTKYKIVTYLGLYNNQITDVGARYVTKI 779
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + L L LG + S G +A + ++ ++ +V + N++ +G +A++N
Sbjct: 780 LDECKGLTHLKLGKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNH 839
Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
L ++++ N EG + + + ++
Sbjct: 840 PSLTTLSLASNGISTEGGKSLARALQ 865
Score = 63 (27.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 26/121 (21%), Positives = 51/121 (42%)
Query: 28 TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
+ALS K L+L++N + G L S+L +L L + G ++
Sbjct: 693 SALSFVLHHFPKRLALDLDNNNLNDYGVRELQPCFSRL---TVLRLSVNQITDGGVKVLS 749
Query: 88 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
+ LT + + L N+I+ G + K + L + + +N+ EG + + +K
Sbjct: 750 EELTKYKIVTYLGLYNNQITDVGARYVTKILDECKGLTHLKLGKNKITSEGGKYLALAVK 809
Query: 148 S 148
+
Sbjct: 810 N 810
>UNIPROTKB|Q86WI3 [details] [associations]
symbol:NLRC5 "Protein NLRC5" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=IMP;IDA]
[GO:0060340 "positive regulation of type I interferon-mediated
signaling pathway" evidence=IDA] [GO:0045087 "innate immune
response" evidence=IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0060339 "negative regulation of type I
interferon-mediated signaling pathway" evidence=IDA] [GO:0051607
"defense response to virus" evidence=IEP] [GO:0043549 "regulation
of kinase activity" evidence=IDA] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0032480 "negative
regulation of type I interferon production" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IDA] [GO:0000979 "RNA polymerase II
core promoter sequence-specific DNA binding" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_6900 GO:GO:0045944 GO:GO:0045087
GO:GO:0051607 GO:GO:0032088 InterPro:IPR025875 Pfam:PF12799
GO:GO:0000979 GO:GO:0032480 GO:GO:0043549 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0045345 GO:GO:0060339 GO:GO:0060340
GO:GO:0060335 HSSP:P10775 eggNOG:NOG265451 EMBL:AF389420
EMBL:EF452236 EMBL:AK074133 EMBL:AK074182 EMBL:AC009090
EMBL:AC023825 EMBL:AK090439 EMBL:BC050527 EMBL:BC063566
EMBL:AK027414 EMBL:AK027416 IPI:IPI00329085 IPI:IPI00383061
IPI:IPI00641739 IPI:IPI00647281 IPI:IPI00789837 IPI:IPI00854610
RefSeq:NP_115582.4 UniGene:Hs.528836 ProteinModelPortal:Q86WI3
SMR:Q86WI3 IntAct:Q86WI3 STRING:Q86WI3 DMDM:269849666 PaxDb:Q86WI3
PRIDE:Q86WI3 DNASU:84166 Ensembl:ENST00000262510
Ensembl:ENST00000308149 Ensembl:ENST00000436936
Ensembl:ENST00000539144 Ensembl:ENST00000539881 GeneID:84166
KEGG:hsa:84166 UCSC:uc021tit.1 UCSC:uc021tiu.1 CTD:84166
GeneCards:GC16P057023 HGNC:HGNC:29933 MIM:613537 neXtProt:NX_Q86WI3
PharmGKB:PA162397694 HOVERGEN:HBG108194 InParanoid:Q86WI3
OMA:EILLSWN OrthoDB:EOG4Z0B4Q PhylomeDB:Q86WI3 ChiTaRS:NLRC5
GenomeRNAi:84166 NextBio:73516 ArrayExpress:Q86WI3 Bgee:Q86WI3
CleanEx:HS_NLRC5 Genevestigator:Q86WI3 Uniprot:Q86WI3
Length = 1866
Score = 135 (52.6 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 39/157 (24%), Positives = 76/157 (48%)
Query: 303 NRLENEGAK--MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
N E++ A +L ++ L L+ + + + G+ L+ +L L+L++N
Sbjct: 1474 NLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQ 1533
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
+G L +AL L L+L LL S+ + + L+ T L+ + L N I
Sbjct: 1534 FDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDV 1593
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
G L +A++ T L+++++S NQ G+ GV+ + ++
Sbjct: 1594 GCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATIL 1630
Score = 129 (50.5 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 36/146 (24%), Positives = 70/146 (47%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+L ++ L L+ + + + G+ L+ L L+L++N +G L +
Sbjct: 1485 LLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMR 1544
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
AL L L+L LL S+ + + L+ T L+ + L N I G L +A++
Sbjct: 1545 ALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRA 1604
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLM 146
T L+++++S NQ G+ GV+ + ++
Sbjct: 1605 ATSLEELDLSHNQIGDAGVQHLATIL 1630
Score = 122 (48.0 bits), Expect = 3.9e-05, Sum P(4) = 3.9e-05
Identities = 37/145 (25%), Positives = 67/145 (46%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N+ + EG K L + L+R+++ + + L+ + L+ L LN N+I
Sbjct: 1532 NQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIG 1591
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
G L +AL SL L+L + AG +A L L ++L+ N IS GG
Sbjct: 1592 DVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGG 1651
Query: 423 LDLVKAMKNKTKLKQINVSENQFGE 447
+ L +++ +L+++ + N G+
Sbjct: 1652 VQLAESLVLCRRLEELMLGCNALGD 1676
Score = 118 (46.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 36/142 (25%), Positives = 68/142 (47%)
Query: 302 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
RN + + G L+ + +LE +++ N I G+ L+ LR ++L+ N+I
Sbjct: 1587 RNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDLSGNSI 1646
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
+ G + L ++L L L LG L A +A+ L + L ++L + + G
Sbjct: 1647 SSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQH--LRVLHLPFSHLGPGG 1704
Query: 422 GLDLVKAMKNKTKLKQINVSEN 443
L L +A+ L++I+++EN
Sbjct: 1705 ALSLAQALDGSPHLEEISLAEN 1726
Score = 116 (45.9 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 42/164 (25%), Positives = 72/164 (43%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
LK F + + EG LA+ LE +++ N G AL A E L+ L
Sbjct: 1496 LKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWMLKRL 1555
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
+L+ + L LS++ L L L + G +++ L T+LE+++L+
Sbjct: 1556 DLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSH 1615
Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG-VEEMEKLM 457
N+I G L + +L++I++S N G V+ E L+
Sbjct: 1616 NQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLV 1659
Score = 111 (44.1 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 46/183 (25%), Positives = 83/183 (45%)
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
G P K+ ++G N + + G LA + LE + + N + TAL A E +
Sbjct: 1632 GLPELRKIDLSG-NSISSAGGVQLAESLVLCRRLEELMLGCNALGDP--TALGLAQELPQ 1688
Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
+LR L+L + + GA+ L QAL P L ++L + L A + ++ + L
Sbjct: 1689 HLRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAENNL----AGGVLRFCMELPLLRQ 1744
Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
++L +I Q L + + L+ I +S N G+E E+ +++ G + LE
Sbjct: 1745 IDLVSCKIDNQTAKLLTSSFTSCPALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDLE 1804
Query: 470 DDE 472
++
Sbjct: 1805 KNQ 1807
Score = 111 (44.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 35/137 (25%), Positives = 60/137 (43%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
L + +L ++ L+ + + +N I VG LS+A +L L+L+ N I
Sbjct: 1562 LNSSTLALLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDA 1621
Query: 365 GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLD 424
G L L LP L ++L + SAG +A+ L LE++ L CN + L
Sbjct: 1622 GVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALG 1681
Query: 425 LVKAMKNKTKLKQINVS 441
L + + ++ + S
Sbjct: 1682 LAQELPQHLRVLHLPFS 1698
Score = 109 (43.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+L ++ L+ + + +N I VG LS+A L L+L+ N I G L
Sbjct: 1569 LLTHRLSQMTCLQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLAT 1628
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L LP L ++L + SAG +A+ L LE++ L CN + L L + +
Sbjct: 1629 ILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGDPTALGLAQELPQ 1688
Query: 121 KTKLKQINVS 130
++ + S
Sbjct: 1689 HLRVLHLPFS 1698
Score = 104 (41.7 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 35/136 (25%), Positives = 62/136 (45%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
LE +++ N G AL A E L+ L+L+ + L LS++ L L
Sbjct: 1524 LEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQMTCLQSL 1583
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
L + G +++ L T+LE+++L+ N+I G L + +L++I++S
Sbjct: 1584 RLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDLSG 1643
Query: 132 NQFGEEG-VEEMEKLM 146
N G V+ E L+
Sbjct: 1644 NSISSAGGVQLAESLV 1659
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 40 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
L+ L LN N+I G L +AL SL L+L + AG +A L L +
Sbjct: 1580 LQSLRLNRNSIGDVGCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKI 1639
Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
+L+ N IS GG+ L +++ +L+++ + N G+
Sbjct: 1640 DLSGNSISSAGGVQLAESLVLCRRLEELMLGCNALGD 1676
Score = 89 (36.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 55/237 (23%), Positives = 90/237 (37%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLL------RSSCCFAXXXXXXXXX--XXXITGC 272
L+ L ELDLS N G GV+ LA +L R + C
Sbjct: 1602 LRAATSLEELDLSHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLC 1661
Query: 273 KLLSKALHDCYESSKKEGSPLA------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
+ L + + C LA L+V + L GA LA LE +
Sbjct: 1662 RRLEELMLGCNALGDPTALGLAQELPQHLRVLHLPFSHLGPGGALSLAQALDGSPHLEEI 1721
Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
+ +N + G+ E LR ++L I + A L + + P+L ++ L
Sbjct: 1722 SLAENNLAG-GVLRFC---MELPLLRQIDLVSCKIDNQTAKLLTSSFTSCPALEVILLSW 1777
Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
LL A+ +A+ L L+ V+L N+I+ G L + + + ++ I + N
Sbjct: 1778 NLLGDEAAAELAQVLPQMGRLKRVDLEKNQITALGAWLLAEGLAQGSSIQVIRLWNN 1834
Score = 85 (35.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC-LLKSAGASSIA--KYLT 91
EEN + L L + ++ +GQ + L L+L L + ASS+ L
Sbjct: 1432 EENPEAVALRLAHCDLGAHHSLLVGQLMETCARLQQLSLSQVNLCEDDDASSLLLQSLLL 1491
Query: 92 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
+ L+ LT + +S +G L + + L+++++S NQF EEG + + + ++ M
Sbjct: 1492 SLSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALEGKWM 1551
Query: 152 AAALVL 157
L L
Sbjct: 1552 LKRLDL 1557
Score = 80 (33.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
AL+V + N L +E A LA V ++ L+RV++ +N I +G L++ + +++
Sbjct: 1769 ALEVILLSWNLLGDEAAAELAQVLPQMGRLKRVDLEKNQITALGAWLLAEGLAQGSSIQV 1828
Query: 354 LNLNDNTI 361
+ L +N I
Sbjct: 1829 IRLWNNPI 1836
Score = 62 (26.9 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
L L C L+ A ++ L + LE+V+L+ N++ +G + +A +++++S
Sbjct: 847 LRLQKCQLQVHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLMAEAASQLHIARKLDLS 906
Query: 131 ENQFGEEGV 139
N GV
Sbjct: 907 NNGLSVAGV 915
Score = 47 (21.6 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 18/73 (24%), Positives = 36/73 (49%)
Query: 4 AVFKKLKTLEHVEM---PQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
A+ + L T+ ++M + I GI+ L A +L+ ++ DN ++ + + + +
Sbjct: 705 ALSRSLPTMGRLQMLGLAGSKITARGISHLVKALPLCPQLKEVSFRDNQLSDQVVLNIVE 764
Query: 61 ALSKLPSLAILNL 73
L LP L L+L
Sbjct: 765 VLPHLPRLRKLDL 777
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 227 LVELDLSDNAFGPIGVEGLADLL 249
L ++DLS N G G+ L + L
Sbjct: 1245 LSQVDLSANLLGDSGLRCLLECL 1267
>UNIPROTKB|Q96P20 [details] [associations]
symbol:NLRP3 "NACHT, LRR and PYD domains-containing protein
3" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0032621 "interleukin-18 production" evidence=IEA] [GO:0050701
"interleukin-1 secretion" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0006917 "induction of apoptosis" evidence=NAS]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IDA] [GO:0072559 "NLRP3 inflammasome complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0051259
"protein oligomerization" evidence=TAS] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0006952 "defense response" evidence=TAS] [GO:0009595 "detection
of biotic stimulus" evidence=TAS] [GO:0042834 "peptidoglycan
binding" evidence=TAS] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0050718 "positive regulation of interleukin-1
beta secretion" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0035872 "nucleotide-binding domain, leucine rich repeat
containing receptor signaling pathway" evidence=TAS] [GO:0045087
"innate immune response" evidence=TAS] [GO:0002674 "negative
regulation of acute inflammatory response" evidence=IMP]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IMP] [GO:0050713 "negative regulation of interleukin-1
beta secretion" evidence=IMP] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IMP] GO:GO:0051259 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0006917 GO:GO:0050728
GO:GO:0006954 GO:GO:0045087 GO:GO:0035872 GO:GO:0051607
GO:GO:0006919 GO:GO:0043280 GO:GO:0051092 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
EMBL:CH471148 GO:GO:0042834 GO:GO:0072559 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0042347 eggNOG:NOG82860 HOVERGEN:HBG063656
CTD:114548 KO:K12800 OrthoDB:EOG4HX508 GO:GO:0050701 GO:GO:0032621
InterPro:IPR003590 SMART:SM00368 EMBL:AF410477 EMBL:AF427617
EMBL:AY051117 EMBL:AY051112 EMBL:AY051113 EMBL:AY051114
EMBL:AY051115 EMBL:AY051116 EMBL:AY056059 EMBL:AY056060
EMBL:AF468522 EMBL:AF420469 EMBL:AY092033 EMBL:AF418985
EMBL:AY422168 EMBL:AB208891 EMBL:AL606804 EMBL:AC104335
EMBL:BC117211 EMBL:BC143362 EMBL:BC143363 EMBL:AF054176
IPI:IPI00374129 IPI:IPI00451585 IPI:IPI00553033 IPI:IPI00556137
IPI:IPI00742837 RefSeq:NP_001073289.1 RefSeq:NP_001120933.1
RefSeq:NP_001120934.1 RefSeq:NP_001230062.1 RefSeq:NP_004886.3
RefSeq:NP_899632.1 UniGene:Hs.159483 PDB:3QF2 PDBsum:3QF2
ProteinModelPortal:Q96P20 SMR:Q96P20 DIP:DIP-41153N IntAct:Q96P20
STRING:Q96P20 PhosphoSite:Q96P20 DMDM:262527566 PRIDE:Q96P20
Ensembl:ENST00000336119 Ensembl:ENST00000348069
Ensembl:ENST00000366496 Ensembl:ENST00000366497
Ensembl:ENST00000391827 Ensembl:ENST00000391828 GeneID:114548
KEGG:hsa:114548 UCSC:uc001icr.3 UCSC:uc001ics.3 UCSC:uc001icv.3
UCSC:uc001icw.3 GeneCards:GC01P247579 HGNC:HGNC:16400 HPA:CAB009190
HPA:HPA012878 HPA:HPA017374 MIM:120100 MIM:191900 MIM:606416
MIM:607115 neXtProt:NX_Q96P20 Orphanet:1451 Orphanet:47045
Orphanet:575 PharmGKB:PA26512 InParanoid:Q96P20 OMA:IKMELLF
PhylomeDB:Q96P20 ChEMBL:CHEMBL1741208 GenomeRNAi:114548
NextBio:79079 ArrayExpress:Q96P20 Bgee:Q96P20 Genevestigator:Q96P20
GermOnline:ENSG00000162711 GO:GO:0009595 Uniprot:Q96P20
Length = 1036
Score = 184 (69.8 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 67/241 (27%), Positives = 109/241 (45%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + +LVELDLSDNA G G+ L L+ C + C L S
Sbjct: 794 LSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLC--------NLKKLWLVSCCLTSACCQ 845
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
D +S S ++++ G N L + G +L K + L+++ + +G+ V +
Sbjct: 846 DL--ASVLSTSHSLTRLYV-GENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLTSVCCS 902
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIA 398
ALS N+NL HL L NT+ KG L + L L +L L +C L S ++
Sbjct: 903 ALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLHPDCKLQVLELDNCNLTSHCCWDLS 962
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKLM 457
LT + +L ++L N++ G + + +K ++ L Q + +SE F E +E L
Sbjct: 963 TLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQ 1022
Query: 458 K 458
+
Sbjct: 1023 E 1023
>UNIPROTKB|E1B7V7 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0050830 "defense
response to Gram-positive bacterium" evidence=IEA] [GO:0050700
"CARD domain binding" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0043123 GO:GO:0070374 GO:GO:0046330 GO:GO:0016323
GO:GO:0032755 GO:GO:0006919 GO:GO:0051092 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0002606 CTD:10392 KO:K08727 OMA:NDYGVRE
GO:GO:0042228 GeneTree:ENSGT00660000095240 EMBL:DAAA02010901
IPI:IPI00924206 RefSeq:NP_001243492.1 UniGene:Bt.106142
UniGene:Bt.42716 UniGene:Bt.89027 ProteinModelPortal:E1B7V7
PRIDE:E1B7V7 Ensembl:ENSBTAT00000061183 GeneID:781426
KEGG:bta:781426 NextBio:20924824 Uniprot:E1B7V7
Length = 954
Score = 163 (62.4 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 42/156 (26%), Positives = 77/156 (49%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + G K+L K K L + + N I VG ++ +E K L HL L N IT
Sbjct: 739 NQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKIT 798
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+G L A+ S+ + + + GA + A+ L ++ +L +++L N IS +GG
Sbjct: 799 SEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGG 858
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L A++ L+ +++N+ +E E +++K
Sbjct: 859 KSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLK 894
Score = 157 (60.3 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 48/154 (31%), Positives = 77/154 (50%)
Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
G+N++ +EG K LA K K++ V M N I G A ++A + +L +L+L N
Sbjct: 793 GKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNG 852
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
I+ +G L AL + SL I L L A S A+ L N TL+ + L N+I+ +
Sbjct: 853 ISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAK 912
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
G L +A++ T + +I ++ N E + E
Sbjct: 913 GIAQLAEALQKNTGIMEICLNGNLIKPEEAKVFE 946
Score = 148 (57.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 43/161 (26%), Positives = 82/161 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + GA+ +A + + K L +++ +N I G +L+ A + +K++ + + N I
Sbjct: 767 NQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIG 826
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+GA +AL PSL L+L + + G S+A L N +L LT NE+ +
Sbjct: 827 DEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVA 886
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 462
+ +K LK + + +NQ +G+ ++ E L K+ G+
Sbjct: 887 ESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGI 927
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/140 (27%), Positives = 69/140 (49%)
Query: 8 KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
K K L + + N I VG ++ +E K L HL L N IT +G L A+ S
Sbjct: 755 KYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKS 814
Query: 68 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
+ + + + GA + A+ L ++ +L +++L N IS +GG L A++ L+
Sbjct: 815 IFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIF 874
Query: 128 NVSENQFGEEGVEEMEKLMK 147
+++N+ +E E +++K
Sbjct: 875 WLTKNELDDEVAESFAEMLK 894
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/151 (27%), Positives = 75/151 (49%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A + + K L H+++ +N I G +L+ A + +K + + + N I +GA +A
Sbjct: 777 IARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEA 836
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L PSL L+L + + G S+A L N +L LT NE+ + + +K
Sbjct: 837 LRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVN 896
Query: 122 TKLKQINVSENQFGEEGVEEM-EKLMKSFGM 151
LK + + +NQ +G+ ++ E L K+ G+
Sbjct: 897 QTLKHLWLIQNQITAKGIAQLAEALQKNTGI 927
Score = 136 (52.9 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L+ V L+ +++ N + G+ L F +L + L+ N IT G L +
Sbjct: 696 LSFVLHHLRKRLALDLDNNNLNDFGVRELQPCFS---RLTVIRLSVNQITDSGVKVLYEE 752
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L+K L L L + + GA IA+ L + L + L N+I+ +GG L A+KN
Sbjct: 753 LTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNS 812
Query: 122 TKLKQINVSENQFGEEGVEEMEKLMKS 148
+ ++ + NQ G+EG + + +++
Sbjct: 813 KSIFEVGMWGNQIGDEGAKAFAEALRN 839
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/182 (24%), Positives = 81/182 (44%)
Query: 283 YESSKKEGSPLALKVFIAGRNRLE-----NEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
YE+ ++ LA + A +L + L+ V L+ +++ N + G
Sbjct: 661 YETQSEKVGQLAARGICANYLKLTFCNACSADCSALSFVLHHLRKRLALDLDNNNLNDFG 720
Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
+ L F L + L+ N IT G L + L+K L L L + + GA I
Sbjct: 721 VRELQPCFSR---LTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYI 777
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
A+ L + L + L N+I+ +GG L A+KN + ++ + NQ G+EG + + +
Sbjct: 778 ARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEAL 837
Query: 458 KS 459
++
Sbjct: 838 RN 839
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N L + G + L F +L T+ R+ + N I G+ L + + K L L L +N IT
Sbjct: 714 NNLNDFGVRELQPCFSRL-TVIRLSV--NQITDSGVKVLYEELTKYKILTFLGLYNNQIT 770
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
GA + + L + L L LG + S G S+A + ++ ++ +V + N+I +G
Sbjct: 771 DVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGA 830
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEG 449
+A++N L ++++ N EG
Sbjct: 831 KAFAEALRNHPSLTNLSLAFNGISTEG 857
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA K K++ V M N I G A ++A + L +L+L N I+ +G L A
Sbjct: 805 LALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWA 864
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + SL I L L A S A+ L N TL+ + L N+I+ +G L +A++
Sbjct: 865 LQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKN 924
Query: 122 TKLKQINVSENQFGEEGVEEME 143
T + +I ++ N E + E
Sbjct: 925 TGIMEICLNGNLIKPEEAKVFE 946
Score = 117 (46.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+ + N I G+ L + + K L L L +N IT GA + + L + L L LG
Sbjct: 734 IRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLG 793
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ S G S+A + ++ ++ +V + N+I +G +A++N L ++++ N
Sbjct: 794 KNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGI 853
Query: 135 GEEG 138
EG
Sbjct: 854 STEG 857
Score = 96 (38.9 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
+L++F +N L++E A+ A + K +TL+ + + QN I GI L++A ++N +
Sbjct: 870 SLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIME 929
Query: 354 LNLNDNTI 361
+ LN N I
Sbjct: 930 ICLNGNLI 937
Score = 64 (27.6 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 25/121 (20%), Positives = 52/121 (42%)
Query: 28 TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
+ALS +K L+L++N + G L S+L ++ L + +G +
Sbjct: 694 SALSFVLHHLRKRLALDLDNNNLNDFGVRELQPCFSRL---TVIRLSVNQITDSGVKVLY 750
Query: 88 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
+ LT L + L N+I+ G + + + L + + +N+ EG + + +K
Sbjct: 751 EELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVK 810
Query: 148 S 148
+
Sbjct: 811 N 811
Score = 40 (19.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 23/91 (25%), Positives = 41/91 (45%)
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+GQ ++ L L C SA S+++ L ++L N ++ G +L
Sbjct: 668 VGQLAARGICANYLKLTFCNACSADCSALSFVLHHLRKRLALDLDNNNLNDFGVRELQPC 727
Query: 118 MKNKTKLKQINVSENQFGEEGVEEM-EKLMK 147
++L I +S NQ + GV+ + E+L K
Sbjct: 728 F---SRLTVIRLSVNQITDSGVKVLYEELTK 755
>MGI|MGI:2653833 [details] [associations]
symbol:Nlrp3 "NLR family, pyrin domain containing 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0002674 "negative regulation of acute
inflammatory response" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=ISO]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0032621 "interleukin-18 production"
evidence=IMP] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0050701 "interleukin-1 secretion" evidence=IMP]
[GO:0050713 "negative regulation of interleukin-1 beta secretion"
evidence=ISO] [GO:0050718 "positive regulation of interleukin-1
beta secretion" evidence=ISO] [GO:0050728 "negative regulation of
inflammatory response" evidence=ISO] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0051607 "defense response to virus" evidence=IMP]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
[GO:0072559 "NLRP3 inflammasome complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2653833 GO:GO:0005829
GO:GO:0005524 GO:GO:0050728 GO:GO:0006954 GO:GO:0051607
GO:GO:0006919 Reactome:REACT_107772 GO:GO:0032088 GO:GO:0050718
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 GO:GO:0072559
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347 EMBL:AL592522
eggNOG:NOG82860 GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 CTD:114548 KO:K12800 OrthoDB:EOG4HX508
GO:GO:0050701 GO:GO:0032621 InterPro:IPR003590 SMART:SM00368
EMBL:AF486632 EMBL:AY495376 EMBL:AY495377 EMBL:AY337285
EMBL:AY337292 EMBL:AY337286 EMBL:AY337287 EMBL:AY337288
EMBL:AY337289 EMBL:AY337290 EMBL:AY337291 EMBL:AY337299
EMBL:AY337293 EMBL:AY337294 EMBL:AY337295 EMBL:AY337296
EMBL:AY337297 EMBL:AY337298 EMBL:AY337306 EMBL:AY337300
EMBL:AY337301 EMBL:AY337302 EMBL:AY337303 EMBL:AY337304
EMBL:AY337305 EMBL:AY355340 EMBL:BC116174 EMBL:BC116175
IPI:IPI00153873 IPI:IPI00620168 IPI:IPI00620897 IPI:IPI00621784
RefSeq:NP_665826.1 UniGene:Mm.54174 ProteinModelPortal:Q8R4B8
SMR:Q8R4B8 STRING:Q8R4B8 PhosphoSite:Q8R4B8 PRIDE:Q8R4B8
Ensembl:ENSMUST00000079476 Ensembl:ENSMUST00000101148 GeneID:216799
KEGG:mmu:216799 UCSC:uc007jeh.1 InParanoid:Q8R4B8 OMA:VNCCLTS
NextBio:375328 Bgee:Q8R4B8 CleanEx:MM_NLRP3 Genevestigator:Q8R4B8
GermOnline:ENSMUSG00000032691 Uniprot:Q8R4B8
Length = 1033
Score = 163 (62.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 62/241 (25%), Positives = 104/241 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + +LVELDLSDNA G G+ L L+ C + C L S
Sbjct: 791 LSSSQKLVELDLSDNALGDFGIRLLCVGLKHLLC--------NLQKLWLVSCCLTSAC-- 840
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
C + + S +L G N L + G ++L K + L+++ + +G+ + +
Sbjct: 841 -CQDLALVLSSNHSLTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSICCS 899
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIA 398
AL+ + N+N HL L N + G L + L L +L L +C L S +++
Sbjct: 900 ALTSVLKTNQNFTHLYLRSNALGDTGLRLLCEGLLHPDCKLQMLELDNCSLTSHSCWNLS 959
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKLM 457
LT N +L +NL N++ + L + +K + L Q + + E E +E L
Sbjct: 960 TILTHNHSLRKLNLGNNDLGDLCVVTLCEVLKQQGCLLQSLQLGEMYLNRETKRALEALQ 1019
Query: 458 K 458
+
Sbjct: 1020 E 1020
Score = 67 (28.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIA 87
L + N+ L L+L+DNT+ G L +AL P I L LG C L I+
Sbjct: 730 LFSSLSTNRSLTELDLSDNTLGDPGMRVLCEALQH-PGCNIQRLWLGRCGLSHQCCFDIS 788
Query: 88 KYLTDNTTLEDVNLTCNEI 106
L+ + L +++L+ N +
Sbjct: 789 SVLSSSQKLVELDLSDNAL 807
Score = 52 (23.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 53 KGAIPLGQALSKLPSLAIL---NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 109
+G PL Q P + L +C L S+ + L+ N +L +++L+ N +
Sbjct: 694 RGGRPLDQVQCVFPDTHVACSSRLVNCCLTSSFCRGLFSSLSTNRSLTELDLSDNTLGDP 753
Query: 110 GGLDLVKAMKN 120
G L +A+++
Sbjct: 754 GMRVLCEALQH 764
Score = 39 (18.8 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 114 LVKAMKNKTKLKQINVSENQFGEEGV 139
L ++ L ++++S+N G+ G+
Sbjct: 730 LFSSLSTNRSLTELDLSDNTLGDPGM 755
>UNIPROTKB|E1BDZ4 [details] [associations]
symbol:LOC782386 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524 GO:GO:0007283
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 OMA:TFPDGCQ GeneTree:ENSGT00700000104427
EMBL:DAAA02040807 IPI:IPI00690027 Ensembl:ENSBTAT00000002954
Uniprot:E1BDZ4
Length = 1095
Score = 136 (52.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 59/242 (24%), Positives = 104/242 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + RL L L+DN G GV+ +++ L+ C ++ L + LH
Sbjct: 842 LISNKRLTHLCLADNMLGDGGVKFMSEALKHPQCILQSLVLRRCHFTSLSSESLSASLLH 901
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
+ K L L G N L+++G K+L F+ +L+ +E+ +
Sbjct: 902 N------KSLMHLDL-----GSNCLQDDGVKLLCDAFRHPSCSLQDLELMGCVLTSACCL 950
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSI 397
L+ A N NL+ L+L +N + G L +AL + P+ I LG C L S +
Sbjct: 951 DLASAILNNPNLQSLDLGNNDLRDDGVKFLFEAL-RHPNCNIQRLGLEHCGLTSLCCQDL 1009
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
+ L+ N L ++LT N + + + L + KL+ + + + EE + +E +
Sbjct: 1010 SSTLSSNQGLIKISLTLNTLQCEEIMKLKVLRSTECKLQVLGLCKEALDEEAQKLLEAVA 1069
Query: 458 KS 459
S
Sbjct: 1070 SS 1071
Score = 96 (38.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 34/140 (24%), Positives = 68/140 (48%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
+ L H+++ + I G+ +L +A + + KL+ L+L +T + + +AL + SL
Sbjct: 732 QNLIHLDLKGSDIGDDGVKSLCEALKHPDCKLQSLSLESCDLTTVCCLNISKALVRSQSL 791
Query: 69 AILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
LNL L G + + L LE ++L ++V DL + + +L +
Sbjct: 792 LSLNLSTNNLLDDGVKLLCEGLMHPKCNLEKLSLESCGLTVACCEDLSLVLISNKRLTHL 851
Query: 128 NVSENQFGEEGVEEMEKLMK 147
+++N G+ GV+ M + +K
Sbjct: 852 CLADNMLGDGGVKFMSEALK 871
Score = 77 (32.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIA 87
+S + N+ L HL+L + I G L +AL K P L L+L C L + +I+
Sbjct: 724 ISGSLTHNQNLIHLDLKGSDIGDDGVKSLCEAL-KHPDCKLQSLSLESCDLTTVCCLNIS 782
Query: 88 KYLTDNTTLEDVNLTCNEISVQGGLDLV--KAMKNKTKLKQINV 129
K L + +L +NL+ N + + G+ L+ M K L+++++
Sbjct: 783 KALVRSQSLLSLNLSTNNL-LDDGVKLLCEGLMHPKCNLEKLSL 825
Score = 56 (24.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAK 88
+S A ++ L LNL+ N + G L + L +L L+L C L A ++
Sbjct: 781 ISKALVRSQSLLSLNLSTNNLLDDGVKLLCEGLMHPKCNLEKLSLESCGLTVACCEDLSL 840
Query: 89 YLTDNTTLEDVNLTCNEISVQGGLDLV-KAMKN 120
L N L + L N + GG+ + +A+K+
Sbjct: 841 VLISNKRLTHLCLADNMLG-DGGVKFMSEALKH 872
>DICTYBASE|DDB_G0295827 [details] [associations]
symbol:DDB_G0295827 "leucine-rich repeat-containing
protein (LRR)" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450
dictyBase:DDB_G0295827 EMBL:AAFI02000012 RefSeq:XP_002649178.1
EnsemblProtists:DDB0266619 GeneID:8619365 KEGG:ddi:DDB_G0295827
OMA:KLIWSYN ProtClustDB:CLSZ2846621 Uniprot:C7FZZ3
Length = 572
Score = 148 (57.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
G +L+D NK+L+ L+L N GAI L L+ PSL+IL+L L+ + G
Sbjct: 337 GALSLADTLAINKSLKELDLGSNQFGDAGAITLASKLNSHPSLSILDLSSNLISTEGFDK 396
Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLD-LVKAMK-NKTKLKQINVSE 442
I L NTTL ++NL+ N++ + L+ L ++ NKT L +N+SE
Sbjct: 397 ILFSLESNTTLTNLNLSRNQLDLSIPLNYLTSSLAFNKT-LTSLNLSE 443
Score = 147 (56.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 40/108 (37%), Positives = 60/108 (55%)
Query: 26 GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
G +L+D NK L+ L+L N GAI L L+ PSL+IL+L L+ + G
Sbjct: 337 GALSLADTLAINKSLKELDLGSNQFGDAGAITLASKLNSHPSLSILDLSSNLISTEGFDK 396
Query: 86 IAKYLTDNTTLEDVNLTCNEISVQGGLD-LVKAMK-NKTKLKQINVSE 131
I L NTTL ++NL+ N++ + L+ L ++ NKT L +N+SE
Sbjct: 397 ILFSLESNTTLTNLNLSRNQLDLSIPLNYLTSSLAFNKT-LTSLNLSE 443
Score = 136 (52.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 47/156 (30%), Positives = 80/156 (51%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
+LK G N+ + GA LA+ +L +++ N I G + + E N L +
Sbjct: 350 SLKELDLGSNQFGDAGAITLASKLNSHPSLSILDLSSNLISTEGFDKILFSLESNTTLTN 409
Query: 354 LNLNDNTITYKGAIPLGQALSKLP---SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
LNL+ N + +IPL S L +L LNL +C L+++ I+ L N L+ +
Sbjct: 410 LNLSRNQLDL--SIPLNYLTSSLAFNKTLTSLNLSECNLQNSHFIQISIALQSNKKLKKL 467
Query: 411 NLTCNEIS-VQGGLDLVKAMKNKTKLKQINVSENQF 445
NL+ N IS ++ ++++ NKT LK I +S+++F
Sbjct: 468 NLSKNNISDIKPFFTIIQS--NKT-LKSIYLSKHKF 500
Score = 121 (47.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTITYKGAI 367
G + L +TLE++ N + + LS+ + ++ L + I GA+
Sbjct: 280 GLEYLGRALSNNQTLEKLIWSYNQSNYTSVMCLSNGLRNPHSQMKSLIMKGCDIEGWGAL 339
Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
L L+ SL L+LG AGA ++A L + +L ++L+ N IS +G ++
Sbjct: 340 SLADTLAINKSLKELDLGSNQFGDAGAITLASKLNSHPSLSILDLSSNLISTEGFDKILF 399
Query: 428 AMKNKTKLKQINVSENQ 444
++++ T L +N+S NQ
Sbjct: 400 SLESNTTLTNLNLSRNQ 416
Score = 86 (35.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 26 GITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 85
G+ LSD E N+ +R L+L + + G LG+ALS +L L
Sbjct: 253 GVVYLSDVLESNQCIRQLDLQ-SCGSVNGLEYLGRALSNNQTLEKLIWSYNQSNYTSVMC 311
Query: 86 IAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
++ L + ++ ++ + + +I G L L + LK++++ NQFG+ G +
Sbjct: 312 LSNGLRNPHSQMKSLIMKGCDIEGWGALSLADTLAINKSLKELDLGSNQFGDAGAITLAS 371
Query: 145 LMKS 148
+ S
Sbjct: 372 KLNS 375
Score = 59 (25.8 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 25/102 (24%), Positives = 45/102 (44%)
Query: 32 DAFEENKKLRHLN----LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
D F++ K + + LNDN+ + LS LP+L+ LNL LK I
Sbjct: 172 DYFDQKKNMTYRRRKRVLNDNSDKIGKCLATIINLS-LPNLSTLNLSMTNLKERHVKVIQ 230
Query: 88 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+ N + + I QG + L +++ ++Q+++
Sbjct: 231 SSLSCNRNIRKLAFDSCPIGDQGVVYLSDVLESNQCIRQLDL 272
>UNIPROTKB|B0FPE9 [details] [associations]
symbol:NLRP3 "NACHT, LRR and PYD domains-containing protein
3" species:9544 "Macaca mulatta" [GO:0072559 "NLRP3 inflammasome
complex" evidence=ISS] GO:GO:0005524 GO:GO:0005737 GO:GO:0050728
GO:GO:0006954 GO:GO:0051607 GO:GO:0006919 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
GO:GO:0072559 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347
eggNOG:NOG82860 HOGENOM:HOG000294064 CTD:114548 KO:K12800
OrthoDB:EOG4HX508 GO:GO:0050701 GO:GO:0032621 InterPro:IPR003590
SMART:SM00368 EMBL:EU344966 RefSeq:NP_001107823.1 UniGene:Mmu.12334
ProteinModelPortal:B0FPE9 STRING:B0FPE9 GeneID:701278
KEGG:mcc:701278 NextBio:19980797 Uniprot:B0FPE9
Length = 1035
Score = 179 (68.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 66/241 (27%), Positives = 108/241 (44%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + +LVELDLSDNA G G+ L L+ C + C L S
Sbjct: 793 LSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLC--------NLKKLWLVSCCLTSACCQ 844
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
D +S S ++++ G N L + G +L K + L+++ + +G+ +
Sbjct: 845 DL--ASVLSTSRSLTRLYV-GENALGDAGVAILCEKAKNPQCNLQKLGLVNSGLTSACCS 901
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIA 398
ALS N+NL HL L NT+ KG L + L L +L L +C L S ++
Sbjct: 902 ALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLHPDCKLQVLELDNCNLTSHCCWDLS 961
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKLM 457
LT + +L ++L N++ G + + +K ++ L Q + +SE F E +E L
Sbjct: 962 TLLTSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQ 1021
Query: 458 K 458
+
Sbjct: 1022 E 1022
>UNIPROTKB|E2RI72 [details] [associations]
symbol:PPP1R37 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0019902 "phosphatase binding"
evidence=IEA] [GO:0010923 "negative regulation of phosphatase
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0010923 GeneTree:ENSGT00640000091171 CTD:284352 OMA:GMTLPHT
EMBL:AAEX03000889 EMBL:AAEX03000888 RefSeq:XP_541567.3
Ensembl:ENSCAFT00000007363 GeneID:484452 KEGG:cfa:484452
NextBio:20858590 Uniprot:E2RI72
Length = 700
Score = 128 (50.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 36/165 (21%), Positives = 81/165 (49%)
Query: 296 KVFIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRH 353
++++A N+L + + L + K +L+ +++ N + G+ + + E+ K L
Sbjct: 251 ELYLAD-NKLNGLQDSAQLGNLLKFNSSLQILDLRNNHVLDSGLAYICEGLKEQKKGLET 309
Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
L L +N +T+ G LG L SL LNLG + + G ++ L N ++ + LT
Sbjct: 310 LVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLT 369
Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+++ +G + + + + +L ++++ EN+ G+ + +K
Sbjct: 370 STKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALK 414
Score = 127 (49.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 34/147 (23%), Positives = 72/147 (48%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQ 60
L + K +L+ +++ N + G+ + + +E KK L L L +N +T+ G LG
Sbjct: 268 LGNLLKFNSSLQILDLRNNHVLDSGLAYICEGLKEQKKGLETLVLWNNQLTHTGMAFLGM 327
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L SL LNLG + + G ++ L N ++ + LT +++ +G + + + +
Sbjct: 328 TLPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLTSTKLTCEGAVAVAEFIAE 387
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
+L ++++ EN+ G+ + +K
Sbjct: 388 SPRLLRLDLRENEIKTGGLMALSLALK 414
Score = 115 (45.5 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 38/176 (21%), Positives = 77/176 (43%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
L+ + N+L + G L ++LE + + N I + G+ L + N+++ L
Sbjct: 307 LETLVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRL 366
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
L +T +GA+ + + +++ P L L+L + +K+ G +++ L N +L ++L
Sbjct: 367 GLTSTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALKVNHSLLRLDLD- 425
Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSEN-QFGEEGVEEMEKLMKSFGMAAALVLE 469
E + ++ K Q +N E E+ ++L S M V E
Sbjct: 426 REPKKEAVKSFIETQKALLAEIQNGCKQNFMLAREQEEKEQRLQLSASMPEITVTE 481
Score = 112 (44.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 40/167 (23%), Positives = 76/167 (45%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLR 352
+L++ N + + G + K+ K LE + + N + H G+ L ++L
Sbjct: 277 SLQILDLRNNHVLDSGLAYICEGLKEQKKGLETLVLWNNQLTHTGMAFLGMTLPHTQSLE 336
Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
LNL N I +G L L S+ L L L GA ++A+++ ++ L ++L
Sbjct: 337 TLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLTSTKLTCEGAVAVAEFIAESPRLLRLDL 396
Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
NEI G + L A+K L ++++ + + +E V+ + K+
Sbjct: 397 RENEIKTGGLMALSLALKVNHSLLRLDL-DREPKKEAVKSFIETQKA 442
Score = 96 (38.9 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNT-ITYKGAIPLGQ 60
L VFK+L+ V++ Q + G +AL D E + HLN++ N I +G
Sbjct: 127 LEEVFKRLQ-FRVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAH 185
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ K L L+ + L A +A+ L ++L ++L +S + + L A+K
Sbjct: 186 MMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKM 245
Query: 121 KTKLKQINVSENQF-GEEGVEEMEKLMK 147
L+++ +++N+ G + ++ L+K
Sbjct: 246 NVNLRELYLADNKLNGLQDSAQLGNLLK 273
Score = 70 (29.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 32/144 (22%), Positives = 65/144 (45%)
Query: 3 AAVFKKLKTLE---HVEMPQNGIYHVGITALSDAFEENKK---LRHLNLNDNTITYKGAI 56
+A+F ++ E H+ + N H+G A +K L++L+ + + A
Sbjct: 152 SALFDMIEYYESATHLNISFNK--HIGTRGWQAAAHMMRKTSCLQYLDARNTPLLDHSAP 209
Query: 57 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS-VQGGLDLV 115
+ +AL SLA+L+L + L +A L N L ++ L N+++ +Q L
Sbjct: 210 FVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNVNLRELYLADNKLNGLQDSAQLG 269
Query: 116 KAMKNKTKLKQINVSENQFGEEGV 139
+K + L+ +++ N + G+
Sbjct: 270 NLLKFNSSLQILDLRNNHVLDSGL 293
>UNIPROTKB|E1C3J0 [details] [associations]
symbol:LOC100859479 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR002048 InterPro:IPR011992 PROSITE:PS50222 GO:GO:0005509
Gene3D:1.10.238.10 GeneTree:ENSGT00640000091171 EMBL:AADN02003486
IPI:IPI00822711 Ensembl:ENSGALT00000037695 Uniprot:E1C3J0
Length = 497
Score = 153 (58.9 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 47/155 (30%), Positives = 78/155 (50%)
Query: 5 VFKKLKTL-EHVEMPQN---GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+F T+ H++MPQ G H T +S + N +++ L+L+ N + KG LGQ
Sbjct: 124 LFPSFCTIWHHLKMPQLQLVGRSHSSCTFVS--LQSNYQVKELDLSHNEFSEKGGQLLGQ 181
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L+ +L IL+L L+ G + L N L+ +NL+ N I +G L +A+K
Sbjct: 182 MLAVNTTLEILDLSWNHLRRKGTVAFGTGLKGNAALKILNLSWNSIGNEGAQALAEALKV 241
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
+ L +++S NQ EG +++ K +K G L
Sbjct: 242 NSVLIHLDISNNQINNEGAKKICKGLKVNGTLKVL 276
Score = 147 (56.8 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 43/142 (30%), Positives = 77/142 (54%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N +G ++L + TLE +++ N + G A + N L+ LNL+ N+I
Sbjct: 169 NEFSEKGGQLLGQMLAVNTTLEILDLSWNHLRRKGTVAFGTGLKGNAALKILNLSWNSIG 228
Query: 363 YKGAIPLGQALSKLPSLAI-LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
+GA L +AL K+ S+ I L++ + + + GA I K L N TL+ + + N ++V+G
Sbjct: 229 NEGAQALAEAL-KVNSVLIHLDISNNQINNEGAKKICKGLKVNGTLKVLKMANNLLTVEG 287
Query: 422 GLDLVKAM-KNKTK-LKQINVS 441
+LV ++ KN +++IN+S
Sbjct: 288 ATELVGSVRKNPNSVMEEINIS 309
Score = 145 (56.1 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 46/160 (28%), Positives = 79/160 (49%)
Query: 316 VFKKLKTL-ERVEMPQN---GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
+F T+ ++MPQ G H T +S + N ++ L+L+ N + KG LGQ
Sbjct: 124 LFPSFCTIWHHLKMPQLQLVGRSHSSCTFVS--LQSNYQVKELDLSHNEFSEKGGQLLGQ 181
Query: 372 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
L+ +L IL+L L+ G + L N L+ +NL+ N I +G L +A+K
Sbjct: 182 MLAVNTTLEILDLSWNHLRRKGTVAFGTGLKGNAALKILNLSWNSIGNEGAQALAEALKV 241
Query: 432 KTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDD 471
+ L +++S NQ EG +++ K +K G L + ++
Sbjct: 242 NSVLIHLDISNNQINNEGAKKICKGLKVNGTLKVLKMANN 281
Score = 135 (52.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 40/123 (32%), Positives = 70/123 (56%)
Query: 11 TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
TLE +++ N + G A + N L+ LNL+ N+I +GA L +AL K+ S+ I
Sbjct: 188 TLEILDLSWNHLRRKGTVAFGTGLKGNAALKILNLSWNSIGNEGAQALAEAL-KVNSVLI 246
Query: 71 -LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTK-LKQI 127
L++ + + + GA I K L N TL+ + + N ++V+G +LV ++ KN +++I
Sbjct: 247 HLDISNNQINNEGAKKICKGLKVNGTLKVLKMANNLLTVEGATELVGSVRKNPNSVMEEI 306
Query: 128 NVS 130
N+S
Sbjct: 307 NIS 309
Score = 126 (49.4 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 38/153 (24%), Positives = 72/153 (47%)
Query: 304 RLENEGAKMLAAVFKKLKT---LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
+L+ G + F L++ ++ +++ N G L N L L+L+ N
Sbjct: 139 QLQLVGRSHSSCTFVSLQSNYQVKELDLSHNEFSEKGGQLLGQMLAVNTTLEILDLSWNH 198
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
+ KG + G L +L ILNL + + GA ++A+ L N+ L ++++ N+I+ +
Sbjct: 199 LRRKGTVAFGTGLKGNAALKILNLSWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNE 258
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
G + K +K LK + ++ N EG E+
Sbjct: 259 GAKKICKGLKVNGTLKVLKMANNLLTVEGATEL 291
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
++ +++ N G L N L L+L+ N + KG + G L +L IL
Sbjct: 161 VKELDLSHNEFSEKGGQLLGQMLAVNTTLEILDLSWNHLRRKGTVAFGTGLKGNAALKIL 220
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
NL + + GA ++A+ L N+ L ++++ N+I+ +G + K +K LK + ++
Sbjct: 221 NLSWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNEGAKKICKGLKVNGTLKVLKMAN 280
Query: 132 NQFGEEGVEEM 142
N EG E+
Sbjct: 281 NLLTVEGATEL 291
Score = 110 (43.8 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 30/121 (24%), Positives = 60/121 (49%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
L++ N L +G K L+ + + N I + G AL++A + N L HL
Sbjct: 189 LEILDLSWNHLRRKGTVAFGTGLKGNAALKILNLSWNSIGNEGAQALAEALKVNSVLIHL 248
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL--TDNTTLEDVNL 412
++++N I +GA + + L +L +L + + LL GA+ + + N+ +E++N+
Sbjct: 249 DISNNQINNEGAKKICKGLKVNGTLKVLKMANNLLTVEGATELVGSVRKNPNSVMEEINI 308
Query: 413 T 413
+
Sbjct: 309 S 309
Score = 98 (39.6 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
ALK+ N + NEGA+ LA K L +++ N I + G + + N L+
Sbjct: 216 ALKILNLSWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNEGAKKICKGLKVNGTLKV 275
Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAI--LNL--GDCLLKSAGASSIA 398
L + +N +T +GA L ++ K P+ + +N+ G L +A +++A
Sbjct: 276 LKMANNLLTVEGATELVGSVRKNPNSVMEEINISPGTVLCCAASEATLA 324
Score = 71 (30.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 27/104 (25%), Positives = 48/104 (46%)
Query: 6 FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
F + T ++ + +G+ G+ A++ A N + HL L DN I +GA + + L +
Sbjct: 9 FAQNLTKPYINLNHHGLGPKGVKAIAIALVSNATVTHLELEDNHILAEGAKCIAEMLREN 68
Query: 66 PSLAILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEIS 107
SL L L++ +LT++ +L + T EIS
Sbjct: 69 CSLR--ELVPNLIQQKNVLPNVSWLTEDKDPSLRPQHNTKGEIS 110
Score = 55 (24.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
+NL L G +IA L N T+ + L N I +G + + ++ L+++
Sbjct: 18 INLNHHGLGPKGVKAIAIALVSNATVTHLELEDNHILAEGAKCIAEMLRENCSLREL 74
Score = 52 (23.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSC 253
L + A + L+L DN G + +A++LR +C
Sbjct: 37 LVSNATVTHLELEDNHILAEGAKCIAEMLRENC 69
Score = 39 (18.8 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 9/59 (15%), Positives = 27/59 (45%)
Query: 89 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
+ N T +NL + + +G + A+ + + + + +N EG + + ++++
Sbjct: 8 HFAQNLTKPYINLNHHGLGPKGVKAIAIALVSNATVTHLELEDNHILAEGAKCIAEMLR 66
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSS 252
++L+ + GP GV+ +A L S+
Sbjct: 18 INLNHHGLGPKGVKAIAIALVSN 40
>DICTYBASE|DDB_G0293920 [details] [associations]
symbol:DDB_G0293920 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293920 eggNOG:NOG239526 EMBL:AAFI02000224
RefSeq:XP_628873.1 ProteinModelPortal:Q54B43
EnsemblProtists:DDB0192196 GeneID:8629489 KEGG:ddi:DDB_G0293920
InParanoid:Q54B43 OMA:DYSQQDQ Uniprot:Q54B43
Length = 861
Score = 152 (58.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 56/237 (23%), Positives = 106/237 (44%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLRS-SCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+LV L+ SDN G+ LA+ +RS + F G + + L Y
Sbjct: 268 QLVSLNCSDNRVSDKGMNSLANAIRSFNRPFLEFIASNVDLQSK--GASIFFRTLQSNYS 325
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI------ 338
SS G+ + L V RN LE G++ L L T + P+ + H+ +
Sbjct: 326 SS---GAIVHLDV---SRNDLEKIGSESLHDWIILLNT--SIPSPRKPLVHINLEETQLD 377
Query: 339 -TALSDAFEENK--NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
T ++ A ++ + +L ++NL+ N T + L ++K SLA + L C + +
Sbjct: 378 TTKVTMALKQGQLESLEYINLSGNKFTPEAVANLCSIIAKCDSLAQIKLSKCSITGDQVN 437
Query: 396 SIAKYLTDNTTLED--VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
+I T + D ++L+ N + +G L + +K+ + + +N++ N F ++G+
Sbjct: 438 NILNACTSGIQVHDRTLDLSSNNLEQKGALSFAQTIKSSSNIAHLNLANNSFRKKGI 494
Score = 129 (50.5 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 57/245 (23%), Positives = 102/245 (41%)
Query: 221 LKTGA--RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKA 278
LK G L ++LS N F P V L ++ + C ITG ++ +
Sbjct: 385 LKQGQLESLEYINLSGNKFTPEAVANLCSII-AKC---DSLAQIKLSKCSITGDQV-NNI 439
Query: 279 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 338
L+ C + L L N LE +GA A K + + + N GI
Sbjct: 440 LNACTSGIQVHDRTLDLS-----SNNLEQKGALSFAQTIKSSSNIAHLNLANNSFRKKGI 494
Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP----SLAILNLGDCLLKS--A 392
T + A EEN L+ ++L+ N + A P+ +++ S+ L L + K
Sbjct: 495 TFIVQALEENSTLQSIDLSSNFKSSSKAEPIVDHIARTVHHHVSIRKLVLAGSVSKGFYL 554
Query: 393 GAS--SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
G + K L ++ L +++++ N + +L +++K T LK +++ N G G
Sbjct: 555 GKELLPLVKSLVNDCKLVELDISGNNMGDDICRELFESLKKNTCLKTLHLDNNSLGLAGF 614
Query: 451 EEMEK 455
+ M++
Sbjct: 615 QAMKR 619
Score = 121 (47.7 bits), Expect = 0.00054, P = 0.00054
Identities = 31/133 (23%), Positives = 64/133 (48%)
Query: 10 KTLEHVEMPQNGIYHVGIT-ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
K L H+ + + + +T AL E+ L ++NL+ N T + L ++K SL
Sbjct: 364 KPLVHINLEETQLDTTKVTMALKQGQLES--LEYINLSGNKFTPEAVANLCSIIAKCDSL 421
Query: 69 AILNLGDCLLKSAGASSIAKYLTDNTTLED--VNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
A + L C + ++I T + D ++L+ N + +G L + +K+ + +
Sbjct: 422 AQIKLSKCSITGDQVNNILNACTSGIQVHDRTLDLSSNNLEQKGALSFAQTIKSSSNIAH 481
Query: 127 INVSENQFGEEGV 139
+N++ N F ++G+
Sbjct: 482 LNLANNSFRKKGI 494
Score = 112 (44.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 37/144 (25%), Positives = 69/144 (47%)
Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
+++ N + G + + + + N+ HLNL +N+ KG + QAL + +L ++L
Sbjct: 454 LDLSSNNLEQKGALSFAQTIKSSSNIAHLNLANNSFRKKGITFIVQALEENSTLQSIDLS 513
Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI--SVQGG-------LDLVKAMKNKTKLK 436
S+ A I ++ T V++ + SV G L LVK++ N KL
Sbjct: 514 SNFKSSSKAEPIVDHIA-RTVHHHVSIRKLVLAGSVSKGFYLGKELLPLVKSLVNDCKLV 572
Query: 437 QINVSENQFGEEGVEEM-EKLMKS 459
++++S N G++ E+ E L K+
Sbjct: 573 ELDISGNNMGDDICRELFESLKKN 596
Score = 83 (34.3 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHV-GITALSDAFEENK--KLRHLNLNDNTITYKGAIP 57
+LA VF +TL V++ +GI G L DA +EN+ +L LN +DN ++ KG
Sbjct: 229 LLADVFHHNRTLVRVDL--SGIESDDGWVQLGDALKENQTNQLVSLNCSDNRVSDKGMNS 286
Query: 58 LGQALSKL--PSLAILNLGDCLLKSAGASSIAKYLTDN 93
L A+ P L + + L+S GAS + L N
Sbjct: 287 LANAIRSFNRPFLEFI-ASNVDLQSKGASIFFRTLQSN 323
Score = 72 (30.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 30 LSDAFEE--NKKLRHLNLNDNT---ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
L D EE +K R NL+D +GA+ L L+ L + C K+
Sbjct: 167 LIDYLEETVSKGSRVFNLDDFAGIDRNSEGAVNLTPVLAALRHNTFFDTFVCHNKTRKEI 226
Query: 85 SI--AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKT-KLKQINVSENQFGEEGVE 140
+ A N TL V+L+ E S G + L A+K N+T +L +N S+N+ ++G+
Sbjct: 227 PLLLADVFHHNRTLVRVDLSGIE-SDDGWVQLGDALKENQTNQLVSLNCSDNRVSDKGMN 285
Query: 141 EMEKLMKSF 149
+ ++SF
Sbjct: 286 SLANAIRSF 294
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/155 (23%), Positives = 67/155 (43%)
Query: 2 LAAVFKKLKTLEHVEM--PQNGIYHVGITALSDAFEE-NKKLRHLNLNDNTITYKGAIPL 58
L K+ +T + V + N + G+ +L++A N+ ++ + KGA
Sbjct: 257 LGDALKENQTNQLVSLNCSDNRVSDKGMNSLANAIRSFNRPFLEFIASNVDLQSKGASIF 316
Query: 59 GQALSK--LPSLAILNLGDCL--LKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGG-L 112
+ L S AI++L L+ G+ S+ ++ NT++ I+++ L
Sbjct: 317 FRTLQSNYSSSGAIVHLDVSRNDLEKIGSESLHDWIILLNTSIPSPRKPLVHINLEETQL 376
Query: 113 DLVK---AMKNKT--KLKQINVSENQFGEEGVEEM 142
D K A+K L+ IN+S N+F E V +
Sbjct: 377 DTTKVTMALKQGQLESLEYINLSGNKFTPEAVANL 411
>UNIPROTKB|E2R9L3 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050830
"defense response to Gram-positive bacterium" evidence=IEA]
[GO:0050700 "CARD domain binding" evidence=IEA] [GO:0046330
"positive regulation of JNK cascade" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042228 "interleukin-8 biosynthetic process"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032755 "positive regulation
of interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 SMART:SM00114
GO:GO:0005737 GO:GO:0016045 GO:GO:0006917 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0016323 GO:GO:0032755 GO:GO:0006919 GO:GO:0051092
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606 OMA:NDYGVRE
GO:GO:0042228 GeneTree:ENSGT00660000095240 EMBL:AAEX03009404
Ensembl:ENSCAFT00000004933 NextBio:20856994 Uniprot:E2R9L3
Length = 964
Score = 175 (66.7 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 43/156 (27%), Positives = 81/156 (51%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + G K+L K K L + + N I VG ++ +E K L HL L +N IT
Sbjct: 749 NQITDSGVKVLYEELTKYKILTFLGLYSNQITDVGARYVARILDECKGLTHLKLGENKIT 808
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+G L A+ S+ + + + GA + A+ L ++ +L +++L N IS +GG
Sbjct: 809 SEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGG 868
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L +A++ T L+ +++N+ +E E + +++K
Sbjct: 869 KSLAQALQRNTSLRIFWLTKNELDDEVAESLAEMLK 904
Score = 156 (60.0 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 39/140 (27%), Positives = 73/140 (52%)
Query: 8 KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
K K L + + N I VG ++ +E K L HL L +N IT +G L A+ S
Sbjct: 765 KYKILTFLGLYSNQITDVGARYVARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSS 824
Query: 68 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
+ + + + GA + A+ L ++ +L +++L N IS +GG L +A++ T L+
Sbjct: 825 ILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSLRIF 884
Query: 128 NVSENQFGEEGVEEMEKLMK 147
+++N+ +E E + +++K
Sbjct: 885 WLTKNELDDEVAESLAEMLK 904
Score = 155 (59.6 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
G N++ +EG K LA + ++ + M N I G A ++A + +L +L+L N
Sbjct: 803 GENKITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNG 862
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
I+ +G L QAL + SL I L L A S+A+ L N TL+ + L N+I+ +
Sbjct: 863 ISTEGGKSLAQALQRNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAK 922
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFG-EEG-VEEMEKLMKSF 460
G L A++ T + +I ++ N EE V E EK + F
Sbjct: 923 GIAQLADALQKNTGITEICLNGNLIKPEEAKVFEDEKRIVCF 964
Score = 151 (58.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 43/161 (26%), Positives = 82/161 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + GA+ +A + + K L +++ +N I G L+ A + ++ + + N I
Sbjct: 777 NQITDVGARYVARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIG 836
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+GA +AL PSL L+L + + G S+A+ L NT+L LT NE+ +
Sbjct: 837 DEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSLRIFWLTKNELDDEVA 896
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 462
L + +K LK + + +NQ +G+ ++ + L K+ G+
Sbjct: 897 ESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQKNTGI 937
Score = 140 (54.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 41/151 (27%), Positives = 75/151 (49%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A + + K L H+++ +N I G L+ A + + + + N I +GA +A
Sbjct: 787 VARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEA 846
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L PSL L+L + + G S+A+ L NT+L LT NE+ + L + +K
Sbjct: 847 LRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSLRIFWLTKNELDDEVAESLAEMLKVN 906
Query: 122 TKLKQINVSENQFGEEGVEEM-EKLMKSFGM 151
LK + + +NQ +G+ ++ + L K+ G+
Sbjct: 907 QTLKHLWLIQNQITAKGIAQLADALQKNTGI 937
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 44/182 (24%), Positives = 80/182 (43%)
Query: 283 YESSKKEGSPLALKVFIAGRNRLE-----NEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
YE+ ++ LA K A +L + L+ V + +++ N + G
Sbjct: 671 YETQSEKVGRLAAKGICANYLKLTYCNACSADCSALSFVLHHFRKRLALDLDNNNLNDYG 730
Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
+ L F L L L+ N IT G L + L+K L L L + GA +
Sbjct: 731 VRELQPCFSR---LTVLRLSVNQITDSGVKVLYEELTKYKILTFLGLYSNQITDVGARYV 787
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
A+ L + L + L N+I+ +GG L A++N + + +I + N+ G+EG + + +
Sbjct: 788 ARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEAL 847
Query: 458 KS 459
++
Sbjct: 848 RN 849
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+++ N + G+ L F +L L L+ N IT G L + L+K L L L
Sbjct: 719 LDLDNNNLNDYGVRELQPCFS---RLTVLRLSVNQITDSGVKVLYEELTKYKILTFLGLY 775
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ GA +A+ L + L + L N+I+ +GG L A++N + + +I + N+
Sbjct: 776 SNQITDVGARYVARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRI 835
Query: 135 GEEGVEEMEKLMKS 148
G+EG + + +++
Sbjct: 836 GDEGAKAFAEALRN 849
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 46/150 (30%), Positives = 72/150 (48%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA + ++ + M N I G A ++A + L +L+L N I+ +G L QA
Sbjct: 815 LALAVRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQA 874
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + SL I L L A S+A+ L N TL+ + L N+I+ +G L A++
Sbjct: 875 LQRNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQKN 934
Query: 122 TKLKQINVSENQFG-EEG-VEEMEKLMKSF 149
T + +I ++ N EE V E EK + F
Sbjct: 935 TGITEICLNGNLIKPEEAKVFEDEKRIVCF 964
Score = 109 (43.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
++ + ++E+ + N G G + A+ LR+ G K L++AL
Sbjct: 819 VRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTE--GGKSLAQAL- 875
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
++ S L++F +N L++E A+ LA + K +TL+ + + QN I GI
Sbjct: 876 ------QRNTS---LRIFWLTKNELDDEVAESLAEMLKVNQTLKHLWLIQNQITAKGIAQ 926
Query: 341 LSDAFEENKNLRHLNLNDNTI 361
L+DA ++N + + LN N I
Sbjct: 927 LADALQKNTGITEICLNGNLI 947
Score = 69 (29.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 26/111 (23%), Positives = 47/111 (42%)
Query: 28 TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 87
+ALS +K L+L++N + G L S+L +L L + +G +
Sbjct: 704 SALSFVLHHFRKRLALDLDNNNLNDYGVRELQPCFSRL---TVLRLSVNQITDSGVKVLY 760
Query: 88 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
+ LT L + L N+I+ G + + + L + + EN+ EG
Sbjct: 761 EELTKYKILTFLGLYSNQITDVGARYVARILDECKGLTHLKLGENKITSEG 811
>UNIPROTKB|F1PK29 [details] [associations]
symbol:RNH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045765 "regulation of angiogenesis"
evidence=IEA] [GO:0032311 "angiogenin-PRI complex" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 InterPro:IPR003590 SMART:SM00368
OMA:MEDRLQA GeneTree:ENSGT00670000097902 EMBL:AAEX03011320
EMBL:AAEX03011321 EMBL:AAEX03011322 EMBL:AAEX03011323
Ensembl:ENSCAFT00000038320 Uniprot:F1PK29
Length = 456
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPL 369
K +++ + +L + + N + G+ + + ++ L+L + +T G L
Sbjct: 41 KDISSALQANPSLTELSLCTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCCLTKTGCGVL 100
Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLT-CNEISVQGGLDLVK 427
L +P+L L+L D L+ AG + + L D LE + L CN ++ L
Sbjct: 101 PAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQCHLEKLQLEYCN-LTAASCESLAS 159
Query: 428 AMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGMAAALVLED 470
A++NK K++ VS N+ GE GV + + L++S L LE+
Sbjct: 160 ALRNKQHFKELAVSNNEIGEAGVRVLCQGLVESACQLETLKLEN 203
Score = 119 (46.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 36/113 (31%), Positives = 59/113 (52%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLE 97
K++ L+L + +T G L L +P+L L+L D L+ AG + + L D LE
Sbjct: 81 KIQKLSLQNCCLTKTGCGVLPAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQCHLE 140
Query: 98 DVNLT-CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKS 148
+ L CN ++ L A++NK K++ VS N+ GE GV + + L++S
Sbjct: 141 KLQLEYCN-LTAASCESLASALRNKQHFKELAVSNNEIGEAGVRVLCQGLVES 192
Score = 111 (44.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 51/229 (22%), Positives = 97/229 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L++ L EL LSDN G++ L + L C + C+ L+ AL
Sbjct: 104 LRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQCHLEKLQLEYCNLTAAS-CESLASALR 162
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGIT 339
+ K+ LA+ N + G ++L + + LE +++ G+
Sbjct: 163 N-----KQHFKELAVS-----NNEIGEAGVRVLCQGLVESACQLETLKLENCGLTPASCE 212
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSI 397
L +LR L+L DN + +G L +L PS + +L L +C + + G +
Sbjct: 213 DLRAVVASKTSLRELDLGDNKLGDQGIAVLCPSLLH-PSCQIRVLWLWECDVTATGCRDL 271
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQF 445
++ +LE+++L CN + +G L +++ ++L+ + V F
Sbjct: 272 CHVVSTKESLEELSLACNALGDEGAQLLCESLLEPGSRLQSLWVKSCNF 320
Score = 101 (40.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/148 (21%), Positives = 66/148 (44%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITY 363
L G +L AV + + TL + + N + G+ L + + + +L L L +T
Sbjct: 92 LTKTGCGVLPAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQCHLEKLQLEYCNLTA 151
Query: 364 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGG 422
L AL L + + + AG + + L ++ LE + L ++
Sbjct: 152 ASCESLASALRNKQHFKELAVSNNEIGEAGVRVLCQGLVESACQLETLKLENCGLTPASC 211
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGV 450
DL + +KT L+++++ +N+ G++G+
Sbjct: 212 EDLRAVVASKTSLRELDLGDNKLGDQGI 239
Score = 99 (39.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 57/238 (23%), Positives = 101/238 (42%)
Query: 222 KTGARLVELDLSDNAFGPIGVEGLA-DLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
KT R ELDL DN G G+ L LL SC TGC+ L
Sbjct: 221 KTSLR--ELDLGDNKLGDQGIAVLCPSLLHPSCQIRVLWLWECDVTA--TGCRDL----- 271
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGIT 339
C+ S KE +L+ N L +EGA++L ++ + L+ + +
Sbjct: 272 -CHVVSTKE----SLEELSLACNALGDEGAQLLCESLLEPGSRLQSLWVKSCNFTAACCH 326
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS----LAILNLGDCLLKSAGAS 395
L ++ + A P G+ ++L S + LGDC + + G +
Sbjct: 327 HFGTMLPRRPALLRVSWPSGRVA---AAPAGELRARLASGGAACRVSFLGDCDVANDGCA 383
Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEE 452
S+A L N +L +++L+ N ++ QG L+++++ L+Q+ V + + + +E+
Sbjct: 384 SLASLLLANRSLRELDLSNNRMNDQGIRRLMESVEQPGCALEQL-VLYDIYWSQDIED 440
Score = 93 (37.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 30/141 (21%), Positives = 63/141 (44%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLG 59
+L AV + + TL + + N + G+ L + + + L L L +T L
Sbjct: 99 VLPAVLRSMPTLRELHLSDNPLEDAGLQLLCEGLLDPQCHLEKLQLEYCNLTAASCESLA 158
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAM 118
AL L + + + AG + + L ++ LE + L ++ DL +
Sbjct: 159 SALRNKQHFKELAVSNNEIGEAGVRVLCQGLVESACQLETLKLENCGLTPASCEDLRAVV 218
Query: 119 KNKTKLKQINVSENQFGEEGV 139
+KT L+++++ +N+ G++G+
Sbjct: 219 ASKTSLRELDLGDNKLGDQGI 239
Score = 72 (30.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 32/165 (19%), Positives = 68/165 (41%)
Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRHLNLNDNTITYKGAI 367
G + L V ++LE + + N + G L ++ E L+ L + T
Sbjct: 267 GCRDLCHVVSTKESLEELSLACNALGDEGAQLLCESLLEPGSRLQSLWVKSCNFTAACCH 326
Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN-EISVQGGLDLV 426
G L + P+L ++ + +A A + L V+ + +++ G L
Sbjct: 327 HFGTMLPRRPALLRVSWPSGRVAAAPAGELRARLASGGAACRVSFLGDCDVANDGCASLA 386
Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA-LVLED 470
+ L+++++S N+ ++G+ + + ++ G A LVL D
Sbjct: 387 SLLLANRSLRELDLSNNRMNDQGIRRLMESVEQPGCALEQLVLYD 431
Score = 63 (27.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 60 QALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAM 118
+ L + ++ L DC L I+ L N +L +++L NE+ G+ LV + +
Sbjct: 17 ELLPLIQQYEVVRLDDCGLTEVRCKDISSALQANPSLTELSLCTNELG-DAGVHLVLQGL 75
Query: 119 KNKT-KLKQINVSENQFGEEGVEEMEKLMKS 148
++ T K++++++ + G + +++S
Sbjct: 76 QSPTCKIQKLSLQNCCLTKTGCGVLPAVLRS 106
Score = 40 (19.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 271 GCKLLSKALHDCYESSKKEGSPLALK 296
GC L L+D Y S E S AL+
Sbjct: 421 GCALEQLVLYDIYWSQDIEDSLRALE 446
>UNIPROTKB|F1MMJ6 [details] [associations]
symbol:LRRC16A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046415 "urate metabolic process" evidence=IEA]
[GO:0031529 "ruffle organization" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0016477
GO:GO:0030027 GO:GO:0046415 GO:GO:0030032 GO:GO:0031529 CTD:55604
OMA:TLIVWLS GeneTree:ENSGT00390000014487 EMBL:DAAA02055508
EMBL:DAAA02055509 EMBL:DAAA02055510 EMBL:DAAA02055511
EMBL:DAAA02055512 EMBL:DAAA02055513 EMBL:DAAA02055514
IPI:IPI00701540 RefSeq:NP_001179832.1 UniGene:Bt.3042
ProteinModelPortal:F1MMJ6 PRIDE:F1MMJ6 Ensembl:ENSBTAT00000022015
GeneID:537314 KEGG:bta:537314 NextBio:20877112 Uniprot:F1MMJ6
Length = 1330
Score = 125 (49.1 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL--NDNTIT 362
L + GA++L ++ + +++ NG+ ++ L +N++++HL L N N +
Sbjct: 466 LRSGGAQVLEGCIAEIHNISSLDISDNGL-ESDLSTLIVWLSKNRSIQHLALGKNFNNMK 524
Query: 363 YKGAIP----LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
K P L Q + S L L+L D LK+ G + I L NT+L V+++ N +
Sbjct: 525 SKNLTPVLDNLVQMIQDEESPLQSLSLADSKLKT-GVTIIINALGSNTSLTKVDISGNGM 583
Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
G L KA++ TKL+ + +N +G +++ M+
Sbjct: 584 GDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAME 624
Score = 103 (41.3 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 41/154 (26%), Positives = 75/154 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLP---- 66
L + + N + G+++LS F + K L+HLNL+ +++ KG L Q+LS P
Sbjct: 278 LHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTAT 337
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV--KAMKNKTK- 123
+L L+L +L+ SS+ +L + ++L+ E S LD+V ++ +
Sbjct: 338 TLVHLDLSGNILRGDDLSSMYSFLAQPNAIAHLDLSNTECS----LDMVCGALLRGCLQY 393
Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
L +N+S F +E+ K F +++L L
Sbjct: 394 LAVLNLSRTVFSHRKGKEVPPSFKQF-FSSSLAL 426
Score = 80 (33.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/89 (32%), Positives = 42/89 (47%)
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+E L+ L+L D+ + G + AL SL +++ + GA +AK L NT
Sbjct: 541 DEESPLQSLSLADSKLK-TGVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINT 599
Query: 406 TLEDVNLTCNEISVQGGLDLVKAM-KNKT 433
L V N I+ QG D+ AM KN T
Sbjct: 600 KLRTVIWDKNNITAQGFQDIAVAMEKNYT 628
Score = 74 (31.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 290 GSPLAL-KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
GS +L KV I+G N + + GAKMLA + L V +N I G ++ A E+N
Sbjct: 568 GSNTSLTKVDISG-NGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKN 626
Query: 349 KNLRHLNLN--DNTITYK-GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
LR + + D + K +AL K+ + + N A + + + +T
Sbjct: 627 YTLRFMPIPMYDASQALKTNPEKTEEALQKIENYLLRNHETRKYLQEQAYRLQQGIVTST 686
Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
T + ++ C + VQ L+ +++ + + + +E
Sbjct: 687 TQQMIDRMC--VKVQDHLNSLRSCEGDAVQEDLKSAE 721
Score = 71 (30.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 26/103 (25%), Positives = 50/103 (48%)
Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
K L+ L + + + E SPL + +A ++L+ G ++ +L +V++ NG
Sbjct: 526 KNLTPVLDNLVQMIQDEESPLQ-SLSLAD-SKLKT-GVTIIINALGSNTSLTKVDISGNG 582
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
+ +G L+ A + N LR + + N IT +G + A+ K
Sbjct: 583 MGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEK 625
Score = 64 (27.6 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 35/152 (23%), Positives = 68/152 (44%)
Query: 2 LAAVFKKL-KTLEHVEMPQNGIYHVGITALSDAFEENK----KLRHLNLNDNTITYKGAI 56
L+ F KL K L+H+ + + + G+ +LS + N L HL+L+ N +
Sbjct: 296 LSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTATTLVHLDLSGNILRGDDLS 355
Query: 57 PLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
+ L++ ++A L+L +C L + + L L +NL+ S + G ++
Sbjct: 356 SMYSFLAQPNAIAHLDLSNTECSLDMVCGALLRGCLQ---YLAVLNLSRTVFSHRKGKEV 412
Query: 115 VKAMK----NKTKLKQINVSENQFGEEGVEEM 142
+ K + L QIN+S + E ++ +
Sbjct: 413 PPSFKQFFSSSLALMQINLSGTKLSPEPLKAL 444
>ZFIN|ZDB-GENE-050208-7 [details] [associations]
symbol:ppp1r37 "protein phosphatase 1, regulatory
subunit 37" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0019902 "phosphatase binding"
evidence=ISS] [GO:0010923 "negative regulation of phosphatase
activity" evidence=ISS] [GO:0004864 "protein phosphatase inhibitor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050208-7 GO:GO:0004864 GO:GO:0010923 GO:GO:0019902
GeneTree:ENSGT00640000091171 eggNOG:NOG259751 HOGENOM:HOG000074153
OrthoDB:EOG4SJ5DQ EMBL:CR381630 EMBL:BC124387 EMBL:BC141792
IPI:IPI00495067 RefSeq:NP_001073636.1 UniGene:Dr.20530
UniGene:Dr.76864 ProteinModelPortal:Q1L994
Ensembl:ENSDART00000086541 Ensembl:ENSDART00000139327 GeneID:562516
NextBio:20884451 Bgee:Q1L994 Uniprot:Q1L994
Length = 919
Score = 117 (46.2 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 37/176 (21%), Positives = 77/176 (43%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
L + N+L + G LAA ++LE + + N + + G+ L D N+++ L
Sbjct: 455 LVTLVLWNNQLTHNGMGYLAAALPFTQSLETLNLGHNAVGNEGVHKLKDGLISNRSILRL 514
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
L ++ +GA+ + + +++ P L L++ + +K+ G +++ NT+L ++L
Sbjct: 515 GLASTKLSCEGAVAIAEFIAESPRLLRLDMRENEIKTGGLMALSLAFKVNTSLLRLDLD- 573
Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLED 470
E + ++ + Q N EE E+ M+ A + ED
Sbjct: 574 REPKKETVKSFIETQRALLADIQNGCKRNFILAREKEETEQKMRLSASMAEIATED 629
Score = 112 (44.5 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 36/165 (21%), Positives = 77/165 (46%)
Query: 296 KVFIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRH 353
++++A N+L + + L + K ++ +++ N I G+ + + E+ K L
Sbjct: 399 ELYLA-ENKLNGLQDSAQLGNLLKFNYNIQILDLRNNHILDSGLAYVCEGLKEQRKGLVT 457
Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
L L +N +T+ G L AL SL LNLG + + G + L N ++ + L
Sbjct: 458 LVLWNNQLTHNGMGYLAAALPFTQSLETLNLGHNAVGNEGVHKLKDGLISNRSILRLGLA 517
Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
++S +G + + + + +L ++++ EN+ G+ + K
Sbjct: 518 STKLSCEGAVAIAEFIAESPRLLRLDMRENEIKTGGLMALSLAFK 562
Score = 107 (42.7 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 37/148 (25%), Positives = 75/148 (50%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNT-ITYKGAIPLGQ 60
L +FK+++ + V++ Q + G +AL D E + HLN+++N I +G
Sbjct: 275 LEEIFKRVQ-FKLVDLEQTNLDEDGASALFDMIEYYESATHLNISNNKHIGTRGWQAAAH 333
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ K SL L+ + L A +A+ L +++L ++L + IS + + L A+K
Sbjct: 334 MMRKTNSLQYLDARNTPLLDHSAPFVARALRISSSLTVLHLENSGISGRPLMLLATALKM 393
Query: 121 KTKLKQINVSENQF-GEEGVEEMEKLMK 147
L+++ ++EN+ G + ++ L+K
Sbjct: 394 NMNLRELYLAENKLNGLQDSAQLGNLLK 421
Score = 106 (42.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 36/139 (25%), Positives = 66/139 (47%)
Query: 303 NRLENEG-AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N + + G A + + ++ K L + + N + H G+ L+ A ++L LNL N +
Sbjct: 434 NHILDSGLAYVCEGLKEQRKGLVTLVLWNNQLTHNGMGYLAAALPFTQSLETLNLGHNAV 493
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
+G L L S+ L L L GA +IA+++ ++ L +++ NEI G
Sbjct: 494 GNEGVHKLKDGLISNRSILRLGLASTKLSCEGAVAIAEFIAESPRLLRLDMRENEIKTGG 553
Query: 422 GLDLVKAMKNKTKLKQINV 440
+ L A K T L ++++
Sbjct: 554 LMALSLAFKVNTSLLRLDL 572
Score = 87 (35.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/167 (23%), Positives = 66/167 (39%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
+L+ G N + NEG L +++ R+ + + G A+++ E+ L
Sbjct: 482 SLETLNLGHNAVGNEGVHKLKDGLISNRSILRLGLASTKLSCEGAVAIAEFIAESPRLLR 541
Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
L++ +N I G + L A SL L+L D K S + T L D+
Sbjct: 542 LDMRENEIKTGGLMALSLAFKVNTSLLRLDL-DREPKKETVKSFIE--TQRALLADIQNG 598
Query: 414 C--NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
C N I + + + M+ + +I + EE EE L K
Sbjct: 599 CKRNFILAREKEETEQKMRLSASMAEIATEDQTHEEEEEEEASPLKK 645
>UNIPROTKB|A6QLE5 [details] [associations]
symbol:NLRP3 "NACHT, LRR and PYD domains-containing protein
3" species:9913 "Bos taurus" [GO:0072559 "NLRP3 inflammasome
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=IEA] [GO:0050701
"interleukin-1 secretion" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0032621 "interleukin-18 production" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] GO:GO:0005524 GO:GO:0005737 GO:GO:0050728
GO:GO:0006954 GO:GO:0051607 GO:GO:0006919 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
GO:GO:0072559 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347
eggNOG:NOG82860 GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
EMBL:BC147936 IPI:IPI00708191 RefSeq:NP_001095689.1
UniGene:Bt.61644 ProteinModelPortal:A6QLE5 STRING:A6QLE5
PRIDE:A6QLE5 Ensembl:ENSBTAT00000001675 GeneID:538639
KEGG:bta:538639 CTD:114548 InParanoid:A6QLE5 KO:K12800 OMA:SSHCCWD
OrthoDB:EOG4HX508 NextBio:20877489 GO:GO:0050701 GO:GO:0032621
InterPro:IPR003590 SMART:SM00368 Uniprot:A6QLE5
Length = 1031
Score = 154 (59.3 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 63/241 (26%), Positives = 102/241 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L +LVELDLS NA G G+ L LR C + C L S +
Sbjct: 789 LSNNQKLVELDLSHNALGDFGIRLLCVGLRHLFC--------NLKKLWLVSCCLTSASCE 840
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
D +S + ++++ G N L + G +L K L+++ + +G+
Sbjct: 841 DL--ASVLSTNHSLTRLYL-GENALGDSGVGILCEKVKNPHCNLQKLGLVNSGLTSGCCP 897
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIA 398
ALS N+NL HL L N + G L + L + L +L L +C L S ++
Sbjct: 898 ALSSVLSTNQNLTHLYLQGNALGDMGVKLLCEGLLHRNCKLQVLELDNCSLTSHCCWDLS 957
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLM 457
LT N +L + L N++ G + L + +K + LK + + E F + +E L
Sbjct: 958 TLLTSNQSLRKLCLGNNDLGDLGVMLLCEVLKQQGCLLKSLRLCEMYFNYDTKRALETLQ 1017
Query: 458 K 458
+
Sbjct: 1018 E 1018
Score = 68 (29.0 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 37 NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNT 94
N L LNL+ NT+ G L + L + P I L LG C L +I+ L++N
Sbjct: 735 NWNLTELNLSGNTLGDPGMNVLCETLQQ-PGCNIRRLWLGQCCLSHQCCFNISSVLSNNQ 793
Query: 95 TLEDVNLTCNEI 106
L +++L+ N +
Sbjct: 794 KLVELDLSHNAL 805
Score = 43 (20.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFG 150
+ + N L ++N+S N G+ G+ + + ++ G
Sbjct: 728 IFSVLSNNWNLTELNLSGNTLGDPGMNVLCETLQQPG 764
Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 78 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
L S+ I L++N L ++NL+ N + G
Sbjct: 720 LTSSICRGIFSVLSNNWNLTELNLSGNTLGDPG 752
>DICTYBASE|DDB_G0289313 [details] [associations]
symbol:frmC "Band 4.1 domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000299 PROSITE:PS50057 dictyBase:DDB_G0289313
GO:GO:0005856 Gene3D:1.20.80.10 InterPro:IPR019749
InterPro:IPR019750 InterPro:IPR014352 InterPro:IPR019748
InterPro:IPR018979 Pfam:PF00373 Pfam:PF09379 PRINTS:PR00935
SMART:SM00295 SUPFAM:SSF47031 PROSITE:PS00660 PROSITE:PS00661
EMBL:AAFI02000138 EMBL:AAFI02000137 ProteinModelPortal:P0CD60
OMA:VICITED Uniprot:P0CD60
Length = 1489
Score = 122 (48.0 bits), Expect = 0.00080, P = 0.00080
Identities = 32/115 (27%), Positives = 57/115 (49%)
Query: 342 SDAFEENK------NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 395
+DAFE K + HLNL + ++ KG +PL + K P++ L +G + +G
Sbjct: 1070 TDAFEPLKIIMTCNTIIHLNLKNIGLSNKGVMPLVTIIEKYPNIETLQIGKNRVNESGVR 1129
Query: 396 SIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
I + + + N +E + ++ G L + K + N +K +N+S+N EEG
Sbjct: 1130 VILRAIKNFNVKIETLGFEETNLTDSGCLIIDKLLSNNKTIKNLNISKNLITEEG 1184
Score = 121 (47.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 32/115 (27%), Positives = 57/115 (49%)
Query: 31 SDAFEENKKLR------HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGAS 84
+DAFE K + HLNL + ++ KG +PL + K P++ L +G + +G
Sbjct: 1070 TDAFEPLKIIMTCNTIIHLNLKNIGLSNKGVMPLVTIIEKYPNIETLQIGKNRVNESGVR 1129
Query: 85 SIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 138
I + + + N +E + ++ G L + K + N +K +N+S+N EEG
Sbjct: 1130 VILRAIKNFNVKIETLGFEETNLTDSGCLIIDKLLSNNKTIKNLNISKNLITEEG 1184
Score = 118 (46.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 34/159 (21%), Positives = 70/159 (44%)
Query: 301 GRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
G+NR+ G +++ K +E + + + G + NK +++LN++ N
Sbjct: 1119 GKNRVNESGVRVILRAIKNFNVKIETLGFEETNLTDSGCLIIDKLLSNNKTIKNLNISKN 1178
Query: 360 TITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEI 417
IT +G + + + + SL LN+ + S K+L + T++ +N+ +
Sbjct: 1179 LITEEGFHHIFEGIKRNSLSLQDLNISGNKINSKLMIKFIKWLASSETSIITLNIAKTGL 1238
Query: 418 SVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEK 455
G +L K + N +K ++ S N G G + + K
Sbjct: 1239 ESSFGAELQKFLVGNSCHIKSLDTSYNDLGTSGTKNVIK 1277
Score = 110 (43.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 31/143 (21%), Positives = 73/143 (51%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQ 60
L + +K +E +++ +N + G+ + A + N K+ L + +T G + + +
Sbjct: 1103 LVTIIEKYPNIETLQIGKNRVNESGVRVILRAIKNFNVKIETLGFEETNLTDSGCLIIDK 1162
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAM- 118
LS ++ LN+ L+ G I + + N+ +L+D+N++ N+I+ + + +K +
Sbjct: 1163 LLSNNKTIKNLNISKNLITEEGFHHIFEGIKRNSLSLQDLNISGNKINSKLMIKFIKWLA 1222
Query: 119 KNKTKLKQINVS----ENQFGEE 137
++T + +N++ E+ FG E
Sbjct: 1223 SSETSIITLNIAKTGLESSFGAE 1245
Score = 106 (42.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 37/171 (21%), Positives = 77/171 (45%)
Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
K+ S +D +S + S K+++ L + +A + + KT+ +++ N
Sbjct: 1294 KISSSGCNDLCQSLEL-ASATCSKLYLRHCG-LGSSSLVRIANMLELNKTITTLDLSMNE 1351
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
+A+ E+N+ L+ L D+++ + + L ++ + L +
Sbjct: 1352 FSKSSSSAIGTMLEKNETLQEFYLADSSLGAREVESILNGLKNNSTIKKIFLDTNPIGKK 1411
Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
G SS+A L NT LE + L ++ + L+L+K + +K IN++EN
Sbjct: 1412 GISSLANMLNTNTGLEVITLRHTNLNGKDILELLKQLSTNIPIKIINLTEN 1462
Score = 105 (42.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 35/156 (22%), Positives = 70/156 (44%)
Query: 303 NRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N++ + G L + T ++ + G+ + +++ E NK + L+L+ N
Sbjct: 1293 NKISSSGCNDLCQSLELASATCSKLYLRHCGLGSSSLVRIANMLELNKTITTLDLSMNEF 1352
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
+ + +G L K +L L D L + SI L +N+T++ + L N I +G
Sbjct: 1353 SKSSSSAIGTMLEKNETLQEFYLADSSLGAREVESILNGLKNNSTIKKIFLDTNPIGKKG 1412
Query: 422 GLDLVKAMKNKTKLKQINVSE-NQFGEEGVEEMEKL 456
L + T L+ I + N G++ +E +++L
Sbjct: 1413 ISSLANMLNTNTGLEVITLRHTNLNGKDILELLKQL 1448
Score = 91 (37.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 29/136 (21%), Positives = 60/136 (44%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAI 70
+E + + + G + NK +++LN++ N IT +G + + + + SL
Sbjct: 1142 IETLGFEETNLTDSGCLIIDKLLSNNKTIKNLNISKNLITEEGFHHIFEGIKRNSLSLQD 1201
Query: 71 LNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQIN 128
LN+ + S K+L + T++ +N+ + G +L K + N +K ++
Sbjct: 1202 LNISGNKINSKLMIKFIKWLASSETSIITLNIAKTGLESSFGAELQKFLVGNSCHIKSLD 1261
Query: 129 VSENQFGEEGVEEMEK 144
S N G G + + K
Sbjct: 1262 TSYNDLGTSGTKNVIK 1277
Score = 85 (35.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/115 (19%), Positives = 49/115 (42%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N + + + +K +TL+ + + + + ++ + + N ++ + L+ N I
Sbjct: 1350 NEFSKSSSSAIGTMLEKNETLQEFYLADSSLGAREVESILNGLKNNSTIKKIFLDTNPIG 1409
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
KG L L+ L ++ L L + K L+ N ++ +NLT N +
Sbjct: 1410 KKGISSLANMLNTNTGLEVITLRHTNLNGKDILELLKQLSTNIPIKIINLTENTL 1464
Score = 73 (30.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 30/146 (20%), Positives = 67/146 (45%)
Query: 6 FKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
F+ E VE+P + ++ ++DA ++ LNL I G+++ +
Sbjct: 1009 FRNRLAFEKVELPSLNLRGSDLSFIADALKDT-----LNL---------IIEEGESIVEN 1054
Query: 66 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
++ L+L + L + A K + T+ +NL +S +G + LV ++ ++
Sbjct: 1055 LNILSLDLSNNPLLATDAFEPLKIIMTCNTIIHLNLKNIGLSNKGVMPLVTIIEKYPNIE 1114
Query: 126 QINVSENQFGEEGVEEMEKLMKSFGM 151
+ + +N+ E GV + + +K+F +
Sbjct: 1115 TLQIGKNRVNESGVRVILRAIKNFNV 1140
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
L ++G ++ K + +N T+ +++L N+IS G DL ++++
Sbjct: 1267 LGTSGTKNVIKGIINNQTITELSLCANKISSSGCNDLCQSLE 1308
>RGD|1562269 [details] [associations]
symbol:Nod1 "nucleotide-binding oligomerization domain
containing 1" species:10116 "Rattus norvegicus" [GO:0002606
"positive regulation of dendritic cell antigen processing and
presentation" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0016045 "detection of bacterium"
evidence=IEA;ISO] [GO:0016323 "basolateral plasma membrane"
evidence=IEA;ISO] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA;ISO] [GO:0032760 "positive regulation of
tumor necrosis factor production" evidence=IEA;ISO] [GO:0032874
"positive regulation of stress-activated MAPK cascade"
evidence=ISO] [GO:0035556 "intracellular signal transduction"
evidence=IEA;ISO] [GO:0042228 "interleukin-8 biosynthetic process"
evidence=IEA;ISO] [GO:0042742 "defense response to bacterium"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=IEA;ISO]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA;ISO] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA;ISO] [GO:0050700 "CARD domain binding"
evidence=IEA;ISO] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA;ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA;ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA;ISO] InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
RGD:1562269 GO:GO:0005737 GO:GO:0016045 GO:GO:0006917 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0016323 GO:GO:0032755 GO:GO:0006919 GO:GO:0051092
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606 CTD:10392
KO:K08727 OMA:NDYGVRE OrthoDB:EOG4WH8K2 GO:GO:0042228
GeneTree:ENSGT00660000095240 EMBL:CH474011 IPI:IPI00209456
RefSeq:NP_001102706.1 UniGene:Rn.53929 Ensembl:ENSRNOT00000014324
GeneID:500133 KEGG:rno:500133 UCSC:RGD:1562269 NextBio:705213
Uniprot:D4ADT7
Length = 953
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + G K+L K K + + + N I +G ++ +E + L HL L N IT
Sbjct: 738 NQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLGKNRIT 797
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+G + QA+ S+ + + + GA + A+ L D+ +L ++L N IS +GG
Sbjct: 798 SEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGG 857
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L +A+K T L I +++N+ +E E ++++
Sbjct: 858 KSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLR 893
Score = 157 (60.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 50/162 (30%), Positives = 81/162 (50%)
Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
G+NR+ +EG + +A K ++ V M N I G A ++A ++ +L L+L N
Sbjct: 792 GKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNG 851
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
I+ +G L QAL + +L I+ L L A A+ L N TL+ + L N I+ +
Sbjct: 852 ISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKHLWLIQNHITAE 911
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFG-EEG-VEEMEKLMKSF 460
G L +A++ T + +I ++ N EE V E EK + F
Sbjct: 912 GTAQLARALQKNTTITEICLNGNLIKPEEAKVFENEKRIICF 953
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 39/147 (26%), Positives = 73/147 (49%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+L K K + + + N I +G ++ +E + L HL L N IT +G + Q
Sbjct: 747 VLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQ 806
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
A+ S+ + + + GA + A+ L D+ +L ++L N IS +GG L +A+K
Sbjct: 807 AVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQ 866
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
T L I +++N+ +E E ++++
Sbjct: 867 NTTLTIIWLTKNELNDEAAECFAEMLR 893
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
C LS LH + LAL + N L + G + L F +L T+ R+ + N
Sbjct: 692 CSALSFVLHHFHRQ-------LALDL---DNNNLNDYGVRELQPCFSRL-TVIRLSV--N 738
Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
I +G+ L + + K + L L +N IT GA + Q L + L L LG + S
Sbjct: 739 QITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLGKNRITS 798
Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
G +A+ + ++T++ +V + N+I +G +A+++ L ++++ N EG +
Sbjct: 799 EGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGGK 858
Query: 452 EMEKLMK 458
+ + +K
Sbjct: 859 SLAQALK 865
Score = 139 (54.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 37/156 (23%), Positives = 78/156 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + GA+ +A + + + L +++ +N I G ++ A + + ++ + + N I
Sbjct: 766 NQITDIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIG 825
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+GA +AL PSL L+L + G S+A+ L NTTL + LT NE++ +
Sbjct: 826 DEGAKAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAA 885
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+ ++ LK + + +N EG ++ + ++
Sbjct: 886 ECFAEMLRVNQTLKHLWLIQNHITAEGTAQLARALQ 921
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+++ N + G+ L F +L + L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVRELQPCFS---RLTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLY 764
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ + GA +A+ L + L + L N I+ +GG + +A+KN T + ++ + NQ
Sbjct: 765 NNQITDIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQI 824
Query: 135 GEEGVEEMEKLMKSFGMAAALVL 157
G+EG + + ++ L L
Sbjct: 825 GDEGAKAFAEALRDHPSLTTLSL 847
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 35/146 (23%), Positives = 71/146 (48%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A + + + L H+++ +N I G ++ A + + + + + N I +GA +A
Sbjct: 776 VAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEA 835
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L PSL L+L + G S+A+ L NTTL + LT NE++ + + ++
Sbjct: 836 LRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLRVN 895
Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
LK + + +N EG ++ + ++
Sbjct: 896 QTLKHLWLIQNHITAEGTAQLARALQ 921
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
+++ N + G+ L F L + L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVRELQPCFSR---LTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLY 764
Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
+ + GA +A+ L + L + L N I+ +GG + +A+KN T + ++ + NQ
Sbjct: 765 NNQITDIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQI 824
Query: 446 GEEGVEEMEKLMKSFGMAAALVL 468
G+EG + + ++ L L
Sbjct: 825 GDEGAKAFAEALRDHPSLTTLSL 847
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 32/133 (24%), Positives = 66/133 (49%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+ + N I +G+ L + + K + L L +N IT GA + Q L + L L LG
Sbjct: 733 IRLSVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLG 792
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ S G +A+ + ++T++ +V + N+I +G +A+++ L ++++ N
Sbjct: 793 KNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGI 852
Query: 135 GEEGVEEMEKLMK 147
EG + + + +K
Sbjct: 853 SPEGGKSLAQALK 865
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 45/150 (30%), Positives = 71/150 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A K ++ V M N I G A ++A ++ L L+L N I+ +G L QA
Sbjct: 804 VAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPEGGKSLAQA 863
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + +L I+ L L A A+ L N TL+ + L N I+ +G L +A++
Sbjct: 864 LKQNTTLTIIWLTKNELNDEAAECFAEMLRVNQTLKHLWLIQNHITAEGTAQLARALQKN 923
Query: 122 TKLKQINVSENQFG-EEG-VEEMEKLMKSF 149
T + +I ++ N EE V E EK + F
Sbjct: 924 TTITEICLNGNLIKPEEAKVFENEKRIICF 953
>MGI|MGI:2687042 [details] [associations]
symbol:Ppp1r37 "protein phosphatase 1, regulatory subunit
37" species:10090 "Mus musculus" [GO:0004864 "protein phosphatase
inhibitor activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0010923 "negative regulation of phosphatase
activity" evidence=ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0043086 "negative regulation of catalytic
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2687042 GO:GO:0004864 GO:GO:0010923 GO:GO:0019902
GeneTree:ENSGT00640000091171 CTD:284352 eggNOG:NOG259751
HOGENOM:HOG000074153 HOVERGEN:HBG108102 OMA:GMTLPHT
OrthoDB:EOG4SJ5DQ EMBL:AK050946 EMBL:BC070402 IPI:IPI00279642
RefSeq:NP_954600.1 UniGene:Mm.219662 ProteinModelPortal:Q8BKR5
SMR:Q8BKR5 PhosphoSite:Q8BKR5 PaxDb:Q8BKR5 PRIDE:Q8BKR5
Ensembl:ENSMUST00000058444 GeneID:232947 KEGG:mmu:232947
UCSC:uc009fmh.1 InParanoid:Q8BKR5 NextBio:381365 Bgee:Q8BKR5
Genevestigator:Q8BKR5 Uniprot:Q8BKR5
Length = 712
Score = 121 (47.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 36/165 (21%), Positives = 81/165 (49%)
Query: 296 KVFIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRH 353
++++A N+L + + L + K +L+ +++ N + G+ + + E+ K L
Sbjct: 257 ELYLAD-NKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQRKGLVT 315
Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
L L +N +T+ G LG AL SL LNLG + + G ++ L N ++ + L
Sbjct: 316 LVLWNNQLTHTGMAFLGMALPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLA 375
Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+++ +G + + + + +L ++++ EN+ G+ + +K
Sbjct: 376 STKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALK 420
Score = 118 (46.6 bits), Expect = 0.00091, P = 0.00091
Identities = 31/138 (22%), Positives = 69/138 (50%)
Query: 11 TLEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
+L+ +++ N + G+ + + +E +K L L L +N +T+ G LG AL SL
Sbjct: 283 SLQILDLRNNHVLDSGLAYICEGLKEQRKGLVTLVLWNNQLTHTGMAFLGMALPHTQSLE 342
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
LNLG + + G ++ L N ++ + L +++ +G + + + + +L ++++
Sbjct: 343 TLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDL 402
Query: 130 SENQFGEEGVEEMEKLMK 147
EN+ G+ + +K
Sbjct: 403 RENEIKTGGLMALSLALK 420
Score = 109 (43.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 43/193 (22%), Positives = 83/193 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEG-LADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK L EL L+DN + L +LL+ +C + +L L
Sbjct: 249 LKMNMNLRELYLADNKLNGLQDSAQLGNLLKFNCSLQILD---------LRNNHVLDSGL 299
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
E K++ L + N+L + G L ++LE + + N I + G+
Sbjct: 300 AYICEGLKEQRKGLV--TLVLWNNQLTHTGMAFLGMALPHTQSLETLNLGHNPIGNEGVR 357
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
L + N+++ L L +T +GA+ + + +++ P L L+L + +K+ G +++
Sbjct: 358 NLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSL 417
Query: 400 YLTDNTTLEDVNL 412
L N +L ++L
Sbjct: 418 ALKVNHSLLRLDL 430
Score = 108 (43.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 40/167 (23%), Positives = 76/167 (45%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
+L++ N + + G + K+ K L + + N + H G+ L A ++L
Sbjct: 283 SLQILDLRNNHVLDSGLAYICEGLKEQRKGLVTLVLWNNQLTHTGMAFLGMALPHTQSLE 342
Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
LNL N I +G L L S+ L L L GA ++A+++ ++ L ++L
Sbjct: 343 TLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDL 402
Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
NEI G + L A+K L ++++ + + +E V+ + K+
Sbjct: 403 RENEIKTGGLMALSLALKVNHSLLRLDL-DREPKKEPVKSFIETQKA 448
Score = 96 (38.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 36/148 (24%), Positives = 71/148 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNT-ITYKGAIPLGQ 60
L VFK+L+ + V++ Q + G +AL D E + HLN++ N I +G
Sbjct: 133 LEEVFKRLQ-FKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAH 191
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ K L L+ + L A +A+ L ++L ++L +S + + L A+K
Sbjct: 192 MMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKM 251
Query: 121 KTKLKQINVSENQF-GEEGVEEMEKLMK 147
L+++ +++N+ G + ++ L+K
Sbjct: 252 NMNLRELYLADNKLNGLQDSAQLGNLLK 279
Score = 67 (28.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 3 AAVFKKLKTLE---HVEMPQNGIYHVGITALSDAFEENKK---LRHLNLNDNTITYKGAI 56
+A+F ++ E H+ + N H+G A +K L++L+ + + A
Sbjct: 158 SALFDMIEYYESATHLNISFNK--HIGTRGWQAAAHMMRKTSCLQYLDARNTPLLDHSAP 215
Query: 57 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS-VQGGLDLV 115
+ +AL SLA+L+L + L +A L N L ++ L N+++ +Q L
Sbjct: 216 FVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMNLRELYLADNKLNGLQDSAQLG 275
Query: 116 KAMKNKTKLKQINVSENQFGEEGV 139
+K L+ +++ N + G+
Sbjct: 276 NLLKFNCSLQILDLRNNHVLDSGL 299
>ZFIN|ZDB-GENE-081028-16 [details] [associations]
symbol:si:ch211-233m11.1 "si:ch211-233m11.1"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-081028-16 GO:GO:0005524
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00690000101934
EMBL:BX571701 IPI:IPI00861537 Ensembl:ENSDART00000138143
Uniprot:F1QBA5
Length = 1057
Score = 135 (52.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 66/244 (27%), Positives = 107/244 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L++ L ELDLS N GV+ L+D L+ C GC L+ AL
Sbjct: 786 LRSNLNLRELDLSGNKLRDSGVKLLSDGLKD-CKLEILRLCYCGISDE--GCAALALALR 842
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
S+ +E + + G NRL + G K+L+A K LE + + GI + G
Sbjct: 843 SA-SSNLRE-------LDLIG-NRLGDSGVKLLSAGLKNPHCKLEALRLKNCGITNKGCD 893
Query: 340 ALSDAFEE--NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
AL+ A NLR L+L DN + G L L P + L C + + +
Sbjct: 894 ALASALRSVSTANLRELDLCDNRLRDSGVRLLSARLED-PHCKLEKLRLCNCEIEDCADL 952
Query: 398 AKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEK 455
A L N++ L +++LT N++ G L +K+ KL+++ + + +EG +
Sbjct: 953 ASTLKLNSSNLRELDLTGNKLGDSGVKLLSDGLKDAHCKLEKLRLIKCGITDEGCTALAS 1012
Query: 456 LMKS 459
++S
Sbjct: 1013 ALRS 1016
Score = 128 (50.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 54/197 (27%), Positives = 90/197 (45%)
Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMP 329
GC +LS AL + S+ +E L L G +R+ K+L A K LE++ +
Sbjct: 720 GCAVLSSALSS-HSSNLRE---LNLTEIYVGDSRV-----KLLFAALKDPHCKLEKLMLF 770
Query: 330 QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 389
GI + G L+ A N NLR L+L+ N + G L L L IL L C +
Sbjct: 771 NCGISNEGSADLASALRSNLNLRELDLSGNKLRDSGVKLLSDGLKDC-KLEILRLCYCGI 829
Query: 390 KSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKA-MKNK-TKLKQINVSENQFG 446
G +++A L ++ L +++L N + G+ L+ A +KN KL+ + +
Sbjct: 830 SDEGCAALALALRSASSNLRELDLIGNRLG-DSGVKLLSAGLKNPHCKLEALRLKNCGIT 888
Query: 447 EEGVEEMEKLMKSFGMA 463
+G + + ++S A
Sbjct: 889 NKGCDALASALRSVSTA 905
Score = 105 (42.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 54/215 (25%), Positives = 90/215 (41%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+ L ELDL N G GV+ L+ L++ C + C + +K D
Sbjct: 846 SNLRELDLIGNRLGDSGVKLLSAGLKNPHC--------KLEALRLKNCGITNKGC-DALA 896
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSD 343
S+ + S L+ NRL + G ++L+A + LE++ + I A S
Sbjct: 897 SALRSVSTANLRELDLCDNRLRDSGVRLLSARLEDPHCKLEKLRLCNCEIEDCADLA-ST 955
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYL- 401
+ NLR L+L N + G L L L L L C + G +++A L
Sbjct: 956 LKLNSSNLRELDLTGNKLGDSGVKLLSDGLKDAHCKLEKLRLIKCGITDEGCTALASALR 1015
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 436
+ ++ L +++LT N + GG L+ +K+ K
Sbjct: 1016 SPSSNLRELDLTGNNVGDSGG-KLLSDVKDDPNCK 1049
Score = 85 (35.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 41 RHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTD-NTTLED 98
R L+ I+ +G L ALS S L LNL + + + + L D + LE
Sbjct: 707 RSARLSKCDISDEGCAVLSSALSSHSSNLRELNLTEIYVGDSRVKLLFAALKDPHCKLEK 766
Query: 99 VNL-TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
+ L C IS +G DL A+++ L+++++S N+ + GV+ + +K
Sbjct: 767 LMLFNCG-ISNEGSADLASALRSNLNLRELDLSGNKLRDSGVKLLSDGLK 815
Score = 82 (33.9 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 30/111 (27%), Positives = 57/111 (51%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
KL L L + I+ +G+ L AL +L L+L L+ +G ++ L D LE
Sbjct: 763 KLEKLMLFNCGISNEGSADLASALRSNLNLRELDLSGNKLRDSGVKLLSDGLKD-CKLEI 821
Query: 99 VNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEMEKLMKS 148
+ L IS +G L A+++ + L+++++ N+ G+ GV+ + +K+
Sbjct: 822 LRLCYCGISDEGCAALALALRSASSNLRELDLIGNRLGDSGVKLLSAGLKN 872
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
Q N+ + E+ VE+ E ++K G A L L
Sbjct: 429 QTNIKHKKHYEKTVEDEEIILK-LGKLAFLQL 459
>RGD|1595870 [details] [associations]
symbol:Ppp1r37 "protein phosphatase 1, regulatory subunit 37"
species:10116 "Rattus norvegicus" [GO:0004864 "protein phosphatase
inhibitor activity" evidence=IEA] [GO:0010923 "negative regulation
of phosphatase activity" evidence=IEA;ISO;ISS] [GO:0019902
"phosphatase binding" evidence=IEA;ISO;ISS] InterPro:IPR001611
PROSITE:PS51450 RGD:1595870 GO:GO:0004864 EMBL:CH473979
GO:GO:0010923 GO:GO:0019902 CTD:284352 eggNOG:NOG259751
HOGENOM:HOG000074153 HOVERGEN:HBG108102 OrthoDB:EOG4SJ5DQ
EMBL:BC166755 IPI:IPI00191328 RefSeq:NP_001100952.1 UniGene:Rn.7032
ProteinModelPortal:B2RYF1 GeneID:308398 KEGG:rno:308398
UCSC:RGD:1595870 NextBio:658768 ArrayExpress:B2RYF1
Genevestigator:B2RYF1 Uniprot:B2RYF1
Length = 710
Score = 121 (47.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 36/165 (21%), Positives = 81/165 (49%)
Query: 296 KVFIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRH 353
++++A N+L + + L + K +L+ +++ N + G+ + + E+ K L
Sbjct: 255 ELYLAD-NKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQRKGLVT 313
Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
L L +N +T+ G LG AL SL LNLG + + G ++ L N ++ + L
Sbjct: 314 LVLWNNQLTHTGMAFLGMALPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLA 373
Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+++ +G + + + + +L ++++ EN+ G+ + +K
Sbjct: 374 STKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALK 418
Score = 118 (46.6 bits), Expect = 0.00090, P = 0.00090
Identities = 31/138 (22%), Positives = 69/138 (50%)
Query: 11 TLEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
+L+ +++ N + G+ + + +E +K L L L +N +T+ G LG AL SL
Sbjct: 281 SLQILDLRNNHVLDSGLAYICEGLKEQRKGLVTLVLWNNQLTHTGMAFLGMALPHTQSLE 340
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
LNLG + + G ++ L N ++ + L +++ +G + + + + +L ++++
Sbjct: 341 TLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDL 400
Query: 130 SENQFGEEGVEEMEKLMK 147
EN+ G+ + +K
Sbjct: 401 RENEIKTGGLMALSLALK 418
Score = 110 (43.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 43/193 (22%), Positives = 83/193 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEG-LADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK L EL L+DN + L +LL+ +C + +L L
Sbjct: 247 LKMNMNLQELYLADNKLNGLQDSAQLGNLLKFNCSLQILD---------LRNNHVLDSGL 297
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
E K++ L + N+L + G L ++LE + + N I + G+
Sbjct: 298 AYICEGLKEQRKGLV--TLVLWNNQLTHTGMAFLGMALPHTQSLETLNLGHNPIGNEGVR 355
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
L + N+++ L L +T +GA+ + + +++ P L L+L + +K+ G +++
Sbjct: 356 NLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSL 415
Query: 400 YLTDNTTLEDVNL 412
L N +L ++L
Sbjct: 416 ALKVNHSLLRLDL 428
Score = 108 (43.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 40/167 (23%), Positives = 76/167 (45%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
+L++ N + + G + K+ K L + + N + H G+ L A ++L
Sbjct: 281 SLQILDLRNNHVLDSGLAYICEGLKEQRKGLVTLVLWNNQLTHTGMAFLGMALPHTQSLE 340
Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
LNL N I +G L L S+ L L L GA ++A+++ ++ L ++L
Sbjct: 341 TLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDL 400
Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
NEI G + L A+K L ++++ + + +E V+ + K+
Sbjct: 401 RENEIKTGGLMALSLALKVNHSLLRLDL-DREPKKEPVKSFIETQKA 446
Score = 95 (38.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 36/148 (24%), Positives = 71/148 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNT-ITYKGAIPLGQ 60
L VFK+L+ + V++ Q + G +AL D E + HLN++ N I +G
Sbjct: 131 LEEVFKRLQ-FKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAH 189
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ K L L+ + L A +A+ L ++L ++L +S + + L A+K
Sbjct: 190 MMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKM 249
Query: 121 KTKLKQINVSENQF-GEEGVEEMEKLMK 147
L+++ +++N+ G + ++ L+K
Sbjct: 250 NMNLQELYLADNKLNGLQDSAQLGNLLK 277
Score = 69 (29.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 32/144 (22%), Positives = 65/144 (45%)
Query: 3 AAVFKKLKTLE---HVEMPQNGIYHVGITALSDAFEENKK---LRHLNLNDNTITYKGAI 56
+A+F ++ E H+ + N H+G A +K L++L+ + + A
Sbjct: 156 SALFDMIEYYESATHLNISFNK--HIGTRGWQAAAHMMRKTSCLQYLDARNTPLLDHSAP 213
Query: 57 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS-VQGGLDLV 115
+ +AL SLA+L+L + L +A L N L+++ L N+++ +Q L
Sbjct: 214 FVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMNLQELYLADNKLNGLQDSAQLG 273
Query: 116 KAMKNKTKLKQINVSENQFGEEGV 139
+K L+ +++ N + G+
Sbjct: 274 NLLKFNCSLQILDLRNNHVLDSGL 297
>MGI|MGI:1341839 [details] [associations]
symbol:Nod1 "nucleotide-binding oligomerization domain
containing 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO;RCA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0006952 "defense response" evidence=RCA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016045 "detection of bacterium" evidence=ISO]
[GO:0016323 "basolateral plasma membrane" evidence=ISO] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IGI;IMP]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IGI;IMP] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=IDA] [GO:0035556
"intracellular signal transduction" evidence=ISO] [GO:0042228
"interleukin-8 biosynthetic process" evidence=ISO] [GO:0042742
"defense response to bacterium" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043123 "positive regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=ISO;IDA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IDA] [GO:0050700 "CARD domain
binding" evidence=ISO] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IGI;IMP] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IDA] InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 MGI:MGI:1341839 GO:GO:0005524 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0016324 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0045087 GO:GO:0016323 GO:GO:0032755 GO:GO:0006919
GO:GO:0051092 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0032760 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606
CTD:10392 eggNOG:NOG275503 HOGENOM:HOG000113813 HOVERGEN:HBG050793
KO:K08727 OMA:NDYGVRE OrthoDB:EOG4WH8K2 GO:GO:0042228 EMBL:AK082663
EMBL:AK089662 EMBL:BC042670 EMBL:BC043670 IPI:IPI00221820
RefSeq:NP_001164478.1 RefSeq:NP_766317.1 UniGene:Mm.28498
ProteinModelPortal:Q8BHB0 SMR:Q8BHB0 DIP:DIP-59535N STRING:Q8BHB0
PhosphoSite:Q8BHB0 PaxDb:Q8BHB0 PRIDE:Q8BHB0
Ensembl:ENSMUST00000060655 Ensembl:ENSMUST00000168172 GeneID:107607
KEGG:mmu:107607 GeneTree:ENSGT00660000095240 InParanoid:Q8BHB0
NextBio:359142 Bgee:Q8BHB0 Genevestigator:Q8BHB0
GermOnline:ENSMUSG00000038058 Uniprot:Q8BHB0
Length = 953
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 41/156 (26%), Positives = 79/156 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + G K+L K K + + + N I +G ++ +E + L+HL L N IT
Sbjct: 738 NQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLGKNRIT 797
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+G + A+ S+ + + + GA + A+ L D+ +L ++L N IS +GG
Sbjct: 798 SEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNGISPEGG 857
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L +A+K T L I +++N+ +E E ++++
Sbjct: 858 KSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLR 893
Score = 158 (60.7 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
LK G+NR+ +EG K +A K ++ V M N I G A ++A +++ +L L
Sbjct: 786 LKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTL 845
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
+L N I+ +G L QAL + +L ++ L L A A+ L N TL + L
Sbjct: 846 SLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQ 905
Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFG-EEG-VEEMEKLMKSF 460
N I+ +G L +A++ T + +I ++ N EE V E EK + F
Sbjct: 906 NRITAKGTAQLARALQKNTAITEICLNGNLIKPEEAKVFENEKRIICF 953
Score = 151 (58.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/147 (25%), Positives = 73/147 (49%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+L K K + + + N I +G ++ +E + L+HL L N IT +G +
Sbjct: 747 VLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVAL 806
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
A+ S+ + + + GA + A+ L D+ +L ++L N IS +GG L +A+K
Sbjct: 807 AVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQ 866
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMK 147
T L I +++N+ +E E ++++
Sbjct: 867 NTTLTVIWLTKNELNDESAECFAEMLR 893
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 50/187 (26%), Positives = 86/187 (45%)
Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
C LS LH + LAL + N L + G + L F +L T+ R+ + N
Sbjct: 692 CSALSFVLHHFHRQ-------LALDL---DNNNLNDYGVQELQPCFSRL-TVIRLSV--N 738
Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
I G+ L + + K + L L +N IT GA + Q L + L L LG + S
Sbjct: 739 QITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLGKNRITS 798
Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
G +A + ++T++ DV + N+I +G +A+K+ L ++++ N EG +
Sbjct: 799 EGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNGISPEGGK 858
Query: 452 EMEKLMK 458
+ + +K
Sbjct: 859 SLAQALK 865
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+++ N + G+ L F +L + L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVQELQPCFS---RLTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLY 764
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ + GA +A+ L + L+ + L N I+ +GG + A+KN T + + + NQ
Sbjct: 765 NNQITDIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQI 824
Query: 135 GEEGVEEMEKLMKSFGMAAALVL 157
G+EG + + +K L L
Sbjct: 825 GDEGAKAFAEALKDHPSLTTLSL 847
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 34/133 (25%), Positives = 64/133 (48%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+ + N I G+ L + + K + L L +N IT GA + Q L + L L LG
Sbjct: 733 IRLSVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLG 792
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ S G +A + ++T++ DV + N+I +G +A+K+ L ++++ N
Sbjct: 793 KNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNGI 852
Query: 135 GEEGVEEMEKLMK 147
EG + + + +K
Sbjct: 853 SPEGGKSLAQALK 865
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 37/143 (25%), Positives = 65/143 (45%)
Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
+++ N + G+ L F L + L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVQELQPCFSR---LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLY 764
Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
+ + GA +A+ L + L+ + L N I+ +GG + A+KN T + + + NQ
Sbjct: 765 NNQITDIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQI 824
Query: 446 GEEGVEEMEKLMKSFGMAAALVL 468
G+EG + + +K L L
Sbjct: 825 GDEGAKAFAEALKDHPSLTTLSL 847
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 33/146 (22%), Positives = 73/146 (50%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A + + + L+H+++ +N I G ++ A + + + + + N I +GA +A
Sbjct: 776 VAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEA 835
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L PSL L+L + G S+A+ L NTTL + LT NE++ + + ++
Sbjct: 836 LKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLRVN 895
Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
L+ + + +N+ +G ++ + ++
Sbjct: 896 QTLRHLWLIQNRITAKGTAQLARALQ 921
Score = 120 (47.3 bits), Expect = 0.00079, P = 0.00079
Identities = 44/150 (29%), Positives = 71/150 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A K ++ V M N I G A ++A +++ L L+L N I+ +G L QA
Sbjct: 804 VALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNGISPEGGKSLAQA 863
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L + +L ++ L L A A+ L N TL + L N I+ +G L +A++
Sbjct: 864 LKQNTTLTVIWLTKNELNDESAECFAEMLRVNQTLRHLWLIQNRITAKGTAQLARALQKN 923
Query: 122 TKLKQINVSENQFG-EEG-VEEMEKLMKSF 149
T + +I ++ N EE V E EK + F
Sbjct: 924 TAITEICLNGNLIKPEEAKVFENEKRIICF 953
>RGD|1308314 [details] [associations]
symbol:Nlrp3 "NLR family, pyrin domain containing 3"
species:10116 "Rattus norvegicus" [GO:0002674 "negative regulation
of acute inflammatory response" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0006954 "inflammatory response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA;ISO] [GO:0032621 "interleukin-18 production"
evidence=IEA;ISO] [GO:0042347 "negative regulation of NF-kappaB
import into nucleus" evidence=IEA;ISO] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0050701 "interleukin-1
secretion" evidence=IEA;ISO] [GO:0050713 "negative regulation of
interleukin-1 beta secretion" evidence=ISO] [GO:0050718 "positive
regulation of interleukin-1 beta secretion" evidence=IEA;ISO]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA;ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=ISO] [GO:0072559 "NLRP3
inflammasome complex" evidence=IEA;ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:1308314 GO:GO:0005524 GO:GO:0050728
GO:GO:0006954 GO:GO:0051607 GO:GO:0006919 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347
GeneTree:ENSGT00700000104141 OrthoDB:EOG4HX508 GO:GO:0050701
GO:GO:0032621 InterPro:IPR003590 SMART:SM00368 OMA:VNCCLTS
IPI:IPI00198971 Ensembl:ENSRNOT00000004280 UCSC:RGD:1308314
ArrayExpress:D4A523 Uniprot:D4A523
Length = 1033
Score = 165 (63.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 64/241 (26%), Positives = 105/241 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + +LVELDLSDNA G GV L L+ C + C L S
Sbjct: 791 LSSSQKLVELDLSDNALGDFGVRLLCVGLKHLLC--------NLQKLWLVSCCLTSAC-- 840
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
C + + S +L G N L + G ++L K + L+++ + +G+ + +
Sbjct: 841 -CQDLALVLSSNHSLTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSLCCS 899
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIA 398
AL+ + N+NL HL L N + G L + L L +L L +C L S ++
Sbjct: 900 ALTSVLKTNQNLTHLYLRSNALGDMGLKLLCEGLLHPDCKLQMLELDNCSLTSHSCWDLS 959
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKLM 457
LT N +L +NL+ N++ + L + +K + L Q + + E E +E L
Sbjct: 960 TILTHNQSLRKLNLSNNDLGDLCVVTLCEVLKQQGCLLQSLQLGEMYLNCETKRTLEALQ 1019
Query: 458 K 458
+
Sbjct: 1020 E 1020
Score = 51 (23.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 53 KGAIPLGQALSKLPSLAIL---NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 109
+G+ PL Q P + L +C L S+ + L+ N +L +++L+ N +
Sbjct: 694 RGSQPLDQVQCVFPDPHVACSSRLVNCCLTSSFCRGLFSSLSTNQSLTELDLSDNTLGDP 753
Query: 110 GGLDLVKAMKN 120
G L +A+++
Sbjct: 754 GMRVLCEALQH 764
>UNIPROTKB|Q86W25 [details] [associations]
symbol:NLRP13 "NACHT, LRR and PYD domains-containing
protein 13" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 HOGENOM:HOG000294064
EMBL:AY154468 EMBL:BK001108 IPI:IPI00249591 RefSeq:NP_789780.2
UniGene:Hs.446924 ProteinModelPortal:Q86W25 SMR:Q86W25
PhosphoSite:Q86W25 DMDM:145559500 PaxDb:Q86W25 PRIDE:Q86W25
DNASU:126204 Ensembl:ENST00000342929 GeneID:126204 KEGG:hsa:126204
UCSC:uc010ygg.2 CTD:126204 GeneCards:GC19M056407 H-InvDB:HIX0040054
HGNC:HGNC:22937 MIM:609660 neXtProt:NX_Q86W25 PharmGKB:PA162397891
eggNOG:NOG146595 InParanoid:Q86W25 OMA:ENLHELD OrthoDB:EOG40VVNS
PhylomeDB:Q86W25 GenomeRNAi:126204 NextBio:81710 Bgee:Q86W25
CleanEx:HS_NLRP13 Genevestigator:Q86W25 GermOnline:ENSG00000173572
Uniprot:Q86W25
Length = 1043
Score = 152 (58.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 61/226 (26%), Positives = 105/226 (46%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L+ ++L L+ S N G + V + LR S C + C L + +
Sbjct: 778 LQGNSKLTHLNFSSNKLG-MTVPLILKALRHSAC--------NLKYLCLEKCNLSAASCQ 828
Query: 281 DC--YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVG 337
D + +S + + L L G NRL+++G K+L A K LER+E+ +
Sbjct: 829 DLALFLTSIQHVTRLCL-----GFNRLQDDGIKLLCAALTHPKCALERLELWFCQLAAPA 883
Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASS 396
LSDA +N++L HLNL+ N++ +G L +AL + +L LNL C G
Sbjct: 884 CKHLSDALLQNRSLTHLNLSKNSLRDEGVKFLCEALGRPDGNLQSLNLSGCSFTREGCGE 943
Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
+A L+ N ++ ++L N++ G L +A+K L + +++
Sbjct: 944 LANALSHNHNVKILDLGENDLQDDGVKLLCEALKPHRALHTLGLAK 989
Score = 129 (50.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 302 RNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
+N L +EG K L A+ + L+ + + G L++A N N++ L+L +N
Sbjct: 904 KNSLRDEGVKFLCEALGRPDGNLQSLNLSGCSFTREGCGELANALSHNHNVKILDLGEND 963
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
+ G L +AL +L L L C L +A + L+ + +L ++NL NE+
Sbjct: 964 LQDDGVKLLCEALKPHRALHTLGLAKCNLTTACCQHLFSVLSSSKSLVNLNLLGNELDTD 1023
Query: 421 GGLDLVKAMKNKT-KLKQI 438
G L KA+K T +L+++
Sbjct: 1024 GVKMLCKALKKSTCRLQKL 1042
Score = 117 (46.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 38/157 (24%), Positives = 74/157 (47%)
Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRHLNLNDNTIT 362
+L K L+ + ++L + + +N + G+ L +A + NL+ LNL+ + T
Sbjct: 878 QLAAPACKHLSDALLQNRSLTHLNLSKNSLRDEGVKFLCEALGRPDGNLQSLNLSGCSFT 937
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT-CNEISVQG 421
+G L ALS ++ IL+LG+ L+ G + + L + L + L CN ++
Sbjct: 938 REGCGELANALSHNHNVKILDLGENDLQDDGVKLLCEALKPHRALHTLGLAKCN-LTTAC 996
Query: 422 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L + + L +N+ N+ +GV+ + K +K
Sbjct: 997 CQHLFSVLSSSKSLVNLNLLGNELDTDGVKMLCKALK 1033
Score = 66 (28.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 33 AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 92
A + N KL HLN + N + + L +L L L C L +A +A +LT
Sbjct: 777 ALQGNSKLTHLNFSSNKLGMTVPLILKALRHSACNLKYLCLEKCNLSAASCQDLALFLTS 836
Query: 93 NTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINV 129
+ + L N + G L A+ + K L+++ +
Sbjct: 837 IQHVTRLCLGFNRLQDDGIKLLCAALTHPKCALERLEL 874
Score = 65 (27.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL-DLVKAMKNKTKLKQINV 129
L+L + L ++ + L N + LTC ++ + L DL+ A++ +KL +N
Sbjct: 731 LDLSNSKLHASSVKGLCLALK-NPRCKVQKLTCKSVTPEWVLQDLIIALQGNSKLTHLNF 789
Query: 130 SENQFG 135
S N+ G
Sbjct: 790 SSNKLG 795
Score = 48 (22.0 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
L T L ELDLS++ V+GL L++ C
Sbjct: 722 LVTNENLHELDLSNSKLHASSVKGLCLALKNPRC 755
Score = 42 (19.8 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 84 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQI 127
+SI L N L +++L+ +++ L A+KN + K++++
Sbjct: 716 NSICSTLVTNENLHELDLSNSKLHASSVKGLCLALKNPRCKVQKL 760
>UNIPROTKB|A7Z026 [details] [associations]
symbol:PPP1R37 "Protein phosphatase 1 regulatory subunit
37" species:9913 "Bos taurus" [GO:0019902 "phosphatase binding"
evidence=ISS] [GO:0010923 "negative regulation of phosphatase
activity" evidence=ISS] [GO:0004864 "protein phosphatase inhibitor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0004864 GO:GO:0010923 GO:GO:0019902
GeneTree:ENSGT00640000091171 EMBL:BC153224 IPI:IPI00690419
RefSeq:NP_001098849.1 UniGene:Bt.62290 ProteinModelPortal:A7Z026
Ensembl:ENSBTAT00000025071 GeneID:516932 KEGG:bta:516932 CTD:284352
eggNOG:NOG259751 HOGENOM:HOG000074153 HOVERGEN:HBG108102
InParanoid:A7Z026 OMA:GMTLPHT OrthoDB:EOG4SJ5DQ NextBio:20872337
Uniprot:A7Z026
Length = 699
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 44/188 (23%), Positives = 87/188 (46%)
Query: 284 ESSKKEGSPL-----ALKVFIAGR------NRLEN-EGAKMLAAVFKKLKTLERVEMPQN 331
ESS G PL ALK+ + R N+L + + L + K +L+ +++ N
Sbjct: 227 ESSSLSGRPLMLLATALKMNMTLRELYLADNKLNGLQDSAQLGNLLKFNCSLQILDLRNN 286
Query: 332 GIYHVGITALSDAF-EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
+ G+ + + E+ K L L L +N +T+ G LG L SL LNLG +
Sbjct: 287 HVLDSGLAYICEGLKEQRKGLATLVLWNNQLTHTGMAFLGMTLPHTHSLETLNLGHNPIG 346
Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
+ G ++ L N ++ + L +++ +G + + + + +L ++++ EN+ G+
Sbjct: 347 NEGVRNLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGL 406
Query: 451 EEMEKLMK 458
+ +K
Sbjct: 407 MALSLALK 414
Score = 115 (45.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 60/262 (22%), Positives = 111/262 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEG-LADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK L EL L+DN + L +LL+ +C + +L L
Sbjct: 243 LKMNMTLRELYLADNKLNGLQDSAQLGNLLKFNCSLQILD---------LRNNHVLDSGL 293
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
E K++ LA + N+L + G L +LE + + N I + G+
Sbjct: 294 AYICEGLKEQRKGLA--TLVLWNNQLTHTGMAFLGMTLPHTHSLETLNLGHNPIGNEGVR 351
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
L + N+++ L L +T +GA+ + + +++ P L L+L + +K+ G +++
Sbjct: 352 NLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSL 411
Query: 400 YLTDNTTLE--DVNLTCNEISVQGGLDLVKAM----KNKTKLKQINVSENQFGEEGVEEM 453
L N +L D++ + +V+ ++ KA+ +N K + V E + E+
Sbjct: 412 ALKVNHSLLRLDLDREPKKEAVKSFIETQKALLAEIQNGCKRNFVLVRERE------EKE 465
Query: 454 EKLMKSFGMAAALVLE---DDE 472
++L S M V E DDE
Sbjct: 466 QRLQLSASMPEITVTEPQPDDE 487
Score = 100 (40.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 36/148 (24%), Positives = 72/148 (48%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNT-ITYKGAIPLGQ 60
L VFK+L+ + V++ Q + G +AL D E + HLN++ N I +G
Sbjct: 127 LEEVFKRLQ-FKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAH 185
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ K L L+ + L A +A+ L ++L ++L + +S + + L A+K
Sbjct: 186 MMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLESSSLSGRPLMLLATALKM 245
Query: 121 KTKLKQINVSENQF-GEEGVEEMEKLMK 147
L+++ +++N+ G + ++ L+K
Sbjct: 246 NMTLRELYLADNKLNGLQDSAQLGNLLK 273
>MGI|MGI:98640 [details] [associations]
symbol:Tcte1 "t-complex-associated testis expressed 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:98640
GeneTree:ENSGT00640000091171 UniGene:Mm.329064 EMBL:M28821
EMBL:BC145741 IPI:IPI01008396 PIR:A45841 PIR:A45878
RefSeq:NP_038716.2 ProteinModelPortal:A6H639 SMR:A6H639
STRING:A6H639 PhosphoSite:A6H639 PRIDE:A6H639
Ensembl:ENSMUST00000113547 GeneID:21645 KEGG:mmu:21645
UCSC:uc008cqt.1 CTD:202500 eggNOG:NOG258271 HOGENOM:HOG000007147
HOVERGEN:HBG056299 OMA:GSWKRMF ChiTaRS:TCTE1 NextBio:300902
Bgee:A6H639 Genevestigator:A6H639 Uniprot:A6H639
Length = 498
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 46/144 (31%), Positives = 72/144 (50%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 353
AL+ N + + GA+ A + + L + + N + G +L+ A N NL
Sbjct: 306 ALEELDLSHNLIGDRGARAAAKLLSHSR-LRVLNLANNQLQAPGAQSLAHALAHNTNLVF 364
Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
LNL N I +G + AL L++L+LG L A+ +++ LT NTTL +NL+
Sbjct: 365 LNLRLNCIEDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLS 424
Query: 414 CNEISVQGGLDLVKAMK-NKTKLK 436
CN I GG L++ + NKT L+
Sbjct: 425 CNHIGQDGGKQLLEGISDNKTILE 448
Score = 154 (59.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
DCY + + LK+F R++++++ A++L LE +++ N I G A
Sbjct: 265 DCYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARA 324
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
+ ++ LR LNL +N + GA L AL+ +L LNL ++ G +IA
Sbjct: 325 AAKLLSHSR-LRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHA 383
Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
L N L ++L N++S L + + T L +N+S N G++G +++
Sbjct: 384 LETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQL 436
Score = 146 (56.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
L + + N + G +L+ A N L LNL N I +G + AL L++L
Sbjct: 334 LRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETNKCLSVL 393
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLK 125
+LG L A+ +++ LT NTTL +NL+CN I GG L++ + NKT L+
Sbjct: 394 HLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKTILE 448
Score = 125 (49.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LAA K TL+ ++ ++ + L + ++ L L+L+ N I +GA +
Sbjct: 269 LAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKL 328
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
LS L +LNL + L++ GA S+A L NT L +NL N I +GG + A++
Sbjct: 329 LSH-SRLRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETN 387
Query: 122 TKLKQINVSENQFGE 136
L +++ N+ E
Sbjct: 388 KCLSVLHLGGNKLSE 402
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
LE +++ N I G A + ++ LR LNL +N + GA L AL+ +L L
Sbjct: 307 LEELDLSHNLIGDRGARAAAKLLSHSR-LRVLNLANNQLQAPGAQSLAHALAHNTNLVFL 365
Query: 72 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
NL ++ G +IA L N L ++L N++S L + + T L +N+S
Sbjct: 366 NLRLNCIEDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSC 425
Query: 132 NQFGEEGVEEM 142
N G++G +++
Sbjct: 426 NHIGQDGGKQL 436
Score = 111 (44.1 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 38/152 (25%), Positives = 70/152 (46%)
Query: 295 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 354
L+V N+L+ GA+ LA L + + N I G A++ A E NK L L
Sbjct: 334 LRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETNKCLSVL 393
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
+L N ++ A L Q L+ +L LNL + G + + ++DN T+ + +L
Sbjct: 394 HLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKTILEFDLRL 453
Query: 415 NEISVQGGLDLVKAMK-NKTKLKQINVSENQF 445
+++S + + + + N+ +Q ++ F
Sbjct: 454 SDVSQESEYLIGQVLHANREAARQRTLNPGHF 485
Score = 77 (32.2 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 21/92 (22%), Positives = 43/92 (46%)
Query: 51 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 110
TY+ L + +L I L + A + + L D+ LE+++L+ N I +G
Sbjct: 262 TYRDCYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRG 321
Query: 111 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
K + + ++L+ +N++ NQ G + +
Sbjct: 322 ARAAAKLLSH-SRLRVLNLANNQLQAPGAQSL 352
Score = 57 (25.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 14/62 (22%), Positives = 32/62 (51%)
Query: 85 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 144
S+A + TL+ LT +++ L++++ + L+++++S N G+ G K
Sbjct: 268 SLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAK 327
Query: 145 LM 146
L+
Sbjct: 328 LL 329
Score = 49 (22.3 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 13/26 (50%), Positives = 13/26 (50%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSS 252
L ELDLS N G G A LL S
Sbjct: 307 LEELDLSHNLIGDRGARAAAKLLSHS 332
>UNIPROTKB|Q647I9 [details] [associations]
symbol:NLRP5 "NACHT, LRR and PYD domains-containing protein
5" species:9913 "Bos taurus" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0017111
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 HOGENOM:HOG000294064 HOVERGEN:HBG063656 HSSP:P10775
EMBL:AY721594 IPI:IPI00685152 RefSeq:NP_001007815.1
UniGene:Bt.36110 ProteinModelPortal:Q647I9 STRING:Q647I9
PRIDE:Q647I9 GeneID:493717 KEGG:bta:493717 CTD:126206
eggNOG:NOG147585 InParanoid:Q647I9 OrthoDB:EOG44XJG0
NextBio:20865463 Uniprot:Q647I9
Length = 1098
Score = 121 (47.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 58/251 (23%), Positives = 106/251 (42%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L L LS + G G+ L ++ S C + GC L+ AL
Sbjct: 852 LTHLSLSGDELGSKGMSLLCRAVKLSSC-GLQKLALNACSLDVAGCGFLAFAL-----MG 905
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAF 345
+ + L+L + N LE+ G +L V + L +++ + +LS+
Sbjct: 906 NRHLTHLSLSM-----NPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVI 960
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+ LR L+L N + +G L + L + +L L L C L S G +++ LT +
Sbjct: 961 TRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSR 1020
Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEG---VEEMEKLMKSFG 461
L +NL N++ +G L A + T L+ I + + Q+ +E++++L
Sbjct: 1021 HLASLNLMRNDLGPRGMTTLCSAFMHPTSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVV 1080
Query: 462 MAAALVLEDDE 472
++ A E++E
Sbjct: 1081 ISDAWYTEEEE 1091
Score = 121 (47.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 56/255 (21%), Positives = 111/255 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L T L L L+ N GV+ L D L+ + C T C+ L+ AL
Sbjct: 789 LATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGSCGLTAAT-CQDLASALI 847
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
+ +G + ++G + L ++G +L K L+++ + + G
Sbjct: 848 E------NQG---LTHLSLSG-DELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCG 897
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSI 397
L+ A N++L HL+L+ N + G L + + + PS + L+L +C L ++ S+
Sbjct: 898 FLAFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMME-PSCPLRDLDLVNCRLTASCCKSL 956
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
+ +T + L ++L N + +G L + +K K L ++ + EG + + +
Sbjct: 957 SNVITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAAL 1016
Query: 458 K-SFGMAAALVLEDD 471
S +A+ ++ +D
Sbjct: 1017 TCSRHLASLNLMRND 1031
Score = 97 (39.2 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAI 70
LE + + + G+ +S + L+ L+L N + +G L AL P +L
Sbjct: 767 LESLRLDRCGLTPASCREISQVLATSGSLKSLSLTGNKVADQGVKSLCDALKVTPCTLQK 826
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
L LG C L +A +A L +N L ++L+ +E+ +G L +A+K
Sbjct: 827 LILGSCGLTAATCQDLASALIENQGLTHLSLSGDELGSKGMSLLCRAVK 875
Score = 69 (29.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 21 GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLL 78
G+ H+ +T + N+ + L+L + + +AL + P A+ L L C L
Sbjct: 724 GLRHLWMTLII-----NRNITRLDLTGCRLREEDVQTACEAL-RHPQCALESLRLDRCGL 777
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
A I++ L + +L+ ++LT N+++ QG L A+K
Sbjct: 778 TPASCREISQVLATSGSLKSLSLTGNKVADQGVKSLCDALK 818
Score = 46 (21.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 14/78 (17%), Positives = 35/78 (44%)
Query: 71 LNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+L C L+ + + L LE + L ++ ++ + + LK +++
Sbjct: 741 LDLTGCRLREEDVQTACEALRHPQCALESLRLDRCGLTPASCREISQVLATSGSLKSLSL 800
Query: 130 SENQFGEEGVEEMEKLMK 147
+ N+ ++GV+ + +K
Sbjct: 801 TGNKVADQGVKSLCDALK 818
>UNIPROTKB|F1MT67 [details] [associations]
symbol:NLRP5 "NACHT, LRR and PYD domains-containing protein
5" species:9913 "Bos taurus" [GO:0045179 "apical cortex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0043487 "regulation of RNA stability"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0043234 GO:GO:0005730 GO:GO:0001701
GO:GO:0009566 GO:GO:0009887 GO:GO:0045179 GO:GO:0031647
GO:GO:0017111 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
GO:GO:0043623 GO:GO:0007566 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0043487 GeneTree:ENSGT00700000104427 IPI:IPI00685152
UniGene:Bt.36110 OMA:SQAMEQE EMBL:DAAA02047829 EMBL:DAAA02047828
ProteinModelPortal:F1MT67 Ensembl:ENSBTAT00000017623 Uniprot:F1MT67
Length = 1098
Score = 121 (47.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 58/251 (23%), Positives = 106/251 (42%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L L LS + G G+ L ++ S C + GC L+ AL
Sbjct: 852 LTHLSLSGDELGSKGMSLLCRAVKLSSC-GLQKLALNACSLDVAGCGFLAFAL-----MG 905
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAF 345
+ + L+L + N LE+ G +L V + L +++ + +LS+
Sbjct: 906 NRHLTHLSLSM-----NPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLSNVI 960
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+ LR L+L N + +G L + L + +L L L C L S G +++ LT +
Sbjct: 961 TRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALTCSR 1020
Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEG---VEEMEKLMKSFG 461
L +NL N++ +G L A + T L+ I + + Q+ +E++++L
Sbjct: 1021 HLASLNLMRNDLGPRGMTTLCSAFMHPTSNLQTIGLWKEQYPARVRRLLEQVQRLKPHVV 1080
Query: 462 MAAALVLEDDE 472
++ A E++E
Sbjct: 1081 ISDAWYTEEEE 1091
Score = 118 (46.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 56/255 (21%), Positives = 111/255 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L T L L L+ N GV+ L D L+ + C T C+ L+ AL
Sbjct: 789 LATSGSLKSLSLTGNKVVDQGVKSLCDALKVTPCTLQKLILGSCGLTAAT-CQDLASALI 847
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
+ +G + ++G + L ++G +L K L+++ + + G
Sbjct: 848 E------NQG---LTHLSLSG-DELGSKGMSLLCRAVKLSSCGLQKLALNACSLDVAGCG 897
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSI 397
L+ A N++L HL+L+ N + G L + + + PS + L+L +C L ++ S+
Sbjct: 898 FLAFALMGNRHLTHLSLSMNPLEDPGMNLLCEVMME-PSCPLRDLDLVNCRLTASCCKSL 956
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
+ +T + L ++L N + +G L + +K K L ++ + EG + + +
Sbjct: 957 SNVITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAAL 1016
Query: 458 K-SFGMAAALVLEDD 471
S +A+ ++ +D
Sbjct: 1017 TCSRHLASLNLMRND 1031
Score = 97 (39.2 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAI 70
LE + + + G+ +S + L+ L+L N + +G L AL P +L
Sbjct: 767 LESLRLDRCGLTPASCREISQVLATSGSLKSLSLTGNKVVDQGVKSLCDALKVTPCTLQK 826
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
L LG C L +A +A L +N L ++L+ +E+ +G L +A+K
Sbjct: 827 LILGSCGLTAATCQDLASALIENQGLTHLSLSGDELGSKGMSLLCRAVK 875
Score = 66 (28.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 21 GIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLL 78
G+ H+ +T + N+ + L+L + + +AL + P A+ L L C L
Sbjct: 724 GLRHLWMTLII-----NRNITRLDLTGCRLREEDVQTACEAL-RHPQCALESLRLDRCGL 777
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
A I++ L + +L+ ++LT N++ QG L A+K
Sbjct: 778 TPASCREISQVLATSGSLKSLSLTGNKVVDQGVKSLCDALK 818
>UNIPROTKB|F1RTQ8 [details] [associations]
symbol:LRRC16A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046415 "urate metabolic process" evidence=IEA]
[GO:0031529 "ruffle organization" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0016477
GO:GO:0030027 GO:GO:0046415 GO:GO:0030032 GO:GO:0031529 OMA:TLIVWLS
GeneTree:ENSGT00390000014487 EMBL:CU019580 EMBL:CU326397
Ensembl:ENSSSCT00000001196 Uniprot:F1RTQ8
Length = 1332
Score = 117 (46.2 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL--NDNTIT 362
L + GA++L ++ + +++ NG+ ++ L +N++++HL L N N +
Sbjct: 428 LRSGGAQVLEGCIAEIHNITSLDISDNGL-ESDLSTLIVWLSKNRSIQHLALGKNFNNMK 486
Query: 363 YKGAIP----LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
K P L Q + S L L+L D LK+ + I L NT+L V+++ N +
Sbjct: 487 SKNLTPVLDNLVQMIQDEESPLQSLSLADSKLKTE-VTIIINALGSNTSLTKVDISGNGM 545
Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
G L KA++ TKL+ + +N +G +++ M+
Sbjct: 546 GDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAME 586
Score = 103 (41.3 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 42/154 (27%), Positives = 75/154 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLP---- 66
L + + N + G++ALS F + K L+HLNL+ +++ KG L Q+LS P
Sbjct: 240 LHTINLAGNPLEDRGVSALSIQFAKLPKGLKHLNLSKTSVSPKGVNSLFQSLSANPLTAT 299
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV--KAMKNKTK- 123
+L L+L +L+ SS+ +L + ++L+ E S LD+V ++ +
Sbjct: 300 TLIHLDLSGNILRGDDLSSMYSFLAQPNAIAHLDLSNTECS----LDMVCGALLRGCLQY 355
Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
L +N+S F +E+ K F +++L L
Sbjct: 356 LAVLNLSRTVFSHRKGKEVPPSFKQF-FSSSLAL 388
Score = 80 (33.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+E L+ L+L D+ + + I + AL SL +++ + GA +AK L NT
Sbjct: 503 DEESPLQSLSLADSKLKTEVTIIIN-ALGSNTSLTKVDISGNGMGDMGAKMLAKALQINT 561
Query: 406 TLEDVNLTCNEISVQGGLDLVKAM-KNKT 433
L V N I+ QG D+ AM KN T
Sbjct: 562 KLRTVIWDKNNITAQGFQDIAVAMEKNYT 590
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
K L+ L + + + E SPL + +A ++L+ E ++ A+ +L +V++ NG
Sbjct: 488 KNLTPVLDNLVQMIQDEESPLQ-SLSLAD-SKLKTEVTIIINALGSNT-SLTKVDISGNG 544
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
+ +G L+ A + N LR + + N IT +G + A+ K
Sbjct: 545 MGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEK 587
Score = 71 (30.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 37/142 (26%), Positives = 64/142 (45%)
Query: 290 GSPLAL-KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
GS +L KV I+G N + + GAKMLA + L V +N I G ++ A E+N
Sbjct: 530 GSNTSLTKVDISG-NGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKN 588
Query: 349 KNLRHLNLN--DNTITYK-GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
LR + + D + K +AL K+ + + N A + + + +T
Sbjct: 589 YTLRFMPIPMYDASQALKTNPEKTEEALQKIENYLLRNHETRKYLQEQAYRLQQGIVTST 648
Query: 406 TLEDVNLTCNEISVQGGLDLVK 427
T + ++ C + VQ L+ ++
Sbjct: 649 TQQMIDRIC--VKVQDHLNSLR 668
Score = 66 (28.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 33 AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLT 91
A N L +NL N + +G L +KLP L LNL + G +S+ + L+
Sbjct: 233 AHNPNSGLHTINLAGNPLEDRGVSALSIQFAKLPKGLKHLNLSKTSVSPKGVNSLFQSLS 292
Query: 92 DN----TTLEDVNLTCN 104
N TTL ++L+ N
Sbjct: 293 ANPLTATTLIHLDLSGN 309
Score = 59 (25.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 34/152 (22%), Positives = 67/152 (44%)
Query: 2 LAAVFKKL-KTLEHVEMPQNGIYHVGITALSDAFEENK----KLRHLNLNDNTITYKGAI 56
L+ F KL K L+H+ + + + G+ +L + N L HL+L+ N +
Sbjct: 258 LSIQFAKLPKGLKHLNLSKTSVSPKGVNSLFQSLSANPLTATTLIHLDLSGNILRGDDLS 317
Query: 57 PLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
+ L++ ++A L+L +C L + + L L +NL+ S + G ++
Sbjct: 318 SMYSFLAQPNAIAHLDLSNTECSLDMVCGALLRGCLQ---YLAVLNLSRTVFSHRKGKEV 374
Query: 115 VKAMK----NKTKLKQINVSENQFGEEGVEEM 142
+ K + L QIN+S + E ++ +
Sbjct: 375 PPSFKQFFSSSLALMQINLSGTKLSPEPLKAL 406
>UNIPROTKB|O75864 [details] [associations]
symbol:PPP1R37 "Protein phosphatase 1 regulatory subunit
37" species:9606 "Homo sapiens" [GO:0004864 "protein phosphatase
inhibitor activity" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=IDA] [GO:0010923 "negative regulation of phosphatase
activity" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0004864 GO:GO:0010923 GO:GO:0019902 EMBL:AC011489
EMBL:AC005757 CTD:284352 eggNOG:NOG259751 HOGENOM:HOG000074153
HOVERGEN:HBG108102 OMA:GMTLPHT OrthoDB:EOG4SJ5DQ EMBL:AB075866
EMBL:BC035704 EMBL:BQ638089 IPI:IPI00290511 IPI:IPI00885097
RefSeq:NP_061994.1 UniGene:Hs.285363 ProteinModelPortal:O75864
SMR:O75864 IntAct:O75864 MINT:MINT-1193517 PhosphoSite:O75864
PRIDE:O75864 Ensembl:ENST00000221462 GeneID:284352 KEGG:hsa:284352
UCSC:uc002pat.3 GeneCards:GC19P045597 H-InvDB:HIX0015224
HGNC:HGNC:27607 HPA:HPA041500 neXtProt:NX_O75864 GenomeRNAi:284352
NextBio:94764 ArrayExpress:O75864 Bgee:O75864 CleanEx:HS_LRRC68
Genevestigator:O75864 Uniprot:O75864
Length = 691
Score = 115 (45.5 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 35/165 (21%), Positives = 79/165 (47%)
Query: 296 KVFIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRH 353
++++A N+L + + L + K +L+ +++ N + G+ + + E+ K L
Sbjct: 251 ELYLAD-NKLNGLQDSAQLGNLLKFNCSLQILDLRNNHVLDSGLAYICEGLKEQRKGLVT 309
Query: 354 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 413
L L +N +T+ G LG L SL LNLG + + G + L N ++ + L
Sbjct: 310 LVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGVRHLKNGLISNRSVLRLGLA 369
Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+++ +G + + + + +L ++++ EN+ G+ + +K
Sbjct: 370 STKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALK 414
Score = 109 (43.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 43/193 (22%), Positives = 83/193 (43%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEG-LADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK L EL L+DN + L +LL+ +C + +L L
Sbjct: 243 LKMNMNLRELYLADNKLNGLQDSAQLGNLLKFNCSLQILD---------LRNNHVLDSGL 293
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 339
E K++ L + N+L + G L ++LE + + N I + G+
Sbjct: 294 AYICEGLKEQRKGLV--TLVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGVR 351
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
L + N+++ L L +T +GA+ + + +++ P L L+L + +K+ G +++
Sbjct: 352 HLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSL 411
Query: 400 YLTDNTTLEDVNL 412
L N +L ++L
Sbjct: 412 ALKVNHSLLRLDL 424
Score = 106 (42.4 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 39/167 (23%), Positives = 75/167 (44%)
Query: 294 ALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
+L++ N + + G + K+ K L + + N + H G+ L ++L
Sbjct: 277 SLQILDLRNNHVLDSGLAYICEGLKEQRKGLVTLVLWNNQLTHTGMAFLGMTLPHTQSLE 336
Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
LNL N I +G L L S+ L L L GA ++A+++ ++ L ++L
Sbjct: 337 TLNLGHNPIGNEGVRHLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDL 396
Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
NEI G + L A+K L ++++ + + +E V+ + K+
Sbjct: 397 RENEIKTGGLMALSLALKVNHSLLRLDL-DREPKKEAVKSFIETQKA 442
Score = 96 (38.9 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 36/148 (24%), Positives = 71/148 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNT-ITYKGAIPLGQ 60
L VFK+L+ + V++ Q + G +AL D E + HLN++ N I +G
Sbjct: 127 LEEVFKRLQ-FKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAH 185
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ K L L+ + L A +A+ L ++L ++L +S + + L A+K
Sbjct: 186 MMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKM 245
Query: 121 KTKLKQINVSENQF-GEEGVEEMEKLMK 147
L+++ +++N+ G + ++ L+K
Sbjct: 246 NMNLRELYLADNKLNGLQDSAQLGNLLK 273
Score = 67 (28.6 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 3 AAVFKKLKTLE---HVEMPQNGIYHVGITALSDAFEENKK---LRHLNLNDNTITYKGAI 56
+A+F ++ E H+ + N H+G A +K L++L+ + + A
Sbjct: 152 SALFDMIEYYESATHLNISFNK--HIGTRGWQAAAHMMRKTSCLQYLDARNTPLLDHSAP 209
Query: 57 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS-VQGGLDLV 115
+ +AL SLA+L+L + L +A L N L ++ L N+++ +Q L
Sbjct: 210 FVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMNLRELYLADNKLNGLQDSAQLG 269
Query: 116 KAMKNKTKLKQINVSENQFGEEGV 139
+K L+ +++ N + G+
Sbjct: 270 NLLKFNCSLQILDLRNNHVLDSGL 293
>MGI|MGI:1915982 [details] [associations]
symbol:Lrrc16a "leucine rich repeat containing 16A"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030027
"lamellipodium" evidence=ISO] [GO:0030032 "lamellipodium assembly"
evidence=ISO] [GO:0031529 "ruffle organization" evidence=ISO]
[GO:0046415 "urate metabolic process" evidence=ISO] MGI:MGI:1915982
GO:GO:0005634 GO:GO:0005737 GO:GO:0016477 GO:GO:0030027
GO:GO:0046415 GO:GO:0030032 GO:GO:0031529 PDB:2KZ7 PDB:3AA0
PDB:3AAE PDBsum:2KZ7 PDBsum:3AA0 PDBsum:3AAE eggNOG:NOG239526
EMBL:AL606464 CTD:55604 HOGENOM:HOG000230565 HOVERGEN:HBG108094
OMA:TLIVWLS OrthoDB:EOG4GTKC4 ChiTaRS:LRRC16A EMBL:AY437876
EMBL:AK051570 EMBL:AK043591 EMBL:AL590864 EMBL:AL683873
EMBL:BC012229 IPI:IPI00460032 IPI:IPI00474873 IPI:IPI00987036
RefSeq:NP_081101.3 UniGene:Mm.211047 ProteinModelPortal:Q6EDY6
SMR:Q6EDY6 DIP:DIP-58942N STRING:Q6EDY6 PaxDb:Q6EDY6 PRIDE:Q6EDY6
DNASU:68732 Ensembl:ENSMUST00000072889 GeneID:68732 KEGG:mmu:68732
UCSC:uc007pvn.1 UCSC:uc007pvp.1 GeneTree:ENSGT00390000014487
InParanoid:Q6EDY6 EvolutionaryTrace:Q6EDY6 NextBio:327798
Bgee:Q6EDY6 CleanEx:MM_LRRC16A Genevestigator:Q6EDY6 Uniprot:Q6EDY6
Length = 1374
Score = 119 (46.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 42/161 (26%), Positives = 78/161 (48%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL--NDNTIT 362
L + GA++L ++ + +++ NG+ ++ L +N++++HL L N N +
Sbjct: 470 LRSGGAQVLEGCIAEIHNITSLDISDNGL-ESDLSTLIVWLSKNRSIQHLALGKNFNNMK 528
Query: 363 YKGAIP----LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
K P L Q + S L L+L D LK A + I L NT+L V+++ N +
Sbjct: 529 SKNLTPVLDNLVQMIQDEDSPLQSLSLADSKLK-AEVTIIINALGSNTSLTKVDISGNGM 587
Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
G L KA++ TKL+ + +N +G +++ M+
Sbjct: 588 GDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAME 628
Score = 97 (39.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 38/152 (25%), Positives = 74/152 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLP---- 66
L + + N + G+++LS F + K L+HLNL+ +++ KG L Q+LS P
Sbjct: 278 LHTINLAGNSLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTAS 337
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
+L L+L L+ S + +L T+ ++L+ E S++ + ++ + L
Sbjct: 338 TLTHLDLSGNALRGDDLSHMYNFLAQPNTIVHLDLSNTECSLE--MVCSALLRGCLQCLA 395
Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
+N+S + F +E+ K F +++L L
Sbjct: 396 VLNLSRSVFSHRKGKEVPPSFKQF-FSSSLAL 426
Score = 81 (33.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+E+ L+ L+L D+ + + I + AL SL +++ + GA +AK L NT
Sbjct: 545 DEDSPLQSLSLADSKLKAEVTIIIN-ALGSNTSLTKVDISGNGMGDMGAKMLAKALQINT 603
Query: 406 TLEDVNLTCNEISVQGGLDLVKAM-KNKT 433
L V N I+ QG D+ AM KN T
Sbjct: 604 KLRTVIWDKNNITAQGFQDIAVAMEKNYT 632
Score = 74 (31.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 38/143 (26%), Positives = 64/143 (44%)
Query: 290 GSPLAL-KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
GS +L KV I+G N + + GAKMLA + L V +N I G ++ A E+N
Sbjct: 572 GSNTSLTKVDISG-NGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKN 630
Query: 349 KNLRHLNLN--DNTITYK-GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
LR + + D K +AL K+ + + N A + + + +T
Sbjct: 631 YTLRFMPIPMYDAAQALKTNPEKTEEALQKIENYLLRNHETRKYLQEQAYRLQQGIVTST 690
Query: 406 TLEDVNLTCNEISVQGGLDLVKA 428
T + ++ C + VQ L+ ++A
Sbjct: 691 TQQMIDRIC--VKVQDHLNSLRA 711
Score = 72 (30.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 33 AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLT 91
A N L +NL N++ +G L +KLP L LNL L G +S+ + L+
Sbjct: 271 AHNPNSGLHTINLAGNSLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLS 330
Query: 92 DN----TTLEDVNLTCNEI 106
N +TL ++L+ N +
Sbjct: 331 ANPLTASTLTHLDLSGNAL 349
Score = 61 (26.5 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 33/152 (21%), Positives = 69/152 (45%)
Query: 2 LAAVFKKL-KTLEHVEMPQNGIYHVGITALSDAFEEN----KKLRHLNLNDNTITYKGAI 56
L+ F KL K L+H+ + + + G+ +L + N L HL+L+ N +
Sbjct: 296 LSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNALRGDDLS 355
Query: 57 PLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
+ L++ ++ L+L +C L+ ++ + L L +NL+ + S + G ++
Sbjct: 356 HMYNFLAQPNTIVHLDLSNTECSLEMVCSALLRGCLQ---CLAVLNLSRSVFSHRKGKEV 412
Query: 115 VKAMK----NKTKLKQINVSENQFGEEGVEEM 142
+ K + L QIN+S + E ++ +
Sbjct: 413 PPSFKQFFSSSLALIQINLSGTKLSPEPLKAL 444
>RGD|1306623 [details] [associations]
symbol:Lrrc16a "leucine rich repeat containing 16A"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016477
"cell migration" evidence=ISO] [GO:0030027 "lamellipodium"
evidence=ISO] [GO:0030032 "lamellipodium assembly" evidence=ISO]
[GO:0031529 "ruffle organization" evidence=ISO] [GO:0046415 "urate
metabolic process" evidence=ISO] RGD:1306623
GeneTree:ENSGT00390000014487 IPI:IPI00366327 PRIDE:F1M0N7
Ensembl:ENSRNOT00000059510 ArrayExpress:F1M0N7 Uniprot:F1M0N7
Length = 1296
Score = 118 (46.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL--NDNTIT 362
L + GA++L ++ + +++ NG+ ++ L N++++HL L N N +
Sbjct: 424 LRSGGAQVLEGCIAEIHNITSLDISDNGL-ESDLSTLIVWLSRNRSIQHLALGKNFNNMK 482
Query: 363 YKGAIP----LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
K P L Q + S L L+L D LK+ + I L NT+L V+++ N +
Sbjct: 483 SKNLTPVLDNLVQMIQDEDSPLQSLSLADSKLKTE-VTIIINALGSNTSLTKVDISGNSM 541
Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
G L KA++ TKL+ + +N +G +++ M+
Sbjct: 542 GDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAME 582
Score = 97 (39.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 38/152 (25%), Positives = 75/152 (49%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLP---- 66
L + + N + G+++LS F + K L+HLNL+ +++ KG L Q+LS P
Sbjct: 232 LHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTAS 291
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
+L L+L +L+ S + +L T+ ++L+ E S++ + ++ + L
Sbjct: 292 TLTHLDLSGNVLRGDDLSHMYNFLAQPNTIVHLDLSNTECSLE--MVCSALLRGCLQCLA 349
Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
+N+S + F +E+ K F +++L L
Sbjct: 350 VLNLSRSVFSHRKGKEVPPSFKQF-FSSSLAL 380
Score = 83 (34.3 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+E+ L+ L+L D+ + + I + AL SL +++ + GA +AK L NT
Sbjct: 499 DEDSPLQSLSLADSKLKTEVTIIIN-ALGSNTSLTKVDISGNSMGDMGAKMLAKALQINT 557
Query: 406 TLEDVNLTCNEISVQGGLDLVKAM-KNKT 433
L V N I+ QG D+ AM KN T
Sbjct: 558 KLRTVIWDKNNITAQGFQDIAVAMEKNYT 586
Score = 76 (31.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 38/143 (26%), Positives = 66/143 (46%)
Query: 290 GSPLAL-KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
GS +L KV I+G N + + GAKMLA + L V +N I G ++ A E+N
Sbjct: 526 GSNTSLTKVDISG-NSMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKN 584
Query: 349 KNLRHLNLN--DNTITYKGAIP-LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
LR + + D + K + +AL K+ + + N A + + + +T
Sbjct: 585 YTLRFMPIPMYDASQALKTSPEKTEEALQKIENYLLRNHETRKYLQEQAYRLQQGIVTST 644
Query: 406 TLEDVNLTCNEISVQGGLDLVKA 428
T + ++ C + VQ L+ ++A
Sbjct: 645 TQQMIDRIC--VKVQDHLNSLRA 665
Score = 69 (29.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 33 AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLT 91
A N L +NL N + +G L +KLP L LNL L G +S+ + L+
Sbjct: 225 AHNPNSGLHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLS 284
Query: 92 DN----TTLEDVNLTCN 104
N +TL ++L+ N
Sbjct: 285 ANPLTASTLTHLDLSGN 301
Score = 61 (26.5 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 33/152 (21%), Positives = 69/152 (45%)
Query: 2 LAAVFKKL-KTLEHVEMPQNGIYHVGITALSDAFEEN----KKLRHLNLNDNTITYKGAI 56
L+ F KL K L+H+ + + + G+ +L + N L HL+L+ N +
Sbjct: 250 LSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNVLRGDDLS 309
Query: 57 PLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
+ L++ ++ L+L +C L+ ++ + L L +NL+ + S + G ++
Sbjct: 310 HMYNFLAQPNTIVHLDLSNTECSLEMVCSALLRGCLQ---CLAVLNLSRSVFSHRKGKEV 366
Query: 115 VKAMK----NKTKLKQINVSENQFGEEGVEEM 142
+ K + L QIN+S + E ++ +
Sbjct: 367 PPSFKQFFSSSLALIQINLSGTKLSPEPLKAL 398
>UNIPROTKB|F1NYZ9 [details] [associations]
symbol:F1NYZ9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0043549 "regulation of kinase activity"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045345 "positive regulation of MHC class I biosynthetic
process" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0060335
"positive regulation of interferon-gamma-mediated signaling
pathway" evidence=IEA] [GO:0060339 "negative regulation of type I
interferon-mediated signaling pathway" evidence=IEA] [GO:0060340
"positive regulation of type I interferon-mediated signaling
pathway" evidence=IEA] GO:GO:0005829 GO:GO:0005634 GO:GO:0045944
GO:GO:0045087 GO:GO:0032088 GO:GO:0000979 GO:GO:0043549
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0045345 GO:GO:0060339
GO:GO:0060340 GO:GO:0060335 OMA:EILLSWN
GeneTree:ENSGT00660000095240 EMBL:AADN02065764 IPI:IPI00597693
Ensembl:ENSGALT00000001908 Uniprot:F1NYZ9
Length = 1698
Score = 124 (48.7 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 33/101 (32%), Positives = 55/101 (54%)
Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 406
E +L+ L LN N+I G L +ALS + + +NLG + G +IA L +
Sbjct: 1587 EMPSLKRLILNHNSIGDDGCSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEMQN 1646
Query: 407 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
L+ ++L+ N S GG L++A+ N L+++ +S N FG+
Sbjct: 1647 LKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDFGD 1687
Score = 123 (48.4 bits), Expect = 0.00072, P = 0.00072
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
E L+ L LN N+I G L +ALS + + +NLG + G +IA L +
Sbjct: 1587 EMPSLKRLILNHNSIGDDGCSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEMQN 1646
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
L+ ++L+ N S GG L++A+ N L+++ +S N FG+
Sbjct: 1647 LKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDFGD 1687
Score = 100 (40.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 36/170 (21%), Positives = 78/170 (45%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
NR++N K + +F +++ L+++++ +N + + L+ F +N L++ +T+
Sbjct: 775 NRIQNPDVKTVMELFSRMEKLKKIDLSKNSLSLNAVLLLAKEFIACQNAAELHVRKDTVI 834
Query: 363 YK-----GAIPLGQALSKLPSLAIL----NLGDCL----LKSAGASSIAKYLTDNTTLED 409
G +P L + + + +L CL L S A I L L +
Sbjct: 835 ISFSGPSGKVPRSLDLKREQNKECVTPTRHLRLCLQARCLSSQHAKEIVSILQSCPHLSE 894
Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
V+L+ N++ +G L++ + + KQ+N+S N G+ + K + +
Sbjct: 895 VDLSDNKLGDEGCSFLLENLSWISISKQLNLSHNLLSVTGIYSLLKAVNT 944
Score = 97 (39.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 48/198 (24%), Positives = 84/198 (42%)
Query: 279 LHDCYESSKKEGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP--QNGIYH 335
LHD E PL LK F G L ++ + +E + M Q G
Sbjct: 1493 LHDDTEMLVSILLPLPDLKKFELTSCSFTPTGIDCLITGLQRCQAIEELNMNRLQIGKKQ 1552
Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIP-LGQALSKLPSLAILNLGDCLLKSAGA 394
+ ++ + +L H+ L D AIP L L ++PSL L L + G
Sbjct: 1553 QFLFTCNEGWVGETSLGHMKLGD------AAIPKLVFGLCEMPSLKRLILNHNSIGDDGC 1606
Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
S +A+ L+ +E++NL N+I G +++ + LK+I++S N G E++
Sbjct: 1607 SRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEMQNLKRIDLSGNCPSPAGGEKLM 1666
Query: 455 KLMKSFGMAAALVLEDDE 472
+ + + L+L ++
Sbjct: 1667 EALANCKHLEELILSRND 1684
Score = 83 (34.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 29/118 (24%), Positives = 52/118 (44%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
+ +EH+ ALS E L+ L + +IT G + QALS L
Sbjct: 709 RNVEHLSFRSRRFGDDFAAALSKGLGEMGSLKKLEVTGGSITAAGLTDMVQALSHCLQLE 768
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK---AMKNKTKL 124
+NL D +++ ++ + + L+ ++L+ N +S+ L L K A +N +L
Sbjct: 769 EINLQDNRIQNPDVKTVMELFSRMEKLKKIDLSKNSLSLNAVLLLAKEFIACQNAAEL 826
Score = 82 (33.9 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 38 KKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 97
+ + HL+ A L + L ++ SL L + + +AG + + + L+ LE
Sbjct: 709 RNVEHLSFRSRRFGDDFAAALSKGLGEMGSLKKLEVTGGSITAAGLTDMVQALSHCLQLE 768
Query: 98 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
++NL N I +++ KLK+I++S+N V
Sbjct: 769 EINLQDNRIQNPDVKTVMELFSRMEKLKKIDLSKNSLSLNAV 810
Score = 79 (32.9 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 35 EENKKL----RHLNL--NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
E+NK+ RHL L ++ + A + L P L+ ++L D L G S + +
Sbjct: 853 EQNKECVTPTRHLRLCLQARCLSSQHAKEIVSILQSCPHLSEVDLSDNKLGDEGCSFLLE 912
Query: 89 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
L+ + + +NL+ N +SV G L+KA+ ++ ++ VS
Sbjct: 913 NLSWISISKQLNLSHNLLSVTGIYSLLKAVNTCQRVVEVEVS 954
Score = 77 (32.2 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 30/140 (21%), Positives = 66/140 (47%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAIL 71
LE + + N I + + + + F +KL+ ++L+ N+++ + L + + A L
Sbjct: 767 LEEINLQDNRIQNPDVKTVMELFSRMEKLKKIDLSKNSLSLNAVLLLAKEFIACQNAAEL 826
Query: 72 NLG-DCLLKS-AGASSIAKYLTD---NTTLEDVNLT-----CNE---ISVQGGLDLVKAM 118
++ D ++ S +G S D E V T C + +S Q ++V +
Sbjct: 827 HVRKDTVIISFSGPSGKVPRSLDLKREQNKECVTPTRHLRLCLQARCLSSQHAKEIVSIL 886
Query: 119 KNKTKLKQINVSENQFGEEG 138
++ L ++++S+N+ G+EG
Sbjct: 887 QSCPHLSEVDLSDNKLGDEG 906
Score = 73 (30.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 16/63 (25%), Positives = 39/63 (61%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
A++++K L + +L+ + +T I+ G D+V+A+ + +L++IN+ +N+ V+ +
Sbjct: 726 AAALSKGLGEMGSLKKLEVTGGSITAAGLTDMVQALSHCLQLEEINLQDNRIQNPDVKTV 785
Query: 143 EKL 145
+L
Sbjct: 786 MEL 788
Score = 72 (30.4 bits), Expect = 0.00072, Sum P(4) = 0.00072
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVE--MPQNGIYHVGITALSDA 344
K+ +P+ K R + + L AV K+ ++ ++ + N + G+ L
Sbjct: 990 KENQTPVPSKKIRLTYCRFQASDLEKLCAVLKECGSISELDPSLSNNYLGDEGLAQLLQF 1049
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL 384
K LR L LN+N ++ L Q+L L L ++L
Sbjct: 1050 LPNLKTLRSLKLNNNHLSLSSVFCLAQSLCTLEHLETMDL 1089
Score = 69 (29.3 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 31/157 (19%), Positives = 69/157 (43%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYK-----GAIPLG 59
+F +++ L+ +++ +N + + L+ F + L++ +T+ G +P
Sbjct: 788 LFSRMEKLKKIDLSKNSLSLNAVLLLAKEFIACQNAAELHVRKDTVIISFSGPSGKVPRS 847
Query: 60 QALSKLPSLAIL----NLGDCL----LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 111
L + + + +L CL L S A I L L +V+L+ N++ +G
Sbjct: 848 LDLKREQNKECVTPTRHLRLCLQARCLSSQHAKEIVSILQSCPHLSEVDLSDNKLGDEGC 907
Query: 112 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
L++ + + KQ+N+S N G+ + K + +
Sbjct: 908 SFLLENLSWISISKQLNLSHNLLSVTGIYSLLKAVNT 944
Score = 66 (28.3 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 2 LAAVFKKLKTLEHVE--MPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLG 59
L AV K+ ++ ++ + N + G+ L K LR L LN+N ++ L
Sbjct: 1016 LCAVLKECGSISELDPSLSNNYLGDEGLAQLLQFLPNLKTLRSLKLNNNHLSLSSVFCLA 1075
Query: 60 QALSKLPSLAILNL 73
Q+L L L ++L
Sbjct: 1076 QSLCTLEHLETMDL 1089
Score = 54 (24.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRS-SCCFAXXXXXXXXXXXXITGCKLLSKAL 279
L++ L E+DLSDN G EG + LL + S +TG L KA+
Sbjct: 886 LQSCPHLSEVDLSDNKLGD---EGCSFLLENLSWISISKQLNLSHNLLSVTGIYSLLKAV 942
Query: 280 HDC 282
+ C
Sbjct: 943 NTC 945
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 27/118 (22%), Positives = 50/118 (42%)
Query: 27 ITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 86
I L E++ L L+L+ N + + L L ++P LNL + G +
Sbjct: 1258 IEKLCRVLEQHGCLAELDLSRNQLGDEVLRFLLDHLHRVPVTCSLNLSHNRISQRGVLHL 1317
Query: 87 AKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
T NTT V+L C++ ++ ++K K + ++E F E +E++
Sbjct: 1318 INTFTTSGNTTEVQVSL-CSKATL-----IIKMTSRDDPRKILRLTECSFQPEHLEKL 1369
Score = 48 (22.0 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 73 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
L DC + + + L + L +++L+ N++ + L+ + +N+S N
Sbjct: 1248 LTDCAIGQRQIEKLCRVLEQHGCLAELDLSRNQLGDEVLRFLLDHLHRVPVTCSLNLSHN 1307
Query: 133 QFGEEGV 139
+ + GV
Sbjct: 1308 RISQRGV 1314
Score = 48 (22.0 bits), Expect = 0.00072, Sum P(4) = 0.00072
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
L DC + + + L + L +++L+ N++ + L+ + +N+S N
Sbjct: 1248 LTDCAIGQRQIEKLCRVLEQHGCLAELDLSRNQLGDEVLRFLLDHLHRVPVTCSLNLSHN 1307
Query: 444 QFGEEGV 450
+ + GV
Sbjct: 1308 RISQRGV 1314
Score = 47 (21.6 bits), Expect = 6.8e-06, Sum P(4) = 6.8e-06
Identities = 13/64 (20%), Positives = 31/64 (48%)
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
L+L +C + + + + L T L +++L N ++ Q L+ + + +L +++
Sbjct: 1139 LSLRNCTVGPEDVTRLCQMLMQCTQLTEIDLCGNALNDQSIERLLSFLPHFCQLTLLSIR 1198
Query: 131 ENQF 134
N F
Sbjct: 1199 NNTF 1202
Score = 47 (21.6 bits), Expect = 0.00089, Sum P(4) = 0.00089
Identities = 13/64 (20%), Positives = 31/64 (48%)
Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
L+L +C + + + + L T L +++L N ++ Q L+ + + +L +++
Sbjct: 1139 LSLRNCTVGPEDVTRLCQMLMQCTQLTEIDLCGNALNDQSIERLLSFLPHFCQLTLLSIR 1198
Query: 442 ENQF 445
N F
Sbjct: 1199 NNTF 1202
Score = 43 (20.2 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSC 253
+L E+DL NA +E L L C
Sbjct: 1163 QLTEIDLCGNALNDQSIERLLSFLPHFC 1190
Score = 37 (18.1 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 227 LVELDLSDNAFGPIGVEGLADLL 249
L ELDLS N G + L D L
Sbjct: 1271 LAELDLSRNQLGDEVLRFLLDHL 1293
>UNIPROTKB|F1LYY4 [details] [associations]
symbol:Lrrc16a "Protein Lrrc16a" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0031529 "ruffle
organization" evidence=IEA] [GO:0046415 "urate metabolic process"
evidence=IEA] RGD:1306623 GO:GO:0005634 GO:GO:0005737 GO:GO:0016477
GO:GO:0030027 GO:GO:0046415 GO:GO:0030032 GO:GO:0031529
IPI:IPI00951138 Ensembl:ENSRNOT00000022266 ArrayExpress:F1LYY4
Uniprot:F1LYY4
Length = 1328
Score = 118 (46.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 41/161 (25%), Positives = 77/161 (47%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL--NDNTIT 362
L + GA++L ++ + +++ NG+ ++ L N++++HL L N N +
Sbjct: 424 LRSGGAQVLEGCIAEIHNITSLDISDNGL-ESDLSTLIVWLSRNRSIQHLALGKNFNNMK 482
Query: 363 YKGAIP----LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
K P L Q + S L L+L D LK+ + I L NT+L V+++ N +
Sbjct: 483 SKNLTPVLDNLVQMIQDEDSPLQSLSLADSKLKTE-VTIIINALGSNTSLTKVDISGNSM 541
Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
G L KA++ TKL+ + +N +G +++ M+
Sbjct: 542 GDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAME 582
Score = 97 (39.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 38/152 (25%), Positives = 75/152 (49%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLP---- 66
L + + N + G+++LS F + K L+HLNL+ +++ KG L Q+LS P
Sbjct: 232 LHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTAS 291
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LK 125
+L L+L +L+ S + +L T+ ++L+ E S++ + ++ + L
Sbjct: 292 TLTHLDLSGNVLRGDDLSHMYNFLAQPNTIVHLDLSNTECSLE--MVCSALLRGCLQCLA 349
Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
+N+S + F +E+ K F +++L L
Sbjct: 350 VLNLSRSVFSHRKGKEVPPSFKQF-FSSSLAL 380
Score = 83 (34.3 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+E+ L+ L+L D+ + + I + AL SL +++ + GA +AK L NT
Sbjct: 499 DEDSPLQSLSLADSKLKTEVTIIIN-ALGSNTSLTKVDISGNSMGDMGAKMLAKALQINT 557
Query: 406 TLEDVNLTCNEISVQGGLDLVKAM-KNKT 433
L V N I+ QG D+ AM KN T
Sbjct: 558 KLRTVIWDKNNITAQGFQDIAVAMEKNYT 586
Score = 76 (31.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 38/143 (26%), Positives = 66/143 (46%)
Query: 290 GSPLAL-KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
GS +L KV I+G N + + GAKMLA + L V +N I G ++ A E+N
Sbjct: 526 GSNTSLTKVDISG-NSMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKN 584
Query: 349 KNLRHLNLN--DNTITYKGAIP-LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
LR + + D + K + +AL K+ + + N A + + + +T
Sbjct: 585 YTLRFMPIPMYDASQALKTSPEKTEEALQKIENYLLRNHETRKYLQEQAYRLQQGIVTST 644
Query: 406 TLEDVNLTCNEISVQGGLDLVKA 428
T + ++ C + VQ L+ ++A
Sbjct: 645 TQQMIDRIC--VKVQDHLNSLRA 665
Score = 69 (29.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 33 AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLT 91
A N L +NL N + +G L +KLP L LNL L G +S+ + L+
Sbjct: 225 AHNPNSGLHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLS 284
Query: 92 DN----TTLEDVNLTCN 104
N +TL ++L+ N
Sbjct: 285 ANPLTASTLTHLDLSGN 301
Score = 61 (26.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 33/152 (21%), Positives = 69/152 (45%)
Query: 2 LAAVFKKL-KTLEHVEMPQNGIYHVGITALSDAFEEN----KKLRHLNLNDNTITYKGAI 56
L+ F KL K L+H+ + + + G+ +L + N L HL+L+ N +
Sbjct: 250 LSIQFAKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNVLRGDDLS 309
Query: 57 PLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDL 114
+ L++ ++ L+L +C L+ ++ + L L +NL+ + S + G ++
Sbjct: 310 HMYNFLAQPNTIVHLDLSNTECSLEMVCSALLRGCLQ---CLAVLNLSRSVFSHRKGKEV 366
Query: 115 VKAMK----NKTKLKQINVSENQFGEEGVEEM 142
+ K + L QIN+S + E ++ +
Sbjct: 367 PPSFKQFFSSSLALIQINLSGTKLSPEPLKAL 398
>UNIPROTKB|F1NWT4 [details] [associations]
symbol:F1NWT4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0031529 "ruffle
organization" evidence=IEA] [GO:0046415 "urate metabolic process"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0016477
GO:GO:0030027 GO:GO:0046415 GO:GO:0030032 GO:GO:0031529 OMA:TLIVWLS
GeneTree:ENSGT00390000014487 EMBL:AADN02008322 EMBL:AADN02008323
IPI:IPI00601113 Ensembl:ENSGALT00000022135 Uniprot:F1NWT4
Length = 1323
Score = 123 (48.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 41/156 (26%), Positives = 77/156 (49%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL--NDNTIT 362
L + GA++L +++ + +++ NG+ ++ L +N+++RHL L N N +
Sbjct: 420 LRSGGAQVLEGCIAEIRNITSLDISDNGL-ESDLSTLVVWLSKNRSIRHLALGKNFNNMK 478
Query: 363 YKGAIP----LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
K P L Q + S L L+L D LK+ + I L NT+L V+++ N +
Sbjct: 479 SKNLTPVLDNLVQMIQDEDSPLQSLSLADSKLKTE-VTIIINALGSNTSLTKVDISGNAM 537
Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
G L KA++ TKL+ + +N +G +++
Sbjct: 538 GDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDI 573
Score = 91 (37.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/154 (25%), Positives = 71/154 (46%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSK----LP 66
L + + N + G+++LS F + K L+HLNL+ +++ KG L Q+LS
Sbjct: 232 LHTINLASNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANSLIAN 291
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
+L L+L L+ SS+ +L L ++L+ E + LD+V + L+
Sbjct: 292 TLVYLDLSGNALRGDDLSSLYNFLAQPNALVHLDLSNTECA----LDMVCGALLRGCLQH 347
Query: 127 INV---SENQFGEEGVEEMEKLMKSFGMAAALVL 157
+ V S F +E+ K F +++L L
Sbjct: 348 LAVLSLSRTLFSHRKGKEVPPSFKQF-FSSSLAL 380
Score = 83 (34.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+E+ L+ L+L D+ + + I + AL SL +++ + GA +AK L NT
Sbjct: 495 DEDSPLQSLSLADSKLKTEVTIIIN-ALGSNTSLTKVDISGNAMGDMGAKMLAKALQINT 553
Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 465
L V N I+ QG D+ A++ L+ + + N + EK ++
Sbjct: 554 KLRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPMNDASQALKTNPEKTEEALQKIEN 613
Query: 466 LVLEDDE 472
+L + E
Sbjct: 614 YLLRNHE 620
Score = 80 (33.2 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 290 GSPLAL-KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
GS +L KV I+G N + + GAKMLA + L V +N I G ++ A E+N
Sbjct: 522 GSNTSLTKVDISG-NAMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVALEKN 580
Query: 349 KNLRHLNL--NDNTITYK-GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
LR + + ND + K +AL K+ + + N A + + + +T
Sbjct: 581 YTLRFMPIPMNDASQALKTNPEKTEEALQKIENYLLRNHETRKYLQEQAYRLQQGIVTST 640
Query: 406 TLEDVNLTCNEISVQGGLDLVK 427
T + ++ C + VQ L+ ++
Sbjct: 641 TQQMIDRIC--VKVQDHLNSLR 660
Score = 71 (30.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 25/95 (26%), Positives = 41/95 (43%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK--LRHLNLNDNTITYKGAIPLGQAL 62
V + LE + + G+ L+ A N L +NL N + +G L
Sbjct: 195 VVSRSNRLEELVLENAGLRTDFAQKLASALSHNPNSGLHTINLASNPLEDRGVSSLSIQF 254
Query: 63 SKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTL 96
+KLP L LNL L G +S+++ L+ N+ +
Sbjct: 255 AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANSLI 289
Score = 47 (21.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 28/140 (20%), Positives = 61/140 (43%)
Query: 11 TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK-LPSLA 69
TL ++++ N + +++L + + L HL+L+ NT + G L L LA
Sbjct: 292 TLVYLDLSGNALRGDDLSSLYNFLAQPNALVHLDLS-NTECALDMV-CGALLRGCLQHLA 349
Query: 70 ILNLGDCLLKSAGAS----SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
+L+L L S ++ + + L +NL+ ++ + L+ + LK
Sbjct: 350 VLSLSRTLFSHRKGKEVPPSFKQFFSSSLALMQINLSGTKLPPEPLKALLLGLACNHNLK 409
Query: 126 QINV--SENQFGEEGVEEME 143
++++ S + G + +E
Sbjct: 410 EVSLDLSSCELRSGGAQVLE 429
>UNIPROTKB|Q5VZK9 [details] [associations]
symbol:LRRC16A "Leucine-rich repeat-containing protein 16A"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0046415 "urate
metabolic process" evidence=IMP] [GO:0031529 "ruffle organization"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0030032 "lamellipodium assembly" evidence=IMP] [GO:0007015
"actin filament organization" evidence=NAS] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_604
GO:GO:0005829 GO:GO:0005634 GO:GO:0016477 GO:GO:0007015
GO:GO:0007596 GO:GO:0030027 GO:GO:0046415 GO:GO:0030032
GO:GO:0031529 PDB:3LK2 PDB:3LK3 PDBsum:3LK2 PDBsum:3LK3
eggNOG:NOG239526 EMBL:AK123817 EMBL:AK125696 EMBL:AK000055
EMBL:AL160037 EMBL:AL022170 EMBL:AL024509 IPI:IPI00014843
IPI:IPI00446337 IPI:IPI00873593 IPI:IPI00887902 RefSeq:NP_060110.4
UniGene:Hs.649550 ProteinModelPortal:Q5VZK9 SMR:Q5VZK9
DIP:DIP-56920N IntAct:Q5VZK9 STRING:Q5VZK9 PhosphoSite:Q5VZK9
DMDM:74762279 PaxDb:Q5VZK9 PeptideAtlas:Q5VZK9 PRIDE:Q5VZK9
DNASU:55604 Ensembl:ENST00000329474 Ensembl:ENST00000377969
GeneID:55604 KEGG:hsa:55604 UCSC:uc003nez.1 UCSC:uc011djw.2
CTD:55604 GeneCards:GC06P025279 H-InvDB:HIX0005632 HGNC:HGNC:21581
HPA:HPA029038 HPA:HPA029039 MIM:609593 neXtProt:NX_Q5VZK9
PharmGKB:PA162394368 HOGENOM:HOG000230565 HOVERGEN:HBG108094
InParanoid:Q5VZK9 OMA:TLIVWLS OrthoDB:EOG4GTKC4 ChiTaRS:LRRC16A
EvolutionaryTrace:Q5VZK9 GenomeRNAi:55604 NextBio:60153 Bgee:Q5VZK9
CleanEx:HS_LRRC16A Genevestigator:Q5VZK9 Uniprot:Q5VZK9
Length = 1371
Score = 117 (46.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL--NDNTIT 362
L + GA++L ++ + +++ NG+ ++ L +N++++HL L N N +
Sbjct: 466 LRSGGAQVLEGCIAEIHNITSLDISDNGL-ESDLSTLIVWLSKNRSIQHLALGKNFNNMK 524
Query: 363 YKGAIP----LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 417
K P L Q + S L L+L D LK+ + I L NT+L V+++ N +
Sbjct: 525 SKNLTPVLDNLVQMIQDEESPLQSLSLADSKLKTE-VTIIINALGSNTSLTKVDISGNGM 583
Query: 418 SVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
G L KA++ TKL+ + +N +G +++ M+
Sbjct: 584 GDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAME 624
Score = 96 (38.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 40/154 (25%), Positives = 74/154 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSKLP---- 66
L + + N + G+++LS F + K L+HLNL+ +++ KG L Q+LS P
Sbjct: 278 LHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTAS 337
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV--KAMKNKTK- 123
+L L+L +L+ S + +L + ++L+ E S LD+V ++ +
Sbjct: 338 TLVHLDLSGNVLRGDDLSHMYNFLAQPNAIVHLDLSNTECS----LDMVCGALLRGCLQY 393
Query: 124 LKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
L +N+S F +E+ K F +++L L
Sbjct: 394 LAVLNLSRTVFSHRKGKEVPPSFKQF-FSSSLAL 426
Score = 80 (33.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+E L+ L+L D+ + + I + AL SL +++ + GA +AK L NT
Sbjct: 541 DEESPLQSLSLADSKLKTEVTIIIN-ALGSNTSLTKVDISGNGMGDMGAKMLAKALQINT 599
Query: 406 TLEDVNLTCNEISVQGGLDLVKAM-KNKT 433
L V N I+ QG D+ AM KN T
Sbjct: 600 KLRTVIWDKNNITAQGFQDIAVAMEKNYT 628
Score = 69 (29.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 33 AFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLT 91
A N L +NL N + +G L +KLP L LNL L G +S+++ L+
Sbjct: 271 AHNPNSGLHTINLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLS 330
Query: 92 DN----TTLEDVNLTCN 104
N +TL ++L+ N
Sbjct: 331 ANPLTASTLVHLDLSGN 347
Score = 56 (24.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 2 LAAVFKKL-KTLEHVEMPQNGIYHVGITALSDAFEEN----KKLRHLNLNDNTI 50
L+ F KL K L+H+ + + + G+ +LS + N L HL+L+ N +
Sbjct: 296 LSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLVHLDLSGNVL 349
>UNIPROTKB|F1PS97 [details] [associations]
symbol:NLRP8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
OMA:DIFAKMN EMBL:AAEX03000720 Ensembl:ENSCAFT00000003948
Uniprot:F1PS97
Length = 1028
Score = 137 (53.3 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 44/139 (31%), Positives = 74/139 (53%)
Query: 303 NRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N L++EGAK L + + + L+R+ + + ++ A +NKNLR L+L N++
Sbjct: 889 NALKDEGAKQLCSALQHPMCPLQRLVLRNCALTSDCCQDMASALGKNKNLRSLDLGFNSL 948
Query: 362 TYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
G L +AL K S L IL L CL S ++A L N +L ++++ N+I ++
Sbjct: 949 KDDGVTLLFEALKKSESGLQILELERCLFTSLCCQAMASMLLHNQSLRYLDVSKNDIGLR 1008
Query: 421 GGLDLVKAMK-NKTKLKQI 438
G L L +A + +K K K +
Sbjct: 1009 GILLLREAFQQHKWKKKVV 1027
Score = 72 (30.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 40 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 99
L+ L L D +T K + L + L L L L L++ GA ++ + LE+
Sbjct: 802 LQCLRLEDCAVTPKSWVELARDLGSNRHLKTLMLRSSCLETFGAYYLSLAQLERLLLENC 861
Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 142
LT +S + L+ ++ + L ++++EN +EG +++
Sbjct: 862 GLTV--LSCKS---LMSSLMSNKMLTHLSLAENALKDEGAKQL 899
Score = 39 (18.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 102 TCNEISVQGGLDLVKAMKNKT 122
+C ++ G+DLV+A N T
Sbjct: 416 SCLRQQMEKGVDLVQAYPNAT 436
>UNIPROTKB|Q6E804 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9913 "Bos taurus" [GO:0002830
"positive regulation of type 2 immune response" evidence=ISS]
[GO:0032495 "response to muramyl dipeptide" evidence=IDA]
[GO:0046645 "positive regulation of gamma-delta T cell activation"
evidence=IMP] [GO:0090022 "regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0071224 "cellular response to
peptidoglycan" evidence=IEA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050871
"positive regulation of B cell activation" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=IEA] [GO:0050700 "CARD
domain binding" evidence=IEA] [GO:0046330 "positive regulation of
JNK cascade" evidence=IEA] [GO:0044130 "negative regulation of
growth of symbiont in host" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032740 "positive
regulation of interleukin-17 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032701 "negative
regulation of interleukin-18 production" evidence=IEA] [GO:0032695
"negative regulation of interleukin-12 production" evidence=IEA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA] [GO:0032500 "muramyl dipeptide binding" evidence=IEA]
[GO:0032498 "detection of muramyl dipeptide" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016045
"detection of bacterium" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0006965
"positive regulation of biosynthetic process of antibacterial
peptides active against Gram-positive bacteria" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002710 "negative regulation
of T cell mediated immunity" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002367 "cytokine production
involved in immune response" evidence=IEA] [GO:0002227 "innate
immune response in mucosa" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0032496
GO:GO:0070374 GO:GO:0032755 GO:GO:0045747 GO:GO:0050731
GO:GO:0050766 GO:GO:0032720 GO:GO:0044130 GO:GO:0035419
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0043330 GO:GO:0032495 GO:GO:0002606 GO:GO:0032735
GO:GO:0043552 GO:GO:0051770 GO:GO:2000110 GO:GO:0032733
GO:GO:0002830 GO:GO:0032703 GO:GO:0032874 GO:GO:0060585
GO:GO:0090022 GO:GO:0002925 GO:GO:0070431 GO:GO:0032740
GO:GO:0050871 GO:GO:0034136 GeneTree:ENSGT00660000095240
EMBL:AY518737 EMBL:AY518748 EMBL:AY518739 EMBL:AY518740
EMBL:AY518741 EMBL:AY518742 EMBL:AY518743 EMBL:AY518744
EMBL:AY518745 EMBL:AY518746 EMBL:AY518747 IPI:IPI00717866
RefSeq:NP_001002889.1 UniGene:Bt.30778 ProteinModelPortal:Q6E804
STRING:Q6E804 Ensembl:ENSBTAT00000027887 GeneID:444867
KEGG:bta:444867 CTD:64127 eggNOG:NOG248107 HOGENOM:HOG000113814
InParanoid:Q6E804 KO:K10165 OMA:WASGRAF OrthoDB:EOG4WM4T6
NextBio:20831757 GO:GO:0032500 GO:GO:0071224 GO:GO:0002367
GO:GO:0032498 GO:GO:0071608 GO:GO:0032701 GO:GO:0002710
GO:GO:0046645 GO:GO:2000363 Uniprot:Q6E804
Length = 1013
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 66/233 (28%), Positives = 97/233 (41%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYES 285
R V L L N+ G IGVE L L C A I CKL+ AL C +
Sbjct: 764 RPVALQLDHNSVGDIGVEQLLPCL--GVCKALYLRDNNISDRGI--CKLVEHALR-CEQL 818
Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
K LAL F N+L + A +A + + + + N I G L+
Sbjct: 819 QK-----LAL--F---NNKLTDGCAHSMARLLACKQNFLALRLGNNHITAAGAEVLAQGL 868
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
N +L+ L N + +GA L AL SL L+L + S GA ++A L N
Sbjct: 869 RTNNSLQFLGFWGNQVGDEGAQALAAALGDHQSLRWLSLVGNNIGSVGAQALALMLEKNM 928
Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
LE++ L N + +G L K + + LK + +S N G E + + ++
Sbjct: 929 ALEELCLEENHVQDEGVCFLAKGLARNSSLKVLKLSNNHISSLGAEALLRALE 981
Score = 122 (48.0 bits), Expect = 0.00051, P = 0.00051
Identities = 36/133 (27%), Positives = 58/133 (43%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+ + N I G L+ N L+ L N + +GA L AL SL L+L
Sbjct: 849 LRLGNNHITAAGAEVLAQGLRTNNSLQFLGFWGNQVGDEGAQALAAALGDHQSLRWLSLV 908
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ S GA ++A L N LE++ L N + +G L K + + LK + +S N
Sbjct: 909 GNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCFLAKGLARNSSLKVLKLSNNHI 968
Query: 135 GEEGVEEMEKLMK 147
G E + + ++
Sbjct: 969 SSLGAEALLRALE 981
Score = 120 (47.3 bits), Expect = 0.00085, P = 0.00085
Identities = 39/142 (27%), Positives = 71/142 (50%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+LA + +L+ + N + G AL+ A +++ LR L+L N I GA L
Sbjct: 863 VLAQGLRTNNSLQFLGFWGNQVGDEGAQALAAALGDHQSLRWLSLVGNNIGSVGAQALAL 922
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L K +L L L + ++ G +AK L N++L+ + L+ N IS G L++A++
Sbjct: 923 MLEKNMALEELCLEENHVQDEGVCFLAKGLARNSSLKVLKLSNNHISSLGAEALLRALEK 982
Query: 121 KTKLKQINVSENQFGEEGVEEM 142
+ ++ + N F E +E++
Sbjct: 983 NDTILEVWLRGNTFSPEEIEKL 1004
Score = 99 (39.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 20 NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
N I GI L + ++L+ L L +N +T A + + L+ + L LG+ +
Sbjct: 798 NNISDRGICKLVEHALRCEQLQKLALFNNKLTDGCAHSMARLLACKQNFLALRLGNNHIT 857
Query: 80 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
+AGA +A+ L N +L+ + N++ +G L A+ + L+ +++ N G G
Sbjct: 858 AAGAEVLAQGLRTNNSLQFLGFWGNQVGDEGAQALAAALGDHQSLRWLSLVGNNIGSVGA 917
Query: 140 EEMEKLMKSFGMA 152
+ + LM MA
Sbjct: 918 QALA-LMLEKNMA 929
Score = 72 (30.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
+AL+ N +++EG LA + +L+ +++ N I +G AL A E+N +
Sbjct: 928 MALEELCLEENHVQDEGVCFLAKGLARNSSLKVLKLSNNHISSLGAEALLRALEKNDTIL 987
Query: 353 HLNLNDNTIT 362
+ L NT +
Sbjct: 988 EVWLRGNTFS 997
>ZFIN|ZDB-GENE-070912-120 [details] [associations]
symbol:si:ch211-156p11.1 "si:ch211-156p11.1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-070912-120
GO:GO:0005524 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00690000101971 EMBL:BX927329 EMBL:CR936376
IPI:IPI00868161 Ensembl:ENSDART00000105988 Bgee:F1R8I8
Uniprot:F1R8I8
Length = 871
Score = 125 (49.1 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 39/139 (28%), Positives = 75/139 (53%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPS-LA 69
L +++ QN + G+ LSD + ++ KL LNL +IT + L AL PS L
Sbjct: 621 LRELDLSQNKL-ESGVKNLSDLLKNHQCKLEKLNLCKCSITKEQCEILTSALKSNPSYLR 679
Query: 70 ILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQI 127
L+L + +++ G + + L D+ L+ + L+ E++ + + A+K N + L+++
Sbjct: 680 ELDLSENQIRNTGLNLLCDVLKDSHCRLQTLRLSSCEMTDEACSAVTSALKSNPSHLREL 739
Query: 128 NVSENQFGEEGVEEMEKLM 146
N+S N+ G+ GV+ + L+
Sbjct: 740 NLSYNKLGDSGVKNLSYLL 758
Score = 124 (48.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 52/200 (26%), Positives = 87/200 (43%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L ELDLS+N G+ L D+L+ S C ++ C++ +A +S
Sbjct: 678 LRELDLSENQIRNTGLNLLCDVLKDSHC--------RLQTLRLSSCEMTDEACSAV--TS 727
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAF 345
+ +P L+ N+L + G K L+ + K + LE++ + I L+ A
Sbjct: 728 ALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKLEKLHLCNCSITEEQCVILTSAL 787
Query: 346 EEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIAKYLT 402
+ N +LR LNL+ N + G L L K P + L+L C + + L
Sbjct: 788 KSNPSHLRELNLSCNELADSGVKNLSDLLMK-PQFRLEKLHLYKCSITEKQCKILTSALK 846
Query: 403 DNTT-LEDVNLTCNEISVQG 421
N + L ++NL+ N+I G
Sbjct: 847 SNPSHLRELNLSENQIRNTG 866
Score = 121 (47.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/158 (25%), Positives = 82/158 (51%)
Query: 305 LENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTIT 362
+ + ++L + K + L +++ QN + G+ LSD + ++ L LNL +IT
Sbjct: 602 ITEQQCEILTSALKSNPSHLRELDLSQNKL-ESGVKNLSDLLKNHQCKLEKLNLCKCSIT 660
Query: 363 YKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQ 420
+ L AL PS L L+L + +++ G + + L D+ L+ + L+ E++ +
Sbjct: 661 KEQCEILTSALKSNPSYLRELDLSENQIRNTGLNLLCDVLKDSHCRLQTLRLSSCEMTDE 720
Query: 421 GGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLM 457
+ A+K N + L+++N+S N+ G+ GV+ + L+
Sbjct: 721 ACSAVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLL 758
Score = 117 (46.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 41/159 (25%), Positives = 80/159 (50%)
Query: 305 LENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTIT 362
+ E ++L + K + L +++ +N I + G+ L D +++ L+ L L+ +T
Sbjct: 659 ITKEQCEILTSALKSNPSYLRELDLSENQIRNTGLNLLCDVLKDSHCRLQTLRLSSCEMT 718
Query: 363 YKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCN-EISV 419
+ + AL PS L LNL L +G +++ L LE ++L CN I+
Sbjct: 719 DEACSAVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKLEKLHL-CNCSITE 777
Query: 420 QGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLM 457
+ + L A+K N + L+++N+S N+ + GV+ + L+
Sbjct: 778 EQCVILTSALKSNPSHLRELNLSCNELADSGVKNLSDLL 816
Score = 91 (37.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 43/146 (29%), Positives = 70/146 (47%)
Query: 314 AAVFKKLKT----LERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIP 368
+AV LK+ L + + N + G+ LS + + L L+L + +IT + +
Sbjct: 723 SAVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKLEKLHLCNCSITEEQCVI 782
Query: 369 LGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNL-TCNEISVQGGLDL 425
L AL PS L LNL L +G +++ L LE ++L C+ Q + L
Sbjct: 783 LTSALKSNPSHLRELNLSCNELADSGVKNLSDLLMKPQFRLEKLHLYKCSITEKQCKI-L 841
Query: 426 VKAMK-NKTKLKQINVSENQFGEEGV 450
A+K N + L+++N+SENQ GV
Sbjct: 842 TSALKSNPSHLRELNLSENQIRNTGV 867
Score = 89 (36.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 56/243 (23%), Positives = 102/243 (41%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHD-CY 283
+ L+EL+L N G GV+ L +LL+ C + + LS A + C
Sbjct: 504 SHLIELNLGGNDPGQSGVKELTNLLQDPHC-------------TLKTLRFLSSAADEICQ 550
Query: 284 ESSKKEG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITAL 341
++ G +PL L ++L + L+A+ + K + + I L
Sbjct: 551 HVAEIVGKNPLLLTELNLSNHKLGDTRVNQLSALLQDKHCKFNTLILRCCSITEQQCEIL 610
Query: 342 SDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAK 399
+ A + N +LR L+L+ N + G L L L LNL C + +
Sbjct: 611 TSALKSNPSHLRELDLSQNKLE-SGVKNLSDLLKNHQCKLEKLNLCKCSITKEQCEILTS 669
Query: 400 YLTDNTT-LEDVNLTCNEISVQGGLDLV-KAMKNK-TKLKQINVSENQFGEEGVEEMEKL 456
L N + L +++L+ N+I GL+L+ +K+ +L+ + +S + +E +
Sbjct: 670 ALKSNPSYLRELDLSENQIR-NTGLNLLCDVLKDSHCRLQTLRLSSCEMTDEACSAVTSA 728
Query: 457 MKS 459
+KS
Sbjct: 729 LKS 731
Score = 81 (33.6 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 60 QALSKLP---SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 116
Q L LP S I L +C L+ S++A L+ L D C+ IS +G L
Sbjct: 447 QCLKHLPLMGSFQINTLRNCALREESCSALASVLS----LSD----CS-ISEEGCKALTS 497
Query: 117 AMK-NKTKLKQINVSENQFGEEGVEEMEKLMK 147
A++ N + L ++N+ N G+ GV+E+ L++
Sbjct: 498 ALRSNPSHLIELNLGGNDPGQSGVKELTNLLQ 529
Score = 80 (33.2 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAI-LNLGDCLLKSAGASSIAKYLTDN----TTLE 97
L+L+D +I+ +G L AL PS I LNLG +G + L D TL
Sbjct: 480 LSLSDCSISEEGCKALTSALRSNPSHLIELNLGGNDPGQSGVKELTNLLQDPHCTLKTLR 539
Query: 98 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
++ +EI Q ++V KN L ++N+S ++ G+ V ++ L++
Sbjct: 540 FLSSAADEIC-QHVAEIVG--KNPLLLTELNLSNHKLGDTRVNQLSALLQ 586
Score = 73 (30.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 33/116 (28%), Positives = 59/116 (50%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDN 93
+++ K L L +IT + L AL PS L L+L L+S G +++ L ++
Sbjct: 587 DKHCKFNTLILRCCSITEQQCEILTSALKSNPSHLRELDLSQNKLES-GVKNLSDLLKNH 645
Query: 94 TT-LEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGEEGVEEMEKLMK 147
LE +NL I+ + L A+K N + L+++++SENQ G+ + ++K
Sbjct: 646 QCKLEKLNLCKCSITKEQCEILTSALKSNPSYLRELDLSENQIRNTGLNLLCDVLK 701
Score = 59 (25.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 26/94 (27%), Positives = 39/94 (41%)
Query: 221 LKTG-ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
LK+ + L EL+LS N GV+ L+DLL F CK+L+ AL
Sbjct: 787 LKSNPSHLRELNLSCNELADSGVKNLSDLLMKPQ-FRLEKLHLYKCSITEKQCKILTSAL 845
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKML 313
+ +P L+ N++ N G +L
Sbjct: 846 ---------KSNPSHLRELNLSENQIRNTGVNLL 870
>UNIPROTKB|E1B9F2 [details] [associations]
symbol:E1B9F2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060340 "positive regulation of type I
interferon-mediated signaling pathway" evidence=IEA] [GO:0060339
"negative regulation of type I interferon-mediated signaling
pathway" evidence=IEA] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045345 "positive regulation of MHC
class I biosynthetic process" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0043549 "regulation of kinase
activity" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003593 PROSITE:PS51450 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0045944
GO:GO:0045087 GO:GO:0051607 GO:GO:0017111 GO:GO:0032088
GO:GO:0000979 GO:GO:0043549 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0045345 GO:GO:0060339 GO:GO:0060340 GO:GO:0060335 OMA:EILLSWN
GeneTree:ENSGT00660000095240 EMBL:DAAA02046507 IPI:IPI00701505
Ensembl:ENSBTAT00000007129 Uniprot:E1B9F2
Length = 1916
Score = 115 (45.5 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 43/152 (28%), Positives = 73/152 (48%)
Query: 275 LSKALHD---CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
LSK+ D C SK + +L+ N++ N GA+ LAAV L L ++++ N
Sbjct: 1634 LSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAVLPGLPELRKIDLSAN 1693
Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKS 391
GI G L+++ ++L L L N + A+ L + L + L +L+L L
Sbjct: 1694 GIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKGLPQ--HLRVLHLPSSHLSP 1751
Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
G S+ + L +E+++L N S+ GG+
Sbjct: 1752 EGVLSLGQALDGCPHVEEISLAEN--SLAGGV 1781
Score = 108 (43.1 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 57/248 (22%), Positives = 96/248 (38%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLL------RSSCCFAXXX--XXXXXXXXXITGC 272
L+ L EL LS N G IG + LA +L R A +T C
Sbjct: 1651 LRAATSLEELSLSHNQIGNIGAQDLAAVLPGLPELRKIDLSANGIGPAGGARLAESLTLC 1710
Query: 273 KLLSK------ALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 326
+ L + AL DC +G P L+V + L EG L +E +
Sbjct: 1711 RHLEELMLGCNALGDCTALGLAKGLPQHLRVLHLPSSHLSPEGVLSLGQALDGCPHVEEI 1770
Query: 327 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 386
+ +N + G+ F LR L+L I + A PL + +L + L
Sbjct: 1771 SLAENSLAG-GVPHFHQGFPV---LRKLDLVSCEIDNQTAKPLAASFVLCLALEEITLSW 1826
Query: 387 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
LL A+ +A+ L L+ ++L N+I+ G L + + + ++ I + N+
Sbjct: 1827 NLLGDEAAAELARVLPQMGRLKRMDLEKNQITAYGAWLLAEGLAQGSGIQVIRLWNNRIP 1886
Query: 447 EEGVEEME 454
+ + ++
Sbjct: 1887 PDMAQHLQ 1894
Score = 107 (42.7 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 328 MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
+ ++ I VG LS A +L L+L+ N I GA L L LP L ++L
Sbjct: 1634 LSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAVLPGLPELRKIDLSAN 1693
Query: 388 LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
+ AG + +A+ LT LE++ L CN + L L K + L+ +++ +
Sbjct: 1694 GIGPAGGARLAESLTLCRHLEELMLGCNALGDCTALGLAKGLPQH--LRVLHLPSSHLSP 1751
Query: 448 EGV 450
EGV
Sbjct: 1752 EGV 1754
Score = 103 (41.3 bits), Expect = 4.8e-06, Sum P(4) = 4.8e-06
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
G P K+ ++ N + G LA + LE + + N + TAL A +
Sbjct: 1681 GLPELRKIDLSA-NGIGPAGGARLAESLTLCRHLEELMLGCNALGDC--TALGLAKGLPQ 1737
Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
+LR L+L + ++ +G + LGQAL P + ++L + L A + + L
Sbjct: 1738 HLRVLHLPSSHLSPEGVLSLGQALDGCPHVEEISLAENSL----AGGVPHFHQGFPVLRK 1793
Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLE 469
++L EI Q L + L++I +S N G+E E+ +++ G + LE
Sbjct: 1794 LDLVSCEIDNQTAKPLAASFVLCLALEEITLSWNLLGDEAAAELARVLPQMGRLKRMDLE 1853
Query: 470 DDE 472
++
Sbjct: 1854 KNQ 1856
Score = 87 (35.7 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 30/103 (29%), Positives = 47/103 (45%)
Query: 29 ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
ALS + L+ L L + IT +G L QAL P L ++ D LK +I +
Sbjct: 713 ALSKSLPTMGSLKKLGLAGSKITAQGISHLVQALPFCPQLEEVSFQDNQLKDREVLNIVE 772
Query: 89 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
L+ L+ ++L+ N +SV L L K ++ + V E
Sbjct: 773 VLSCLPRLQKLDLSRNNVSVSTLLSLTKVAVTCPTIRMLQVRE 815
Score = 87 (35.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 35/186 (18%), Positives = 86/186 (46%)
Query: 288 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 347
+EG L +V ++G N+L+++G +++A +L +++++ N + G+ +
Sbjct: 875 REGPQLD-EVDLSG-NQLKDKGCQLMAEAAPQLHITKKLDLSDNELSVAGVLGVLSVVNT 932
Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
+ L L+++ + +K + + P L ++ S+ ++ +L
Sbjct: 933 YQTLTELHIS---LLHKTVV-----FTFAPELE--EQEGIQKRATFPDSLMFQMSSEPSL 982
Query: 408 EDVNLTCNEISVQGG-LDLV-KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAA 465
+ ++Q L+L+ KA+ +L +++S N G+EGV + +L+ G +
Sbjct: 983 RSPRIRLTHCALQAQRLELLCKALGGSCRLSHLDLSGNALGDEGVALLARLLPGLGSLQS 1042
Query: 466 LVLEDD 471
L L ++
Sbjct: 1043 LNLSEN 1048
Score = 85 (35.0 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 98
+LR L+L+ + ++ L L L L L + S G + + L+ LE+
Sbjct: 1467 RLRQLSLSQVNLCDASSLLLQSLLLSLSELKNFRLTSSCVSSKGLALLTSGLSHCHLLEE 1526
Query: 99 VNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
++L+ N++ +G L+ A++ K +LK++++S G
Sbjct: 1527 LDLSNNQLGDEGTKVLLGALEGKCRLKRLDLSHLPLG 1563
Score = 83 (34.3 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 410
LR L+L+ + ++ L L L L L + S G + + L+ LE++
Sbjct: 1468 LRQLSLSQVNLCDASSLLLQSLLLSLSELKNFRLTSSCVSSKGLALLTSGLSHCHLLEEL 1527
Query: 411 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 446
+L+ N++ +G L+ A++ K +LK++++S G
Sbjct: 1528 DLSNNQLGDEGTKVLLGALEGKCRLKRLDLSHLPLG 1563
Score = 76 (31.8 bits), Expect = 4.9e-05, Sum P(4) = 4.9e-05
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 355 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 414
+L+ + I G L +AL SL L+L + + GA +A L L ++L+
Sbjct: 1633 SLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAVLPGLPELRKIDLSA 1692
Query: 415 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
N I GG L +++ L+++ + N G+
Sbjct: 1693 NGIGPAGGARLAESLTLCRHLEELMLGCNALGD 1725
Score = 74 (31.1 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 62 LSKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
+S PSL + L C L++ + K L + L ++L+ N + +G L + +
Sbjct: 976 MSSEPSLRSPRIRLTHCALQAQRLELLCKALGGSCRLSHLDLSGNALGDEGVALLARLLP 1035
Query: 120 NKTKLKQINVSENQFGEEGV 139
L+ +N+SEN EGV
Sbjct: 1036 GLGSLQSLNLSENHLSLEGV 1055
Score = 66 (28.3 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 18/70 (25%), Positives = 36/70 (51%)
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
L+L L A + + L + L++ LT + +S +G L + + L+++++S
Sbjct: 1471 LSLSQVNLCDASSLLLQSLLLSLSELKNFRLTSSCVSSKGLALLTSGLSHCHLLEELDLS 1530
Query: 131 ENQFGEEGVE 140
NQ G+EG +
Sbjct: 1531 NNQLGDEGTK 1540
Score = 66 (28.3 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 18/70 (25%), Positives = 36/70 (51%)
Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
L+L L A + + L + L++ LT + +S +G L + + L+++++S
Sbjct: 1471 LSLSQVNLCDASSLLLQSLLLSLSELKNFRLTSSCVSSKGLALLTSGLSHCHLLEELDLS 1530
Query: 442 ENQFGEEGVE 451
NQ G+EG +
Sbjct: 1531 NNQLGDEGTK 1540
Score = 65 (27.9 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLN 357
N L +EG +LA + L +L+ + + +N + G+ +L+ F + L HL +
Sbjct: 1020 NALGDEGVALLARLLPGLGSLQSLNLSENHLSLEGVCSLTQCFSTLRWLLHLEFS 1074
Score = 64 (27.6 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 114 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 157
L KA+ +L +++S N G+EGV + +L+ G +L L
Sbjct: 1002 LCKALGGSCRLSHLDLSGNALGDEGVALLARLLPGLGSLQSLNL 1045
Score = 64 (27.6 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKL 65
L H+++ N + G+ L+ L+ LNL++N ++ +G L Q S L
Sbjct: 1012 LSHLDLSGNALGDEGVALLARLLPGLGSLQSLNLSENHLSLEGVCSLTQCFSTL 1065
Score = 63 (27.2 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 100 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
+L+ + I G L KA++ T L+++++S NQ G G +++ ++
Sbjct: 1633 SLSKSNIDDVGCCHLSKALRAATSLEELSLSHNQIGNIGAQDLAAVL 1679
Score = 63 (27.2 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 39 KLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
+L HL+L+ N + +G L + L L SL LNL + L G S+ +
Sbjct: 1011 RLSHLDLSGNALGDEGVALLARLLPGLGSLQSLNLSENHLSLEGVCSLTQ 1060
Score = 60 (26.2 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 19 QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 78
Q G++ V + L E +L ++L+ N + KG + +A +L L+L D L
Sbjct: 861 QLGVHDVEV--LIAQLREGPQLDEVDLSGNQLKDKGCQLMAEAAPQLHITKKLDLSDNEL 918
Query: 79 KSAGASSIAKYLTDNTTLEDVNLT 102
AG + + TL +++++
Sbjct: 919 SVAGVLGVLSVVNTYQTLTELHIS 942
Score = 60 (26.2 bits), Expect = 3.7e-06, Sum P(4) = 3.7e-06
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 126
SLA L L C L + L + L++V+L+ N++ +G + +A K+
Sbjct: 852 SLA-LRLQKCQLGVHDVEVLIAQLREGPQLDEVDLSGNQLKDKGCQLMAEAAPQLHITKK 910
Query: 127 INVSENQFGEEGV 139
+++S+N+ GV
Sbjct: 911 LDLSDNELSVAGV 923
Score = 60 (26.2 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 30/130 (23%), Positives = 59/130 (45%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+LA +F ++ V++ + H+ + S +E+ R D + + PL
Sbjct: 1187 LLADLFSLCPQVQKVDL--RSLRHLTLHLRSSEEQED---RCCWFTDCGLRQEHVEPLCG 1241
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
LSK L L+L LL G + + L ++L+ N +S + L LV+A+ +
Sbjct: 1242 LLSKCEDLHQLDLSANLLGDDGLRCLLECLPKVPISGSLDLSHNSMSQESVLCLVEALPS 1301
Query: 121 KTKLKQINVS 130
+L++ +V+
Sbjct: 1302 CPRLREASVN 1311
Score = 57 (25.1 bits), Expect = 7.1e-06, Sum P(4) = 7.1e-06
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 66 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
P L ++L LK G +A+ + ++L+ NE+SV G L ++ + L
Sbjct: 878 PQLDEVDLSGNQLKDKGCQLMAEAAPQLHITKKLDLSDNELSVAGVLGVLSVVNTYQTLT 937
Query: 126 QINVS 130
++++S
Sbjct: 938 ELHIS 942
Score = 56 (24.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
L +AL L+ L+L L G + +A+ L +L+ +NL+ N +S++G L +
Sbjct: 1002 LCKALGGSCRLSHLDLSGNALGDEGVALLARLLPGLGSLQSLNLSENHLSLEGVCSLTQC 1061
Query: 118 MKNKTKLKQINVS 130
L + S
Sbjct: 1062 FSTLRWLLHLEFS 1074
Score = 55 (24.4 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 15/24 (62%), Positives = 15/24 (62%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLL 249
RL LDLS NA G GV LA LL
Sbjct: 1011 RLSHLDLSGNALGDEGVALLARLL 1034
Score = 52 (23.4 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 14/73 (19%), Positives = 37/73 (50%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
+L A ++ L+ V++ N + G +++A + + L+L+DN ++ G + +
Sbjct: 869 VLIAQLREGPQLDEVDLSGNQLKDKGCQLMAEAAPQLHITKKLDLSDNELSVAGVLGVLS 928
Query: 61 ALSKLPSLAILNL 73
++ +L L++
Sbjct: 929 VVNTYQTLTELHI 941
Score = 51 (23.0 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSC 253
L ELDLS+N G G + L L C
Sbjct: 1524 LEELDLSNNQLGDEGTKVLLGALEGKC 1550
Score = 50 (22.7 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 4 AVFKKLKT---LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
A+ K L T L+ + + + I GI+ L A +L ++ DN + + + + +
Sbjct: 713 ALSKSLPTMGSLKKLGLAGSKITAQGISHLVQALPFCPQLEEVSFQDNQLKDREVLNIVE 772
Query: 61 ALSKLPSLAILNL 73
LS LP L L+L
Sbjct: 773 VLSCLPRLQKLDL 785
Score = 49 (22.3 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 30/136 (22%), Positives = 52/136 (38%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
L F L+ L H+E + HV + +K+ R L + ++ LG
Sbjct: 1058 LTQCFSTLRWLLHLEF-SSASQHVILRG-------DKRGRDLLAAGSLPEFRAGARLGSG 1109
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
+P L +C L+ S + K L +V L+C +S Q L+ +
Sbjct: 1110 QRHVPRSFCLK--ECQLEPLSLSYLCKSLEKCPGPLEVQLSCEVLSDQSLETLLYHLPQL 1167
Query: 122 TKLKQINVSENQFGEE 137
+L + +S+ Q E
Sbjct: 1168 PQLSLLQLSQMQLPPE 1183
Score = 48 (22.0 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLN 46
+LA + L +L+ + + +N + G+ +L+ F + L HL +
Sbjct: 1029 LLARLLPGLGSLQSLNLSENHLSLEGVCSLTQCFSTLRWLLHLEFS 1074
Score = 43 (20.2 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 229 ELDLSDNAFGPIGVEGLADLLRS 251
+LDLSDN GV G+ ++ +
Sbjct: 910 KLDLSDNELSVAGVLGVLSVVNT 932
Score = 43 (20.2 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 13/65 (20%), Positives = 27/65 (41%)
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
DC L+ + L+ L ++L+ N + G L++ + +++S N
Sbjct: 1228 DCGLRQEHVEPLCGLLSKCEDLHQLDLSANLLGDDGLRCLLECLPKVPISGSLDLSHNSM 1287
Query: 135 GEEGV 139
+E V
Sbjct: 1288 SQESV 1292
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLAD 247
L+ G +L E+DLS N G + +A+
Sbjct: 874 LREGPQLDEVDLSGNQLKDKGCQLMAE 900
Score = 38 (18.4 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 227 LVELDLSDNAFGPIGVEGLADLL 249
L +LDLS N G G+ L + L
Sbjct: 1249 LHQLDLSANLLGDDGLRCLLECL 1271
>UNIPROTKB|F1P9K0 [details] [associations]
symbol:NOD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090022 "regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0071224 "cellular response to
peptidoglycan" evidence=IEA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050871
"positive regulation of B cell activation" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=IEA] [GO:0050700 "CARD
domain binding" evidence=IEA] [GO:0046330 "positive regulation of
JNK cascade" evidence=IEA] [GO:0044130 "negative regulation of
growth of symbiont in host" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032740 "positive
regulation of interleukin-17 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032701 "negative
regulation of interleukin-18 production" evidence=IEA] [GO:0032695
"negative regulation of interleukin-12 production" evidence=IEA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA] [GO:0032500 "muramyl dipeptide binding" evidence=IEA]
[GO:0032498 "detection of muramyl dipeptide" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016045
"detection of bacterium" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0006965
"positive regulation of biosynthetic process of antibacterial
peptides active against Gram-positive bacteria" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002830 "positive regulation
of type 2 immune response" evidence=IEA] [GO:0002710 "negative
regulation of T cell mediated immunity" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002367 "cytokine production
involved in immune response" evidence=IEA] [GO:0002227 "innate
immune response in mucosa" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0032496
GO:GO:0070374 GO:GO:0032755 GO:GO:0045747 GO:GO:0050731
GO:GO:0050766 GO:GO:0032720 GO:GO:0044130 GO:GO:0035419
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0043330 GO:GO:0002606 GO:GO:0032735 GO:GO:0043552
GO:GO:0051770 GO:GO:2000110 GO:GO:0032733 GO:GO:0002830
GO:GO:0032703 GO:GO:0032874 GO:GO:0060585 GO:GO:0090022
GO:GO:0002925 GO:GO:0070431 GO:GO:0032740 GO:GO:0050871
GO:GO:0034136 GeneTree:ENSGT00660000095240 GO:GO:0032500
GO:GO:0071224 GO:GO:0002367 GO:GO:0032498 GO:GO:0071608
GO:GO:0032701 GO:GO:0002710 GO:GO:2000363 OMA:QYECDEI
EMBL:AAEX03001616 Ensembl:ENSCAFT00000015589 Uniprot:F1P9K0
Length = 1013
Score = 156 (60.0 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 76/249 (30%), Positives = 115/249 (46%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITG-------CKLLSK- 277
R V L L N+ G IGVE L L S C A I C+ L K
Sbjct: 764 RPVALQLDHNSVGDIGVEQLLPCL--SVCKALYLRDNNISDRGICKLIEHALHCEQLQKL 821
Query: 278 ALHD------CYESSKKEGSPLALKV-FIA---GRNRLENEGAKMLAAVFKKLKTLERVE 327
AL + C S + LA K F+A G NR+ GA+ LA + +L+ +
Sbjct: 822 ALFNNKLTDGCAHSMARL---LACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQFLG 878
Query: 328 MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 387
N + G AL++A ++++LR L+L N I GA L L K +L L L +
Sbjct: 879 FWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCLEEN 938
Query: 388 LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
L+ G S+AK L N++L+ + L+ N I+ G L++A++ + ++ + N F
Sbjct: 939 HLQDEGVCSLAKGLERNSSLKVLKLSNNCITYLGAEGLLQALEKNDTILEVWLRGNTFS- 997
Query: 448 EGVEEMEKL 456
+EEME+L
Sbjct: 998 --LEEMERL 1004
Score = 130 (50.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 40/134 (29%), Positives = 64/134 (47%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+ + N I G AL++ N L+ L N + +GA L +AL SL L+L
Sbjct: 849 LRLGNNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLSLV 908
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN-- 132
+ S GA ++A L N LE++ L N + +G L K ++ + LK + +S N
Sbjct: 909 GNDIGSVGARALALMLEKNVALEELCLEENHLQDEGVCSLAKGLERNSSLKVLKLSNNCI 968
Query: 133 -QFGEEGV-EEMEK 144
G EG+ + +EK
Sbjct: 969 TYLGAEGLLQALEK 982
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 40/126 (31%), Positives = 67/126 (53%)
Query: 20 NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
N + G AL++A +++ LR L+L N I GA L L K +L L L + L+
Sbjct: 882 NKVGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCLEENHLQ 941
Query: 80 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
G S+AK L N++L+ + L+ N I+ G L++A++ + ++ + N F +
Sbjct: 942 DEGVCSLAKGLERNSSLKVLKLSNNCITYLGAEGLLQALEKNDTILEVWLRGNTFS---L 998
Query: 140 EEMEKL 145
EEME+L
Sbjct: 999 EEMERL 1004
Score = 106 (42.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/139 (23%), Positives = 68/139 (48%)
Query: 9 LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
L + + + N I GI L + ++L+ L L +N +T A + + L+ +
Sbjct: 787 LSVCKALYLRDNNISDRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSMARLLACKQNF 846
Query: 69 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
L LG+ + +AGA ++A+ L NT+L+ + N++ +G L +A+ + L+ ++
Sbjct: 847 LALRLGNNRITAAGAQALAEGLRANTSLQFLGFWGNKVGDEGAQALAEALGDHQSLRWLS 906
Query: 129 VSENQFGEEGVEEMEKLMK 147
+ N G G + +++
Sbjct: 907 LVGNDIGSVGARALALMLE 925
Score = 78 (32.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
+AL+ N L++EG LA ++ +L+ +++ N I ++G L A E+N +
Sbjct: 928 VALEELCLEENHLQDEGVCSLAKGLERNSSLKVLKLSNNCITYLGAEGLLQALEKNDTIL 987
Query: 353 HLNLNDNTITYKGAIPLGQALSKL 376
+ L NT + + L Q ++L
Sbjct: 988 EVWLRGNTFSLEEMERLSQKDTRL 1011
Score = 46 (21.3 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 113 DLVKAMKNKTKLKQINVSENQFGEEGVE-EMEKLMKSFGMAAALV 156
D V A+ K +IN+ F EEG+E + K + G+A L+
Sbjct: 401 DAVSALLRKYLRLEINLKG--FSEEGIELYLRKCHREPGVADRLI 443
>UNIPROTKB|F1RMM7 [details] [associations]
symbol:LOC100519960 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104141 EMBL:FP102633
Ensembl:ENSSSCT00000003671 OMA:CLTSVAC Uniprot:F1RMM7
Length = 1061
Score = 121 (47.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 64/229 (27%), Positives = 100/229 (43%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYES 285
RLV L DNA GV L + L++ C A C +S+AL C S
Sbjct: 815 RLVSL--VDNALKDQGVMVLCEALKNPDC-ALETLLLMHSCLTSVACDHISQALL-CNSS 870
Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITA--LS 342
L + G LE++G K L V K +L+ + + G Y I L+
Sbjct: 871 ---------LTLLDLGLTYLEDDGVKSLCQVLKHPDCSLQHLWLM--GCYLTSICCADLA 919
Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSIAKY 400
+N+ L+ L L N + GA L +AL K P + NLG C L SA +A
Sbjct: 920 AVLTQNEKLKTLKLGSNKLYDAGAKQLCEAL-KHPHCKLENLGLEMCDLTSACCEDLASA 978
Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEE 448
LT +L +NL ++ + G + L A+ + + L+++ +++ + EE
Sbjct: 979 LTICRSLRTLNLEWIKLDLDGAVLLCDALTHPECGLQRLGLNKCSYDEE 1027
Score = 83 (34.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 37 NKKLRHLNLNDNTITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
N +++LNL +++ L +AL + S+ L LG C + +A L N
Sbjct: 754 NPHMKYLNLYGTSLSCMDVRQLCEALRHPMCSIESLVLGKCDITEDSCEDLASVLVHNKK 813
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKN 120
L V+L N + QG + L +A+KN
Sbjct: 814 LRLVSLVDNALKDQGVMVLCEALKN 838
Score = 48 (22.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 17/84 (20%), Positives = 38/84 (45%)
Query: 66 PSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
P + LNL L + + L ++E + L +I+ DL + + KL
Sbjct: 755 PHMKYLNLYGTSLSCMDVRQLCEALRHPMCSIESLVLGKCDITEDSCEDLASVLVHNKKL 814
Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
+ +++ +N ++GV + + +K+
Sbjct: 815 RLVSLVDNALKDQGVMVLCEALKN 838
>UNIPROTKB|E1BR67 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002606 "positive regulation of dendritic cell antigen
processing and presentation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0016045 "detection
of bacterium" evidence=IEA] [GO:0016323 "basolateral plasma
membrane" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050700 "CARD domain binding"
evidence=IEA] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0006917 GO:GO:0035556 GO:GO:0043123 GO:GO:0070374
GO:GO:0046330 GO:GO:0016323 GO:GO:0032755 GO:GO:0006919
GO:GO:0051092 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0032760 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606
CTD:10392 KO:K08727 GeneTree:ENSGT00660000095240 EMBL:AADN02001205
IPI:IPI00589517 RefSeq:XP_418777.2 UniGene:Gga.40185
ProteinModelPortal:E1BR67 Ensembl:ENSGALT00000018808 GeneID:420677
KEGG:gga:420677 OMA:MFEIGMW NextBio:20823559 Uniprot:E1BR67
Length = 951
Score = 159 (61.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 52/184 (28%), Positives = 88/184 (47%)
Query: 271 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 330
G K ++K + +C S E +K+ G N++ +EG K LA +K T+ + M
Sbjct: 770 GAKYVAKLIEEC---SSLE----YVKI---GANKITSEGGKCLAQAIQKSTTMFEIGMWG 819
Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 390
N + G A +DA + L +++L N IT +G + +AL S+ I L L
Sbjct: 820 NQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELD 879
Query: 391 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
A S A+ L N L + L N+I+ +G L +A+K T +K++ ++ N +E
Sbjct: 880 DEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEA 939
Query: 451 EEME 454
+ E
Sbjct: 940 KAFE 943
Score = 149 (57.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/156 (22%), Positives = 79/156 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + GA++L K + + + + N I +G ++ EE +L ++ + N IT
Sbjct: 736 NQITDHGARILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEECSSLEYVKIGANKIT 795
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+G L QA+ K ++ + + + GA + A L ++ L +V+L N I+ +GG
Sbjct: 796 SEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGG 855
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+ +A+++ +K +++N+ +E +++K
Sbjct: 856 KSIAEALQHNDSVKIFWLTKNELDDEAAMSFAEMLK 891
Score = 144 (55.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 39/156 (25%), Positives = 79/156 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N++ + GAK +A + ++ +LE V++ N I G L+ A +++ + + + N +
Sbjct: 764 NQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVG 823
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+GA AL P L ++L + + G SIA+ L N +++ LT NE+ +
Sbjct: 824 DEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDEAA 883
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+ + +K KL + + +NQ +GV+ + + +K
Sbjct: 884 MSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALK 919
Score = 144 (55.7 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 39/134 (29%), Positives = 70/134 (52%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+++ N I G+ L F KL + L+ N IT GA L + LSK ++ L L
Sbjct: 706 LDLDNNNINDYGVKQLLPCFS---KLAVIRLSVNQITDHGARILYEELSKYQIVSYLGLY 762
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ + GA +AK + + ++LE V + N+I+ +GG L +A++ T + +I + NQ
Sbjct: 763 NNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQV 822
Query: 135 GEEGVEEMEKLMKS 148
G+EG + +++
Sbjct: 823 GDEGAKAFADALRN 836
Score = 140 (54.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 38/134 (28%), Positives = 70/134 (52%)
Query: 326 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 385
+++ N I G+ L F + L + L+ N IT GA L + LSK ++ L L
Sbjct: 706 LDLDNNNINDYGVKQLLPCFSK---LAVIRLSVNQITDHGARILYEELSKYQIVSYLGLY 762
Query: 386 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 445
+ + GA +AK + + ++LE V + N+I+ +GG L +A++ T + +I + NQ
Sbjct: 763 NNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQV 822
Query: 446 GEEGVEEMEKLMKS 459
G+EG + +++
Sbjct: 823 GDEGAKAFADALRN 836
Score = 131 (51.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 31/140 (22%), Positives = 70/140 (50%)
Query: 8 KLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS 67
K + + ++ + N I +G ++ EE L ++ + N IT +G L QA+ K +
Sbjct: 752 KYQIVSYLGLYNNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTT 811
Query: 68 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
+ + + + GA + A L ++ L +V+L N I+ +GG + +A+++ +K
Sbjct: 812 MFEIGMWGNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIF 871
Query: 128 NVSENQFGEEGVEEMEKLMK 147
+++N+ +E +++K
Sbjct: 872 WLTKNELDDEAAMSFAEMLK 891
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 40/142 (28%), Positives = 68/142 (47%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA +K T+ + M N + G A +DA + +L +++L N IT +G + +A
Sbjct: 802 LAQAIQKSTTMFEIGMWGNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEA 861
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L S+ I L L A S A+ L N L + L N+I+ +G L +A+K
Sbjct: 862 LQHNDSVKIFWLTKNELDDEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKEN 921
Query: 122 TKLKQINVSENQFGEEGVEEME 143
T +K++ ++ N +E + E
Sbjct: 922 TAIKEVCLNGNLISQEEAKAFE 943
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 35/156 (22%), Positives = 76/156 (48%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N + + G K L F KL + R+ + N I G L + + + + +L L +N IT
Sbjct: 711 NNINDYGVKQLLPCFSKLAVI-RLSV--NQITDHGARILYEELSKYQIVSYLGLYNNQIT 767
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
GA + + + + SL + +G + S G +A+ + +TT+ ++ + N++ +G
Sbjct: 768 DIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGA 827
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
A++N +L ++++ N EG + + + ++
Sbjct: 828 KAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQ 863
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 35/146 (23%), Positives = 73/146 (50%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+A + ++ +LE+V++ N I G L+ A +++ + + + N + +GA A
Sbjct: 774 VAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGAKAFADA 833
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L P L ++L + + G SIA+ L N +++ LT NE+ + + + +K
Sbjct: 834 LRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDEAAMSFAEMLKIN 893
Query: 122 TKLKQINVSENQFGEEGVEEMEKLMK 147
KL + + +NQ +GV+ + + +K
Sbjct: 894 KKLVHLWLIQNQITAKGVKYLSEALK 919
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+G+ +K + L C SA S+I+ + ++L N I+ G L+
Sbjct: 665 VGKLAAKRMHANYIKLTYCNAYSADCSAISFVVHHFQKHLALDLDNNNINDYGVKQLLPC 724
Query: 118 MKNKTKLKQINVSENQFGEEGVEEM-EKLMK 147
+KL I +S NQ + G + E+L K
Sbjct: 725 F---SKLAVIRLSVNQITDHGARILYEELSK 752
Score = 39 (18.8 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
LK +LV L L N GV+ L++ L+ +
Sbjct: 890 LKINKKLVHLWLIQNQITAKGVKYLSEALKEN 921
>UNIPROTKB|Q96MN2 [details] [associations]
symbol:NLRP4 "NACHT, LRR and PYD domains-containing protein
4" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 HOGENOM:HOG000294064
HOVERGEN:HBG063656 eggNOG:NOG150642 OrthoDB:EOG4N04DB EMBL:AF442488
EMBL:AY072792 EMBL:AF479747 EMBL:AF482706 EMBL:AK056688
EMBL:BC016443 EMBL:BC050326 IPI:IPI00151977 IPI:IPI00218614
IPI:IPI00218615 RefSeq:NP_604393.2 UniGene:Hs.631533 PDB:4EWI
PDBsum:4EWI ProteinModelPortal:Q96MN2 SMR:Q96MN2 IntAct:Q96MN2
STRING:Q96MN2 PhosphoSite:Q96MN2 DMDM:148887404 PaxDb:Q96MN2
PRIDE:Q96MN2 DNASU:147945 Ensembl:ENST00000301295 GeneID:147945
KEGG:hsa:147945 UCSC:uc002qmd.4 UCSC:uc002qmf.3 UCSC:uc010etf.3
CTD:147945 GeneCards:GC19P056347 H-InvDB:HIX0015485 HGNC:HGNC:22943
HPA:HPA042561 MIM:609645 neXtProt:NX_Q96MN2 PharmGKB:PA162397947
InParanoid:Q96MN2 OMA:CWHHICS PhylomeDB:Q96MN2 ChiTaRS:NLRP4
GenomeRNAi:147945 NextBio:85776 Bgee:Q96MN2 CleanEx:HS_NLRP4
CleanEx:HS_PAN2 Genevestigator:Q96MN2 GermOnline:ENSG00000160505
Uniprot:Q96MN2
Length = 994
Score = 129 (50.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 45/149 (30%), Positives = 73/149 (48%)
Query: 303 NRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N L++EG K L K L+ + + + I G L+ A N+NL+ L + N I
Sbjct: 817 NVLKDEGLKTLCEALKHPDCCLDSLCLVKCFITAAGCEDLASALISNQNLKILQIGCNEI 876
Query: 362 TYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
G L +AL+ L IL L +C L S +A LT + TL+ +NLT N +
Sbjct: 877 GDVGVQLLCRALTHTDCRLEILGLEECGLTSTCCKDLASVLTCSKTLQQLNLTLNTLDHT 936
Query: 421 GGLDLVKAMKN-KTKLKQINVSENQFGEE 448
G + L +A+++ + L+ + + + F EE
Sbjct: 937 GVVVLCEALRHPECALQVLGLRKTDFDEE 965
Score = 73 (30.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI-LNLGDCLLKSAGASSIAK 88
L+ NKKL +LN++ N + G L +AL ++ + L L C L I++
Sbjct: 743 LAGLLTNNKKLTYLNVSCNQLD-TGVPLLCEALCSPDTVLVYLMLAFCHLSEQCCEYISE 801
Query: 89 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L N ++ ++L+ N + +G L +A+K+
Sbjct: 802 MLLRNKSVRYLDLSANVLKDEGLKTLCEALKH 833
Score = 55 (24.4 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 106
L + LA++N C L +A LT+N L +N++CN++
Sbjct: 718 LNYPAGNVKELALVN---CHLSPIDCEVLAGLLTNNKKLTYLNVSCNQL 763
>DICTYBASE|DDB_G0290439 [details] [associations]
symbol:gacW "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0290439 GO:GO:0005737 GO:GO:0007165 GO:GO:0005096
GO:GO:0043547 Gene3D:1.10.555.10 SUPFAM:SSF48350
GenomeReviews:CM000154_GR eggNOG:NOG295787 EMBL:AAFI02000163
RefSeq:XP_635754.1 ProteinModelPortal:Q54G18
EnsemblProtists:DDB0233787 GeneID:8627673 KEGG:ddi:DDB_G0290439
InParanoid:Q54G18 OMA:ENIAICW Uniprot:Q54G18
Length = 1115
Score = 140 (54.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 40/145 (27%), Positives = 73/145 (50%)
Query: 304 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTI 361
+L NE +LA VFK+ +L+++ + + I L ENK +L H+NLN+N++
Sbjct: 221 KLSNEDLNLLAEVFKENSSLQQLTITNSQASKEPIITLLQNVAENKALHLSHINLNNNSL 280
Query: 362 TYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNT----TLEDVNLTCNE 416
KG + LG ++ + L LN+ + G ++ LT N ++ +N++ N+
Sbjct: 281 ENKGILTLGSSIQTFSNGLTYLNIENTSCSGKGLEAMFGCLTANNVVCGSMTHLNISNNK 340
Query: 417 ISVQGGLDLVKAMKNKTKLKQINVS 441
+ G L K + T L+Q+ +S
Sbjct: 341 LESYGTNGLCKFLSKATALQQLLMS 365
Score = 123 (48.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 37/137 (27%), Positives = 67/137 (48%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLR--HLNLNDNTITYKGAIPL 58
+LA VFK+ +L+ + + + I L ENK L H+NLN+N++ KG + L
Sbjct: 229 LLAEVFKENSSLQQLTITNSQASKEPIITLLQNVAENKALHLSHINLNNNSLENKGILTL 288
Query: 59 GQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNT----TLEDVNLTCNEISVQGGLD 113
G ++ + L LN+ + G ++ LT N ++ +N++ N++ G
Sbjct: 289 GSSIQTFSNGLTYLNIENTSCSGKGLEAMFGCLTANNVVCGSMTHLNISNNKLESYGTNG 348
Query: 114 LVKAMKNKTKLKQINVS 130
L K + T L+Q+ +S
Sbjct: 349 LCKFLSKATALQQLLMS 365
Score = 80 (33.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 40/194 (20%), Positives = 85/194 (43%)
Query: 273 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
+LL Y K S + F ++ E + + FK++ L+ V + +
Sbjct: 361 QLLMSNTSPVYSFLKTSSSSIQTLDFSGNKSTTTKESVIDILSFFKQMSHLQTVNLSRIQ 420
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL-GDCLLKS 391
+ L ++L++N + G I L + + +L L++ G+ KS
Sbjct: 421 TTPDDLKLLFSPATSLLKCSSVDLSENDLGDGGIIKLCEIMYPNSNLHHLSIDGNFKTKS 480
Query: 392 ---AGA-SSIAKYLTDNTTLEDVNLTCN--EISVQGGLD--LVKAMKNKTKLKQINVSEN 443
A A ++ + DNT++E ++L + ++G L L+ +KN++ +K +++S N
Sbjct: 481 KLRARAIEALINLIDDNTSIESLSLASGSGKYQLKGDLMPLLLSLLKNQSLVK-LDISGN 539
Query: 444 QFGEEGVEEMEKLM 457
G+ G + K++
Sbjct: 540 GVGDSGALAVSKIL 553
Score = 77 (32.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 338 ITALSDAFEENKNLRHLNLNDNTITY--KGAI-PLGQALSKLPSLAILNLGDCLLKSAGA 394
I AL + ++N ++ L+L + Y KG + PL +L K SL L++ + +GA
Sbjct: 487 IEALINLIDDNTSIESLSLASGSGKYQLKGDLMPLLLSLLKNQSLVKLDISGNGVGDSGA 546
Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 427
+++K L N TL+ + N+ S L ++K
Sbjct: 547 LAVSKILWKNQTLKSLKCDGNDFSYTA-LKMIK 578
Score = 75 (31.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 36/145 (24%), Positives = 63/145 (43%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT-------- 362
K+L + L V++ +N + GI L + N NL HL+++ N T
Sbjct: 427 KLLFSPATSLLKCSSVDLSENDLGDGGIIKLCEIMYPNSNLHHLSIDGNFKTKSKLRARA 486
Query: 363 YKGAIPLGQALSKLPSLAILN-LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 421
+ I L + + SL++ + G LK + L N +L ++++ N + G
Sbjct: 487 IEALINLIDDNTSIESLSLASGSGKYQLKG-DLMPLLLSLLKNQSLVKLDISGNGVGDSG 545
Query: 422 GLDLVKAM-KNKTKLKQINVSENQF 445
L + K + KN+T LK + N F
Sbjct: 546 ALAVSKILWKNQT-LKSLKCDGNDF 569
Score = 72 (30.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/187 (20%), Positives = 84/187 (44%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
+DLS+N G G+ L +++ + + + ++ +++ E
Sbjct: 442 VDLSENDLGDGGIIKLCEIMYPNSNLHHLSIDGNFKTKSKLRARAIEALINLIDDNTSIE 501
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
LA +G+ +L+ + +L ++ K ++L ++++ NG+ G A+S +N+
Sbjct: 502 SLSLASG---SGKYQLKGDLMPLLLSLLKN-QSLVKLDISGNGVGDSGALAVSKILWKNQ 557
Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNL--GDC--LLKS-AGASSIAKYLTD 403
L+ L + N +Y + ++ + SL IL L D +LK+ + SS K L
Sbjct: 558 TLKSLKCDGNDFSYTALKMIKCSIRRNEKSLTILQLPLSDISTILKNDSNGSSHEKILK- 616
Query: 404 NTTLEDV 410
T++D+
Sbjct: 617 --TIQDI 621
>MGI|MGI:1924108 [details] [associations]
symbol:Nlrp14 "NLR family, pyrin domain containing 14"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
MGI:MGI:1924108 GO:GO:0007275 GO:GO:0005524 GO:GO:0030154
GO:GO:0007283 InterPro:IPR007111 PROSITE:PS50837 eggNOG:NOG82860
HOGENOM:HOG000294064 HOVERGEN:HBG063656 CTD:338323
OrthoDB:EOG4HDSSR EMBL:AY673647 EMBL:BC141199 EMBL:AY596199
IPI:IPI00460862 RefSeq:NP_001002894.2 UniGene:Mm.35644 HSSP:P10775
ProteinModelPortal:Q6B966 SMR:Q6B966 STRING:Q6B966
PhosphoSite:Q6B966 PRIDE:Q6B966 Ensembl:ENSMUST00000084763
GeneID:76858 KEGG:mmu:76858 GeneTree:ENSGT00700000104427
InParanoid:B2RUL1 OMA:FLEIPLC NextBio:345943 Bgee:Q6B966
CleanEx:MM_NLRP14 Genevestigator:Q6B966 Uniprot:Q6B966
Length = 993
Score = 149 (57.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 62/215 (28%), Positives = 99/215 (46%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L+T LV L+LS N GV+ L ++L + + GCK+LS AL
Sbjct: 683 LQTNRSLVFLNLSLNNLSNDGVKSLCEVLENPNS-SLERLALASCGLTKAGCKVLSSAL- 740
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
+ K + L L N LE+EG K+L+ K + TL+ + + +G
Sbjct: 741 ----TKSKRLTHLCLS-----DNVLEDEGIKLLSHTLKHPQCTLQSLVLRSCSFTPIGSE 791
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSI 397
LS A N++L HL+L N + G L +L + P +L L L C+L S +
Sbjct: 792 HLSTALLHNRSLVHLDLGQNKLADNGVKLLCHSLQQ-PHCNLQELELMSCVLTSKACGDL 850
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLV-KAMKN 431
A L +N+ L ++L N + GL+++ A++N
Sbjct: 851 ASVLVNNSNLWSLDLGHNILD-DAGLNILCDALRN 884
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 58/225 (25%), Positives = 100/225 (44%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + ++ LDL + G G++ L + L+ C + C+ LS AL
Sbjct: 626 LASNKKVTHLDLKETDLGVNGLKTLCEALKCKGC-KLRVLRLASCDLNVARCQKLSNAL- 683
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGIT 339
++++ S + L + + N L N+G K L V + + LER+ + G+ G
Sbjct: 684 ---QTNR---SLVFLNLSL---NNLSNDGVKSLCEVLENPNSSLERLALASCGLTKAGCK 734
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSI 397
LS A ++K L HL L+DN + +G L L K P +L L L C G+ +
Sbjct: 735 VLSSALTKSKRLTHLCLSDNVLEDEGIKLLSHTL-KHPQCTLQSLVLRSCSFTPIGSEHL 793
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 442
+ L N +L ++L N+++ G VK + + + N+ E
Sbjct: 794 STALLHNRSLVHLDLGQNKLADNG----VKLLCHSLQQPHCNLQE 834
Score = 102 (41.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/153 (22%), Positives = 73/153 (47%)
Query: 309 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTITYKGAI 367
G++ L+ ++L +++ QN + G+ L + ++ + NL+ L L +T K
Sbjct: 789 GSEHLSTALLHNRSLVHLDLGQNKLADNGVKLLCHSLQQPHCNLQELELMSCVLTSKACG 848
Query: 368 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLV 426
L L +L L+LG +L AG + + L + N ++ + L ++ DL+
Sbjct: 849 DLASVLVNNSNLWSLDLGHNILDDAGLNILCDALRNPNCHVQRLGLENCGLTPGCCQDLL 908
Query: 427 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ N + Q+N+ +N E ++ + K+++S
Sbjct: 909 GILSNNKSVIQMNLMKNALDHESIKNLCKVLRS 941
Score = 101 (40.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 37 NKKLRHLNLNDNTITYKGAIPLGQALS-KLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 95
NKK+ HL+L + + G L +AL K L +L L C L A ++ L N +
Sbjct: 629 NKKVTHLDLKETDLGVNGLKTLCEALKCKGCKLRVLRLASCDLNVARCQKLSNALQTNRS 688
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEMEK-LMKS 148
L +NL+ N +S G L + ++N + L+++ ++ + G + + L KS
Sbjct: 689 LVFLNLSLNNLSNDGVKSLCEVLENPNSSLERLALASCGLTKAGCKVLSSALTKS 743
Score = 101 (40.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 35/140 (25%), Positives = 65/140 (46%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFE-ENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
K + H+++ + + G+ L +A + + KLR L L + L AL SL
Sbjct: 630 KKVTHLDLKETDLGVNGLKTLCEALKCKGCKLRVLRLASCDLNVARCQKLSNALQTNRSL 689
Query: 69 AILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 127
LNL L + G S+ + L + N++LE + L ++ G L A+ +L +
Sbjct: 690 VFLNLSLNNLSNDGVKSLCEVLENPNSSLERLALASCGLTKAGCKVLSSALTKSKRLTHL 749
Query: 128 NVSENQFGEEGVEEMEKLMK 147
+S+N +EG++ + +K
Sbjct: 750 CLSDNVLEDEGIKLLSHTLK 769
Score = 96 (38.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 54/237 (22%), Positives = 101/237 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL- 279
L RL L LSDN G++ L+ L+ C I G + LS AL
Sbjct: 740 LTKSKRLTHLCLSDNVLEDEGIKLLSHTLKHPQCTLQSLVLRSCSFTPI-GSEHLSTALL 798
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGI 338
H+ S + L + G+N+L + G K+L ++ L+ +E+ +
Sbjct: 799 HN--------RSLVHLDL---GQNKLADNGVKLLCHSLQQPHCNLQELELMSCVLTSKAC 847
Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASS 396
L+ N NL L+L N + G L AL P+ + LG +C L
Sbjct: 848 GDLASVLVNNSNLWSLDLGHNILDDAGLNILCDALRN-PNCHVQRLGLENCGLTPGCCQD 906
Query: 397 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEE 452
+ L++N ++ +NL N + + +L K +++ T K++ + + + + ++ +++
Sbjct: 907 LLGILSNNKSVIQMNLMKNALDHESIKNLCKVLRSPTCKMEFLALDKKEILKKKIKK 963
Score = 38 (18.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 89 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVS 130
+L N + ++L ++ V G L +A+K K KL+ + ++
Sbjct: 625 FLASNKKVTHLDLKETDLGVNGLKTLCEALKCKGCKLRVLRLA 667
>DICTYBASE|DDB_G0282605 [details] [associations]
symbol:DDB_G0282605 "Rho GTPase domain containing
protein" species:44689 "Dictyostelium discoideum" [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 Pfam:PF00071
dictyBase:DDB_G0282605 GO:GO:0005525 GO:GO:0007264
EMBL:AAFI02000047 eggNOG:KOG4308 RefSeq:XP_640151.1
ProteinModelPortal:Q54S88 EnsemblProtists:DDB0233293 GeneID:8623689
KEGG:ddi:DDB_G0282605 InParanoid:Q54S88 OMA:QWIPEIE Uniprot:Q54S88
Length = 552
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 41/146 (28%), Positives = 73/146 (50%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 364
L +EG K ++ + + +++ N I +GI L + E N+ L L L++N I +
Sbjct: 47 LGDEGVKTISKALGQQAIVSSLDLSSNSITDIGIKHLCEGIESNRYLLFLKLDNNPIGDQ 106
Query: 365 GAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 423
G L Q+L SK L L + +C + + L+ N TLE ++L N+IS +G +
Sbjct: 107 GLKLLCQSLKSKQCVLKSLYISECDITGKSMEYLVDALSVNHTLETIHLNSNKISNEGAI 166
Query: 424 DLVKAMKNKTKLKQINVSENQFGEEG 449
L K + ++LK +++ G+ G
Sbjct: 167 ILSKLINGSSRLKNLSLFFCGIGDAG 192
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 37/125 (29%), Positives = 64/125 (51%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNL 73
+++ N I +GI L + E N+ L L L++N I +G L Q+L SK L L +
Sbjct: 68 LDLSSNSITDIGIKHLCEGIESNRYLLFLKLDNNPIGDQGLKLLCQSLKSKQCVLKSLYI 127
Query: 74 GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 133
+C + + L+ N TLE ++L N+IS +G + L K + ++LK +++
Sbjct: 128 SECDITGKSMEYLVDALSVNHTLETIHLNSNKISNEGAIILSKLINGSSRLKNLSLFFCG 187
Query: 134 FGEEG 138
G+ G
Sbjct: 188 IGDAG 192
Score = 94 (38.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 44/185 (23%), Positives = 83/185 (44%)
Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N + ++G K+L K K L+ + + + I + L DA N L ++LN N I
Sbjct: 101 NPIGDQGLKLLCQSLKSKQCVLKSLYISECDITGKSMEYLVDALSVNHTLETIHLNSNKI 160
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED--VNLTCNEISV 419
+ +GAI L + ++ L L+L C + AGA++ + ++ + LT +
Sbjct: 161 SNEGAIILSKLINGSSRLKNLSLFFCGIGDAGANAFLHQFENPEFIKYRFLALTIKGNKI 220
Query: 420 QGGL--DLVKAM---KNKTKLKQINVSENQFGEEGVE--------EMEKLMKSFGMAAAL 466
G+ + K + KN K +++ + ++ V+ EMEK M S + +
Sbjct: 221 NTGIIESINKCLIGKKNHIKTERMKAEHQKMIDDQVKLKMKTVNLEMEKKMNSIQLESKK 280
Query: 467 VLEDD 471
LE++
Sbjct: 281 KLEEE 285
Score = 68 (29.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 21/84 (25%), Positives = 42/84 (50%)
Query: 65 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
L L +NLGD G +I+K L + ++L+ N I+ G L + +++ L
Sbjct: 39 LIKLENINLGD-----EGVKTISKALGQQAIVSSLDLSSNSITDIGIKHLCEGIESNRYL 93
Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
+ + N G++G++ + + +KS
Sbjct: 94 LFLKLDNNPIGDQGLKLLCQSLKS 117
>UNIPROTKB|Q8IZ02 [details] [associations]
symbol:LRRC34 "Leucine-rich repeat-containing protein 34"
species:9606 "Homo sapiens" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AC078795
EMBL:BC032841 IPI:IPI00217826 RefSeq:NP_001166250.1
RefSeq:NP_699184.2 UniGene:Hs.591289 ProteinModelPortal:Q8IZ02
SMR:Q8IZ02 PhosphoSite:Q8IZ02 DMDM:296434572 PRIDE:Q8IZ02
Ensembl:ENST00000316515 GeneID:151827 KEGG:hsa:151827 CTD:151827
GeneCards:GC03M169511 HGNC:HGNC:28408 HPA:HPA035747
neXtProt:NX_Q8IZ02 PharmGKB:PA142671522 eggNOG:NOG309390
HOGENOM:HOG000007976 HOVERGEN:HBG080754 InParanoid:Q8IZ02
PhylomeDB:Q8IZ02 GenomeRNAi:151827 NextBio:86795
ArrayExpress:Q8IZ02 Bgee:Q8IZ02 CleanEx:HS_LRRC34
Genevestigator:Q8IZ02 GermOnline:ENSG00000171757 Uniprot:Q8IZ02
Length = 419
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 60/228 (26%), Positives = 110/228 (48%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L+ L+ L+L N GP G E +A +L + +TG K+ +K
Sbjct: 134 LQKQLNLIYLNLMFNDIGPEGGELIAKVLHKN---------RTLKYLRMTGNKIENKG-G 183
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
+ + + S L K+ + G LE E + + K+ L + M ++ I + GI
Sbjct: 184 MFFAAMLQINSSLE-KLDL-GDCDLE-ESTVHVGRMLKENHCLVALHMCKHDIKNSGIQQ 240
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
L DA N +LR+L+++ N IT+ G + L L +L +++L +++AGA+ +++
Sbjct: 241 LCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGANYLSET 300
Query: 401 LTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 447
LT N +L+ +++ N I +G + L ++MK I + N+F E
Sbjct: 301 LTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLTFSHIYIWGNKFDE 348
Score = 143 (55.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 38/133 (28%), Positives = 72/133 (54%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
+ K+ L + M ++ I + GI L DA N LR+L+++ N IT+ G + L L
Sbjct: 216 MLKENHCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKS 275
Query: 65 LPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
+L +++L +++AGA+ +++ LT N +L+ +++ N I +G + L ++MK
Sbjct: 276 NTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLT 335
Query: 124 LKQINVSENQFGE 136
I + N+F E
Sbjct: 336 FSHIYIWGNKFDE 348
Score = 143 (55.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 39/157 (24%), Positives = 81/157 (51%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N + EG +++A V K +TL+ + M N I + G + + N +L L+L D +
Sbjct: 148 NDIGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLE 207
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
+ + +G+ L + L L++ +K++G + L N++L ++++CN+I+ G
Sbjct: 208 -ESTVHVGRMLKENHCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGM 266
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
+ L +K+ T L+ I++S N+ G + + + S
Sbjct: 267 VYLADVLKSNTTLEVIDLSFNRIENAGANYLSETLTS 303
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/148 (24%), Positives = 76/148 (51%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQ 60
++A V K +TL+++ M N I + G + + N L L+L D + + + +G+
Sbjct: 157 LIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLE-ESTVHVGR 215
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L + L L++ +K++G + L N++L ++++CN+I+ G + L +K+
Sbjct: 216 MLKENHCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKS 275
Query: 121 KTKLKQINVSENQFGEEGVEEMEKLMKS 148
T L+ I++S N+ G + + + S
Sbjct: 276 NTTLEVIDLSFNRIENAGANYLSETLTS 303
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/159 (25%), Positives = 76/159 (47%)
Query: 301 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
G N L + GA A + +K L + + N I G ++ +N+ L++L + N
Sbjct: 118 GYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMTGNK 177
Query: 361 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
I KG + L SL L+LGDC L+ + + + L +N L +++ ++I
Sbjct: 178 IENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVH-VGRMLKENHCLVALHMCKHDIKNS 236
Query: 421 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
G L A+ + L+ ++VS N+ +G+ + ++KS
Sbjct: 237 GIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKS 275
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMP----QNGIYHVGITALSDAFEENKNLRHLNLND 358
N++EN+G AA+ + +LE++++ + HVG +EN L L++
Sbjct: 176 NKIENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVHVG-----RMLKENHCLVALHMCK 230
Query: 359 NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
+ I G L AL SL L++ + G +A L NTTLE ++L+ N I
Sbjct: 231 HDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIE 290
Query: 419 VQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 459
G L + + + + LK ++V N EG+ + + MK+
Sbjct: 291 NAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKT 332
Score = 119 (46.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 36/146 (24%), Positives = 71/146 (48%)
Query: 3 AAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL 62
A + +K L ++ + N I G ++ +N+ L++L + N I KG + L
Sbjct: 131 AKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAML 190
Query: 63 SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
SL L+LGDC L+ + + + L +N L +++ ++I G L A+ +
Sbjct: 191 QINSSLEKLDLGDCDLEESTVH-VGRMLKENHCLVALHMCKHDIKNSGIQQLCDALYLNS 249
Query: 123 KLKQINVSENQFGEEGVEEMEKLMKS 148
L+ ++VS N+ +G+ + ++KS
Sbjct: 250 SLRYLDVSCNKITHDGMVYLADVLKS 275
Score = 43 (20.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/117 (25%), Positives = 41/117 (35%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
LD+S N G+ LAD+L+S+ G LS+ L S K
Sbjct: 254 LDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENA--GANYLSETLTSHNRSLK-- 309
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFE 346
AL V N +E EG L+ K T + + N A SD +
Sbjct: 310 ----ALSVV---SNNIEGEGLVALSQSMKTNLTFSHIYIWGNKFDEATCIAYSDLIQ 359
>TAIR|locus:2083028 [details] [associations]
symbol:AT3G06000 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC013454 KO:K14319 IPI:IPI00516588
RefSeq:NP_187251.1 UniGene:At.53197 ProteinModelPortal:Q9SFG4
SMR:Q9SFG4 PRIDE:Q9SFG4 EnsemblPlants:AT3G06000.1 GeneID:819771
KEGG:ath:AT3G06000 TAIR:At3g06000 eggNOG:NOG255239
HOGENOM:HOG000153458 InParanoid:Q9SFG4 OMA:ETCTHIK PhylomeDB:Q9SFG4
ProtClustDB:CLSN2915399 Genevestigator:Q9SFG4 Uniprot:Q9SFG4
Length = 211
Score = 138 (53.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 317 FKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSK 375
F L + + + + G AL +A + + +L+ + + N ITY+ A + L+
Sbjct: 33 FSSFSFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEAATAIAVCLAA 92
Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
L LNL + LK G I K + D LE V+++ N++ +G L L + + K
Sbjct: 93 KRHLKKLNLSENDLKDEGCVEIVKSMED-WELEYVDMSYNDLRREGALRLARVVVKKGSF 151
Query: 436 KQINVSENQFGEEGVEEME 454
K +N+ N +G+EE++
Sbjct: 152 KMLNIDGNMISLKGIEEIK 170
Score = 137 (53.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/139 (26%), Positives = 66/139 (47%)
Query: 6 FKKLKTLEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSK 64
F L + + + + G AL +A + + L+ + + N ITY+ A + L+
Sbjct: 33 FSSFSFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEAATAIAVCLAA 92
Query: 65 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
L LNL + LK G I K + D LE V+++ N++ +G L L + + K
Sbjct: 93 KRHLKKLNLSENDLKDEGCVEIVKSMED-WELEYVDMSYNDLRREGALRLARVVVKKGSF 151
Query: 125 KQINVSENQFGEEGVEEME 143
K +N+ N +G+EE++
Sbjct: 152 KMLNIDGNMISLKGIEEIK 170
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 34/127 (26%), Positives = 68/127 (53%)
Query: 25 VGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGA 83
VG++ +S F L +NL+ + GAI L AL + PSL ++ + + A
Sbjct: 25 VGVS-MSKPFSSFSFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEAA 83
Query: 84 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 143
++IA L L+ +NL+ N++ +G +++VK+M++ +L+ +++S N EG +
Sbjct: 84 TAIAVCLAAKRHLKKLNLSENDLKDEGCVEIVKSMED-WELEYVDMSYNDLRREGALRLA 142
Query: 144 KLMKSFG 150
+++ G
Sbjct: 143 RVVVKKG 149
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 34/127 (26%), Positives = 68/127 (53%)
Query: 336 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGA 394
VG++ +S F L +NL+ + GAI L AL + PSL ++ + + A
Sbjct: 25 VGVS-MSKPFSSFSFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEAA 83
Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 454
++IA L L+ +NL+ N++ +G +++VK+M++ +L+ +++S N EG +
Sbjct: 84 TAIAVCLAAKRHLKKLNLSENDLKDEGCVEIVKSMED-WELEYVDMSYNDLRREGALRLA 142
Query: 455 KLMKSFG 461
+++ G
Sbjct: 143 RVVVKKG 149
Score = 111 (44.1 bits), Expect = 0.00056, P = 0.00056
Identities = 38/151 (25%), Positives = 71/151 (47%)
Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDA 344
SK S L V LEN GA L K +L+ +EM N I + TA++
Sbjct: 30 SKPFSSFSFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEAATAIAVC 89
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
++L+ LNL++N + +G + + +++ L +++ L+ GA +A+ +
Sbjct: 90 LAAKRHLKKLNLSENDLKDEGCVEIVKSMEDW-ELEYVDMSYNDLRREGALRLARVVVKK 148
Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
+ + +N+ N IS++G ++ N KL
Sbjct: 149 GSFKMLNIDGNMISLKGIEEIKVIFTNCPKL 179
>MGI|MGI:2429397 [details] [associations]
symbol:Nod2 "nucleotide-binding oligomerization domain
containing 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0002227 "innate immune response in
mucosa" evidence=IMP] [GO:0002253 "activation of immune response"
evidence=IMP] [GO:0002282 "microglial cell activation involved in
immune response" evidence=ISO] [GO:0002367 "cytokine production
involved in immune response" evidence=ISO] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IMP] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IMP]
[GO:0002710 "negative regulation of T cell mediated immunity"
evidence=IMP] [GO:0002732 "positive regulation of dendritic cell
cytokine production" evidence=ISO] [GO:0002830 "positive regulation
of type 2 immune response" evidence=ISO] [GO:0002862 "negative
regulation of inflammatory response to antigenic stimulus"
evidence=IMP] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006952 "defense response" evidence=TAS] [GO:0006954
"inflammatory response" evidence=TAS] [GO:0006965 "positive
regulation of biosynthetic process of antibacterial peptides active
against Gram-positive bacteria" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISO] [GO:0009595 "detection of biotic
stimulus" evidence=TAS] [GO:0009986 "cell surface" evidence=ISO]
[GO:0016045 "detection of bacterium" evidence=ISO] [GO:0016888
"endodeoxyribonuclease activity, producing 5'-phosphomonoesters"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0032494 "response to peptidoglycan"
evidence=IMP;IDA] [GO:0032495 "response to muramyl dipeptide"
evidence=ISO;IDA;IMP] [GO:0032496 "response to lipopolysaccharide"
evidence=IMP] [GO:0032498 "detection of muramyl dipeptide"
evidence=ISO] [GO:0032500 "muramyl dipeptide binding" evidence=ISO]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IMP] [GO:0032695 "negative regulation of interleukin-12
production" evidence=IMP;IDA] [GO:0032701 "negative regulation of
interleukin-18 production" evidence=IMP] [GO:0032703 "negative
regulation of interleukin-2 production" evidence=IMP] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IMP] [GO:0032731 "positive regulation of interleukin-1
beta production" evidence=ISO] [GO:0032733 "positive regulation of
interleukin-10 production" evidence=IMP] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IDA;IMP]
[GO:0032740 "positive regulation of interleukin-17 production"
evidence=ISO] [GO:0032755 "positive regulation of interleukin-6
production" evidence=ISO;IGI;IDA;IMP] [GO:0032760 "positive
regulation of tumor necrosis factor production"
evidence=IGI;ISO;IDA;IMP] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=ISO;IDA] [GO:0034136
"negative regulation of toll-like receptor 2 signaling pathway"
evidence=IMP] [GO:0035419 "activation of MAPK activity involved in
innate immune response" evidence=IDA] [GO:0035556 "intracellular
signal transduction" evidence=ISO] [GO:0042742 "defense response to
bacterium" evidence=ISO] [GO:0042834 "peptidoglycan binding"
evidence=ISO;TAS] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IDA] [GO:0043330 "response
to exogenous dsRNA" evidence=IMP] [GO:0043410 "positive regulation
of MAPK cascade" evidence=IMP] [GO:0043552 "positive regulation of
phosphatidylinositol 3-kinase activity" evidence=IMP] [GO:0044130
"negative regulation of growth of symbiont in host" evidence=IMP]
[GO:0045089 "positive regulation of innate immune response"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IDA] [GO:0046330 "positive regulation of JNK
cascade" evidence=ISO;IDA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IMP] [GO:0050700 "CARD
domain binding" evidence=ISO] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=ISO;IDA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IMP] [GO:0050766 "positive regulation of phagocytosis"
evidence=IMP] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IGI;IMP] [GO:0050871 "positive regulation of B
cell activation" evidence=ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=ISO;IMP]
[GO:0051259 "protein oligomerization" evidence=TAS] [GO:0051353
"positive regulation of oxidoreductase activity" evidence=IDA]
[GO:0051770 "positive regulation of nitric-oxide synthase
biosynthetic process" evidence=IMP] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=ISO] [GO:0060585
"positive regulation of prostaglandin-endoperoxide synthase
activity" evidence=IDA] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IDA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=ISO] [GO:0071224 "cellular response to peptidoglycan"
evidence=IMP] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IMP] [GO:0090022 "regulation of neutrophil
chemotaxis" evidence=IMP] [GO:2000110 "negative regulation of
macrophage apoptotic process" evidence=IDA] [GO:2000363 "positive
regulation of prostaglandin-E synthase activity" evidence=IDA]
InterPro:IPR001315 InterPro:IPR018228 Pfam:PF00619 PROSITE:PS50209
MGI:MGI:2429397 GO:GO:0051259 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0019901 GO:GO:0009986 GO:GO:0016045
GO:GO:0002381 GO:GO:0032689 GO:GO:0002862 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0032496 GO:GO:0006954
GO:GO:0070374 GO:GO:0046330 GO:GO:0032755 GO:GO:0045747
GO:GO:0050731 GO:GO:0050766 GO:GO:0032720 GO:GO:0044130
Reactome:REACT_107772 GO:GO:0035419 GO:GO:0051092 GO:GO:0031398
GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 GO:GO:0016888 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 GO:GO:0050700 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0043330 GO:GO:0002606 GO:GO:0032735
GO:GO:0043552 GO:GO:0051770 GO:GO:2000110 GO:GO:0032733
GO:GO:0002830 GO:GO:0032703 GO:GO:0060585 GO:GO:0090022
GO:GO:0002925 GO:GO:0070431 GO:GO:0032740 GO:GO:0050871
GO:GO:0034136 GeneTree:ENSGT00660000095240 eggNOG:NOG248107
HOGENOM:HOG000113814 GO:GO:0032500 GO:GO:0071224 GO:GO:0002367
GO:GO:0032498 GO:GO:0071608 GO:GO:0032701 GO:GO:0002710
GO:GO:2000363 HOVERGEN:HBG050792 OMA:QYECDEI EMBL:AF520774
EMBL:BC044774 IPI:IPI00223373 IPI:IPI00230403 UniGene:Mm.222633
ProteinModelPortal:Q8K3Z0 SMR:Q8K3Z0 DIP:DIP-46115N STRING:Q8K3Z0
PhosphoSite:Q8K3Z0 PRIDE:Q8K3Z0 Ensembl:ENSMUST00000054324
Ensembl:ENSMUST00000109634 Bgee:Q8K3Z0 Genevestigator:Q8K3Z0
Uniprot:Q8K3Z0
Length = 1020
Score = 146 (56.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 46/161 (28%), Positives = 83/161 (51%)
Query: 293 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 352
L+L+V G N + GA++LA K +L+ + N + G AL++ +++NL+
Sbjct: 854 LSLRV---GNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLK 910
Query: 353 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 412
L+L N I GA L L K SL L L + + G S+A+ L N+TL+ + L
Sbjct: 911 WLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKL 970
Query: 413 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
+ N I+ +G L++A+ + + ++ + N F E ++ +
Sbjct: 971 SNNGITYRGAEALLQALSRNSAILEVWLRGNTFSLEEIQTL 1011
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 59/228 (25%), Positives = 95/228 (41%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYES 285
R V L L N+ G +GVE L L C A G + L + C +
Sbjct: 771 RPVALQLDYNSVGDVGVEQLRPCL--GVCTALYLRDNNISDR---GARTLVECALRCEQL 825
Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 345
K LAL F N+L + A +A + + + + N I G L+
Sbjct: 826 QK-----LAL--F---NNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGL 875
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 405
+ N +L+ L N++ KG L + ++ +L L+L + S GA ++A L N
Sbjct: 876 KSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNK 935
Query: 406 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 453
+LE++ L N I +G L + +K + LK + +S N G E +
Sbjct: 936 SLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEAL 983
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 35/156 (22%), Positives = 70/156 (44%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N + + GA+ L + + L+++ + N + +++ +N L + +N IT
Sbjct: 805 NNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHIT 864
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
GA L Q L SL L + G ++A+ + D+ L+ ++L N I G
Sbjct: 865 AAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGA 924
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L ++ L+++ + EN +EGV + + +K
Sbjct: 925 EALALMLEKNKSLEELCLEENHICDEGVYSLAEGLK 960
Score = 51 (23.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 22/106 (20%), Positives = 43/106 (40%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
L L+ N++ G + + Q L L L D + GA ++ + L+ + L
Sbjct: 775 LQLDYNSV---GDVGVEQLRPCLGVCTALYLRDNNISDRGARTLVECALRCEQLQKLALF 831
Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 148
N+++ + K + +K + V N G E + + +KS
Sbjct: 832 NNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKS 877
>DICTYBASE|DDB_G0292386 [details] [associations]
symbol:carmil "leucine-rich repeat-containing protein
(LRR)" species:44689 "Dictyostelium discoideum" [GO:0015629 "actin
cytoskeleton" evidence=TAS] [GO:0008290 "F-actin capping protein
complex" evidence=TAS] [GO:0005885 "Arp2/3 protein complex"
evidence=TAS] [GO:0045010 "actin nucleation" evidence=TAS]
[GO:0017024 "myosin I binding" evidence=TAS] [GO:0042995 "cell
projection" evidence=IEA] [GO:0031143 "pseudopodium" evidence=IEA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0292386
GO:GO:0045335 GenomeReviews:CM000155_GR GO:GO:0031143 GO:GO:0045010
EMBL:AAFI02000190 EMBL:AF388524 RefSeq:XP_629656.1
ProteinModelPortal:Q95VZ3 STRING:Q95VZ3 EnsemblProtists:DDB0185176
GeneID:8628720 KEGG:ddi:DDB_G0292386 eggNOG:NOG239526
InParanoid:Q95VZ3 OMA:EYFSMAV GO:GO:0017024 Uniprot:Q95VZ3
Length = 1050
Score = 110 (43.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLR--HLNLNDNTITYKGAIPLG 59
LA V K T+E + + G+ H + ++ A NK L +++++N I KG
Sbjct: 231 LAEVLKCNSTVEDLSLNNVGLKHDTMPIIATALSSNKNLALTAIDISNNQIEDKGMTAFS 290
Query: 60 QAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDN----TTLEDVNLTCNEISVQGGLDL 114
+ S L +A L++ + AG S + L N +TL +NL+ N++ G L
Sbjct: 291 SYVASSLRGIASLDVSNTNCNKAGISVLTNALKKNIKMSSTLSYLNLSGNKMEADGSAGL 350
Query: 115 VKAMKNKTKLKQINVS 130
+ + LK +N+S
Sbjct: 351 SSFLASPNTLKTLNIS 366
Score = 89 (36.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 38/142 (26%), Positives = 71/142 (50%)
Query: 303 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN-- 359
N L GA+MLA++ KL + +++ +N G++ + D F N ++ L LN N
Sbjct: 452 NDLGIAGARMLASLATDKLSNVIYLDVSENDFGDEGVSVICDGFVGNSTIKKLILNGNFK 511
Query: 360 -TITYKGAIPLGQALSKLPS---LAILNLGDCLLKS---AGASSIAKYLTDNTTLEDVNL 412
+ T + +S L S L L++ KS A S+ L N++L ++++
Sbjct: 512 QSKTKSRPSAIESVISLLESECPLETLHMTVGNSKSPLKADILSLIYSLATNSSLLELDI 571
Query: 413 TCNEISVQGGLDLVKAMK-NKT 433
+ +++ +G + L KA++ NKT
Sbjct: 572 SGHQMGPKGAIGLGKALQTNKT 593
Score = 88 (36.0 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 35/150 (23%), Positives = 76/150 (50%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKK-LRHLNLNDNTITYKGAIPLGQALSK---LPS 67
L +++ N I G+TA S + + + L++++ G L AL K + S
Sbjct: 271 LTAIDISNNQIEDKGMTAFSSYVASSLRGIASLDVSNTNCNKAGISVLTNALKKNIKMSS 330
Query: 68 -LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLK 125
L+ LNL +++ G++ ++ +L TL+ +N++ S++ +V A+ +LK
Sbjct: 331 TLSYLNLSGNKMEADGSAGLSSFLASPNTLKTLNISNTTPSME---TIVGALVIGCAELK 387
Query: 126 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 155
I++S+N+ ++ E+ L++ G ++ L
Sbjct: 388 TIDISDNKLTKK---EVPHLVRFIGASSTL 414
Score = 86 (35.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 7 KKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTI---TYKGAIPLGQALS 63
K TL ++ + N + G LS L+ LN+++ T T GA+ +G A
Sbjct: 327 KMSSTLSYLNLSGNKMEADGSAGLSSFLASPNTLKTLNISNTTPSMETIVGALVIGCA-- 384
Query: 64 KLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK 123
L +++ D L + +++ ++TL+ NL+ ++ V+ +LV A+ +
Sbjct: 385 ---ELKTIDISDNKLTKKEVPHLVRFIGASSTLKHFNLSGTKVPVENLKELVVAITSNIY 441
Query: 124 LKQI--NVSENQFGEEGVEEMEKL 145
L+ + ++ N G G + L
Sbjct: 442 LQDVVLDLKNNDLGIAGARMLASL 465
Score = 83 (34.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 29/142 (20%), Positives = 68/142 (47%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK----LRHLNLNDNTITYKGAIPLGQ 60
V L+ + +++ GI+ L++A ++N K L +LNL+ N + G+ L
Sbjct: 293 VASSLRGIASLDVSNTNCNKAGISVLTNALKKNIKMSSTLSYLNLSGNKMEADGSAGLSS 352
Query: 61 ALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
L+ +L LN+ + + + + + L+ ++++ N+++ + LV+ +
Sbjct: 353 FLASPNTLKTLNISNTT--PSMETIVGALVIGCAELKTIDISDNKLTKKEVPHLVRFIGA 410
Query: 121 KTKLKQINVSENQFGEEGVEEM 142
+ LK N+S + E ++E+
Sbjct: 411 SSTLKHFNLSGTKVPVENLKEL 432
Score = 74 (31.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
I +L + N +L L+++ + + KGAI LG+AL +L L D L + G +
Sbjct: 553 ILSLIYSLATNSSLLELDISGHQMGPKGAIGLGKALQTNKTLHTLIWDDNLTTAIGFAGF 612
Query: 398 AKYLTDNTTLEDVNLTCNEI 417
L N TL+++ N+I
Sbjct: 613 QVGLERNLTLKNMPTPLNDI 632
Score = 61 (26.5 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
L T + L+ELD+S + GP G GL L+++
Sbjct: 560 LATNSSLLELDISGHQMGPKGAIGLGKALQTN 591
Score = 38 (18.4 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 396 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA-------MKNKTKLKQ--------INV 440
SI + +TD + V + V GG+ L+K M+ KLK IN
Sbjct: 695 SIGRKVTDPNNILIVKDAESTEKVIGGIHLIKESIHASLEMELNQKLKDFVQVVNDVINA 754
Query: 441 SENQFGEEGVEEMEKLMKS 459
+N+ ++ +E M+ +S
Sbjct: 755 KKNEMTQQILESMQNTFQS 773
>UNIPROTKB|B0QYT4 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 GO:GO:0048471
GO:GO:0007165 EMBL:AL035681 GO:GO:0032853 GO:GO:0005098
PANTHER:PTHR24113 UniGene:Hs.183800 HGNC:HGNC:9854 ChiTaRS:RANGAP1
Gene3D:1.25.40.200 EMBL:AL035659 IPI:IPI00879993 SMR:B0QYT4
STRING:B0QYT4 Ensembl:ENST00000452543 HOGENOM:HOG000199972
HOVERGEN:HBG096813 Uniprot:B0QYT4
Length = 133
Score = 93 (37.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 18/24 (75%), Positives = 21/24 (87%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEG 244
+ GA+LVELDLSDNAFGP GV+G
Sbjct: 108 ITAGAQLVELDLSDNAFGPDGVQG 131
Score = 64 (27.6 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 83 ASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
A + K + D +LE + L N + V+ + KA++ K++LK+ + S+
Sbjct: 38 AKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKRCHWSD 86
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 35 EENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
E+ L L L NT+ + A + +AL K L
Sbjct: 46 EDFDSLEALRLEGNTVGVEAARVIAKALEKKSEL 79
>UNIPROTKB|F1PS92 [details] [associations]
symbol:NLRP9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
InterPro:IPR003590 SMART:SM00368 EMBL:AAEX03000721
Ensembl:ENSCAFT00000003954 Uniprot:F1PS92
Length = 995
Score = 105 (42.0 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 58/227 (25%), Positives = 99/227 (43%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYES 285
+L L L++N G+ L D L+ C + C +S+AL C +S
Sbjct: 747 KLKLLSLAENPLRNEGMLMLCDALKHPDCVLETLLLMCCCLTSVA-CDYISQALL-CNKS 804
Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDA 344
S L L+ N L+++G L K +E++ + + + LSD
Sbjct: 805 L----SFLDLE-----SNFLKDDGVASLCEALKHPNCHIEQLWLADCSLTSLCCKNLSDV 855
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG-D-CLLKSAGASSIAKYLT 402
N+ L+ L L N I G L +AL K P + +LG D C L +A ++A LT
Sbjct: 856 LVCNEKLKILKLGSNDIQDAGVKQLCEAL-KHPDCKVEHLGLDMCQLTTACCEALASALT 914
Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEE 448
+L+ +NL + G + L +A+ + L+Q+ + ++ F +E
Sbjct: 915 VCKSLKSLNLHWISLDRDGAVVLCEALNHLDCALQQLGLDKSVFDKE 961
Score = 92 (37.4 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 29 ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSI 86
AL A N L+HLNL+ +++++ L + L K P+ +I L LG C + + I
Sbjct: 680 ALHKAILHNPHLKHLNLHGSSLSHVDVRQLCEML-KHPTCSIEELMLGMCDITAEACEEI 738
Query: 87 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
A L N L+ ++L N + +G L L A+K+
Sbjct: 739 ASVLVCNKKLKLLSLAENPLRNEGMLMLCDALKH 772
Score = 90 (36.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 48/174 (27%), Positives = 69/174 (39%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
LDL N GV L + L+ C + CK LS L C E
Sbjct: 808 LDLESNFLKDDGVASLCEALKHPNCHIEQLWLADCSLTSLC-CKNLSDVLV-CNEK---- 861
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEEN 348
LK+ G N +++ G K L K +E + + + AL+ A
Sbjct: 862 -----LKILKLGSNDIQDAGVKQLCEALKHPDCKVEHLGLDMCQLTTACCEALASALTVC 916
Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 402
K+L+ LNL+ ++ GA+ L +AL+ L A+ LG L KS I LT
Sbjct: 917 KSLKSLNLHWISLDRDGAVVLCEALNHL-DCALQQLG--LDKSVFDKEIQMLLT 967
Score = 85 (35.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 37 NKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDNT 94
NKKL+ L+L +N + +G + L AL K P L L L C L S I++ L N
Sbjct: 745 NKKLKLLSLAENPLRNEGMLMLCDAL-KHPDCVLETLLLMCCCLTSVACDYISQALLCNK 803
Query: 95 TLEDVNLTCNEISVQGGLDLVKAMKN 120
+L ++L N + G L +A+K+
Sbjct: 804 SLSFLDLESNFLKDDGVASLCEALKH 829
Score = 66 (28.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 54 GAIP-LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLTCNEISVQGG 111
G+ P L +A+ P L LNL L + + L T ++E++ L +I+ +
Sbjct: 676 GSSPALHKAILHNPHLKHLNLHGSSLSHVDVRQLCEMLKHPTCSIEELMLGMCDITAEAC 735
Query: 112 LDLVKAMKNKTKLKQINVSENQFGEEGV 139
++ + KLK ++++EN EG+
Sbjct: 736 EEIASVLVCNKKLKLLSLAENPLRNEGM 763
>UNIPROTKB|Q9HC29 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0002227 "innate immune
response in mucosa" evidence=IEA] [GO:0002282 "microglial cell
activation involved in immune response" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002710 "negative regulation of
T cell mediated immunity" evidence=IEA] [GO:0002732 "positive
regulation of dendritic cell cytokine production" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002925 "positive regulation
of humoral immune response mediated by circulating immunoglobulin"
evidence=IEA] [GO:0006965 "positive regulation of biosynthetic
process of antibacterial peptides active against Gram-positive
bacteria" evidence=IEA] [GO:0007584 "response to nutrient"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032496 "response
to lipopolysaccharide" evidence=IEA] [GO:0032689 "negative
regulation of interferon-gamma production" evidence=IEA]
[GO:0032695 "negative regulation of interleukin-12 production"
evidence=IEA] [GO:0032701 "negative regulation of interleukin-18
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032735 "positive regulation of interleukin-12 production"
evidence=IEA] [GO:0034136 "negative regulation of toll-like
receptor 2 signaling pathway" evidence=IEA] [GO:0043330 "response
to exogenous dsRNA" evidence=IEA] [GO:0044130 "negative regulation
of growth of symbiont in host" evidence=IEA] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0050766 "positive regulation of phagocytosis" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0052033 "pathogen-associated molecular pattern
dependent induction by symbiont of host innate immune response"
evidence=IEA] [GO:0071224 "cellular response to peptidoglycan"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0090022 "regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IDA;TAS]
[GO:0050700 "CARD domain binding" evidence=IPI] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0009986 "cell surface"
evidence=IDA] [GO:0032740 "positive regulation of interleukin-17
production" evidence=IMP] [GO:0045087 "innate immune response"
evidence=NAS;TAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0002367 "cytokine production involved in immune response"
evidence=IMP] [GO:0032498 "detection of muramyl dipeptide"
evidence=IDA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IMP;IDA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IDA]
[GO:0070431 "nucleotide-binding oligomerization domain containing 2
signaling pathway" evidence=IDA] [GO:0006952 "defense response"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0009595
"detection of biotic stimulus" evidence=TAS] [GO:0042834
"peptidoglycan binding" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=TAS] [GO:0032495 "response to muramyl
dipeptide" evidence=IDA] [GO:0032500 "muramyl dipeptide binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016045 "detection of bacterium" evidence=IDA] [GO:0031982
"vesicle" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0042742 "defense response to bacterium" evidence=IDA]
[GO:0035556 "intracellular signal transduction" evidence=IDA]
[GO:0050718 "positive regulation of interleukin-1 beta secretion"
evidence=IDA] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=TAS] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0002756 "MyD88-independent
toll-like receptor signaling pathway" evidence=TAS] [GO:0007254
"JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0051403 "stress-activated MAPK cascade"
evidence=TAS] [GO:0070423 "nucleotide-binding oligomerization
domain containing signaling pathway" evidence=TAS] [GO:0032733
"positive regulation of interleukin-10 production" evidence=ISS]
[GO:0035419 "activation of MAPK activity involved in innate immune
response" evidence=ISS] [GO:0043552 "positive regulation of
phosphatidylinositol 3-kinase activity" evidence=ISS] [GO:0045747
"positive regulation of Notch signaling pathway" evidence=ISS]
[GO:0051353 "positive regulation of oxidoreductase activity"
evidence=ISS] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=ISS] [GO:0060585 "positive
regulation of prostaglandin-endoperoxide synthase activity"
evidence=ISS] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=ISS] [GO:2000110 "negative regulation of
macrophage apoptotic process" evidence=ISS] [GO:0002606 "positive
regulation of dendritic cell antigen processing and presentation"
evidence=ISS] [GO:0046645 "positive regulation of gamma-delta T
cell activation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0002830 "positive
regulation of type 2 immune response" evidence=IMP] [GO:2000363
"positive regulation of prostaglandin-E synthase activity"
evidence=ISS] [GO:0050871 "positive regulation of B cell
activation" evidence=IDA] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=IMP] [GO:0050727
"regulation of inflammatory response" evidence=IC] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IDA]
Reactome:REACT_6782 InterPro:IPR001611 InterPro:IPR001315
Pfam:PF00619 PROSITE:PS50209 PROSITE:PS51450 SMART:SM00114
GO:GO:0051259 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
Reactome:REACT_6900 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0007254
GO:GO:0043123 GO:GO:0042742 Orphanet:206 GO:GO:0032496
GO:GO:0070374 GO:GO:0046330 GO:GO:0045087 GO:GO:0032755
GO:GO:0045747 GO:GO:0050731 GO:GO:0050766 GO:GO:0050727
GO:GO:0032720 GO:GO:0044130 GO:GO:0035419 GO:GO:0051092
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0006965
GO:GO:0002227 GO:GO:0042834 GO:GO:0032695 GO:GO:0032760
GO:GO:0002755 GO:GO:0008063 GO:GO:0034130 GO:GO:0034134
GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0050679
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0043330 GO:GO:0002606
GO:GO:0032735 GO:GO:0043552 GO:GO:0051770 GO:GO:2000110
GO:GO:0032733 GO:GO:0002830 GO:GO:0032703 GO:GO:0060585
GO:GO:0090022 GO:GO:0002925 GO:GO:0070431 GO:GO:0032740
Orphanet:771 GO:GO:0050871 GO:GO:0034136 CTD:64127 eggNOG:NOG248107
HOGENOM:HOG000113814 KO:K10165 OrthoDB:EOG4WM4T6 GO:GO:0032500
GO:GO:0071224 GO:GO:0002367 GO:GO:0032498 GO:GO:0071608
GO:GO:0032701 GO:GO:0002710 GO:GO:0046645 GO:GO:2000363
EMBL:AF178930 EMBL:AF385089 EMBL:AF385090 EMBL:AJ303140
IPI:IPI00005559 IPI:IPI00759531 RefSeq:NP_071445.1
UniGene:Hs.592072 ProteinModelPortal:Q9HC29 SMR:Q9HC29
DIP:DIP-41998N MINT:MINT-151071 STRING:Q9HC29 PhosphoSite:Q9HC29
DMDM:20137973 PaxDb:Q9HC29 PRIDE:Q9HC29 DNASU:64127
Ensembl:ENST00000300589 GeneID:64127 KEGG:hsa:64127 UCSC:uc002egl.1
GeneCards:GC16P050729 HGNC:HGNC:5331 MIM:186580 MIM:266600
MIM:605956 MIM:609464 neXtProt:NX_Q9HC29 Orphanet:90340
Orphanet:90341 PharmGKB:PA26074 HOVERGEN:HBG050792
InParanoid:Q9HC29 OMA:QYECDEI PhylomeDB:Q9HC29 BindingDB:Q9HC29
ChEMBL:CHEMBL1293266 GenomeRNAi:64127 NextBio:66012
ArrayExpress:Q9HC29 Bgee:Q9HC29 CleanEx:HS_NOD2
Genevestigator:Q9HC29 GermOnline:ENSG00000167207 Uniprot:Q9HC29
Length = 1040
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/244 (26%), Positives = 111/244 (45%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLR-SSCCFAXXXXXXXXXXXXITGCKLLSKALHDC-- 282
R V L L N+ G IGVE L L + + C L + L
Sbjct: 791 RPVALQLDYNSVGDIGVEQLLPCLGVCKALYLRDNNISDRGICKLIECALHCEQLQKLAL 850
Query: 283 YESSKKEGSP------LALKV-FIA---GRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
+ + +G LA + F+A G N + GA++LA + +L+ + N
Sbjct: 851 FNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNR 910
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
+ G AL++A ++++LR L+L N I GA L L+K L L L + L+
Sbjct: 911 VGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDE 970
Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
G S+A+ L N++L+ + L+ N I+ G L++A++ + ++ + N F +EE
Sbjct: 971 GVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFS---LEE 1027
Query: 453 MEKL 456
++KL
Sbjct: 1028 VDKL 1031
Score = 120 (47.3 bits), Expect = 0.00087, P = 0.00087
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+ + N I G L++ N L+ L N + +GA L +AL SL L+L
Sbjct: 876 LRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLV 935
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ S GA ++A L N LE++ L N + +G L + +K + LK + +S N
Sbjct: 936 GNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEGLKKNSSLKILKLSNNCI 995
Query: 135 GEEGVEEM 142
G E +
Sbjct: 996 TYLGAEAL 1003
Score = 108 (43.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 20 NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
N I GI L + ++L+ L L +N +T A + + L+ + L LG+ +
Sbjct: 825 NNISDRGICKLIECALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYIT 884
Query: 80 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
+AGA +A+ L NT+L+ + N + +G L +A+ + L+ +++ N G G
Sbjct: 885 AAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGA 944
Query: 140 EEMEKLMKSFGMAAALVL 157
+ + ++ M L L
Sbjct: 945 QALALMLAKNVMLEELCL 962
Score = 92 (37.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA V + L+ +++ N + +G+ L K L L DN I+ +G L +
Sbjct: 782 LAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCLGVCKALY---LRDNNISDRGICKLIEC 838
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L L L + L A S+AK L + L N I+ G L + ++
Sbjct: 839 ALHCEQLQKLALFNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQVLAEGLRGN 898
Query: 122 TKLKQINVSENQFGEEGVEEMEKLM 146
T L+ + N+ G+EG + + + +
Sbjct: 899 TSLQFLGFWGNRVGDEGAQALAEAL 923
Score = 85 (35.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N L++EG LA KK +L+ +++ N I ++G AL A E N + + L NT +
Sbjct: 965 NHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFS 1024
Query: 363 YKGAIPLG 370
+ LG
Sbjct: 1025 LEEVDKLG 1032
>UNIPROTKB|F1PSA2 [details] [associations]
symbol:NLRP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
OMA:QEVWLLI EMBL:AAEX03000720 Ensembl:ENSCAFT00000003937
Uniprot:F1PSA2
Length = 1170
Score = 104 (41.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 62/248 (25%), Positives = 98/248 (39%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L L LS N+ G G+ L ++ C + GC L+ AL
Sbjct: 923 LTHLCLSSNSLGSEGMNLLGRAIKFPNC-GLQRLILNECNLDVAGCGFLAFAL-----MG 976
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAF 345
+ + L+L + N LE++G +L V + L+ +E+ + + LS
Sbjct: 977 NRHLTHLSLSM-----NPLEDDGMNLLCEVIMEPSCHLQDLELVKCHLTAGCCKKLSHVI 1031
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAILNLGDCLLKSAGASSIAKYLTDN 404
NK+L+ L+L N + G L + L + SL L L C L S +A L +
Sbjct: 1032 VRNKHLKSLDLAVNALGDDGVTALCEGLKHRKASLKRLGLEACGLTSGCCEVLASALLCS 1091
Query: 405 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAA 464
L +NL N+ S G L A T QI + E ++ KL+K +
Sbjct: 1092 QRLTSLNLMRNDFSPMGMTKLCPAFAQPTSNLQII---GLWKWEYPTQIRKLLKEVQLVK 1148
Query: 465 A-LVLEDD 471
+V+ DD
Sbjct: 1149 PQIVIGDD 1156
Score = 90 (36.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAI 70
LE + + G+ +S + L+ L+L N +T +G PL AL+ +L
Sbjct: 838 LESLRLDHCGLTPACCLVISQILVTSISLKSLSLVGNKVTNQGIKPLCDALTASQCTLQK 897
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
+ LG C LK+ +A L N +L + L+ N + +G L +A+K
Sbjct: 898 MILGKCGLKAPDCQDLASALISNQSLTHLCLSSNSLGSEGMNLLGRAIK 946
>RGD|1306368 [details] [associations]
symbol:Nod2 "nucleotide-binding oligomerization domain
containing 2" species:10116 "Rattus norvegicus" [GO:0002227 "innate
immune response in mucosa" evidence=IEA;ISO] [GO:0002253
"activation of immune response" evidence=ISO] [GO:0002282
"microglial cell activation involved in immune response"
evidence=IDA] [GO:0002367 "cytokine production involved in immune
response" evidence=IEA;ISO] [GO:0002381 "immunoglobulin production
involved in immunoglobulin mediated immune response"
evidence=IEA;ISO] [GO:0002606 "positive regulation of dendritic
cell antigen processing and presentation" evidence=ISO] [GO:0002710
"negative regulation of T cell mediated immunity" evidence=IEA;ISO]
[GO:0002732 "positive regulation of dendritic cell cytokine
production" evidence=IDA] [GO:0002830 "positive regulation of type
2 immune response" evidence=IEA;ISO] [GO:0002862 "negative
regulation of inflammatory response to antigenic stimulus"
evidence=IEA;ISO] [GO:0002925 "positive regulation of humoral
immune response mediated by circulating immunoglobulin"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006965 "positive regulation of biosynthetic
process of antibacterial peptides active against Gram-positive
bacteria" evidence=IEA;ISO] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0016045 "detection of bacterium" evidence=IEA;ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISO] [GO:0031982 "vesicle"
evidence=IEA;ISO] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0032494
"response to peptidoglycan" evidence=ISO] [GO:0032495 "response to
muramyl dipeptide" evidence=ISO;IDA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA;ISO] [GO:0032498 "detection of
muramyl dipeptide" evidence=IEA;ISO] [GO:0032500 "muramyl dipeptide
binding" evidence=ISO;IDA] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=IEA;ISO] [GO:0032695
"negative regulation of interleukin-12 production"
evidence=IEA;ISO] [GO:0032701 "negative regulation of
interleukin-18 production" evidence=IEA;ISO] [GO:0032703 "negative
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA;ISO] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=ISO] [GO:0032733 "positive
regulation of interleukin-10 production" evidence=ISO] [GO:0032735
"positive regulation of interleukin-12 production"
evidence=IEA;ISO] [GO:0032740 "positive regulation of
interleukin-17 production" evidence=IEA;ISO] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA;ISO]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA;ISO] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=ISO] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway"
evidence=IEA;ISO] [GO:0035419 "activation of MAPK activity involved
in innate immune response" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISO] [GO:0042742 "defense response to
bacterium" evidence=ISO;IDA] [GO:0042834 "peptidoglycan binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043330 "response
to exogenous dsRNA" evidence=IEA;ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0043552 "positive
regulation of phosphatidylinositol 3-kinase activity" evidence=ISO]
[GO:0044130 "negative regulation of growth of symbiont in host"
evidence=IEA;ISO] [GO:0045089 "positive regulation of innate immune
response" evidence=ISO] [GO:0045747 "positive regulation of Notch
signaling pathway" evidence=ISO] [GO:0046330 "positive regulation
of JNK cascade" evidence=IEA;ISO] [GO:0050679 "positive regulation
of epithelial cell proliferation" evidence=ISO] [GO:0050700 "CARD
domain binding" evidence=IEA;ISO] [GO:0050718 "positive regulation
of interleukin-1 beta secretion" evidence=IEA;ISO] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA;ISO] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA;ISO] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA;ISO] [GO:0050871 "positive regulation of B
cell activation" evidence=IEA;ISO] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA;ISO]
[GO:0051353 "positive regulation of oxidoreductase activity"
evidence=ISO] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=ISO] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=IDA] [GO:0060585
"positive regulation of prostaglandin-endoperoxide synthase
activity" evidence=ISO] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IEA;ISO] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA;ISO] [GO:0071224 "cellular response to peptidoglycan"
evidence=IEA;ISO] [GO:0071608 "macrophage inflammatory protein-1
alpha production" evidence=IEA;ISO] [GO:0090022 "regulation of
neutrophil chemotaxis" evidence=IEA;ISO] [GO:2000110 "negative
regulation of macrophage apoptotic process" evidence=ISO]
[GO:2000363 "positive regulation of prostaglandin-E synthase
activity" evidence=ISO] InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 RGD:1306368 GO:GO:0005737 GO:GO:0042981
GO:GO:0008284 GO:GO:0042742 GO:GO:0007584 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0052033 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0032495 GO:GO:0002282 GO:GO:0032500
IPI:IPI00359351 ProteinModelPortal:F1LZ02
Ensembl:ENSRNOT00000018996 GO:GO:0002732 Uniprot:F1LZ02
Length = 1019
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 58/241 (24%), Positives = 104/241 (43%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLR-SSCCFAXXXXXXXXXXXXITGCKLLSKALHDC-- 282
R V L L N+ G +GVE L L + + + C L + L
Sbjct: 770 RPVALQLDHNSVGDVGVEQLLPCLGVCTALYLRDNNISDRGARTLVECALRCEQLQKLAL 829
Query: 283 YESSKKEGSPLALKVFIA----------GRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
+ + +G ++ +A G N + GA++LA K +L+ + N
Sbjct: 830 FNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLQFLGFWGNS 889
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
+ G AL++ +++ L+ L+L N I GA L L K SL L L + +
Sbjct: 890 VGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGAHALALMLEKNKSLEELCLEENHICDE 949
Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
G S+A+ L N+TL+ + L+ N I+ +G L++A+ + + ++ + N F E +
Sbjct: 950 GVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALNRNSTVLEVWLRGNTFSPEEAQT 1009
Query: 453 M 453
+
Sbjct: 1010 L 1010
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 35/156 (22%), Positives = 72/156 (46%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N + + GA+ L + + L+++ + N + ++++ +N L + +N IT
Sbjct: 804 NNISDRGARTLVECALRCEQLQKLALFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHIT 863
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
GA L Q L SL L + G+ ++A+ + D+ L+ ++L N I G
Sbjct: 864 AAGAEVLAQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGA 923
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L ++ L+++ + EN +EGV + + +K
Sbjct: 924 HALALMLEKNKSLEELCLEENHICDEGVYSLAEGLK 959
Score = 102 (41.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 36/145 (24%), Positives = 64/145 (44%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA V + L+ +++ N + VG+ L L L DN I+ +GA L +
Sbjct: 761 LAFVLQHLQRPVALQLDHNSVGDVGVEQLLPCLGV---CTALYLRDNNISDRGARTLVEC 817
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
+ L L L + L ASS+AK L + + N I+ G L + +K+
Sbjct: 818 ALRCEQLQKLALFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSN 877
Query: 122 TKLKQINVSENQFGEEGVEEMEKLM 146
T L+ + N G++G + + +++
Sbjct: 878 TSLQFLGFWGNSVGDKGSQALAEVV 902
Score = 100 (40.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
L + +N IT GA L Q L SL L + G+ ++A+ + D+ L+ ++L
Sbjct: 855 LRVGNNHITAAGAEVLAQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLV 914
Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
N I G L ++ L+++ + EN +EGV + + +K
Sbjct: 915 GNNIGSVGAHALALMLEKNKSLEELCLEENHICDEGVYSLAEGLK 959
Score = 98 (39.6 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 29/128 (22%), Positives = 61/128 (47%)
Query: 20 NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
N I G L + ++L+ L L +N +T A + + L+ + L +G+ +
Sbjct: 804 NNISDRGARTLVECALRCEQLQKLALFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHIT 863
Query: 80 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
+AGA +A+ L NT+L+ + N + +G L + + + +LK +++ N G G
Sbjct: 864 AAGAEVLAQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGA 923
Query: 140 EEMEKLMK 147
+ +++
Sbjct: 924 HALALMLE 931
Score = 79 (32.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N + +EG LA K+ TL+ +++ NGI + G AL A N + + L NT +
Sbjct: 944 NHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALNRNSTVLEVWLRGNTFS 1003
Query: 363 YKGAIPLGQALSKL 376
+ A L + ++L
Sbjct: 1004 PEEAQTLSSSDARL 1017
>UNIPROTKB|F1NAC7 [details] [associations]
symbol:F1NAC7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0034341 "response to interferon-gamma" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046677 "response to antibiotic" evidence=IEA]
InterPro:IPR001611 InterPro:IPR008095 PRINTS:PR01719
PROSITE:PS51450 GO:GO:0005524 GO:GO:0045944 GO:GO:0046677
GO:GO:0000122 GO:GO:0044212 InterPro:IPR025875 Pfam:PF12799
GO:GO:0034341 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0045345
GeneTree:ENSGT00660000095240 EMBL:AADN02023473 IPI:IPI00571200
Ensembl:ENSGALT00000011613 OMA:EQTKDYE Uniprot:F1NAC7
Length = 759
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 45/145 (31%), Positives = 73/145 (50%)
Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 372
+ A F L+ L+ + +NGI G +LS+ F +L LNL+ N IT GA L A
Sbjct: 610 ILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGAEKLATA 669
Query: 373 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
L L SL L+L + + GA ++AK L +L +++ N+I+ G L +++
Sbjct: 670 LPSLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDIQYNKITDVGAQQLTDSLRKC 729
Query: 433 TKLKQINVSENQFGEEGV-EEMEKL 456
+K + V N GV E +++L
Sbjct: 730 PHIKNL-VMWNPTIPYGVLEHLQQL 753
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 45/145 (31%), Positives = 72/145 (49%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+ A F L+ L+ + +NGI G +LS+ F L LNL+ N IT GA L A
Sbjct: 610 ILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGAEKLATA 669
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L L SL L+L + + GA ++AK L +L +++ N+I+ G L +++
Sbjct: 670 LPSLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDIQYNKITDVGAQQLTDSLRKC 729
Query: 122 TKLKQINVSENQFGEEGV-EEMEKL 145
+K + V N GV E +++L
Sbjct: 730 PHIKNL-VMWNPTIPYGVLEHLQQL 753
Score = 119 (46.9 bits), Expect = 0.00076, P = 0.00076
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N + +EGAK L+ VF L +LE + + QN I VG L+ A +L L+L +N+I
Sbjct: 628 NGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGAEKLATALPSLSSLTTLSLYNNSIC 687
Query: 363 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
GA L + L + SL +L++ + GA + L
Sbjct: 688 DFGAENLAKVLPAMASLRVLDIQYNKITDVGAQQLTDSL 726
>UNIPROTKB|F1PS72 [details] [associations]
symbol:NLRP13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
EMBL:AAEX03000720 Ensembl:ENSCAFT00000003974 OMA:LITTKEY
Uniprot:F1PS72
Length = 1093
Score = 123 (48.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 302 RNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
RN+L +EG K L +L+ +++ G L++A N N++ L++ +N
Sbjct: 913 RNKLRDEGVKFLCKALSHPDCSLQNLDLSDCSFTADGCQELANALRHNHNMKILDIRNND 972
Query: 361 ITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
+ G L + L P L L L C L A ++ LT + +L ++NL N++
Sbjct: 973 VQDNGVKHLCEVLQD-PYCELNTLGLEKCNLTPACCQHLSSVLTSSKSLINLNLLENDLE 1031
Query: 419 VQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMK 458
G L KA+K KL+++ + + + VE +E+L +
Sbjct: 1032 PSGVSILWKALKKSMCKLQKLGLKKELYDLVKVE-LEELQE 1071
Score = 121 (47.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 301 GRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
G N L+++G ++L A + LER+ + + LS+A +NK+L HLNL N
Sbjct: 855 GFNPLQDDGVRLLCAALTHPECALERLVLWFCQLGAPSCRYLSEALLKNKSLTHLNLRRN 914
Query: 360 TITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
+ +G L +ALS SL L+L DC + G +A L N ++ +++ N++
Sbjct: 915 KLRDEGVKFLCKALSHPDCSLQNLDLSDCSFTADGCQELANALRHNHNMKILDIRNNDVQ 974
Query: 419 VQGGLDLVKAMKN 431
G L + +++
Sbjct: 975 DNGVKHLCEVLQD 987
Score = 67 (28.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 24/100 (24%), Positives = 50/100 (50%)
Query: 37 NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS-IAKYL----T 91
N +L HLNL+ N + +P+ + K + NL L+S G + + ++L +
Sbjct: 734 NNRLTHLNLSSNNL----GVPVSTMIFKTLRHSACNLQYLWLESCGLTPLVCRHLFVELS 789
Query: 92 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
N+++ ++L N++S GL M + LK++++ +
Sbjct: 790 RNSSVSFLSLGDNDLSGMKGLQGPSGMSTSS-LKELSLEK 828
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS-VQGGLDLVKAMKNKTKLKQINV 129
L+L + L ++ + Y N + LTC I+ V+ +LV + +L +N+
Sbjct: 684 LDLSNSKLNTSSMKKLC-YELRNPRCKLRKLTCKSITPVKILKELVLVLHGNNRLTHLNL 742
Query: 130 SENQFG 135
S N G
Sbjct: 743 SSNNLG 748
>ZFIN|ZDB-GENE-060421-8264 [details] [associations]
symbol:zgc:136791 "zgc:136791" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-060421-8264 InterPro:IPR007111
PROSITE:PS50837 eggNOG:NOG82860 OrthoDB:EOG4HX508
GeneTree:ENSGT00690000101934 EMBL:AL929041 IPI:IPI00758745
UniGene:Dr.113712 UniGene:Dr.84346 ProteinModelPortal:A5PF24
Ensembl:ENSDART00000144759 HOVERGEN:HBG092009 OMA:PHCKLEK
ArrayExpress:A5PF24 Bgee:A5PF24 Uniprot:A5PF24
Length = 938
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 63/241 (26%), Positives = 105/241 (43%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+ L ELDLS N G GV+ L+ L+ C GC L+ L
Sbjct: 663 SNLRELDLSYNIVGDSGVKLLSAGLKDPHCKLEKLRLRCCGVSD-EGCADLASVLRS--N 719
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSD 343
SS L+ + + + G K+L+A K LE++ + G+ G AL+
Sbjct: 720 SSNLRELELSKNINVG------DSGVKLLSAGLKDPHCKLEKLRLGYCGVSDEGCAALAS 773
Query: 344 AFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKY 400
N NLR L+L+DN I G L L K P L L L +C + G +++A
Sbjct: 774 VLRSNSSNLRELDLSDNKIVDSGVKRLSAGL-KDPQCKLETLRLINCDVSGKGCAALASA 832
Query: 401 LTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMK 458
L N++ L ++NL+ N++ G L +K+ KL+++ ++ + ++ ++
Sbjct: 833 LRSNSSNLRELNLSENKVGDSGVKRLSAGLKDPHCKLEKLTLNYCGVSDASCADLASALR 892
Query: 459 S 459
S
Sbjct: 893 S 893
Score = 93 (37.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 45 LNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLT 102
L D I+ KG L AL S +L L+L ++ +G ++ L D + LE + L
Sbjct: 641 LFDCGISDKGCAALASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCKLEKLRLR 700
Query: 103 CNEISVQGGLDLVKAMK-NKTKLKQINVSEN-QFGEEGVEEMEKLMK 147
C +S +G DL ++ N + L+++ +S+N G+ GV+ + +K
Sbjct: 701 CCGVSDEGCADLASVLRSNSSNLRELELSKNINVGDSGVKLLSAGLK 747
Score = 89 (36.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 40/139 (28%), Positives = 56/139 (40%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+ L ELDLSDN GV+ L+ L+ C GC L+ AL
Sbjct: 780 SNLRELDLSDNKIVDSGVKRLSAGLKDPQCKLETLRLINCDVSG-KGCAALASALRS--N 836
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSD 343
SS L+ N++ + G K L+A K LE++ + G+ L+
Sbjct: 837 SSN-------LRELNLSENKVGDSGVKRLSAGLKDPHCKLEKLTLNYCGVSDASCADLAS 889
Query: 344 AFEENK-NLRHLNLNDNTI 361
A N NLR LNL N +
Sbjct: 890 ALRSNSSNLRELNLKWNRV 908
>UNIPROTKB|E9PFE0 [details] [associations]
symbol:CIITA "MHC class II transactivator" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001611 InterPro:IPR008095 PRINTS:PR01719
PROSITE:PS51450 GO:GO:0005524 GO:GO:0006355 InterPro:IPR025875
Pfam:PF12799 EMBL:AC133065 HGNC:HGNC:7067 IPI:IPI00641977
ProteinModelPortal:E9PFE0 SMR:E9PFE0 Ensembl:ENST00000381835
UCSC:uc002dak.4 ArrayExpress:E9PFE0 Bgee:E9PFE0 Uniprot:E9PFE0
Length = 546
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
++L A F L+ L+ + +N I G++ LS F + K+L LNL+ N IT GA L
Sbjct: 394 RILTA-FSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLA 452
Query: 371 QALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L ++
Sbjct: 453 EALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASL 512
Query: 430 K 430
+
Sbjct: 513 R 513
Score = 135 (52.6 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+ F L+ L+ + +N I G++ LS F + K L LNL+ N IT GA L +A
Sbjct: 395 ILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAEA 454
Query: 62 LSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
L L SL L+L + + GA S+A+ L D +L +++ N+ + G L +++
Sbjct: 455 LPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLR 513
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTI 361
N++ +EG L+A F +LK+LE + + QN I +G L++A +L L+L +N I
Sbjct: 413 NKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAEALPSLAASLLRLSLYNNCI 472
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
GA L + L + SL ++++ +AGA +A L
Sbjct: 473 CDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASL 512
>DICTYBASE|DDB_G0294533 [details] [associations]
symbol:roco5 "LRRK family protein kinase Roco5"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0035023 "regulation of Rho protein
signal transduction" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000219
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001806
InterPro:IPR001849 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR013684 InterPro:IPR017441 Pfam:PF00621 Pfam:PF07714
Pfam:PF08477 PRINTS:PR00449 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50011
PROSITE:PS51450 SMART:SM00233 dictyBase:DDB_G0294533 GO:GO:0005525
GO:GO:0005524 GO:GO:0007264 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003591
SMART:SM00369 GenomeReviews:CM000154_GR GO:GO:0030587 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 EMBL:AAFI02000111
GO:GO:0035023 InterPro:IPR025875 Pfam:PF12799 eggNOG:COG1100
HSSP:O43318 InterPro:IPR020859 PROSITE:PS51424 EMBL:AY232267
RefSeq:XP_001134523.1 ProteinModelPortal:Q1ZXD6
EnsemblProtists:DDB0232931 GeneID:8626589 KEGG:ddi:DDB_G0294533
OMA:SEREMNT Uniprot:Q1ZXD6
Length = 2800
Score = 129 (50.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLA 69
K++ H+ + QN I AL D N L ++L++NTI KG I L + PS+
Sbjct: 778 KSITHLTLSQNSINDPCAVALGDMLRYNHSLIQMDLSENTIADKGLISLIDGILSHPSIT 837
Query: 70 ILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLV 115
++ L + GA I+K L N TL + L N I+ G +++
Sbjct: 838 VVILTQNQITDTGAKHISKLLKFNQTLNALFLEDNNITQSMGAEII 883
Score = 67 (28.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
G++AL +L L+L +N I K P + KL SL LNL + ++S
Sbjct: 1140 GLSALPIEIGSISSLIELDLTNNRI--KDLPP---QIGKLSSLQTLNLSNNAIES----- 1189
Query: 397 IAKYLTDNTTLEDVNLTCNEISVQG 421
+ L+ TTL+ +N+T N IS G
Sbjct: 1190 LPWQLSQLTTLKVLNITGNPISFDG 1214
Score = 61 (26.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 46/194 (23%), Positives = 78/194 (40%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLL---SK 277
L T +L LD+S N I V L+ L+ T K L S
Sbjct: 1051 LGTLCKLNHLDISFNFIETINVNSLSQLVNLKVLMMQRNYFNRLPIEIFTRLKSLESFSI 1110
Query: 278 ALHDCYESSKKE-GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV 336
A C+ K+ +A+K A + L + G L + +L +++ N I
Sbjct: 1111 AGSPCFHPIKQRIYEAIAIK---ATKLDLSDCGLSALPIEIGSISSLIELDLTNNRIKD- 1166
Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 396
L + +L+ LNL++N I ++P LS+L +L +LN+ + GAS+
Sbjct: 1167 ----LPPQIGKLSSLQTLNLSNNAIE---SLPW--QLSQLTTLKVLNITGNPISFDGASN 1217
Query: 397 IAKYLTDNTTLEDV 410
+ D + +D+
Sbjct: 1218 AKISIPDVLSGDDL 1231
Score = 55 (24.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 315 AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 374
++ K+LK L+ +++ N + ++L E K L+ LN++ N ++ I LG L
Sbjct: 1003 SILKELKNLQILDLSNNQL-----SSLPSEISEMKELKLLNVSHNNLSSL-PIELG-TLC 1055
Query: 375 KLPSLAI 381
KL L I
Sbjct: 1056 KLNHLDI 1062
Score = 48 (22.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 32/115 (27%), Positives = 48/115 (41%)
Query: 339 TALSDAFEENKNLRHLNLND-NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
T S NK L L D + I+ + L LS L S I +L + L SSI
Sbjct: 943 TTSSTIINNNKGLLDLGSCDYSEISLQLLNKLNM-LS-LDSRRISDLKELYLDHNCISSI 1000
Query: 398 -AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 451
L + L+ ++L+ N++S L + +LK +NVS N +E
Sbjct: 1001 PVSILKELKNLQILDLSNNQLS-----SLPSEISEMKELKLLNVSHNNLSSLPIE 1050
>UNIPROTKB|F1LSE8 [details] [associations]
symbol:Ciita "Protein Ciita" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 IPI:IPI00391658 Ensembl:ENSRNOT00000030118
Uniprot:F1LSE8
Length = 1063
Score = 140 (54.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 910 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 968
Query: 370 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 969 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1028
Query: 429 MK 430
++
Sbjct: 1029 LQ 1030
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 2 LAAVFKKLKTLEHVEMP---QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
LA + +L+H+++ +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 909 LAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 968
Query: 59 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 969 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1028
Query: 118 MK 119
++
Sbjct: 1029 LQ 1030
>UNIPROTKB|G3V9V5 [details] [associations]
symbol:Ciita "Protein Ciita" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 KO:K08060 EMBL:CH474017 UniGene:Rn.162013
GeneID:85483 KEGG:rno:85483 RefSeq:NP_001257732.1
Ensembl:ENSRNOT00000064827 Uniprot:G3V9V5
Length = 1073
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 920 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 978
Query: 370 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 979 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1038
Query: 429 MK 430
++
Sbjct: 1039 LQ 1040
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 2 LAAVFKKLKTLEHVEMP---QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
LA + +L+H+++ +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 919 LAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 978
Query: 59 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 979 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1038
Query: 118 MK 119
++
Sbjct: 1039 LQ 1040
>UNIPROTKB|E2R142 [details] [associations]
symbol:CIITA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR008095 PRINTS:PR01719 GO:GO:0005524
GO:GO:0006355 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00660000095240 EMBL:AAEX03004543
Ensembl:ENSCAFT00000030075 Uniprot:E2R142
Length = 1128
Score = 139 (54.0 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
K+L A F L+ L+ + +N I G+ LS F K L LNL+ N+IT GA L
Sbjct: 976 KILEA-FSSLQHLDLDSLSENKIGDEGVEQLSATFPRLKALETLNLSQNSITDVGACKLA 1034
Query: 371 QALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+AL L PSL L+L + + GA S+A+ L D +L +++ N+ + G L ++
Sbjct: 1035 EALPSLAPSLLRLSLYNNYICDVGAESLAQVLPDMVSLRVLDVQYNKFTGAGAQQLAASL 1094
Query: 430 K 430
+
Sbjct: 1095 R 1095
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 2 LAAVFKKLKTLEHVEMP---QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
L + + +L+H+++ +N I G+ LS F K L LNL+ N+IT GA L
Sbjct: 974 LVKILEAFSSLQHLDLDSLSENKIGDEGVEQLSATFPRLKALETLNLSQNSITDVGACKL 1033
Query: 59 GQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+AL L PSL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1034 AEALPSLAPSLLRLSLYNNYICDVGAESLAQVLPDMVSLRVLDVQYNKFTGAGAQQLAAS 1093
Query: 118 MK 119
++
Sbjct: 1094 LR 1095
Score = 129 (50.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTI 361
N++ +EG + L+A F +LK LE + + QN I VG L++A +L L+L +N I
Sbjct: 995 NKIGDEGVEQLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAPSLLRLSLYNNYI 1054
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
GA L Q L + SL +L++ AGA +A L
Sbjct: 1055 CDVGAESLAQVLPDMVSLRVLDVQYNKFTGAGAQQLAASL 1094
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 114 LVKAMKNKTKLKQINV---SENQFGEEGVEEM 142
LVK ++ + L+ +++ SEN+ G+EGVE++
Sbjct: 974 LVKILEAFSSLQHLDLDSLSENKIGDEGVEQL 1005
>UNIPROTKB|F1PJN5 [details] [associations]
symbol:CIITA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046677 "response to antibiotic"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045345
"positive regulation of MHC class I biosynthetic process"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0034341 "response to interferon-gamma"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 GO:GO:0005524 GO:GO:0045944
GO:GO:0046677 GO:GO:0000122 GO:GO:0044212 GO:GO:0034341
InterPro:IPR007111 PROSITE:PS50837 OMA:PQAFPKL GO:GO:0045345
GeneTree:ENSGT00660000095240 EMBL:AAEX03004543
Ensembl:ENSCAFT00000030069 Uniprot:F1PJN5
Length = 1128
Score = 139 (54.0 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
K+L A F L+ L+ + +N I G+ LS F K L LNL+ N+IT GA L
Sbjct: 976 KILEA-FSSLQHLDLDSLSENKIGDEGVEQLSATFPRLKALETLNLSQNSITDVGACKLA 1034
Query: 371 QALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+AL L PSL L+L + + GA S+A+ L D +L +++ N+ + G L ++
Sbjct: 1035 EALPSLAPSLLRLSLYNNYICDVGAESLAQVLPDMVSLRVLDVQYNKFTGAGAQQLAASL 1094
Query: 430 K 430
+
Sbjct: 1095 R 1095
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 2 LAAVFKKLKTLEHVEMP---QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
L + + +L+H+++ +N I G+ LS F K L LNL+ N+IT GA L
Sbjct: 974 LVKILEAFSSLQHLDLDSLSENKIGDEGVEQLSATFPRLKALETLNLSQNSITDVGACKL 1033
Query: 59 GQALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+AL L PSL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1034 AEALPSLAPSLLRLSLYNNYICDVGAESLAQVLPDMVSLRVLDVQYNKFTGAGAQQLAAS 1093
Query: 118 MK 119
++
Sbjct: 1094 LR 1095
Score = 129 (50.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTI 361
N++ +EG + L+A F +LK LE + + QN I VG L++A +L L+L +N I
Sbjct: 995 NKIGDEGVEQLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAPSLLRLSLYNNYI 1054
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
GA L Q L + SL +L++ AGA +A L
Sbjct: 1055 CDVGAESLAQVLPDMVSLRVLDVQYNKFTGAGAQQLAASL 1094
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 114 LVKAMKNKTKLKQINV---SENQFGEEGVEEM 142
LVK ++ + L+ +++ SEN+ G+EGVE++
Sbjct: 974 LVKILEAFSSLQHLDLDSLSENKIGDEGVEQL 1005
>DICTYBASE|DDB_G0285563 [details] [associations]
symbol:DDB_G0285563 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285563 EMBL:AAFI02000079 eggNOG:KOG4308
RefSeq:XP_638127.1 ProteinModelPortal:Q54N16
EnsemblProtists:DDB0304945 GeneID:8625176 KEGG:ddi:DDB_G0285563
InParanoid:Q54N16 OMA:SNHIGDE Uniprot:Q54N16
Length = 283
Score = 130 (50.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 400
+S + E N + +N + I L + L K S+ L+ + + GA +IA
Sbjct: 136 ISMSLETNSTILSMNFEYCYLDNDSIIQLCRGLEKNKSIIELDFNNNKIGPQGALAIANM 195
Query: 401 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 450
L N ++E +NL+ NEI QG + + +K + ++N+S N G+EGV
Sbjct: 196 LKVNKSIETINLSNNEIGNQGAMSMADILKTTKRNVKLNLSSNHIGDEGV 245
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
+S + E N + +N + I L + L K S+ L+ + + GA +IA
Sbjct: 136 ISMSLETNSTILSMNFEYCYLDNDSIIQLCRGLEKNKSIIELDFNNNKIGPQGALAIANM 195
Query: 90 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
L N ++E +NL+ NEI QG + + +K + ++N+S N G+EGV
Sbjct: 196 LKVNKSIETINLSNNEIGNQGAMSMADILKTTKRNVKLNLSSNHIGDEGV 245
Score = 116 (45.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 29/138 (21%), Positives = 64/138 (46%)
Query: 12 LEHVEMP-QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
LE++ +P + + ++ E + L L+ ++ I K A + +L ++
Sbjct: 89 LENLLIPYKQSVLDQAFLSIQQIIENSTTLTTLDFSNIEIDKKRASLISMSLETNSTILS 148
Query: 71 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 130
+N C L + + + L N ++ +++ N+I QG L + +K ++ IN+S
Sbjct: 149 MNFEYCYLDNDSIIQLCRGLEKNKSIIELDFNNNKIGPQGALAIANMLKVNKSIETINLS 208
Query: 131 ENQFGEEGVEEMEKLMKS 148
N+ G +G M ++K+
Sbjct: 209 NNEIGNQGAMSMADILKT 226
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 29/138 (21%), Positives = 63/138 (45%)
Query: 323 LERVEMP-QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
LE + +P + + ++ E + L L+ ++ I K A + +L ++
Sbjct: 89 LENLLIPYKQSVLDQAFLSIQQIIENSTTLTTLDFSNIEIDKKRASLISMSLETNSTILS 148
Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
+N C L + + + L N ++ +++ N+I QG L + +K ++ IN+S
Sbjct: 149 MNFEYCYLDNDSIIQLCRGLEKNKSIIELDFNNNKIGPQGALAIANMLKVNKSIETINLS 208
Query: 442 ENQFGEEGVEEMEKLMKS 459
N+ G +G M ++K+
Sbjct: 209 NNEIGNQGAMSMADILKT 226
Score = 47 (21.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 221 LKTGARLVELDLSDNAFGPIGV 242
LKT R V+L+LS N G GV
Sbjct: 224 LKTTKRNVKLNLSSNHIGDEGV 245
>UNIPROTKB|P33076 [details] [associations]
symbol:CIITA "MHC class II transactivator" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0016605 "PML body" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003713 "transcription coactivator activity"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0046677 "response to antibiotic" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060333
"interferon-gamma-mediated signaling pathway" evidence=TAS]
[GO:0045345 "positive regulation of MHC class I biosynthetic
process" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045348 "positive regulation of MHC class II biosynthetic
process" evidence=IC] [GO:0034341 "response to interferon-gamma"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0032966 "negative regulation of collagen
biosynthetic process" evidence=IC] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR001611
InterPro:IPR008095 PRINTS:PR01719 PROSITE:PS51450 GO:GO:0005524
Reactome:REACT_6900 GO:GO:0005654 GO:GO:0060333 GO:GO:0032403
GO:GO:0045944 GO:GO:0046677 GO:GO:0032966 GO:GO:0006351
EMBL:CH471112 GO:GO:0000122 GO:GO:0044212 GO:GO:0003713
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
EMBL:X74301 EMBL:U18259 EMBL:AC133065 IPI:IPI00186224 PIR:A48843
RefSeq:NP_000237.2 UniGene:Hs.701991 ProteinModelPortal:P33076
SMR:P33076 IntAct:P33076 STRING:P33076 PhosphoSite:P33076
DMDM:218511957 PaxDb:P33076 PRIDE:P33076 DNASU:4261
Ensembl:ENST00000324288 GeneID:4261 KEGG:hsa:4261 UCSC:uc002dag.2
CTD:4261 GeneCards:GC16P010879 HGNC:HGNC:7067 HPA:CAB016084
MIM:209920 MIM:600005 neXtProt:NX_P33076 Orphanet:572
PharmGKB:PA30795 eggNOG:NOG269671 HOGENOM:HOG000107439
HOVERGEN:HBG000174 KO:K08060 OMA:PQAFPKL OrthoDB:EOG48PMJD
PhylomeDB:P33076 GenomeRNAi:4261 NextBio:16805 ArrayExpress:P33076
Bgee:P33076 CleanEx:HS_CIITA Genevestigator:P33076
GermOnline:ENSG00000179583 GO:GO:0045345 GO:GO:0045348
Uniprot:P33076
Length = 1130
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
++L A F L+ L+ + +N I G++ LS F + K+L LNL+ N IT GA L
Sbjct: 978 RILTA-FSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLA 1036
Query: 371 QALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L ++
Sbjct: 1037 EALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASL 1096
Query: 430 K 430
+
Sbjct: 1097 R 1097
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
+ F L+ L+ + +N I G++ LS F + K L LNL+ N IT GA L +A
Sbjct: 979 ILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAEA 1038
Query: 62 LSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 119
L L SL L+L + + GA S+A+ L D +L +++ N+ + G L +++
Sbjct: 1039 LPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLR 1097
Score = 120 (47.3 bits), Expect = 0.00096, P = 0.00096
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTI 361
N++ +EG L+A F +LK+LE + + QN I +G L++A +L L+L +N I
Sbjct: 997 NKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAEALPSLAASLLRLSLYNNCI 1056
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
GA L + L + SL ++++ +AGA +A L
Sbjct: 1057 CDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASL 1096
>RGD|1588619 [details] [associations]
symbol:Nlrp4f "NLR family, pyrin domain containing 4F"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] RGD:1588619 GO:GO:0005524 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837 IPI:IPI00765970
Ensembl:ENSRNOT00000050492 UCSC:RGD:1588619 Uniprot:D4A8A2
Length = 908
Score = 132 (51.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 55/203 (27%), Positives = 90/203 (44%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
LDLS ++ P GV+ L D+L + C + CKL + DC
Sbjct: 670 LDLSCSSLSPNGVKLLFDVLNQAEC--------NIEKLMVAHCKL---SPDDCKIFGSIL 718
Query: 290 GSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN 348
S LK+ N L N+G L + LE + + + LSD +N
Sbjct: 719 MSSKTLKILNLASNNL-NQGISSLCEGLCHPNCVLEYLVLANCSLSEQCWDYLSDVLRKN 777
Query: 349 KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 408
K L HL+++ N + KG L +AL+ LP +NL C + + G +A+ L +N L+
Sbjct: 778 KTLNHLDISCNDLKDKGIKILCKALT-LPD-CFMNLKHCQITTRGCQDLAEVLRNNQNLK 835
Query: 409 DVNLTCNEISVQGGLDLVKAMKN 431
++++ N++ G L A+K+
Sbjct: 836 HLHVSNNKLKDAGVKLLCDAIKH 858
Score = 50 (22.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/81 (22%), Positives = 36/81 (44%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 89
+ F +K ++ L + D + L ++L K PS + L + G + +
Sbjct: 602 ICSVFVRSKNIQTLQIKDTNFSEPTFRVLYESL-KYPSFPLSKLVANNVHFFGDNHMFFE 660
Query: 90 LTDNTTLEDVNLTCNEISVQG 110
L N L+ ++L+C+ +S G
Sbjct: 661 LIQNHNLQYLDLSCSSLSPNG 681
>MGI|MGI:1924386 [details] [associations]
symbol:Cep78 "centrosomal protein 78" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:1924386 GO:GO:0005737
GO:GO:0005813 eggNOG:NOG305219 GeneTree:ENSGT00390000013287
InterPro:IPR026212 PRINTS:PR02062 CTD:84131 HOGENOM:HOG000015235
HOVERGEN:HBG056294 OMA:FPLIKTR OrthoDB:EOG4DZ1TV EMBL:BC070400
IPI:IPI00421226 RefSeq:NP_932136.2 UniGene:Mm.105652
ProteinModelPortal:Q6IRU7 SMR:Q6IRU7 IntAct:Q6IRU7 STRING:Q6IRU7
PhosphoSite:Q6IRU7 PRIDE:Q6IRU7 Ensembl:ENSMUST00000047704
GeneID:208518 KEGG:mmu:208518 UCSC:uc008gwq.1 InParanoid:Q6IRU7
NextBio:372305 Bgee:Q6IRU7 CleanEx:MM_CEP78 Genevestigator:Q6IRU7
Uniprot:Q6IRU7
Length = 790
Score = 106 (42.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 29 ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
AL + LR+L LN + + L + LSK SL L+L +C + G I +
Sbjct: 116 ALRGCLSVSGVLRNLELNGLILRERDLTSLTKGLSKSTSLVHLSLANCPIGDGGLEIICQ 175
Query: 89 YLTDNTTLEDVNLT-CNEISVQGGLDLVKAMKNKT 122
+ ++ TL+ VN T CN ++ QG + K +K +T
Sbjct: 176 GIKNSVTLKTVNFTGCN-LTWQGACHMAKILKYQT 209
Score = 76 (31.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 351 LRHLNLNDNT-ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
LR + LN NT I +GA +LS+ L L+L C L S GA ++ + L N TL
Sbjct: 234 LRRITLNCNTLIGDQGASAFADSLSEDLWLRALDLQQCGLTSEGAKALLEALETNRTLVV 293
Query: 410 VNLTCNEI 417
+++ N +
Sbjct: 294 LDIRKNPL 301
Score = 61 (26.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 323 LERVEMPQNGIY-HVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
L R+ + N + G +A +D+ E+ LR L+L +T +GA L +AL +L +
Sbjct: 234 LRRITLNCNTLIGDQGASAFADSLSEDLWLRALDLQQCGLTSEGAKALLEALETNRTLVV 293
Query: 382 LNL 384
L++
Sbjct: 294 LDI 296
>UNIPROTKB|Q53B88 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9580 "Hylobates lar"
[GO:0002367 "cytokine production involved in immune response"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0016045 "detection of bacterium" evidence=ISS]
[GO:0019899 "enzyme binding" evidence=ISS] [GO:0019901 "protein
kinase binding" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032495 "response to muramyl dipeptide" evidence=ISS]
[GO:0032498 "detection of muramyl dipeptide" evidence=ISS]
[GO:0032500 "muramyl dipeptide binding" evidence=ISS] [GO:0032740
"positive regulation of interleukin-17 production" evidence=ISS]
[GO:0035556 "intracellular signal transduction" evidence=ISS]
[GO:0042742 "defense response to bacterium" evidence=ISS]
[GO:0042834 "peptidoglycan binding" evidence=ISS] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISS] [GO:0050700 "CARD domain binding" evidence=ISS]
[GO:0050718 "positive regulation of interleukin-1 beta secretion"
evidence=ISS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISS] [GO:0008180
"signalosome" evidence=ISS] InterPro:IPR001611 InterPro:IPR001315
Pfam:PF00619 PROSITE:PS50209 PROSITE:PS51450 SMART:SM00114
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0019901
GO:GO:0009986 GO:GO:0016045 GO:GO:0042981 GO:GO:0035556
GO:GO:0043123 GO:GO:0042742 GO:GO:0051092 GO:GO:0050718
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982
GO:GO:0042834 GO:GO:0050700 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0032740 GO:GO:0032500 GO:GO:0002367 GO:GO:0032498
HOVERGEN:HBG050792 EMBL:AY594161 EMBL:AY594150 EMBL:AY594151
EMBL:AY594152 EMBL:AY594153 EMBL:AY594154 EMBL:AY594155
EMBL:AY594156 EMBL:AY594157 EMBL:AY594158 EMBL:AY594159
EMBL:AY594160 ProteinModelPortal:Q53B88 Uniprot:Q53B88
Length = 1040
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 64/244 (26%), Positives = 111/244 (45%)
Query: 226 RLVELDLSDNAFGPIGVEGLADLLR-SSCCFAXXXXXXXXXXXXITGCKLLSKALHDC-- 282
R V L L N+ G IGVE L L + + C L + L
Sbjct: 791 RPVALQLDYNSVGDIGVEQLLPCLGVCKALYLRDNNISDRGICKLIECALHCEQLQKLVL 850
Query: 283 YESSKKEGSP------LALKV-FIA---GRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 332
+ + +G LA + F+A G N + GA++LA + +L+ + N
Sbjct: 851 FNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITPAGAQVLAEGLRGNTSLQFLGFWGNR 910
Query: 333 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 392
+ G AL++A ++++LR L+L N I GA L L+K L L L + ++
Sbjct: 911 VGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHIQDE 970
Query: 393 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 452
G S+A+ L N++L+ + L+ N I+ G L++A++ + ++ + N F +EE
Sbjct: 971 GVCSLAEGLKKNSSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGNIFS---LEE 1027
Query: 453 MEKL 456
++KL
Sbjct: 1028 VDKL 1031
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+ + N I G L++ N L+ L N + +GA L +AL SL L+L
Sbjct: 876 LRLGNNHITPAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLV 935
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 132
+ S GA ++A L N LE++ L N I +G L + +K + LK + +S N
Sbjct: 936 GNNIGSVGAQALALMLAKNVMLEELCLEENHIQDEGVCSLAEGLKKNSSLKILKLSNN 993
Score = 103 (41.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 34/138 (24%), Positives = 64/138 (46%)
Query: 20 NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 79
N I GI L + ++L+ L L +N +T A + + L+ + L LG+ +
Sbjct: 825 NNISDRGICKLIECALHCEQLQKLVLFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHIT 884
Query: 80 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 139
AGA +A+ L NT+L+ + N + +G L +A+ + L+ +++ N G G
Sbjct: 885 PAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGA 944
Query: 140 EEMEKLMKSFGMAAALVL 157
+ + ++ M L L
Sbjct: 945 QALALMLAKNVMLEELCL 962
Score = 91 (37.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQA 61
LA V + L+ +++ N + +G+ L K L L DN I+ +G L +
Sbjct: 782 LAFVLQHLRRPVALQLDYNSVGDIGVEQLLPCLGVCKALY---LRDNNISDRGICKLIEC 838
Query: 62 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
L L L + L A S+AK L + L N I+ G L + ++
Sbjct: 839 ALHCEQLQKLVLFNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITPAGAQVLAEGLRGN 898
Query: 122 TKLKQINVSENQFGEEGVEEMEKLM 146
T L+ + N+ G+EG + + + +
Sbjct: 899 TSLQFLGFWGNRVGDEGAQALAEAL 923
Score = 77 (32.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 362
N +++EG LA KK +L+ +++ N I ++G AL A E N + + L N +
Sbjct: 965 NHIQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGNIFS 1024
Query: 363 YKGAIPLG 370
+ LG
Sbjct: 1025 LEEVDKLG 1032
>MGI|MGI:2675377 [details] [associations]
symbol:Nlrp9b "NLR family, pyrin domain containing 9B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:2675377 GO:GO:0005524 GO:GO:0005737 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 OrthoDB:EOG4N04DB eggNOG:NOG148799 EMBL:AY596196
EMBL:AY360471 IPI:IPI00340432 IPI:IPI00471053 RefSeq:NP_918947.2
UniGene:Mm.277114 HSSP:P13489 ProteinModelPortal:Q66X22 SMR:Q66X22
STRING:Q66X22 PhosphoSite:Q66X22 PRIDE:Q66X22
Ensembl:ENSMUST00000073151 Ensembl:ENSMUST00000117909 GeneID:243874
KEGG:mmu:243874 UCSC:uc009fnt.1 UCSC:uc012fbm.1 CTD:243874
InParanoid:Q66X22 OMA:FGHDSEL NextBio:385990 Bgee:Q66X22
CleanEx:MM_NLRP9B Genevestigator:Q66X22 Uniprot:Q66X22
Length = 1003
Score = 131 (51.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 65/238 (27%), Positives = 100/238 (42%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+++ L L +N GV L ++L+ C I C L +AL
Sbjct: 748 SKVKHLSLVENPLKNKGVMSLCEMLKDPSCVLQSLMLSYCCLTFIA-CGHLYEAL----- 801
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSD 343
S K S L L G N LE+ G +L K TL+ + +P + +S
Sbjct: 802 LSNKHLSLLDL-----GSNFLEDTGVNLLCEALKDPNCTLKELWLPGCFLTSQCCEEISA 856
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYL 401
N+NL+ L L +N I G L +ALS P+ L L L C S +A L
Sbjct: 857 VLICNRNLKTLKLGNNNIQDTGVRQLCEALSH-PNCNLECLGLDLCEFTSDCCKDLALAL 915
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEG---VEEMEK 455
T TL +NL + G + L +A+ +K LK + + ++ F EE ++++EK
Sbjct: 916 TTCKTLNSLNLDWKTLDHSGLVVLCEALNHKRCNLKMLGLDKSAFSEESQTLLQDVEK 973
Score = 51 (23.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/92 (25%), Positives = 40/92 (43%)
Query: 58 LGQALSKLPSLAILNL-GDCLLKSAGASSIAKYLTDNTTLEDVNL-TCNEISVQGGLDLV 115
L L +LP L LNL G L A +E++ L C S G+ +
Sbjct: 684 LFHTLLQLPHLKYLNLYGTYLSMDVTEKLCAALRCSACRVEELLLGKCGISSKACGIIAI 743
Query: 116 KAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 147
+ +K +K +++ EN +GV + +++K
Sbjct: 744 SLINSK--VKHLSLVENPLKNKGVMSLCEMLK 773
>RGD|619813 [details] [associations]
symbol:Ciita "class II, major histocompatibility complex,
transactivator" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006954 "inflammatory response" evidence=IEP] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0016605 "PML body"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034341 "response to interferon-gamma" evidence=ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045348 "positive
regulation of MHC class II biosynthetic process" evidence=IEP;IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0046677 "response to antibiotic" evidence=ISO] [GO:0071346
"cellular response to interferon-gamma" evidence=IEP]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006954 GO:GO:0045944 GO:GO:0000122 GO:GO:0071346
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
HOGENOM:HOG000107439 HOVERGEN:HBG000174 GO:GO:0045348
UniGene:Rn.162013 EMBL:AF251305 IPI:IPI00190599
ProteinModelPortal:Q9GJE0 STRING:Q9GJE0 PRIDE:Q9GJE0
UCSC:RGD:619813 InParanoid:Q9GJE0 NextBio:617566
ArrayExpress:Q9GJE0 Genevestigator:Q9GJE0 Uniprot:Q9GJE0
Length = 1153
Score = 140 (54.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 1000 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 1058
Query: 370 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1059 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1118
Query: 429 MK 430
++
Sbjct: 1119 LQ 1120
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 2 LAAVFKKLKTLEHVEMP---QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
LA + +L+H+++ +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 999 LAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 1058
Query: 59 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1059 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1118
Query: 118 MK 119
++
Sbjct: 1119 LQ 1120
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 57 PLGQALSKLPSLAILNLGD 75
P G+AL++ SL +L GD
Sbjct: 48 PDGEALARKISLTLLEKGD 66
>UNIPROTKB|G3V6C0 [details] [associations]
symbol:Ciita "Class II, major histocompatibility complex,
transactivator, isoform CRA_c" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0034341 "response to interferon-gamma" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046677 "response to antibiotic" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 KO:K08060 OMA:PQAFPKL
GeneTree:ENSGT00660000095240 EMBL:CH474017 RefSeq:NP_445981.2
UniGene:Rn.162013 Ensembl:ENSRNOT00000003572 GeneID:85483
KEGG:rno:85483 Uniprot:G3V6C0
Length = 1153
Score = 140 (54.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 1000 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 1058
Query: 370 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1059 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1118
Query: 429 MK 430
++
Sbjct: 1119 LQ 1120
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 2 LAAVFKKLKTLEHVEMP---QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
LA + +L+H+++ +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 999 LAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 1058
Query: 59 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1059 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1118
Query: 118 MK 119
++
Sbjct: 1119 LQ 1120
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 57 PLGQALSKLPSLAILNLGD 75
P G+AL++ SL +L GD
Sbjct: 48 PDGEALARKISLTLLEKGD 66
>UNIPROTKB|F1MG35 [details] [associations]
symbol:CIITA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046677 "response to antibiotic" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045345 "positive
regulation of MHC class I biosynthetic process" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0034341 "response to interferon-gamma"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 GO:GO:0005524 GO:GO:0045944
GO:GO:0046677 GO:GO:0000122 GO:GO:0044212 InterPro:IPR025875
Pfam:PF12799 GO:GO:0034341 InterPro:IPR007111 PROSITE:PS50837
OMA:PQAFPKL GO:GO:0045345 GeneTree:ENSGT00660000095240
EMBL:DAAA02057466 EMBL:DAAA02057467 EMBL:DAAA02057468
EMBL:DAAA02057469 EMBL:DAAA02057470 IPI:IPI01001017
Ensembl:ENSBTAT00000027518 Uniprot:F1MG35
Length = 1162
Score = 138 (53.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 370
K+L A F L+ L+ + +N I G+ LS F + K L LNL+ N IT GA L
Sbjct: 1010 KILEA-FTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLA 1068
Query: 371 QALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
+AL L SL L+L + + AGA S+A L D +L +++ N+ + G L +
Sbjct: 1069 EALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGL 1128
Query: 430 KNKTKLKQI 438
+ ++K +
Sbjct: 1129 RKCPQVKTL 1137
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 2 LAAVFKKLKTLEHVEMP---QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
L + + +L+H+++ +N I G+ LS F + K L LNL+ N IT GA L
Sbjct: 1008 LVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKL 1067
Query: 59 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+AL L SL L+L + + AGA S+A L D +L +++ N+ + G L
Sbjct: 1068 AEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAG 1127
Query: 118 MKNKTKLKQI 127
++ ++K +
Sbjct: 1128 LRKCPQVKTL 1137
Score = 38 (18.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 59 GQALSKLPSLAILNLGD 75
G+AL++ SL +L GD
Sbjct: 50 GEALARKISLTLLEKGD 66
>MGI|MGI:2387183 [details] [associations]
symbol:Lrrc45 "leucine rich repeat containing 45"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005813 "centrosome" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2387183 GO:GO:0005813
EMBL:CH466558 EMBL:AL663030 GeneTree:ENSGT00640000091171 CTD:201255
eggNOG:NOG327240 HOGENOM:HOG000231243 HOVERGEN:HBG080193
OMA:SDHREAL OrthoDB:EOG4W0XD0 ChiTaRS:LRRC45 EMBL:AK153361
EMBL:BC023296 IPI:IPI00229879 RefSeq:NP_705773.2 UniGene:Mm.347545
ProteinModelPortal:Q8CIM1 SMR:Q8CIM1 PhosphoSite:Q8CIM1
PRIDE:Q8CIM1 Ensembl:ENSMUST00000026139 GeneID:217366
KEGG:mmu:217366 InParanoid:A2AC12 NextBio:375819 Bgee:Q8CIM1
CleanEx:MM_LRRC45 Genevestigator:Q8CIM1
GermOnline:ENSMUSG00000025145 Uniprot:Q8CIM1
Length = 670
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 47/188 (25%), Positives = 86/188 (45%)
Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
C+ L K LH KE LK + L EG+ +L +++ +++ N
Sbjct: 47 CRALGKLLH-------KE---TLLKELVLSDCMLSEEGSTLLFQGLCANTSVQHLDLKGN 96
Query: 332 GIYHVGITALSDAFEENKNLRHLNLNDNTI-TYKGAIP-LGQALSKLPSLAILNLGDCLL 389
+ G AL +NK+++ L L N + T++ A L+ +L L+L + +
Sbjct: 97 NLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEDAFATFCGGLAANSALRQLDLRNNQI 156
Query: 390 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 449
GA +A L NTTL+ ++L N I + GG LV + + L +++++ N +
Sbjct: 157 SHKGAEELALALKGNTTLQQLDLRWNNIGLLGGRALVNCLPSNRTLWKLDLAGNNIPGDI 216
Query: 450 VEEMEKLM 457
+ +E+ M
Sbjct: 217 LRAVEQAM 224
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 35/138 (25%), Positives = 69/138 (50%)
Query: 11 TLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTI-TYKGAIP-LGQALSKLPSL 68
+++H+++ N + G AL +NK ++ L L N + T++ A L+ +L
Sbjct: 87 SVQHLDLKGNNLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEDAFATFCGGLAANSAL 146
Query: 69 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
L+L + + GA +A L NTTL+ ++L N I + GG LV + + L +++
Sbjct: 147 RQLDLRNNQISHKGAEELALALKGNTTLQQLDLRWNNIGLLGGRALVNCLPSNRTLWKLD 206
Query: 129 VSENQFGEEGVEEMEKLM 146
++ N + + +E+ M
Sbjct: 207 LAGNNIPGDILRAVEQAM 224
Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
Identities = 40/169 (23%), Positives = 77/169 (45%)
Query: 295 LKVFIAGRNRL-ENEGAKMLAAVFKKLKTLER--VEMPQNGIYHVGITALSDAFEENKNL 351
++ F NRL E GA+ AV ++L L + +++ + AL + L
Sbjct: 1 MEEFRRSYNRLCEESGAEPQEAVLQQLHQLPKGGLDLTTQSLTVETCRALGKLLHKETLL 60
Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
+ L L+D ++ +G+ L Q L S+ L+L L++ GA ++ K L N +++ +
Sbjct: 61 KELVLSDCMLSEEGSTLLFQGLCANTSVQHLDLKGNNLRATGAEALGKLLRQNKSIQSLT 120
Query: 412 LTCNEISV--QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
L N + + + L+Q+++ NQ +G EE+ +K
Sbjct: 121 LEWNNLGTWEDAFATFCGGLAANSALRQLDLRNNQISHKGAEELALALK 169
>UNIPROTKB|F1PS71 [details] [associations]
symbol:NLRP13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
EMBL:AAEX03000720 Ensembl:ENSCAFT00000003975 Uniprot:F1PS71
Length = 1063
Score = 123 (48.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 302 RNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
RN+L +EG K L +L+ +++ G L++A N N++ L++ +N
Sbjct: 883 RNKLRDEGVKFLCKALSHPDCSLQNLDLSDCSFTADGCQELANALRHNHNMKILDIRNND 942
Query: 361 ITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
+ G L + L P L L L C L A ++ LT + +L ++NL N++
Sbjct: 943 VQDNGVKHLCEVLQD-PYCELNTLGLEKCNLTPACCQHLSSVLTSSKSLINLNLLENDLE 1001
Query: 419 VQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMK 458
G L KA+K KL+++ + + + VE +E+L +
Sbjct: 1002 PSGVSILWKALKKSMCKLQKLGLKKELYDLVKVE-LEELQE 1041
Score = 121 (47.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 301 GRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 359
G N L+++G ++L A + LER+ + + LS+A +NK+L HLNL N
Sbjct: 825 GFNPLQDDGVRLLCAALTHPECALERLVLWFCQLGAPSCRYLSEALLKNKSLTHLNLRRN 884
Query: 360 TITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
+ +G L +ALS SL L+L DC + G +A L N ++ +++ N++
Sbjct: 885 KLRDEGVKFLCKALSHPDCSLQNLDLSDCSFTADGCQELANALRHNHNMKILDIRNNDVQ 944
Query: 419 VQGGLDLVKAMKN 431
G L + +++
Sbjct: 945 DNGVKHLCEVLQD 957
Score = 59 (25.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 40 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS-IAKYL----TDNT 94
L HLNL+ N + +P+ + K + NL L+S G + + ++L + N+
Sbjct: 707 LTHLNLSSNNL----GVPVSTMIFKTLRHSACNLQYLWLESCGLTPLVCRHLFVELSRNS 762
Query: 95 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 131
++ ++L N++S GL M + LK++++ +
Sbjct: 763 SVSFLSLGDNDLSGMKGLQGPSGMSTSS-LKELSLEK 798
>UNIPROTKB|P59046 [details] [associations]
symbol:NLRP12 "NACHT, LRR and PYD domains-containing
protein 12" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0050718 "positive regulation of interleukin-1
beta secretion" evidence=NAS] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=NAS] [GO:0045381 "regulation of interleukin-18
biosynthetic process" evidence=NAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=NAS] [GO:0008588 "release of cytoplasmic sequestered
NF-kappaB" evidence=IDA] [GO:0050729 "positive regulation of
inflammatory response" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=NAS] [GO:0009968
"negative regulation of signal transduction" evidence=IDA]
[GO:0045751 "negative regulation of Toll signaling pathway"
evidence=IDA] [GO:0031953 "negative regulation of protein
autophosphorylation" evidence=IDA] [GO:0043124 "negative regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=IDA] [GO:0045409
"negative regulation of interleukin-6 biosynthetic process"
evidence=IDA] [GO:0050710 "negative regulation of cytokine
secretion" evidence=IDA] [GO:0050711 "negative regulation of
interleukin-1 secretion" evidence=IDA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IMP] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 EMBL:AY095146
EMBL:AY116204 GO:GO:0005524 GO:GO:0005737 GO:GO:0050728
GO:GO:0050729 GO:GO:0043124 GO:GO:0031953 GO:GO:0008656
GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0008588 GO:GO:0045409
GO:GO:0050711 eggNOG:NOG82860 HOGENOM:HOG000294064 EMBL:AY154467
EMBL:AY116205 EMBL:AY116206 EMBL:AY116207 EMBL:AF231021
EMBL:BC028069 IPI:IPI00020916 IPI:IPI00221203 IPI:IPI00221204
IPI:IPI00306878 IPI:IPI00413241 RefSeq:NP_150639.1
RefSeq:NP_653288.1 UniGene:Hs.631573 PDB:2L6A PDBsum:2L6A
ProteinModelPortal:P59046 SMR:P59046 IntAct:P59046 STRING:P59046
PhosphoSite:P59046 DMDM:34223733 PaxDb:P59046 PRIDE:P59046
DNASU:91662 Ensembl:ENST00000324134 Ensembl:ENST00000358661
Ensembl:ENST00000391772 Ensembl:ENST00000391773 GeneID:91662
KEGG:hsa:91662 UCSC:uc002qch.4 UCSC:uc010eqw.3 CTD:91662
GeneCards:GC19M054296 HGNC:HGNC:22938 HPA:HPA042981 MIM:609648
MIM:611762 neXtProt:NX_P59046 Orphanet:247868 PharmGKB:PA162397866
HOVERGEN:HBG063656 OrthoDB:EOG4TTGHK PhylomeDB:P59046
EvolutionaryTrace:P59046 GenomeRNAi:91662 NextBio:77368
ArrayExpress:P59046 Bgee:P59046 CleanEx:HS_NLRP12
Genevestigator:P59046 GermOnline:ENSG00000142405 GO:GO:0045751
GO:GO:0045381 Uniprot:P59046
Length = 1061
Score = 102 (41.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 62/220 (28%), Positives = 91/220 (41%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L T LVELDL+ NA +G+ L LR C + C+L + A
Sbjct: 823 LGTNPHLVELDLTGNALEDLGLRLLCQGLRHPVC--------RLRTLWLKICRLTAAA-- 872
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK----KLKTLERVEMPQNGIYHV 336
C E + +L+ N L + G +L + KL+TL R+ GI +
Sbjct: 873 -CDELASTLSVNQSLRELDLSLNELGDLGVLLLCEGLRHPTCKLQTL-RL-----GICRL 925
Query: 337 GITA---LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKS 391
G A LS + N NLR L+L+ N + G L + L P+ + L L C L +
Sbjct: 926 GSAACEGLSVVLQANHNLRELDLSFNDLGDWGLWLLAEGLQH-PACRLQKLWLDSCGLTA 984
Query: 392 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
++ L N TL D+ LT N + G L K + +
Sbjct: 985 KACENLYFTLGINQTLTDLYLTNNALGDTGVRLLCKRLSH 1024
Score = 81 (33.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIA 87
LS A NK L ++L+ N + + G + L + L + P L ++ L C L+S +A
Sbjct: 762 LSAALIANKNLTRMDLSGNGVGFPGMMLLCEGL-RHPQCRLQMIQLRKCQLESGACQEMA 820
Query: 88 KYLTDNTTLEDVNLTCNEISVQG 110
L N L +++LT N + G
Sbjct: 821 SVLGTNPHLVELDLTGNALEDLG 843
>MGI|MGI:2676630 [details] [associations]
symbol:Nlrp12 "NLR family, pyrin domain containing 12"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008588
"release of cytoplasmic sequestered NF-kappaB" evidence=ISO]
[GO:0009968 "negative regulation of signal transduction"
evidence=ISO] [GO:0031953 "negative regulation of protein
autophosphorylation" evidence=ISO] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=ISO]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISO] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043281 "regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045409 "negative
regulation of interleukin-6 biosynthetic process" evidence=ISO]
[GO:0045751 "negative regulation of Toll signaling pathway"
evidence=ISO] [GO:0050710 "negative regulation of cytokine
secretion" evidence=ISO] [GO:0050711 "negative regulation of
interleukin-1 secretion" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2676630 GO:GO:0005524
GO:GO:0005737 GO:GO:0050728 GO:GO:0043124 GO:GO:0031953
GO:GO:0032088 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0008588 GO:GO:0045409
GO:GO:0050711 GeneTree:ENSGT00700000104141 CTD:91662 GO:GO:0045751
EMBL:CAAA01093162 EMBL:CAAA01093166 EMBL:CAAA01193276 EMBL:AK149454
IPI:IPI00750318 RefSeq:NP_001028603.1 UniGene:Mm.277152
ProteinModelPortal:E9Q5R7 SMR:E9Q5R7 PRIDE:E9Q5R7
Ensembl:ENSMUST00000108653 GeneID:378425 KEGG:mmu:378425
OMA:YISCREL NextBio:400959 Bgee:E9Q5R7 Uniprot:E9Q5R7
Length = 1054
Score = 133 (51.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 61/236 (25%), Positives = 108/236 (45%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L+ LDLSDN+ G G+E L + L+ C + C LL A S
Sbjct: 765 LIRLDLSDNSIGVPGLELLCEGLQHPRC--------RLQMIQLRKC-LLEAAAGRSLASV 815
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD--- 343
S L +++ + G N LE+ G K+L + + R+ I H+G + D
Sbjct: 816 LSNNSYL-VELDLTG-NPLEDSGLKLLCQGLRH--PVCRLRTLWLKICHLGQASCEDLAS 871
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLT 402
+ N++L L+L N + G + L + LS L L LG C L S IA L
Sbjct: 872 TLKMNQSLLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIASVLQ 931
Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLM 457
NT L++++L+ N++ +G L + ++++T +L+++ + + E++ ++
Sbjct: 932 VNTCLQELDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDNCGLTSKACEDLSSIL 987
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 41/161 (25%), Positives = 80/161 (49%)
Query: 302 RNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
RN L ++G ++L + L+ + + + I L+ A N+NL L+L+DN+
Sbjct: 715 RNALGSQGVRLLCQGLRHASCKLQNLRLKRCQISGSACQDLAAAVIANRNLIRLDLSDNS 774
Query: 361 ITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS 418
I G L + L P L ++ L CLL++A S+A L++N+ L +++LT N +
Sbjct: 775 IGVPGLELLCEGLQH-PRCRLQMIQLRKCLLEAAAGRSLASVLSNNSYLVELDLTGNPLE 833
Query: 419 VQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMK 458
G L + +++ +L+ + + G+ E++ +K
Sbjct: 834 DSGLKLLCQGLRHPVCRLRTLWLKICHLGQASCEDLASTLK 874
Score = 48 (22.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 96 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVE 140
L+++ L +IS DL A+ L ++++S+N G G+E
Sbjct: 737 LQNLRLKRCQISGSACQDLAAAVIANRNLIRLDLSDNSIGVPGLE 781
>ZFIN|ZDB-GENE-110913-10 [details] [associations]
symbol:si:ch73-289h5.4 "si:ch73-289h5.4"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003877
Pfam:PF00622 ZFIN:ZDB-GENE-110913-10 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 InterPro:IPR003590 SMART:SM00368
EMBL:CABZ01013139 EMBL:CU694442 IPI:IPI00897710
Ensembl:ENSDART00000113296 GeneTree:ENSGT00700000104633
Uniprot:E7EXM5
Length = 1172
Score = 98 (39.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/141 (25%), Positives = 67/141 (47%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLA 69
L +++ N + G+ LSD ++ N KL L +T L AL S L
Sbjct: 717 LRELDLSNNDLQDSGVKLLSDGLKDPNCKLETLRFFMCKLTVNSCKSLSSALQSSNCVLR 776
Query: 70 ILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQI 127
L+LGD L+ +G ++ L + N LE + +++V L A+++ L+++
Sbjct: 777 ELDLGDNDLQDSGVKLLSDGLKSPNCKLEILRFVMCKLTVDSCESLSSALQSSNCVLREL 836
Query: 128 NVSENQFGEEGVEEMEKLMKS 148
++S+N + GV+ + +KS
Sbjct: 837 DLSDNDLQDSGVKHLFDELKS 857
Score = 86 (35.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 57/208 (27%), Positives = 86/208 (41%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L ELDLSDN GV+ L D L+S C + C+ LS AL
Sbjct: 833 LRELDLSDNDLQDSGVKHLFDELKSPNC-KLETLRFVMCKLTVDSCESLSLALQ------ 885
Query: 287 KKEGSP-LALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDA 344
SP L+ N L++ G K+L+ K LE + + + G LS A
Sbjct: 886 ----SPNCVLRELDLSDNDLQDSGVKLLSDGLKSPNCNLEILRLSGCMVTEEGCGFLSSA 941
Query: 345 FEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNL---GDCLLKSAGASSIA 398
N +LR L+L+ N G L + L P+ + LNL G+ + +AG
Sbjct: 942 LSSNPSHLRELDLSYNHPGDSGVKLLSEKLED-PNYTLDKLNLDHGGETRI-TAGLRKYV 999
Query: 399 KYLTDNTTLEDVNLTCNEIS--VQGGLD 424
++T + +L +E + V+G L+
Sbjct: 1000 CFVTLDPNAAHTHLVLSEENREVKGVLE 1027
>MGI|MGI:108445 [details] [associations]
symbol:Ciita "class II transactivator" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016605 "PML body"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034341 "response to interferon-gamma" evidence=ISO;IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045348 "positive
regulation of MHC class II biosynthetic process" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046677 "response to antibiotic" evidence=ISO]
InterPro:IPR008095 PRINTS:PR01719 MGI:MGI:108445 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0032403 GO:GO:0045944
GO:GO:0046677 GO:GO:0006351 GO:GO:0000122 GO:GO:0044212
InterPro:IPR025875 Pfam:PF12799 GO:GO:0034341 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 eggNOG:NOG269671 HOGENOM:HOG000107439
HOVERGEN:HBG000174 KO:K08060 OMA:PQAFPKL OrthoDB:EOG48PMJD
GO:GO:0045345 EMBL:AF000006 EMBL:AF000007 EMBL:AF042158
EMBL:AF042159 EMBL:AF100709 EMBL:AF100710 EMBL:U60653 EMBL:U46562
IPI:IPI00108982 IPI:IPI00115417 IPI:IPI00742270
RefSeq:NP_001230690.1 RefSeq:NP_031601.1 UniGene:Mm.249560
ProteinModelPortal:P79621 SMR:P79621 STRING:P79621
PhosphoSite:P79621 PRIDE:P79621 DNASU:12265
Ensembl:ENSMUST00000023147 GeneID:12265 KEGG:mmu:12265
UCSC:uc007ydr.1 UCSC:uc007yds.1 InParanoid:P79621 NextBio:280710
Bgee:P79621 CleanEx:MM_CIITA Genevestigator:P79621
GermOnline:ENSMUSG00000022504 Uniprot:P79621
Length = 1155
Score = 139 (54.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 310 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 369
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N IT GA L
Sbjct: 1002 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKL 1060
Query: 370 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 428
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1061 AEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASS 1120
Query: 429 MK 430
++
Sbjct: 1121 LQ 1122
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 2 LAAVFKKLKTLEHVEMP---QNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPL 58
LA + +L+H+++ +N I G++ LS F + K L LNL+ N IT GA L
Sbjct: 1001 LAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKL 1060
Query: 59 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 117
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1061 AEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASS 1120
Query: 118 MK 119
++
Sbjct: 1121 LQ 1122
Score = 135 (52.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTI 361
N++ ++G L+A F +LK LE + + QN I VG L++A K+L L+L +N I
Sbjct: 1022 NKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCI 1081
Query: 362 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 401
KGA L Q L + SL ++++ +AGA +A L
Sbjct: 1082 CDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSL 1121
Score = 39 (18.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 57 PLGQALSKLPSLAILNLGD 75
P G AL++ SL +L GD
Sbjct: 48 PDGDALARKISLTLLEKGD 66
>DICTYBASE|DDB_G0276463 [details] [associations]
symbol:DG1112 "leucine-rich repeat-containing protein
(LRR)" species:44689 "Dictyostelium discoideum" [GO:0051056
"regulation of small GTPase mediated signal transduction"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 PROSITE:PS50018
dictyBase:DDB_G0276463 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
SUPFAM:SSF48350 GO:GO:0051056 GenomeReviews:CM000151_GR
GO:GO:0005622 EMBL:AAFI02000015 Gene3D:1.10.506.10
RefSeq:XP_643130.1 ProteinModelPortal:Q869U6
EnsemblProtists:DDB0185082 GeneID:8620536 KEGG:ddi:DDB_G0276463
InParanoid:Q869U6 OMA:SENSIQR ProtClustDB:CLSZ2732877
Uniprot:Q869U6
Length = 1057
Score = 95 (38.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 35 EENKKLRHLNLNDNTITYK-GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL--- 90
+++ L +LNLN N K L LS LP+L L+L ++ S I +L
Sbjct: 764 DQSSCLENLNLNRNLFRSKEDTQSLSNCLSNLPNLLTLSLNKTMIPSDSIKEILSFLCGA 823
Query: 91 -TDNTTLEDV--NLTCNEISVQGGLDLVKAMKNKTKL-KQINVSENQFGEEGVEEM 142
+N ++ NL +E S+Q L N L K+I+ S+N + G++E+
Sbjct: 824 NNNNNNKNELFSNLIISENSIQRPLITNMISMNAFNLIKEIDFSDNDLTDGGIKEL 879
Score = 88 (36.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 31/133 (23%), Positives = 65/133 (48%)
Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGA------SSIAKYLTDN 404
++ ++ +DN +T G L ++L + LN+ C SAGA S+++ ++ +
Sbjct: 861 IKEIDFSDNDLTDGGIKELCRSLYGNQIITSLNINGCFRGSAGAQRSKAISALSSFINSS 920
Query: 405 TTLEDVNLTCNEISVQG------GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
++LE + + + S Q L L A T+LK++++S +QF G + K +
Sbjct: 921 SSLETLLMRGGQKSNQQLQRCIVPLLLSLAANLNTRLKKLDISNHQFSNFGANALSKAII 980
Query: 459 SFGMAAALVLEDD 471
+ L+L+++
Sbjct: 981 LNKSISTLILDNN 993
>UNIPROTKB|G3MYV6 [details] [associations]
symbol:Bt.111263 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 EMBL:DAAA02047820
EMBL:DAAA02047821 EMBL:DAAA02047822 EMBL:DAAA02047823
EMBL:DAAA02047824 EMBL:DAAA02047825 EMBL:DAAA02047826
Ensembl:ENSBTAT00000066236 Uniprot:G3MYV6
Length = 1037
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 56/219 (25%), Positives = 94/219 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L+ L LDLS N+ G+ +L S C C+ L+ L
Sbjct: 770 LRGDRHLTHLDLSSNSLDAAVSRGVFRMLGHSAC-GLKYLWLEKGNLSAAACEDLASLL- 827
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 339
+P ++ + G N L +EG ++L + + L+R+E+ +
Sbjct: 828 --------TSTPRLTRLCL-GLNPLGDEGVQLLCGSLTRPECVLQRLELWCCRLSTPSCR 878
Query: 340 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIA 398
LSDA +++L HLNL N++ G L AL + +L LNL C L AG +A
Sbjct: 879 HLSDALLRSRSLTHLNLRRNSLGDGGVKLLSSALGRADCALQSLNLSHCSLTVAGCRELA 938
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 437
L N L+ +++ N+I +G +L +K+ + + Q
Sbjct: 939 HALKHNGHLKILDVGNNDIQDEGVKELCSVLKSPSCVLQ 977
>MGI|MGI:3056570 [details] [associations]
symbol:Nlrp4b "NLR family, pyrin domain containing 4B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:3056570
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
HOGENOM:HOG000294064 HOVERGEN:HBG063656 EMBL:AY596198 EMBL:AY355342
EMBL:AK054426 IPI:IPI00226298 RefSeq:NP_766069.1 UniGene:Mm.95244
ProteinModelPortal:Q8C6J9 SMR:Q8C6J9 PhosphoSite:Q8C6J9
PRIDE:Q8C6J9 Ensembl:ENSMUST00000047809 Ensembl:ENSMUST00000117413
GeneID:210045 KEGG:mmu:210045 UCSC:uc009fdi.1 CTD:210045
eggNOG:KOG4308 InParanoid:Q8C6J9 OMA:SAMNCRE OrthoDB:EOG42FSKF
NextBio:372846 Bgee:Q8C6J9 CleanEx:MM_NLRP4B Genevestigator:Q8C6J9
Uniprot:Q8C6J9
Length = 863
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/122 (33%), Positives = 63/122 (51%)
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIA 398
LSD +NK+LR+LN++ N + +G L +AL+ LP+ A+ L+L C L A +A
Sbjct: 733 LSDVLRQNKSLRYLNISYNNLKDEGLKALCRALT-LPNSALHSLSLEACQLTGACCKDLA 791
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVE----EM 453
T L +NL N + G L KAMK++T L ++ + F + E EM
Sbjct: 792 STFTRYKCLRRINLAKNSLGFSGLFVLCKAMKDQTCTLYELKLRMADFDSDSQEFLLSEM 851
Query: 454 EK 455
E+
Sbjct: 852 ER 853
Score = 131 (51.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/122 (33%), Positives = 62/122 (50%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIA 87
LSD +NK LR+LN++ N + +G L +AL+ LP+ A+ L+L C L A +A
Sbjct: 733 LSDVLRQNKSLRYLNISYNNLKDEGLKALCRALT-LPNSALHSLSLEACQLTGACCKDLA 791
Query: 88 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVE----EM 142
T L +NL N + G L KAMK++T L ++ + F + E EM
Sbjct: 792 STFTRYKCLRRINLAKNSLGFSGLFVLCKAMKDQTCTLYELKLRMADFDSDSQEFLLSEM 851
Query: 143 EK 144
E+
Sbjct: 852 ER 853
>UNIPROTKB|Q5JTW2 [details] [associations]
symbol:CEP78 "Centrosomal protein of 78 kDa" species:9606
"Homo sapiens" [GO:0005813 "centrosome" evidence=IDA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] GO:GO:0005829 GO:GO:0005813 Reactome:REACT_115566
GO:GO:0000086 eggNOG:NOG305219 InterPro:IPR026212 PRINTS:PR02062
EMBL:AL353705 EMBL:BC091515 EMBL:BC128058 EMBL:AK022705
IPI:IPI00249529 IPI:IPI00647080 IPI:IPI00942857
RefSeq:NP_001092272.1 RefSeq:NP_115547.1 UniGene:Hs.374421
ProteinModelPortal:Q5JTW2 SMR:Q5JTW2 IntAct:Q5JTW2 STRING:Q5JTW2
PhosphoSite:Q5JTW2 DMDM:74742229 PRIDE:Q5JTW2
Ensembl:ENST00000376597 Ensembl:ENST00000376598
Ensembl:ENST00000424347 GeneID:84131 KEGG:hsa:84131 UCSC:uc004akx.2
UCSC:uc004aky.4 CTD:84131 GeneCards:GC09P080850 HGNC:HGNC:25740
neXtProt:NX_Q5JTW2 PharmGKB:PA134937066 HOGENOM:HOG000015235
HOVERGEN:HBG056294 OMA:FPLIKTR OrthoDB:EOG4DZ1TV ChiTaRS:CEP78
GenomeRNAi:84131 NextBio:73415 ArrayExpress:Q5JTW2 Bgee:Q5JTW2
CleanEx:HS_CEP78 Genevestigator:Q5JTW2 Uniprot:Q5JTW2
Length = 689
Score = 97 (39.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 29 ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
AL + L++L LN + + L + L+K SL L+L +C + G I +
Sbjct: 111 ALKGCLSISSVLKNLELNGLILRERDLTILAKGLNKSASLVHLSLANCPIGDGGLEIICQ 170
Query: 89 YLTDNTTLEDVNLT-CNEISVQGGLDLVKAMKNKT 122
+ + TL+ VN T CN ++ QG + K +K +T
Sbjct: 171 GIKSSITLKTVNFTGCN-LTWQGADHMAKILKYQT 204
Score = 79 (32.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 351 LRHLNLNDNTITYK-GAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLED 409
LR + LN NT+ GA +LS+ L L+L C L + GA ++ + L NTTL
Sbjct: 229 LRRITLNCNTLIGDLGACAFADSLSEDLWLRALDLQQCGLTNEGAKALLEALETNTTLVV 288
Query: 410 VNLTCNEISVQGGLDLV--KAMKNKTKLKQINVSENQF-GEEGVEEMEKLMK 458
+++ N + + V K ++N K SE Q+ V+E K K
Sbjct: 289 LDIRKNPLIDHSMMKAVIKKVLQNGRSAK----SEYQWITSPSVKEPSKTAK 336
>FB|FBgn0033369 [details] [associations]
symbol:CG8197 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] EMBL:AE013599
GO:GO:0022008 eggNOG:NOG309390 EMBL:BT124985 RefSeq:NP_610445.1
UniGene:Dm.16246 SMR:A1Z7N0 EnsemblMetazoa:FBtr0088661 GeneID:35912
KEGG:dme:Dmel_CG8197 UCSC:CG8197-RA FlyBase:FBgn0033369
InParanoid:A1Z7N0 OMA:SIGTHGG OrthoDB:EOG41JWVR GenomeRNAi:35912
NextBio:795786 Uniprot:A1Z7N0
Length = 387
Score = 101 (40.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 348 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
N R L + N I GA L + +S +L +L+L C + + G +AKYL L
Sbjct: 249 NSKFRRLRIACNKIGPDGAFFLLRGMSMGGNLELLDLSYCSIGTHGGEWVAKYLASCRRL 308
Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
+ ++L N++ ++ AMK + KL+++ + N F + +L+
Sbjct: 309 QVLHLNYNDMGPTAVNLILLAMKKQCKLEKLTLYGNHFDSRTAMIVRRLL 358
Score = 68 (29.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 25/108 (23%), Positives = 53/108 (49%)
Query: 37 NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILN----LGDCL-LKSAGASSIAKYLT 91
+K LR LN++ ++T + + K P + L+ LG L L + SS+ L
Sbjct: 159 SKTLRRLNVSSCSLTQFNFALIADGVYKSPGVRRLSANRLLGMSLSLDTEKISSVLSSLL 218
Query: 92 DNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEG 138
TL ++L E++ Q + + + + + +K +++ ++ N+ G +G
Sbjct: 219 MQNTLWALSLEHCELTAQDMIPIAEHLARTNSKFRRLRIACNKIGPDG 266
>UNIPROTKB|Q288C4 [details] [associations]
symbol:NLRP9 "NACHT, LRR and PYD domains-containing protein
9" species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524 GO:GO:0005737
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 HOGENOM:HOG000294064 HOVERGEN:HBG063656
OrthoDB:EOG4N04DB eggNOG:NOG148799 EMBL:DQ011673 EMBL:DQ092866
IPI:IPI00705662 RefSeq:NP_001019835.1 UniGene:Bt.32473
ProteinModelPortal:Q288C4 STRING:Q288C4 PRIDE:Q288C4 GeneID:520716
KEGG:bta:520716 CTD:338321 InParanoid:Q288C4 NextBio:20873163
Uniprot:Q288C4
Length = 996
Score = 92 (37.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 37 NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNT 94
N L+HLN +++++ A L +AL K P I L LG C + IA L N
Sbjct: 689 NPHLKHLNFYGSSLSHMDARQLCEAL-KHPMCNIEELMLGKCDITGEACEDIASVLVHNK 747
Query: 95 TLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLM 146
L ++L N + G L L +A+KN L+ + +S F + + +++
Sbjct: 748 KLNLLSLCENALKDDGVLVLCEALKNPDCALEALLLSHCCFSSAACDHLSQVL 800
Score = 87 (35.7 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 50/187 (26%), Positives = 73/187 (39%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L LDL N GV L + L+ C + + + +H S
Sbjct: 806 LTFLDLGSNVLKDEGVTTLCESLKHPSCNLQELWLMNCYFTSVCCVDIATVLIH-----S 860
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAF 345
+K LK G N++ + GAK L K K LE + + + L+ A
Sbjct: 861 EK------LKTLKLGNNKIYDAGAKQLCKALKHPKCKLENLGLEACELSPASCEDLASAL 914
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDN 404
K+L +NL T+ Y GA L +AL L SL +L L KS+ I LT
Sbjct: 915 TTCKSLTCVNLEWITLDYDGAAVLCEALVSLECSLQLLGLN----KSSYDEEIKMMLTQ- 969
Query: 405 TTLEDVN 411
+E++N
Sbjct: 970 --VEEMN 974
>UNIPROTKB|K7GQ78 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] EMBL:CU928276
Ensembl:ENSSSCT00000033324 GeneTree:ENSGT00660000095240
Gene3D:1.10.533.10 InterPro:IPR001315 InterPro:IPR011029
InterPro:IPR007111 Pfam:PF00619 SUPFAM:SSF47986 PROSITE:PS50209
PROSITE:PS50837 Uniprot:K7GQ78
Length = 845
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 34/134 (25%), Positives = 67/134 (50%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+++ N + G+ L F +L + L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVRELQPCFS---RLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLY 764
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ + GA +A+ L + L+ + L N+I+ +GG L +A+KN + ++ + NQ
Sbjct: 765 NNQITDVGARYVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQI 824
Query: 135 GEEGVEEMEKLMKS 148
G+EG + + +++
Sbjct: 825 GDEGAKAFAEALRN 838
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/182 (23%), Positives = 82/182 (45%)
Query: 283 YESSKKEGSPLALKVFIAGRNRLE-----NEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
YE+ ++ LA + A +L + L+ V + +++ N + G
Sbjct: 660 YETQSEKVGQLAARGICANYLKLTFCNACSADCSALSFVLHHFRKQLALDLDNNNLNDYG 719
Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
+ L F L + L+ N IT G L + L+K + L L + + GA +
Sbjct: 720 VRELQPCFSR---LTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYV 776
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
A+ L + L+ + L N+I+ +GG L +A+KN + ++ + NQ G+EG + + +
Sbjct: 777 ARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEAL 836
Query: 458 KS 459
++
Sbjct: 837 RN 838
>UNIPROTKB|F1SII2 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0050830 "defense
response to Gram-positive bacterium" evidence=IEA] [GO:0050700
"CARD domain binding" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0043123 GO:GO:0070374 GO:GO:0046330 GO:GO:0016323
GO:GO:0032755 GO:GO:0006919 GO:GO:0051092 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0002606 OMA:NDYGVRE GO:GO:0042228
GeneTree:ENSGT00660000095240 EMBL:CU928276
Ensembl:ENSSSCT00000018159 Uniprot:F1SII2
Length = 846
Score = 130 (50.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 34/134 (25%), Positives = 67/134 (50%)
Query: 15 VEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 74
+++ N + G+ L F +L + L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVRELQPCFS---RLTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLY 764
Query: 75 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 134
+ + GA +A+ L + L+ + L N+I+ +GG L +A+KN + ++ + NQ
Sbjct: 765 NNQITDVGARYVARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQI 824
Query: 135 GEEGVEEMEKLMKS 148
G+EG + + +++
Sbjct: 825 GDEGAKAFAEALRN 838
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/182 (23%), Positives = 82/182 (45%)
Query: 283 YESSKKEGSPLALKVFIAGRNRLE-----NEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 337
YE+ ++ LA + A +L + L+ V + +++ N + G
Sbjct: 660 YETQSEKVGQLAARGICANYLKLTFCNACSADCSALSFVLHHFRKQLALDLDNNNLNDYG 719
Query: 338 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 397
+ L F L + L+ N IT G L + L+K + L L + + GA +
Sbjct: 720 VRELQPCFSR---LTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYV 776
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
A+ L + L+ + L N+I+ +GG L +A+KN + ++ + NQ G+EG + + +
Sbjct: 777 ARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEAL 836
Query: 458 KS 459
++
Sbjct: 837 RN 838
>MGI|MGI:2443697 [details] [associations]
symbol:Nlrp4a "NLR family, pyrin domain containing 4A"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006952 "defense response"
evidence=RCA] MGI:MGI:2443697 GO:GO:0005524 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 HSSP:P10775 EMBL:AY596200 EMBL:AY355341
EMBL:AK087843 IPI:IPI00225222 RefSeq:NP_766484.1 UniGene:Mm.322356
ProteinModelPortal:Q8BU40 SMR:Q8BU40 PhosphoSite:Q8BU40
PRIDE:Q8BU40 Ensembl:ENSMUST00000068767 Ensembl:ENSMUST00000119386
GeneID:243880 KEGG:mmu:243880 CTD:243880 eggNOG:NOG150642
InParanoid:Q8BU40 OMA:INIRESE OrthoDB:EOG44J2KW NextBio:385994
Bgee:Q8BU40 CleanEx:MM_NLRP4A Genevestigator:Q8BU40 Uniprot:Q8BU40
Length = 982
Score = 104 (41.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIA 398
LS+ NK L HL+++ N + +G L +AL+ LP L L+L CL+ +G +A
Sbjct: 795 LSEVLRRNKTLSHLDISSNDLKDEGLKVLCRALT-LPDSVLKSLSLRHCLITISGCQDLA 853
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 431
+ L +N L + ++ N++ G L A+K+
Sbjct: 854 EVLRNNQNLVSLQVSNNKLEDTGVKLLCDAIKH 886
Score = 98 (39.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 303 NRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N L++EG K+L A+ L+ + + I G L++ N+NL L +++N +
Sbjct: 813 NDLKDEGLKVLCRALTLPDSVLKSLSLRHCLITISGCQDLAEVLRNNQNLVSLQVSNNKL 872
Query: 362 TYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
G L A+ K P+ + +LG C L A +A T TL +NL N +
Sbjct: 873 EDTGVKLLCDAI-KHPNCHLEDLGLEACELTGACCEDLASTFTQCKTLWAMNLLKNALDY 931
Query: 420 QGGLDLVKAMKNKT 433
G + L +A+K +T
Sbjct: 932 NGLVVLCEALKQQT 945
Score = 74 (31.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 20 NGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLL 78
N ++ V L +N L+HLNL+ +++ L LS+ ++ L + C +
Sbjct: 672 NNVFFVCEKYLFFELIQNCNLQHLNLSLTILSHSDVKLLCDVLSQAECNIEELVVAACSI 731
Query: 79 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 118
S A L N TL+ +NL N + +G L K++
Sbjct: 732 SSDDCKVFASVLISNKTLKHLNLASNTLD-KGIASLCKSL 770
>RGD|1598218 [details] [associations]
symbol:Nlrp14 "NLR family, pyrin domain containing 14"
species:10116 "Rattus norvegicus" [GO:0007283 "spermatogenesis"
evidence=ISO] GO:GO:0007283 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104427 IPI:IPI00958183
Ensembl:ENSRNOT00000051854 Uniprot:F1M918
Length = 737
Score = 129 (50.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 55/199 (27%), Positives = 84/199 (42%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
+ LDL D G GV+ L + L+ C +T C+ LSKAL +S+
Sbjct: 509 VTHLDLKDTDLGDNGVKTLCEALKYQGC-KLRVLRLESCDLNVTHCQNLSKAL----QSN 563
Query: 287 KKEGSPLALKVFI-AGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDA 344
+ VF+ N L N+G K L V + LER+ + G+ VG LS A
Sbjct: 564 RS-------LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSA 616
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLT 402
+ K L HL L N + +G L L + P +L L L C G+ ++
Sbjct: 617 LTKTKRLTHLCLAHNVLEDEGIELLSYTL-RHPRCTLQSLVLRCCYFTPIGSEHLSLLFR 675
Query: 403 DNTTLEDVNLTCNEISVQG 421
+L ++L N+++ G
Sbjct: 676 TTKSLIHLDLGFNKLADSG 694
>UNIPROTKB|E9PIM9 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] EMBL:AC137894
IPI:IPI00979739 ProteinModelPortal:E9PIM9 SMR:E9PIM9 PRIDE:E9PIM9
Ensembl:ENST00000527485 HGNC:HGNC:10074 ChiTaRS:RNH1
ArrayExpress:E9PIM9 Bgee:E9PIM9 GO:GO:0005737 Uniprot:E9PIM9
Length = 199
Score = 114 (45.2 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
L + + N + VG+ + + K++ L+L + +T G L L LP+L
Sbjct: 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 117
Query: 71 LNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+L D LL AG + + L D LE + L +S L ++ K K++ V
Sbjct: 118 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV 177
Query: 130 SENQFGEEGV 139
S N E GV
Sbjct: 178 SNNDINEAGV 187
Score = 111 (44.1 bits), Expect = 0.00045, P = 0.00045
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPL 369
K +++ + L + + N + VG+ + + ++ L+L + +T G L
Sbjct: 46 KDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVL 105
Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKA 428
L LP+L L+L D LL AG + + L D LE + L +S L
Sbjct: 106 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165
Query: 429 MKNKTKLKQINVSENQFGEEGV 450
++ K K++ VS N E GV
Sbjct: 166 LRAKPDFKELTVSNNDINEAGV 187
Score = 39 (18.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 229 ELDLSDNAFGPIGVEGLADLLRSSCC 254
EL +S+N GV L L+ S C
Sbjct: 174 ELTVSNNDINEAGVRVLCQGLKDSPC 199
>WB|WBGene00010641 [details] [associations]
symbol:crml-1 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0048841 "regulation of axon extension involved in
axon guidance" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IGI] [GO:0040011 "locomotion" evidence=IGI]
[GO:0035021 "negative regulation of Rac protein signal
transduction" evidence=IGI] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005886 GO:GO:0007411 GO:GO:0071688
GO:GO:0030334 GO:GO:0035021 GO:GO:0048841 eggNOG:NOG239526
OMA:EYFSMAV GeneTree:ENSGT00390000014487 EMBL:Z71264 PIR:T23427
RefSeq:NP_492024.1 ProteinModelPortal:Q21301 SMR:Q21301
STRING:Q21301 PaxDb:Q21301 EnsemblMetazoa:K07G5.1 GeneID:172455
KEGG:cel:CELE_K07G5.1 UCSC:K07G5.1 CTD:172455 WormBase:K07G5.1
InParanoid:Q21301 NextBio:875581 Uniprot:Q21301
Length = 998
Score = 98 (39.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 350 NLRHLNLNDNTITY--KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 407
N+ L N+ + K + + + S+ L LNL DC L A S + L TTL
Sbjct: 522 NMNQLKKNNKQVHVINKVLLDVVKLYSEEGCLEELNLSDCRL-GAYLSVLINTLAATTTL 580
Query: 408 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 458
+ ++++ NE+ G L KA++ L+ +++ N G +G ++ +K
Sbjct: 581 KSLDISGNEMGNFGARILSKALQVNVSLRSVSIDNNHIGADGFVDLATSIK 631
Score = 80 (33.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 35/158 (22%), Positives = 70/158 (44%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKK--LRHLNLNDNTIT-YKGAIP 57
++ +V +K + L+ +++ + IT L+ AF N+ L +L+L+ N I KG
Sbjct: 241 VVLSVIRKSQNLKKLQLRSCSLPKDFITLLASAFHNNQNACLEYLDLSRNPIDDKKGFTI 300
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN-TTLEDVNLTCNEISVQGG--LDL 114
L L +L L +N +C L + + L + T+ + + E+ + D
Sbjct: 301 LSSVLPRLNQLKYVNFSECQLSDKSINLLCTGLYNGMTSCKSGGMQLTELILSANPMKDD 360
Query: 115 VKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS--FG 150
+ + N + ++ F + G+ ++KL S FG
Sbjct: 361 ISGIINLVSIST-SLRVLDFSDTGIH-LDKLWNSLKFG 396
>DICTYBASE|DDB_G0276791 [details] [associations]
symbol:DDB_G0276791 "leucine-rich repeat-containing
protein (LRR)" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0276791
EMBL:AAFI02000019 eggNOG:NOG239526 ProtClustDB:CLSZ2430147
RefSeq:XP_642880.1 ProteinModelPortal:Q7KWW4
EnsemblProtists:DDB0233388 GeneID:8620746 KEGG:ddi:DDB_G0276791
InParanoid:Q7KWW4 OMA:ACILADC Uniprot:Q7KWW4
Length = 882
Score = 92 (37.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 36/135 (26%), Positives = 64/135 (47%)
Query: 10 KTLEHVEMPQNGIYHVGITALSDAFEENK--KLRHLNLNDNTITYKGAIPLGQALSKLP- 66
KT+ +E+ N + T + + + N L+ LNL++NT+ + + L L+
Sbjct: 303 KTITQLEIT-NLLTEQSFTPIGNFLKNNPFTSLQILNLSNNTMNNESVVGLCDGLANFNH 361
Query: 67 SLAILNLGDCLLKSAGASSIAKYLTDN----TTLEDVNLTCNEISVQGGLDLVKAMKNKT 122
SL LNL C + + G + + L N TLE++ L+ N G + + NKT
Sbjct: 362 SLLSLNLSGCSIPTKGVALLFNSLQKNFGMSLTLEELILSDNRFQ-DAGSSAMSSWLNKT 420
Query: 123 K----LKQINVSENQ 133
+ LK++ +S +Q
Sbjct: 421 RGYNRLKRLILSNSQ 435
Score = 85 (35.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 273 KLLSKALHDCYESSKKEGSPLALKVF-IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 331
K LS ALH + GS ++V I G N L + GA +LA + KTL+R+ + N
Sbjct: 606 KPLSSALHPLLLAV---GSSKTMQVLDIVG-NELNDHGACILADCLRHNKTLKRLYINGN 661
Query: 332 GIYHVGITALSDAF--EENKNLRHLNL 356
+VG +LS F N L HL+L
Sbjct: 662 KFTYVGWMSLSSPFIFYRNTTLLHLDL 688
Score = 82 (33.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 37/160 (23%), Positives = 75/160 (46%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALS-DAFE--ENKKLRHLNLNDNTITYKGAIP 57
M+A K L +E +++ +N I LS D E E+++ ++LNL+ + +
Sbjct: 440 MIAPSLKVLSCIESLDLSKNSINIQSCRTLSMDGLEGIESREFKNLNLSSCGLVGESIAT 499
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD------NTTLEDVNLTCNEISVQGG 111
L ALS+ L L L L ++ A A L + L ++L+ N + +
Sbjct: 500 LLVALSRNSKLHNLTLN--LQRNGFAQKTALILIQLLPQCAKSFLTGLDLSFNSFNARQL 557
Query: 112 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 151
D+V+++ T ++ +++ N + V ++ +L+K G+
Sbjct: 558 ADIVQSLMG-TCIESLDIGNNYLDSDLVLKVAELVKDNGL 596
Score = 76 (31.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 312 MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQ 371
+L AV KT++ +++ N + G L+D NK L+ L +N N TY G + L
Sbjct: 615 LLLAVGSS-KTMQVLDIVGNELNDHGACILADCLRHNKTLKRLYINGNKFTYVGWMSLSS 673
Query: 372 ALSKLPSLAILNL 384
+ +L+L
Sbjct: 674 PFIFYRNTTLLHL 686
>UNIPROTKB|F1MKL3 [details] [associations]
symbol:NLRP9 "NACHT, LRR and PYD domains-containing protein
9" species:9913 "Bos taurus" [GO:0005524 "ATP binding"
evidence=IEA] GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
OMA:NEIQDAG UniGene:Bt.32473 EMBL:DAAA02047732 EMBL:DAAA02047730
EMBL:DAAA02047731 IPI:IPI01017789 ProteinModelPortal:F1MKL3
Ensembl:ENSBTAT00000006201 Uniprot:F1MKL3
Length = 996
Score = 93 (37.8 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 37 NKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIAKYLTDNT 94
N L+HLN +++++ A L +AL K P I L LG C + IA L N
Sbjct: 689 NPHLKHLNFYGSSLSHMDARQLCEAL-KHPMCNIEELMLGKCDITGEACEDIASVLVHNK 747
Query: 95 TLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLM 146
L ++L N + G L L +A+KN L+ + +S F + + +++
Sbjct: 748 KLNLLSLCDNALKDDGVLVLCEALKNPDCALEALLLSHCCFSSAACDHLSQVL 800
Score = 85 (35.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 43/160 (26%), Positives = 62/160 (38%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L LDL N GV L + L+ C + + + +H S
Sbjct: 806 LTFLDLGSNVLKDEGVTTLCESLKHPSCNLQELWLMNCYFTSVCCVDIATVLIH-----S 860
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAF 345
+K LK G N++ + GAK L K K LE + + + L+ A
Sbjct: 861 EK------LKTLKLGNNKIYDAGAKQLCKALKHPKCKLENLGLEACELSPASCEDLASAL 914
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNL 384
K+L +NL T+ Y GA L +AL L SL +L L
Sbjct: 915 TTCKSLTCVNLEWITLDYDGAAVLCEALVSLECSLQLLGL 954
>RGD|1309415 [details] [associations]
symbol:Nlrp12 "NLR family, pyrin domain containing 12"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008588
"release of cytoplasmic sequestered NF-kappaB" evidence=ISO]
[GO:0009968 "negative regulation of signal transduction"
evidence=ISO] [GO:0031953 "negative regulation of protein
autophosphorylation" evidence=ISO] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=ISO]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=ISO] [GO:0045409 "negative regulation of
interleukin-6 biosynthetic process" evidence=ISO] [GO:0045751
"negative regulation of Toll signaling pathway" evidence=ISO]
[GO:0050710 "negative regulation of cytokine secretion"
evidence=ISO] [GO:0050711 "negative regulation of interleukin-1
secretion" evidence=ISO] [GO:0050728 "negative regulation of
inflammatory response" evidence=ISO] RGD:1309415 GO:GO:0005524
GO:GO:0005737 GO:GO:0050728 GO:GO:0043124 GO:GO:0031953
GO:GO:0032088 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0008588 GO:GO:0045409
GO:GO:0050711 GeneTree:ENSGT00700000104141 CTD:91662
OrthoDB:EOG4TTGHK GO:GO:0045751 IPI:IPI00205289
RefSeq:NP_001162613.1 UniGene:Rn.108865 ProteinModelPortal:D4A399
Ensembl:ENSRNOT00000043650 GeneID:292541 KEGG:rno:292541
UCSC:RGD:1309415 NextBio:634266 ArrayExpress:D4A399 Uniprot:D4A399
Length = 1054
Score = 130 (50.8 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 60/237 (25%), Positives = 110/237 (46%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L+ LDLS N+ G +G+E L + L+ C + C LL A S
Sbjct: 765 LIRLDLSGNSIGVLGLELLCEGLQHPMC--------RLQMIQLRKC-LLEAAAGRALASV 815
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD--- 343
S L +++ + G N LE+ G K+L + + R+ I H+G + D
Sbjct: 816 LSNNSHL-VELDLTG-NPLEDLGLKLLCQGLRH--PVCRLRTLWLKICHLGQASCEDLAS 871
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYL 401
+ N++L L+L N + GA+ L + L + P L L LG C L S + +A L
Sbjct: 872 TLKMNQSLMELDLGLNDLGDSGALLLCEGL-RHPDCKLQTLRLGICRLGSDACAGVASVL 930
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLM 457
NT L +++L+ N++ +G L + ++++T +L+++ + + E++ ++
Sbjct: 931 QVNTCLRELDLSFNDLGDRGLWLLGEGLRHQTCRLQKLWLDSCGLTSKACEDLSSVL 987
Score = 45 (20.9 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 78 LKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 136
L S G + + L N L+++ L IS DL A+ L ++++S N G
Sbjct: 718 LGSQGVRLLCQGLRHANCKLQNLRLKRCHISGSACQDLAAAIIANRNLIRLDLSGNSIGV 777
Query: 137 EGVE 140
G+E
Sbjct: 778 LGLE 781
>UNIPROTKB|H0YCR7 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
InterPro:IPR003590 SMART:SM00368 EMBL:AC137894 HGNC:HGNC:10074
ChiTaRS:RNH1 PRIDE:H0YCR7 Ensembl:ENST00000529768 Bgee:H0YCR7
Uniprot:H0YCR7
Length = 285
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 55/209 (26%), Positives = 90/209 (43%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHD-CY 283
A L EL L N G +G +A+L C I C + +K D C
Sbjct: 21 ASLRELALGSNKLGDVG---MAEL-----CPGLLHPSSRLRTLWIWECGITAKGCGDLCR 72
Query: 284 ESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALS 342
KE +LK N L +EGA++L + + LE + + + S
Sbjct: 73 VLRAKE----SLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 128
Query: 343 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 401
+N+ L L +++N + G L Q L + S L +L L DC + + SS+A L
Sbjct: 129 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 188
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
N +L +++L+ N + G L LV++++
Sbjct: 189 LANHSLRELDLSNNCLGDAGILQLVESVR 217
>MGI|MGI:3056600 [details] [associations]
symbol:Nlrp4e "NLR family, pyrin domain containing 4E"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:3056600
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
HOGENOM:HOG000294064 HOVERGEN:HBG063656 eggNOG:NOG150642
OrthoDB:EOG4N04DB EMBL:AY596197 EMBL:AC150900 IPI:IPI00471051
RefSeq:NP_001004194.2 UniGene:Mm.442342 ProteinModelPortal:Q66X19
SMR:Q66X19 PhosphoSite:Q66X19 PRIDE:Q66X19
Ensembl:ENSMUST00000076470 GeneID:446099 KEGG:mmu:446099 CTD:446099
InParanoid:Q66X19 OMA:SICRRIT NextBio:410926 Bgee:Q66X19
CleanEx:MM_NLRP4E Genevestigator:Q66X19 Uniprot:Q66X19
Length = 978
Score = 110 (43.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 272 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQ 330
C L + H E ++ + L + N L++EG K+L A+ L + +
Sbjct: 785 CSLSEECWHYLSEVLRRNKTLTHLDISF---NDLKDEGLKVLCGALTLPDSVLISLSVRY 841
Query: 331 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCL 388
I G L++ N+NLR+L +++N I G L A+ K P+ + N+G C
Sbjct: 842 CLITTSGCQDLAEVLRNNQNLRNLQISNNKIEDAGVKLLCDAI-KHPNCHLENIGLEACA 900
Query: 389 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 432
L A +A T TL +NL N + G + L +AMK +
Sbjct: 901 LTGACCEDLASSFTHCKTLLGINLQENALDHSGLVALFEAMKQQ 944
Score = 103 (41.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD--CLLKSAGASSIA 87
LS+ NK L HL+++ N + +G L AL+ LP +++L CL+ ++G +A
Sbjct: 795 LSEVLRRNKTLTHLDISFNDLKDEGLKVLCGALT-LPDSVLISLSVRYCLITTSGCQDLA 853
Query: 88 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ L +N L ++ ++ N+I G L A+K+
Sbjct: 854 EVLRNNQNLRNLQISNNKIEDAGVKLLCDAIKH 886
Score = 72 (30.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK---NLRHLNLND 358
LA+ F KTL + + +N + H G+ AL +A ++ + NLR L + D
Sbjct: 909 LASSFTHCKTLLGINLQENALDHSGLVALFEAMKQQQCTVNLRGLRITD 957
Score = 62 (26.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 27 ITALSD---AFE--ENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKS 80
+T L D FE +N++L+ LNL+ +++ L L++ ++ L + DC L
Sbjct: 674 VTLLCDNRLLFELIQNQRLQLLNLSLTFLSHNDVKLLCDVLNQAECNIEKLMVADCNLSP 733
Query: 81 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEE 137
L + L+ +NL+ N + +G L KA+ + LK + +++ EE
Sbjct: 734 DDCKVFVSVLISSKMLKHLNLSSNNLD-KGISSLSKALCHPDCVLKNLVLAKCSLSEE 790
>UNIPROTKB|E2QUG6 [details] [associations]
symbol:NLRP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003593 PROSITE:PS51450 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
EMBL:AAEX03000737 Ensembl:ENSCAFT00000004144 OMA:CEILRHP
Uniprot:E2QUG6
Length = 1081
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 41/132 (31%), Positives = 63/132 (47%)
Query: 303 NRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N L +E AK+L + K L+R+ + + LS A N+ L HL+L NT+
Sbjct: 840 NELPDESAKLLCTTLRHPKCFLQRLSLENCQLTEACCKELSSALIVNQRLTHLSLAKNTL 899
Query: 362 TYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
G L + LS P L +L L C + S G + ++ L N+ L ++L N I +
Sbjct: 900 GDDGVKLLCEGLS-YPDCQLQMLVLWYCSITSGGCNHLSTLLQQNSNLTHLDLGLNHIGI 958
Query: 420 QGGLDLVKAMKN 431
G L +A+KN
Sbjct: 959 TGLKFLCEALKN 970
>MGI|MGI:3028627 [details] [associations]
symbol:Nlrp9c "NLR family, pyrin domain containing 9C"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:3028627 GO:GO:0005524 GO:GO:0005737 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 OrthoDB:EOG4N04DB eggNOG:NOG148799 EMBL:AY596203
EMBL:AY360472 EMBL:AK145425 IPI:IPI00377942 IPI:IPI00471048
RefSeq:NP_001036077.1 UniGene:Mm.212174 UniGene:Mm.487767
ProteinModelPortal:Q66X01 SMR:Q66X01 PRIDE:Q66X01 DNASU:330490
Ensembl:ENSMUST00000041845 Ensembl:ENSMUST00000085944 GeneID:330490
KEGG:mmu:330490 UCSC:uc009fuj.1 UCSC:uc012fgb.1 CTD:330490
InParanoid:Q66X01 OMA:NEIQDAG NextBio:399411 Bgee:Q66X01
CleanEx:MM_NLRP9C Genevestigator:Q66X01 Uniprot:Q66X01
Length = 1004
Score = 123 (48.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 66/240 (27%), Positives = 99/240 (41%)
Query: 225 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 284
+++ L L +N GV L +L+ C I C L +AL
Sbjct: 749 SKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIA-CGHLYEAL----- 802
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVG--ITAL 341
S K S L L G N LE+ G +L K TL+ + +P G Y +
Sbjct: 803 LSNKHLSLLDL-----GSNFLEDIGVNLLCEALKYPNCTLKELWLP--GCYLTSECCEEI 855
Query: 342 SDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG-D-CLLKSAGASSIAK 399
S NKNL+ L L +N I G L +AL P + LG D C L + +A
Sbjct: 856 SAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCH-PKCKVQCLGLDMCELSNDCCEDLAL 914
Query: 400 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMK 458
L TL+ +NL N + G + L +A+ +K KL + + ++ F EE ++ + K
Sbjct: 915 ALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEK 974
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 64 KLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKT 122
++P L LNL L + + L +T +E++ L +IS + ++ +
Sbjct: 691 QIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEA-CGIMATFLINS 749
Query: 123 KLKQINVSENQFGEEGVEEMEKLMK 147
K+K +++ EN +GV + K++K
Sbjct: 750 KVKHLSLVENPLKNKGVMFLCKMLK 774
>UNIPROTKB|E9PMJ3 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
EMBL:AC137894 HGNC:HGNC:10074 ChiTaRS:RNH1 IPI:IPI00983412
ProteinModelPortal:E9PMJ3 SMR:E9PMJ3 PRIDE:E9PMJ3
Ensembl:ENST00000529306 ArrayExpress:E9PMJ3 Bgee:E9PMJ3
Uniprot:E9PMJ3
Length = 189
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
L + + N + VG+ + + K++ L+L + +T G L L LP+L
Sbjct: 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 117
Query: 71 LNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+L D LL AG + + L D LE + L +S L ++ K K++ V
Sbjct: 118 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV 177
Query: 130 SENQFGEEGV 139
S N E GV
Sbjct: 178 SNNDINEAGV 187
Score = 111 (44.1 bits), Expect = 0.00036, P = 0.00036
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPL 369
K +++ + L + + N + VG+ + + ++ L+L + +T G L
Sbjct: 46 KDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVL 105
Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKA 428
L LP+L L+L D LL AG + + L D LE + L +S L
Sbjct: 106 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165
Query: 429 MKNKTKLKQINVSENQFGEEGV 450
++ K K++ VS N E GV
Sbjct: 166 LRAKPDFKELTVSNNDINEAGV 187
>UNIPROTKB|P59045 [details] [associations]
symbol:NLRP11 "NACHT, LRR and PYD domains-containing
protein 11" species:9606 "Homo sapiens" [GO:0016715 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, reduced ascorbate as one donor, and
incorporation of one atom of oxygen" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR020611 GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 EMBL:CH471135
InterPro:IPR007111 PROSITE:PS50837 EMBL:AY095145 EMBL:AY226382
EMBL:AY154466 EMBL:AY168967 EMBL:AY168968 EMBL:AC008749
EMBL:AC012310 EMBL:BC034730 EMBL:AK090621 IPI:IPI00168280
IPI:IPI00221085 IPI:IPI00643777 RefSeq:NP_659444.2
UniGene:Hs.375039 ProteinModelPortal:P59045 SMR:P59045
STRING:P59045 PhosphoSite:P59045 DMDM:288558818 PaxDb:P59045
PRIDE:P59045 Ensembl:ENST00000360133 Ensembl:ENST00000443188
GeneID:204801 KEGG:hsa:204801 UCSC:uc002qlz.3 UCSC:uc002qmb.3
CTD:204801 GeneCards:GC19M056298 H-InvDB:HIX0015483 HGNC:HGNC:22945
HPA:HPA046402 MIM:609664 neXtProt:NX_P59045 PharmGKB:PA162397841
eggNOG:NOG146195 HOGENOM:HOG000294064 HOVERGEN:HBG100535
InParanoid:P59045 OMA:WFLISSR OrthoDB:EOG4WWRHR PhylomeDB:P59045
GenomeRNAi:204801 NextBio:90478 Bgee:P59045 CleanEx:HS_NLRP11
Genevestigator:P59045 GermOnline:ENSG00000179873 GO:GO:0016715
Uniprot:P59045
Length = 1033
Score = 116 (45.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 59/215 (27%), Positives = 92/215 (42%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 279
L +G L +L LS N G+ L D LL +C C L + L
Sbjct: 742 LISGGSLRKLTLSSNPLRSDGMNILCDALLHPNCTLISLVLVFCCLTENC--CSALGRVL 799
Query: 280 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKL-KTLERVEMPQNGIYHVGI 338
+ + ++ L L V NRL+N G +L F L T + E+ +G +
Sbjct: 800 --LFSPTLRQ---LDLCV-----NRLKNYG--VLHVTFPLLFPTCQLEELHLSGCFFSSD 847
Query: 339 TA--LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGA 394
++ N+ LR L + N I G L L + P+ ++N+G +C+L SA
Sbjct: 848 ICQYIAIVIATNEKLRSLEIGSNKIEDAGMQLLCGGL-RHPNCMLVNIGLEECMLTSACC 906
Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 429
S+A LT N TLE +NL N + G L++++
Sbjct: 907 RSLASVLTTNKTLERLNLLQNHLGNDGVAKLLESL 941
Score = 57 (25.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/126 (23%), Positives = 52/126 (41%)
Query: 34 FEENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTD 92
F + LR L++ DN + L +AL L L L + ++G + K L
Sbjct: 629 FYTMESLRELHIFDNDLNGISERILSKALEHSSCKLRTLKLS-YVSTASGFEDLLKALAR 687
Query: 93 NTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMKSFGM 151
N +L +++ C IS+ L + T ++ +++ + EE+ L+ S G
Sbjct: 688 NRSLTYLSINCTSISLNMFSLLHDILHEPTCQISHLSLMKCDLRASECEEIASLLISGGS 747
Query: 152 AAALVL 157
L L
Sbjct: 748 LRKLTL 753
>UNIPROTKB|E9PLZ3 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
EMBL:AC137894 HGNC:HGNC:10074 ChiTaRS:RNH1 IPI:IPI00975857
ProteinModelPortal:E9PLZ3 SMR:E9PLZ3 PRIDE:E9PLZ3
Ensembl:ENST00000529368 ArrayExpress:E9PLZ3 Bgee:E9PLZ3
Uniprot:E9PLZ3
Length = 194
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEENK-KLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 70
L + + N + VG+ + + K++ L+L + +T G L L LP+L
Sbjct: 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 117
Query: 71 LNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINV 129
L+L D LL AG + + L D LE + L +S L ++ K K++ V
Sbjct: 118 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV 177
Query: 130 SENQFGEEGV 139
S N E GV
Sbjct: 178 SNNDINEAGV 187
Score = 111 (44.1 bits), Expect = 0.00040, P = 0.00040
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 311 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPL 369
K +++ + L + + N + VG+ + + ++ L+L + +T G L
Sbjct: 46 KDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVL 105
Query: 370 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKA 428
L LP+L L+L D LL AG + + L D LE + L +S L
Sbjct: 106 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165
Query: 429 MKNKTKLKQINVSENQFGEEGV 450
++ K K++ VS N E GV
Sbjct: 166 LRAKPDFKELTVSNNDINEAGV 187
>UNIPROTKB|Q96CN5 [details] [associations]
symbol:LRRC45 "Leucine-rich repeat-containing protein 45"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
GO:GO:0005813 EMBL:BC014109 IPI:IPI00060474 RefSeq:NP_659436.1
UniGene:Hs.143774 ProteinModelPortal:Q96CN5 SMR:Q96CN5
IntAct:Q96CN5 PhosphoSite:Q96CN5 DMDM:74760765 PaxDb:Q96CN5
PRIDE:Q96CN5 DNASU:201255 Ensembl:ENST00000306688 GeneID:201255
KEGG:hsa:201255 UCSC:uc002kde.3 CTD:201255 GeneCards:GC17P079981
HGNC:HGNC:28302 HPA:HPA023372 HPA:HPA023382 HPA:HPA024768
neXtProt:NX_Q96CN5 PharmGKB:PA142671505 eggNOG:NOG327240
HOGENOM:HOG000231243 HOVERGEN:HBG080193 InParanoid:Q96CN5
OMA:SDHREAL OrthoDB:EOG4W0XD0 PhylomeDB:Q96CN5 ChiTaRS:LRRC45
GenomeRNAi:201255 NextBio:90107 Bgee:Q96CN5 CleanEx:HS_LRRC45
Genevestigator:Q96CN5 GermOnline:ENSG00000169683 Uniprot:Q96CN5
Length = 670
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 38/155 (24%), Positives = 74/155 (47%)
Query: 305 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI-TY 363
L EGA +L L +++ N + G AL ++NK+++ L L N++ T+
Sbjct: 70 LSEEGATLLLRGLCANTVLRFLDLKGNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLGTW 129
Query: 364 KGAIP-LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
A L+ +L L+L + + GA +A L NTTL+ ++L N + + GG
Sbjct: 130 DDAFATFCGGLAANGALQRLDLRNNQISHKGAEELALALKGNTTLQQLDLRWNNVGLLGG 189
Query: 423 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 457
L+ + + L +++++ N + + +E+ M
Sbjct: 190 RALMNCLPSNRTLWRLDLAGNNIPGDVLRAVEQAM 224
Score = 91 (37.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 43 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 102
L+L ++T + LG+ L + L L DC+L GA+ + + L NT L ++L
Sbjct: 35 LDLATQSLTVETCRALGKLLPRETLCTELVLSDCMLSEEGATLLLRGLCANTVLRFLDLK 94
Query: 103 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 135
N + G L K ++ ++ + + N G
Sbjct: 95 GNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLG 127
Score = 76 (31.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N++ ++GA+ LA K TL+++++ N + +G AL + N+ L L+L N I
Sbjct: 154 NQISHKGAEELALALKGNTTLQQLDLRWNNVGLLGGRALMNCLPSNRTLWRLDLAGNNI 212
>UNIPROTKB|F1RMK9 [details] [associations]
symbol:NLRP8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 OMA:DIFAKMN
EMBL:FP102565 Ensembl:ENSSSCT00000003679 Uniprot:F1RMK9
Length = 1015
Score = 131 (51.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 302 RNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 360
+N L+++GAK L + + L+R+ + + ++ A +NK LR L+L N+
Sbjct: 875 KNSLKDDGAKQLWDALQHTRHPLQRLVLRNCALTSDCCQNMASALNKNKTLRSLDLGFNS 934
Query: 361 ITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
+ G I L Q L S L +L L +CL S+ ++A L N +L ++L+ N+I
Sbjct: 935 LKDDGVIMLCQPLMDPDSGLQVLELENCLFTSSCCEAMASVLLSNQSLRYLDLSKNDIQC 994
Query: 420 QGGLDLVKAM-KNKTKLKQI 438
G L + + K K K+K I
Sbjct: 995 HGVRFLCETIQKKKGKVKVI 1014
Score = 40 (19.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDN 93
EN+ LR L + + + L L K P L L L DC + +A+ L N
Sbjct: 755 ENQHLRSLEIQATEVRCQVMEFLCHTL-KHPRCFLQCLRLEDCPFSPKNWADLARNLKSN 813
Query: 94 TTLEDVNL 101
L+ + L
Sbjct: 814 IHLKTLML 821
>UNIPROTKB|Q86W28 [details] [associations]
symbol:NLRP8 "NACHT, LRR and PYD domains-containing protein
8" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005524
GO:GO:0005737 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 HOGENOM:HOG000294064
EMBL:AY154463 EMBL:BK001109 IPI:IPI00219557 IPI:IPI00795887
RefSeq:NP_789781.2 UniGene:Hs.446925 ProteinModelPortal:Q86W28
SMR:Q86W28 PhosphoSite:Q86W28 DMDM:143355070 PRIDE:Q86W28
DNASU:126205 Ensembl:ENST00000291971 GeneID:126205 KEGG:hsa:126205
UCSC:uc002qmh.3 UCSC:uc010etg.3 CTD:126205 GeneCards:GC19P056460
H-InvDB:HIX0040052 HGNC:HGNC:22940 MIM:609659 neXtProt:NX_Q86W28
PharmGKB:PA162398028 eggNOG:NOG145701 HOVERGEN:HBG100536
InParanoid:Q86W28 OMA:DIFAKMN OrthoDB:EOG44BB1Q PhylomeDB:Q86W28
GenomeRNAi:126205 NextBio:81714 Bgee:Q86W28 CleanEx:HS_NLRP8
Genevestigator:Q86W28 Uniprot:Q86W28
Length = 1048
Score = 134 (52.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 61/216 (28%), Positives = 100/216 (46%)
Query: 231 DLSDNAFGPIGVEGLADLLRSSC--CFAXXXXXXXXXXXXITGCKLLS---KALHDCYES 285
DL +N G ++ L L ++S C A I C L ++L C
Sbjct: 807 DLGNNLQGNGHLKTLI-LRKNSLENCGAYYLSVAQLERLSIENCNLTQLTCESLASCLRQ 865
Query: 286 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDA 344
SK + L+L N L++EGAK + L+ L+R+ + + + + A
Sbjct: 866 SKML-THLSL-----AENALKDEGAKHIWNALPHLRCPLQRLVLRKCDLTFNCCQDMISA 919
Query: 345 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLT 402
+NK L+ L+L+ N++ G I L +AL K P +L IL L +CL S ++A L
Sbjct: 920 LCKNKTLKSLDLSFNSLKDDGVILLCEAL-KNPDCTLQILELENCLFTSICCQAMASMLR 978
Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 438
N L ++L+ N I V G L L +A ++ K +++
Sbjct: 979 KNQHLRHLDLSKNAIGVYGILTLCEAFSSQKKREEV 1014
Score = 130 (50.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 52/180 (28%), Positives = 80/180 (44%)
Query: 272 CKLLSKALHDCYESSK---KEGSPLA----LKVFIAGRNRLENEGAKMLAAVFKKLKTLE 324
C+L L DC + + G+ L LK I +N LEN GA L+ LE
Sbjct: 788 CRLQCLRLEDCLATPRIWTDLGNNLQGNGHLKTLILRKNSLENCGAYYLSVA-----QLE 842
Query: 325 RVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILN 383
R+ + + + +L+ ++K L HL+L +N + +GA + AL L L L
Sbjct: 843 RLSIENCNLTQLTCESLASCLRQSKMLTHLSLAENALKDEGAKHIWNALPHLRCPLQRLV 902
Query: 384 LGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 443
L C L + L N TL+ ++L+ N + G + L +A+KN QI EN
Sbjct: 903 LRKCDLTFNCCQDMISALCKNKTLKSLDLSFNSLKDDGVILLCEALKNPDCTLQILELEN 962
Score = 40 (19.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 223 TGARLVELDLSDNAFGPIGVEGLADLLRSSCC 254
T +L L ++++ GP ++ LA LR C
Sbjct: 701 TNDKLEVLTMTNSVLGPPFLKALAAALRHPQC 732
Score = 37 (18.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 8 KLKTLEHV--EMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTI 50
KL + H E P++ H L F N KL L + ++ +
Sbjct: 671 KLSSSSHPGSEAPESNGLHRWWQDLCSVFATNDKLEVLTMTNSVL 715
>UNIPROTKB|E1B8B1 [details] [associations]
symbol:LRRC45 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] GO:GO:0005813
GeneTree:ENSGT00640000091171 CTD:201255 OMA:SDHREAL
EMBL:DAAA02049407 EMBL:DAAA02049408 EMBL:DAAA02049409
EMBL:DAAA02049410 IPI:IPI00840853 RefSeq:XP_003583683.1
UniGene:Bt.45080 Ensembl:ENSBTAT00000042654 GeneID:514524
KEGG:bta:514524 Uniprot:E1B8B1
Length = 644
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 42/170 (24%), Positives = 79/170 (46%)
Query: 295 LKVFIAGRNRLENE-GAKMLAAVFKKLKTLE--RVEMPQNGIYHVGITALSDAFEENKNL 351
++ F +RL E G + V ++L L R+++ + AL ++ L
Sbjct: 1 MEEFRRAYSRLCKESGTEPQETVLQQLHQLPQGRLDLATQSLTVDTCRALGKLLQKESLL 60
Query: 352 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 411
L L+D ++ +GA L Q L ++ L+L L++AGA ++AK L N +++ +
Sbjct: 61 TELILSDCMLSEEGATLLLQGLCVNTAVRFLDLKGNNLRAAGAEALAKLLRQNKSIQSLT 120
Query: 412 LTCNEISV--QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 459
L N + + A+ L+Q+++ NQ +G EE+ +KS
Sbjct: 121 LEWNNLGTWDEAFATFCGALAANGALRQLDLRNNQINHKGAEELALALKS 170
Score = 118 (46.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 29 ALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 88
AL ++ L L L+D ++ +GA L Q L ++ L+L L++AGA ++AK
Sbjct: 49 ALGKLLQKESLLTELILSDCMLSEEGATLLLQGLCVNTAVRFLDLKGNNLRAAGAEALAK 108
Query: 89 YLTDNTTLEDVNLTCNEISV--QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 146
L N +++ + L N + + A+ L+Q+++ NQ +G EE+ +
Sbjct: 109 LLRQNKSIQSLTLEWNNLGTWDEAFATFCGALAANGALRQLDLRNNQINHKGAEELALAL 168
Query: 147 KS 148
KS
Sbjct: 169 KS 170
Score = 49 (22.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSS 252
LK+ A L +LDL N G +G L + L S+
Sbjct: 168 LKSNASLQQLDLRWNHIGLLGGRALVNCLPSN 199
>ZFIN|ZDB-GENE-071116-6 [details] [associations]
symbol:ciita "class II, major histocompatibility
complex, transactivator" species:7955 "Danio rerio" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR008095
PRINTS:PR01719 ZFIN:ZDB-GENE-071116-6 GO:GO:0005524 GO:GO:0006355
InterPro:IPR007111 PROSITE:PS50837 CTD:4261 KO:K08060
GeneTree:ENSGT00660000095240 EMBL:CU695195 IPI:IPI00859206
RefSeq:XP_001343072.2 UniGene:Dr.114302 UniGene:Dr.156689
Ensembl:ENSDART00000130281 GeneID:100003537 KEGG:dre:100003537
NextBio:20785877 Uniprot:E7F3F4
Length = 1044
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 43/144 (29%), Positives = 69/144 (47%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSK 64
V L++L +++ +N I G LS + L+ L L+ N I G L QAL+
Sbjct: 897 VLPSLQSLLCLDLDKNHIGDSGAEKLSGVLHFLECLKLLILSQNLIGDAGVGKLAQALAS 956
Query: 65 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 124
+PSL L L + +GA +A L D +L+D+++ N+ + G L A+KN +
Sbjct: 957 VPSLQTLRLYGNAIADSGAEHLALALPDMKSLQDLDVKFNKFTDIGATKLSAALKNCPGM 1016
Query: 125 KQINVSENQFGEEGVEEMEKLMKS 148
K + + N GV E +L S
Sbjct: 1017 KSLELWNNCI-PYGVFEHLRLQDS 1039
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 43/144 (29%), Positives = 69/144 (47%)
Query: 316 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 375
V L++L +++ +N I G LS + L+ L L+ N I G L QAL+
Sbjct: 897 VLPSLQSLLCLDLDKNHIGDSGAEKLSGVLHFLECLKLLILSQNLIGDAGVGKLAQALAS 956
Query: 376 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 435
+PSL L L + +GA +A L D +L+D+++ N+ + G L A+KN +
Sbjct: 957 VPSLQTLRLYGNAIADSGAEHLALALPDMKSLQDLDVKFNKFTDIGATKLSAALKNCPGM 1016
Query: 436 KQINVSENQFGEEGVEEMEKLMKS 459
K + + N GV E +L S
Sbjct: 1017 KSLELWNNCI-PYGVFEHLRLQDS 1039
>UNIPROTKB|F1RNK5 [details] [associations]
symbol:NLRP12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0050711 "negative regulation of interleukin-1
secretion" evidence=IEA] [GO:0045751 "negative regulation of Toll
signaling pathway" evidence=IEA] [GO:0045409 "negative regulation
of interleukin-6 biosynthetic process" evidence=IEA] [GO:0043124
"negative regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0031953 "negative
regulation of protein autophosphorylation" evidence=IEA]
[GO:0008588 "release of cytoplasmic sequestered NF-kappaB"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GO:GO:0005524 GO:GO:0005737
GO:GO:0050728 GO:GO:0043124 GO:GO:0031953 GO:GO:0032088
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0008588 GO:GO:0045409 GO:GO:0050711
GeneTree:ENSGT00700000104141 GO:GO:0045751 OMA:GICRLSS
EMBL:CU392841 Ensembl:ENSSSCT00000003611 Uniprot:F1RNK5
Length = 1058
Score = 105 (42.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 56/237 (23%), Positives = 103/237 (43%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
LV +DLS N+ G GV+ L LR C + C+L + A C E +
Sbjct: 769 LVRMDLSGNSLGLPGVKLLCKGLRHPKC--------RLQMVQLRKCQLEAGA---CQEIA 817
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD--- 343
S L+ N LE+ G ++L + + R+ + I + A D
Sbjct: 818 SVLSSSRHLEELDLTGNALEDSGLRLLCQGLRH--PVCRLRILWLKICQLSAAACEDLAA 875
Query: 344 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYL 401
N++L L+L+ N + G + L + L + P L L LG C L SA ++ L
Sbjct: 876 TLSGNQSLMELDLSLNELGDPGVLLLCEGL-RHPQCKLQTLRLGICRLSSAACEGLSAVL 934
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLM 457
N L++++L+ N++ G L + +++ T +L+++ + + E++ ++
Sbjct: 935 QVNHHLQELDLSFNDLGDCGMSLLCEGLRHPTCRLQKLWLDSCGLTAKACEDLSSML 991
Score = 67 (28.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 58 LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVK 116
L ALS P+L L L L S G + + L N L+++ L +IS DL
Sbjct: 702 LAAALSTSPNLVELVLYSNALGSRGVKLLCQGLGHPNCNLQNLRLKRCQISSSACQDLAL 761
Query: 117 AMKNKTKLKQINVSENQFGEEGVE 140
A+ L ++++S N G GV+
Sbjct: 762 ALIANKHLVRMDLSGNSLGLPGVK 785
>MGI|MGI:2675292 [details] [associations]
symbol:Nlrp9a "NLR family, pyrin domain containing 9A"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:2675292 GO:GO:0005524 GO:GO:0005737 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 HSSP:P10775 EMBL:AY596202 EMBL:AY364009
IPI:IPI00377936 IPI:IPI00471049 RefSeq:NP_001041685.1
UniGene:Mm.11889 ProteinModelPortal:Q66X03 SMR:Q66X03 PRIDE:Q66X03
DNASU:233001 Ensembl:ENSMUST00000117252 GeneID:233001
KEGG:mmu:233001 UCSC:uc012fge.1 CTD:233001 eggNOG:NOG148799
NextBio:381438 Bgee:Q66X03 CleanEx:MM_NLRP9A Genevestigator:Q66X03
Uniprot:Q66X03
Length = 949
Score = 118 (46.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 66/240 (27%), Positives = 100/240 (41%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
L L +N GV L ++L+ C I C L +AL S +
Sbjct: 699 LSLVENPLKNKGVMSLCEMLKDPSCVLESLMLSYCCLTFIA-CGHLYEAL-----LSNEH 752
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVG--ITALSDAFE 346
S L L G N LE+ G +L K TL+ + +P G Y +S
Sbjct: 753 LSLLDL-----GSNFLEDTGVNLLCEALKDPNCTLKELWLP--GCYLTSECCEEISAVLT 805
Query: 347 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDN 404
N NL+ L L +N I G L +AL P+ + L L C S +A LT
Sbjct: 806 CNTNLKTLKLGNNNIQDTGVKRLCEALCH-PNCEMQCLGLDMCDFTSDCCEDLALVLTTC 864
Query: 405 TTLEDVNLTCNEISVQGGLDLV-KAMKNKT-KLKQINVSENQFGEEG---VEEMEKLMKS 459
TL+ +NL N GL+++ KA+ +K L+ + + ++ F EE ++ +EK K+
Sbjct: 865 NTLKSLNLDWNAFD-HSGLEMLCKALNHKACNLEVLGLDKSLFSEESQTLLQAVEKKNKN 923
Score = 52 (23.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 65 LPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTK 123
LP L +NL L + + L +T +E++ L +IS + ++ A ++
Sbjct: 637 LPHLKYMNLYGTNLSNDAVERLCSALKFSTCGVEELLLGKCDISSEA-CGIIAASLINSE 695
Query: 124 LKQINVSENQFGEEGVEEMEKLMK 147
+K +++ EN +GV + +++K
Sbjct: 696 VKHLSLVENPLKNKGVMSLCEMLK 719
>ZFIN|ZDB-GENE-110913-19 [details] [associations]
symbol:si:dkey-156k2.3 "si:dkey-156k2.3"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 ZFIN:ZDB-GENE-110913-19 GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR007111 PROSITE:PS50837
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101971 EMBL:BX324126 EMBL:BX465205
EMBL:BX957251 Ensembl:ENSDART00000150746 Uniprot:H0WFD4
Length = 1252
Score = 115 (45.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 59/226 (26%), Positives = 94/226 (41%)
Query: 227 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 286
L ELDLS+N GV+ L+D L+S C C+ LS AL
Sbjct: 776 LRELDLSNNDLQDSGVKLLSDGLKSPNC-KLETLRFVLCNITADSCESLSSAL------- 827
Query: 287 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAF 345
+ S L+ N L++ G K+L+ K LE + + + +LS A
Sbjct: 828 --QSSNCVLRELDLSNNGLQDSGVKLLSDGLKSPDFKLETLSLQGCNLTTQSFESLSSAL 885
Query: 346 EE-NKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYL- 401
+ N LR L+L++N + + L L K P+ L L L C L S++ L
Sbjct: 886 QSSNCVLRELDLSNNDLQHSAVKLLSDGL-KSPNCKLETLRLQWCKLTVQSCESLSSALQ 944
Query: 402 TDNTTLEDVNLTCNEISVQG------GLDLVKAMKNKTKLKQINVS 441
+ N L +++L+ N++ G GL V + +L N++
Sbjct: 945 SSNCVLRELDLSNNDLQDSGVKLHSDGLKTVNSKLETLRLAMCNLT 990
Score = 90 (36.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 34/133 (25%), Positives = 65/133 (48%)
Query: 12 LEHVEMPQNGIYHVGITALSDAFEE-NKKLRHLNLNDNTITYKGAIPLGQAL-SKLPSLA 69
L +++ NG+ G+ LSD + + KL L+L +T + L AL S L
Sbjct: 834 LRELDLSNNGLQDSGVKLLSDGLKSPDFKLETLSLQGCNLTTQSFESLSSALQSSNCVLR 893
Query: 70 ILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQI 127
L+L + L+ + ++ L + N LE + L +++VQ L A+++ L+++
Sbjct: 894 ELDLSNNDLQHSAVKLLSDGLKSPNCKLETLRLQWCKLTVQSCESLSSALQSSNCVLREL 953
Query: 128 NVSENQFGEEGVE 140
++S N + GV+
Sbjct: 954 DLSNNDLQDSGVK 966
Score = 84 (34.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 37/139 (26%), Positives = 66/139 (47%)
Query: 323 LERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLA 380
L +++ N + G+ SD + N L L L +T + L AL S L
Sbjct: 950 LRELDLSNNDLQDSGVKLHSDGLKTVNSKLETLRLAMCNLTVQCCESLSSALQSSNYVLR 1009
Query: 381 ILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQI 438
L+L + L+ +G ++ L N LE + L+ ++ +G L A+ N + L+++
Sbjct: 1010 ELDLSNNDLQDSGVKKLSDGLKSLNCKLETLRLSGCMVTEEGCGFLSSALTSNPSHLREL 1069
Query: 439 NVSENQFGEEGVEEM-EKL 456
++S N G+ GV+ + EKL
Sbjct: 1070 DLSYNHPGDSGVKLLSEKL 1088
Score = 79 (32.9 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 323 LERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 381
L +++ N + G+ LSD + N L L L+ +T +G L AL+ PS +
Sbjct: 1008 LRELDLSNNDLQDSGVKKLSDGLKSLNCKLETLRLSGCMVTEEGCGFLSSALTSNPS-HL 1066
Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 422
L D G S + K L++ LED N T +++++ G
Sbjct: 1067 REL-DLSYNHPGDSGV-KLLSEK--LEDANYTLDKLNLDHG 1103
Score = 56 (24.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 50 ITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEIS 107
+T + L AL S L L+L + L+ +G ++ L + + LE + L +++
Sbjct: 699 LTTQSCESLSSALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKSPDCKLETLRLVMCKLT 758
Query: 108 VQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLMKS 148
V+ L A+++ L+++++S N + GV+ + +KS
Sbjct: 759 VRSCESLSSALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKS 800
>ZFIN|ZDB-GENE-081104-266 [details] [associations]
symbol:si:ch73-233m11.2 "si:ch73-233m11.2"
species:7955 "Danio rerio" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] InterPro:IPR027038 ZFIN:ZDB-GENE-081104-266
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00690000101889
PANTHER:PTHR24113 EMBL:CU457483 IPI:IPI01004731
Ensembl:ENSDART00000137413 Uniprot:F1QZJ8
Length = 880
Score = 125 (49.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 43/194 (22%), Positives = 90/194 (46%)
Query: 281 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 340
DC ++ L+V N LE++G L+ + K L+ + + + ++A
Sbjct: 585 DCEAMAEMLSGGSGLRVLDLCGNNLEDQGLVQLSGALENCK-LQEINLDHCSLTATSMSA 643
Query: 341 LSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 399
LS A + L LNL+ N + G + Q + K L IL + C L + SS+A
Sbjct: 644 LSSALNSDFSELNMLNLSRNAVMDDGMELISQVMRK-GRLKILRVFSCGLTDSCCSSLAA 702
Query: 400 YL-TDNTTLEDVNLTCNEISVQGGLDLVKAMK--NKT----KLKQINVSENQFGEEGVEE 452
+ +++ L +++L+ N++ G + + +A+ N T ++++ ++E FG G+
Sbjct: 703 AIQSEHCCLTELDLSVNDLGQSGAMQICEALMTPNCTLEILQMERCELTEEVFGALGMVL 762
Query: 453 MEKLMKSFGMAAAL 466
M + + ++ +
Sbjct: 763 MSGVSRLISLSVGV 776
Score = 97 (39.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 31/121 (25%), Positives = 62/121 (51%)
Query: 9 LKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSL 68
L+ + + + Q+ + IT LS A + + + L+ + + + + L AL+ L
Sbjct: 514 LRLSKRISLSQSRLSLAAITHLSAALADGQTIA-LDFSYSRLERESVKTLSHALTS-SKL 571
Query: 69 AILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQIN 128
+NL C L +A ++A+ L+ + L ++L N + QG + L A++N KL++IN
Sbjct: 572 QSINLSRCSLTAADCEAMAEMLSGGSGLRVLDLCGNNLEDQGLVQLSGALEN-CKLQEIN 630
Query: 129 V 129
+
Sbjct: 631 L 631
Score = 73 (30.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 33/133 (24%), Positives = 59/133 (44%)
Query: 323 LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAI 381
+ER E+ + +G+ +S L L++ N + GA + QAL K L
Sbjct: 745 MERCELTEEVFGALGMVLMSGV----SRLISLSVGVNDVGDGGAKHMWQALRHKSCKLHH 800
Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
L+L L A + + ++ L + L N+++ LVK M + ++ ++N+
Sbjct: 801 LDLEMLSLTDACVEELCDSVAASSYLSTLILKNNKMTDSSVPRLVKLMLDHPQMTELNLK 860
Query: 442 ENQFGEEGVEEME 454
N F E+ E ME
Sbjct: 861 YNDFSEDVFELME 873
Score = 41 (19.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 8/35 (22%), Positives = 20/35 (57%)
Query: 1 MLAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFE 35
+LAA F ++++ + + +Y+ + LSD+ +
Sbjct: 368 LLAASFYLDQSVQEISDKHSDLYYTFLAGLSDSIQ 402
>FB|FBgn0020257 [details] [associations]
symbol:ppa "partner of paired" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:AE013599 SUPFAM:SSF81383 GO:GO:0019005
GeneTree:ENSGT00700000104023 eggNOG:NOG69615 KO:K10280 OMA:LAMIFSY
EMBL:AF187980 EMBL:AY119098 RefSeq:NP_523812.1 UniGene:Dm.2705
SMR:Q9W214 IntAct:Q9W214 MINT:MINT-1600614 STRING:Q9W214
EnsemblMetazoa:FBtr0071924 GeneID:37602 KEGG:dme:Dmel_CG9952
UCSC:CG9952-RA CTD:37602 FlyBase:FBgn0020257 InParanoid:Q9W214
OrthoDB:EOG4KH19K ChiTaRS:ppa GenomeRNAi:37602 NextBio:804504
Uniprot:Q9W214
Length = 538
Score = 90 (36.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 29/91 (31%), Positives = 53/91 (58%)
Query: 351 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL-LKSAGASSIAKYLTDNTTLED 409
LR L+LN IT G + + +AL +L +L N+G C + G ++A+ LT+ T++
Sbjct: 451 LRSLSLNQCQITDHGMLKIAKALHELENL---NIGQCSRITDKGLQTLAEDLTNLKTIDL 507
Query: 410 VNLTCNEISVQGGLDLVKAMKNKTKLKQINV 440
C ++S +G +D++ MK KL+++N+
Sbjct: 508 YG--CTQLSSKG-IDII--MK-LPKLQKLNL 532
Score = 75 (31.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 2 LAAVFKKLKTLEHVEMPQNGIYHVGITALSDAFEENKKLRHLNL------NDNTITYKGA 55
L + + L+ LE +E+ G ++ T L KKL+HLNL +D I +
Sbjct: 279 LGRIAQHLRNLETLEL--GGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAG 336
Query: 56 IPLGQALSKLPSLAILNLGDCL-LKSAGASSIAKYLTDNTTLEDVNLT-CNEISVQGGLD 113
A L L L L DC L IA+ LT +L+ +NL+ C ++ G
Sbjct: 337 FSRETAEGNL-QLEYLGLQDCQRLSDEALGHIAQGLT---SLKSINLSFCVSVTDSG--- 389
Query: 114 LVKAMKNKTKLKQINV 129
+K + KL+Q+N+
Sbjct: 390 -LKHLARMPKLEQLNL 404
>UNIPROTKB|F1NNA4 [details] [associations]
symbol:FBXL7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005813
GO:GO:0000086 GO:GO:0007067 GO:GO:0008283 SUPFAM:SSF81383
GO:GO:0019005 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0031146 OMA:LMLETVI EMBL:AADN02007618
IPI:IPI00583555 Ensembl:ENSGALT00000021147 Uniprot:F1NNA4
Length = 376
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 47/164 (28%), Positives = 80/164 (48%)
Query: 297 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 356
V ++G RL + G +A +L+ LE +G Y++ A+ D NL HL++
Sbjct: 92 VIVSGCRRLTDRGLYTIAQCCPELRRLE-----VSGCYNISNEAVFDVVSLCPNLEHLDV 146
Query: 357 NDNTI--TYKGAIPLGQALSKLPSLAILNLGDC-LLKSAGASSIAKYLTDNTTLEDVNLT 413
+ I T + +I L K S+ L++ DC +L+ G +IA + T T L
Sbjct: 147 SVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHL--YLRR 204
Query: 414 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE-GVEEMEKL 456
C I+ +G L M T +K+++VS+ +F + G+ E+ KL
Sbjct: 205 CVRITDEG---LRYLMIYCTSIKELSVSDCRFVSDFGMREIAKL 245
>MGI|MGI:1890518 [details] [associations]
symbol:Nlrp4c "NLR family, pyrin domain containing 4C"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1890518
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
HOGENOM:HOG000294064 HOVERGEN:HBG063656 eggNOG:NOG150642
EMBL:AY596194 EMBL:AK166817 EMBL:AK166869 IPI:IPI00118121
RefSeq:NP_113566.2 UniGene:Mm.247765 ProteinModelPortal:Q3TKR3
SMR:Q3TKR3 PRIDE:Q3TKR3 Ensembl:ENSMUST00000037728
Ensembl:ENSMUST00000121583 GeneID:83564 KEGG:mmu:83564
UCSC:uc009fan.2 CTD:83564 InParanoid:Q3TKR3 OMA:NIKMYFR
OrthoDB:EOG4N04DB NextBio:350664 Bgee:Q3TKR3 CleanEx:MM_NLRP4C
Genevestigator:Q3TKR3 Uniprot:Q3TKR3
Length = 982
Score = 111 (44.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 43/153 (28%), Positives = 72/153 (47%)
Query: 303 NRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N L++EG K+L A+ L+ + + I G L++ +N+NLR+L +++N I
Sbjct: 813 NDLKDEGLKVLCGALSLPDSVLKSLSVRYCLITTSGCQDLAEVLRKNQNLRNLQVSNNKI 872
Query: 362 TYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 419
G L A+ K P+ + N+G C L A +A T TL +NL N +
Sbjct: 873 EDAGVKLLCDAI-KHPNCHLENIGLEACALTGACCEDLASAFTHCKTLWGINLQENALDH 931
Query: 420 QGGLDLVKAMKNKT-KLKQINVSENQFGEEGVE 451
G + L +A+K + L + + F +E E
Sbjct: 932 SGLIVLFEALKQQQCTLHVLGLRITDFDKETQE 964
Score = 105 (42.0 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 30 LSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIA 87
LS+ NK L HL+++ N + +G L ALS LP L L++ CL+ ++G +A
Sbjct: 795 LSEVLRRNKTLNHLDISSNDLKDEGLKVLCGALS-LPDSVLKSLSVRYCLITTSGCQDLA 853
Query: 88 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKN 120
+ L N L ++ ++ N+I G L A+K+
Sbjct: 854 EVLRKNQNLRNLQVSNNKIEDAGVKLLCDAIKH 886
Score = 61 (26.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 313 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH-LNLNDNTITYKGAIPLGQ 371
LA+ F KTL + + +N + H G+ L +A ++ + H L L + L
Sbjct: 909 LASAFTHCKTLWGINLQENALDHSGLIVLFEALKQQQCTLHVLGLRITDFDKETQELLMA 968
Query: 372 ALSKLPSLAILN 383
K P L+IL+
Sbjct: 969 EEEKNPHLSILS 980
Score = 58 (25.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNT 94
+N+ L+HL+LN +++ L LS+ ++ L + C L A L +
Sbjct: 688 QNQCLQHLDLNLTFLSHGDVKLLCDVLSQEECNIEKLMVAACNLSPDDCKVFASVLISSK 747
Query: 95 TLEDVNLTCNEISVQGGLDLVKAM 118
L+ +NL+ N + +G L KA+
Sbjct: 748 MLKHLNLSSNNLD-KGISSLSKAL 770
>TAIR|locus:2039027 [details] [associations]
symbol:AT2G20210 "AT2G20210" species:3702 "Arabidopsis
thaliana" [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002685 IPI:IPI00531808 RefSeq:NP_179611.2
UniGene:At.39728 ProteinModelPortal:F4IUG1 SMR:F4IUG1
EnsemblPlants:AT2G20210.1 GeneID:816540 KEGG:ath:AT2G20210
OMA:RWIRSEK Uniprot:F4IUG1
Length = 604
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 52/177 (29%), Positives = 82/177 (46%)
Query: 285 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 344
SS K L K+ + G N L+ A+ LA + LE +++ N I GI +L
Sbjct: 349 SSGKSLQSLC-KLNLRG-NELDRYDAENLAHALLHMPGLESLDLSGNPIEDSGIRSLISY 406
Query: 345 FEENKNLR--HLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 401
F +N + R LNL + ++ G I LS L L L++ D L S A ++
Sbjct: 407 FTKNPDSRLADLNLENCELSCCGVIEFLDTLSMLEKPLKFLSVADNALGSEVAEAVVNSF 466
Query: 402 TDNTTLEDVNLTCNEISVQGGLDLVKAM-KNKTKLKQINVSENQFGEEGVEEMEKLM 457
T ++E +N+ + G L L + + K KL IN+S+N+ G E + KL+
Sbjct: 467 T--ISIESLNIMGIGLGPLGFLALGRKLEKVSKKLLSINISKNRGGLETARFLSKLI 521
>RGD|1560291 [details] [associations]
symbol:RGD1560291 "similar to NACHT, leucine rich repeat and PYD
containing 4A" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] RGD:1560291 GO:GO:0005524 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 OrthoDB:EOG4N04DB IPI:IPI00391990
Ensembl:ENSRNOT00000029672 UCSC:RGD:1560291 Uniprot:D3ZE70
Length = 936
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 52/204 (25%), Positives = 89/204 (43%)
Query: 230 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 289
LD S I VE L D+L + C + C L + DC +
Sbjct: 694 LDFSFTCLSHINVELLCDVLNQAEC--------NVEKLVVEHCNL---SPDDCQNFAFVL 742
Query: 290 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 349
+ LK+ N L+ + A+ LE + + + LSDA +NK
Sbjct: 743 MNSKTLKILNLACNNLDKGIYSLCKALCHPNCILENLVLDNCSLSEQCWDYLSDALRQNK 802
Query: 350 NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL--GDCLLKSAGASSIAKYLTDNTTL 407
L HL++++N + KG L +AL+ LP+ + +L CL+ S+G +A+ L +N L
Sbjct: 803 ILCHLDISNNELKDKGLKILCKALT-LPNCVLKSLCMTHCLITSSGCQDLAEVLRNNQNL 861
Query: 408 EDVNLTCNEISVQGGLDLVKAMKN 431
+ + ++ N++ G L A+K+
Sbjct: 862 KGLQISNNKLEDAGVKLLCDAIKH 885
>RGD|1563529 [details] [associations]
symbol:Nlrp4 "NLR family, pyrin domain containing 4"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] RGD:1563529 GO:GO:0005524 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 OMA:NIKMYFR OrthoDB:EOG4N04DB
CTD:147945 IPI:IPI00366603 RefSeq:NP_001165635.1 UniGene:Rn.222403
ProteinModelPortal:D3ZP31 Ensembl:ENSRNOT00000046152 GeneID:499069
KEGG:rno:499069 NextBio:701729 Uniprot:D3ZP31
Length = 982
Score = 103 (41.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 341 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSIA 398
LS+ NK L HL+++ N + +G L AL+ LP +++L CL+ ++G +A
Sbjct: 795 LSEVVRRNKTLSHLDISSNDLKDEGLKVLCGALT-LPDSGLISLSVRHCLITTSGCQDLA 853
Query: 399 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
+ L N L + ++ N+I G L A+K
Sbjct: 854 EVLRHNQNLRSLQVSNNKIEDAGVKLLCDAIK 885
Score = 101 (40.6 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 44/157 (28%), Positives = 68/157 (43%)
Query: 303 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA-----LSDAFEENKNLRHLNLN 357
N L++EG K+L TL + + H IT L++ N+NLR L ++
Sbjct: 813 NDLKDEGLKVLCGAL----TLPDSGLISLSVRHCLITTSGCQDLAEVLRHNQNLRSLQVS 868
Query: 358 DNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
+N I G L A+ K P+ + N+G C L A +A TL +NL N
Sbjct: 869 NNKIEDAGVKLLCDAI-KQPNCHLENIGLEACELTGACCKDLASAFVHCKTLWGINLLEN 927
Query: 416 EISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVE 451
+ G + L +A+K K L + + F +E E
Sbjct: 928 ALDHSGLVVLFEALKQQKCTLHVLGLRITDFDKETQE 964
Score = 66 (28.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 36 ENKKLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNT 94
+N++L+HLNL+ +++ L L++ ++ L + C L A L +
Sbjct: 688 QNQRLQHLNLSLTFLSHSDVKLLCDVLNQAECNIEKLMIAACNLSPDDCKVFASVLISSK 747
Query: 95 TLEDVNLTCNEISVQGGLDLVKAM 118
L+ +NL+ N + +G L KA+
Sbjct: 748 MLKHLNLSSNNLD-KGISSLCKAL 770
>FB|FBgn0033212 [details] [associations]
symbol:CG1399 species:7227 "Drosophila melanogaster"
[GO:0017024 "myosin I binding" evidence=ISS] [GO:0042384 "cilium
assembly" evidence=ISM] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 GO:GO:0042384 eggNOG:NOG239526
HOGENOM:HOG000239124 GeneTree:ENSGT00390000014487
RefSeq:NP_610316.3 UniGene:Dm.12135 ProteinModelPortal:A1Z734
SMR:A1Z734 PaxDb:A1Z734 EnsemblMetazoa:FBtr0088939 GeneID:35715
KEGG:dme:Dmel_CG1399 UCSC:CG1399-RB FlyBase:FBgn0033212
InParanoid:A1Z734 OMA:TAIRNIF OrthoDB:EOG4MGQP6 PhylomeDB:A1Z734
GenomeRNAi:35715 NextBio:794875 Bgee:A1Z734 Uniprot:A1Z734
Length = 1452
Score = 90 (36.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 5 VFKKLKTLEHVEMPQNGIYHVGITALSDAF--EENKKLRHLNLNDNTITYKGAIPLGQAL 62
V K+ LE + + G+ + LS + N +R ++L+ N I KGAI L +
Sbjct: 268 VLKRSMWLEELHLEALGLRWDFLNKLSISVITNSNPAIRTIDLSHNIIEDKGAIHLAGPI 327
Query: 63 SKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 121
+K+ L L L C L S G + ++ LT N ++ + +LT ++S D + + N
Sbjct: 328 AKVSKGLCKLALAHCGLTSKGVNQMSHSLTLNQSISN-SLTYLDLSGNSLKDDITNLHNF 386
Query: 122 TKLKQINVSEN 132
L Q NV E+
Sbjct: 387 --LAQPNVLEH 395
Score = 83 (34.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 43/192 (22%), Positives = 84/192 (43%)
Query: 269 ITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 328
I GCKL +AL + S L + ++ N L +GA +L + ++ L+ +++
Sbjct: 457 IAGCKLPMEALKNLLLGLACNESTAGLYLDLSS-NTLGAQGAHVLESCIHGVRVLQSLDI 515
Query: 329 PQNGIYHVGITALSDAFEENKNLRHLNLNDNT--ITYKGAIPLGQALSKLPS-----LAI 381
N + + + A +N ++R L+L + + K P+ AL L L
Sbjct: 516 SDNNL-DAELAPVLTAISKNPSIRTLHLTRSLTGMKPKHIPPVMDALVNLIQKDDFPLVE 574
Query: 382 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
L L + LK L N +L+ ++++ N + G L KA++ +L+ I +
Sbjct: 575 LVLSENKLKH-DLHDFINALGSNQSLQKLDISGNFMGDVGARLLAKALQINNRLRTIYMD 633
Query: 442 ENQFGEEGVEEM 453
+N +G ++
Sbjct: 634 KNGVTLQGYADI 645
Score = 82 (33.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 303 NRLENEGAKMLAAVFKK--LKTLERVEMPQNGIYHVGITALSDAF-----EENKNLRHLN 355
N L+ E A +L A+ K ++TL + G+ I + DA +++ L L
Sbjct: 518 NNLDAELAPVLTAISKNPSIRTLH-LTRSLTGMKPKHIPPVMDALVNLIQKDDFPLVELV 576
Query: 356 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 415
L++N + + AL SL L++ + GA +AK L N L + + N
Sbjct: 577 LSENKLKHD-LHDFINALGSNQSLQKLDISGNFMGDVGARLLAKALQINNRLRTIYMDKN 635
Query: 416 EISVQGGLDLVKAMKNKTKLKQI 438
+++QG D+V A+++ ++ I
Sbjct: 636 GVTLQGYADIVYALEHNHSMRTI 658
>UNIPROTKB|A1XC24 [details] [associations]
symbol:TLR7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045416 "positive regulation of interleukin-8 biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045356
"positive regulation of interferon-alpha biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0035197 "siRNA binding" evidence=IEA] [GO:0034154 "toll-like
receptor 7 signaling pathway" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IEA]
[GO:0032722 "positive regulation of chemokine production"
evidence=IEA] [GO:0032009 "early phagosome" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006955 "immune response" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR026880 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 GO:GO:0006955
GO:GO:0005768 GO:GO:0003727 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032722 GO:GO:0032755
GO:GO:0005764 GO:GO:0051607 GO:GO:0032009 GO:GO:0003725
GO:GO:0032757 GO:GO:0071260 GO:GO:0035197 InterPro:IPR000372
SMART:SM00013 GO:GO:0045416 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0007252 SUPFAM:SSF52200
GO:GO:0034154 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0045356 eggNOG:NOG286662 HOVERGEN:HBG018601 OMA:AFYLSHQ
OrthoDB:EOG4BCDM5 PANTHER:PTHR24365:SF1 EMBL:DAAA02075466
EMBL:DAAA02075467 EMBL:DAAA02075468 EMBL:DAAA02075469 EMBL:DQ333225
EMBL:EF583900 IPI:IPI00713788 UniGene:Bt.111931 UniGene:Bt.91493
STRING:A1XC24 Ensembl:ENSBTAT00000029895 InParanoid:A1XC24
Uniprot:A1XC24
Length = 1050
Score = 96 (38.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 22 IYHVGITALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 81
+YH I LSDAF KKL+ L + ++ L L LP+L +L+LG +K A
Sbjct: 355 VYHAVIN-LSDAFSSLKKLKVLRIKGYVFKELNSLNLFP-LHNLPNLEVLDLGTNFIKIA 412
Query: 82 GASSIAKYLTDNTTLEDVNLTCNEISVQG 110
S ++ TL+ ++L+ N+IS G
Sbjct: 413 NLSIFNQF----KTLKFIDLSVNKISPSG 437
Score = 73 (30.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 289 EGSPLA-LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHV--GITALSDAF 345
E PL LK NRL+ + + F++L LE +++ N Y GIT + +
Sbjct: 538 EFQPLVELKYLDFSNNRLD----LLYSTAFEELHNLEVLDISSNSHYFQSEGITHMLNFT 593
Query: 346 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNL-GDCL--LKSAGASSIAKYLT 402
+ K LR L +N N I A + + SL IL G+ L L G + K+
Sbjct: 594 KNLKVLRKLMMNYNDI----ATSTSRTMES-ESLQILEFRGNHLDILWRDGDNRYLKFFK 648
Query: 403 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKL 456
+ LE+++++ N +S L + +M LK +++++N E ++ L
Sbjct: 649 NLLNLEELDISENSLSFLP-LGVFDSMP--PNLKTLSLAKNGLKSFSWERLQSL 699
>UNIPROTKB|P59047 [details] [associations]
symbol:NLRP5 "NACHT, LRR and PYD domains-containing protein
5" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0043487 "regulation
of RNA stability" evidence=IEA] [GO:0043623 "cellular protein
complex assembly" evidence=IEA] [GO:0045179 "apical cortex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0043234 GO:GO:0005730 GO:GO:0001701
GO:GO:0009566 GO:GO:0009887 GO:GO:0045179 GO:GO:0031647
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 GO:GO:0043623
GO:GO:0007566 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0043487
HOGENOM:HOG000294064 HOVERGEN:HBG063656 CTD:126206 eggNOG:NOG147585
OrthoDB:EOG44XJG0 EMBL:AY054986 EMBL:AY154460 EMBL:AC011470
EMBL:AC024580 IPI:IPI00168282 RefSeq:NP_703148.4 UniGene:Hs.356872
ProteinModelPortal:P59047 SMR:P59047 STRING:P59047
PhosphoSite:P59047 DMDM:215274029 PRIDE:P59047 DNASU:126206
Ensembl:ENST00000390649 GeneID:126206 KEGG:hsa:126206
UCSC:uc002qmi.3 GeneCards:GC19P056511 H-InvDB:HIX0040046
HGNC:HGNC:21269 MIM:609658 neXtProt:NX_P59047 PharmGKB:PA162397970
InParanoid:P59047 OMA:SQAMEQE PhylomeDB:P59047 GenomeRNAi:126206
NextBio:81718 Bgee:P59047 CleanEx:HS_NLRP5 Genevestigator:P59047
GermOnline:ENSG00000171487 Uniprot:P59047
Length = 1200
Score = 130 (50.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 280 HDCYESSKK--EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHV 336
H CY + SP + +AG N++ ++G L+ + + L+++ + GI
Sbjct: 880 HACYLKISQILTTSPSLKSLSLAG-NKVTDQGVMPLSDALRVSQCALQKLILEDCGITAT 938
Query: 337 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGA 394
G +L+ A N++L HL L++N++ +G L +++ +LP SL L L C L +AG
Sbjct: 939 GCQSLASALVSNRSLTHLCLSNNSLGNEGVNLLCRSM-RLPHCSLQRLMLNQCHLDTAGC 997
Query: 395 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
+A L N+ L ++L+ N + G L + M+
Sbjct: 998 GFLALALMGNSWLTHLSLSMNPVEDNGVKLLCEVMR 1033
Score = 38 (18.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 16/74 (21%), Positives = 26/74 (35%)
Query: 66 PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLK 125
P L L+LG +L ++ L T + N G L + + L+
Sbjct: 781 PHLRQLDLGSSILTERAMKTLCAKLRHPTCKIQTLMFRNAQITPGVQHLWRIVMANRNLR 840
Query: 126 QINVSENQFGEEGV 139
+N+ EE V
Sbjct: 841 SLNLGGTHLKEEDV 854
>UNIPROTKB|E1BL33 [details] [associations]
symbol:NLRP8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 OMA:DIFAKMN
EMBL:DAAA02047827 EMBL:DAAA02047828 IPI:IPI00710949
Ensembl:ENSBTAT00000054525 Uniprot:E1BL33
Length = 1022
Score = 113 (44.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 303 NRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 361
N L+++G K L + + L+R+ + + ++ A ++NK LR L+L N +
Sbjct: 880 NALQDDGVKQLWNILQHFPCPLQRLVLRNCALTSECCQDIASALDKNKTLRSLDLGANRL 939
Query: 362 TYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 420
G + L Q L S L +L L +C S ++ L N TL ++L+ N + +Q
Sbjct: 940 RDSGVVLLCQPLLNPDSGLQVLELEECQFTSICCPALTSVLLHNRTLRYLDLSGNGVGLQ 999
Query: 421 G 421
G
Sbjct: 1000 G 1000
Score = 54 (24.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 31 SDAFEENKKLRHLNLNDNTITYK-GAIPLGQALSKL--PSLAILNLGDCLLKSAGASSIA 87
S+ + + L+ N++ T+ + G++ G+ + P L L+L +C L S+A
Sbjct: 805 SNGADLTRSLKR-NIHLKTLMLRRGSLERGEECPPVLAPQLERLSLENCDLTPLSCESLA 863
Query: 88 KYLTDNTTLEDVNLTCNEISVQG 110
L N +L ++L N + G
Sbjct: 864 FSLVSNQSLTHLSLAENALQDDG 886
>DICTYBASE|DDB_G0286003 [details] [associations]
symbol:DDB_G0286003 "leucine-rich repeat-containing
protein (LRR)" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0286003 EMBL:AAFI02000083 eggNOG:NOG239526
RefSeq:XP_637947.1 ProteinModelPortal:Q54MF0 PRIDE:Q54MF0
EnsemblProtists:DDB0238632 GeneID:8625392 KEGG:ddi:DDB_G0286003
OMA:VELEFHL ProtClustDB:CLSZ2430147 Uniprot:Q54MF0
Length = 1070
Score = 100 (40.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 37/188 (19%), Positives = 85/188 (45%)
Query: 270 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 329
+GC + + +L D + S + + + ++ N L A +++ + LE +++
Sbjct: 438 SGCGMNADSLEDIFISFNRNRKIANISLNLS-HNALGAREATLMSKSISGCRYLEALDIS 496
Query: 330 QNGIYHVGITALSDAFE--ENKNLRHLNLNDNTITY--KGAI---PLGQALSKLPSLAIL 382
N + + L +A + + NL LN+ +N +G + L ++ P++ L
Sbjct: 497 NNRLNCRSLIELLNAIKNIDQFNLHELNIANNYFAQGPEGDLLCQQLAHLINTFPTIRTL 556
Query: 383 NL-GDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 441
N+ G S + + + L N +L++++++ N + + + ++ T L +N+
Sbjct: 557 NISGGKYPLSKSLTPLLESLVKNNSLKELDISDNGLGDSMASIIGEMLRENTSLIYLNLD 616
Query: 442 ENQFGEEG 449
NQFG G
Sbjct: 617 NNQFGLSG 624
Score = 67 (28.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 20 NGIYHVGI-TALSDAFEENKKLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDC 76
+G+ H I +A+ E NK + LNL+ N + PL L K PS I L+L
Sbjct: 237 SGLPHANIISAIGMCLETNKSITKLNLS-NLRVEQSLQPLANGLVKNPSNVIQALDLSKN 295
Query: 77 LLKSAGASSIAKYLTD-NTTLEDVNLT-CNEISVQGGLDLVKAMKN---KTKLKQINVSE 131
+ +++ + + + L +NL+ C+ + + +N +K +N+S
Sbjct: 296 NIPYPIMATLCECFSKFSHGLVSLNLSKCDLLPKTISILFESFERNFGMSLAIKYLNLSH 355
Query: 132 NQFGEEG 138
N+FG+ G
Sbjct: 356 NKFGDIG 362
>MGI|MGI:1345193 [details] [associations]
symbol:Nlrp5 "NLR family, pyrin domain containing 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005938 "cell cortex"
evidence=IDA] [GO:0007566 "embryo implantation" evidence=IMP]
[GO:0009566 "fertilization" evidence=IMP] [GO:0009887 "organ
morphogenesis" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043487 "regulation of RNA stability"
evidence=IMP] [GO:0043623 "cellular protein complex assembly"
evidence=IMP] [GO:0045179 "apical cortex" evidence=IDA]
MGI:MGI:1345193 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
GO:GO:0043234 GO:GO:0005730 GO:GO:0001701 GO:GO:0009566
GO:GO:0009887 GO:GO:0045179 GO:GO:0031647 GO:GO:0043623
GO:GO:0007566 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0043487
HOVERGEN:HBG063656 GeneTree:ENSGT00700000104427 CTD:126206
eggNOG:NOG147585 OrthoDB:EOG44XJG0 EMBL:AF074018 EMBL:AF143573
EMBL:AF143559 EMBL:AF143560 EMBL:AF143561 EMBL:AF143562
EMBL:AF143563 EMBL:AF143564 EMBL:AF143565 EMBL:AF143566
EMBL:AF143567 EMBL:AF143568 EMBL:AF143569 EMBL:AF143570
EMBL:AF143571 EMBL:AF143572 EMBL:AY196361 EMBL:AY196362
EMBL:AY329484 EMBL:AY329485 EMBL:AY329486 EMBL:AY329487
EMBL:AY329488 EMBL:AY329489 EMBL:AY329490 EMBL:AY329491
EMBL:BC053384 EMBL:AK135731 IPI:IPI00128823 IPI:IPI00720034
IPI:IPI00845527 IPI:IPI00845602 IPI:IPI00845607 IPI:IPI00845650
IPI:IPI00845699 IPI:IPI00845787 PIR:A59000 RefSeq:NP_001034232.1
RefSeq:NP_035990.1 UniGene:Mm.333653 ProteinModelPortal:Q9R1M5
SMR:Q9R1M5 IntAct:Q9R1M5 STRING:Q9R1M5 PhosphoSite:Q9R1M5
PRIDE:Q9R1M5 Ensembl:ENSMUST00000015866 Ensembl:ENSMUST00000086341
Ensembl:ENSMUST00000108441 Ensembl:ENSMUST00000133237
Ensembl:ENSMUST00000139661 GeneID:23968 KEGG:mmu:23968
UCSC:uc009foe.1 UCSC:uc009fof.1 UCSC:uc012fev.1 InParanoid:Q9R1M5
OMA:QEVWLLI NextBio:303841 Bgee:Q9R1M5 CleanEx:MM_NLRP5
Genevestigator:Q9R1M5 GermOnline:ENSMUSG00000015721 Uniprot:Q9R1M5
Length = 1163
Score = 110 (43.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 52/213 (24%), Positives = 87/213 (40%)
Query: 221 LKTGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 280
L + L L LS+N+ G GV+ L LR+ C + C ++
Sbjct: 910 LFSNQNLTHLCLSNNSLGTEGVQQLCQFLRNPEC--------ALQRLILNHCNIVD---- 957
Query: 281 DCYES-SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGI 338
D Y + + + L N + + K+L K+ L+ +E+ +
Sbjct: 958 DAYGFLAMRLANNTKLTHLSLTMNPVGDGAMKLLCEALKEPTCYLQELELVDCQLTQNCC 1017
Query: 339 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSI 397
L+ K+L+ L+L +N + KG I L + L + S L L LG C L S ++
Sbjct: 1018 EDLACMITTTKHLKSLDLGNNALGDKGVITLCEGLKQSSSSLRRLGLGACKLTSNCCEAL 1077
Query: 398 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 430
+ ++ N L +NL N+ S G L L A +
Sbjct: 1078 SLAISCNPHLNSLNLVKNDFSTSGMLKLCSAFQ 1110
Score = 57 (25.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 39 KLRHLNLNDNTITYKGA-IPLG-QALSKL----PSLAILNLGDCLLKSAGASSIAKYLTD 92
+LR+ + +T+K A + G + L KL +L LNLG+ +K + L
Sbjct: 767 ELRNQSCRIQKLTFKSAEVVSGLKHLWKLLFSNQNLKYLNLGNTPMKDDDMKLACEALKH 826
Query: 93 -NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFG 150
++E + L E+++ G + + + T+LK +++++N+ G + + + L S
Sbjct: 827 PKCSVETLRLDSCELTIIGYEMISTLLISTTRLKCLSLAKNRVGVKSMISLGNALSSSMC 886
Query: 151 MAAALVL 157
+ L+L
Sbjct: 887 LLQKLIL 893
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 472 397 0.00097 117 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 163
No. of states in DFA: 570 (61 KB)
Total size of DFA: 184 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.94u 0.08s 33.02t Elapsed: 00:00:11
Total cpu time: 33.03u 0.09s 33.12t Elapsed: 00:00:11
Start: Thu Aug 15 11:21:27 2013 End: Thu Aug 15 11:21:38 2013
WARNINGS ISSUED: 1