BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy3614
         (209 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|242015332|ref|XP_002428313.1| Enhancer of split mgamma protein, putative [Pediculus humanus
           corporis]
 gi|212512909|gb|EEB15575.1| Enhancer of split mgamma protein, putative [Pediculus humanus
           corporis]
          Length = 206

 Score =  282 bits (721), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 147/205 (71%), Positives = 164/205 (80%), Gaps = 10/205 (4%)

Query: 15  NTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEK 74
           + V+IE +QPISRTYQYRKVMKPMLERKRRARINRCLDELK+LMV ALQAEGENVSKLEK
Sbjct: 2   SAVEIEHIQPISRTYQYRKVMKPMLERKRRARINRCLDELKELMVAALQAEGENVSKLEK 61

Query: 75  ADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
           ADILELTV HL K+RRQQRLASNPVTDADRFRAGFT CA EVS+CLA+TPGID++LGTKL
Sbjct: 62  ADILELTVSHLHKLRRQQRLASNPVTDADRFRAGFTHCATEVSRCLAATPGIDIKLGTKL 121

Query: 135 MSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDT----YSMPLTPASSGSSQVDTCDYT 190
           M+HLG RLN+MDK SPLSVRV    TPP SP + T    Y MPLTPASS SS     DY+
Sbjct: 122 MTHLGHRLNDMDKTSPLSVRVGPAYTPPVSPVTSTEENSYLMPLTPASSASSHSPVLDYS 181

Query: 191 SQYKMYESMPSPK------SVWRPW 209
           S   + + +  P       S+WRPW
Sbjct: 182 SSSGLLKVVEMPAIMKPTDSMWRPW 206


>gi|91089129|ref|XP_972685.1| PREDICTED: similar to AGAP012342-PA [Tribolium castaneum]
 gi|270012431|gb|EFA08879.1| hypothetical protein TcasGA2_TC006580 [Tribolium castaneum]
          Length = 192

 Score =  269 bits (687), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 132/193 (68%), Positives = 155/193 (80%), Gaps = 2/193 (1%)

Query: 17  VDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKAD 76
           + +E+ QPISRTYQYRKVMKPMLERKRRARINRCLDELK+LMVTALQ+EGENVSKLEKAD
Sbjct: 2   LSVEEPQPISRTYQYRKVMKPMLERKRRARINRCLDELKELMVTALQSEGENVSKLEKAD 61

Query: 77  ILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           ILELTV+HL K+RRQQRL++NPV DADRFRAG+T CANEVS+CLAS P +D++LGTKLM+
Sbjct: 62  ILELTVRHLHKLRRQQRLSANPVVDADRFRAGYTHCANEVSRCLASIPHVDVQLGTKLMT 121

Query: 137 HLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMY 196
           HLG RLNEMDK++PL ++V    TPP SP    YSMPLTPASS +   +     S   + 
Sbjct: 122 HLGHRLNEMDKVAPLVIQV--AYTPPGSPAPTVYSMPLTPASSQAPSPNQPMDCSTAGLL 179

Query: 197 ESMPSPKSVWRPW 209
           +       VWRPW
Sbjct: 180 KVAHKTDDVWRPW 192


>gi|307185082|gb|EFN71281.1| Enhancer of split mgamma protein [Camponotus floridanus]
          Length = 207

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 131/196 (66%), Positives = 155/196 (79%), Gaps = 8/196 (4%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTAL  +GENV+KLEKADILEL
Sbjct: 13  QEQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALAGDGENVAKLEKADILEL 72

Query: 81  TVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           TV+HL K++RQQRL++NPV DADRFRAG+T CANEVS+CLA+TPG+D+ LGTKLM+HLG 
Sbjct: 73  TVRHLHKLQRQQRLSANPVIDADRFRAGYTHCANEVSRCLAATPGVDVALGTKLMTHLGH 132

Query: 141 RLNEMDKISPLSVRVMD-VCTPPPSPH--SDTYSMPLTPASSGSS----QVDTCDYTSQY 193
           +LN MDK  PL++ V     +P PS    SD YSMPLTPASS  S     +DT   + Q 
Sbjct: 133 KLNSMDKTGPLTIHVAAPQSSPTPSSELSSDEYSMPLTPASSQPSPVRTDIDTVSQSHQG 192

Query: 194 KMYESMPSPKSVWRPW 209
            +  + P+ + +WRPW
Sbjct: 193 LLQVAKPN-EPIWRPW 207


>gi|332017580|gb|EGI58280.1| Enhancer of split mgamma protein [Acromyrmex echinatior]
          Length = 207

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 131/200 (65%), Positives = 154/200 (77%), Gaps = 16/200 (8%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTAL  +GENV+KLEKADILEL
Sbjct: 13  QEQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALAGDGENVAKLEKADILEL 72

Query: 81  TVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           TV+HL K++RQQRL++NPV DADRFRAG+T CANEVS+CLA+TPG+D+ LGTKLM+HLG 
Sbjct: 73  TVRHLHKLQRQQRLSANPVIDADRFRAGYTHCANEVSRCLAATPGVDVALGTKLMTHLGH 132

Query: 141 RLNEMDKISPLSVRVMDVCTPP---PSPHS----DTYSMPLTPASSGSS----QVDTCDY 189
           +LN MDK  PL++ V    T P   PSP S    D Y MPLTPASS  S     +D    
Sbjct: 133 KLNSMDKTGPLTIHV----TAPQSSPSPTSELSADEYPMPLTPASSQPSPVRTDIDAVSQ 188

Query: 190 TSQYKMYESMPSPKSVWRPW 209
           + Q  +  + P+ + +WRPW
Sbjct: 189 SHQGLLQVAKPN-EPIWRPW 207


>gi|157104522|ref|XP_001648447.1| enhancer of split protein, putative [Aedes aegypti]
 gi|108880311|gb|EAT44536.1| AAEL004097-PA [Aedes aegypti]
          Length = 229

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 133/208 (63%), Positives = 155/208 (74%), Gaps = 20/208 (9%)

Query: 22  LQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELT 81
           L+P+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV+ALQ+EGENVSKLEKADILELT
Sbjct: 22  LEPLSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVSKLEKADILELT 81

Query: 82  VQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           V+HL K+RRQQRL  NPV DADRFRAGFT  ANEVS+CLAST G+D++LGTKLM+HLG R
Sbjct: 82  VRHLHKLRRQQRLTVNPVIDADRFRAGFTHAANEVSRCLASTQGVDIKLGTKLMTHLGHR 141

Query: 142 LNEMDKISPLSVRV-MDVCTPPPSPHS---------DTYSMPLTPAS---------SGSS 182
           LN++DK+SPLSV V  ++ +PP SP S          +Y MPLTP S         S S 
Sbjct: 142 LNDLDKVSPLSVHVEQNLQSPPISPFSTSSSTAADLQSYQMPLTPQSYRSGSGNSNSPSP 201

Query: 183 QVDTCDYT-SQYKMYESMPSPKSVWRPW 209
               C  T S  +    +   +SVWRPW
Sbjct: 202 NPSECSSTGSDQQTSGLLKIQESVWRPW 229


>gi|383852908|ref|XP_003701967.1| PREDICTED: enhancer of split mgamma protein-like [Megachile
           rotundata]
          Length = 207

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 157/211 (74%), Gaps = 12/211 (5%)

Query: 5   IHENQINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQA 64
           +HE Q+ M++      Q QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTAL  
Sbjct: 3   MHE-QMMMVDG-----QEQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALAG 56

Query: 65  EGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTP 124
           +GENV+KLEKADILELTV+HL K++RQQRL++NPV DADRFRAG+T CANEVS+CLA+TP
Sbjct: 57  DGENVAKLEKADILELTVRHLHKLQRQQRLSANPVIDADRFRAGYTHCANEVSRCLAATP 116

Query: 125 GIDLRLGTKLMSHLGQRLNEMDKISPLSVRV---MDVCTPPPSPHSDTYSMPLTPASSGS 181
           G+D+ LGTKLM+HLG +LN MDK  PL++ V       +      SD YSMPLTPASS  
Sbjct: 117 GVDVALGTKLMTHLGHKLNSMDKTGPLTIHVAAPQSSPSSGSELSSDEYSMPLTPASSQP 176

Query: 182 SQV--DTCDYTSQYKMYESMPSPKS-VWRPW 209
           S V  D    +  ++    +  P   +WRPW
Sbjct: 177 SPVRTDIEGISQSHQGLLQVAKPNEPIWRPW 207


>gi|312375673|gb|EFR22996.1| hypothetical protein AND_13855 [Anopheles darlingi]
          Length = 257

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/244 (54%), Positives = 163/244 (66%), Gaps = 47/244 (19%)

Query: 13  INNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKL 72
           I   +   QL+P+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV+ALQ+EGENV+KL
Sbjct: 14  IGTKLSPSQLEPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKL 73

Query: 73  EKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           EKADILELTV+HL K+RRQQRLA+NPV DADRFRAGFT  ANEVS+CLASTPG+D++LGT
Sbjct: 74  EKADILELTVRHLHKLRRQQRLAANPVIDADRFRAGFTHAANEVSRCLASTPGVDIKLGT 133

Query: 133 KLMSHLGQRLNEMDKISPLSVRV-------------------MDVCTPPPSPHSDT---- 169
           KLM+HLG RLN++DK+SPL+V++                   M   +  PSP   T    
Sbjct: 134 KLMTHLGHRLNDLDKVSPLTVQIGSSSSSSSSSSVDEPEDIQMPASSGSPSPCYSTGRSS 193

Query: 170 -----YSMPLTPASSGSSQ------------------VDTCDYTSQYKMYESMPSP-KSV 205
                YSMPLTP S  S +                   +  D+T+   + +   S  +SV
Sbjct: 194 PLMSGYSMPLTPQSYRSEESAMMMMGDSSSATPSPNPSECGDHTATEGLLKIQQSAGESV 253

Query: 206 WRPW 209
           WRPW
Sbjct: 254 WRPW 257


>gi|307212041|gb|EFN87924.1| Enhancer of split mgamma protein [Harpegnathos saltator]
          Length = 208

 Score =  248 bits (634), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 125/196 (63%), Positives = 148/196 (75%), Gaps = 7/196 (3%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q QPISRTYQYRKVMKPMLERKRRARINRCLDELK+LMVTAL  +GENV+KLEKADILEL
Sbjct: 13  QEQPISRTYQYRKVMKPMLERKRRARINRCLDELKELMVTALAGDGENVAKLEKADILEL 72

Query: 81  TVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           TV+HL K++RQQRL++NPV DADRFRAG+T CANEVS+CLA+TPG+D+ LGTKLM+HLG 
Sbjct: 73  TVRHLHKLQRQQRLSANPVIDADRFRAGYTHCANEVSRCLAATPGVDVALGTKLMTHLGH 132

Query: 141 RLNEMDKISPLSVRV---MDVCTPPPSPHSDTYSMPLTPASSGSSQVDT----CDYTSQY 193
           +LN MDK  PL++ V       +      SD Y+MPLTPASS  S V T        S  
Sbjct: 133 KLNSMDKTGPLTIHVAAPQSSPSSASELSSDEYAMPLTPASSQPSPVRTDIEAAVSQSHQ 192

Query: 194 KMYESMPSPKSVWRPW 209
            + +     + +WRPW
Sbjct: 193 GLLQVAKPNEPIWRPW 208


>gi|322800789|gb|EFZ21665.1| hypothetical protein SINV_01248 [Solenopsis invicta]
          Length = 206

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/199 (63%), Positives = 151/199 (75%), Gaps = 16/199 (8%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTAL  +GENV+KLEKADILEL
Sbjct: 13  QEQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALAGDGENVAKLEKADILEL 72

Query: 81  TVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           TV+HL K++RQQRL++NPV DADRFRAG+T CANEVS+CLA+TPG+D+ LGTKLM+HLG 
Sbjct: 73  TVRHLHKLQRQQRLSANPVIDADRFRAGYTHCANEVSRCLAATPGVDVALGTKLMTHLGH 132

Query: 141 RLNEMDKISPLSVRVMDVCTPPPSPH-------SDTYSMPLTPASSGSS----QVDTCDY 189
           +LN MDK  PL++ V    T P S         +D Y MPLTPASS  S     +D    
Sbjct: 133 KLNSMDKTGPLTIHV----TAPQSSPSPSSELSADEYPMPLTPASSQPSPVRTDIDAVSQ 188

Query: 190 TSQYKMYESMPSPKSVWRP 208
           + Q  +  + P+ + +WRP
Sbjct: 189 SHQGLLQVAKPN-EPIWRP 206


>gi|340724350|ref|XP_003400545.1| PREDICTED: enhancer of split mgamma protein-like [Bombus
           terrestris]
 gi|350397652|ref|XP_003484943.1| PREDICTED: enhancer of split mgamma protein-like [Bombus impatiens]
          Length = 207

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 158/211 (74%), Gaps = 12/211 (5%)

Query: 5   IHENQINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQA 64
           +HE QI M++      Q QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTAL  
Sbjct: 3   MHE-QIMMVDG-----QEQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALAG 56

Query: 65  EGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTP 124
           +GENV+KLEKADILELTV+HL K++RQQRL++NPV DADRFRAG+T CANEVS+CLA+TP
Sbjct: 57  DGENVAKLEKADILELTVRHLHKLQRQQRLSANPVIDADRFRAGYTHCANEVSRCLAATP 116

Query: 125 GIDLRLGTKLMSHLGQRLNEMDKISPLSVRV---MDVCTPPPSPHSDTYSMPLTPASSGS 181
           G+D+ LGTKLM+HLG +LN MDK  PL++ V       +      SD YSMPLTPASS  
Sbjct: 117 GVDVALGTKLMTHLGHKLNSMDKTGPLTIHVAAPQSSPSSSSELSSDEYSMPLTPASSQP 176

Query: 182 S--QVDTCDYTSQYKMYESMPSPKS-VWRPW 209
           S  ++D    +  ++    +  P   +WRPW
Sbjct: 177 SPVRIDIEGISQNHQGLLQVAKPNEPIWRPW 207


>gi|48130104|ref|XP_393312.1| PREDICTED: enhancer of split mgamma protein-like [Apis mellifera]
 gi|380027492|ref|XP_003697457.1| PREDICTED: enhancer of split mgamma protein-like [Apis florea]
          Length = 207

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/212 (62%), Positives = 159/212 (75%), Gaps = 14/212 (6%)

Query: 5   IHENQINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQA 64
           +HE QI M++      Q QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTAL  
Sbjct: 3   MHE-QIMMVDG-----QEQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALAG 56

Query: 65  EGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTP 124
           +GENV+KLEKADILELTV+HL K++RQQRL++NPV DADRFRAG+T CANEVS+CLA+TP
Sbjct: 57  DGENVAKLEKADILELTVRHLHKLQRQQRLSANPVIDADRFRAGYTHCANEVSRCLAATP 116

Query: 125 GIDLRLGTKLMSHLGQRLNEMDKISPLSVRV---MDVCTPPPSPHSDTYSMPLTPASSGS 181
           G+D+ LGTKLM+HLG +LN MDK  PL++ V       +      SD YSMPLTPASS  
Sbjct: 117 GVDVALGTKLMTHLGHKLNSMDKTGPLTIHVAAPQSSPSSSSELSSDEYSMPLTPASSQP 176

Query: 182 SQVDT----CDYTSQYKMYESMPSPKSVWRPW 209
           S V T       + Q  +  + P+ + +WRPW
Sbjct: 177 SPVRTDIEGISQSHQGLLQVAKPN-EPIWRPW 207


>gi|158300232|ref|XP_320210.4| AGAP012342-PA [Anopheles gambiae str. PEST]
 gi|157013059|gb|EAA00388.4| AGAP012342-PA [Anopheles gambiae str. PEST]
          Length = 197

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/134 (82%), Positives = 128/134 (95%)

Query: 22  LQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELT 81
           L+P+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV+ALQ+EGENV+KLEKADILELT
Sbjct: 5   LEPLSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELT 64

Query: 82  VQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           V+HL K+RRQQRLA+NPV DADRFRAGFT  ANEVS+CLASTPG+D++LGTKLM+HLG R
Sbjct: 65  VRHLHKLRRQQRLAANPVLDADRFRAGFTHAANEVSRCLASTPGVDIKLGTKLMTHLGHR 124

Query: 142 LNEMDKISPLSVRV 155
           LN++DK+SPLSV V
Sbjct: 125 LNDLDKVSPLSVHV 138


>gi|170033981|ref|XP_001844854.1| enhancer of split mgamma protein [Culex quinquefasciatus]
 gi|167875099|gb|EDS38482.1| enhancer of split mgamma protein [Culex quinquefasciatus]
          Length = 204

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 127/197 (64%), Positives = 146/197 (74%), Gaps = 12/197 (6%)

Query: 22  LQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELT 81
           L+P+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV+ALQ EGENVSKLEKADILELT
Sbjct: 11  LEPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQNEGENVSKLEKADILELT 70

Query: 82  VQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           V+HL K+RRQQRLA NPV DADRFRAGFT  ANEVS+CLAST G+D++LGTKLM+HLG R
Sbjct: 71  VRHLHKLRRQQRLAVNPVIDADRFRAGFTHAANEVSRCLASTSGVDIKLGTKLMTHLGHR 130

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPAS---------SGSSQVDTCDYTSQ 192
           LN++DK+SPLSV      +   +    +Y MPLTP S         S S     C  T  
Sbjct: 131 LNDLDKVSPLSVHSS---SSASAADLQSYQMPLTPQSFRSGSGNPNSPSPNPSECSSTGS 187

Query: 193 YKMYESMPSPKSVWRPW 209
                 +   +SVWRPW
Sbjct: 188 ESQQSLLKIQESVWRPW 204


>gi|251752776|dbj|BAH83643.1| enhancer of split mbeta [Bombyx mori]
          Length = 169

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/128 (78%), Positives = 116/128 (90%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV+ALQ+EGENV+KLEKADILELTV
Sbjct: 25  QPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTV 84

Query: 83  QHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           +HL K+RRQ+RL+ NP  D DRFRAGFT  ANEVS+CLAS PG+D+RLGT+LM+HLG RL
Sbjct: 85  RHLHKLRRQRRLSLNPTVDVDRFRAGFTHAANEVSRCLASIPGVDVRLGTQLMTHLGHRL 144

Query: 143 NEMDKISP 150
           NEM + + 
Sbjct: 145 NEMQRAAA 152


>gi|389610101|dbj|BAM18662.1| E(spl) region transcript mbeta [Papilio xuthus]
          Length = 199

 Score =  218 bits (556), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 113/192 (58%), Positives = 136/192 (70%), Gaps = 12/192 (6%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV+ALQ+EGENV+KLEKADILELTV
Sbjct: 15  QPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTV 74

Query: 83  QHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           +HL K+RRQ+RL+ N   DADRFRAGFT  ANEVS+CLAS PG+D+RLGT+LM+HLG RL
Sbjct: 75  RHLHKIRRQRRLSLNATVDADRFRAGFTHAANEVSRCLASIPGVDVRLGTQLMTHLGHRL 134

Query: 143 NEMDKISPLSV-----RVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYE 197
           N+M + +             + T   S    T S P +P    ++    C  +S  K   
Sbjct: 135 NDMQRAAGTDTPPASPPSPALSTVSSSSGYVTPSPPASPVPMHTAVPLDCTTSSNLKA-- 192

Query: 198 SMPSPKSVWRPW 209
                 +VWRPW
Sbjct: 193 -----PAVWRPW 199


>gi|283483973|ref|NP_001164466.1| enhancer of split mbeta [Bombyx mori]
 gi|281428763|gb|ADA69993.1| E(spl)-like protein [Bombyx mori]
          Length = 201

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/127 (78%), Positives = 116/127 (91%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV+ALQ+EGENV+KLEKADILELTV
Sbjct: 15  QPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTV 74

Query: 83  QHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           +HL K+RRQ+RL+ NP  D DRFRAGFT  ANEVS+CLAS PG+D+RLGT+LM+HLG RL
Sbjct: 75  RHLHKLRRQRRLSLNPTVDVDRFRAGFTHAANEVSRCLASIPGVDVRLGTQLMTHLGHRL 134

Query: 143 NEMDKIS 149
           NEM + +
Sbjct: 135 NEMQRAA 141


>gi|357615887|gb|EHJ69886.1| enhancer of split mbeta [Danaus plexippus]
          Length = 197

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 113/194 (58%), Positives = 138/194 (71%), Gaps = 18/194 (9%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV+ALQ+EGENV+KLEKADILELTV
Sbjct: 15  QPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTV 74

Query: 83  QHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
            HL K+RRQ+RL+ N   D DRFRAGFT  ANEVS+CLAS PG+D+RLGT+LM+HLG +L
Sbjct: 75  NHLHKLRRQRRLSLNSTVDTDRFRAGFTHAANEVSRCLASIPGVDVRLGTQLMTHLGHKL 134

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMP-- 200
           N++ + +              +P +   S  L+ ASS S  V      S   ++ ++P  
Sbjct: 135 NDIQRAANTD-----------TPPASPPSPALSTASSSSGYVTPSPPASPIPIHTAVPLD 183

Query: 201 -----SPKSVWRPW 209
                S  SVWRPW
Sbjct: 184 CTTNCSKTSVWRPW 197


>gi|328697370|ref|XP_001946911.2| PREDICTED: enhancer of split mgamma protein-like [Acyrthosiphon
           pisum]
          Length = 233

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 100/131 (76%), Positives = 116/131 (88%)

Query: 15  NTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEK 74
           ++V  E  QP+SRTYQYRKVMKPMLERKRRARINRCLDELK+LMV ALQ EGENVSKLEK
Sbjct: 2   SSVATEMQQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVVALQNEGENVSKLEK 61

Query: 75  ADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
           ADILELTV+HL K+RRQQRL+ NPVT+ DRFRAG+T CA+EVS+CLA+TPG+D+ LG  L
Sbjct: 62  ADILELTVRHLHKLRRQQRLSGNPVTEMDRFRAGYTRCASEVSRCLAATPGLDVTLGANL 121

Query: 135 MSHLGQRLNEM 145
           M+HLG RLN +
Sbjct: 122 MTHLGHRLNSI 132


>gi|332376220|gb|AEE63250.1| unknown [Dendroctonus ponderosae]
          Length = 201

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/187 (53%), Positives = 124/187 (66%), Gaps = 10/187 (5%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           +P+S+T QYRKVMKP+LERKRRARINRCLDELK+LM++AL  + ENV+KLEKADILE+TV
Sbjct: 25  KPMSKTMQYRKVMKPLLERKRRARINRCLDELKELMISALAMDEENVTKLEKADILEITV 84

Query: 83  QHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
            HLQK++RQ+ L S P  D DRFRAGFT CA EVS+ LASTPG+++ LGTKLM++LG +L
Sbjct: 85  AHLQKLKRQKSLFSTPSVDTDRFRAGFTNCAKEVSRVLASTPGVNIHLGTKLMTYLGHQL 144

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSP 202
           NE+D  +      + V   P S  SD          S        + T   K        
Sbjct: 145 NELDSFAATHPEPLMVGVGPSSDSSDEAYNLPMSPPSSRGSPSPINVTDTDK-------- 196

Query: 203 KSVWRPW 209
             VWRPW
Sbjct: 197 --VWRPW 201


>gi|195349603|ref|XP_002041332.1| GM10294 [Drosophila sechellia]
 gi|195574051|ref|XP_002105003.1| E(spl) region transcript mgamma [Drosophila simulans]
 gi|55715447|gb|AAV59238.1| enhancer of split complex mgamma protein [Drosophila simulans]
 gi|194123027|gb|EDW45070.1| GM10294 [Drosophila sechellia]
 gi|194200930|gb|EDX14506.1| E(spl) region transcript mgamma [Drosophila simulans]
          Length = 205

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/208 (51%), Positives = 139/208 (66%), Gaps = 26/208 (12%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMR--RQQRLASN--PVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           TV HLQKM+  RQ + AS    +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+
Sbjct: 65  TVTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVNLGTQLMT 124

Query: 137 HLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASSGSSQ---------- 183
           HLGQRLN+   I P    V+ V T P S H    D YS+P++P SS +            
Sbjct: 125 HLGQRLNQ---IQPAEKEVLPV-TAPLSVHIANRDAYSVPISPISSYAGSPNSNTSSTSH 180

Query: 184 --VDTCDYTSQYKMYESMPSPKSVWRPW 209
             + T D T   KM +     ++VWRPW
Sbjct: 181 SLLTTIDVT---KMEDDSEDEENVWRPW 205


>gi|24650222|ref|NP_524504.2| enhancer of split mgamma, helix-loop-helix [Drosophila
           melanogaster]
 gi|194908166|ref|XP_001981719.1| GG11450 [Drosophila erecta]
 gi|12643709|sp|Q01070.1|ESMC_DROME RecName: Full=Enhancer of split mgamma protein; Short=E(spl)mgamma;
           AltName: Full=Split locus enhancer protein mB
 gi|158495|gb|AAA28910.1| split locus enhancer protein mB [Drosophila melanogaster]
 gi|7228093|emb|CAB77021.1| HLHmgamma protein [Drosophila melanogaster]
 gi|7301419|gb|AAF56545.1| enhancer of split mgamma, helix-loop-helix [Drosophila
           melanogaster]
 gi|55715239|gb|AAV59046.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715252|gb|AAV59058.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715265|gb|AAV59070.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715278|gb|AAV59082.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715291|gb|AAV59094.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715304|gb|AAV59106.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715317|gb|AAV59118.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715330|gb|AAV59130.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715343|gb|AAV59142.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715356|gb|AAV59154.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715369|gb|AAV59166.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715382|gb|AAV59178.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715395|gb|AAV59190.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715408|gb|AAV59202.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715421|gb|AAV59214.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|55715434|gb|AAV59226.1| enhancer of split complex mgamma protein [Drosophila melanogaster]
 gi|66571110|gb|AAY51520.1| IP08862p [Drosophila melanogaster]
 gi|190656357|gb|EDV53589.1| GG11450 [Drosophila erecta]
 gi|220943418|gb|ACL84252.1| HLHmgamma-PA [synthetic construct]
 gi|220953348|gb|ACL89217.1| HLHmgamma-PA [synthetic construct]
          Length = 205

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/208 (51%), Positives = 139/208 (66%), Gaps = 26/208 (12%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMR--RQQRLASN--PVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           TV HLQKM+  RQ + AS    +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+
Sbjct: 65  TVTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMT 124

Query: 137 HLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASSGSSQ---------- 183
           HLGQRLN+   I P    V+ V T P S H    D YS+P++P SS +            
Sbjct: 125 HLGQRLNQ---IQPAEKEVLPV-TAPLSVHIANRDAYSVPISPISSYAGSPNSNTSSTSH 180

Query: 184 --VDTCDYTSQYKMYESMPSPKSVWRPW 209
             + T D T   KM +     ++VWRPW
Sbjct: 181 SLLTTIDVT---KMEDDSEDEENVWRPW 205


>gi|195454086|ref|XP_002074080.1| GK14455 [Drosophila willistoni]
 gi|194170165|gb|EDW85066.1| GK14455 [Drosophila willistoni]
          Length = 209

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/209 (49%), Positives = 143/209 (68%), Gaps = 24/209 (11%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMR--RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLM 135
           TV HLQKM+  RQ + A+   + ++ A+ FR+G+    NEVS+ L+  PG+++ LGT+LM
Sbjct: 65  TVTHLQKMKQQRQHKRANGEESTLSPAEGFRSGYIHAVNEVSRSLSQLPGVNVSLGTQLM 124

Query: 136 SHLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASS----------GSS 182
           +HLGQRLN++    P    V+ + T P S H    + YS+P++P SS           +S
Sbjct: 125 THLGQRLNQLQ---PAVKEVLPI-TAPLSVHIASREAYSVPISPISSYAGSPNSSVASAS 180

Query: 183 QVDTCDYTSQYKMYESMPS--PKSVWRPW 209
            + TC  +SQ    + M S   ++VWRPW
Sbjct: 181 LLTTCGSSSQISKIDEMDSEDEENVWRPW 209


>gi|8080|emb|CAA47434.1| helix-loop-helix protein [Drosophila melanogaster]
          Length = 205

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/208 (50%), Positives = 139/208 (66%), Gaps = 26/208 (12%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMR--RQQRLASN--PVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           TV HLQKM+  RQ + AS    +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+
Sbjct: 65  TVTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMT 124

Query: 137 HLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASSGSSQ---------- 183
           HLGQRLN+   I P    V+ V T P S H    D YS+P++P S+ +            
Sbjct: 125 HLGQRLNQ---IQPAEKEVLPV-TAPLSVHIANRDAYSVPISPISTYAGSPNSNTSSTSH 180

Query: 184 --VDTCDYTSQYKMYESMPSPKSVWRPW 209
             + T D T   KM +     ++VWRPW
Sbjct: 181 SLLTTIDVT---KMEDDSEDEENVWRPW 205


>gi|195504154|ref|XP_002098959.1| E(spl) region transcript mgamma [Drosophila yakuba]
 gi|55714899|gb|AAV59023.1| enhancer of split mgamma protein [Drosophila yakuba]
 gi|194185060|gb|EDW98671.1| E(spl) region transcript mgamma [Drosophila yakuba]
          Length = 205

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/208 (49%), Positives = 137/208 (65%), Gaps = 26/208 (12%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMRRQQRL----ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           TV HLQKM++Q++         +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+
Sbjct: 65  TVTHLQKMKQQRKHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMT 124

Query: 137 HLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASSGSSQ---------- 183
           HLGQRLN+   I P     + V T P S H    D YS+P++P SS +            
Sbjct: 125 HLGQRLNQ---IQPAEKEALPV-TAPLSVHIANRDAYSVPISPISSYAGSPNSNTSSTSH 180

Query: 184 --VDTCDYTSQYKMYESMPSPKSVWRPW 209
             + T D T   KM +     ++VWRPW
Sbjct: 181 SLLTTIDVT---KMEDDSEDEENVWRPW 205


>gi|321455743|gb|EFX66868.1| hypothetical protein DAPPUDRAFT_302410 [Daphnia pulex]
          Length = 221

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/220 (49%), Positives = 138/220 (62%), Gaps = 30/220 (13%)

Query: 16  TVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE-GE-NVSKLE 73
           T+D     PISRT QY+KV KP+LER+RRARINRCLDELKDLM  AL AE GE  ++KLE
Sbjct: 6   TLDFASETPISRTVQYKKVTKPLLERQRRARINRCLDELKDLMAGALAAEHGEAGMAKLE 65

Query: 74  KADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           KAD+LELTV+HL K+RR++RLA+NPV  +DRFRAGFT CA EVS  LA+ PG+D+ LGT+
Sbjct: 66  KADVLELTVRHLHKLRRERRLAANPVVASDRFRAGFTQCAREVSVALAAIPGVDVTLGTR 125

Query: 134 LMSHLGQRLNEMDKIS-----------PLSVRV---MDVCTPPPSPHS--DTYSM----- 172
           LM+HLG  LN +D  +           P ++     +   +PP SP S  D + +     
Sbjct: 126 LMTHLGHALNGLDAPTTTTPLLTSTPVPTAITTALPIRSYSPPDSPDSITDAHELQQQTM 185

Query: 173 ---PLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
              P +P SSG       D  +  +      S  SVWRPW
Sbjct: 186 CWRPESPLSSGYGS----DTNAMERPSSKTSSTSSVWRPW 221


>gi|195151963|ref|XP_002016908.1| GL21815 [Drosophila persimilis]
 gi|194111965|gb|EDW34008.1| GL21815 [Drosophila persimilis]
          Length = 214

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 139/214 (64%), Gaps = 29/214 (13%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QISEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKM--RRQQRLASN--PVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           TV HLQKM  +RQ + AS    ++ A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+
Sbjct: 65  TVTHLQKMKEKRQHKRASGDESLSPAEGFRSGYIHAVNEVSRSLSHLPGMNVSLGTQLMT 124

Query: 137 HLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASS-------------- 179
           HLGQRLN++      +V+     T P S H    D YS+P++P SS              
Sbjct: 125 HLGQRLNQLQP----AVKEALPITAPLSVHIASRDAYSVPISPVSSFAGSPNSSLASSER 180

Query: 180 --GSSQVDTCDYTSQYKMYESMPS--PKSVWRPW 209
              +S + TC      KM   + S   ++VWRPW
Sbjct: 181 LGSASLLTTCSSIDVTKMELEVDSEDEENVWRPW 214


>gi|125776118|ref|XP_001359174.1| GA20996 [Drosophila pseudoobscura pseudoobscura]
 gi|54638914|gb|EAL28316.1| GA20996 [Drosophila pseudoobscura pseudoobscura]
          Length = 214

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/214 (48%), Positives = 139/214 (64%), Gaps = 29/214 (13%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QISEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKM--RRQQRLASN--PVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           TV HLQKM  +RQ + A+    ++ A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+
Sbjct: 65  TVTHLQKMKEKRQHKRATGDESLSPAEGFRSGYIHAVNEVSRSLSHLPGMNVSLGTQLMT 124

Query: 137 HLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASS-------------- 179
           HLGQRLN++      +V+     T P S H    D YS+P++P SS              
Sbjct: 125 HLGQRLNQLQP----AVKEALPITAPLSVHIASRDAYSVPISPVSSFAGSPNSSLASSER 180

Query: 180 --GSSQVDTCDYTSQYKMYESMPS--PKSVWRPW 209
              +S + TC      KM   + S   ++VWRPW
Sbjct: 181 LGSASLLTTCSSIDVTKMELEVDSEDEENVWRPW 214


>gi|194743700|ref|XP_001954338.1| GF16796 [Drosophila ananassae]
 gi|190627375|gb|EDV42899.1| GF16796 [Drosophila ananassae]
          Length = 205

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/201 (50%), Positives = 132/201 (65%), Gaps = 24/201 (11%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           +TYQYRK+MKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILELTV HLQ
Sbjct: 11  KTYQYRKLMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQ 70

Query: 87  KMR--RQQRLASN--PVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           KM+  RQ + AS    +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+HLGQRL
Sbjct: 71  KMKQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMTHLGQRL 130

Query: 143 NEMDKISPLSVRVMDVCTPPPS--PHSDTYSMPLTPASSGSSQ------------VDTCD 188
           N+   I P    V+ V  P        D YS+P++P SS +              + T D
Sbjct: 131 NQ---IQPAVKEVLPVTAPLSVQIASRDAYSVPISPVSSFAGSPNSNASSASTSLLTTID 187

Query: 189 YTSQYKMYESMPSPKSVWRPW 209
            T   KM +     ++VWRPW
Sbjct: 188 VT---KMEDDSEDEENVWRPW 205


>gi|195389616|ref|XP_002053472.1| GJ23903 [Drosophila virilis]
 gi|194151558|gb|EDW66992.1| GJ23903 [Drosophila virilis]
          Length = 217

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 142/218 (65%), Gaps = 34/218 (15%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QISEMSKTYQYRKVMKPLLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMRRQQRL-----ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLM 135
           TV HLQKM++Q++       +  +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM
Sbjct: 65  TVTHLQKMKQQRQHKRANGGAETLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLM 124

Query: 136 SHLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASS------------- 179
           +HLGQRLN++    P    V+ V T P S H    D YS+P++P SS             
Sbjct: 125 THLGQRLNQLQ---PAVKEVLPV-TQPLSVHIASRDAYSVPISPISSYAGSPNSSVASEQ 180

Query: 180 --GSSQVDTC------DYTSQYKMYESMPSPKSVWRPW 209
              +S + TC      D T   ++ +S    ++VWRPW
Sbjct: 181 LGSASLLTTCSSNLSIDVTKMEEVADS-EDEENVWRPW 217


>gi|195110327|ref|XP_001999733.1| GI24686 [Drosophila mojavensis]
 gi|193916327|gb|EDW15194.1| GI24686 [Drosophila mojavensis]
          Length = 217

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/217 (47%), Positives = 138/217 (63%), Gaps = 32/217 (14%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QISEMSKTYQYRKVMKPLLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMRRQQRL-----ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLM 135
           TV HLQKM++Q++       +  +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM
Sbjct: 65  TVTHLQKMKQQRQHKRANGGAETLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTELM 124

Query: 136 SHLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASS------------- 179
           +HLGQRLN++    P    V+ V T P S H    D YS+P++P SS             
Sbjct: 125 THLGQRLNQLQ---PAVKEVLPV-TAPLSVHIASRDAYSVPISPISSYAGSPNSSVASER 180

Query: 180 --GSSQVDTCDYTSQYKMYESMPSPKS-----VWRPW 209
              +S + TC       + +    P S     VWRPW
Sbjct: 181 TGSASLLTTCSSNLSINVTKMDEGPDSEDEENVWRPW 217


>gi|359952817|gb|AEV91199.1| enhancer of split region protein HLHmg [Teleopsis dalmanni]
          Length = 216

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/218 (45%), Positives = 140/218 (64%), Gaps = 35/218 (16%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QISEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMRRQQRLAS----NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           TV HLQK+R+Q++ A+      ++ A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+
Sbjct: 65  TVTHLQKLRQQRKQAAAKGNTTMSQAEGFRSGYIHAVNEVSRSLSELPGVNVNLGTQLMT 124

Query: 137 HLGQRLNEMDK--------ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASS--GS--SQV 184
           HLGQRLN++           SPLSV + +V           YS+P++P SS  GS  S +
Sbjct: 125 HLGQRLNQLQPAVKPPVPVTSPLSVHIGNVN------FRGHYSVPISPISSYTGSPNSSI 178

Query: 185 DTCDYT-------------SQYKMYESMPSPKSVWRPW 209
            +  +T             +   +   +    +VWRPW
Sbjct: 179 SSEKHTPLLVTCPNSPIDVTTVDINIDVEEEDNVWRPW 216


>gi|194743698|ref|XP_001954337.1| GF18225 [Drosophila ananassae]
 gi|190627374|gb|EDV42898.1| GF18225 [Drosophila ananassae]
          Length = 200

 Score =  179 bits (453), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 95/196 (48%), Positives = 126/196 (64%), Gaps = 17/196 (8%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRLASNPVTD-----------ADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           ++K+R Q++L  + V++           A+ FRAG+   ANEVSK LA+ PG+ + LGT+
Sbjct: 67  MKKLRAQKQLRLSSVSNSTQVSDPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQ 126

Query: 134 LMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQY 193
           LMSHLG RLN +  + P     + V  P  +P     + P  P+  GS +  TC      
Sbjct: 127 LMSHLGHRLNYLQVVVPSLPIGVGVGVPMQAPEEAMVTPP--PSECGSLESGTCSPAPSE 184

Query: 194 KMYESMPSPKSVWRPW 209
               S P    +WRPW
Sbjct: 185 ASSTSGP----MWRPW 196


>gi|375313022|gb|AFA51416.1| hairy enhancer of split-like 2, partial [Daphnia magna]
          Length = 196

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/164 (57%), Positives = 117/164 (71%), Gaps = 11/164 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE-GE-NVSKLEKADILELTVQH 84
           RT QY+KV KP+LER+RRARINRCLDELKDLM  AL AE GE  ++KLEKAD+LELTV+H
Sbjct: 1   RTVQYKKVTKPLLERQRRARINRCLDELKDLMAGALAAEHGEAGMAKLEKADVLELTVRH 60

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L K+RR++RLA+NPV  +DRFRAGFT CA EVS  LA+ PG+D+ LGT+LM+HLG  LN 
Sbjct: 61  LHKLRRERRLAANPVVASDRFRAGFTQCAREVSVALAAIPGVDVSLGTRLMTHLGHALNG 120

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCD 188
           +D  +P         TP  S   +T ++P+   S   S V   D
Sbjct: 121 LDAPTP---------TPLASSTPNTTALPVRSYSPPDSPVSITD 155


>gi|8076|emb|CAA47432.1| E(Spl) HLH-Mbeta [Drosophila melanogaster]
 gi|55715240|gb|AAV59047.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715253|gb|AAV59059.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715266|gb|AAV59071.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715279|gb|AAV59083.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715292|gb|AAV59095.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715305|gb|AAV59107.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715318|gb|AAV59119.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715331|gb|AAV59131.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715344|gb|AAV59143.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715357|gb|AAV59155.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715370|gb|AAV59167.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715383|gb|AAV59179.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715396|gb|AAV59191.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715409|gb|AAV59203.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715422|gb|AAV59215.1| enhancer of split mbeta protein [Drosophila melanogaster]
 gi|55715435|gb|AAV59227.1| enhancer of split mbeta protein [Drosophila melanogaster]
          Length = 195

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/197 (47%), Positives = 124/197 (62%), Gaps = 20/197 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRLASNPVTD------------ADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K+R Q++L  + VT             A+ FRAG+   ANEVSK LA+ PG+ + LGT
Sbjct: 67  MKKLRAQKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGT 126

Query: 133 KLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
           +LMSHLG RLN +  + P     + +  P  +P  D   +   P+  GS +   C     
Sbjct: 127 QLMSHLGHRLNYLQVVVP----SLPIGVPLQAPVEDQAMVTPPPSECGSLESGACSPAPS 182

Query: 193 YKMYESMPSPKSVWRPW 209
                S P    +WRPW
Sbjct: 183 EASSTSGP----MWRPW 195


>gi|195504152|ref|XP_002098958.1| E(spl) region transcript mbeta [Drosophila yakuba]
 gi|55714918|gb|AAV59024.1| enhancer of split mbeta protein [Drosophila yakuba]
 gi|194185059|gb|EDW98670.1| E(spl) region transcript mbeta [Drosophila yakuba]
          Length = 195

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/197 (47%), Positives = 127/197 (64%), Gaps = 20/197 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRL-----------ASNP-VTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K+R Q++L           +++P V+ A+ FRAG+   ANEVSK LA+ PG+ + LGT
Sbjct: 67  MKKLRAQKQLRLSSVSGTVSPSADPKVSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGT 126

Query: 133 KLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
           +LMSHLG RLN +  + P     + +  P  +P  D   +   P+  GS +   C     
Sbjct: 127 QLMSHLGHRLNYLQVVVP----SLPIGVPLQAPVEDQAMVTPPPSECGSLESGACSPAPS 182

Query: 193 YKMYESMPSPKSVWRPW 209
                S P    +WRPW
Sbjct: 183 EASSTSGP----MWRPW 195


>gi|195349605|ref|XP_002041333.1| GM10206 [Drosophila sechellia]
 gi|194123028|gb|EDW45071.1| GM10206 [Drosophila sechellia]
          Length = 195

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 94/197 (47%), Positives = 124/197 (62%), Gaps = 20/197 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRL-------ASNPVTD-----ADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K+R Q++L         +P  D     A+ FRAG+   ANEVSK LA+ PG+ + LGT
Sbjct: 67  MKKLRAQKQLRLTSVSGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGT 126

Query: 133 KLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
           +LMSHLG RLN +  + P     + +  P  +P  D   +   P+  GS +   C     
Sbjct: 127 QLMSHLGHRLNYLQVVVP----SLPIGVPLQAPLEDQAMVTPPPSECGSLESGACSPAPS 182

Query: 193 YKMYESMPSPKSVWRPW 209
                S P    +WRPW
Sbjct: 183 EASSTSGP----MWRPW 195


>gi|91089123|ref|XP_972493.1| PREDICTED: similar to enhancer of split protein, putative
           [Tribolium castaneum]
 gi|270011512|gb|EFA07960.1| hypothetical protein TcasGA2_TC005541 [Tribolium castaneum]
          Length = 154

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 92/145 (63%), Positives = 107/145 (73%), Gaps = 9/145 (6%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           +PISRTYQYRKVMKPMLERKRRARINRCLDELK+LMVTALQ+EGENVSKLEKADILELTV
Sbjct: 9   EPISRTYQYRKVMKPMLERKRRARINRCLDELKELMVTALQSEGENVSKLEKADILELTV 68

Query: 83  QHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLAS-TPGIDLRLGTKLMSHLGQR 141
           +HL  ++RQ +L   P   ADRFRAGFT CA EVS+ L + T  +D   G KL+ HLG  
Sbjct: 69  RHLHGLKRQHQLVIPPEGYADRFRAGFTQCAQEVSQFLTTPTETVDAVAGRKLLQHLGAC 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPH 166
           + +++           V TPP SP 
Sbjct: 129 VRQLE--------CAQVYTPPASPQ 145


>gi|194908161|ref|XP_001981718.1| GG12207 [Drosophila erecta]
 gi|195574053|ref|XP_002105004.1| E(spl) region transcript mbeta [Drosophila simulans]
 gi|55715448|gb|AAV59239.1| enhancer of split mbeta protein [Drosophila simulans]
 gi|55715460|gb|AAV59250.1| enhancer of split mbeta protein [Drosophila simulans]
 gi|190656356|gb|EDV53588.1| GG12207 [Drosophila erecta]
 gi|194200931|gb|EDX14507.1| E(spl) region transcript mbeta [Drosophila simulans]
          Length = 195

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/197 (47%), Positives = 124/197 (62%), Gaps = 20/197 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRL------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K+R Q++L            A   ++ A+ FRAG+   ANEVSK LA+ PG+ + LGT
Sbjct: 67  MKKLRAQKQLRLSSVSGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGT 126

Query: 133 KLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
           +LMSHLG RLN +  + P     + +  P  +P  D   +   P+  GS +   C     
Sbjct: 127 QLMSHLGHRLNYLQVVVP----SLPIGVPLQAPVEDQAMVTPPPSECGSLESGACSPAPS 182

Query: 193 YKMYESMPSPKSVWRPW 209
                S P    +WRPW
Sbjct: 183 EASSTSGP----MWRPW 195


>gi|24650224|ref|NP_524505.2| enhancer of split mbeta, helix-loop-helix [Drosophila melanogaster]
 gi|12643708|sp|Q01069.2|ESMB_DROME RecName: Full=Enhancer of split mbeta protein; Short=E(spl)mbeta;
           AltName: Full=HLH-mbeta; AltName: Full=Split locus
           enhancer protein mA
 gi|7301420|gb|AAF56546.1| enhancer of split mbeta, helix-loop-helix [Drosophila melanogaster]
 gi|21429810|gb|AAM50583.1| GH01842p [Drosophila melanogaster]
 gi|220942216|gb|ACL83651.1| HLHmbeta-PA [synthetic construct]
 gi|220952428|gb|ACL88757.1| HLHmbeta-PA [synthetic construct]
          Length = 195

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/206 (47%), Positives = 125/206 (60%), Gaps = 38/206 (18%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRLASNPVTD------------ADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K+R Q++L  + VT             A+ FRAG+   ANEVSK LA+ PG+ + LGT
Sbjct: 67  MKKLRAQKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGT 126

Query: 133 KLMSHLGQRLNEMDKI-------SPLSVRVMD--VCTPPPSPHSDTYSMPLTPASSGSSQ 183
           +LMSHLG RLN +  +        PL   V D  + TPPPS      S   +PA S +S 
Sbjct: 127 QLMSHLGHRLNYLQVVVPSLPIGVPLQAPVEDQAMVTPPPSECDSLESGACSPAPSEASS 186

Query: 184 VDTCDYTSQYKMYESMPSPKSVWRPW 209
                                +WRPW
Sbjct: 187 TS-----------------GPMWRPW 195


>gi|195038335|ref|XP_001990615.1| GH19452 [Drosophila grimshawi]
 gi|193894811|gb|EDV93677.1| GH19452 [Drosophila grimshawi]
          Length = 217

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 133/211 (63%), Gaps = 32/211 (15%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           +TYQYRKVMKP+LERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILELTV HLQ
Sbjct: 11  KTYQYRKVMKPLLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQ 70

Query: 87  KMR--RQQRLASNP---VTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           KM+  RQ + A+     +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM+HLGQR
Sbjct: 71  KMKQQRQHKRANGSDETLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMTHLGQR 130

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASS---------------GSSQ 183
           LN++      +V+ +   T P S H      YS+P++P SS                +S 
Sbjct: 131 LNQLQP----AVKELLPVTAPLSVHIANRGGYSVPISPVSSFAGSPNSSVASEQLGSASL 186

Query: 184 VDTCDYTSQYKMYE-----SMPSPKSVWRPW 209
           + TC       + +          ++VWRPW
Sbjct: 187 LTTCSSNLSIDVIKMEEAADSEDEENVWRPW 217


>gi|125776134|ref|XP_001359178.1| GA13073 [Drosophila pseudoobscura pseudoobscura]
 gi|195151959|ref|XP_002016906.1| GL22021 [Drosophila persimilis]
 gi|54638920|gb|EAL28322.1| GA13073 [Drosophila pseudoobscura pseudoobscura]
 gi|194111963|gb|EDW34006.1| GL22021 [Drosophila persimilis]
          Length = 200

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/198 (48%), Positives = 125/198 (63%), Gaps = 17/198 (8%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRL------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K+R Q++L            A + ++ A+ FRAG+   ANEVSK LA+ PG+ + LGT
Sbjct: 67  MKKLRAQKQLRLSSSVSPSASSADSKLSIAESFRAGYVHAANEVSKTLAAVPGVTVDLGT 126

Query: 133 KLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASS-GSSQVDTCDYTS 191
           +LMSHLG RLN +  + P     M V    P    D  ++   P S  GS +  TC    
Sbjct: 127 QLMSHLGHRLNYLQVVVPTLPIGMGVPLQTPVSGVDDAALVTPPPSECGSLESGTCSPAP 186

Query: 192 QYKMYESMPSPKSVWRPW 209
                 S P    +WRPW
Sbjct: 187 SEASSTSGP----MWRPW 200


>gi|375313024|gb|AFA51417.1| hairy enhancer of split-like 3, partial [Daphnia magna]
          Length = 185

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 117/154 (75%), Gaps = 6/154 (3%)

Query: 18  DIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
           ++E+ QPI RTYQYRKVMKPMLERKRRARINRCLDELK+LM +AL +EGEN++KLEKAD+
Sbjct: 5   NVEEEQPIPRTYQYRKVMKPMLERKRRARINRCLDELKELMSSALASEGENLTKLEKADV 64

Query: 78  LELTVQHLQKMRRQQRLA-----SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           LELTV+HL K+R +Q L      S+P +  D+FRAGFT CA EVS+ LA++ G+D+ +G 
Sbjct: 65  LELTVRHLHKLRERQALGLSPSPSSPASTQDKFRAGFTHCAAEVSRYLATSTGLDVTVGQ 124

Query: 133 KLMSHLGQRLNEMDKISPLSVRVMDVC-TPPPSP 165
           +L+SHLG+ +++++        +     TPP SP
Sbjct: 125 RLLSHLGRCVHQLEAFPASGATIPSASYTPPSSP 158


>gi|321455725|gb|EFX66850.1| enhancer of split mgamma protein-like protein [Daphnia pulex]
          Length = 239

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 138/234 (58%), Gaps = 44/234 (18%)

Query: 18  DIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
           ++E+ QPISRTYQYRKVMKPMLERKRRARINRCLDELK+LM +AL +EGEN++KLEKAD+
Sbjct: 8   NVEEEQPISRTYQYRKVMKPMLERKRRARINRCLDELKELMSSALASEGENLTKLEKADV 67

Query: 78  LELTVQHLQKMRRQQRLA----------SNPVTDADRFRAGFTTCANEVSKCLASTPGID 127
           LELTV+HL K+R +Q L            N     D+FRAGFT CA EVS+ LA++ G+D
Sbjct: 68  LELTVRHLHKLRERQALGLSPSPSSPGSPNSNNSQDKFRAGFTHCAAEVSRYLATSTGLD 127

Query: 128 LRLGTKLMSHLGQRLNEMDKISPLSV------------------------RVMDVCTPPP 163
           + +G +L+SHLG+ +++++                               R+      PP
Sbjct: 128 VTVGQRLLSHLGRCVHQLETFPASGAAIPSASYTPPSSPTQQQQQQSELHRIHRSSVLPP 187

Query: 164 SPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKS--------VWRPW 209
            P S   S  +  +++ ++    CDY S+Y +   + SP +        VWRPW
Sbjct: 188 LPVSPALS-DVMDSTTSTTMTGPCDY-SKYSIRSDLYSPSAVMANVSEKVWRPW 239


>gi|158493|gb|AAA28909.1| split locus enhancer protein mA [Drosophila melanogaster]
          Length = 195

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/206 (47%), Positives = 125/206 (60%), Gaps = 38/206 (18%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRLASNPVTD------------ADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K+R Q++L  + VT             A+ FRAG+   ANEVSK LA+ PG+ + LGT
Sbjct: 67  MKKLRAQKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGT 126

Query: 133 KLMSHLGQRLNEMDKI-------SPLSVRVMD--VCTPPPSPHSDTYSMPLTPASSGSSQ 183
           +LMSHLG RLN +  +        PL   V D  + TPPPS      S   +PA S +S 
Sbjct: 127 QLMSHLGHRLNYLQVVVPSLPIGVPLQAPVEDQAMVTPPPSECDTLESGRCSPAPSEASS 186

Query: 184 VDTCDYTSQYKMYESMPSPKSVWRPW 209
                                +WRPW
Sbjct: 187 TS-----------------GPMWRPW 195


>gi|193671741|ref|XP_001949114.1| PREDICTED: enhancer of split mgamma protein-like [Acyrthosiphon
           pisum]
          Length = 213

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/195 (53%), Positives = 120/195 (61%), Gaps = 28/195 (14%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP+SRTYQYRKVMKP+LERKRRARINRCLDELKDLMV  LQAEGENVSKLEKADILELTV
Sbjct: 39  QPVSRTYQYRKVMKPLLERKRRARINRCLDELKDLMVVTLQAEGENVSKLEKADILELTV 98

Query: 83  QHLQKMRRQQRLASNPVTD--ADRFRAGFTTCANEVSKCLAS---TPGIDLRLGTKLMSH 137
           +HL K++R   L    V    AD+FRAGF  CA EVS  L S   +P +D   G KL+ H
Sbjct: 99  RHLHKLKRHNALGLTGVDSVYADKFRAGFAHCATEVSNYLTSDVRSPPVDPSAGVKLLHH 158

Query: 138 LGQRLNEMDKIS--PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKM 195
           LG  + ++D  S  P S  V    T      +D Y  P TP S+  S++           
Sbjct: 159 LGACMRKIDVDSNRPASGPVATAATT-----ADQYR-PYTPPSTPGSELKE--------- 203

Query: 196 YESMPSPKSV-WRPW 209
                 P SV WRPW
Sbjct: 204 -----DPNSVCWRPW 213


>gi|7228084|emb|CAB77019.1| HLHmgamma protein [Drosophila hydei]
          Length = 217

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 32/217 (14%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           Q+  +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLMV  L++EGE+V++LEKADILEL
Sbjct: 5   QVSEMSKTYQYRKVMKPLLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILEL 64

Query: 81  TVQHLQKMRRQQRL-----ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLM 135
           TV HLQKM++Q++       +  +T A+ FR+G+    NEVS+ L+  PG+++ LGT+LM
Sbjct: 65  TVTHLQKMKQQRQQKRANGGAETLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTELM 124

Query: 136 SHLGQRLNEMDKISPLSVRVMDVCTPPPSPH---SDTYSMPLTPASS------------- 179
           +HLGQRLN++    P    V+ V T P S H    D YS+P++P SS             
Sbjct: 125 THLGQRLNQLQ---PAVKEVLPV-TAPLSVHIASRDAYSVPISPVSSYAGSPNSSVASEQ 180

Query: 180 --GSSQVDTC--DYTSQYKMYESMPSP---KSVWRPW 209
              +S + TC  + +      E +P     ++VWRPW
Sbjct: 181 TGSASLLTTCSSNLSINVTKMEEVPDSEDEENVWRPW 217


>gi|242015334|ref|XP_002428314.1| Enhancer of split mgamma protein, putative [Pediculus humanus
           corporis]
 gi|212512910|gb|EEB15576.1| Enhancer of split mgamma protein, putative [Pediculus humanus
           corporis]
          Length = 194

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 87/121 (71%), Positives = 97/121 (80%), Gaps = 4/121 (3%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QPISRTYQYRKVMKPMLERKRRARINRCLDELK+LMV ALQAEGENVSKLEKADILELTV
Sbjct: 16  QPISRTYQYRKVMKPMLERKRRARINRCLDELKELMVAALQAEGENVSKLEKADILELTV 75

Query: 83  QHLQKMRRQQRL-ASNPVTDADRFRAGFTTCANEVSKCLASTP---GIDLRLGTKLMSHL 138
            HLQK+R+Q  +  S   + A+RFRAGFT CA EVS  LA+ P    +D    +KL+ HL
Sbjct: 76  NHLQKLRKQHTMNVSRDTSYAERFRAGFTQCAAEVSTYLATLPIAAAVDPTSTSKLLQHL 135

Query: 139 G 139
           G
Sbjct: 136 G 136


>gi|383852906|ref|XP_003701966.1| PREDICTED: enhancer of split mbeta protein-like [Megachile
           rotundata]
          Length = 201

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/204 (49%), Positives = 122/204 (59%), Gaps = 24/204 (11%)

Query: 17  VDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKAD 76
             +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKAD
Sbjct: 11  AGMEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKAD 70

Query: 77  ILELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAS--TPGIDLRLGTK 133
           ILELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L++     +    G +
Sbjct: 71  ILELTVRHLHTLRDARRLTLTPENSYADRFREGFTQCAQEVSSFLSTPVAAAVHPAAGAQ 130

Query: 134 LMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHS--------DTYSMPLTPASSGSSQVD 185
           LM HLG  L  ++  +  S         P SP +        + Y+ P +P S  SS  +
Sbjct: 131 LMRHLGGCLRRLEGPAGNSSSGNQTKVAPASPATNVMVNVPQNVYTPPQSPVSVASSSGE 190

Query: 186 TCDYTSQYKMYESMPSPKSVWRPW 209
           + +               +VWRPW
Sbjct: 191 STE-------------SNAVWRPW 201


>gi|7228081|emb|CAB77017.1| HLHmbeta protein [Drosophila hydei]
          Length = 205

 Score =  169 bits (428), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 128/214 (59%), Gaps = 44/214 (20%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRL-----------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           ++K+R Q++L             + ++ A+ FRAG+   ANEVSK LA+ PG+ + LGT+
Sbjct: 67  MKKLRAQKQLRLGSSSNASVAGDSKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQ 126

Query: 134 LMSHLGQRLNEMDKIS---PLSVRV---------------MDVCTPPPSPHSDTYSMPLT 175
           LMSHLG RLN +  +    P+ V V                 + TPPPS    + S   +
Sbjct: 127 LMSHLGHRLNYLQVVVPTLPIGVAVPLQTNDELSSSSSPSPALVTPPPS-ECGSASGSCS 185

Query: 176 PASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           PA S +S               S  S   +WRPW
Sbjct: 186 PAPSEAST--------------SSNSTGPMWRPW 205


>gi|359952818|gb|AEV91200.1| enhancer of split region protein HLHmb [Teleopsis dalmanni]
          Length = 212

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/134 (61%), Positives = 103/134 (76%), Gaps = 8/134 (5%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMR--RQQRLASNP------VTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           ++K+R  +Q RL   P       T A+ FRAG+   ANEVSK LA+ PG+ + LGT+LMS
Sbjct: 67  MKKLRAQKQLRLGGVPNGQDTKATIAESFRAGYIHAANEVSKTLAAVPGVSVDLGTQLMS 126

Query: 137 HLGQRLNEMDKISP 150
           HLG RLN +  + P
Sbjct: 127 HLGHRLNYLQVVVP 140


>gi|195389618|ref|XP_002053473.1| GJ23323 [Drosophila virilis]
 gi|194151559|gb|EDW66993.1| GJ23323 [Drosophila virilis]
          Length = 209

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 128/218 (58%), Gaps = 48/218 (22%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRL-----------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           ++K+R Q++L             + ++ A+ FRAG+   ANEVSK LA+ PG+ + LGT+
Sbjct: 67  MKKLRAQKQLRLGSSSNASVAGDSKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQ 126

Query: 134 LMSHLGQRLNEMDKIS---PLSVRV-------------------MDVCTPPPSPHSDTYS 171
           LMSHLG RLN +  +    P+ V V                     + TPPPS    + S
Sbjct: 127 LMSHLGHRLNYLQVVVPTLPIGVTVPLQPNDELSSNSSSSSSPSPALVTPPPS-ECGSAS 185

Query: 172 MPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
              +PA S +S               S  S   +WRPW
Sbjct: 186 GSCSPAPSEAST--------------SSNSTGPMWRPW 209


>gi|195038339|ref|XP_001990617.1| GH18148 [Drosophila grimshawi]
 gi|193894813|gb|EDV93679.1| GH18148 [Drosophila grimshawi]
          Length = 210

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/219 (43%), Positives = 129/219 (58%), Gaps = 49/219 (22%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRL-----------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           ++K+R Q++L             + ++ A+ FRAG+   ANEVSK LA+ PG+ + LGT+
Sbjct: 67  MKKLRAQKQLRLGSSSNSSVAGDSKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQ 126

Query: 134 LMSHLGQRLNEMDKISP-------LSVRVMD----------------VCTPPPSPHSDTY 170
           LMSHLG RLN +  + P       + ++  D                + TPPPS    + 
Sbjct: 127 LMSHLGHRLNYLQVVVPTLPIGGAMPLQTTDELSSSSSSGSNSPSPALVTPPPS-ECGSA 185

Query: 171 SMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           S   +PA S +S               S  S   +WRPW
Sbjct: 186 SGSCSPAPSEAST--------------SSNSTGPMWRPW 210


>gi|195454089|ref|XP_002074081.1| GK12809 [Drosophila willistoni]
 gi|194170166|gb|EDW85067.1| GK12809 [Drosophila willistoni]
          Length = 201

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 87/167 (52%), Positives = 111/167 (66%), Gaps = 27/167 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRLASNPVTD------------------ADRFRAGFTTCANEVSKCLASTPGI 126
           ++K+R Q++L    VT                   A+ FRAG+   ANEVSK LA+ P +
Sbjct: 67  MKKLRAQKQLKLGSVTAAPSGSSSPSSACDSKLSIAESFRAGYVHAANEVSKTLAAVPNV 126

Query: 127 DLRLGTKLMSHLGQRLNEMDKISP---------LSVRVMDVCTPPPS 164
            + LGT+LMSHLG RLN +  + P           V ++ V TPPPS
Sbjct: 127 SVDLGTQLMSHLGHRLNYLQVVVPTMPQPPVQDAPVSLVTVVTPPPS 173


>gi|195110331|ref|XP_001999735.1| GI22910 [Drosophila mojavensis]
 gi|193916329|gb|EDW15196.1| GI22910 [Drosophila mojavensis]
          Length = 210

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 97/219 (44%), Positives = 128/219 (58%), Gaps = 49/219 (22%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKPMLERKRRARIN+CLDELKD+MV  L  EGE++++LEKADILELTV+H
Sbjct: 7   MSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEH 66

Query: 85  LQKMRRQQRL------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K+R Q++L              + ++ A+ FRAG+   ANEVSK LA+ PG+ + LGT
Sbjct: 67  MKKLRAQKQLRLGSSSSSASVAGDSKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGT 126

Query: 133 KLMSHLGQRLNEMDKIS---PLSVRV-------------------MDVCTPPPSPHSDTY 170
           +LMSHLG RLN +  +    P+ V V                     + TPPPS    + 
Sbjct: 127 QLMSHLGHRLNYLQVVVPTLPIGVAVPLQTADELSSGSSSSSSPSPALVTPPPS-ECGSA 185

Query: 171 SMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           S   +PA S +S               S  S   +WRPW
Sbjct: 186 SGSCSPAPSEAST--------------SSNSTGPMWRPW 210


>gi|322800796|gb|EFZ21672.1| hypothetical protein SINV_06054 [Solenopsis invicta]
          Length = 204

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 99/133 (74%), Gaps = 5/133 (3%)

Query: 18  DIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
            +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKADI
Sbjct: 12  GMEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKADI 71

Query: 78  LELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLASTP---GIDLRLGTK 133
           LELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L STP    +    G +
Sbjct: 72  LELTVRHLHTLRAARRLTLTPENSYADRFRDGFTQCAQEVSTFL-STPVAATVHPAAGAQ 130

Query: 134 LMSHLGQRLNEMD 146
           LM HLG  L  ++
Sbjct: 131 LMRHLGGCLRRLE 143


>gi|350397878|ref|XP_003485018.1| PREDICTED: enhancer of split mbeta protein-like [Bombus impatiens]
          Length = 207

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 98/133 (73%), Gaps = 5/133 (3%)

Query: 18  DIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
            +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKADI
Sbjct: 12  GMEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKADI 71

Query: 78  LELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLASTP---GIDLRLGTK 133
           LELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L STP         G +
Sbjct: 72  LELTVRHLHTLRAARRLTLTPENSYADRFREGFTQCAQEVSSFL-STPVAXXXXXAAGAQ 130

Query: 134 LMSHLGQRLNEMD 146
           LM HLG  L  ++
Sbjct: 131 LMRHLGGCLRRLE 143


>gi|110762524|ref|XP_001120327.1| PREDICTED: enhancer of split mbeta protein-like [Apis mellifera]
          Length = 227

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 99/135 (73%), Gaps = 3/135 (2%)

Query: 18  DIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
            +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKADI
Sbjct: 12  GMEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKADI 71

Query: 78  LELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAS--TPGIDLRLGTKL 134
           LELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L++     +    G +L
Sbjct: 72  LELTVRHLHTLRAARRLTLTPENSYADRFREGFTQCAQEVSSFLSTPVAAAVHPAAGAQL 131

Query: 135 MSHLGQRLNEMDKIS 149
           M HLG  L  ++  S
Sbjct: 132 MRHLGGCLRRLEGTS 146


>gi|380027490|ref|XP_003697456.1| PREDICTED: enhancer of split mbeta protein-like [Apis florea]
          Length = 221

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 98/132 (74%), Gaps = 3/132 (2%)

Query: 18  DIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
            +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKADI
Sbjct: 12  GMEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKADI 71

Query: 78  LELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAS--TPGIDLRLGTKL 134
           LELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L++     +    G +L
Sbjct: 72  LELTVRHLHTLRAARRLTLTPENSYADRFREGFTQCAQEVSSFLSTPVAAAVHPAAGAQL 131

Query: 135 MSHLGQRLNEMD 146
           M HLG  L  ++
Sbjct: 132 MRHLGGCLRRLE 143


>gi|340724348|ref|XP_003400544.1| PREDICTED: enhancer of split mbeta protein-like [Bombus terrestris]
          Length = 207

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/131 (64%), Positives = 98/131 (74%), Gaps = 3/131 (2%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKADIL
Sbjct: 13  MEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKADIL 72

Query: 79  ELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAS--TPGIDLRLGTKLM 135
           ELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L++     +    G +LM
Sbjct: 73  ELTVRHLHTLRAARRLTLTPENSYADRFREGFTQCAQEVSSFLSTPVAAAVHPAAGAQLM 132

Query: 136 SHLGQRLNEMD 146
            HLG  L  ++
Sbjct: 133 RHLGGCLRRLE 143


>gi|359952827|gb|AEV91209.1| enhancer of split region protein HLHm7 [Teleopsis dalmanni]
          Length = 204

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/198 (44%), Positives = 125/198 (63%), Gaps = 15/198 (7%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE-GENVSKLEKADILELTVQH 84
           S+TYQYRKVMKP+LERKRRARIN+CLD+LKDL+   +Q + G+   KLEKADILELTVQH
Sbjct: 8   SKTYQYRKVMKPLLERKRRARINKCLDDLKDLIGECMQQQCGDPSVKLEKADILELTVQH 67

Query: 85  LQKMRRQQRLASNPVTDADR-FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           L+K++ Q++ ++   T +   FR+G+   ANEVS+CLAS P +D+  GT+LM+HLG RLN
Sbjct: 68  LRKLKTQKQNSTQDNTKSQHSFRSGYIQAANEVSRCLASLPKVDVAFGTQLMTHLGLRLN 127

Query: 144 EMDKISPLSVRV---MDVCTPPPSPHSDTYSMPLTPASSG---SSQVDTCDYTSQYKMYE 197
           +++        +   + +     S H  + +M  +P SSG    S+   C      K + 
Sbjct: 128 QLESAEEAHTAINTPLSINCGGASAHIASTAM-YSPVSSGYASDSENSRCSPALSSKSFS 186

Query: 198 SMPSP------KSVWRPW 209
           S+ +       K VWRPW
Sbjct: 187 SICNQGLLQINKQVWRPW 204


>gi|307212047|gb|EFN87930.1| Enhancer of split mgamma protein [Harpegnathos saltator]
          Length = 208

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/131 (64%), Positives = 99/131 (75%), Gaps = 3/131 (2%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKADIL
Sbjct: 13  MEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKADIL 72

Query: 79  ELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAST--PGIDLRLGTKLM 135
           ELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L+++    +    G +LM
Sbjct: 73  ELTVRHLHTLRAARRLTLTPENSYADRFRDGFTQCAQEVSTFLSTSVAAAVHPAAGAQLM 132

Query: 136 SHLGQRLNEMD 146
            HLG  L  ++
Sbjct: 133 RHLGGCLRRLE 143


>gi|251752780|dbj|BAH83645.1| enhancer of split mgamma [Bombyx mori]
          Length = 160

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/127 (62%), Positives = 98/127 (77%), Gaps = 11/127 (8%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV
Sbjct: 14  EPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 73

Query: 83  QHLQKMRRQQRLASNP-VTDADRFRAGFTTCANEVSKCLASTP----------GIDLRLG 131
           +HL  ++++ +L   P ++  +RFRAGFT CA EVS+ +A+             +D + G
Sbjct: 74  RHLHNLKQRGQLVVKPEMSYTERFRAGFTQCATEVSQFIANATLAANAMQRQGPVDPQAG 133

Query: 132 TKLMSHL 138
            +L+ HL
Sbjct: 134 ARLLQHL 140


>gi|332017586|gb|EGI58286.1| Enhancer of split mgamma protein [Acromyrmex echinatior]
          Length = 246

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/131 (64%), Positives = 98/131 (74%), Gaps = 3/131 (2%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKADIL
Sbjct: 13  MEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKADIL 72

Query: 79  ELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAS--TPGIDLRLGTKLM 135
           ELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L++     +    G +LM
Sbjct: 73  ELTVRHLHTLRAARRLTLTPENSYADRFRDGFTQCAQEVSTFLSTPVAAAVHPAAGAQLM 132

Query: 136 SHLGQRLNEMD 146
            HLG  L  ++
Sbjct: 133 RHLGGCLRRLE 143


>gi|307170542|gb|EFN62757.1| Enhancer of split mgamma protein [Camponotus floridanus]
          Length = 190

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/131 (64%), Positives = 98/131 (74%), Gaps = 3/131 (2%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           +E  +P+SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV+KLEKADIL
Sbjct: 1   MEYEEPVSRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVAKLEKADIL 60

Query: 79  ELTVQHLQKMRRQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAS--TPGIDLRLGTKLM 135
           ELTV+HL  +R  +RL   P    ADRFR GFT CA EVS  L++     +    G +LM
Sbjct: 61  ELTVRHLHTLRAARRLTLTPENSYADRFRDGFTQCAQEVSTFLSTPVAAAVHPAAGAQLM 120

Query: 136 SHLGQRLNEMD 146
            HLG  L  ++
Sbjct: 121 RHLGGCLRRLE 131


>gi|225713514|gb|ACO12603.1| Enhancer of split mgamma protein [Lepeophtheirus salmonis]
          Length = 169

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 77/130 (59%), Positives = 106/130 (81%), Gaps = 8/130 (6%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEG-ENVSKLEKADILELTVQ 83
           +S+T QYRKVMKP+LERKRRARIN+CLDELK+LM+ ALQ +G E+++KLEKADILELTV+
Sbjct: 10  MSKTRQYRKVMKPLLERKRRARINKCLDELKELMIEALQTQGEESITKLEKADILELTVR 69

Query: 84  HLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           HL+K++ Q+ ++ N  + +DR+ AG+T CA+EVS+ L+S PGI++  G++LMSHLG  L 
Sbjct: 70  HLRKLKNQEVISKN--SPSDRYIAGYTACASEVSQYLSSIPGINVHFGSELMSHLGNNLT 127

Query: 144 EMDKISPLSV 153
           +     PLSV
Sbjct: 128 K-----PLSV 132


>gi|290561737|gb|ADD38266.1| Enhancer of split mgamma protein [Lepeophtheirus salmonis]
          Length = 176

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 76/130 (58%), Positives = 106/130 (81%), Gaps = 8/130 (6%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEG-ENVSKLEKADILELTVQ 83
           +S+T+QYRKVMKP+LERKRRARIN+CLDE K+LM+ ALQ +G E+++KLEKADILELTV+
Sbjct: 10  MSKTHQYRKVMKPLLERKRRARINKCLDEPKELMIEALQTQGEESITKLEKADILELTVR 69

Query: 84  HLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           HL+K++ Q+ ++ N  + +DR+ AG+T CA+EVS+ L+S PGI++  G++LMSHLG  L 
Sbjct: 70  HLRKLKNQEVISKN--SPSDRYIAGYTACASEVSQYLSSIPGINVHFGSELMSHLGNNLT 127

Query: 144 EMDKISPLSV 153
           +     PLSV
Sbjct: 128 K-----PLSV 132


>gi|195454108|ref|XP_002074090.1| GK14459 [Drosophila willistoni]
 gi|194170175|gb|EDW85076.1| GK14459 [Drosophila willistoni]
          Length = 200

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/205 (45%), Positives = 127/205 (61%), Gaps = 31/205 (15%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +  +G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQQGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRR-QQRLASNP--VTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           L+K+++ +Q  A+ P  V     FRAG+   ANEVS+ LA+ P +D+  GT LM+HLG R
Sbjct: 65  LRKLKQSRQAAAAAPETVLPEQSFRAGYIRAANEVSRALATLPKVDVAFGTTLMTHLGMR 124

Query: 142 LNEMD---------KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
           LN+++         K +PLS++    C+   S + DT+S    P SSG +       +S 
Sbjct: 125 LNQLEQPPMEQAVSKQAPLSIQ----CS-SSSYNRDTFS----PVSSGYASDSESSSSSS 175

Query: 193 YKMYES--------MPSPKSVWRPW 209
                S        + SP  VWRPW
Sbjct: 176 SSSCRSPIAQSLLQISSPGQVWRPW 200


>gi|195349621|ref|XP_002041341.1| GM10299 [Drosophila sechellia]
 gi|194123036|gb|EDW45079.1| GM10299 [Drosophila sechellia]
          Length = 186

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/194 (46%), Positives = 122/194 (62%), Gaps = 23/194 (11%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRR-QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           L+K++  ++++ SNP      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN
Sbjct: 65  LRKLKESKKQVPSNP---EQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLN 121

Query: 144 EMDK--------ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKM 195
           ++++         +PLS+    VC       S + S   + +S  S    +  Y S  + 
Sbjct: 122 QLEQPMEQPQAVNTPLSI----VCG-----SSSSSSSYSSASSCSSISPVSSGYASDNES 172

Query: 196 YESMPSPKSVWRPW 209
              + SP  VWRPW
Sbjct: 173 LLQISSPGQVWRPW 186


>gi|55715282|gb|AAV59086.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715373|gb|AAV59170.1| enhancer of split complex m7 protein [Drosophila melanogaster]
          Length = 184

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 116/185 (62%), Gaps = 7/185 (3%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 65  LRKLKESKKHV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 122

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKS 204
           +++  P+  +   V TP       + S     ++S S    +  Y S  +    + SP  
Sbjct: 123 LEQ--PME-QPQAVNTPLSIVCGSSSSSSTYSSASSSISPVSSGYASDNESLLQISSPGQ 179

Query: 205 VWRPW 209
           VWRPW
Sbjct: 180 VWRPW 184


>gi|55715451|gb|AAV59242.1| enhancer of split complex m7 protein [Drosophila simulans]
          Length = 186

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/193 (45%), Positives = 118/193 (61%), Gaps = 21/193 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 65  LRKLKESKKQV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 122

Query: 145 MDK--------ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMY 196
           +++         +PLS+    VC       S + S   + +S  S    +  Y S  +  
Sbjct: 123 LEQPMEQAQAVHTPLSI----VCG-----SSSSSSSYSSASSCSSISPVSSGYASDNESL 173

Query: 197 ESMPSPKSVWRPW 209
             + SP  VWRPW
Sbjct: 174 LQISSPGQVWRPW 186


>gi|195574071|ref|XP_002105013.1| HLHm7 [Drosophila simulans]
 gi|55715463|gb|AAV59253.1| enhancer of split complex m7 protein [Drosophila simulans]
 gi|194200940|gb|EDX14516.1| HLHm7 [Drosophila simulans]
          Length = 186

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/193 (45%), Positives = 118/193 (61%), Gaps = 21/193 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 65  LRKLKESKKQV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 122

Query: 145 MDK--------ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMY 196
           +++         +PLS+    VC       S + S   + +S  S    +  Y S  +  
Sbjct: 123 LEQPMEQPQAVNTPLSI----VCG-----SSSSSSSYSSASSCSSISPVSSGYASDNESL 173

Query: 197 ESMPSPKSVWRPW 209
             + SP  VWRPW
Sbjct: 174 LQISSPGQVWRPW 186


>gi|194908115|ref|XP_001981708.1| GG11458 [Drosophila erecta]
 gi|190656346|gb|EDV53578.1| GG11458 [Drosophila erecta]
          Length = 186

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/193 (45%), Positives = 118/193 (61%), Gaps = 21/193 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 65  LRKLKESKKQV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 122

Query: 145 MDK--------ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMY 196
           +++         +PLS+    VC       S + S   + +S  S    +  Y S  +  
Sbjct: 123 LEQPMEQRQAVNTPLSI----VCG-----SSLSSSSYSSASSCSSISPVSSGYASDNESL 173

Query: 197 ESMPSPKSVWRPW 209
             + SP  VWRPW
Sbjct: 174 LQISSPGQVWRPW 186


>gi|195504131|ref|XP_002098949.1| HLHm7 [Drosophila yakuba]
 gi|55715016|gb|AAV59028.1| enhancer of split m7 protein [Drosophila yakuba]
 gi|194185050|gb|EDW98661.1| HLHm7 [Drosophila yakuba]
          Length = 186

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/193 (45%), Positives = 118/193 (61%), Gaps = 21/193 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 65  LRKLKESKKQV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 122

Query: 145 MDK--------ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMY 196
           +++         +PLS+    VC       S + S   + +S  S    +  Y S  +  
Sbjct: 123 LEQPMEQRQAVNTPLSI----VCG-----SSSSSSSYSSASSCSSISPVSSGYASDNESL 173

Query: 197 ESMPSPKSVWRPW 209
             + SP  VWRPW
Sbjct: 174 LQISSPGQVWRPW 186


>gi|17981745|ref|NP_536753.1| enhancer of split m7, helix-loop-helix [Drosophila melanogaster]
 gi|119572|sp|P13097.1|ESM7_DROME RecName: Full=Enhancer of split m7 protein; Short=E(spl)m7
 gi|7954|emb|CAA34553.1| unnamed protein product [Drosophila melanogaster]
 gi|7301428|gb|AAF56554.1| enhancer of split m7, helix-loop-helix [Drosophila melanogaster]
 gi|55715243|gb|AAV59050.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715256|gb|AAV59062.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715269|gb|AAV59074.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715295|gb|AAV59098.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715308|gb|AAV59110.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715321|gb|AAV59122.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715334|gb|AAV59134.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715347|gb|AAV59146.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715360|gb|AAV59158.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715386|gb|AAV59182.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715399|gb|AAV59194.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715412|gb|AAV59206.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715425|gb|AAV59218.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|55715438|gb|AAV59230.1| enhancer of split complex m7 protein [Drosophila melanogaster]
 gi|66571102|gb|AAY51516.1| IP09063p [Drosophila melanogaster]
 gi|220943380|gb|ACL84233.1| HLHm7-PA [synthetic construct]
 gi|220953352|gb|ACL89219.1| HLHm7-PA [synthetic construct]
          Length = 186

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/193 (45%), Positives = 118/193 (61%), Gaps = 21/193 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 65  LRKLKESKKHV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 122

Query: 145 MDK--------ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMY 196
           +++         +PLS+    VC       S + S   + +S  S    +  Y S  +  
Sbjct: 123 LEQPMEQPQAVNTPLSI----VCG-----SSSSSSTYSSASSCSSISPVSSGYASDNESL 173

Query: 197 ESMPSPKSVWRPW 209
             + SP  VWRPW
Sbjct: 174 LQISSPGQVWRPW 186


>gi|225719680|gb|ACO15686.1| Enhancer of split mgamma protein [Caligus clemensi]
          Length = 173

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/130 (54%), Positives = 100/130 (76%), Gaps = 13/130 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE-GENVSKLEKADILELTVQ 83
           +S+T+QYRKVMKP+LERKRRARIN+CLDE+KD++V  LQA+ GE+++KLEKAD+LE+TV+
Sbjct: 12  VSKTHQYRKVMKPLLERKRRARINKCLDEIKDILVETLQADSGESITKLEKADVLEMTVR 71

Query: 84  HLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           HL+K + Q+          DRF +G+TTCAN VS+ L++ PG+++     +MSHLGQ+L 
Sbjct: 72  HLRKTQNQK-------NSPDRFFSGYTTCANHVSQYLSTVPGVNVHFARDMMSHLGQQLT 124

Query: 144 EMDKISPLSV 153
           +     PLSV
Sbjct: 125 Q-----PLSV 129


>gi|328707902|ref|XP_001949200.2| PREDICTED: protein hairy-like [Acyrthosiphon pisum]
          Length = 269

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 92/120 (76%), Gaps = 5/120 (4%)

Query: 24  PISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQ 83
           PISRT  YRK+ KP+LERKRRARINRCLDELKDLM +AL+AEGENV KLEKADILE TV+
Sbjct: 8   PISRTVTYRKITKPLLERKRRARINRCLDELKDLMFSALEAEGENVDKLEKADILEFTVK 67

Query: 84  HLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           HLQK+ R+     +PV +A +F+ GF+ CA+E    L S PG+D  +G +L+ +L + ++
Sbjct: 68  HLQKITRR-----DPVEEAYKFQEGFSHCASEACSFLLSLPGLDSVVGRRLVEYLAKSVS 122


>gi|194743682|ref|XP_001954329.1| GF16801 [Drosophila ananassae]
 gi|190627366|gb|EDV42890.1| GF16801 [Drosophila ananassae]
          Length = 180

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/196 (44%), Positives = 115/196 (58%), Gaps = 33/196 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 7   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 64

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K+++ +     P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 65  LRKLKQAKVQQPQP---EQSFRAGYIRAANEVSRALASLPKVDVAFGTTLMTHLGMRLNQ 121

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSM--PL---------TPASSGSSQVDTCDYTSQY 193
           +++                 P  +T SM  PL         + +S  S    +  Y S  
Sbjct: 122 LEQ-----------------PMEETQSMNTPLSIVCSSSSSSSSSCSSISPVSSGYASDN 164

Query: 194 KMYESMPSPKSVWRPW 209
           +    + SP  VWRPW
Sbjct: 165 ESLLQISSPGQVWRPW 180


>gi|194743702|ref|XP_001954339.1| GF16795 [Drosophila ananassae]
 gi|190627376|gb|EDV42900.1| GF16795 [Drosophila ananassae]
          Length = 182

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/200 (45%), Positives = 117/200 (58%), Gaps = 29/200 (14%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           +E  + +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADIL
Sbjct: 3   VEGQRFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADIL 62

Query: 79  ELTVQHLQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ELTV +L K ++QQRLA NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT
Sbjct: 63  ELTVNYL-KSQQQQRLA-NPQSPGSSQVNFDKFRAGYTQAAYEVSHIFSTVPGLDLKFGT 120

Query: 133 KLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSP--HSDTYSMPLTPAS-SGSSQVDTCDY 189
            LM  LG +L +M +        MD   P   P   S+  S    P   SGS Q      
Sbjct: 121 HLMKQLGHQLKDMKQ-------EMDCSEPNDEPVNLSERKSDEHVPQKRSGSPQEQ---- 169

Query: 190 TSQYKMYESMPSPKSVWRPW 209
                  E  P  + VWRPW
Sbjct: 170 -------EENPQGEDVWRPW 182


>gi|164449962|gb|ABY56429.1| HLHm7, partial [Drosophila simulans]
 gi|164449982|gb|ABY56439.1| HLHm7, partial [Drosophila simulans]
          Length = 182

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/123 (56%), Positives = 92/123 (74%), Gaps = 4/123 (3%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 4   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 61

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 62  LRKLKESKKQV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 119

Query: 145 MDK 147
           +++
Sbjct: 120 LEQ 122


>gi|164449956|gb|ABY56426.1| HLHm7, partial [Drosophila simulans]
          Length = 182

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/123 (56%), Positives = 92/123 (74%), Gaps = 4/123 (3%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 4   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 61

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 62  LRKLKESKKQV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 119

Query: 145 MDK 147
           +++
Sbjct: 120 LEQ 122


>gi|164449952|gb|ABY56424.1| HLHm7, partial [Drosophila simulans]
 gi|164449954|gb|ABY56425.1| HLHm7, partial [Drosophila simulans]
 gi|164449958|gb|ABY56427.1| HLHm7, partial [Drosophila simulans]
 gi|164449960|gb|ABY56428.1| HLHm7, partial [Drosophila simulans]
 gi|164449964|gb|ABY56430.1| HLHm7, partial [Drosophila simulans]
 gi|164449966|gb|ABY56431.1| HLHm7, partial [Drosophila simulans]
 gi|164449968|gb|ABY56432.1| HLHm7, partial [Drosophila simulans]
 gi|164449970|gb|ABY56433.1| HLHm7, partial [Drosophila simulans]
 gi|164449972|gb|ABY56434.1| HLHm7, partial [Drosophila simulans]
 gi|164449974|gb|ABY56435.1| HLHm7, partial [Drosophila simulans]
 gi|164449976|gb|ABY56436.1| HLHm7, partial [Drosophila simulans]
 gi|164449978|gb|ABY56437.1| HLHm7, partial [Drosophila simulans]
 gi|164449980|gb|ABY56438.1| HLHm7, partial [Drosophila simulans]
          Length = 182

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/123 (56%), Positives = 92/123 (74%), Gaps = 4/123 (3%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLDELKDLM   +   G+  +K EKADILE+TVQH
Sbjct: 4   MSKTYQYRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQH 61

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K++  ++    P      FRAG+   ANEVS+ LAS P +D+  GT LM+HLG RLN+
Sbjct: 62  LRKLKESKKQV--PANPEQSFRAGYIRAANEVSRALASLPRVDVAFGTTLMTHLGMRLNQ 119

Query: 145 MDK 147
           +++
Sbjct: 120 LEQ 122


>gi|195389634|ref|XP_002053481.1| GJ23909 [Drosophila virilis]
 gi|194151567|gb|EDW67001.1| GJ23909 [Drosophila virilis]
          Length = 197

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/201 (42%), Positives = 118/201 (58%), Gaps = 26/201 (12%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLM   +    +  +K EKADILE+TVQ+
Sbjct: 7   LSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMAECVAQTSD--AKFEKADILEVTVQY 64

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           L+K+++ +   +        FRAG+   ANEVS+ LA+ P +D+  GT LM+HLG RLN+
Sbjct: 65  LRKLKQTKSANATASATEHSFRAGYIRAANEVSRALAALPKVDVAFGTTLMTHLGMRLNQ 124

Query: 145 MDK----------ISPLSVRVMDVCTPPPSPHS--DTYSMPLTPASSGSSQVDTCDYTSQ 192
           +++           +PLS+     C    S  S  D YS    P SSG +    C   S 
Sbjct: 125 LEQPVEQPSPMAPHAPLSIN----CGSGYSTSSSRDAYS----PVSSGYASDSDCSSGSS 176

Query: 193 YKMYE----SMPSPKSVWRPW 209
             +       + +  SVWRPW
Sbjct: 177 TPIAAQSLLQISNTGSVWRPW 197


>gi|195110325|ref|XP_001999732.1| GI24685 [Drosophila mojavensis]
 gi|193916326|gb|EDW15193.1| GI24685 [Drosophila mojavensis]
          Length = 185

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 119/204 (58%), Gaps = 34/204 (16%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           +E  + +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADIL
Sbjct: 3   VEGQRFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADIL 62

Query: 79  ELTVQHLQKMRRQQRLASNPVT-------------DADRFRAGFTTCANEVSKCLASTPG 125
           ELTV +L K ++Q+RLA+                 + D+FRAG+T  A EVS   ++ PG
Sbjct: 63  ELTVNYL-KTQQQRRLAAGSSAPTSTPTSPPPSQLNFDKFRAGYTQAAYEVSHIFSTVPG 121

Query: 126 IDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVD 185
           +DL+ GT LM  LG +L +M +          + +P PS  +   S P+  A +G+ Q  
Sbjct: 122 VDLQFGTHLMKQLGHQLKDMKQ---------QLSSPVPSEQA---SEPVNLA-NGNEQRS 168

Query: 186 TCDYTSQYKMYESMPSPKSVWRPW 209
           T          E++   + VWRPW
Sbjct: 169 TSP-------QENLDKGEDVWRPW 185


>gi|195110349|ref|XP_001999744.1| GI24692 [Drosophila mojavensis]
 gi|193916338|gb|EDW15205.1| GI24692 [Drosophila mojavensis]
          Length = 207

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/206 (42%), Positives = 122/206 (59%), Gaps = 28/206 (13%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLM   +   G+  +K EKADILE+TV +L
Sbjct: 8   SKTYQYRKVMKPLLERKRRARINKCLDDLKDLMAECVAQTGD--AKFEKADILEVTVDYL 65

Query: 86  QKMRRQQRLASNPVTDA----DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           +K+++ +   SN    A      FRAG+   ANEVS+ LA+ P +D+  GT LM+HLG R
Sbjct: 66  RKLKQSKAANSNSKAAASATEHSFRAGYIRAANEVSRALAALPKVDVAFGTTLMTHLGMR 125

Query: 142 LNEMDK----------ISPLSVRVMDV-----CTPPPSPHSDTYSMPLTPASSGSSQVDT 186
           LN++++           +PLS+    V      +   S + DTYS    P SSG +    
Sbjct: 126 LNQLEQPMEHTAPMSMNTPLSINCDSVYSSKSSSSSSSSNRDTYS----PVSSGYASDSD 181

Query: 187 CDYT---SQYKMYESMPSPKSVWRPW 209
           C  +   +   + +   +  SVWRPW
Sbjct: 182 CGSSTPIAAQSLLQISNNGTSVWRPW 207


>gi|55715290|gb|AAV59093.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715355|gb|AAV59153.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
          Length = 173

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 113/192 (58%), Gaps = 34/192 (17%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT+LM  L
Sbjct: 69  L-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTRLMKQL 126

Query: 139 GQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYE 197
           G +L +M +       ++D+   P                     V+  D   S+    E
Sbjct: 127 GHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKSPREE 161

Query: 198 SMPSPKSVWRPW 209
            +   + VWRPW
Sbjct: 162 DIHHGEEVWRPW 173


>gi|24650220|ref|NP_524503.2| enhancer of split mdelta, helix-loop-helix [Drosophila
           melanogaster]
 gi|195349601|ref|XP_002041331.1| GM10293 [Drosophila sechellia]
 gi|195574049|ref|XP_002105002.1| E(spl) region transcript mdelta [Drosophila simulans]
 gi|12643710|sp|Q01071.1|ESMD_DROME RecName: Full=Enhancer of split mdelta protein; Short=E(spl)mdelta;
           AltName: Full=HLH-mdelta; AltName: Full=Split locus
           enhancer protein mC
 gi|158497|gb|AAA28911.1| split locus enhancer protein mC [Drosophila melanogaster]
 gi|7301418|gb|AAF56544.1| enhancer of split mdelta, helix-loop-helix [Drosophila
           melanogaster]
 gi|55715238|gb|AAV59045.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715251|gb|AAV59057.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715264|gb|AAV59069.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715277|gb|AAV59081.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715303|gb|AAV59105.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715316|gb|AAV59117.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715329|gb|AAV59129.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715342|gb|AAV59141.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715368|gb|AAV59165.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715394|gb|AAV59189.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715407|gb|AAV59201.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715420|gb|AAV59213.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|55715433|gb|AAV59225.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
 gi|73853442|gb|AAY51528.2| IP01594p [Drosophila melanogaster]
 gi|194123026|gb|EDW45069.1| GM10293 [Drosophila sechellia]
 gi|194200929|gb|EDX14505.1| E(spl) region transcript mdelta [Drosophila simulans]
 gi|220943376|gb|ACL84231.1| HLHmdelta-PA [synthetic construct]
 gi|220953342|gb|ACL89214.1| HLHmdelta-PA [synthetic construct]
          Length = 173

 Score =  139 bits (349), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 112/192 (58%), Gaps = 34/192 (17%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  L
Sbjct: 69  L-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQL 126

Query: 139 GQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYE 197
           G +L +M +       ++D+   P                     V+  D   S+    E
Sbjct: 127 GHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKSPREE 161

Query: 198 SMPSPKSVWRPW 209
            +   + VWRPW
Sbjct: 162 DIHHGEEVWRPW 173


>gi|55715381|gb|AAV59177.1| enhancer of split complex mdelta protein [Drosophila melanogaster]
          Length = 173

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 112/192 (58%), Gaps = 34/192 (17%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  L
Sbjct: 69  L-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQL 126

Query: 139 GQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYE 197
           G +L +M +       ++D+   P                     V+  D   S+    E
Sbjct: 127 GHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKSPREE 161

Query: 198 SMPSPKSVWRPW 209
            +   + VWRPW
Sbjct: 162 VIHHGEEVWRPW 173


>gi|195454084|ref|XP_002074079.1| GK14454 [Drosophila willistoni]
 gi|194170164|gb|EDW85065.1| GK14454 [Drosophila willistoni]
          Length = 184

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 109/199 (54%), Gaps = 37/199 (18%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRL-----------ASNPVT---DADRFRAGFTTCANEVSKCLASTPGIDLRL 130
           L K ++QQRL           ASN  +   + D+FRAG+T  A EVS   ++ PG+DL+ 
Sbjct: 69  L-KAQQQQRLISTSGQQQSSNASNAESAPINFDKFRAGYTQAAYEVSHIFSTVPGLDLKF 127

Query: 131 GTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT 190
           GT LM  LG +L +M                    HSD   + L+       Q    D  
Sbjct: 128 GTHLMKQLGHQLKDM----------------KEHLHSDDEPVNLSDRKDEQLQQQLPDAE 171

Query: 191 SQYKMYESMPSPKSVWRPW 209
                 E +   + VWRPW
Sbjct: 172 ------EDLHQGEDVWRPW 184


>gi|55714873|gb|AAV59022.1| enhancer of split mdelta protein [Drosophila yakuba]
          Length = 173

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/127 (55%), Positives = 94/127 (74%), Gaps = 8/127 (6%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT+LM  L
Sbjct: 69  L-KAQQQQRVA-NPQSSPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTQLMKQL 126

Query: 139 GQRLNEM 145
           G +L +M
Sbjct: 127 GHQLKDM 133


>gi|8078|emb|CAA47433.1| helix-loop-helix protein [Drosophila melanogaster]
          Length = 173

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 111/192 (57%), Gaps = 34/192 (17%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNP------VTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           L K ++QQR+A NP        + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  L
Sbjct: 69  L-KAQQQQRVA-NPQWPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQL 126

Query: 139 GQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYE 197
           G +L +M +       ++D+   P                     V+  D   S+    E
Sbjct: 127 GHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKSPREE 161

Query: 198 SMPSPKSVWRPW 209
            +   + VWRPW
Sbjct: 162 DIHHGEEVWRPW 173


>gi|195389614|ref|XP_002053471.1| GJ23902 [Drosophila virilis]
 gi|194151557|gb|EDW66991.1| GJ23902 [Drosophila virilis]
          Length = 188

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 119/209 (56%), Gaps = 41/209 (19%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           +E  + +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE V+KLEKADIL
Sbjct: 3   VEGQRFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVNKLEKADIL 62

Query: 79  ELTVQHLQKMRRQQRLA----------SNPVT------DADRFRAGFTTCANEVSKCLAS 122
           ELTV +L K ++QQRLA          S P +      + D+FRAG+T  A EVS   ++
Sbjct: 63  ELTVNYL-KTQQQQRLACGSAGTPPDMSTPTSPPANQLNFDKFRAGYTQAAYEVSHIFST 121

Query: 123 TPGIDLRLGTKLMSHLGQRLNEMDK--ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSG 180
            PG+DL+ GT LM  LG +L +M +  ISP+             P  D    P+  A +G
Sbjct: 122 VPGVDLKFGTHLMKQLGHQLKDMKQQLISPV-------------PSEDAIE-PVNLA-NG 166

Query: 181 SSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
             Q  T          E++   + VWRPW
Sbjct: 167 KQQRSTSP-------QENLDKGEDVWRPW 188


>gi|195038357|ref|XP_001990626.1| GH19458 [Drosophila grimshawi]
 gi|193894822|gb|EDV93688.1| GH19458 [Drosophila grimshawi]
          Length = 207

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 32/209 (15%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLM   +    +  +K EKADILE+TVQ+
Sbjct: 7   LSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMAECVAQTSD--AKFEKADILEVTVQY 64

Query: 85  LQKMRRQQRL-ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           L+++++ +    S  +     FRAG+   ANEVS+ LA+ P +D+  GT LM+HLG RLN
Sbjct: 65  LRQLKQSKAAPTSAAIAPEHSFRAGYIRAANEVSRALAALPKVDVTFGTTLMTHLGMRLN 124

Query: 144 EMDK----------ISPLSVRVMDVCTPPP-------------SPHSDTYSMPLTPASSG 180
           ++++           +PLS+      T                SP S  Y+     ASSG
Sbjct: 125 QLEQPMEQPMPMAMHTPLSINCGSASTTTTTTSCSSISSRDAFSPVSSGYASDSDCASSG 184

Query: 181 SSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           SS         Q      + +   VWRPW
Sbjct: 185 SSTPIAAQSLLQ------ISATDKVWRPW 207


>gi|55715446|gb|AAV59237.1| enhancer of split complex mdelta protein [Drosophila simulans]
 gi|55715459|gb|AAV59249.1| enhancer of split complex mdelta protein [Drosophila simulans]
          Length = 173

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 112/191 (58%), Gaps = 32/191 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  L
Sbjct: 69  L-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQL 126

Query: 139 GQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
           G +L +M +       ++D+   P +  +   S   +P                    E 
Sbjct: 127 GHQLKDMKQ----EEEIIDMAEEPVNLANQKRSK--SPRE------------------ED 162

Query: 199 MPSPKSVWRPW 209
           +   + VWRPW
Sbjct: 163 IHHGEEVWRPW 173


>gi|194908170|ref|XP_001981720.1| GG11449 [Drosophila erecta]
 gi|190656358|gb|EDV53590.1| GG11449 [Drosophila erecta]
          Length = 173

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/127 (55%), Positives = 93/127 (73%), Gaps = 8/127 (6%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  L
Sbjct: 69  L-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQL 126

Query: 139 GQRLNEM 145
           G +L +M
Sbjct: 127 GHQLKDM 133


>gi|195504156|ref|XP_002098960.1| E(spl) region transcript mdelta [Drosophila yakuba]
 gi|194185061|gb|EDW98672.1| E(spl) region transcript mdelta [Drosophila yakuba]
          Length = 173

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/127 (55%), Positives = 93/127 (73%), Gaps = 8/127 (6%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  L
Sbjct: 69  L-KAQQQQRVA-NPQSSPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQL 126

Query: 139 GQRLNEM 145
           G +L +M
Sbjct: 127 GHQLKDM 133


>gi|251752778|dbj|BAH83644.1| enhancer of split mbeta-2 [Bombyx mori]
          Length = 163

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 97/142 (68%), Gaps = 10/142 (7%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+T +Y+K+ KP+LERKRRARINRCLDELKDLMV AL+ + +N+SKLEKADILELTV HL
Sbjct: 1   SKTAKYKKITKPLLERKRRARINRCLDELKDLMVGALEIDDDNLSKLEKADILELTVNHL 60

Query: 86  QKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
            K+   +    +PV +A +F+AGF  CA E  + + S P +D  +   L+SHL + +   
Sbjct: 61  TKLHSPK----DPVLEAKKFQAGFGQCAAEACRFIMSVPDLDANVSQNLISHLSRLITAQ 116

Query: 146 DKISPLSVRVMDVCT--PPPSP 165
               PL+++V +  T  PP SP
Sbjct: 117 ----PLTIQVPERATFSPPTSP 134


>gi|332017589|gb|EGI58289.1| Enhancer of split mgamma protein [Acromyrmex echinatior]
          Length = 358

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/135 (53%), Positives = 92/135 (68%), Gaps = 10/135 (7%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
            P+SRTYQY+K+ KP+LERKRRARINRCLDELKDLMV AL+ EGEN+SKLEKADILELTV
Sbjct: 81  HPVSRTYQYKKITKPLLERKRRARINRCLDELKDLMVDALETEGENISKLEKADILELTV 140

Query: 83  QHLQKMRRQQ------RLAS-NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLM 135
           +HLQK++  +       +AS + ++   R+++GF  CA E  + L+S PG       +L 
Sbjct: 141 RHLQKLQASRPSGLSVTIASGDEISAESRWQSGFGHCAAEAYRFLSSLPG---EAAERLA 197

Query: 136 SHLGQRLNEMDKISP 150
            HL   L      SP
Sbjct: 198 RHLAAGLQTGQTNSP 212


>gi|357615020|gb|EHJ69429.1| enhancer of split mgamma [Danaus plexippus]
          Length = 211

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/115 (61%), Positives = 85/115 (73%), Gaps = 11/115 (9%)

Query: 35  MKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRL 94
           MKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV+HL  ++R+ +L
Sbjct: 1   MKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVRHLHSLKRRGQL 60

Query: 95  ASNP-VTDADRFRAGFTTCANEVSKCLAST----------PGIDLRLGTKLMSHL 138
              P ++ A+RFRAGF  CA EVS+ + S             +D + G +L+ HL
Sbjct: 61  VLKPEMSYAERFRAGFAQCATEVSQFITSATVAANAMQRQGPVDPQAGARLLQHL 115


>gi|125776113|ref|XP_001359172.1| GA20991 [Drosophila pseudoobscura pseudoobscura]
 gi|195151967|ref|XP_002016910.1| GL21813 [Drosophila persimilis]
 gi|54638913|gb|EAL28315.1| GA20991 [Drosophila pseudoobscura pseudoobscura]
 gi|194111967|gb|EDW34010.1| GL21813 [Drosophila persimilis]
          Length = 188

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 112/196 (57%), Gaps = 27/196 (13%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+G+ VSKLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGDQVSKLEKADILELTVNY 68

Query: 85  LQKMRRQQRLASNPV-----------TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           L K ++QQRLAS               + D+FRAG+T  A EVS   ++ PG+DL+ GT 
Sbjct: 69  L-KTQQQQRLASPSSPSSTSSSASSQVNFDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTH 127

Query: 134 LMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQY 193
           LM  LG +L +M +         ++ TP      D    P+  +   S +    +  +  
Sbjct: 128 LMKQLGHQLKDMKE---------ELDTP------DLSEEPVNLSDRKSEEHHHEERPTSP 172

Query: 194 KMYESMPSPKSVWRPW 209
                 P+ + VWRPW
Sbjct: 173 PEDNDNPNGEDVWRPW 188


>gi|359952822|gb|AEV91204.1| enhancer of split region protein HLHm3 [Teleopsis dalmanni]
          Length = 222

 Score =  132 bits (333), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 94/124 (75%), Gaps = 4/124 (3%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV+H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVEH 64

Query: 85  LQKMRRQQRLA-SNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           ++K++++  L+   P ++A  + FR+G+   A+++S+ L      D  +G K+M  L  R
Sbjct: 65  MRKLKQRGSLSLQTPNSNAHVESFRSGYVHAADQISQVLVQQRQTD-EIGGKIMKFLSSR 123

Query: 142 LNEM 145
           L EM
Sbjct: 124 LIEM 127


>gi|225709372|gb|ACO10532.1| Enhancer of split mbeta protein [Caligus rogercresseyi]
          Length = 179

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 97/130 (74%), Gaps = 14/130 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE-GENVSKLEKADILELTVQ 83
           +S+T+QYRKVMKP++ERKRRARIN+CLDE+KD+++  LQ+E GE+++KLEKAD+LE+TV+
Sbjct: 15  MSKTHQYRKVMKPLIERKRRARINKCLDEIKDILIETLQSETGESITKLEKADVLEMTVK 74

Query: 84  HLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           HL+ ++ ++          DRF +G+T+CAN VS+ L+ST  ++L     LMSHLG +L 
Sbjct: 75  HLRNLKTKR-------DTPDRFFSGYTSCANHVSQYLSST-EVNLPFARDLMSHLGNQLT 126

Query: 144 EMDKISPLSV 153
                 PLS+
Sbjct: 127 H-----PLSI 131


>gi|359952816|gb|AEV91198.1| enhancer of split region protein HLHmd [Teleopsis dalmanni]
          Length = 189

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/129 (48%), Positives = 92/129 (71%), Gaps = 8/129 (6%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  ++A+GE+V+KLEKADILE+TV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMEAQGEHVTKLEKADILEMTVNY 68

Query: 85  LQ--------KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           L+         +R+   + S    + ++FRAG+T  A EVSK   + PG+D++ GT+LM 
Sbjct: 69  LKTHKHEVARTIRKDTDIVSGNSVNYEKFRAGYTQAAVEVSKIFNTLPGLDVKFGTRLMK 128

Query: 137 HLGQRLNEM 145
           HLG +L ++
Sbjct: 129 HLGYQLKDI 137


>gi|383852904|ref|XP_003701965.1| PREDICTED: enhancer of split mbeta protein-like [Megachile
           rotundata]
          Length = 258

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 89/127 (70%), Gaps = 10/127 (7%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
            P+SRTYQY+K+ KP+LERKRRARIN+CLDELK+LM+ AL+ EGE++SKLEKADILELTV
Sbjct: 8   HPVSRTYQYKKITKPLLERKRRARINKCLDELKNLMIDALETEGEDISKLEKADILELTV 67

Query: 83  QHLQKMRRQQ------RLASNPVTDAD-RFRAGFTTCANEVSKCLASTPGIDLRLGTKLM 135
           +HLQ+++  Q       +A+N    A+ R+ +GF  CA E  + L++ PG       +L 
Sbjct: 68  RHLQRLQGSQPSVLPATMANNAEVSAESRWLSGFGHCAAEAYRFLSALPG---EGAERLA 124

Query: 136 SHLGQRL 142
            HL   L
Sbjct: 125 RHLAAGL 131


>gi|195454099|ref|XP_002074086.1| GK14458 [Drosophila willistoni]
 gi|194170171|gb|EDW85072.1| GK14458 [Drosophila willistoni]
          Length = 223

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 91/132 (68%), Gaps = 13/132 (9%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRL------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K++++  L            AS+     + FR+G+   A+++++ L  T   D  +G 
Sbjct: 65  MRKLKQRGGLSLQGAIINTGSDASSSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIGR 123

Query: 133 KLMSHLGQRLNE 144
           K+M  L  RL E
Sbjct: 124 KIMKFLSTRLIE 135


>gi|198453374|ref|XP_001359173.2| GA21018 [Drosophila pseudoobscura pseudoobscura]
 gi|198132331|gb|EAL28318.2| GA21018 [Drosophila pseudoobscura pseudoobscura]
          Length = 206

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 88/130 (67%), Gaps = 11/130 (8%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LER+RRARIN CLDELKDLMV      G+   K ++ADILE+TV H
Sbjct: 7   VSKTYQYRKVMKPLLERRRRARINMCLDELKDLMVQCTVQSGDG--KFDRADILEVTVDH 64

Query: 85  LQKMRRQQRLASNPVTDA--------DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           L+K+ +Q R+ +                FR GF   A+EVS+ LAS P +D+  GT LM+
Sbjct: 65  LRKL-KQARIEATAAAAKATTNTTPEQSFRDGFIRAADEVSRALASLPNVDVVFGTHLMT 123

Query: 137 HLGQRLNEMD 146
           HLG RLN+++
Sbjct: 124 HLGLRLNQLE 133


>gi|195151943|ref|XP_002016898.1| GL21822 [Drosophila persimilis]
 gi|194111955|gb|EDW33998.1| GL21822 [Drosophila persimilis]
          Length = 207

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 88/130 (67%), Gaps = 11/130 (8%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LER+RRARIN CLDELKDLMV      G+   K ++ADILE+TV H
Sbjct: 7   VSKTYQYRKVMKPLLERRRRARINMCLDELKDLMVQCTVQSGDG--KFDRADILEVTVDH 64

Query: 85  LQKMRRQQRLASNPVTDA--------DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           L+K+ +Q R+ +                FR GF   A+EVS+ LAS P +D+  GT LM+
Sbjct: 65  LRKL-KQARIEATAAAAKATTNTTPEQSFRDGFIRAADEVSRALASLPNVDVVFGTHLMT 123

Query: 137 HLGQRLNEMD 146
           HLG RLN+++
Sbjct: 124 HLGLRLNQLE 133


>gi|195038349|ref|XP_001990622.1| GH19456 [Drosophila grimshawi]
 gi|193894818|gb|EDV93684.1| GH19456 [Drosophila grimshawi]
          Length = 228

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 16/133 (12%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLASNPV---------------TDADRFRAGFTTCANEVSKCLASTPGIDLR 129
           ++K++++  L   PV                + + FR+G+   A+++++ L  T   D  
Sbjct: 65  MRKLKQRGGLTLQPVGGGGGGNTAASSTSAANVESFRSGYVHAADQITQVLLQTQQTD-E 123

Query: 130 LGTKLMSHLGQRL 142
           +G K+M  L  RL
Sbjct: 124 IGRKIMKFLSTRL 136


>gi|194908139|ref|XP_001981713.1| GG11454 [Drosophila erecta]
 gi|190656351|gb|EDV53583.1| GG11454 [Drosophila erecta]
          Length = 226

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 122/228 (53%), Gaps = 49/228 (21%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNEMDKI----------------------SPLSVRVMDVCTPPPSPHSDT 169
            K+M  L  RL E+                         S LS  ++    P  +  + +
Sbjct: 124 RKIMKFLSTRLIELQTQLLQQQQQQQQQHQQQQQIPQSSSRLSFPLLGGYGPAAAAAAIS 183

Query: 170 YSMPLTP--------ASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           YS  LT         +  G++  +T   +SQ    ES  S + VWRPW
Sbjct: 184 YSSFLTSKDELIDVTSVDGNALSETASVSSQ----ESGAS-EPVWRPW 226


>gi|195110341|ref|XP_001999740.1| GI24690 [Drosophila mojavensis]
 gi|193916334|gb|EDW15201.1| GI24690 [Drosophila mojavensis]
          Length = 229

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/137 (48%), Positives = 92/137 (67%), Gaps = 18/137 (13%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLASNPVTDA-----------------DRFRAGFTTCANEVSKCLASTPGID 127
           ++K++++  L  + V +A                 + FR+G+   A+++++ L  T   D
Sbjct: 65  MRKLKQRGGLTLHAVGNAATGGSGVAASSTSAAHVESFRSGYVHAADQITQVLLQTQQTD 124

Query: 128 LRLGTKLMSHLGQRLNE 144
             +G K+M  L  RL E
Sbjct: 125 -EIGRKIMKFLSTRLIE 140


>gi|125776122|ref|XP_001359175.1| GA21008 [Drosophila pseudoobscura pseudoobscura]
 gi|54638917|gb|EAL28319.1| GA21008 [Drosophila pseudoobscura pseudoobscura]
          Length = 219

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 91/132 (68%), Gaps = 13/132 (9%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-SNPVTDA-----------DRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K++++  L+   PV              + FR+G+   A+++++ L  T   D  +G 
Sbjct: 65  MRKLKQRGGLSLQGPVAGGSPPPATSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIGR 123

Query: 133 KLMSHLGQRLNE 144
           K+M  L  RL E
Sbjct: 124 KIMKFLSTRLIE 135


>gi|195151951|ref|XP_002016902.1| GL21819 [Drosophila persimilis]
 gi|194111959|gb|EDW34002.1| GL21819 [Drosophila persimilis]
          Length = 225

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 91/132 (68%), Gaps = 13/132 (9%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-SNPVTDA-----------DRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           ++K++++  L+   PV              + FR+G+   A+++++ L  T   D  +G 
Sbjct: 65  MRKLKQRGGLSLQGPVAGGSPPPATSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIGR 123

Query: 133 KLMSHLGQRLNE 144
           K+M  L  RL E
Sbjct: 124 KIMKFLSTRLIE 135


>gi|195504140|ref|XP_002098953.1| GE23647 [Drosophila yakuba]
 gi|194185054|gb|EDW98665.1| GE23647 [Drosophila yakuba]
          Length = 224

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 14/133 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGVASPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNE 144
            K+M  L  RL E
Sbjct: 124 RKIMKFLSTRLIE 136


>gi|195349613|ref|XP_002041337.1| GM10297 [Drosophila sechellia]
 gi|194123032|gb|EDW45075.1| GM10297 [Drosophila sechellia]
          Length = 221

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 121/223 (54%), Gaps = 44/223 (19%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNEMDKISP-----------------LSVRVMDVCTPPPSPHSDTYSMPL 174
            K+M  L  RL E+                      L+  ++    P  +  + +YS  L
Sbjct: 124 RKIMKFLSTRLIELQTQLLQQQQQHQQQQIPQSSGRLAFPLLGGYGPAAAAAAISYSSFL 183

Query: 175 TP--------ASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           T         +  G++  +T   +SQ    ES  S + VWRPW
Sbjct: 184 TSKDELIDVTSVDGNALSETASVSSQ----ESGAS-EPVWRPW 221


>gi|55715384|gb|AAV59180.1| enhancer of split complex m3 protein [Drosophila melanogaster]
          Length = 224

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 14/133 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGFGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNE 144
            K+M  L  RL E
Sbjct: 124 RKIMKFLSTRLIE 136


>gi|55715461|gb|AAV59251.1| enhancer of split complex m3 protein [Drosophila simulans]
          Length = 227

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 14/133 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNE 144
            K+M  L  RL E
Sbjct: 124 RKIMKFLSTRLIE 136


>gi|55715241|gb|AAV59048.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715254|gb|AAV59060.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715267|gb|AAV59072.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715280|gb|AAV59084.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715293|gb|AAV59096.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715306|gb|AAV59108.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715319|gb|AAV59120.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715345|gb|AAV59144.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715358|gb|AAV59156.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715371|gb|AAV59168.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715397|gb|AAV59192.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715423|gb|AAV59216.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715436|gb|AAV59228.1| enhancer of split complex m3 protein [Drosophila melanogaster]
          Length = 223

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 14/133 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNE 144
            K+M  L  RL E
Sbjct: 124 RKIMKFLSTRLIE 136


>gi|55715449|gb|AAV59240.1| enhancer of split complex m3 protein [Drosophila simulans]
          Length = 225

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 14/133 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNE 144
            K+M  L  RL E
Sbjct: 124 RKIMKFLSTRLIE 136


>gi|24650229|ref|NP_524509.2| enhancer of split m3, helix-loop-helix [Drosophila melanogaster]
 gi|195574063|ref|XP_002105009.1| HLHm3 [Drosophila simulans]
 gi|11132344|sp|Q01068.1|ESM3_DROME RecName: Full=Enhancer of split m3 protein; Short=E(spl)m3;
           AltName: Full=HLH-m3
 gi|158491|gb|AAA28908.1| split locus enhancer protein m3 [Drosophila melanogaster]
 gi|7301424|gb|AAF56550.1| enhancer of split m3, helix-loop-helix [Drosophila melanogaster]
 gi|20151703|gb|AAM11211.1| RE19116p [Drosophila melanogaster]
 gi|55715332|gb|AAV59132.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|55715410|gb|AAV59204.1| enhancer of split complex m3 protein [Drosophila melanogaster]
 gi|194200936|gb|EDX14512.1| HLHm3 [Drosophila simulans]
 gi|220942422|gb|ACL83754.1| HLHm3-PA [synthetic construct]
 gi|220952650|gb|ACL88868.1| HLHm3-PA [synthetic construct]
          Length = 224

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 14/133 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNE 144
            K+M  L  RL E
Sbjct: 124 RKIMKFLSTRLIE 136


>gi|8074|emb|CAA47431.1| helix-loop-helix protein [Drosophila melanogaster]
          Length = 222

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 90/133 (67%), Gaps = 14/133 (10%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLA-------------SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           ++K++++  L+             S      + FR+G+   A+++++ L  T   D  +G
Sbjct: 65  MRKLKQRGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQTD-EIG 123

Query: 132 TKLMSHLGQRLNE 144
            K+M  L  RL E
Sbjct: 124 RKIMKFLSTRLIE 136


>gi|357615019|gb|EHJ69428.1| enhancer of split mbeta-2 [Danaus plexippus]
          Length = 384

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/132 (48%), Positives = 91/132 (68%), Gaps = 13/132 (9%)

Query: 24  PISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQ 83
           P+S+T +Y+K+ KP+LERKRRARINRCLDELKDLM+     + +N+SKLEKADILELTV 
Sbjct: 6   PLSKTAKYKKITKPLLERKRRARINRCLDELKDLMI-----DDDNLSKLEKADILELTVN 60

Query: 84  HLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           HL K+ R +    +PV +A +F+AGF  CA E  + + S P +D ++   L+ HL + + 
Sbjct: 61  HLTKLHRPK----DPVMEAKKFQAGFGQCAAEACRFIMSVPDLDSKVSQNLVGHLSRLIT 116

Query: 144 EMDKISPLSVRV 155
                 PL+++V
Sbjct: 117 SQ----PLTIQV 124


>gi|195389626|ref|XP_002053477.1| GJ23906 [Drosophila virilis]
 gi|194151563|gb|EDW66997.1| GJ23906 [Drosophila virilis]
          Length = 220

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 91/135 (67%), Gaps = 16/135 (11%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLASNPVTDA---------------DRFRAGFTTCANEVSKCLASTPGIDLR 129
           ++K++++  L+   V  A               + FR+G+   A+++++ L  T   D  
Sbjct: 65  MRKLKQRGGLSLQAVGTAGGGNVAAPSTSAAHVESFRSGYVHAADQITQVLLQTQQTD-E 123

Query: 130 LGTKLMSHLGQRLNE 144
           +G K+M  L  RL E
Sbjct: 124 IGRKIMKFLSTRLIE 138


>gi|194743690|ref|XP_001954333.1| GF16799 [Drosophila ananassae]
 gi|190627370|gb|EDV42894.1| GF16799 [Drosophila ananassae]
          Length = 224

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 90/134 (67%), Gaps = 15/134 (11%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V++LEKADILELTV H
Sbjct: 5   MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDH 64

Query: 85  LQKMRRQQRLASNPVTDA--------------DRFRAGFTTCANEVSKCLASTPGIDLRL 130
           ++K++++  L+   V                 + FR+G+   A+++++ L  T   D  +
Sbjct: 65  MRKLKQRGGLSLQGVGSGGGNSPPPATSTAHVESFRSGYVHAADQITQVLLQTQQTD-EI 123

Query: 131 GTKLMSHLGQRLNE 144
           G K+M  L  RL E
Sbjct: 124 GRKIMKFLSTRLIE 137


>gi|380027474|ref|XP_003697448.1| PREDICTED: enhancer of split mbeta protein-like [Apis florea]
          Length = 259

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/128 (48%), Positives = 87/128 (67%), Gaps = 11/128 (8%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
            P+S+TY+Y+K+ KP+LERKRRARIN+CLDELK+LM+ AL+ EGE++SKLEKADILELTV
Sbjct: 8   HPVSKTYRYKKITKPLLERKRRARINKCLDELKNLMIDALETEGEDISKLEKADILELTV 67

Query: 83  QHLQKMRRQQRLASNP--------VTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
           +HLQ+++  +     P        V+  +R+ +GF  CA E  + L++ PG       +L
Sbjct: 68  RHLQRLQSSRSSTGLPDTATKNDEVSAENRWLSGFGHCAAEAYRFLSAVPG---EGAERL 124

Query: 135 MSHLGQRL 142
             HL   L
Sbjct: 125 ARHLAAGL 132


>gi|328778312|ref|XP_003249471.1| PREDICTED: enhancer of split mbeta protein-like [Apis mellifera]
          Length = 257

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/129 (48%), Positives = 87/129 (67%), Gaps = 12/129 (9%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
            P+S+TY+Y+K+ KP+LERKRRARIN+CLDELK+LM+ AL+ EGE++SKLEKADILELTV
Sbjct: 8   HPVSKTYRYKKITKPLLERKRRARINKCLDELKNLMIDALETEGEDISKLEKADILELTV 67

Query: 83  QHLQKMRRQQR---------LASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           +HLQ+++  +            S  V+  +R+ +GF  CA E  + L++ PG       +
Sbjct: 68  RHLQRLQGSRSSTGHLLDTATKSGEVSGENRWLSGFGHCAAEAYRFLSAVPG---EGAER 124

Query: 134 LMSHLGQRL 142
           L  HL   L
Sbjct: 125 LARHLAAGL 133


>gi|195038333|ref|XP_001990614.1| GH19451 [Drosophila grimshawi]
 gi|193894810|gb|EDV93676.1| GH19451 [Drosophila grimshawi]
          Length = 198

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 51/213 (23%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  +  +GE V+KLEKADILELTV +
Sbjct: 9   MTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDEQGEQVNKLEKADILELTVNY 68

Query: 85  LQKMRRQQRL----ASNPVT----------------------DADRFRAGFTTCANEVSK 118
           L K ++QQR+    A  P                        + D+F AG+T  A EVS 
Sbjct: 69  L-KTQQQQRMTGIRAGTPPACSSSSSSSICTPTSPPPPETQLNFDKFHAGYTQAAYEVSH 127

Query: 119 CLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPAS 178
             ++ PG+DL+ GT LM  LG +L +M +          + +P PS              
Sbjct: 128 IFSTVPGLDLKFGTHLMKQLGHQLKDMKQ---------QLSSPVPS-------------E 165

Query: 179 SGSSQVDTCDYTSQYKM--YESMPSPKSVWRPW 209
             +  V+  D   +      E++   + VWRPW
Sbjct: 166 DATEPVNLADVKQRRSTSPQENLDMGEEVWRPW 198


>gi|225713404|gb|ACO12548.1| Enhancer of split mbeta protein [Lepeophtheirus salmonis]
          Length = 176

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 99/154 (64%), Gaps = 13/154 (8%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE-GENVS 70
           MI + +  E    +SRT+QYRKVMKP+LERKRRARIN+ LDE+KDL+   LQA+ GE+++
Sbjct: 1   MIMSLLYSENSNSMSRTHQYRKVMKPLLERKRRARINKSLDEIKDLLKDTLQAQSGESLN 60

Query: 71  KLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRL 130
           KLEKADILE+TV++L       R  +N     D + +G++TC    ++ L+S PG++   
Sbjct: 61  KLEKADILEMTVKYL-------RRPTNQHMSLDSYFSGYSTCTQHTNQYLSSIPGVNTHF 113

Query: 131 GTKLMSHLGQRLNEMDKISPLSVRVM-DVCTPPP 163
            + L+SHL  +L+    I P    V   + TPPP
Sbjct: 114 ASDLLSHLRTQLS----IPPPDALVKPSIKTPPP 143


>gi|241074197|ref|XP_002408713.1| transcription factor hes-1, putative [Ixodes scapularis]
 gi|215492546|gb|EEC02187.1| transcription factor hes-1, putative [Ixodes scapularis]
          Length = 247

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 100/162 (61%), Gaps = 17/162 (10%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+  + R+  KP++E++RRARIN  L ELK+L++ AL+ +    SKLEKADILE+TV+HL
Sbjct: 8   SKASELRRSTKPIMEKRRRARINHSLTELKNLILDALKKDNARHSKLEKADILEMTVKHL 67

Query: 86  QKMRRQQRLASNPVTD---ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           Q+++RQQ  A   VTD   AD+FRAGF  CA EV + L    G++  +  +LM H     
Sbjct: 68  QQLQRQQS-ARAIVTDCSVADKFRAGFRECAAEVGRYLGRMDGLEPAVRQRLMGH----- 121

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV 184
                   L+ RV D+ TPPPSP  +++    +   +GS Q+
Sbjct: 122 --------LASRVTDLSTPPPSPSEESHFFGNSRGGNGSLQL 155


>gi|340724354|ref|XP_003400547.1| PREDICTED: hypothetical protein LOC100648487 [Bombus terrestris]
          Length = 259

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 10/127 (7%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
            P+S+TY+Y+K+ KP+LERKRRARIN+CLDELK+LM+  L+ EGE++SKLEKADILELTV
Sbjct: 8   HPVSKTYRYKKITKPLLERKRRARINKCLDELKNLMIDTLETEGEDISKLEKADILELTV 67

Query: 83  QHLQKMRRQQR------LASNPVTDAD-RFRAGFTTCANEVSKCLASTPGIDLRLGTKLM 135
           +HLQ+++  +       +  N    A+ R+ +GF  CA E  + L++ PG       +L 
Sbjct: 68  RHLQRLQGSRSSGLSGTITKNEEASAESRWLSGFGHCAAEAYRFLSAVPG---EGAERLA 124

Query: 136 SHLGQRL 142
            HL   L
Sbjct: 125 RHLAAGL 131


>gi|350397762|ref|XP_003484984.1| PREDICTED: hypothetical protein LOC100741769 [Bombus impatiens]
          Length = 259

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 10/127 (7%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
            P+S+TY+Y+K+ KP+LERKRRARIN+CLDELK+LM+  L+ EGE++SKLEKADILELTV
Sbjct: 8   HPVSKTYRYKKITKPLLERKRRARINKCLDELKNLMIDTLETEGEDISKLEKADILELTV 67

Query: 83  QHLQKMRRQQR------LASNPVTDAD-RFRAGFTTCANEVSKCLASTPGIDLRLGTKLM 135
           +HLQ+++  +       +  N    A+ R+ +GF  CA E  + L++ PG       +L 
Sbjct: 68  RHLQRLQGSRSSGLSGTITKNEEASAESRWLSGFGHCAAEAYRFLSAVPG---EGAERLA 124

Query: 136 SHLGQRL 142
            HL   L
Sbjct: 125 RHLAAGL 131


>gi|7228083|emb|CAB77018.1| HLHmdelta protein [Drosophila hydei]
          Length = 158

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 39/193 (20%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           +E  + +++T  YRKV KP+LERKRRAR+N  LDELKDL+V  + A+GE VSKLEKADIL
Sbjct: 3   VEGQRFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADIL 62

Query: 79  ELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           ELTV +L+  ++Q+R                T  A EVS   ++ PG+DL+ GT LM  L
Sbjct: 63  ELTVNYLKTQQQQRRY---------------TQAAYEVSHIFSTVPGVDLKFGTHLMKQL 107

Query: 139 GQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPA--SSGSSQVDTCDYTSQYKMY 196
           G +L +M +          + +P PS H+      + P   ++G+ Q+            
Sbjct: 108 GHQLKDMKQ---------QLSSPVPSEHA------IEPVNLANGNEQLSLSP-------Q 145

Query: 197 ESMPSPKSVWRPW 209
           E++   + VWRPW
Sbjct: 146 ENLDKGEDVWRPW 158


>gi|307189637|gb|EFN73975.1| Enhancer of split mgamma protein [Camponotus floridanus]
          Length = 265

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 10/117 (8%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           ++ KP+LERKRRARINRCLDELKDLMV ALQ EGEN+SKLEKADILELTV+HLQK++  +
Sbjct: 6   QITKPLLERKRRARINRCLDELKDLMVDALQTEGENISKLEKADILELTVRHLQKLQASR 65

Query: 93  ------RLASNPVTDAD-RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
                  LAS+    A+ R+++GF  CA E  + L+S PG       +L  HL   L
Sbjct: 66  PTGLSTSLASDDEISAESRWQSGFGHCAAEACRFLSSLPG---ETAERLARHLAAGL 119


>gi|321455726|gb|EFX66851.1| hypothetical protein DAPPUDRAFT_64307 [Daphnia pulex]
          Length = 128

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 81/128 (63%), Gaps = 23/128 (17%)

Query: 34  VMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQR 93
           + KP+LER+RRARINRCLDELK+LM  AL AEGEN++KLEKAD+LELTV+HL ++ R+  
Sbjct: 1   ITKPLLERQRRARINRCLDELKELMSAALAAEGENLTKLEKADVLELTVRHLHQLHREGE 60

Query: 94  LASNPV-----------------------TDADRFRAGFTTCANEVSKCLASTPGIDLRL 130
           L+ N V                        D  R++ GF  CA +V+  +  TPG++  L
Sbjct: 61  LSLNAVGGGGGGIFNRPPSAAAAAVAAAPADRRRYQGGFIACAQQVASYVMKTPGLEPGL 120

Query: 131 GTKLMSHL 138
           G +L++HL
Sbjct: 121 GQRLLAHL 128


>gi|208972121|gb|ACI32659.1| Hairy protein [Periplaneta americana]
          Length = 410

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 13/159 (8%)

Query: 18  DIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
           D   L P  RT + R+  KP++E++RRARIN CL+EL+ L++ A++ +    SKLEKADI
Sbjct: 37  DSAGLPPQRRTNENRRSNKPIMEKRRRARINNCLNELRTLILDAMKKDPARHSKLEKADI 96

Query: 78  LELTVQHLQKMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
           LE+TV+HL+ ++RQQ +A +  TD    ++FRAGFT CA EV +     PG++  +  +L
Sbjct: 97  LEMTVKHLENLQRQQ-VAMSAATDPSVLNKFRAGFTECAGEVGRF----PGLESPVRKRL 151

Query: 135 MSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMP 173
           + HL   LN     +P    V     P PSP   + + P
Sbjct: 152 LQHLANCLNGTTTAAPSGTGV-----PQPSPQDSSPAPP 185


>gi|340723279|ref|XP_003400019.1| PREDICTED: hypothetical protein LOC100643707 [Bombus terrestris]
          Length = 455

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 91/132 (68%), Gaps = 4/132 (3%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP     + R+  KP++E++RRARIN+CLDELK L++ A++ +    SKLEKADILE+TV
Sbjct: 21  QPGMTKAELRRSNKPIMEKRRRARINQCLDELKSLILEAMKKDPTRHSKLEKADILEMTV 80

Query: 83  QHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           +HLQ ++RQQ    +A++PV    +FR+GF+ CA EVS+ ++    +D  +  +L+SHL 
Sbjct: 81  KHLQAVQRQQLSTAVATDPVV-LTKFRSGFSECATEVSRYVSHLENVDPVVKQRLVSHLN 139

Query: 140 QRLNEMDKISPL 151
             ++ + +++P 
Sbjct: 140 NCVSNLQQMAPF 151


>gi|350409280|ref|XP_003488679.1| PREDICTED: hypothetical protein LOC100742057 [Bombus impatiens]
          Length = 457

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 91/132 (68%), Gaps = 4/132 (3%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP     + R+  KP++E++RRARIN+CLDELK L++ A++ +    SKLEKADILE+TV
Sbjct: 21  QPGMTKAELRRSNKPIMEKRRRARINQCLDELKSLILEAMKKDPTRHSKLEKADILEMTV 80

Query: 83  QHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           +HLQ ++RQQ    +A++PV    +FR+GF+ CA EVS+ ++    +D  +  +L+SHL 
Sbjct: 81  KHLQAVQRQQLSTAVATDPVV-LTKFRSGFSECATEVSRYVSHLENVDPVVKQRLVSHLN 139

Query: 140 QRLNEMDKISPL 151
             ++ + +++P 
Sbjct: 140 NCVSNLQQMAPF 151


>gi|170037964|ref|XP_001846824.1| hairy [Culex quinquefasciatus]
 gi|167881356|gb|EDS44739.1| hairy [Culex quinquefasciatus]
          Length = 345

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 99/162 (61%), Gaps = 12/162 (7%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP+ R    R+  KP++E++RRARIN CL++LK L++ A++ +    SKLEKADILE+TV
Sbjct: 26  QPVKRASDNRRSNKPIMEKRRRARINNCLNDLKTLILDAMKKDPARHSKLEKADILEMTV 85

Query: 83  QHLQKMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           +HL+ ++RQQ   S   TD    ++F+AGF+ CA EV++     P ID     +L++HL 
Sbjct: 86  KHLENLQRQQTAMSQ-ATDPNVMNKFKAGFSECAQEVNRF----PDIDPVTRRRLLAHLS 140

Query: 140 QRL----NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPA 177
             +    NEM K    +V+V  + +PP SP  D  S    PA
Sbjct: 141 NCINGVKNEMPKPRQSAVQVHILPSPPSSPEQDHNSQVPHPA 182


>gi|328784100|ref|XP_001120814.2| PREDICTED: hypothetical protein LOC724914 [Apis mellifera]
          Length = 454

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 90/132 (68%), Gaps = 4/132 (3%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           QP     + R+  KP++E++RRARIN+CLDELK L++ A++ +    SKLEKADILE+TV
Sbjct: 21  QPGMTKAELRRSNKPIMEKRRRARINQCLDELKSLILEAMKKDPARHSKLEKADILEMTV 80

Query: 83  QHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           +HLQ ++RQQ    +A++P     +FR+GF+ CA EVS+ ++    +D  +  +L+SHL 
Sbjct: 81  KHLQAVQRQQLSTAVATDPAV-LTKFRSGFSECATEVSRYVSHLENVDPVVKQRLVSHLN 139

Query: 140 QRLNEMDKISPL 151
             ++ + +++P 
Sbjct: 140 NCVSNLQQMAPF 151


>gi|37590864|gb|AAH59551.1| Her6 protein [Danio rerio]
          Length = 270

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 110/193 (56%), Gaps = 28/193 (14%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ M+
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNMQ 92

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P T   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALNTDP-TVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQIN 151

Query: 147 KIS-PLSVRVMDVCTPPPSPHSDTYSMPL-----------------TPASSGSSQVDTCD 188
            ++ P   ++      P  P   ++S P+                  P  SGSS   T D
Sbjct: 152 AMNYPTQHQI------PAGPPHPSFSQPMVQIPSATQQANVVPLSGVPCKSGSSSNLTSD 205

Query: 189 YTSQYKMYESMPS 201
            T  Y  ++ +P+
Sbjct: 206 ATKVYGGFQLVPA 218


>gi|443721524|gb|ELU10815.1| hypothetical protein CAPTEDRAFT_156236 [Capitella teleta]
          Length = 198

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 109/194 (56%), Gaps = 26/194 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++ERKRR RIN  L++LK L++ AL  +    SK+EKADILE+TV+HL+ ++RQ
Sbjct: 15  RKIKKPIIERKRRERINDSLNQLKALVLDALNKDESRYSKMEKADILEMTVRHLKVVQRQ 74

Query: 92  QRLASNPVTDA--------DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL- 142
              AS+P   +         ++RAG+  CA EVS+ +AS  G+D    ++L+ HL Q+L 
Sbjct: 75  AAAASSPRESSAFSGSELVSKYRAGYHECATEVSRYMASMRGVDTDTQSRLLRHLSQKLQ 134

Query: 143 ---NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYK----M 195
              +E    SP +     + T P        +M L  A S S  +     +S+      +
Sbjct: 135 TNPSEQQLPSPTAT---SISTLP------GVNMSLNSAMSPSGVIAVVAPSSEMSNGSLL 185

Query: 196 YESMPSPKSVWRPW 209
            +++P  KSVWRPW
Sbjct: 186 RDAIP-LKSVWRPW 198


>gi|18858799|ref|NP_571154.1| transcription factor HES-1 [Danio rerio]
 gi|1279398|emb|CAA65998.1| HER-6 protein [Danio rerio]
          Length = 334

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 112/187 (59%), Gaps = 16/187 (8%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ M+
Sbjct: 97  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNMQ 156

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P T   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 157 RAQMTAALNTDP-TVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQIN 215

Query: 147 KIS-PLSVRVM-DVCTPP--------PSPHSDTYSMPLT--PASSGSSQVDTCDYTSQYK 194
            ++ P   +++  +   P        PS       +PL+  P  SGSS   T D T  Y 
Sbjct: 216 AMNYPTQHQILPGLLIHPSVNPWFKIPSATQQANVVPLSGVPCKSGSSSNLTSDATKVYG 275

Query: 195 MYESMPS 201
            ++ +P+
Sbjct: 276 GFQLVPA 282


>gi|225717694|gb|ACO14693.1| Enhancer of split m7 protein [Caligus clemensi]
          Length = 175

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 92/144 (63%), Gaps = 6/144 (4%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEG---ENVSKLEKADILELTV 82
           SRT+QYRKVMKP+LERKRRARIN+ LDE+KDL+   L AE     +++KLEKADILELTV
Sbjct: 13  SRTHQYRKVMKPLLERKRRARINKSLDEIKDLLRDTLAAESGGDSSLNKLEKADILELTV 72

Query: 83  QHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           +HL+++   +          D + +G++ CA   S+ L S PG   +  + L+SHL  +L
Sbjct: 73  KHLREIVPPKAPPQQSPFLLDPYISGYSACATHTSQFLHSLPG-QTQFTSDLLSHLSTQL 131

Query: 143 NEMDKI-SPLSVRVMDVC-TPPPS 164
             + ++ SP+      V  +PPPS
Sbjct: 132 RPLCQVQSPMPPAPQKVQRSPPPS 155


>gi|383855334|ref|XP_003703169.1| PREDICTED: uncharacterized protein LOC100876689 [Megachile
           rotundata]
          Length = 451

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 88/125 (70%), Gaps = 4/125 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + R+  KP++E++RRARIN+CLDELK L++ A++ +    SKLEKADILE+TV+HLQ ++
Sbjct: 28  ELRRSNKPIMEKRRRARINQCLDELKSLILEAMKKDPTRHSKLEKADILEMTVKHLQAVQ 87

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    +A++P     +FR+GF+ CA EVS+ ++    +D  +  +L+SHL   ++ + 
Sbjct: 88  RQQLSTAVATDPAV-LTKFRSGFSECATEVSRYVSHLENVDPVVKQRLVSHLNNCVSNLQ 146

Query: 147 KISPL 151
           +++P 
Sbjct: 147 QMAPF 151


>gi|383855344|ref|XP_003703174.1| PREDICTED: protein hairy-like [Megachile rotundata]
          Length = 359

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/123 (45%), Positives = 85/123 (69%), Gaps = 8/123 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN CL++LK L++ A++ +    SKLEKADILE+TV+HL+
Sbjct: 45  RSGENRRSNKPIMEKRRRARINNCLNDLKTLILDAMKKDPARHSKLEKADILEMTVKHLE 104

Query: 87  KMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ     A++P T  ++FRAGFT CA EV +     PG+D  +  +LM+HL   L 
Sbjct: 105 TLQRQQVALAAATDP-TVLNKFRAGFTECAGEVGRF----PGLDASVKRRLMAHLASCLG 159

Query: 144 EMD 146
            +D
Sbjct: 160 PVD 162


>gi|157110092|ref|XP_001650948.1| hairy protein [Aedes aegypti]
 gi|157130964|ref|XP_001662100.1| hairy protein [Aedes aegypti]
 gi|108871710|gb|EAT35935.1| AAEL011943-PA [Aedes aegypti]
 gi|108878802|gb|EAT43027.1| AAEL005480-PA [Aedes aegypti]
          Length = 343

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 99/172 (57%), Gaps = 13/172 (7%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           + R    R+  KP++E++RRARIN CL+ELK L++ A++ +    SKLEKADILE+TV+H
Sbjct: 29  VKRPSDNRRSNKPIMEKRRRARINNCLNELKTLILDAMKKDPARHSKLEKADILEMTVKH 88

Query: 85  LQKMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           L+ ++RQQ   S   TD    ++F+AGF  CA EVS+     P ID     +L++HL   
Sbjct: 89  LENLQRQQNAMSQ-ATDPNVMNKFKAGFNECAQEVSRF----PDIDPMTRRRLLAHLSNC 143

Query: 142 LNEMDKISPLS----VRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDY 189
           +N +    P S    V+V  + +PP SP  D +  P  PA   + Q     Y
Sbjct: 144 INGVKSDLPKSRQSAVQVHILPSPPSSPEQDHHPQP-HPAQINAVQTGNGVY 194


>gi|195332406|ref|XP_002032889.1| GM20707 [Drosophila sechellia]
 gi|194124859|gb|EDW46902.1| GM20707 [Drosophila sechellia]
          Length = 435

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + S+P     +F+ GF  CA EV++ ++   GID  +  +L +HL Q  N ++
Sbjct: 99  RQQLNMAIQSDPSV-VQKFKTGFVECAEEVNRYVSQMDGIDTGVRQRLSAHLNQCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|195474645|ref|XP_002089601.1| GE23198 [Drosophila yakuba]
 gi|194175702|gb|EDW89313.1| GE23198 [Drosophila yakuba]
          Length = 435

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + S+P     +F+ GF  CA EV++ ++   GID  +  +L +HL Q  N ++
Sbjct: 99  RQQLNMAIQSDPSV-VQKFKTGFVECAEEVNRYVSQMDGIDTGVRQRLSAHLNQCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|194863545|ref|XP_001970493.1| GG10662 [Drosophila erecta]
 gi|190662360|gb|EDV59552.1| GG10662 [Drosophila erecta]
          Length = 435

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + S+P     +F+ GF  CA EV++ ++   GID  +  +L +HL Q  N ++
Sbjct: 99  RQQLNMAIQSDPSV-VQKFKTGFVECAEEVNRYVSQMDGIDTGVRQRLSAHLNQCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|17136808|ref|NP_476923.1| deadpan [Drosophila melanogaster]
 gi|17380360|sp|Q26263.2|DPN_DROME RecName: Full=Protein deadpan
 gi|7304075|gb|AAF59113.1| deadpan [Drosophila melanogaster]
 gi|17945810|gb|AAL48952.1| RE34993p [Drosophila melanogaster]
 gi|220942546|gb|ACL83816.1| dpn-PA [synthetic construct]
 gi|220952694|gb|ACL88890.1| dpn-PA [synthetic construct]
          Length = 435

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + S+P     +F+ GF  CA EV++ ++   GID  +  +L +HL Q  N ++
Sbjct: 99  RQQLNMAIQSDPSV-VQKFKTGFVECAEEVNRYVSQMDGIDTGVRQRLSAHLNQCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|307212049|gb|EFN87932.1| Enhancer of split mgamma protein [Harpegnathos saltator]
          Length = 291

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/115 (51%), Positives = 79/115 (68%), Gaps = 8/115 (6%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR--R 90
           K+ KP+LERKRRARINRCLDELK++MV AL+ E EN+SKLEKADILELTV+HLQ+++  R
Sbjct: 28  KITKPLLERKRRARINRCLDELKNIMVDALETERENISKLEKADILELTVRHLQRLQAAR 87

Query: 91  QQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
              LA+   + ++  +R++ GF  CA E  + L+S  G       +L  HL   L
Sbjct: 88  PSGLATAGDDGISAENRWQRGFGHCAAEACRFLSSLSG---EAAGRLARHLASGL 139


>gi|157278365|ref|NP_001098284.1| Her6.2 [Oryzias latipes]
 gi|66393606|gb|AAY45952.1| Her6.2 [Oryzias latipes]
          Length = 231

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 57/229 (24%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +  + + RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+H
Sbjct: 16  VRASSESRKSSKPIMEKRRRARINESLAQLKSLILDALKKDSCRHSKLEKADILEMTVKH 75

Query: 85  LQKMRRQQRLASNPVTDAD-----RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           L+ +   QRL  +    +D     ++RAGF+ C  EV++ L+S  G++    T+L+SHL 
Sbjct: 76  LRNL---QRLHVSAAVHSDPSVLSKYRAGFSECVGEVTRFLSSYEGVNSEARTRLLSHLA 132

Query: 140 QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTC-------DYTSQ 192
             +++        +  ++VC   P P +   S  L PA+SG     +C       D  + 
Sbjct: 133 SCVSQ--------IHTVNVCG--PHPGAPGQSAALLPAASGPQTTKSCSQMPASTDTITL 182

Query: 193 YKMYESMPSP--------------------------------KSVWRPW 209
           +  ++ +PSP                                 SVWRPW
Sbjct: 183 FAGFQVVPSPDGQFSLLVPSAGLTPLGMHSGGAPAAAPALTSDSVWRPW 231


>gi|423828|pir||A46231 helix-loop-helix protein Dpn - fruit fly (Drosophila sp.)
 gi|259772|gb|AAB24149.1| Dpn [Drosophila sp.]
          Length = 435

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + S+P     +F+ GF  CA EV++ ++   GID  +  +L +HL Q  N ++
Sbjct: 99  RQQLNMAIQSDPSV-VQKFKTGFVECAEEVNRYVSQMDGIDTGVRQRLSAHLNQCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|195551484|ref|XP_002076238.1| GD15288 [Drosophila simulans]
 gi|194201887|gb|EDX15463.1| GD15288 [Drosophila simulans]
          Length = 435

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 85/126 (67%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + S+P     +F+ GF  CA EV++ ++   GID  +  +L +HL Q  N ++
Sbjct: 99  RQQLNMAIQSDPGV-VQKFKTGFVECAEEVNRYVSQMDGIDTGVRQRLSAHLNQCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|340723283|ref|XP_003400021.1| PREDICTED: protein hairy-like [Bombus terrestris]
          Length = 360

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 8/123 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN CL++LK L++ A++ +    SKLEKADILE+TV+HL+
Sbjct: 45  RSGENRRSNKPIMEKRRRARINNCLNDLKTLILDAMKKDPSRHSKLEKADILEMTVKHLE 104

Query: 87  KMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ +A    TD    ++FRAGFT CA EV +     PG+D  +  +LM+HL   L 
Sbjct: 105 SLQRQQ-VALAAATDPNVLNKFRAGFTECAGEVGRF----PGLDASVKRRLMAHLATYLG 159

Query: 144 EMD 146
            ++
Sbjct: 160 PVE 162


>gi|350409268|ref|XP_003488675.1| PREDICTED: protein hairy-like [Bombus impatiens]
          Length = 360

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 8/123 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN CL++LK L++ A++ +    SKLEKADILE+TV+HL+
Sbjct: 45  RSGENRRSNKPIMEKRRRARINNCLNDLKTLILDAMKKDPSRHSKLEKADILEMTVKHLE 104

Query: 87  KMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ +A    TD    ++FRAGFT CA EV +     PG+D  +  +LM+HL   L 
Sbjct: 105 SLQRQQ-VALAAATDPNVLNKFRAGFTECAGEVGRF----PGLDASVKRRLMAHLATYLG 159

Query: 144 EMD 146
            ++
Sbjct: 160 PVE 162


>gi|221222258|gb|ACM09790.1| Transcription factor HES-1 [Salmo salar]
          Length = 278

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 110/185 (59%), Gaps = 15/185 (8%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 44  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 103

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P T   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 104 RAQMTAALNTDP-TVLGKYRAGFSECTNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQIN 162

Query: 147 KISPLSVRVMDVCTPPPS--------PHSDTYS--MPLTPASSGSSQVDTCDYTSQYKMY 196
            ++  +   +    P PS        P+S      MPL P   GS Q  + + T  Y  +
Sbjct: 163 AMNYPTQHQISAGPPHPSFGQSMVQMPNSSPQGNVMPL-PCKGGSPQSMSPEATKVYGGF 221

Query: 197 ESMPS 201
           + +P+
Sbjct: 222 QLVPA 226


>gi|38194213|dbj|BAD01491.1| hairy [Achaearanea tepidariorum]
          Length = 264

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 84/122 (68%), Gaps = 2/122 (1%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           ++++ + R+  KP++E++RRARIN  L ELK+L++ AL+ +    SKLEKADILE+TV+H
Sbjct: 7   VTKSSETRRSTKPIMEKRRRARINNSLTELKNLILDALKKDNARHSKLEKADILEMTVKH 66

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           LQ ++ QQ +  +P   A +FRAGF  CANEV++ +    G+D  +  +LM+HL   L  
Sbjct: 67  LQNLQMQQ-MNPDPAMIA-KFRAGFAECANEVNRFMGRIDGVDHTIRQRLMNHLANCLTG 124

Query: 145 MD 146
           M+
Sbjct: 125 MN 126


>gi|301776745|ref|XP_002923794.1| PREDICTED: transcription factor HES-1-like [Ailuropoda melanoleuca]
          Length = 213

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 23/191 (12%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPK--- 203
            +           T P  PH   + +P    +     +      S   +  +  SP    
Sbjct: 152 AM-----------TYPGQPHPFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSSGP 200

Query: 204 -----SVWRPW 209
                S+WRPW
Sbjct: 201 SLTADSMWRPW 211


>gi|405957167|gb|EKC23398.1| Transcription factor HES-1-B [Crassostrea gigas]
          Length = 404

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 79/113 (69%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S T   RK +KP++ERKRRARIN  L ELK L++  ++AEG   +KLEKADILE+TV+HL
Sbjct: 47  STTSPNRKSLKPVMERKRRARINASLAELKSLLIEVIKAEGTRQNKLEKADILEMTVRHL 106

Query: 86  QKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           + + + +      V+  +++R GF+ CA++VS+ L +T G++    ++L++HL
Sbjct: 107 KTVHKNKTTDGKEVSRINKYRLGFSECASKVSQYLENTDGVETDFRSRLLNHL 159


>gi|209736018|gb|ACI68878.1| Transcription factor HES-1 [Salmo salar]
          Length = 271

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLA-SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q  A S   T   ++RAGF  C NEV++ L+++ G++  + ++L++HL   L +M
Sbjct: 93  RVQMTALSADTTVLSKYRAGFNECMNEVTRFLSTSEGVNTEVKSRLLNHLSGSLGQM 149


>gi|242004766|ref|XP_002423249.1| transcription factor hes-1, putative [Pediculus humanus corporis]
 gi|212506235|gb|EEB10511.1| transcription factor hes-1, putative [Pediculus humanus corporis]
          Length = 615

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 56/123 (45%), Positives = 83/123 (67%), Gaps = 4/123 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN CL+ELK L++ A++ +    SKLEKADILE+TV+HLQ+++RQ
Sbjct: 29  RKSNKPIMEKRRRARINHCLNELKTLILDAMKKDPARHSKLEKADILEMTVKHLQQIQRQ 88

Query: 92  QRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
           Q LAS    D     RF+ GF  CA EVS+ ++   G+D  +  +L +HL + ++ +  I
Sbjct: 89  Q-LASAVAADPGVIMRFKNGFDECAAEVSRYISRLDGVDNGVKQRLTAHLHRCVSSIQHI 147

Query: 149 SPL 151
           S  
Sbjct: 148 STF 150


>gi|156550861|ref|XP_001601817.1| PREDICTED: protein hairy-like [Nasonia vitripennis]
 gi|451936070|gb|AGF87125.1| hairy [Nasonia vitripennis]
          Length = 376

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 85/123 (69%), Gaps = 8/123 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN CL++LK L++ A++ +    SKLEKADILE+TV+HL+
Sbjct: 52  RSSENRRSNKPIMEKRRRARINNCLNDLKALILDAMKKDPARHSKLEKADILEMTVKHLE 111

Query: 87  KMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ +A    TD    ++FRAGFT CANEV +     PG++  +  +L++HL   L+
Sbjct: 112 TLQRQQ-VALASATDPNVLNKFRAGFTECANEVGRF----PGLEASMKRRLLAHLSTCLS 166

Query: 144 EMD 146
             D
Sbjct: 167 NAD 169


>gi|1017761|gb|AAA79185.1| hairy1 [Xenopus laevis]
          Length = 266

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 94/138 (68%), Gaps = 4/138 (2%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   +N+++
Sbjct: 93  RVQMSAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTDVRTRLLGHLANCMNQIN 151

Query: 147 KISPLSVRVMDVCTPPPS 164
            ++ L  ++     P P+
Sbjct: 152 GMNYLPAQMPSAAAPHPA 169


>gi|270014144|gb|EFA10592.1| hypothetical protein TcasGA2_TC012851 [Tribolium castaneum]
          Length = 249

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 10/158 (6%)

Query: 5   IHENQINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQA 64
           +  N I   NN   IE      R    R+  KP++E++RRARIN  L+ELK L++ A++ 
Sbjct: 10  VQPNAIPTTNN--QIEMAAATKRVSDNRRSNKPIMEKRRRARINNSLNELKTLILDAMKK 67

Query: 65  EGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTD---ADRFRAGFTTCANEVSKCLA 121
           +    SKLEKADILE+TV+HLQ ++RQQ  A +  TD     +FRAGF+ CA+EV +   
Sbjct: 68  DPARHSKLEKADILEMTVKHLQNLQRQQ-AAMSAATDPSVVSKFRAGFSECASEVGRF-- 124

Query: 122 STPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVC 159
             PG+D  +  +L+ HL   LN+  K   + V V +V 
Sbjct: 125 --PGLDPVVKRRLLQHLASCLNQGQKEPQVQVIVPEVA 160


>gi|209733088|gb|ACI67413.1| Transcription factor HES-1 [Salmo salar]
          Length = 290

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 82/118 (69%), Gaps = 2/118 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLA--SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q  A  S   T   ++RAGF  C NEV++ L+++ G++  + ++L++HL   L +M
Sbjct: 93  RVQMTAALSADTTVLSKYRAGFNECMNEVTRFLSTSEGVNTEVKSRLLNHLSGSLGQM 150


>gi|166796106|ref|NP_001107765.1| hairy [Tribolium castaneum]
 gi|20269075|emb|CAD29886.1| helix-loop-helix transcription factor [Tribolium castaneum]
          Length = 249

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 10/158 (6%)

Query: 5   IHENQINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQA 64
           +  N I   NN   IE      R    R+  KP++E++RRARIN  L+ELK L++ A++ 
Sbjct: 10  VQPNAIPTTNN--QIEMAAATKRVSDNRRSNKPIMEKRRRARINNSLNELKTLILDAMKK 67

Query: 65  EGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTD---ADRFRAGFTTCANEVSKCLA 121
           +    SKLEKADILE+TV+HLQ ++RQQ  A +  TD     +FRAGF+ CA+EV +   
Sbjct: 68  DPARHSKLEKADILEMTVKHLQNLQRQQ-AAMSAATDPSVVSKFRAGFSECASEVGRF-- 124

Query: 122 STPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVC 159
             PG+D  +  +L+ HL   LN+  K   + V V +V 
Sbjct: 125 --PGLDPVVKRRLLQHLASCLNQGQKEPQVQVIVPEVA 160


>gi|380021280|ref|XP_003694498.1| PREDICTED: protein hairy-like [Apis florea]
          Length = 362

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 8/123 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN CL++LK L++ A++ +    SKLEKADILE+TV+HL+
Sbjct: 45  RSGENRRSNKPIMEKRRRARINNCLNDLKTLILDAMKKDPARHSKLEKADILEMTVKHLE 104

Query: 87  KMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ +A    TD    ++FRAGFT CA EV +     PG+D  +  +LM+HL   L 
Sbjct: 105 TLQRQQ-VALAAATDPNVLNKFRAGFTECAGEVGRF----PGLDASVKRRLMAHLASCLG 159

Query: 144 EMD 146
            ++
Sbjct: 160 PVE 162


>gi|110762302|ref|XP_393948.3| PREDICTED: protein hairy [Apis mellifera]
          Length = 363

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 8/123 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN CL++LK L++ A++ +    SKLEKADILE+TV+HL+
Sbjct: 45  RSGENRRSNKPIMEKRRRARINNCLNDLKTLILDAMKKDPARHSKLEKADILEMTVKHLE 104

Query: 87  KMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ +A    TD    ++FRAGFT CA EV +     PG+D  +  +LM+HL   L 
Sbjct: 105 TLQRQQ-VALAAATDPNVLNKFRAGFTECAGEVGRF----PGLDASVKRRLMAHLASCLG 159

Query: 144 EMD 146
            ++
Sbjct: 160 PVE 162


>gi|410899364|ref|XP_003963167.1| PREDICTED: transcription factor HES-4-B-like [Takifugu rubripes]
          Length = 288

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 83/118 (70%), Gaps = 2/118 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLA--SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q  A  S  VT   ++RAGF  C NEV++ L+++ G++  + ++L+SHL   + +M
Sbjct: 93  RVQMSAALSADVTVLSKYRAGFNECMNEVTRFLSTSEGVNTEVRSRLLSHLSSCMGQM 150


>gi|281350398|gb|EFB25982.1| hypothetical protein PANDA_012998 [Ailuropoda melanoleuca]
          Length = 215

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 107/193 (55%), Gaps = 25/193 (12%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMY--------ES 198
            +           T P  PH   ++  +   +   S      YTS              S
Sbjct: 152 AM-----------TYPGQPHPALFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPSS 200

Query: 199 MPS--PKSVWRPW 209
            PS    S+WRPW
Sbjct: 201 GPSLTADSMWRPW 213


>gi|195431349|ref|XP_002063705.1| GK15770 [Drosophila willistoni]
 gi|194159790|gb|EDW74691.1| GK15770 [Drosophila willistoni]
          Length = 465

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 85/126 (67%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + ++P     +F+ GF  CA EV++ ++   GID+ +  +L +HL    N ++
Sbjct: 99  RQQLNMAIQTDPSV-VQKFKTGFVECAEEVNRYVSQLDGIDVGVRQRLSAHLNNCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|427786889|gb|JAA58896.1| Putative transcriptional repressors of the hairy/espl family
           [Rhipicephalus pulchellus]
          Length = 261

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 100/162 (61%), Gaps = 18/162 (11%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+  + R+  KP++E++RRARIN  L ELK+L++ AL+ +    SKLEKADILE+TV+HL
Sbjct: 8   SKASELRRSTKPIMEKRRRARINHSLTELKNLILDALKKDNARHSKLEKADILEMTVKHL 67

Query: 86  QKMRRQQRLASNPVTD---ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           Q+++RQQ   S  V+D   AD+FRAG+  CA EV + L    G+D  +  ++M HL  R+
Sbjct: 68  QQLQRQQAARSI-VSDSSVADKFRAGYRECAAEVGRYLGRLDGVDGAVRQRVMGHLASRV 126

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV 184
           +E+              TPPPSP S+        AS+GS Q+
Sbjct: 127 SEL-------------STPPPSPGSEDGGHFFN-ASAGSVQL 154


>gi|359952824|gb|AEV91206.1| enhancer of split region protein HLHm5a [Teleopsis dalmanni]
          Length = 177

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 31/197 (15%)

Query: 21  QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILEL 80
           +++ IS+T  Y KV KP+LER+RRAR+N+CLD LK L V  LQ++ + + +++KA++LE 
Sbjct: 4   KVEYISKTQHYLKVKKPLLERQRRARMNKCLDALKTL-VAELQSD-DAILRMDKAEMLET 61

Query: 81  TVQHL--QKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           T+ ++  Q + + +   ++P  D+  F  G+    NEVS+ +A+TPG+ + LG  +MSHL
Sbjct: 62  TIVYMRSQAVCKLKTAWTSPPMDS--FCNGYMNAVNEVSRVMAATPGMSVELGKSVMSHL 119

Query: 139 GQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSM------PLTPASSGSSQVDTCDYTSQ 192
           G   N          R++   T     H DT S       P++PASSG      CD +S 
Sbjct: 120 GVEFN----------RLLQHKT--QQQHQDTLSTKSHFPRPVSPASSGYH--SDCDESSM 165

Query: 193 YKMYESMPSPKSVWRPW 209
                + P   +VWRPW
Sbjct: 166 -----ATPVLSTVWRPW 177


>gi|189212387|gb|ACD84803.1| HES2 [Capitella teleta]
          Length = 290

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 87/136 (63%), Gaps = 9/136 (6%)

Query: 15  NTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEK 74
           NT+  E+   IS     RK+ KP++ERKRR RIN  L++LK L++ AL  +    SK+EK
Sbjct: 11  NTMSTEKAPSIS-AQALRKIKKPIIERKRRERINDSLNQLKALVLDALNKDESRYSKMEK 69

Query: 75  ADILELTVQHLQKMRRQQRLASNPVTDA--------DRFRAGFTTCANEVSKCLASTPGI 126
           ADILE+TV+HL+ ++RQ   A++P   +        +++RAG+  CA EVS+ +AS  G+
Sbjct: 70  ADILEMTVRHLKVVQRQAAAATSPRESSAFSGSELVNKYRAGYHECATEVSRYMASMRGV 129

Query: 127 DLRLGTKLMSHLGQRL 142
           D    ++L+ HL Q+L
Sbjct: 130 DTDTQSRLLRHLSQKL 145


>gi|410924656|ref|XP_003975797.1| PREDICTED: transcription factor HES-1-A-like [Takifugu rubripes]
          Length = 248

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 102/182 (56%), Gaps = 20/182 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++R 
Sbjct: 36  RKSSKPIMEKRRRARINESLGQLKTLIMEALKKDSSRHSKLEKADILEMTVKHLRNLQRL 95

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
           Q L +   TD     ++RAGF+ C  EV++ L++  G+   + T+L+SHL   + +++ I
Sbjct: 96  Q-LTAAVTTDPSFLGKYRAGFSECVGEVTRFLSTCEGVHSEVRTRLLSHLASCVTQINTI 154

Query: 149 SPLSVRVMDVCTPPPSPHSDTYSMPLTPASS--------GSSQVDTCDYTSQYKMYESMP 200
                   + CTP P       +    PA+S        GS    T +    Y  ++ +P
Sbjct: 155 --------NFCTPHPGTSGLGQTGAQMPAASAARMPCKTGSEVHFTAEAMKLYAGFQVVP 206

Query: 201 SP 202
           +P
Sbjct: 207 TP 208


>gi|158296333|ref|XP_316733.3| AGAP006699-PA [Anopheles gambiae str. PEST]
 gi|157016460|gb|EAA11851.3| AGAP006699-PA [Anopheles gambiae str. PEST]
          Length = 374

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 88/142 (61%), Gaps = 8/142 (5%)

Query: 9   QINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGEN 68
           Q+     T  I   +P+ R+   R+  KP++E++RRARIN CL+ELK L++ A++ +   
Sbjct: 11  QVAGTPATTQIPPAEPVKRSSDNRRSNKPIMEKRRRARINNCLNELKTLILDAMKKDPAR 70

Query: 69  VSKLEKADILELTVQHLQKMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPG 125
            SKLEKADILE+TV+HL+ ++RQQ   S   TD    ++F+AGF  CA EV +     P 
Sbjct: 71  HSKLEKADILEMTVKHLENLQRQQTAMSQ-ATDPSVMNKFKAGFNECAQEVGRF----PE 125

Query: 126 IDLRLGTKLMSHLGQRLNEMDK 147
           ++  +  +L+ HL   +N ++K
Sbjct: 126 LEPHVKRRLLQHLNNCINGVNK 147


>gi|397472319|ref|XP_003807697.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor HES-1 [Pan
           paniscus]
          Length = 280

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 92/142 (64%), Gaps = 5/142 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KISPLSVRVMDVCTPPPSPHSD 168
            ++    +       PP PH D
Sbjct: 152 AMT-YPGQPHPALQAPPPPHRD 172


>gi|344282423|ref|XP_003412973.1| PREDICTED: transcription factor HES-1-like [Loxodonta africana]
          Length = 279

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 88/123 (71%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HLG  + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLGNCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|307196837|gb|EFN78273.1| Protein deadpan [Harpegnathos saltator]
          Length = 470

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 94/142 (66%), Gaps = 8/142 (5%)

Query: 17  VDIEQLQPISRT----YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKL 72
           +D E+ +P S++     + RK  KP++E++RRARIN+ LDELK L++ A++ +    SKL
Sbjct: 10  LDEEEFKPRSQSEMTKAELRKSNKPIMEKRRRARINQSLDELKALVLDAMKKDPTRHSKL 69

Query: 73  EKADILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLR 129
           EKADILE+ V+H+Q + RQQ    +A++P     +FR+GF+ CA EVS+ ++    +D  
Sbjct: 70  EKADILEMAVKHIQTVHRQQLSAAIATDPAV-LTKFRSGFSECATEVSRYVSQLENVDPL 128

Query: 130 LGTKLMSHLGQRLNEMDKISPL 151
           +  +L+SHL   ++ + +++P 
Sbjct: 129 VKQRLVSHLNSCVSNLQQMAPF 150


>gi|89242910|gb|ABD64728.1| AmphiHairyA [Branchiostoma floridae]
          Length = 300

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 84/125 (67%), Gaps = 4/125 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  KP++E++RRARIN  L++LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 19  QRRKSSKPIMEKRRRARINDSLNQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 78

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    +  +PV    ++RAG++ C  EVS+ L  + G+D ++  +L+ HL      +D
Sbjct: 79  RQQIADAVIRDPVA-LSKYRAGYSECMTEVSRFLTGSDGVDGQVQQRLLGHLASCCQTVD 137

Query: 147 KISPL 151
            I+P+
Sbjct: 138 TIAPV 142


>gi|260813130|ref|XP_002601272.1| hypothetical protein BRAFLDRAFT_267120 [Branchiostoma floridae]
 gi|229286565|gb|EEN57284.1| hypothetical protein BRAFLDRAFT_267120 [Branchiostoma floridae]
          Length = 300

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 84/125 (67%), Gaps = 4/125 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  KP++E++RRARIN  L++LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 19  QRRKSSKPIMEKRRRARINDSLNQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 78

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    +  +PV    ++RAG++ C  EVS+ L  + G+D ++  +L+ HL      +D
Sbjct: 79  RQQIADAVIRDPVA-LSKYRAGYSECMTEVSRFLTGSDGVDGQVQQRLLGHLASCCQTVD 137

Query: 147 KISPL 151
            I+P+
Sbjct: 138 TIAPV 142


>gi|194766756|ref|XP_001965490.1| GF22522 [Drosophila ananassae]
 gi|190619481|gb|EDV35005.1| GF22522 [Drosophila ananassae]
          Length = 160

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/126 (50%), Positives = 76/126 (60%), Gaps = 11/126 (8%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +SRTYQYRKVMKP+LERKRRARINRCL+ELK L+      + E ++KLEKADILELTV H
Sbjct: 20  MSRTYQYRKVMKPLLERKRRARINRCLEELKLLIKETAYMDSEALAKLEKADILELTVHH 79

Query: 85  LQKMRRQQ--------RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           LQ  RR Q          A       +R+  GF  CA EVS+ L      D +L  K + 
Sbjct: 80  LQDRRRHQVHPTTTTTTPAQFQRLAMERYWNGFRQCALEVSRFLQRH---DRQLNEKFLE 136

Query: 137 HLGQRL 142
            + Q L
Sbjct: 137 AMEQYL 142


>gi|37576207|gb|AAQ93667.1| hairy A protein [Branchiostoma floridae]
          Length = 300

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 84/125 (67%), Gaps = 4/125 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  KP++E++RRARIN  L++LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 19  QRRKSSKPIMEKRRRARINDSLNQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 78

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    +  +PV    ++RAG++ C  EVS+ L  + G+D ++  +L+ HL      +D
Sbjct: 79  RQQIADAVIRDPVA-LSKYRAGYSECMTEVSRFLTGSDGVDDQVQQRLLGHLASCCQTVD 137

Query: 147 KISPL 151
            I+P+
Sbjct: 138 NIAPV 142


>gi|195110351|ref|XP_001999745.1| GI24693 [Drosophila mojavensis]
 gi|193916339|gb|EDW15206.1| GI24693 [Drosophila mojavensis]
          Length = 173

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 21/187 (11%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KP+LER+RRARIN+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPLLERQRRARINKCLDTLKTL-VAELRGD-DGILRMDKAEMLESAVVFM 62

Query: 86  QKMRRQ---QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           ++ +     +  A+ P    + FR G+    NEVS+ +ASTPG+ + LG  +MSHLG+  
Sbjct: 63  RQQKSNKSTEATAATPPMPLESFRNGYMNAVNEVSRVMASTPGMSVDLGKSVMSHLGRVY 122

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSP 202
             + +       +++ C           S PL+PASSG      C+  +   M E     
Sbjct: 123 KNLQQFHEAQTTIIN-CN----------SAPLSPASSGYH--SDCESPAPSPMPE---ES 166

Query: 203 KSVWRPW 209
           + +WRPW
Sbjct: 167 EKLWRPW 173


>gi|313575599|gb|ADR66836.1| hairy-related 6 [Carassius auratus]
          Length = 208

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 99/160 (61%), Gaps = 11/160 (6%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL  M+
Sbjct: 35  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLXNMQ 94

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P T   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 95  RVQMTAALNTDP-TVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQIN 153

Query: 147 KIS-PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVD 185
            ++ P   ++      P  P   ++S P+    S + Q +
Sbjct: 154 AMNYPTQHQI------PAGPPHPSFSQPMVQIPSATQQAN 187


>gi|195349617|ref|XP_002041339.1| GM10203 [Drosophila sechellia]
 gi|194123034|gb|EDW45077.1| GM10203 [Drosophila sechellia]
          Length = 178

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 108/192 (56%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   QA+ + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQAD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++            P  +P       PL+PASSG        Y S  +  +S  S
Sbjct: 129 MLQADQV--------QTSVPTSTPR------PLSPASSG--------YHSDNEDSQSAAS 166

Query: 202 PK----SVWRPW 209
           PK    ++WRPW
Sbjct: 167 PKPAEETMWRPW 178


>gi|355560136|gb|EHH16864.1| hypothetical protein EGK_12230 [Macaca mulatta]
          Length = 216

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 106/195 (54%), Gaps = 28/195 (14%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KISPLSVRVMDVCTPPPSPHSD------------TYSMPLTPASSGSSQVDTCDYTSQYK 194
            +           T P  P  D             +S P+ P  + +S            
Sbjct: 152 AM-----------TYPGQPAPDGQFAFLIPNGAFAHSGPVIPVYTSNSGTSVGPNAVSPS 200

Query: 195 MYESMPSPKSVWRPW 209
              S+ +  S+WRPW
Sbjct: 201 SGPSL-TADSMWRPW 214


>gi|148225440|ref|NP_001081396.1| transcription factor HES-1-A [Xenopus laevis]
 gi|82201548|sp|Q6IRB2.1|HES1A_XENLA RecName: Full=Transcription factor HES-1-A; AltName: Full=Hairy and
           enhancer of split 1-A; AltName: Full=Protein hairy-1;
           Short=Xhairy-1; Short=Xhairy1; Short=Xlh1
 gi|47507255|gb|AAH70988.1| LOC397813 protein [Xenopus laevis]
          Length = 267

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 88/123 (71%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   +N+++
Sbjct: 93  RVQMSAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTDVRTRLLGHLANCMNQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 GMN 154


>gi|55715400|gb|AAV59195.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
          Length = 179

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG     
Sbjct: 63  RQQKTPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      MD         S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSAADFIQNSMDC--------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    +++WRPW
Sbjct: 166 -PSPQPMQQTLWRPW 179


>gi|194908108|ref|XP_001981707.1| GG11459 [Drosophila erecta]
 gi|190656345|gb|EDV53577.1| GG11459 [Drosophila erecta]
          Length = 179

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  ++++    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG     
Sbjct: 63  RQQKTTKKVSQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      MD         S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSATDFIQNTMDC--------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    + VWRPW
Sbjct: 166 -PSPQPMQQPVWRPW 179


>gi|348514652|ref|XP_003444854.1| PREDICTED: transcription factor HES-4-B-like [Oreochromis
           niloticus]
          Length = 291

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 83/118 (70%), Gaps = 2/118 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLA--SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q  A  S   T   ++RAGF  C NEV++ L+++ G++  + ++L++HL   L++M
Sbjct: 93  RVQMSAALSADATVLSKYRAGFNECMNEVTRFLSTSEGVNSEVRSRLLNHLSNCLSQM 150


>gi|58332090|ref|NP_001011194.1| transcription factor HES-1 [Xenopus (Silurana) tropicalis]
 gi|82196208|sp|Q5PPM5.1|HES1_XENTR RecName: Full=Transcription factor HES-1; AltName: Full=Hairy and
           enhancer of split 1; AltName: Full=Protein hairy-1
 gi|56270382|gb|AAH87608.1| hairy and enhancer of split 1 [Xenopus (Silurana) tropicalis]
 gi|68448560|gb|AAY96799.1| hairy1 [Xenopus (Silurana) tropicalis]
 gi|89269534|emb|CAJ82991.1| Helix-loop-helix DNA-binding domain protein with Hairy Orange
           domain, similar to hes1 [Xenopus (Silurana) tropicalis]
          Length = 267

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 88/123 (71%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   +N+++
Sbjct: 93  RVQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTDVRTRLLGHLANCMNQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMN 154


>gi|359952825|gb|AEV91207.1| enhancer of split region protein HLHm5b [Teleopsis dalmanni]
          Length = 170

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 26/186 (13%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILE--LTVQ 83
           S+T  Y KV KP++ER+RRAR+N+CLD LK L V   QA+ + + +++KA++LE  +T  
Sbjct: 9   SKTEHYLKVKKPLIERQRRARMNKCLDTLKTL-VAEFQAD-DAILRMDKAEMLETAITFM 66

Query: 84  HLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
             Q +++ Q + + P  D   +  G+    NEVS+ +A+TPG+++++G  +M+ LG    
Sbjct: 67  RSQTIQKPQNVTTTPSMDG--YCNGYMNAVNEVSRFMAATPGMNVQIGKTVMTQLG---F 121

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPK 203
           E  ++     ++  VC+          S P++PASSG      CD +S      S P  K
Sbjct: 122 EFKRLQQNKSQLTAVCS----------SRPVSPASSGYH--SDCDESSM-----STPVEK 164

Query: 204 SVWRPW 209
            +WRPW
Sbjct: 165 PIWRPW 170


>gi|157278367|ref|NP_001098285.1| Her9 [Oryzias latipes]
 gi|66393608|gb|AAY45953.1| Her9 [Oryzias latipes]
          Length = 288

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 80/109 (73%), Gaps = 1/109 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           R Q  A++  +   ++RAGF  C NEV++ L+++ G++  + ++L+SHL
Sbjct: 93  RVQMSAAD-ASVLSKYRAGFNECMNEVTRFLSTSEGVNTEVRSRLLSHL 140


>gi|313575597|gb|ADR66835.1| hairy-related 6 [Tinca tinca]
          Length = 207

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ M+
Sbjct: 35  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNMQ 94

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P T   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 95  RAQMTAALNTDP-TVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQIN 153

Query: 147 KIS 149
            ++
Sbjct: 154 AMN 156


>gi|357623394|gb|EHJ74566.1| putative transcription factor hes-1 [Danaus plexippus]
          Length = 549

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 15/183 (8%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E+KRRARIN CL+ELKDL++ A+  +    SKLEKADILELTV+HLQ ++
Sbjct: 175 ELRKTNKPIMEKKRRARINNCLNELKDLLMDAMDKDPARHSKLEKADILELTVKHLQTLQ 234

Query: 90  RQQRLASNPVTDA--DRFRAGFTTCANEVSKC---LASTP-GIDLRLGTKLMSHLG--QR 141
           RQQ  A+     A   RF+AGF  CA EV +    LAS P G+  RLG  L + L   +R
Sbjct: 235 RQQLAAAIAADPAVLHRFKAGFGDCAGEVRRYLSRLASVPTGLRYRLGNHLNTCLSGIER 294

Query: 142 LNEMD--KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESM 199
           L+  D   + P  +R+ D    P + H    + P +P  S  S    CD +++    E+ 
Sbjct: 295 LHSTDYPPLIPDPLRLDD--ERPSAFHYVRSTKPTSPPLSPLSCDSACDSSTE---LETP 349

Query: 200 PSP 202
           P P
Sbjct: 350 PRP 352



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 29/36 (80%)

Query: 30 QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE 65
          + RK  KP++E+KRRARIN CL+ELKDL++ A+  +
Sbjct: 56 ELRKTNKPIMEKKRRARINNCLNELKDLLMDAMDKD 91


>gi|194743680|ref|XP_001954328.1| GF16802 [Drosophila ananassae]
 gi|190627365|gb|EDV42889.1| GF16802 [Drosophila ananassae]
          Length = 180

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 34/197 (17%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+T  Y+KV KP+LER+RRARIN+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   SKTQIYQKVKKPLLERQRRARINKCLDTLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  --QKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---- 139
             QK+ + +++   P    D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG    
Sbjct: 63  RKQKIEKTEKV-EEPKLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRIYK 121

Query: 140 --QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYE 197
             Q+ +E    + +   +   CT        T   PL+PASSG      CD         
Sbjct: 122 NLQQFHEAQTANEIPAPIYMDCT--------TDKAPLSPASSGYHS--DCD--------S 163

Query: 198 SMPSP-----KSVWRPW 209
            +PSP     + +WR W
Sbjct: 164 PLPSPMPVEGEKLWRSW 180


>gi|209731346|gb|ACI66542.1| Transcription factor HES-1 [Salmo salar]
          Length = 289

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLA-SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q  A S   T   ++RAGF  C NEV++ L+++ G++  + ++L++HL   L ++
Sbjct: 93  RVQMTALSADTTVLSKYRAGFNECMNEVTRFLSTSEGVNTEVRSRLLNHLSGCLGQL 149


>gi|148231081|ref|NP_001079386.1| transcription factor HES-1-B [Xenopus laevis]
 gi|82211797|sp|Q8AVU4.1|HES1B_XENLA RecName: Full=Transcription factor HES-1-B; AltName: Full=Hairy and
           enhancer of split 1-B
 gi|27371053|gb|AAH41261.1| Hes1 protein [Xenopus laevis]
 gi|118835755|gb|AAI28933.1| Hes1 protein [Xenopus laevis]
          Length = 267

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 93/139 (66%), Gaps = 5/139 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   +N++ 
Sbjct: 93  RVQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTDVRTRLLGHLANCVNQIH 151

Query: 147 KIS-PLSVRVMDVCTPPPS 164
            ++ P   ++     P P+
Sbjct: 152 AMNYPAQPQIPSAAAPHPA 170


>gi|55715320|gb|AAV59121.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715372|gb|AAV59169.1| enhancer of split complex m5 protein [Drosophila melanogaster]
          Length = 178

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++         V T  P         PL+PASSG        Y S  +  +S  S
Sbjct: 129 MLQADQVQ------TSVTTSTPR--------PLSPASSG--------YHSDNEDSQSAAS 166

Query: 202 PKSV----WRPW 209
           PK V    WRPW
Sbjct: 167 PKQVEETMWRPW 178


>gi|225711288|gb|ACO11490.1| Transcription factor HES-1 [Caligus rogercresseyi]
          Length = 289

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLA-SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q  A S   T   ++RAGF  C NEV++ L+++ G++  + ++L++HL   L ++
Sbjct: 93  RVQMTALSADTTVLSKYRAGFNECMNEVTRFLSTSEGVNTEVRSRLLNHLSGCLGQL 149


>gi|242008497|ref|XP_002425040.1| transcription factor HES-1, putative [Pediculus humanus corporis]
 gi|212508689|gb|EEB12302.1| transcription factor HES-1, putative [Pediculus humanus corporis]
          Length = 549

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 86/127 (67%), Gaps = 8/127 (6%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           +RT + R+  KP++E++RRARIN  L+ELK L++ A++ +    SKLEKADILE+TV++L
Sbjct: 53  TRTNENRRSNKPIMEKRRRARINNSLNELKTLILDAMKKDPARHSKLEKADILEMTVKYL 112

Query: 86  QKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           + ++R+Q     AS+P   A++FRAGFT CA EV +     PG+D  +  +L+ HL   L
Sbjct: 113 EALQRKQVAMAAASDPNV-ANKFRAGFTECAGEVGRF----PGLDGPVKRRLLQHLANCL 167

Query: 143 NEMDKIS 149
           N  + +S
Sbjct: 168 NSANPMS 174


>gi|194753135|ref|XP_001958873.1| GF12602 [Drosophila ananassae]
 gi|190620171|gb|EDV35695.1| GF12602 [Drosophila ananassae]
          Length = 441

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 83/126 (65%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +     KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHVKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + ++P     +F+ GF  CA EV++ ++   GID  +  +L +HL    N ++
Sbjct: 99  RQQLNMAIQTDPSV-VQKFKTGFVECAEEVNRYVSQLDGIDSGVRQRLSAHLNNCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|195349623|ref|XP_002041342.1| GM10301 [Drosophila sechellia]
 gi|194123037|gb|EDW45080.1| GM10301 [Drosophila sechellia]
          Length = 179

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG     
Sbjct: 63  RQQKTPKKVAQEERSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      MD         S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSATDFLQNAMDC--------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    + +WRPW
Sbjct: 166 -PSPQPMQQPLWRPW 179


>gi|194908130|ref|XP_001981711.1| GG12204 [Drosophila erecta]
 gi|190656349|gb|EDV53581.1| GG12204 [Drosophila erecta]
          Length = 178

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++            P  +P       PL+PASSG        Y S  +  +S  S
Sbjct: 129 MLQADQV--------QTSVPASTPR------PLSPASSG--------YHSDNEDSQSAAS 166

Query: 202 PK----SVWRPW 209
           PK    ++WRPW
Sbjct: 167 PKPAEETMWRPW 178


>gi|444509945|gb|ELV09438.1| Transcription factor HES-1 [Tupaia chinensis]
          Length = 222

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|426217684|ref|XP_004003082.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor HES-1 [Ovis
           aries]
          Length = 224

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|348582758|ref|XP_003477143.1| PREDICTED: transcription factor HES-1-like [Cavia porcellus]
          Length = 279

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|17738215|ref|NP_524513.1| enhancer of split m8, helix-loop-helix [Drosophila melanogaster]
 gi|12644122|sp|P13098.2|ESM8_DROME RecName: Full=Enhancer of split m8 protein; Short=E(spl)m8
 gi|7301429|gb|AAF56555.1| enhancer of split m8, helix-loop-helix [Drosophila melanogaster]
 gi|55715244|gb|AAV59051.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715283|gb|AAV59087.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715296|gb|AAV59099.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715309|gb|AAV59111.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715322|gb|AAV59123.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715335|gb|AAV59135.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715348|gb|AAV59147.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715361|gb|AAV59159.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715374|gb|AAV59171.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715413|gb|AAV59207.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|113204953|gb|ABI34210.1| RT01041p [Drosophila melanogaster]
 gi|113205017|gb|ABI34242.1| RT01141p [Drosophila melanogaster]
 gi|115646594|gb|ABI34215.2| RT01058p [Drosophila melanogaster]
 gi|115646690|gb|ABI34248.2| RT01158p [Drosophila melanogaster]
          Length = 179

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG     
Sbjct: 63  RQQKTPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      MD         S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSAADFIQNSMDC--------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    + +WRPW
Sbjct: 166 -PSPQPMQQPLWRPW 179


>gi|305377064|ref|NP_001182160.1| transcription factor HES-1 [Sus scrofa]
 gi|300521740|gb|ADK26059.1| hairy and enhancer of split 1 [Sus scrofa]
          Length = 280

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVEHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|89242914|gb|ABD64730.1| AmphiHairyC [Branchiostoma floridae]
          Length = 290

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 16/183 (8%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R  + RK  KP++E++RRARIN  L++LK L++ AL+ +    SKLEKADILE+TV+HL+
Sbjct: 10  RLGETRKSSKPIMEKRRRARINDSLNQLKTLILDALKKDSSRHSKLEKADILEMTVKHLR 69

Query: 87  KMRRQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ  A+   NP +   ++RAGF  C  EV++ L ++  +D ++  +L++HL     
Sbjct: 70  SLQRQQLTAAANTNP-SLPGQYRAGFNECLMEVNRFLGASDSVDTQVRQRLLNHLA---- 124

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVD------TCDYTSQYKMYE 197
                SP          P   PH+    + +  A++G   V        C    Q  MY 
Sbjct: 125 --GACSPARPGTYHAAQPAVFPHAQPVHVQVPVATTGGQHVQLSPVQAPCPQAGQTTMYG 182

Query: 198 SMP 200
            +P
Sbjct: 183 GIP 185


>gi|37576211|gb|AAQ93669.1| hairy C protein [Branchiostoma floridae]
          Length = 290

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 16/183 (8%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R  + RK  KP++E++RRARIN  L++LK L++ AL+ +    SKLEKADILE+TV+HL+
Sbjct: 10  RLGETRKSSKPIMEKRRRARINDSLNQLKTLILDALKKDSSRHSKLEKADILEMTVKHLR 69

Query: 87  KMRRQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ  A+   NP +   ++RAGF  C  EV++ L ++  +D ++  +L++HL     
Sbjct: 70  SLQRQQLTAAANTNP-SLPGQYRAGFNECLMEVNRFLGASDSVDTQVRQRLLNHLA---- 124

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVD------TCDYTSQYKMYE 197
                SP          P   PH+    + +  A++G   V        C    Q  MY 
Sbjct: 125 --GACSPARPGTYHAAQPAVFPHAQPVHVQVPVATTGGQHVQLSPVQAPCPQAGQTTMYG 182

Query: 198 SMP 200
            +P
Sbjct: 183 GIP 185


>gi|440899512|gb|ELR50806.1| Transcription factor HES-1, partial [Bos grunniens mutus]
          Length = 238

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 35  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 94

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 95  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 153

Query: 147 KIS 149
            ++
Sbjct: 154 AMT 156


>gi|55715387|gb|AAV59183.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
          Length = 179

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG     
Sbjct: 63  RQQKTPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      MD         S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSATDFIQNSMDC--------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    + +WRPW
Sbjct: 166 -PSPQPMQQPLWRPW 179


>gi|17738211|ref|NP_524511.1| enhancer of split m5, helix-loop-helix [Drosophila melanogaster]
 gi|119571|sp|P13096.1|ESM5_DROME RecName: Full=Enhancer of split m5 protein; Short=E(spl)m5
 gi|7952|emb|CAA34552.1| unnamed protein product [Drosophila melanogaster]
 gi|7301426|gb|AAF56552.1| enhancer of split m5, helix-loop-helix [Drosophila melanogaster]
 gi|17944352|gb|AAL48068.1| RE69770p [Drosophila melanogaster]
 gi|55715242|gb|AAV59049.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715268|gb|AAV59073.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715281|gb|AAV59085.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715294|gb|AAV59097.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715307|gb|AAV59109.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715333|gb|AAV59133.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715346|gb|AAV59145.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715359|gb|AAV59157.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715385|gb|AAV59181.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715398|gb|AAV59193.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715411|gb|AAV59205.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715424|gb|AAV59217.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|55715437|gb|AAV59229.1| enhancer of split complex m5 protein [Drosophila melanogaster]
 gi|220955698|gb|ACL90392.1| HLHm5-PA [synthetic construct]
          Length = 178

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++         V T  P         PL+PASSG        Y S  +  +S  S
Sbjct: 129 MLQADQVQ------TSVTTSTPR--------PLSPASSG--------YHSDNEDSQSAAS 166

Query: 202 PKSV----WRPW 209
           PK V    WRPW
Sbjct: 167 PKPVEETMWRPW 178


>gi|195574067|ref|XP_002105011.1| HLHm5 [Drosophila simulans]
 gi|194200938|gb|EDX14514.1| HLHm5 [Drosophila simulans]
          Length = 178

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++            P  +P       PL+PASSG        Y S  +  +S  S
Sbjct: 129 MLQADQV--------QTSVPTSTPR------PLSPASSG--------YHSDNEDSQSAAS 166

Query: 202 PK----SVWRPW 209
           PK    ++WRPW
Sbjct: 167 PKPAEETMWRPW 178


>gi|74208969|dbj|BAE21226.1| unnamed protein product [Mus musculus]
          Length = 282

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 95/137 (69%), Gaps = 5/137 (3%)

Query: 16  TVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKA 75
           +V+  Q +P + + ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKA
Sbjct: 20  SVNTTQDKPKTAS-EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKA 78

Query: 76  DILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           DILE+TV+HL+ ++R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T
Sbjct: 79  DILEMTVKHLRNLQRAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRT 137

Query: 133 KLMSHLGQRLNEMDKIS 149
           +L+ HL   + +++ ++
Sbjct: 138 RLLGHLANCMTQINAMT 154


>gi|296224876|ref|XP_002758253.1| PREDICTED: transcription factor HES-1 [Callithrix jacchus]
          Length = 280

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|193608353|ref|XP_001949685.1| PREDICTED: protein hairy-like [Acyrthosiphon pisum]
          Length = 284

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 77/115 (66%), Gaps = 6/115 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E+KRRARIN CL+ELK L++ A + +    SKLEKADILE+TV+HL+ M+R 
Sbjct: 33  RRSNKPIMEKKRRARINNCLNELKTLILDATKKDPARHSKLEKADILEMTVKHLESMQRH 92

Query: 92  QRL--ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
                A+   T A++F+AGFT C NEV++     PG++  +  +LM HL    N+
Sbjct: 93  NVALSAATESTVANKFKAGFTECTNEVNRF----PGLEPHVRKRLMQHLNTYFNK 143


>gi|195504136|ref|XP_002098951.1| GE10648 [Drosophila yakuba]
 gi|194185052|gb|EDW98663.1| GE10648 [Drosophila yakuba]
          Length = 179

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 13  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 70

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 71  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 129

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++            P  +P       PL+PASSG        Y S  +  +S  S
Sbjct: 130 MLQADQV--------QTSVPTSTPR------PLSPASSG--------YHSDNEDSQSAAS 167

Query: 202 PK----SVWRPW 209
           PK    ++WRPW
Sbjct: 168 PKPAEETMWRPW 179


>gi|60827101|gb|AAX36784.1| hairy and enhancer of split 1 [synthetic construct]
          Length = 281

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|5442273|gb|AAD43304.1|AF139914_1 basic-helix-loop-helix transcription factor hairy2 [Xenopus laevis]
          Length = 279

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 100/162 (61%), Gaps = 8/162 (4%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L S+P +   ++RAGF  C NEV++ L++  G++  + T+L+ HL   L ++ 
Sbjct: 93  RVQMTAALTSDP-SVLGKYRAGFNECTNEVTRFLSTCEGVNTEVRTRLLGHLSSCLGQIV 151

Query: 147 KIS----PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV 184
            ++    P S + + V  P  +P     S  + PA + S +V
Sbjct: 152 AMNYQQPPSSQQPLHVQLPSSTPAPMPISCKVNPAEAISPKV 193


>gi|77736301|ref|NP_001029850.1| transcription factor HES-1 [Bos taurus]
 gi|84029306|sp|Q3ZBG4.1|HES1_BOVIN RecName: Full=Transcription factor HES-1; AltName: Full=Hairy and
           enhancer of split 1
 gi|73586884|gb|AAI03310.1| Hairy and enhancer of split 1, (Drosophila) [Bos taurus]
 gi|296491306|tpg|DAA33369.1| TPA: transcription factor HES-1 [Bos taurus]
          Length = 280

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|431918404|gb|ELK17629.1| Transcription factor HES-1 [Pteropus alecto]
          Length = 275

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 28  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 87

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 88  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 146

Query: 147 KIS 149
            ++
Sbjct: 147 AMT 149


>gi|729448|sp|Q07291.1|ESM8_DROHY RecName: Full=Enhancer of split m8 protein; Short=E(spl)m8
 gi|298012|emb|CAA50654.1| bHLH m8 [Drosophila hydei]
          Length = 183

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 13/188 (6%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KP+LER+RRARIN+CLD LK L+      +G  + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPLLERQRRARINKCLDTLKTLVADVRGDDG--ILRMDKAEMLESAVVFM 62

Query: 86  QKMRRQQR----LASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           ++ +  +      A+ P    + FR G+    NEVS+ +ASTPG+ + LG  +MSHLG+ 
Sbjct: 63  RQQKTGKSTEIPAAATPPMPLESFRNGYMNAVNEVSRVMASTPGMSVDLGKSVMSHLGRV 122

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
              + +      + M           +  S PL+PASSG      C+  +   M E    
Sbjct: 123 YKNLQQFH--EAQTMSESEAATELSINCNSAPLSPASSGYH--SDCESPAPSPMPE---E 175

Query: 202 PKSVWRPW 209
            + +WRPW
Sbjct: 176 GEKLWRPW 183


>gi|229890392|sp|Q90Z12.2|HES4A_XENLA RecName: Full=Transcription factor HES-4-A; AltName: Full=Hairy and
           enhancer of split 4-A; AltName: Full=Protein hairy-2;
           Short=Xhairy2; AltName: Full=Protein hairy-2a;
           Short=Xhairy2a
          Length = 281

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 100/162 (61%), Gaps = 8/162 (4%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L S+P +   ++RAGF  C NEV++ L++  G++  + T+L+ HL   L ++ 
Sbjct: 93  RVQMTAALTSDP-SVLGKYRAGFNECTNEVTRFLSTCEGVNTEVRTRLLGHLSSCLGQIV 151

Query: 147 KIS----PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV 184
            ++    P S + + V  P  +P     S  + PA + S +V
Sbjct: 152 AMNYQQPPSSQQPLHVQLPSSTPAPMPISCKVNPAEAISPKV 193


>gi|24657600|gb|AAH39152.1| HES1 protein [Homo sapiens]
 gi|123980850|gb|ABM82254.1| hairy and enhancer of split 1, (Drosophila) [synthetic construct]
 gi|123993357|gb|ABM84280.1| hairy and enhancer of split 1, (Drosophila) [synthetic construct]
 gi|124000327|gb|ABM87672.1| hairy and enhancer of split 1, (Drosophila) [synthetic construct]
          Length = 277

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 30  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 89

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 90  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 148

Query: 147 KIS 149
            ++
Sbjct: 149 AMT 151


>gi|148747225|ref|NP_077336.3| transcription factor HES-1 [Rattus norvegicus]
 gi|547626|sp|Q04666.1|HES1_RAT RecName: Full=Transcription factor HES-1; AltName: Full=Hairy and
           enhancer of split 1; AltName: Full=Hairy-like protein;
           AltName: Full=RHL
 gi|220761|dbj|BAA02682.1| HES-1 factor [Rattus norvegicus]
 gi|38197598|gb|AAH61730.1| Hairy and enhancer of split 1 (Drosophila) [Rattus norvegicus]
 gi|149020003|gb|EDL78151.1| hairy and enhancer of split 1 (Drosophila), isoform CRA_b [Rattus
           norvegicus]
 gi|384218|prf||1905315A HES-1 protein
          Length = 281

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|5031763|ref|NP_005515.1| transcription factor HES-1 [Homo sapiens]
 gi|55621718|ref|XP_516956.1| PREDICTED: transcription factor HES-1 isoform 3 [Pan troglodytes]
 gi|395839747|ref|XP_003792741.1| PREDICTED: transcription factor HES-1 [Otolemur garnettii]
 gi|402861964|ref|XP_003895343.1| PREDICTED: transcription factor HES-1 [Papio anubis]
 gi|403270207|ref|XP_003927082.1| PREDICTED: transcription factor HES-1 [Saimiri boliviensis
           boliviensis]
 gi|426343360|ref|XP_004038278.1| PREDICTED: transcription factor HES-1 [Gorilla gorilla gorilla]
 gi|3913825|sp|Q14469.1|HES1_HUMAN RecName: Full=Transcription factor HES-1; AltName: Full=Class B
           basic helix-loop-helix protein 39; Short=bHLHb39;
           AltName: Full=Hairy and enhancer of split 1; AltName:
           Full=Hairy homolog; AltName: Full=Hairy-like protein;
           Short=hHL
 gi|780128|gb|AAA65220.1| also called HHL [Homo sapiens]
 gi|7020488|dbj|BAA91149.1| unnamed protein product [Homo sapiens]
 gi|8118620|gb|AAF73060.1| hairy [Homo sapiens]
 gi|49456641|emb|CAG46641.1| HES1 [Homo sapiens]
 gi|162318126|gb|AAI56517.1| Hairy and enhancer of split 1, (Drosophila) [synthetic construct]
 gi|225000906|gb|AAI72546.1| Hairy and enhancer of split 1, (Drosophila) [synthetic construct]
 gi|261858276|dbj|BAI45660.1| hairy and enhancer of split 1 [synthetic construct]
 gi|387539984|gb|AFJ70619.1| transcription factor HES-1 [Macaca mulatta]
 gi|410267206|gb|JAA21569.1| hairy and enhancer of split 1 [Pan troglodytes]
 gi|410289446|gb|JAA23323.1| hairy and enhancer of split 1 [Pan troglodytes]
          Length = 280

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|410348418|gb|JAA40813.1| hairy and enhancer of split 1 [Pan troglodytes]
          Length = 280

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|291400427|ref|XP_002716563.1| PREDICTED: hairy and enhancer of split 1 [Oryctolagus cuniculus]
          Length = 279

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|220942582|gb|ACL83834.1| HLHm5-PA [synthetic construct]
          Length = 179

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++         V T  P         PL+PASSG        Y S  +  +S  S
Sbjct: 129 MLQADQVQ------TSVTTSTPR--------PLSPASSG--------YHSDNEDSQSAAS 166

Query: 202 PKSV----WRPW 209
           PK V    WRPW
Sbjct: 167 PKPVEETMWRPW 178


>gi|297672798|ref|XP_002814476.1| PREDICTED: transcription factor HES-1 [Pongo abelii]
          Length = 216

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|126344127|ref|XP_001377755.1| PREDICTED: transcription factor HES-1-like [Monodelphis domestica]
          Length = 360

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 84/122 (68%), Gaps = 4/122 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRSLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+ +P +   ++RAGF  C NEV++ L+S  G+   + ++L+SHL   LN++ 
Sbjct: 93  RVQVTAALSGDP-SVLGKYRAGFNECMNEVTRFLSSCDGVTSDVRSRLLSHLAACLNQLG 151

Query: 147 KI 148
            +
Sbjct: 152 PV 153


>gi|147906516|ref|NP_001082574.1| transcription factor HES-4-A [Xenopus laevis]
 gi|49255956|gb|AAH71075.1| Hairy2 protein [Xenopus laevis]
          Length = 281

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 100/162 (61%), Gaps = 8/162 (4%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L S+P +   ++RAGF  C NEV++ L++  G++  + T+L+ HL   L ++ 
Sbjct: 93  RVQMTAALTSDP-SVLGKYRAGFNECTNEVTRFLSTCEGVNTEVRTRLLGHLSSCLGQIV 151

Query: 147 KIS----PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV 184
            ++    P S + + V  P  +P     S  + PA + S +V
Sbjct: 152 AMNYQQPPSSQQPLHVQLPSSTPAPMPISCKVNPAEAISPKV 193


>gi|14488040|gb|AAK63841.1|AF383159_1 hairy2a [Xenopus laevis]
          Length = 281

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 82/119 (68%), Gaps = 4/119 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q    L S+P +   ++RAGF  C NEV++ L++  G++  + T+L+ HL   L ++
Sbjct: 93  RVQTTAALTSDP-SVLGKYRAGFNECTNEVTRFLSTCEGVNTEVRTRLLGHLSSCLGQI 150


>gi|449509773|ref|XP_002189462.2| PREDICTED: transcription factor HES-1-B-like [Taeniopygia guttata]
          Length = 258

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 86/122 (70%), Gaps = 4/122 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRSLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P T   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-TVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQIN 151

Query: 147 KI 148
            +
Sbjct: 152 TM 153


>gi|55715450|gb|AAV59241.1| enhancer of split complex m5 protein [Drosophila simulans]
          Length = 178

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++            P  +P       PL+PASSG        Y S  +  +S  S
Sbjct: 129 MLQADQV--------QTSVPTSTPR------PLSPASSG--------YHSDNEDSQSAAS 166

Query: 202 PK----SVWRPW 209
           PK    ++WRPW
Sbjct: 167 PKPAEETMWRPW 178


>gi|351694940|gb|EHA97858.1| Transcription factor HES-1 [Heterocephalus glaber]
          Length = 279

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|194022542|gb|ACF32779.1| hairy [Tribolium confusum]
          Length = 255

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 8/142 (5%)

Query: 9   QINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGEN 68
           Q N + N   +E      R    R+  KP++E++RRARIN  L+ELK L++ A++ +   
Sbjct: 11  QPNTVPNNNQMEMASVTKRVSDNRRSNKPIMEKRRRARINNSLNELKTLILDAMKKDPAR 70

Query: 69  VSKLEKADILELTVQHLQKMRRQQRLASNPVTD---ADRFRAGFTTCANEVSKCLASTPG 125
            SKLEKADILE+TV+HLQ ++RQQ  A +  TD     +FRAGF+ CA+EV +     PG
Sbjct: 71  HSKLEKADILEMTVKHLQNLQRQQ-AAMSAATDPSVVSKFRAGFSECASEVGRF----PG 125

Query: 126 IDLRLGTKLMSHLGQRLNEMDK 147
           ++  +  +L+ HL   LN+  K
Sbjct: 126 LEPVVKRRLLQHLASCLNQGTK 147


>gi|195504129|ref|XP_002098948.1| GE23650 [Drosophila yakuba]
 gi|194185049|gb|EDW98660.1| GE23650 [Drosophila yakuba]
          Length = 179

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG     
Sbjct: 63  RQQKTTKKVAREEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      MD         S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSATDFLQNSMDC--------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    + +WRPW
Sbjct: 166 -PSPQPMQQPLWRPW 179


>gi|6680205|ref|NP_032261.1| transcription factor HES-1 [Mus musculus]
 gi|547625|sp|P35428.1|HES1_MOUSE RecName: Full=Transcription factor HES-1; AltName: Full=Hairy and
           enhancer of split 1
 gi|475014|dbj|BAA03931.1| helix-loop-helix factor HES-1 [Mus musculus]
 gi|17390876|gb|AAH18375.1| Hairy and enhancer of split 1 (Drosophila) [Mus musculus]
 gi|30410860|gb|AAH51428.1| Hairy and enhancer of split 1 (Drosophila) [Mus musculus]
 gi|74225784|dbj|BAE21713.1| unnamed protein product [Mus musculus]
          Length = 282

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|194743686|ref|XP_001954331.1| GF18222 [Drosophila ananassae]
 gi|190627368|gb|EDV42892.1| GF18222 [Drosophila ananassae]
          Length = 182

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 31/193 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 13  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 70

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 71  MRKEVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 129

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D+    + ++            ++ S PL+PASSG        Y S  +  E+  S
Sbjct: 130 MLQADQHQQQATQL------------ESASRPLSPASSG--------YHSDTEESEAAVS 169

Query: 202 PK-----SVWRPW 209
           PK     S+WRPW
Sbjct: 170 PKPAQSSSMWRPW 182


>gi|410921586|ref|XP_003974264.1| PREDICTED: transcription factor HES-1-B-like [Takifugu rubripes]
          Length = 277

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALNTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMN 154


>gi|157278421|ref|NP_001098313.1| Her6.1 [Oryzias latipes]
 gi|66393604|gb|AAY45951.1| Her6.1 [Oryzias latipes]
          Length = 277

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 85/122 (69%), Gaps = 4/122 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALNTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KI 148
            +
Sbjct: 152 AM 153


>gi|260813118|ref|XP_002601266.1| hypothetical protein BRAFLDRAFT_127513 [Branchiostoma floridae]
 gi|229286559|gb|EEN57278.1| hypothetical protein BRAFLDRAFT_127513 [Branchiostoma floridae]
          Length = 290

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 97/183 (53%), Gaps = 16/183 (8%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R  + RK  KP++E++RRARIN  L++LK L++ AL+ +    SKLEKADILE+TV+HL+
Sbjct: 10  RLGETRKSSKPIMEKRRRARINDSLNQLKTLILDALKKDSSRHSKLEKADILEMTVKHLR 69

Query: 87  KMRRQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ  A+   NP     ++RAGF  C  EV++ L ++  +D ++  +L++HL     
Sbjct: 70  SLQRQQLTAAANTNPALPG-QYRAGFNECLMEVNRFLGASDSVDTQVRQRLLNHLA---- 124

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVD------TCDYTSQYKMYE 197
                SP          P   PH+    + +  A +G   V        C    Q  MY 
Sbjct: 125 --GACSPARPGTYPAAQPAVFPHAQPVQVQVPVAPTGGHHVQLSPVQAPCPQAGQTTMYG 182

Query: 198 SMP 200
            +P
Sbjct: 183 GIP 185


>gi|195574073|ref|XP_002105014.1| E(spl) [Drosophila simulans]
 gi|55715452|gb|AAV59243.1| basic helix-loop-helix transcription factor [Drosophila simulans]
 gi|194200941|gb|EDX14517.1| E(spl) [Drosophila simulans]
          Length = 179

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG     
Sbjct: 63  RQQKTPKKVAQEERSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      MD         S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSATDFLQNSMDC--------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    + +WRPW
Sbjct: 166 -PSPQPMQQPLWRPW 179


>gi|126343151|ref|XP_001363166.1| PREDICTED: transcription factor HES-1-like [Monodelphis domestica]
          Length = 276

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRTLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P T   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   ++++ 
Sbjct: 93  RAQMTAALSTDP-TVLGKYRAGFSECMNEVTRFLSTCEGVNTDVRTRLLGHLANCMSQIH 151

Query: 147 KIS 149
            ++
Sbjct: 152 ALN 154


>gi|332023323|gb|EGI63577.1| Protein hairy [Acromyrmex echinatior]
          Length = 360

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 84/123 (68%), Gaps = 8/123 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN  L++LK L++ +++ +    SKLEKADILELTV+HL+
Sbjct: 46  RSGENRRSNKPIMEKRRRARINNSLNDLKTLVLESMKKDPSRHSKLEKADILELTVKHLE 105

Query: 87  KMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ     A++P    ++FRAG+T CA+EV K     PG+D  +  +LM+HL   L 
Sbjct: 106 TLQRQQVAMAAAADP-NILNKFRAGYTECASEVGKF----PGLDASVKRRLMAHLASCLG 160

Query: 144 EMD 146
            +D
Sbjct: 161 PID 163


>gi|47225756|emb|CAG08099.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 277

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 85/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALNTDPSVFG-KYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMN 154


>gi|380793133|gb|AFE68442.1| transcription factor HES-1, partial [Macaca mulatta]
          Length = 157

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|148665302|gb|EDK97718.1| hairy and enhancer of split 1 (Drosophila) [Mus musculus]
          Length = 209

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|194222702|ref|XP_001498894.2| PREDICTED: transcription factor HES-1-like, partial [Equus
           caballus]
          Length = 155

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|195024700|ref|XP_001985924.1| GH20825 [Drosophila grimshawi]
 gi|193901924|gb|EDW00791.1| GH20825 [Drosophila grimshawi]
          Length = 456

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 84/126 (66%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + ++P     +F+ GF  CA EV++ ++   GI+  +  +L +HL    N ++
Sbjct: 99  RQQLNMAIQTDPGV-VHKFKTGFVECAEEVNRYVSQMDGIEPGVRQRLSAHLNNCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|225706456|gb|ACO09074.1| Transcription factor HES-1 [Osmerus mordax]
          Length = 290

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 82/118 (69%), Gaps = 2/118 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLASNPV--TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q  A+     T   ++RAGF  C NEV++ L+++ G++  + ++L++HL   + +M
Sbjct: 93  RVQMTAALTADSTVLSKYRAGFNECMNEVTRFLSTSEGVNTEVRSRLLNHLSGCMGQM 150


>gi|4587146|dbj|BAA76633.1| newt HES1 [Cynops pyrrhogaster]
          Length = 251

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 105/184 (57%), Gaps = 18/184 (9%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 34  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 93

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P T   ++RAGF  C NEV++ L++  G++  + T+L+ HL   L  M 
Sbjct: 94  RVQMTAALSADP-TVLGKYRAGFNECMNEVTRFLSTCEGVNTEVRTRLLGHLSGCLGGMA 152

Query: 147 KIS-PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQ-VDTCDYTSQYKMYESMPSPKS 204
            ++ P  V+        P P     + P  P   G  Q V   D   Q+     +PSP  
Sbjct: 153 AMNYPQHVQ--------PGPGPCKLNSPEPPKVYGGFQLVPATD--GQFAFL--IPSPSP 200

Query: 205 VWRP 208
           V +P
Sbjct: 201 VLQP 204


>gi|55715439|gb|AAV59231.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
          Length = 179

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG     
Sbjct: 63  RQQKTPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      M VC       S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSATNFIQNSM-VC-------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    + +WRPW
Sbjct: 166 -PSPQPMQQPLWRPW 179


>gi|55715462|gb|AAV59252.1| enhancer of split complex m5 protein [Drosophila simulans]
          Length = 178

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 32/192 (16%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QR 141
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG   QR
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           + + D++            P  +P       PL+PASSG        Y S  +  +S  S
Sbjct: 129 MLQADQV--------QTSVPTYTPR------PLSPASSG--------YHSDNEDSQSAAS 166

Query: 202 PK----SVWRPW 209
           PK    ++WRPW
Sbjct: 167 PKPAEETMWRPW 178


>gi|432105209|gb|ELK31565.1| Transcription factor HES-1 [Myotis davidii]
          Length = 228

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 80/113 (70%), Gaps = 4/113 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL 
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLA 144


>gi|37576213|gb|AAQ93670.1| hairy D protein [Branchiostoma floridae]
          Length = 290

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 77/111 (69%), Gaps = 4/111 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN  L ELK L++ AL  +    SKLEKADILE+TV+HL+ ++RQ
Sbjct: 18  RKSSKPIMEKRRRARINESLTELKTLILEALNKDSSRHSKLEKADILEMTVKHLRNLQRQ 77

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           Q +A+   TD     ++R+GF+ C  EVS+ + S  G+D ++  +L++HL 
Sbjct: 78  Q-MAAAVSTDPSLLGKYRSGFSECMTEVSRVMGSMDGVDGQVKQRLINHLA 127


>gi|149020002|gb|EDL78150.1| hairy and enhancer of split 1 (Drosophila), isoform CRA_a [Rattus
           norvegicus]
          Length = 205

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|55715257|gb|AAV59063.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715270|gb|AAV59075.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
 gi|55715426|gb|AAV59219.1| basic helix-loop-helix transcription factor [Drosophila
           melanogaster]
          Length = 179

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 31/195 (15%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG----- 139
           ++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M HLG     
Sbjct: 63  RQQKTPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMIHLGRVYKN 122

Query: 140 -QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYES 198
            Q+ +E    +      MD         S     PL+PASSG      CD  +       
Sbjct: 123 LQQFHEAQSAADFIQNSMDC--------SSMDKAPLSPASSGYH--SDCDSPA------- 165

Query: 199 MPSP----KSVWRPW 209
            PSP    + +WRPW
Sbjct: 166 -PSPQPMQQPLWRPW 179


>gi|387019055|gb|AFJ51645.1| Transcription factor HES-1-like [Crotalus adamanteus]
          Length = 289

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 83/119 (69%), Gaps = 4/119 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q    L+++P T   ++RAGF  C NEV++ L++  G++  + ++L+ HL   L ++
Sbjct: 93  RAQMTAALSADP-TVLGKYRAGFNECMNEVTRFLSTCEGVNTEVRSRLLGHLSNCLGQI 150


>gi|89242916|gb|ABD64731.1| AmphiHairyD [Branchiostoma floridae]
          Length = 290

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 77/111 (69%), Gaps = 4/111 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN  L ELK L++ AL  +    SKLEKADILE+TV+HL+ ++RQ
Sbjct: 18  RKSSKPIMEKRRRARINESLTELKTLILEALNKDSSRHSKLEKADILEMTVKHLRNLQRQ 77

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           Q +A+   TD     ++R+GF+ C  EVS+ + S  G+D ++  +L++HL 
Sbjct: 78  Q-MAAAVSTDPSLLGKYRSGFSECMTEVSRVMGSMDGVDGQVKQRLINHLA 127


>gi|260813124|ref|XP_002601269.1| hypothetical protein BRAFLDRAFT_127515 [Branchiostoma floridae]
 gi|229286562|gb|EEN57281.1| hypothetical protein BRAFLDRAFT_127515 [Branchiostoma floridae]
          Length = 291

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 77/111 (69%), Gaps = 4/111 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN  L ELK L++ AL  +    SKLEKADILE+TV+HL+ ++RQ
Sbjct: 18  RKSSKPIMEKRRRARINESLTELKTLILEALNKDSSRHSKLEKADILEMTVKHLRNLQRQ 77

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           Q +A+   TD     ++R+GF+ C  EVS+ + S  G+D ++  +L++HL 
Sbjct: 78  Q-MAAAVSTDPSLLGKYRSGFSECMTEVSRVMGSMDGVDGQVKQRLINHLA 127


>gi|327282499|ref|XP_003225980.1| PREDICTED: transcription factor HES-1-like isoform 1 [Anolis
           carolinensis]
          Length = 289

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 83/119 (69%), Gaps = 4/119 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q    L+++P T   ++RAGF  C NEV++ L++  G++  + ++L+ HL   L ++
Sbjct: 93  RAQMTAALSADP-TVLGKYRAGFNECMNEVTRFLSTCEGVNTEVRSRLLGHLSTCLGQI 150


>gi|37576219|gb|AAQ93673.1| hairy G protein [Branchiostoma floridae]
          Length = 267

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 81/122 (66%), Gaps = 6/122 (4%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           IE   P    YQ RK  KP++E++RRARIN  L+ELK+L++   + +  + SKLEKADIL
Sbjct: 7   IESYAP----YQSRKSSKPLMEKRRRARINSSLNELKNLILDTYKNDSTHHSKLEKADIL 62

Query: 79  ELTVQHLQKMRRQQRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           E+ V+H++ ++RQQ  A+     A   R+RAG++ C  EV++ + +  G+D ++  KL++
Sbjct: 63  EIAVKHVRSLQRQQMAAAVSTDPAALGRYRAGYSRCRAEVARFMGTVDGVDPQVRQKLLN 122

Query: 137 HL 138
           HL
Sbjct: 123 HL 124


>gi|119598464|gb|EAW78058.1| hairy and enhancer of split 1, (Drosophila) [Homo sapiens]
          Length = 213

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|195123462|ref|XP_002006225.1| GI20925 [Drosophila mojavensis]
 gi|193911293|gb|EDW10160.1| GI20925 [Drosophila mojavensis]
          Length = 473

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 84/126 (66%), Gaps = 4/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + ++P     +F+ GF  CA EV++ ++   G++  +  +L +HL    N ++
Sbjct: 99  RQQLNMAIQTDPGV-VHKFKTGFVECAEEVNRYVSQMEGVEPGVRQRLSAHLNNCANSLE 157

Query: 147 KISPLS 152
           +I  +S
Sbjct: 158 QIGSMS 163


>gi|91092620|ref|XP_967694.1| PREDICTED: similar to GA21268-PA [Tribolium castaneum]
 gi|270012974|gb|EFA09422.1| hypothetical protein TcasGA2_TC005224 [Tribolium castaneum]
          Length = 371

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 84/123 (68%), Gaps = 5/123 (4%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+E+K L++ A+  +    SKLEKADILE+ V+HLQ ++
Sbjct: 23  ELRKTHKPIMEKRRRARINHCLNEIKTLILEAMNKDPARHSKLEKADILEMAVKHLQNVQ 82

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    +AS+P     +F++GF  CANE+ + ++ +  +D  L  ++ SHL + +N +D
Sbjct: 83  RQQLAVAMASDPSV-LRKFKSGFNECANEIDRFVSQS-EVDDGLKDRMRSHLQKCINGID 140

Query: 147 KIS 149
            ++
Sbjct: 141 HVA 143


>gi|148231512|ref|NP_001082161.1| transcription factor HES-4-B [Xenopus laevis]
 gi|82217015|sp|Q90VV1.1|HES4B_XENLA RecName: Full=Transcription factor HES-4-B; AltName: Full=Hairy and
           enhancer of split 4-B; AltName: Full=Protein hairy-2;
           Short=Xhairy2; AltName: Full=Protein hairy-2a;
           Short=Xhairy2b
 gi|13786059|gb|AAK39552.1|AF356000_1 basic helix-loop-helix transcription factor hairy2b [Xenopus
           laevis]
 gi|14488042|gb|AAK63842.1|AF383160_1 hairy2b [Xenopus laevis]
 gi|47124668|gb|AAH70547.1| LOC398258 protein [Xenopus laevis]
          Length = 277

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 82/119 (68%), Gaps = 4/119 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q    L ++P +   ++RAGF  C NEV++ L++  G++  + T+L+ HL   L ++
Sbjct: 93  RVQMTAALTADP-SVLGKYRAGFNECMNEVTRFLSTCEGVNTEVRTRLLGHLSSCLGQI 150


>gi|54292102|ref|NP_001005848.1| transcription factor HES-1 isoform 1 [Gallus gallus]
 gi|35397106|gb|AAP44728.1| c-hairy1A [Gallus gallus]
          Length = 290

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 91/148 (61%), Gaps = 12/148 (8%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 34  EHRKSSKPIMEKRRRARINESLGQLKMLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 93

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF  C NEV++ L++  G++  +  +L+ HL   L +  
Sbjct: 94  RAQMAAALSADP-SVLGKYRAGFNECMNEVTRFLSTCEGVNADVRARLLGHLSACLGQ-- 150

Query: 147 KISPLSVRVMDVCTPPPSPHSDTYSMPL 174
                 +  M+   PPP+      + PL
Sbjct: 151 ------IVAMNYLPPPPAGQPAHLAQPL 172


>gi|363895478|gb|AEW42994.1| Hes2 [Nematostella vectensis]
          Length = 183

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 14/184 (7%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++E+ RRARIN  L+ELK L++ +L  +    SK+EKADILE++VQ+L+++R+Q+  +
Sbjct: 4   KPLMEKMRRARINDSLNELKSLVLQSLNKDASRYSKMEKADILEMSVQYLKEIRKQEN-S 62

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLAS--TPGIDLRLGTKLMSHLGQ----RLNEMDKIS 149
            N       +RAGF  CA EV+K L +  +P  D +L + L++HL              +
Sbjct: 63  YNEAHSIAEYRAGFNYCAQEVTKNLTTLESPATD-KLRSNLLNHLANCFQGNTTPGAATT 121

Query: 150 PLSVRVMDVCTPPPSPHSDTYSMPLTPASSG-SSQVDTC---DYTSQYKMYESMPSPKSV 205
           P  V V    +PPPSP     S P++P SS  SS   T    + T+Q  +     S   +
Sbjct: 122 PSGVPVWIYPSPPPSPLH--VSPPISPLSSHVSSPPQTSLLQERTTQDMLTAVKTSTPQL 179

Query: 206 WRPW 209
           WRPW
Sbjct: 180 WRPW 183


>gi|45360927|ref|NP_988870.1| transcription factor HES-4 [Xenopus (Silurana) tropicalis]
 gi|82202542|sp|Q6PBD4.1|HES4_XENTR RecName: Full=Transcription factor HES-4; AltName: Full=Hairy and
           enhancer of split 4; AltName: Full=Protein hairy-2
 gi|37590942|gb|AAH59761.1| hairy and enhancer of split 4 [Xenopus (Silurana) tropicalis]
 gi|70608223|gb|AAZ04408.1| hairy2 [Xenopus (Silurana) tropicalis]
 gi|89268651|emb|CAJ82465.1| Helix-loop-helix DNA-binding domain protein with Hairy Orange
           domain, similar to hes1 [Xenopus (Silurana) tropicalis]
          Length = 281

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 82/119 (68%), Gaps = 4/119 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q    L ++P +   ++RAGF  C NEV++ L++  G++  + T+L+ HL   L ++
Sbjct: 93  RVQMTAALTADP-SVLGKYRAGFNECMNEVTRFLSTCEGVNTEVRTRLLGHLSSCLGQI 150


>gi|3913813|sp|O57337.1|HES1_CHICK RecName: Full=Transcription factor HES-1; AltName: Full=C-HAIRY1;
           AltName: Full=Hairy and enhancer of split 1
 gi|2674154|gb|AAB88691.1| c-hairy1 [Gallus gallus]
          Length = 290

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 97/162 (59%), Gaps = 16/162 (9%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 34  EHRKSSKPIMEKRRRARINESLGQLKMLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 93

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P +   ++RAGF  C NEV++ L++  G++  +  +L+ HL   L +  
Sbjct: 94  RAQMAAALSADP-SVLGKYRAGFNECMNEVTRFLSTCEGVNADVRARLLGHLSACLGQ-- 150

Query: 147 KISPLSVRVMDVCTPPPSPHSDTYSMP----LTPASSGSSQV 184
                 +  M+   PPP+      + P    L P ++G+  V
Sbjct: 151 ------IVAMNYLPPPPAGQPAHLAQPLHVQLPPTTTGAVPV 186


>gi|332017670|gb|EGI58356.1| Protein deadpan [Acromyrmex echinatior]
          Length = 457

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 93/139 (66%), Gaps = 9/139 (6%)

Query: 20  EQLQPISRT----YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKA 75
           E+L+P + +     + R+  KP++E++RRARIN+ LDELK+ ++ + + +    SKLEKA
Sbjct: 6   EELEPQTHSGMTKAELRRSNKPIMEKRRRARINQYLDELKNFILVS-EKDPTRHSKLEKA 64

Query: 76  DILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
           DILE+TV+H+Q M+RQQ    +A++PV    +FR+GF+ CA EVS+ +     +D  +  
Sbjct: 65  DILEMTVKHIQTMQRQQLSTAVANDPVV-LTKFRSGFSECATEVSRYINRLENVDPAIKQ 123

Query: 133 KLMSHLGQRLNEMDKISPL 151
           +L+SHL   ++ + +++P 
Sbjct: 124 RLVSHLNNCVSHLQQMAPF 142


>gi|444641|prf||1907283A hairy gene
          Length = 218

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 82/127 (64%), Gaps = 8/127 (6%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++E++RRARIN  L+ELK L++ A++ +    SKLEKADILE+TV+HLQ ++RQQ   
Sbjct: 3   KPIMEKRRRARINNSLNELKTLILDAMKKDPARHSKLEKADILEMTVKHLQNLQRQQAAM 62

Query: 96  SNPVTD---ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLS 152
             P TD     +FRAGF+ CA+EV +     PG+D  +  +L+ HL   LN+  K   + 
Sbjct: 63  WQP-TDPSVVSKFRAGFSECASEVGRF----PGLDPVVKRRLLQHLASCLNQGQKEPQVQ 117

Query: 153 VRVMDVC 159
           V V +V 
Sbjct: 118 VIVPEVA 124


>gi|348500561|ref|XP_003437841.1| PREDICTED: transcription factor HES-1-B-like [Oreochromis
           niloticus]
          Length = 247

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 101/176 (57%), Gaps = 4/176 (2%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  ESRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+   +P     ++RAGF+ C  EV++ L++  G++  + T+L+SHL   + +++
Sbjct: 93  RLQMTAAANTDPFV-LGKYRAGFSECVGEVTRFLSTCEGVNTEVRTRLLSHLAACVTQIN 151

Query: 147 KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSP 202
            ++     +  V     S      S+P  P  S S      +    Y  ++ +P+P
Sbjct: 152 AMNFYGPHLGAVGLGQTSTQIPVSSVPQMPCKSSSLMHAPPESMKLYGGFQVVPTP 207


>gi|195454104|ref|XP_002074088.1| GK12804 [Drosophila willistoni]
 gi|194170173|gb|EDW85074.1| GK12804 [Drosophila willistoni]
          Length = 183

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 104/190 (54%), Gaps = 23/190 (12%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +L+KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRLDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 70  MRKQVIKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 128

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPK- 203
           M       ++       P     ++   P++PASSG        Y S  +  ++ PSPK 
Sbjct: 129 M-------LQGDQQQQQPQQSQLESTGRPISPASSG--------YHSDAEESDAAPSPKP 173

Query: 204 ----SVWRPW 209
               S+WRPW
Sbjct: 174 EATNSMWRPW 183


>gi|7955|emb|CAA34554.1| unnamed protein product [Drosophila melanogaster]
          Length = 179

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 106/195 (54%), Gaps = 23/195 (11%)

Query: 22  LQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELT 81
           ++  ++T  Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  
Sbjct: 1   MEYTTKTQIYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESA 58

Query: 82  VQHLQKMRRQQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG- 139
           V  +++ +  +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG 
Sbjct: 59  VIFMRQQKTPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGR 118

Query: 140 -----QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYK 194
                Q+ +E    +      MD  +   +        PL+PASSG      CD      
Sbjct: 119 VYKNLQQFHEAQSAADFIQNSMDCSSMDKA--------PLSPASSGYH--SDCDSPPP-- 166

Query: 195 MYESMPSPKSVWRPW 209
                P  + +WRPW
Sbjct: 167 --TPQPMQQPLWRPW 179


>gi|221220414|gb|ACM08868.1| Transcription factor HES-1 [Salmo salar]
          Length = 267

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 85/121 (70%), Gaps = 2/121 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK+L++ AL+ +    SKLEKADILE+TV+HL+ M+
Sbjct: 33  EHRKSSKPIMEKRRRARINDSLGQLKNLILDALKKDSSRHSKLEKADILEMTVKHLRNMQ 92

Query: 90  RQQRLA--SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDK 147
           R Q  A  S   +   ++RAGF+ C +EV+  L++  G++  + ++L+SHL   +++++ 
Sbjct: 93  RLQMTAAISRDPSVFGKYRAGFSECMSEVTSFLSTCGGVNTEIRSQLLSHLAGCVSQINT 152

Query: 148 I 148
           +
Sbjct: 153 L 153


>gi|88698206|gb|ABD48946.1| hairy protein [Capitella teleta]
          Length = 243

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 82/122 (67%), Gaps = 4/122 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN  L +LK L++ AL+ +    SKLEK+DILELTV+HL+ ++ Q
Sbjct: 19  RRNSKPLMEKRRRARINASLHQLKVLVLDALKKDSARFSKLEKSDILELTVKHLKSIQGQ 78

Query: 92  Q---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
                +A++P T A RF +GF+ CA EVS+ L+S    D  +  +L++HL + L++    
Sbjct: 79  HMSAAMATDP-TVATRFHSGFSECAREVSRYLSSVDNFDESIRGRLLNHLNRCLHQYPPA 137

Query: 149 SP 150
           SP
Sbjct: 138 SP 139


>gi|307170617|gb|EFN62801.1| Protein deadpan [Camponotus floridanus]
          Length = 459

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 92/144 (63%), Gaps = 6/144 (4%)

Query: 12  MINNTVDIE-QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVS 70
           M+N+  + E Q Q      + R+  KP++E++RRARIN+ LDELK+ ++   + +    S
Sbjct: 1   MLNSEEEFESQTQSAMSKAELRRSNKPIMEKRRRARINQYLDELKNFILVN-EKDPTRHS 59

Query: 71  KLEKADILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGID 127
           KLEKADILE+TV+H+Q M+RQ     ++++PV    +FR+GF+ CA EVS+ ++    +D
Sbjct: 60  KLEKADILEMTVKHIQTMQRQHLSTAISNDPVV-LTKFRSGFSECATEVSRYVSRLENVD 118

Query: 128 LRLGTKLMSHLGQRLNEMDKISPL 151
             +  +L+SHL   +  + +++P 
Sbjct: 119 PAVKQRLLSHLNSCVGHLQQMAPF 142


>gi|18858803|ref|NP_571948.1| transcription factor HES-1 [Danio rerio]
 gi|10834823|gb|AAG23838.1|AF301264_1 bHLH-WRPW transcription factor [Danio rerio]
 gi|50925997|gb|AAH79516.1| Hairy-related 9 [Danio rerio]
          Length = 291

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 82/121 (67%), Gaps = 8/121 (6%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLASNPVTDAD-----RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           R Q  A+     AD     ++RAGF  C NEV++ L++  G++  + ++L++HL   + +
Sbjct: 93  RVQMSAA---LSADTNVLSKYRAGFNECMNEVTRFLSTCEGVNTEVRSRLLNHLSGCMGQ 149

Query: 145 M 145
           M
Sbjct: 150 M 150


>gi|47227946|emb|CAF97575.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 248

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 82/120 (68%), Gaps = 4/120 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++R 
Sbjct: 36  RKSSKPIMEKRRRARINESLGQLKTLIMEALRKDSSRHSKLEKADILEMTVKHLRNLQRL 95

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
           Q +A+   TD     ++RAGF+ C  EV++ L++  G+   + T+L+SHL   + +++ +
Sbjct: 96  Q-MAAAVTTDPSFLGKYRAGFSECVGEVTRFLSTCEGVHSEVRTRLLSHLASCVTQINNL 154


>gi|355694516|gb|AER99695.1| hairy and enhancer of split 4 [Mustela putorius furo]
          Length = 116

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 80/113 (70%), Gaps = 4/113 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 1   EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 60

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           R Q    L+++P     ++RAGF+ C NEV++ L++  G++  + T+L+ HL 
Sbjct: 61  RAQMTAALSTDPSV-LGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLA 112


>gi|204555|gb|AAA41307.1| hairy [Rattus norvegicus]
          Length = 281

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 85/123 (69%), Gaps = 4/123 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVNHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
             Q    L+++P +   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  WAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KIS 149
            ++
Sbjct: 152 AMT 154


>gi|194353804|emb|CAK50840.1| hairy protein [Glomeris marginata]
          Length = 265

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 18/118 (15%)

Query: 45  ARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ------------ 92
           ARIN CLDELK L++   Q E  + SKLEKADILELTVQHL+++R Q             
Sbjct: 1   ARINNCLDELKALIMETAQTENSDASKLEKADILELTVQHLRRLRTQNRSSWTSAPSSPS 60

Query: 93  -----RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
                R+  +P +D DRFRAGF+ C  EVS  +++  G+D  L  +L++HL Q +  M
Sbjct: 61  SPSSTRVPGHP-SDIDRFRAGFSECVREVSTYVSAINGVDTDLRVRLLAHLAQCIGTM 117


>gi|259013446|ref|NP_001158466.1| hairy and enhancer of split 1 [Saccoglossus kowalevskii]
 gi|197320553|gb|ACH68438.1| hairy protein [Saccoglossus kowalevskii]
          Length = 316

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 4/128 (3%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           +P S+  + RK  KP++E++RRARIN  L +LK L++ A++ +    SKLEKADILE+TV
Sbjct: 5   KPASKASENRKSSKPIMEKRRRARINESLSQLKTLILDAMKKDSSRHSKLEKADILEMTV 64

Query: 83  QHLQKMRRQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++LQ ++RQQ  A+   +P T   ++RAGF  C  EV + L S  G+     ++L+ HL 
Sbjct: 65  KYLQNVQRQQMGAALNQDP-TVLSKYRAGFNECFGEVQRYLTSVEGVGTDTRSRLLGHLA 123

Query: 140 QRLNEMDK 147
                M +
Sbjct: 124 NCCQNMSQ 131


>gi|449268470|gb|EMC79334.1| Transcription factor HES-1, partial [Columba livia]
          Length = 225

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 80/113 (70%), Gaps = 4/113 (3%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ--- 92
           KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++R Q   
Sbjct: 4   KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTA 63

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
            L+++P T   ++RAGF  C NEV++ L++  G++  + T+L+SHL   L ++
Sbjct: 64  ALSADP-TVLGKYRAGFNECMNEVTRFLSTCEGVNTDVRTRLLSHLSACLGQI 115


>gi|195038353|ref|XP_001990624.1| GH18145 [Drosophila grimshawi]
 gi|193894820|gb|EDV93686.1| GH18145 [Drosophila grimshawi]
          Length = 187

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 15/189 (7%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +L+KA++LE ++  
Sbjct: 10  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRLDKAEMLEASLLF 67

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +PV   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 68  MRKQLIKQQAPVSPVP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGMEFQR 126

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPK- 203
           M +                   S   S P +PASSG        Y S  +  E+  SP+ 
Sbjct: 127 MLQSDQPQNEQQQQQQQQIKLASSPISRPGSPASSG--------YHSDAEGSEAATSPQP 178

Query: 204 ---SVWRPW 209
               +WRPW
Sbjct: 179 ASNPMWRPW 187


>gi|156395390|ref|XP_001637094.1| predicted protein [Nematostella vectensis]
 gi|156224203|gb|EDO45031.1| predicted protein [Nematostella vectensis]
          Length = 254

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 80/112 (71%), Gaps = 5/112 (4%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KPM+E++RRARIN+ L+ELK L++ A++ +    SKLEKADILE+TV++L+ M+  
Sbjct: 18  RKSSKPMMEKRRRARINQSLNELKILILEAMKKDTSCYSKLEKADILEMTVKYLRAMKTT 77

Query: 92  QRLA----SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           Q+L     S+P + A ++RAGF  CA EV++   +   +DL++ T+++SHL 
Sbjct: 78  QQLTGIVPSDPSSVA-QYRAGFNECALEVTRYFMANDNVDLQMKTRILSHLA 128


>gi|241074193|ref|XP_002408712.1| transcription factor hes-1, putative [Ixodes scapularis]
 gi|215492545|gb|EEC02186.1| transcription factor hes-1, putative [Ixodes scapularis]
          Length = 199

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 75/111 (67%), Gaps = 4/111 (3%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           + +  KP++E++RRARIN+CL ELK L++ AL  +    SKLEKADILE+TV+HLQ ++R
Sbjct: 13  FVQATKPIMEKRRRARINQCLTELKALILDALNKDPSRHSKLEKADILEMTVRHLQNVQR 72

Query: 91  QQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           QQ    LA++P     +FRAGF  CA EVS+ +     ++  L  +L+ HL
Sbjct: 73  QQMTAALATDPAV-MGKFRAGFAECATEVSRYVTRLESVEPHLRQRLVGHL 122


>gi|195381783|ref|XP_002049624.1| GJ20653 [Drosophila virilis]
 gi|194144421|gb|EDW60817.1| GJ20653 [Drosophila virilis]
          Length = 555

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 81/120 (67%), Gaps = 4/120 (3%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ--- 92
           KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++RQQ   
Sbjct: 140 KPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQRQQLNM 199

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLS 152
            + ++P     +F+ GF  CA EV++ ++   GI+  +  +L +HL    N +++I  +S
Sbjct: 200 AIQTDPGV-VHKFKTGFVECAEEVNRYVSQMDGIEPGVRQRLSAHLNNCANSLEQIGSMS 258


>gi|195392874|ref|XP_002055079.1| GJ18995 [Drosophila virilis]
 gi|194149589|gb|EDW65280.1| GJ18995 [Drosophila virilis]
          Length = 146

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 11/124 (8%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +SR++QYRKVMKP+LERKRRARINR LDELK L+V  +Q + E +SKLEKADILELTV H
Sbjct: 13  VSRSHQYRKVMKPLLERKRRARINRYLDELKQLIVEVVQLDEETLSKLEKADILELTVHH 72

Query: 85  LQKMRRQQ---RLASNPV-----TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           L +  +     R +  P+          F  G   C  EV + L      D++L +K + 
Sbjct: 73  LHRQLKAAIIPRQSEGPIHLETWHSFQHFAFGSQQCILEVVRFLHPH---DMQLNSKFLR 129

Query: 137 HLGQ 140
            + Q
Sbjct: 130 AMQQ 133


>gi|327282501|ref|XP_003225981.1| PREDICTED: transcription factor HES-1-like isoform 2 [Anolis
           carolinensis]
          Length = 304

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 81/119 (68%), Gaps = 4/119 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q  K  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 48  QSSKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 107

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           R Q    L+++P T   ++RAGF  C NEV++ L++  G++  + ++L+ HL   L ++
Sbjct: 108 RAQMTAALSADP-TVLGKYRAGFNECMNEVTRFLSTCEGVNTEVRSRLLGHLSTCLGQI 165


>gi|37576209|gb|AAQ93668.1| hairy B protein [Branchiostoma floridae]
 gi|89242912|gb|ABD64729.1| AmphiHairyB [Branchiostoma floridae]
          Length = 271

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 17/185 (9%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           + R  + RK  KP++E++RRARIN  L++LK L++  L+ +  + SKLEKADILE+TV+H
Sbjct: 14  VKRPGESRKSSKPIMEKRRRARINDSLNQLKALILADLKKDSSH-SKLEKADILEMTVKH 72

Query: 85  LQKMRRQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           L+ ++RQQ  A+   NP     ++RAGF  C  EV++ L ++  +D ++  +L++HL   
Sbjct: 73  LRSLQRQQLTAAANTNPALPG-QYRAGFNECLMEVNRFLGASDSVDTQVRQRLLNHLA-- 129

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVD------TCDYTSQYKM 195
                  SP          P   PH+    + +  A +G   V        C    Q  M
Sbjct: 130 ----GACSPARPGTYPAAQPTVFPHAQPVQVQVPVAPTGGQHVQLSPVQAPCPQAGQTTM 185

Query: 196 YESMP 200
           Y  +P
Sbjct: 186 YGGIP 190


>gi|307170625|gb|EFN62809.1| Protein hairy [Camponotus floridanus]
          Length = 361

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 84/123 (68%), Gaps = 8/123 (6%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN  L++LK L++ +++ +    SKLEKADILELTV+HL+
Sbjct: 45  RSGENRRSNKPIMEKRRRARINSSLNDLKTLVLESMKKDPARHSKLEKADILELTVKHLE 104

Query: 87  KMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
            ++RQQ     A+NP +  ++FRAG++ C  EV+K     PG+D  +  +LM+HL   L 
Sbjct: 105 NLQRQQIAMATATNP-SILNKFRAGYSECVAEVNKF----PGLDAVVKRRLMAHLASCLG 159

Query: 144 EMD 146
            ++
Sbjct: 160 PVE 162


>gi|195038359|ref|XP_001990627.1| GH19459 [Drosophila grimshawi]
 gi|193894823|gb|EDV93689.1| GH19459 [Drosophila grimshawi]
          Length = 193

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 47/210 (22%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+T  Y+KV KP+LER+RRARIN+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   SKTEIYQKVKKPLLERQRRARINKCLDTLKTL-VADLRGD-DGILRMDKAEMLESAVVFM 62

Query: 86  QKMRRQQRLA--------------------SNPVTDADRFRAGFTTCANEVSKCLASTPG 125
               RQQ++                     ++P    + FR G+    NEVS+ +ASTPG
Sbjct: 63  ----RQQKMGKSVAATATATPTTKTTTATTTSPAMPLENFRNGYMNAVNEVSRVMASTPG 118

Query: 126 IDLRLGTKLMSHLG---QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSS 182
           + + LG  +MSHLG   + L +  K   +S    ++         +  S PL+PASSG  
Sbjct: 119 MSVDLGKSVMSHLGRIYKNLQQFHKAQTMSESESELSM-------NCNSAPLSPASSG-- 169

Query: 183 QVDTCDYTSQYKMYESMPSP---KSVWRPW 209
                 Y S  +     P P   + +WRPW
Sbjct: 170 ------YHSDCESPAPSPMPVEAEKLWRPW 193


>gi|195389630|ref|XP_002053479.1| GJ23319 [Drosophila virilis]
 gi|194151565|gb|EDW66999.1| GJ23319 [Drosophila virilis]
          Length = 184

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 26/193 (13%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +L+KA++LE  +  
Sbjct: 10  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRLDKAEMLEAALVF 67

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +PV   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 68  MRKQLIKQQAPVSPVP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGIEFQR 126

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPL----TPASSGSSQVDTCDYTSQYKMYESMP 200
           M +      +     T       +  SMP+    +PASSG        Y S  +  E+  
Sbjct: 127 MLQADQQPEQHQQQQT-------ELESMPISRSASPASSG--------YHSDAEDSEAAV 171

Query: 201 SPK----SVWRPW 209
           SP+    S+WRPW
Sbjct: 172 SPQSGSHSMWRPW 184


>gi|195454110|ref|XP_002074091.1| GK14460 [Drosophila willistoni]
 gi|194170176|gb|EDW85077.1| GK14460 [Drosophila willistoni]
          Length = 191

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 102/198 (51%), Gaps = 25/198 (12%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KP+LER+RRARIN+CLD LK L+      +G  + +L+KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPLLERQRRARINKCLDTLKTLVAEMRGDDG--ILRLDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLASNPVTDA--------DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSH 137
           ++ + ++   +     A        D FR G+    NEVS+ +ASTPG+ + LG  +M+H
Sbjct: 63  RQEKAKKLTQTPATAAAEPATTLPLDSFRHGYMNAVNEVSRVMASTPGMSVDLGKSVMTH 122

Query: 138 LGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYE 197
           LG+    + +            T   +        PL+PASSG    D C        YE
Sbjct: 123 LGRIYKNLQQFHEAQATAAVTSTAATTTTQTMSECPLSPASSG-YHSDDC--------YE 173

Query: 198 S-MPSPK-----SVWRPW 209
           S  PSP+      +WRPW
Sbjct: 174 SPAPSPQPMECEKLWRPW 191


>gi|156230125|gb|AAI52286.1| Hairy-related 9 [Danio rerio]
          Length = 291

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 81/121 (66%), Gaps = 8/121 (6%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQRLASNPVTDAD-----RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           R Q  A+     AD     ++RAGF  C NEV++ L++  G++  + ++L +HL   + +
Sbjct: 93  RVQMSAA---LSADTNVLSKYRAGFNECMNEVTRFLSTCEGVNTEVRSRLPNHLSGCMGQ 149

Query: 145 M 145
           M
Sbjct: 150 M 150


>gi|355763108|gb|EHH62115.1| hypothetical protein EGM_20322, partial [Macaca fascicularis]
          Length = 185

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 84/122 (68%), Gaps = 4/122 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF+ C  EV++ L++  G++  + T+L+ HL   + +++
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGFSECMIEVTRFLSTCEGVNTEVRTRLLGHLANCMTQIN 151

Query: 147 KI 148
            +
Sbjct: 152 AM 153


>gi|307196842|gb|EFN78278.1| Protein hairy [Harpegnathos saltator]
          Length = 353

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 80/122 (65%), Gaps = 6/122 (4%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R+ + R+  KP++E++RRARIN  L++LK L++ A++ +    SKLEKADILE+ V+H++
Sbjct: 37  RSSENRRSNKPIMEKRRRARINNSLNDLKTLVLDAMKKDPSRHSKLEKADILEMAVKHME 96

Query: 87  KMRRQQRL--ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
            ++RQ     AS   T  ++FRAGFT CA+EV K     PG+D  +  +L++HL   +  
Sbjct: 97  NLQRQSVALTASADPTILNKFRAGFTECASEVGKF----PGLDTSVKRRLLAHLASCIGP 152

Query: 145 MD 146
            D
Sbjct: 153 AD 154


>gi|144227378|gb|ABO93449.1| hairy-enhancer-of-split 1 [Strigamia maritima]
          Length = 219

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 83/130 (63%), Gaps = 11/130 (8%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+  + R+  KP++E++RRARIN  L ELK L++ A++ +    SKLEKADILE+TV++L
Sbjct: 9   SKASEARRSNKPLMEKRRRARINHSLTELKTLILNAVKKDNSKHSKLEKADILEMTVKYL 68

Query: 86  QKMRRQQRLASNPVTDAD-------RFRAGFTTCANEVSKCLASTPG-IDLRLGTKLMSH 137
           Q ++RQQ  AS    D+D       +F AG+  CANEV++ L    G +D    T L++H
Sbjct: 69  QNLQRQQLTAS---ADSDTSSLTSTKFSAGYGECANEVTRYLEGGEGHVDATARTHLINH 125

Query: 138 LGQRLNEMDK 147
           L + +N + +
Sbjct: 126 LSRCMNGLKR 135


>gi|260793446|ref|XP_002591723.1| hypothetical protein BRAFLDRAFT_265744 [Branchiostoma floridae]
 gi|229276932|gb|EEN47734.1| hypothetical protein BRAFLDRAFT_265744 [Branchiostoma floridae]
          Length = 334

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 23/159 (14%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           SR  + RK  KP++E++RRARIN  L++LK L++ AL+ +    SKLEKADILE+TV+HL
Sbjct: 7   SRPSEGRKSSKPIMEKRRRARINDSLNQLKTLILDALKKDSSRHSKLEKADILEMTVKHL 66

Query: 86  QKMRRQQRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           + ++RQ  +A+   TD +   ++RAGF  C  EVS  L S   ++  +  +L++HL    
Sbjct: 67  RNLQRQH-VAAAVSTDPNVLGQYRAGFNECMTEVSSFLGSASTVETEVHQRLLNHLAGCC 125

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMP-LTPASSG 180
           + +                  SP + TY+ P + PA+SG
Sbjct: 126 HTV------------------SPVTSTYTSPTVPPAASG 146


>gi|139152641|gb|ABO77131.1| hairy-enhancer-of-split 4 [Strigamia maritima]
          Length = 262

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 84/124 (67%), Gaps = 4/124 (3%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++    R+  KP++E++RRARIN CL++LK L++ A++ +    SKLEKADILE+TV++
Sbjct: 5   MNKNADNRRSNKPIMEKRRRARINSCLNDLKTLILEAMKKDPSRHSKLEKADILEMTVKY 64

Query: 85  LQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           LQ ++RQQ    +A++P    +++RAGF  CA EVS+ ++    ID  + T L++HL   
Sbjct: 65  LQNLQRQQIALTMATDPQI-INKYRAGFGECATEVSRYVSRLDTIDPHMRTGLLNHLSTC 123

Query: 142 LNEM 145
           L  +
Sbjct: 124 LTSI 127


>gi|57086869|ref|XP_546724.1| PREDICTED: transcription factor HES-4 [Canis lupus familiaris]
          Length = 225

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 4/120 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ A + +    SKLEKADILE+TV+HLQ +R
Sbjct: 33  EHRKSSKPVMEKRRRARINESLAQLKTLILDAFRKDSSRHSKLEKADILEMTVRHLQSLR 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 93  RVQVTAALSADPAV-LGKYRAGFNECLAEVNRFLAGCEGVPAEVRSRLLGHLAACLGQLG 151


>gi|290562768|gb|ADD38779.1| Enhancer of split mbeta protein [Lepeophtheirus salmonis]
          Length = 80

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/54 (77%), Positives = 53/54 (98%)

Query: 24 PISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
          P+SRTYQYRK+MKP+LERKRRARIN+CLD+LKD+MV+ LQAEGE+++KLEKAD+
Sbjct: 27 PMSRTYQYRKIMKPLLERKRRARINKCLDDLKDIMVSYLQAEGESITKLEKADV 80


>gi|125807140|ref|XP_001360283.1| GA21268 [Drosophila pseudoobscura pseudoobscura]
 gi|54635455|gb|EAL24858.1| GA21268 [Drosophila pseudoobscura pseudoobscura]
          Length = 450

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 83/126 (65%), Gaps = 5/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + ++P     +F+ GF  CA EV++ ++    +D  +  +L +HL    N ++
Sbjct: 99  RQQLNMAIQTDPGV-VQKFKTGFVECAEEVNRYVSQL-DVDTGVRQRLNAHLNNCANSLE 156

Query: 147 KISPLS 152
           +I  +S
Sbjct: 157 QIGSMS 162


>gi|37576215|gb|AAQ93671.1| hairy E protein [Branchiostoma floridae]
          Length = 345

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 23/159 (14%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           SR  + RK  KP++E++RRARIN  L++LK L++ AL+ +    SKLEKADILE+TV+HL
Sbjct: 7   SRPSEGRKSSKPIMEKRRRARINDSLNQLKTLILDALKKDSSRHSKLEKADILEMTVKHL 66

Query: 86  QKMRRQQRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           + ++RQ  +A+   TD +   ++RAGF  C  EVS  L S   ++  +  +L++HL    
Sbjct: 67  RNLQRQH-VAAAVSTDPNVLGQYRAGFNECMTEVSSFLGSASTVETEVHQRLLNHLAGCC 125

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMP-LTPASSG 180
           + +                  SP + TY+ P + PA+SG
Sbjct: 126 HTV------------------SPVTSTYTSPTVPPAASG 146


>gi|195149518|ref|XP_002015704.1| GL10878 [Drosophila persimilis]
 gi|194109551|gb|EDW31594.1| GL10878 [Drosophila persimilis]
          Length = 439

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 83/126 (65%), Gaps = 5/126 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E++RRARIN CL+ELK L++ A++ +    +KLEKADILE+TV+HLQ ++
Sbjct: 39  ELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           RQQ    + ++P     +F+ GF  CA EV++ + S   +D  +  +L +HL    N ++
Sbjct: 99  RQQLNMAIQTDPGV-VQKFKTGFVECAEEVNRYV-SQLDVDTGVRQRLNAHLNNCANSLE 156

Query: 147 KISPLS 152
           +I  +S
Sbjct: 157 QIGSMS 162


>gi|260841530|ref|XP_002613965.1| hypothetical protein BRAFLDRAFT_118470 [Branchiostoma floridae]
 gi|229299355|gb|EEN69974.1| hypothetical protein BRAFLDRAFT_118470 [Branchiostoma floridae]
          Length = 261

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 84/124 (67%), Gaps = 4/124 (3%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE--GENVSKLEKAD 76
           +E++   S  +Q RK  KP++E++RRARIN  L+ELK+L++  ++ +    + SKLEKAD
Sbjct: 3   VEKVVGNSSPHQGRKSSKPLMEKRRRARINSSLNELKNLILGTVKDDINAPHHSKLEKAD 62

Query: 77  ILELTVQHLQKMRRQQRLA--SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
           ILE+ V+H++ ++RQQ  A  S   T   R+RAG++ C  EV++ + +  G+D ++  KL
Sbjct: 63  ILEIAVKHVRSLQRQQMAAAVSTDPTALGRYRAGYSRCRAEVARFMGTVDGVDPQVRQKL 122

Query: 135 MSHL 138
           ++HL
Sbjct: 123 LNHL 126


>gi|114550511|ref|XP_001143332.1| PREDICTED: transcription factor HES-4 isoform 2 [Pan troglodytes]
 gi|332870375|ref|XP_003319000.1| PREDICTED: transcription factor HES-4-like [Pan troglodytes]
          Length = 221

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 4/120 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HL+ +R
Sbjct: 33  EHRKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLR 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 93  RVQVTAALSADPAV-LGKYRAGFHECLAEVNRFLAGCKGVPADVRSRLLGHLAACLRQLG 151


>gi|45383217|ref|NP_989803.1| transcription factor HES-1 isoform 2 [Gallus gallus]
 gi|35397108|gb|AAP44729.1| c-hairy1B [Gallus gallus]
          Length = 304

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 12/142 (8%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ--- 92
           KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++R Q   
Sbjct: 54  KPIMEKRRRARINESLGQLKMLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMAA 113

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLS 152
            L+++P +   ++RAGF  C NEV++ L++  G++  +  +L+ HL   L +        
Sbjct: 114 ALSADP-SVLGKYRAGFNECMNEVTRFLSTCEGVNADVRARLLGHLSACLGQ-------- 164

Query: 153 VRVMDVCTPPPSPHSDTYSMPL 174
           +  M+   PPP+      + PL
Sbjct: 165 IVAMNYLPPPPAGQPAHLAQPL 186


>gi|195110345|ref|XP_001999742.1| GI22907 [Drosophila mojavensis]
 gi|193916336|gb|EDW15203.1| GI22907 [Drosophila mojavensis]
          Length = 183

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 11/185 (5%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +L+KA++LE  +  
Sbjct: 10  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRLDKAEMLEAALVF 67

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +PV   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 68  MRKQLIKQQAPVSPV-PMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGIEFQR 126

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKS 204
           M +      +         SP     S P++PASSG          +        PS   
Sbjct: 127 MLQADQPQQQQQQQSKLESSP----ISRPVSPASSGYHSDAEASDAAA----SPQPSSNP 178

Query: 205 VWRPW 209
           +WRPW
Sbjct: 179 MWRPW 183


>gi|10863967|ref|NP_066993.1| transcription factor HES-4 isoform 2 [Homo sapiens]
 gi|34098717|sp|Q9HCC6.1|HES4_HUMAN RecName: Full=Transcription factor HES-4; Short=hHES4; AltName:
           Full=Class B basic helix-loop-helix protein 42;
           Short=bHLHb42; AltName: Full=Hairy and enhancer of split
           4; AltName: Full=bHLH factor Hes4
 gi|10121150|dbj|BAB13510.1| bHLH factor Hes4 [Homo sapiens]
 gi|15214449|gb|AAH12351.1| Hairy and enhancer of split 4 (Drosophila) [Homo sapiens]
 gi|119576700|gb|EAW56296.1| hairy and enhancer of split 4 (Drosophila) [Homo sapiens]
 gi|123997629|gb|ABM86416.1| hairy and enhancer of split 4 (Drosophila) [synthetic construct]
          Length = 221

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 4/120 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HL+ +R
Sbjct: 33  EHRKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLR 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 93  RVQVTAALSADPAV-LGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLG 151


>gi|7671520|emb|CAB89491.1| DNA-binding-protein hairy [Cupiennius salei]
          Length = 335

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 83/125 (66%), Gaps = 4/125 (3%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++  + R+  KP++E++RRARIN  L ELK+L++ AL+ +    SKLEKADILE+TV+H
Sbjct: 53  VTKCSETRRSTKPIMEKRRRARINNSLSELKNLILDALKKDNARHSKLEKADILEMTVKH 112

Query: 85  LQKMRRQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           LQ ++ QQ+      +P   A +FRAGF  CANEV++ + S  GID  +  +L++HL   
Sbjct: 113 LQNLQMQQQQQQLTPDPSMMA-KFRAGFAECANEVNRFMGSMEGIDHTIRQRLLNHLANC 171

Query: 142 LNEMD 146
           L  M 
Sbjct: 172 LTGMS 176


>gi|350585514|ref|XP_003481977.1| PREDICTED: transcription factor HES-4-like [Sus scrofa]
          Length = 228

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 76/118 (64%), Gaps = 4/118 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HLQ +RR 
Sbjct: 35  RKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLQSLRRV 94

Query: 92  Q---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           Q    L+++P     ++RAGF  C  EV++ L    G+   + ++L+ HL   L ++ 
Sbjct: 95  QVTAALSADPAV-LGKYRAGFNECLAEVNRFLVGCEGVPADVRSRLLGHLAACLGQLG 151


>gi|426327349|ref|XP_004024481.1| PREDICTED: transcription factor HES-4 [Gorilla gorilla gorilla]
          Length = 208

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 4/120 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HL+ +R
Sbjct: 20  EHRKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLR 79

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 80  RVQVTAVLSADPAV-LGKYRAGFHECLEEVNRFLAGCEGVPADVRSRLLGHLAACLRQLG 138


>gi|77454918|gb|ABA86268.1| CG8365 [Drosophila melanogaster]
          Length = 166

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 17/157 (10%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +++ + 
Sbjct: 3   YQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFMRQQKT 60

Query: 91  QQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG------QRLN 143
            +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG      Q+ +
Sbjct: 61  PKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQQFH 120

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSG 180
           E    +      MD         S     PL+PASSG
Sbjct: 121 EAQSAADFIQNSMDC--------SSMDKAPLSPASSG 149


>gi|149411419|ref|XP_001511924.1| PREDICTED: transcription factor HES-1-A-like [Ornithorhynchus
           anatinus]
          Length = 287

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 81/115 (70%), Gaps = 4/115 (3%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ---RL 94
           ++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++R Q    L
Sbjct: 23  IMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAAL 82

Query: 95  ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
           +S+P T   ++RAGF+ C NEV++ L++  G++  + T+L+ HL   + +++ ++
Sbjct: 83  SSDP-TVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMN 136


>gi|402912749|ref|XP_003918907.1| PREDICTED: transcription factor HES-4 [Papio anubis]
          Length = 221

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 4/120 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HL+ +R
Sbjct: 33  EHRKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLR 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q    L+++P     ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 93  RVQVTAALSADPAV-LGKYRAGFHECLAEVNRFLADCEGVPADVRSRLLGHLAACLRQLG 151


>gi|260841534|ref|XP_002613967.1| hypothetical protein BRAFLDRAFT_116862 [Branchiostoma floridae]
 gi|229299357|gb|EEN69976.1| hypothetical protein BRAFLDRAFT_116862 [Branchiostoma floridae]
          Length = 268

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 80/124 (64%), Gaps = 8/124 (6%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV--SKLEKAD 76
           IE   P    YQ RK  KP++E++RRARIN  L+ELK+L++   + +  +   SKLEKAD
Sbjct: 7   IESYAP----YQSRKSSKPLMEKRRRARINSSLNELKNLILDTYKNDVNSTSHSKLEKAD 62

Query: 77  ILELTVQHLQKMRRQQRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
           ILE+ V+H++ ++RQQ  A+     A   R+RAG+  C  EV++ + +  G+D ++  KL
Sbjct: 63  ILEIAVKHVRSLQRQQMAAAVSTDPAALGRYRAGYGRCRAEVARFMGTADGVDPQVRQKL 122

Query: 135 MSHL 138
           ++HL
Sbjct: 123 LNHL 126


>gi|118343733|ref|NP_001071685.1| transcription factor protein [Ciona intestinalis]
 gi|70569310|dbj|BAE06388.1| transcription factor protein [Ciona intestinalis]
          Length = 522

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 86/127 (67%), Gaps = 5/127 (3%)

Query: 25  ISRTYQYR-KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQ 83
           +  TY  R K  KP++E++RRARIN  L+ELK +++ AL+ +    SKLEKADILE+TV+
Sbjct: 23  LGGTYIERQKSSKPIMEKRRRARINSSLNELKSILLEALKKDSTRHSKLEKADILEMTVK 82

Query: 84  HLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           +L+ + RQ+    L+ +P  + ++++AGF  C NEV + L++  G+ + + T+L++HL  
Sbjct: 83  YLKNVERQRLSVSLSIDPA-EINQYKAGFNECRNEVMRFLSTCEGVTVDVRTRLLNHLAT 141

Query: 141 RLNEMDK 147
            L+ + K
Sbjct: 142 CLHSIQK 148


>gi|77454924|gb|ABA86271.1| CG8365 [Drosophila yakuba]
 gi|77454926|gb|ABA86272.1| CG8365 [Drosophila yakuba]
          Length = 166

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 23/160 (14%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +++ + 
Sbjct: 3   YQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFMRQQKT 60

Query: 91  QQRLA----SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG------Q 140
            +++A    S P+   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG      Q
Sbjct: 61  TKKVAREEQSLPL---DSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQ 117

Query: 141 RLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSG 180
           + +E    +      MD         S     PL+PASSG
Sbjct: 118 QFHEAQSATDFLQNSMDC--------SSMDKAPLSPASSG 149


>gi|77454928|gb|ABA86273.1| CG8365 [Drosophila erecta]
          Length = 166

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 17/157 (10%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +++ + 
Sbjct: 3   YQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFMRQQKT 60

Query: 91  QQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG------QRLN 143
            ++++    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG      Q+ +
Sbjct: 61  TKKVSQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQQFH 120

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSG 180
           E    +      MD         S     PL+PASSG
Sbjct: 121 EAQSATDFIQNTMDC--------SSMDKAPLSPASSG 149


>gi|443721523|gb|ELU10814.1| hypothetical protein CAPTEDRAFT_223641 [Capitella teleta]
          Length = 346

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 77/111 (69%), Gaps = 2/111 (1%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RR RIN+CLD+LK +++   + E    SKLEKADILE+TV++L+ M++ 
Sbjct: 34  RKSNKPLMEKRRRERINKCLDQLKAILMEVTKKESSYYSKLEKADILEMTVKYLKNMKKP 93

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           Q ++++P     ++ AGF  C++EV+K L++  G+   +  +++SHL   L
Sbjct: 94  Q-VSTDPAV-LSKYVAGFNECSSEVTKYLSNVDGLSTDVKGRMLSHLANCL 142


>gi|359952828|gb|AEV91210.1| enhancer of split region protein HLHm8 [Teleopsis dalmanni]
          Length = 187

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 14/193 (7%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +++  QY++  KPMLER RRAR+  CL  L+ L+     ++ +NV +++K  +LE T+ +
Sbjct: 1   MAKKQQYQRTKKPMLERHRRARVTNCLSTLRQLIAEC--SDNDNVLRMDKIVMLETTIAY 58

Query: 85  LQ-----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++     K  +QQR A+  +     FR G+     EVS+ LAS PG+++ +G  +M+HLG
Sbjct: 59  MRQQQSAKKNKQQRTAAADIMH--NFRHGYMNAVEEVSRMLASIPGVNIEMGKTIMTHLG 116

Query: 140 QRLNEMDKISPLSVRVMDVCTPPPS-PHSDTYSMPLTPASSGSSQVDTCDYTSQYK--MY 196
           +  N +        +           P  +     L+PASSG    D C+ T   K    
Sbjct: 117 RVYNRLQVKQQKIQQQQQRSYYRNQLPIMNLPQAALSPASSGYYS-DDCESTKSTKSPQV 175

Query: 197 ESMPSPKSVWRPW 209
           E++P  +++WRPW
Sbjct: 176 ETIPQ-ENIWRPW 187


>gi|326537171|emb|CBX36137.1| hairy-2 protein [Glomeris marginata]
          Length = 374

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 73/109 (66%), Gaps = 4/109 (3%)

Query: 45  ARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ---RLASNPVTD 101
           ARIN CL ELK L++ AL+ +    SKLEKADILE+TV+HLQ ++RQQ    +A++P   
Sbjct: 1   ARINHCLLELKSLILEALKKDPARHSKLEKADILEMTVRHLQNVQRQQMALAVATDPSV- 59

Query: 102 ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISP 150
             +FRAGF  CA EV++ +A   G D  +  +L++HLG  L  ++ +SP
Sbjct: 60  MTKFRAGFNECAAEVARYVARIDGADAAVRQRLLNHLGHCLTGLNSLSP 108


>gi|77454920|gb|ABA86269.1| CG8365 [Drosophila simulans]
 gi|77454922|gb|ABA86270.1| CG8365 [Drosophila simulans]
 gi|164449984|gb|ABY56440.1| enhancer of split, partial [Drosophila simulans]
 gi|164449988|gb|ABY56442.1| enhancer of split, partial [Drosophila simulans]
 gi|164449990|gb|ABY56443.1| enhancer of split, partial [Drosophila simulans]
 gi|164449992|gb|ABY56444.1| enhancer of split, partial [Drosophila simulans]
 gi|164449994|gb|ABY56445.1| enhancer of split, partial [Drosophila simulans]
 gi|164449996|gb|ABY56446.1| enhancer of split, partial [Drosophila simulans]
 gi|164449998|gb|ABY56447.1| enhancer of split, partial [Drosophila simulans]
 gi|164450000|gb|ABY56448.1| enhancer of split, partial [Drosophila simulans]
 gi|164450002|gb|ABY56449.1| enhancer of split, partial [Drosophila simulans]
 gi|164450004|gb|ABY56450.1| enhancer of split, partial [Drosophila simulans]
 gi|164450006|gb|ABY56451.1| enhancer of split, partial [Drosophila simulans]
 gi|164450008|gb|ABY56452.1| enhancer of split, partial [Drosophila simulans]
 gi|164450010|gb|ABY56453.1| enhancer of split, partial [Drosophila simulans]
 gi|164450014|gb|ABY56455.1| enhancer of split, partial [Drosophila simulans]
          Length = 166

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 17/157 (10%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +++ + 
Sbjct: 3   YQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFMRQQKT 60

Query: 91  QQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG------QRLN 143
            +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG      Q+ +
Sbjct: 61  PKKVAQEERSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQQFH 120

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSG 180
           E    +      MD         S     PL+PASSG
Sbjct: 121 EAQSATDFLQNSMDC--------SSMDKAPLSPASSG 149


>gi|326925798|ref|XP_003209096.1| PREDICTED: transcription factor HES-4-like [Meleagris gallopavo]
          Length = 227

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 76/120 (63%), Gaps = 5/120 (4%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S T + RK+ KP++ERKRR RIN CLD+LK+ +V A   +    SKLEKADILE+TV+H
Sbjct: 13  LSSTKEERKLRKPLIERKRRERINNCLDQLKETVVGAFHLDQ---SKLEKADILEMTVKH 69

Query: 85  LQKMRRQQRLASNPVT--DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           LQ ++  + +A + V      R+  G+  C +EV   L +   +D  LG +L++HL + L
Sbjct: 70  LQNIQNSKLMADSKVGLEAQQRYSTGYIQCMHEVHNLLLTCEWMDKTLGARLLNHLLKSL 129


>gi|387539960|gb|AFJ70607.1| transcription factor HES-4 isoform 2 [Macaca mulatta]
          Length = 221

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 77/119 (64%), Gaps = 2/119 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HL+ +R
Sbjct: 33  EHRKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLR 92

Query: 90  RQQRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+     A   ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 93  RVQVTAAVNADPAVLGKYRAGFHECLAEVNRFLADCEGVPADVRSRLLGHLAACLRQLG 151


>gi|195389636|ref|XP_002053482.1| GJ23910 [Drosophila virilis]
 gi|194151568|gb|EDW67002.1| GJ23910 [Drosophila virilis]
          Length = 182

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 79/118 (66%), Gaps = 5/118 (4%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+T  Y+KV KP+LER+RRARIN+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   SKTQIYQKVKKPLLERQRRARINKCLDTLKTL-VAELRGD-DGILRMDKAEMLESAVVFM 62

Query: 86  QKMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           ++ +  +   + P + A   + FR G+    NEVS+ +ASTPG+ + LG  +M+HLG+
Sbjct: 63  RQQKMGKSETATPASPAMPLESFRNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGR 120


>gi|108995457|ref|XP_001090404.1| PREDICTED: transcription factor HES-4 [Macaca mulatta]
          Length = 221

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 77/119 (64%), Gaps = 2/119 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HL+ +R
Sbjct: 33  EHRKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLR 92

Query: 90  RQQRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           R Q  A+     A   ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 93  RVQVTAALNADPAVLGKYRAGFHECLAEVNRFLADCEGVPADVRSRLLGHLAACLRQLG 151


>gi|443689902|gb|ELT92193.1| hypothetical protein CAPTEDRAFT_66159, partial [Capitella teleta]
          Length = 114

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 78/112 (69%), Gaps = 4/112 (3%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ--- 92
           KP++E++RRARIN  L +LK L++ AL+ +    SKLEK+DILELTV+HL+ ++ Q    
Sbjct: 4   KPLMEKRRRARINASLHQLKVLVLDALKKDSARFSKLEKSDILELTVKHLKSIQGQHMSA 63

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
            +A++P T A RF +GF+ CA EVS+ L+S    D  +  +L++HL + L++
Sbjct: 64  AMATDP-TVATRFHSGFSECAREVSRYLSSVDNFDESIRGRLLNHLNRCLHQ 114


>gi|363736991|ref|XP_422641.3| PREDICTED: transcription factor HES-4 [Gallus gallus]
          Length = 227

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S T + RK+ KP++ERKRR RIN CLD+LK+ +V A   +    SKLEKADILE+TV+H
Sbjct: 13  LSSTKEERKLRKPLIERKRRERINNCLDQLKETVVGAFHLD---QSKLEKADILEMTVKH 69

Query: 85  LQKMRRQQRLASNPVT--DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           LQ ++  + +A + V      R+  G+  C +EV   L +   +D  LG +L++HL
Sbjct: 70  LQNIQNSKLMADSKVGLEAQQRYSTGYIQCMHEVHNLLLTCEWMDKTLGARLLNHL 125


>gi|410910680|ref|XP_003968818.1| PREDICTED: transcription cofactor HES-6-like [Takifugu rubripes]
          Length = 198

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 17/193 (8%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           SR  + RK+ KP++ERKRR RIN CLD+LK+ ++ A Q    + SKLEKADILE+TV+HL
Sbjct: 14  SRAKEERKMRKPLIERKRRERINNCLDQLKEAVIGAFQL---DQSKLEKADILEMTVRHL 70

Query: 86  QKMRRQQRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL-N 143
           Q ++  +R       +A  ++  G+  C +EV   L +   +D  LG++L++HL + L  
Sbjct: 71  QNIQSSKRGEVTSGLEAQQKYSTGYIQCVHEVHNMLLTCEWMDKTLGSRLLNHLLKSLPR 130

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPK 203
             D   P S    D       PH+D  +       S +  +      +        P P 
Sbjct: 131 SADHCPPQSELQQDFL-----PHADQGTSVALSGESVARHLQRKRPPAHVADPSQSPPPH 185

Query: 204 S-------VWRPW 209
                   +WRPW
Sbjct: 186 GPQLGLLEMWRPW 198


>gi|363895772|gb|AEW42997.1| Hes4 [Nematostella vectensis]
          Length = 244

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 73/106 (68%), Gaps = 1/106 (0%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP +E+ RRARIN  L+ELK L++ A++ +    SK+EKADILE+TV++L+    +Q   
Sbjct: 26  KPQMEKLRRARINDSLNELKSLVLEAMKKDASRYSKMEKADILEMTVKYLRSAPEKQSKI 85

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           S+P + A ++RAG+  CA EV++ L S+  +  +L T+L+SHL  R
Sbjct: 86  SDPTSLA-KYRAGYNECAAEVTRFLLSSENVSDQLRTQLLSHLASR 130


>gi|124302270|gb|ABN05298.1| splhairy [Panulirus argus]
          Length = 253

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 8/140 (5%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++E+KRR RIN CL++LK+L++  L+ +    +KLEKADILE+TV+H+Q + R +   
Sbjct: 24  KPIMEKKRRQRINDCLNQLKNLVLEGLKKDPSRYNKLEKADILEMTVRHVQALHRHESAL 83

Query: 96  SN--PVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLSV 153
           S   PV  A +FRAGF  CA EV + L     +     ++++ HL       D ++ L  
Sbjct: 84  SRQPPVDAAAKFRAGFAHCAAEVGRFLEGDTSVSAGQRSRILLHLA------DAMASLCN 137

Query: 154 RVMDVCTPPPSPHSDTYSMP 173
           +  +   PPP  + D    P
Sbjct: 138 KSHNESPPPPLSNGDPQLAP 157


>gi|391334013|ref|XP_003741403.1| PREDICTED: protein deadpan-like [Metaseiulus occidentalis]
          Length = 245

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 10/139 (7%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQA-EGENVSKLEKADILELTVQHL 85
           +  + R+  KP++E++RRARIN  L+ELK+L++   ++ +    +KLEKADILE+ V+H+
Sbjct: 12  KASEQRRTTKPIMEKRRRARINNSLNELKNLILDYNKSKDTARHNKLEKADILEMAVRHV 71

Query: 86  QKMRRQ---QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           Q + RQ   QR A +P   +D+FRAG+  CA EVS+ L+ +  +D  +   L+SHL Q  
Sbjct: 72  QMLHRQTSVQRAAVDP-NVSDKFRAGYMECAKEVSRYLSRSESVDGSVRQCLLSHLSQTS 130

Query: 143 NEMDKISPLSVRVMDVCTP 161
               + SP     M+  TP
Sbjct: 131 PVAGRTSP-----METATP 144


>gi|10863869|gb|AAG23292.1| transcription factor Her-8b [Danio rerio]
 gi|46249969|gb|AAH68368.1| Her8a protein [Danio rerio]
          Length = 221

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/112 (43%), Positives = 75/112 (66%), Gaps = 8/112 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR- 90
           RK+ KP++E+KRR RIN  L++LK +MV A   +    SKLEKAD+LE+TVQH++ ++R 
Sbjct: 20  RKLRKPLIEKKRRERINSSLEQLKGIMVDAYNLD---QSKLEKADVLEITVQHMENLQRG 76

Query: 91  -QQRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
             Q  +++P T  +   R+ +G+  C +EV   L S PG+D  LG +L++HL
Sbjct: 77  HGQGGSNSPGTGFESRQRYSSGYIQCMHEVHNLLLSCPGMDKTLGARLLNHL 128


>gi|50878287|ref|NP_955918.2| transcription cofactor HES-6 [Danio rerio]
 gi|10863867|gb|AAG23291.1| transcription factor Her-8a [Danio rerio]
          Length = 221

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/112 (43%), Positives = 75/112 (66%), Gaps = 8/112 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR- 90
           RK+ KP++E+KRR RIN  L++LK +MV A   +    SKLEKAD+LE+TVQH++ ++R 
Sbjct: 20  RKLRKPLIEKKRRERINSSLEQLKGIMVDAYNLD---QSKLEKADVLEITVQHMENLQRG 76

Query: 91  -QQRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
             Q  +++P T  +   R+ +G+  C +EV   L S PG+D  LG +L++HL
Sbjct: 77  HGQGGSNSPGTGFESRQRYSSGYIQCMHEVHNLLLSCPGMDKTLGARLLNHL 128


>gi|125776109|ref|XP_001359171.1| GA21022 [Drosophila pseudoobscura pseudoobscura]
 gi|54638915|gb|EAL28317.1| GA21022 [Drosophila pseudoobscura pseudoobscura]
          Length = 186

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 7/120 (5%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KP+LER+RRARIN+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPLLERQRRARINKCLDTLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLAS--NPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           ++ +  +  AS   P   A   D FR G+    NEVS+ +ASTPG+ + LG  +M+HLG+
Sbjct: 63  RQQKSNKTSASTATPAQSALPLDSFRNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGR 122


>gi|164450012|gb|ABY56454.1| enhancer of split, partial [Drosophila simulans]
          Length = 166

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 17/157 (10%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           Y+KV KPMLER+RRAR+N+CL+ LK L V  L+ + + + +++KA++LE  V  +++ + 
Sbjct: 3   YQKVKKPMLERQRRARMNKCLNNLKTL-VAELRGD-DGILRMDKAEMLESAVIFMRQQKT 60

Query: 91  QQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG------QRLN 143
            +++A    +   D F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG      Q+ +
Sbjct: 61  PKKVAQEERSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQQFH 120

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSG 180
           E    +      MD         S     PL+PASSG
Sbjct: 121 EAQSATDFLQNSMDC--------SSMDKAPLSPASSG 149


>gi|195151941|ref|XP_002016897.1| GL21823 [Drosophila persimilis]
 gi|194111954|gb|EDW33997.1| GL21823 [Drosophila persimilis]
          Length = 186

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 79/120 (65%), Gaps = 7/120 (5%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           ++T  Y+KV KP+LER+RRARIN+CLD LK L V  L+ + + + +++KA++LE  V  +
Sbjct: 5   TKTQIYQKVKKPLLERQRRARINKCLDTLKTL-VAELRGD-DGILRMDKAEMLESAVIFM 62

Query: 86  QKMRRQQRLAS--NPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           ++ +  +  AS   P   A   D FR G+    NEVS+ +ASTPG+ + LG  +M+HLG+
Sbjct: 63  RQQKSNKTSASTATPAQSALPLDSFRNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGR 122


>gi|348544191|ref|XP_003459565.1| PREDICTED: transcription cofactor HES-6-like [Oreochromis
           niloticus]
          Length = 190

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 35/192 (18%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++ERKRR RIN CLD+LK+ ++ A + +    SKLEKADILE+TV+HLQ +  Q
Sbjct: 20  RKLRKPLIERKRRERINNCLDQLKETVIGAFRLDQ---SKLEKADILEMTVKHLQNI--Q 74

Query: 92  QRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
               ++P    +   R+  G+  C +EV   L +   +D  LG++L++HL + L      
Sbjct: 75  NNKVNDPTLGLEAQQRYSTGYIQCMHEVHNMLLTCDWMDKTLGSRLLNHLLKSLPRSTDE 134

Query: 149 SPLSVRVMDVCTPPPSPHSD-----TYSMPLTP------ASSGSSQVDTCDYTSQYKMYE 197
            PL++         P+P  D     T ++P TP            Q     ++S   M E
Sbjct: 135 RPLTL---------PTPRLDAALPATQAVPGTPLRVEQFQREAGPQERPALHSSHLGMLE 185

Query: 198 SMPSPKSVWRPW 209
                  +WRPW
Sbjct: 186 -------MWRPW 190


>gi|260813116|ref|XP_002601265.1| hypothetical protein BRAFLDRAFT_116903 [Branchiostoma floridae]
 gi|229286558|gb|EEN57277.1| hypothetical protein BRAFLDRAFT_116903 [Branchiostoma floridae]
          Length = 271

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 11/163 (6%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           + R  + RK  KP++E++RRARIN  L++LK L++  L+ +  + SKLEKADILE+TV+H
Sbjct: 14  VKRPGESRKSSKPIMEKRRRARINDSLNQLKALILADLKKDSSH-SKLEKADILEMTVKH 72

Query: 85  LQKMRRQQRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
           L+ ++RQQ  A+   NP     ++RAGF  C  EV++ L ++  +D ++  +L++HL   
Sbjct: 73  LRSLQRQQLTAAANTNPSLPG-QYRAGFNECLMEVNRFLGASDSVDTQVRQRLLNHLA-- 129

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV 184
                  SP          P   PH+    + +  A +G   V
Sbjct: 130 ----GACSPARPGTYPTAQPAVFPHAQPVQVQVPVAPTGGQHV 168


>gi|261244913|ref|NP_001159638.1| hairy-related 8.2 [Danio rerio]
          Length = 211

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 99/196 (50%), Gaps = 25/196 (12%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++ERKRR RIN CLD+L++ +V   + +    SKLEKADILE+TV+HLQ +  Q
Sbjct: 23  RKLRKPLIERKRRERINLCLDQLRETVVAVFKPDQ---SKLEKADILEMTVKHLQNI--Q 77

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
               S+PV +     R+  G+  C  EV   L S   +D  LG++L++HL + L    K 
Sbjct: 78  SSRVSDPVLNTGARQRYSTGYIQCMQEVHNLLHSCDWMDKTLGSRLLNHLFKSLPLSAKD 137

Query: 149 SPLSVRVMDVCTPPPSPHSDTYSMPLTPASS---GSSQVDTCDY--TSQYKMYESMPSPK 203
            P   +     T  PS HS+  S  +   +S    SS    C     SQ + +  +  P 
Sbjct: 138 CPRLPKT--SLTSVPSDHSEYSSFHVDETASPKPCSSSPFLCKRPNQSQNQHFTPIRMPH 195

Query: 204 SV----------WRPW 209
            V          WRPW
Sbjct: 196 DVESSHLSVLQMWRPW 211


>gi|125980638|ref|XP_001354342.1| GA19235 [Drosophila pseudoobscura pseudoobscura]
 gi|54642650|gb|EAL31395.1| GA19235 [Drosophila pseudoobscura pseudoobscura]
          Length = 217

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 6/104 (5%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           Q +SR+ +YRKVMKP+LERKRRARIN CLDELK ++      E   ++KLEKADILEL V
Sbjct: 81  QGLSRSSEYRKVMKPLLERKRRARINNCLDELKIIIADLAHMETTGLNKLEKADILELAV 140

Query: 83  QHLQKMRR-QQRLASNPVT-----DADRFRAGFTTCANEVSKCL 120
             LQ+ R       S PV      +A+ +  GF  CA +VS  L
Sbjct: 141 HLLQEQRACSSSQLSGPVAHQQRLEAESYWGGFRQCAVQVSSFL 184


>gi|317575696|ref|NP_001187949.1| hairy and enhancer of split 6 [Ictalurus punctatus]
 gi|308324421|gb|ADO29345.1| transcription cofactor hes-6 [Ictalurus punctatus]
          Length = 224

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 36/209 (17%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E+KRRARIN  L EL+ L+      + +  +K+E A++LE+TV+H++ + + 
Sbjct: 21  RKTRKPLVEKKRRARINESLQELRVLLT-----DSDAQTKMENAEVLEMTVKHVESILQN 75

Query: 92  QRLASNPVT--DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ--RLNEMDK 147
           +  AS+ +    ++RF AG+  C +EV   ++S PGID  +   L++HL +   LN+ D+
Sbjct: 76  RAKASDSMNREASERFAAGYIQCMHEVHTFVSSCPGIDATIAADLLNHLLECMPLNDEDR 135

Query: 148 ISPLSVRVMDVCT--------------PPPSPHSDTYSMPLTPASSGSSQVDTC------ 187
              L   +M  C                PP   +      L+P+ S +S  D C      
Sbjct: 136 FQDLLSDLMGDCGNAGTWPGDGMYAVLSPPEGRATGIPSALSPSPSNTSSDDLCSDIDET 195

Query: 188 ----DYTSQYKMYESMPS---PKSVWRPW 209
                +       +++P+    K VWRPW
Sbjct: 196 DTEHSHVDSRDAQDNIPTVFYSKPVWRPW 224


>gi|164449986|gb|ABY56441.1| enhancer of split, partial [Drosophila simulans]
          Length = 166

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 17/157 (10%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           Y+KV KPMLER+RRAR+N+CLD LK L V  L+ + + + +++KA++LE  V  +++ + 
Sbjct: 3   YQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFMRQQKT 60

Query: 91  QQRLASNPVT-DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG------QRLN 143
            +++A    +   D F+ G+    NEVS+ +AST G+ + LG  +M+HLG      Q+ +
Sbjct: 61  PKKVAQEERSLPLDSFKNGYMNAVNEVSRVMASTSGMSVDLGKSVMTHLGRVYKNLQQFH 120

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSG 180
           E    +      MD         S     PL+PASSG
Sbjct: 121 EAQSATDFLQNSMDC--------SSMDKAPLSPASSG 149


>gi|345311459|ref|XP_001517731.2| PREDICTED: transcription cofactor HES-6-like [Ornithorhynchus
           anatinus]
          Length = 221

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 6/118 (5%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQK 87
           T + RK+ KP++ERKRR RIN CLD+LK+ +V A   +    SKLEKADILE+TV+HLQ 
Sbjct: 16  TKEERKLRKPLIERKRRERINNCLDQLKEAVVGAFHLD---QSKLEKADILEMTVKHLQN 72

Query: 88  MRRQQRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           ++  + +     T  +   RF  G+  C +EV   L S   +D  LG +L++HL + L
Sbjct: 73  IQNNKIMGDALHTGLEAQQRFSTGYIQCMHEVHNLLLSCEWMDRTLGARLLNHLLKSL 130


>gi|216548627|ref|NP_001135939.1| transcription factor HES-4 isoform 1 [Homo sapiens]
          Length = 247

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 75/114 (65%), Gaps = 4/114 (3%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ--- 92
           KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HL+ +RR Q   
Sbjct: 65  KPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTA 124

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
            L+++P     ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 125 ALSADPAV-LGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLG 177


>gi|195491106|ref|XP_002093420.1| GE20765 [Drosophila yakuba]
 gi|194179521|gb|EDW93132.1| GE20765 [Drosophila yakuba]
          Length = 338

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 14/168 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD--- 146
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N +    
Sbjct: 92  QAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCINGVKTEL 147

Query: 147 -----KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDY 189
                +    S+    + +PP SP  D+      P   G  Q     Y
Sbjct: 148 HQQQRQQQQQSIHAQMLPSPPSSPEQDSQQAAAAPYLFGQIQQTASGY 195


>gi|194865816|ref|XP_001971618.1| GG14338 [Drosophila erecta]
 gi|190653401|gb|EDV50644.1| GG14338 [Drosophila erecta]
          Length = 339

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 14/168 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD--- 146
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N +    
Sbjct: 92  QAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCINGVKTEL 147

Query: 147 -----KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDY 189
                +    S+    + +PP SP  D+      P   G  Q     Y
Sbjct: 148 HQQQRQQQQQSIHAQMLPSPPSSPEQDSQQAAAAPYLFGQIQQTASGY 195


>gi|108742149|gb|AAI17622.1| LOC565269 protein [Danio rerio]
          Length = 223

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 99/201 (49%), Gaps = 35/201 (17%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++ERKRR RIN CLD+L++ +V   + +    SKLEKADILE+TV+HLQ +  Q
Sbjct: 35  RKLRKPLIERKRRERINLCLDQLRETVVGVFKPDQ---SKLEKADILEMTVKHLQNI--Q 89

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
               S+PV +     R+  G+  C  EV   L S   +D  LG++L +HL + L      
Sbjct: 90  SSRVSDPVLNTGARQRYSTGYIQCMQEVHNLLHSCDWMDKTLGSRLFNHLFKSL------ 143

Query: 149 SPLSVRVMD-----VCTPPPSPHSDTYSMPLTPASS---GSSQVDTCDY--TSQYKMYES 198
            PLS +          T  PS HS+  S  +   +S    SS    C     SQ + +  
Sbjct: 144 -PLSAKDCSQLPKTSLTSIPSDHSEYSSFHVDETASPKPCSSSPFLCKRPNQSQNQHFTP 202

Query: 199 MPSPKSV----------WRPW 209
           +  P  V          WRPW
Sbjct: 203 IRMPHDVESSHLSVLQMWRPW 223


>gi|195125860|ref|XP_002007392.1| GI12920 [Drosophila mojavensis]
 gi|193919001|gb|EDW17868.1| GI12920 [Drosophila mojavensis]
          Length = 368

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 6/114 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           Q            ++F+AGF  CANEVS+     PG+D     +L+ HL   +N
Sbjct: 92  QAAMQQAADPKIINKFKAGFADCANEVSRF----PGLDAAQRRRLLQHLSNCIN 141


>gi|327267187|ref|XP_003218384.1| PREDICTED: transcription factor HES-4-like [Anolis carolinensis]
          Length = 255

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 5/113 (4%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++ERKRR RIN CLD+LK+ +V A   +    SKLEKADILE+TV+HLQ ++  
Sbjct: 58  RKLRKPLIERKRRERINNCLDQLKETVVGAFHLDQ---SKLEKADILEMTVKHLQNIQTS 114

Query: 92  QRLA--SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           + +A  +  +    R+  G+  C +EV   L +   +D  LG +L++HL + L
Sbjct: 115 KNVADSTTGLEAQQRYSTGYIQCMHEVHNLLLTCEWMDKTLGARLLNHLLKSL 167


>gi|432894937|ref|XP_004076005.1| PREDICTED: transcription cofactor HES-6-like [Oryzias latipes]
          Length = 198

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 33/197 (16%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK+ KP++ERKRR RIN CLD+LK+ ++ A + +    SKLEKADILE+TV+HLQ ++
Sbjct: 18  EERKMRKPLIERKRRERINNCLDQLKETVIGAFRLDQ---SKLEKADILEMTVKHLQNIQ 74

Query: 90  RQQRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL---- 142
             Q    +P    +   R+  G+  C +EV   L +   +D  LG++L++HL + L    
Sbjct: 75  NSQ--MPDPTLGLEAQQRYSTGYIQCMHEVHNMLLTCDWMDKTLGSRLLNHLLKSLPRST 132

Query: 143 NEMDKISPLSVRVMDV------CTP----PPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
           ++  +  P    ++DV       TP    P  P     S PL     G  Q     ++S 
Sbjct: 133 DDSSRNQPRHDALLDVPLRSVLATPLRGLPKKPRQKEGSPPLL----GGQQERPELHSSH 188

Query: 193 YKMYESMPSPKSVWRPW 209
             M E       +WRPW
Sbjct: 189 LSMME-------MWRPW 198


>gi|157104510|ref|XP_001648441.1| hairy protein [Aedes aegypti]
 gi|108880305|gb|EAT44530.1| AAEL004106-PA [Aedes aegypti]
          Length = 343

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 76/116 (65%), Gaps = 4/116 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E+KRRARIN  L++LK L++ A++ +    SKLEKADIL+LTV+HLQ + 
Sbjct: 27  EIRKTNKPIMEKKRRARINNYLNDLKALLLDAMKKDPIRHSKLEKADILDLTVKHLQDLE 86

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           R++    +A +P T  D+F++GF  C  E+ K L +   +D  +  ++ +HL   L
Sbjct: 87  RRKLAIAMAVDP-TVVDKFKSGFNECIEEIDKYLNTVSSVDGGMKQRISNHLKSYL 141


>gi|224059367|ref|XP_002188230.1| PREDICTED: transcription cofactor HES-6-like [Taeniopygia guttata]
          Length = 231

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 5/116 (4%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           ++   + RK+ KP++ERKRR RIN CLD+LK+ +V A   +    SKLEKADILE+TV+H
Sbjct: 12  VASIKEERKLRKPLIERKRRERINNCLDQLKETVVGAFHLD---QSKLEKADILEMTVKH 68

Query: 85  LQKMRRQQRLASNPVT--DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           LQ ++  + +A + V      R+  G+  C +EV   L +   +D  LG +L++HL
Sbjct: 69  LQNIQSSKMMADSKVGLEAQQRYSTGYIQCMHEVHNLLLTCEWMDRSLGARLLNHL 124


>gi|195375961|ref|XP_002046765.1| hairy [Drosophila virilis]
 gi|194153923|gb|EDW69107.1| hairy [Drosophila virilis]
          Length = 379

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 6/114 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 39  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 98

Query: 92  QRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           Q            ++F+AGF  CANEVS+     PG+D     +L+ HL   +N
Sbjct: 99  QAAMQQAADPKIINKFKAGFADCANEVSRF----PGLDSTQRRRLLQHLSNCIN 148


>gi|122214|sp|P29303.1|HAIR_DROVI RecName: Full=Protein hairy
 gi|157590|gb|AAA28602.1| basic-helix-loop-helix protein [Drosophila virilis]
          Length = 378

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 6/114 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 38  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 97

Query: 92  QRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           Q            ++F+AGF  CANEVS+     PG+D     +L+ HL   +N
Sbjct: 98  QAAMQQAADPKIINKFKAGFADCANEVSRF----PGLDSTQRRRLLQHLSNCIN 147


>gi|157278359|ref|NP_001098282.1| Her13.2 [Oryzias latipes]
 gi|66393600|gb|AAY45949.1| Her13.2 [Oryzias latipes]
          Length = 233

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 38/221 (17%)

Query: 20  EQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILE 79
           E  +P       RKV KP++E+KRRARIN  L EL+ L+     A+ +  SK+E A++LE
Sbjct: 20  EDDEPYGIQRADRKVRKPLVEKKRRARINESLQELRTLL-----ADADFNSKMENAEVLE 74

Query: 80  LTVQHLQ---KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMS 136
           +TV+ ++   K R Q++ A N    ++RF AG+  C +EV   + S PGID  +  +L++
Sbjct: 75  VTVKKVEDILKSRSQEKDALNREA-SERFAAGYIQCMHEVHTFVTSCPGIDAAVAAELLN 133

Query: 137 HLGQ--RLNE-------MDKISPLSV-RVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDT 186
           HL +   +NE       MD I+  S      + +P     S   +  L+PA+S SS+ D+
Sbjct: 134 HLLECMPMNEDHLQDVMMDLITDTSACNSSTLASPGGGSLSGCEASALSPATSPSSE-DS 192

Query: 187 C---------------DYTSQYKMYESMPS---PKSVWRPW 209
           C               +  +  +   SMP+   P+ +WRPW
Sbjct: 193 CSDLDEVDGEHHQSSTEVAAGSRGGLSMPTVAYPRFMWRPW 233


>gi|156390538|ref|XP_001635327.1| predicted protein [Nematostella vectensis]
 gi|156222420|gb|EDO43264.1| predicted protein [Nematostella vectensis]
          Length = 105

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 72/103 (69%), Gaps = 1/103 (0%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP +E+ RRARIN  L+ELK L++ A++ +    SK+EKADILE+TV++L+    +Q   
Sbjct: 4   KPQMEKLRRARINDSLNELKSLVLEAMKKDASRYSKMEKADILEMTVKYLRSAPEKQSKI 63

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           S+P + A ++RAG+  CA EV++ L S+  +  +L T+L+SHL
Sbjct: 64  SDPTSLA-KYRAGYNECAAEVTRFLLSSENVSDQLRTQLLSHL 105


>gi|170038685|ref|XP_001847179.1| hairy protein [Culex quinquefasciatus]
 gi|167882378|gb|EDS45761.1| hairy protein [Culex quinquefasciatus]
          Length = 344

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 73/107 (68%), Gaps = 4/107 (3%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ---RLA 95
           +E+KRRARIN  L++LK L++ A++ +    SKLEKADIL+LTV+HLQ M R++    +A
Sbjct: 1   MEKKRRARINNYLNDLKALLLDAMKKDPIRHSKLEKADILDLTVKHLQDMERRKLAVAMA 60

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
            +P T  D+F++G+  C +E+ K  ++ PG+D  L  ++ +HL   L
Sbjct: 61  VDP-TVVDKFKSGYNECVDEIDKYFSTVPGMDSGLKQRVTNHLKSYL 106


>gi|16506654|gb|AAL17767.1| hairy [Drosophila melanogaster]
 gi|16506656|gb|AAL17768.1| hairy [Drosophila melanogaster]
 gi|16506658|gb|AAL17769.1| hairy [Drosophila melanogaster]
          Length = 337

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD--- 146
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N +    
Sbjct: 92  QAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCINGVKTEL 147

Query: 147 -----KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDY 189
                +    S+    + +PP SP  D+      P   G  Q  +  +
Sbjct: 148 HQQQRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTASGYF 195


>gi|24661088|ref|NP_523977.2| hairy, isoform A [Drosophila melanogaster]
 gi|62472102|ref|NP_001014577.1| hairy, isoform B [Drosophila melanogaster]
 gi|93141273|sp|P14003.2|HAIR_DROME RecName: Full=Protein hairy
 gi|8049|emb|CAA34018.1| hairy [Drosophila melanogaster]
 gi|7295051|gb|AAF50378.1| hairy, isoform A [Drosophila melanogaster]
 gi|16506660|gb|AAL17770.1| hairy [Drosophila melanogaster]
 gi|16506662|gb|AAL17771.1| hairy [Drosophila melanogaster]
 gi|16506664|gb|AAL17772.1| hairy [Drosophila melanogaster]
 gi|16506666|gb|AAL17773.1| hairy [Drosophila melanogaster]
 gi|16506668|gb|AAL17774.1| hairy [Drosophila melanogaster]
 gi|16506670|gb|AAL17775.1| hairy [Drosophila melanogaster]
 gi|16506672|gb|AAL17776.1| hairy [Drosophila melanogaster]
 gi|21429136|gb|AAM50287.1| RE40955p [Drosophila melanogaster]
 gi|61678473|gb|AAX52752.1| hairy, isoform B [Drosophila melanogaster]
 gi|220942454|gb|ACL83770.1| h-PA [synthetic construct]
 gi|220952674|gb|ACL88880.1| h-PA [synthetic construct]
          Length = 337

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD--- 146
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N +    
Sbjct: 92  QAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCINGVKTEL 147

Query: 147 -----KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDY 189
                +    S+    + +PP SP  D+      P   G  Q  +  +
Sbjct: 148 HQQQRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTASGYF 195


>gi|195326093|ref|XP_002029764.1| GM25080 [Drosophila sechellia]
 gi|194118707|gb|EDW40750.1| GM25080 [Drosophila sechellia]
          Length = 337

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD--- 146
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N +    
Sbjct: 92  QAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCINGVKTEL 147

Query: 147 -----KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDY 189
                +    S+    + +PP SP  D+      P   G  Q  +  +
Sbjct: 148 HQQQRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTASGYF 195


>gi|195588837|ref|XP_002084163.1| hairy [Drosophila simulans]
 gi|16506674|gb|AAL17777.1| hairy [Drosophila simulans]
 gi|194196172|gb|EDX09748.1| hairy [Drosophila simulans]
          Length = 337

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD--- 146
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N +    
Sbjct: 92  QAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCINGVKTEL 147

Query: 147 -----KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDY 189
                +    S+    + +PP SP  D+      P   G  Q  +  +
Sbjct: 148 HQQQRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTASGYF 195


>gi|8053|emb|CAA34019.1| unnamed protein product [Drosophila melanogaster]
          Length = 337

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD--- 146
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N +    
Sbjct: 92  QAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCINGVKTEL 147

Query: 147 -----KISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDY 189
                +    S+    + +PP SP  D+      P   G  Q  +  +
Sbjct: 148 HQQQRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTASGYF 195


>gi|357602222|gb|EHJ63319.1| hypothetical protein KGM_12225 [Danaus plexippus]
          Length = 211

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 69/100 (69%), Gaps = 10/100 (10%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNP 98
           +E++RRARIN CL+ELK L++ A++ +    SKLEKADILE+TV+HL+ +R +   A +P
Sbjct: 1   MEKRRRARINNCLNELKALILDAMKKDPARHSKLEKADILEMTVKHLEGLRSEG--AGSP 58

Query: 99  VTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
               DRF+AG+  C +EVSK     PG+D  L  +L+ HL
Sbjct: 59  ----DRFKAGYRHCLSEVSKF----PGLDTGLKRRLVKHL 90


>gi|194748917|ref|XP_001956888.1| GF24345 [Drosophila ananassae]
 gi|190624170|gb|EDV39694.1| GF24345 [Drosophila ananassae]
          Length = 346

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 14/148 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 33  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 92

Query: 92  QRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD--- 146
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N +    
Sbjct: 93  QAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCINGVKAEL 148

Query: 147 -----KISPLSVRVMDVCTPPPSPHSDT 169
                +    S+    + +PP SP  D+
Sbjct: 149 HHQQRQQQQQSIHAQMLPSPPSSPEQDS 176


>gi|209731880|gb|ACI66809.1| Transcription cofactor HES-6 [Salmo salar]
          Length = 230

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 40/212 (18%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMV-TALQAEGENVSKLEKADILELTVQHLQKMRR 90
           RK+ KP++E+KRRARIN  L EL+ L+  T LQ      SK+E A++LE+TV+ ++ + +
Sbjct: 25  RKIRKPLVEKKRRARINESLQELRVLLADTDLQ------SKMENAEVLEMTVKRVESILQ 78

Query: 91  QQRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ--RLNEMD 146
            Q    +PV    ++RF AG+  C +EV   ++S PGID  L  +L++HL +   LN+ D
Sbjct: 79  NQAQEVDPVNQEASERFAAGYIQCMHEVHTFVSSCPGIDATLAAELLNHLLECMPLNDED 138

Query: 147 KISPLSVRVMDVCTPPPS---PHSD-TYSMPLTPASSGS--------------------- 181
           ++  +   +M  C+   S   P S+  Y+  ++P                          
Sbjct: 139 RLQVMLQDIMADCSTNGSSTWPSSEGIYAALVSPGGRSIPSGSSSTPSPASSTTSSDDLC 198

Query: 182 SQVDTCDYT-SQYKMYESMPS---PKSVWRPW 209
           S +D  D   S   +  +MP     KS+WRPW
Sbjct: 199 SDLDETDSEQSHISVVLNMPRVAYSKSMWRPW 230


>gi|431922628|gb|ELK19548.1| Transcription factor HES-4 [Pteropus alecto]
          Length = 194

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 4/111 (3%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ---RLA 95
           +E++RRARIN  L +LK L++ AL+ +  + SKLEKADILE+TV+HLQ +RR Q    L 
Sbjct: 1   MEKRRRARINESLAQLKTLILDALRKDSSHHSKLEKADILEMTVRHLQSLRRVQVAAALG 60

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           ++P     ++RAGF  C  EV++ LA   G+   + ++L+ HL   L ++ 
Sbjct: 61  ADPAV-LGKYRAGFNECLAEVNRFLADCEGVSADVRSRLLGHLAACLGQLG 110


>gi|260841532|ref|XP_002613966.1| hypothetical protein BRAFLDRAFT_116863 [Branchiostoma floridae]
 gi|229299356|gb|EEN69975.1| hypothetical protein BRAFLDRAFT_116863 [Branchiostoma floridae]
          Length = 286

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 75/110 (68%), Gaps = 7/110 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN  L++LK L++ AL+ +    +KLEKADILE+ V++L+ ++R 
Sbjct: 14  RKSSKPIMEKRRRARINESLNQLKTLILDALKKDSSRQNKLEKADILEMAVRYLRDIQRH 73

Query: 92  Q---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           Q     +++P T A R+RAGF  C  EVS+    T G+D  +  +L+SHL
Sbjct: 74  QLTVSASTDPGTHA-RYRAGFNHCTAEVSRF---TEGMDPPVRQRLLSHL 119


>gi|144227376|gb|ABO93448.1| hairy-enhancer-of-split 1 [Strigamia maritima]
          Length = 105

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 10/100 (10%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S+  + R+  KP++E++RRARIN  L ELK L++ A++ +    SKLEKADILE+TV++L
Sbjct: 9   SKASEARRSNKPLMEKRRRARINHSLTELKTLILNAVKKDNSKHSKLEKADILEMTVKYL 68

Query: 86  QKMRRQQRLASNPVTDAD-------RFRAGFTTCANEVSK 118
           Q ++RQQ  AS    D+D       +F AG+  CANEV++
Sbjct: 69  QNLQRQQLTAS---ADSDTSSLTSTKFSAGYGECANEVTR 105


>gi|118404070|ref|NP_001072210.1| hairy and enhancer of split 6, gene 2 [Xenopus (Silurana)
           tropicalis]
 gi|110645526|gb|AAI18778.1| hairy and enhancer of split 6, gene 2 [Xenopus (Silurana)
           tropicalis]
          Length = 189

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 12/181 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++ERKRR RIN CL++LK+ ++ A      + SKLEKADILE+TV+HLQ +++ 
Sbjct: 18  RKLRKPLIERKRRERINTCLEQLKETVIKAFHL---DQSKLEKADILEMTVRHLQNIQKS 74

Query: 92  QRLA--SNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
           +     S    DA  RF  G+  C +E+   L +   +D  LG +L++HL + L   +  
Sbjct: 75  KSTGEPSQGSVDAQQRFSTGYIQCMHELHSLLLTCDWMDPALGARLLNHLLKSLPRPEGR 134

Query: 149 SPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRP 208
           +   ++  +  T        T S  L+   +  + V      +Q K   S+     +WRP
Sbjct: 135 TAFLIQDYEGDT------GRTMSPSLSDCEAEQTSVPLHSDVAQGKTQCSLLRSLQMWRP 188

Query: 209 W 209
           W
Sbjct: 189 W 189


>gi|37576217|gb|AAQ93672.1| hairy F protein [Branchiostoma floridae]
          Length = 286

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 7/110 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E++RRARIN  L++LK L++ AL+ +    +KLEKADILE+ V++L+ ++R 
Sbjct: 14  RKSSKPIMEKRRRARINESLNQLKTLILDALKKDSSRQNKLEKADILEMAVRYLRDIQRH 73

Query: 92  QRLAS---NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           Q   S    P T A R+RAGF  C  EVS+    T G+D  +  +L+SHL
Sbjct: 74  QLTVSASTEPGTHA-RYRAGFNHCTAEVSRF---TEGMDPPVRQRLLSHL 119


>gi|195428507|ref|XP_002062314.1| hairy [Drosophila willistoni]
 gi|194158399|gb|EDW73300.1| hairy [Drosophila willistoni]
          Length = 380

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 6/114 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 32  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 91

Query: 92  QRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N
Sbjct: 92  QAAMQQAADPKIINKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSSCIN 141


>gi|195173500|ref|XP_002027528.1| GL10333 [Drosophila persimilis]
 gi|194114429|gb|EDW36472.1| GL10333 [Drosophila persimilis]
          Length = 354

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 6/114 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 41  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 100

Query: 92  QRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N
Sbjct: 101 QAAMQQAADPKIINKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCIN 150


>gi|195172101|ref|XP_002026840.1| GL27048 [Drosophila persimilis]
 gi|194111779|gb|EDW33822.1| GL27048 [Drosophila persimilis]
          Length = 217

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 6/104 (5%)

Query: 23  QPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
           Q +SR+ +YRKVMKP+LERKRRARIN  LDELK ++      E   ++KLEKADILEL V
Sbjct: 81  QGLSRSSEYRKVMKPLLERKRRARINNSLDELKIIISDLAHMETTGLNKLEKADILELAV 140

Query: 83  QHLQKMRR-QQRLASNPVT-----DADRFRAGFTTCANEVSKCL 120
             LQ+ R       S PV      +A+ +  GF  CA +VS  L
Sbjct: 141 HLLQEQRACSSSQLSGPVAHQQRLEAESYWGGFRQCAVQVSSFL 184


>gi|198464143|ref|XP_001353102.2| GA19636 [Drosophila pseudoobscura pseudoobscura]
 gi|198151558|gb|EAL30603.2| GA19636 [Drosophila pseudoobscura pseudoobscura]
          Length = 354

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 6/114 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN CL+ELK L++ A + +    SKLEKADILE TV+HLQ+++RQ
Sbjct: 41  RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQ 100

Query: 92  QRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           Q            ++F+AGF  C NEVS+     PGI+     +L+ HL   +N
Sbjct: 101 QAAMQQAADPKIINKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLSNCIN 150


>gi|410910628|ref|XP_003968792.1| PREDICTED: transcription cofactor HES-6-like [Takifugu rubripes]
          Length = 233

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 38/218 (17%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
             R    RK+ KP++E+KRRARIN  L EL+ L+     A+ +  SK+E A++LE+TV+ 
Sbjct: 21  FGRQKTDRKIRKPLVEKKRRARINESLRELRTLL-----ADTDIHSKMENAEVLEMTVKK 75

Query: 85  LQKMRRQQRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ-- 140
           ++ + + Q   +  +     +RF AG+  C +EV   ++S PGID  +  +L++HL +  
Sbjct: 76  VEDVLKDQTQETEALNREANERFAAGYIQCMHEVHMFVSSCPGIDATVAAELLNHLLECM 135

Query: 141 RLNE-------MDKISPLSVR--------VMDVCTPPPSPHSDT-YSMPLTPASSGSSQV 184
            LNE       MD I+  S             +C    SP   +  S  L+PA S +S  
Sbjct: 136 PLNEDHLQDTLMDLIADTSGSDGSTWHGGGESLCVTLESPRGRSGLSAVLSPAPSTTSSE 195

Query: 185 DTC----DYTSQYKMYES---------MPSPKSVWRPW 209
           D C    D  S++    +         M S +S+WRPW
Sbjct: 196 DLCSDLDDTDSEHNQSSTEGLEHREGLMTSSRSMWRPW 233


>gi|62008435|gb|AAX60959.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAIXRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|47228800|emb|CAG07532.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 278

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 32/148 (21%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQA------------------------- 64
           ++RK  KP++E++RRARIN  L +LK L++ AL+                          
Sbjct: 33  EHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDVSPNHCHHCQLMLTLRSCDSKLNY 92

Query: 65  -----EGENVSKLEKADILELTVQHLQKMRRQQRLA--SNPVTDADRFRAGFTTCANEVS 117
                +    SKLEKADILE+TV+HL+ ++R Q  A  S   T   ++RAGF  C NEV+
Sbjct: 93  THFVPQSSRHSKLEKADILEMTVKHLRNLQRVQMSAALSADATVLSKYRAGFNECMNEVT 152

Query: 118 KCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           + L+++ G++  + ++L++HL   + +M
Sbjct: 153 RFLSTSEGVNAEVRSRLLNHLSSCMGQM 180


>gi|62008181|gb|AAX60832.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMAXTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|332214413|ref|XP_003256332.1| PREDICTED: transcription factor HES-1 [Nomascus leucogenys]
          Length = 228

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 4/94 (4%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCL 120
           R Q    L+++P +   ++RAGF+ C N+V++ L
Sbjct: 93  RAQMTAALSTDP-SVLGKYRAGFSECMNQVTRFL 125


>gi|395840767|ref|XP_003793223.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor HES-4
           [Otolemur garnettii]
          Length = 223

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 75/120 (62%), Gaps = 4/120 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RR RIN  L +LK L++ AL+ E    SKLEKAD LE+TV+HLQ + 
Sbjct: 33  EHRKSSKPVMEKRRRVRINESLAQLKTLILDALRKESSRRSKLEKADXLEMTVRHLQHLH 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
             Q    L+++PV    ++ +GF  C  EV++ LA   G+   + ++L+ HL   L+ + 
Sbjct: 93  CVQVTAALSADPVI-LGKYLSGFNECLAEVTRFLAGCEGVSADVRSRLLGHLAACLHXLG 151


>gi|62008285|gb|AAX60884.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALXF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFXX 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|76637787|ref|XP_584091.2| PREDICTED: transcription factor HES-4 [Bos taurus]
 gi|297484229|ref|XP_002694182.1| PREDICTED: transcription factor HES-4 isoform 1 [Bos taurus]
 gi|296479093|tpg|DAA21208.1| TPA: hairy and enhancer of split 4-like isoform 1 [Bos taurus]
          Length = 222

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 7/129 (5%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +L+ L++ AL+ E    SKLEKADILELTV+HLQ +R
Sbjct: 33  EHRKSSKPVMEKRRRARINESLAQLQSLLLDALRKESSRRSKLEKADILELTVRHLQSLR 92

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QRLN 143
           R Q    L S+P     ++RAGF  C  EV++ LA   G+   + ++L+ HL     RL 
Sbjct: 93  RVQVTAALRSDPAI-LGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLCHLAACLARLG 151

Query: 144 EMDKISPLS 152
              +  PL+
Sbjct: 152 PARRPLPLA 160


>gi|198453378|ref|XP_001359177.2| GA19349 [Drosophila pseudoobscura pseudoobscura]
 gi|198132333|gb|EAL28321.2| GA19349 [Drosophila pseudoobscura pseudoobscura]
          Length = 187

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +L+KA++LE  +  
Sbjct: 13  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRLDKAEMLEAALVF 70

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   + F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 71  MRKQVVKQQAPVSPLP-MNSFKNGYMNAVSEISRVMACTPAMSVDIGKTVMTHLGVEFQR 129

Query: 145 M 145
           M
Sbjct: 130 M 130


>gi|49457843|ref|NP_001001768.1| hairy and enhancer of split [Strongylocentrotus purpuratus]
 gi|42795451|gb|AAS46235.1| hairy/enhancer of split [Strongylocentrotus purpuratus]
          Length = 400

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 9/118 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP +E++RRARIN  L +LK L++ A   +    SKLEKADILE+TV+HL+ ++R 
Sbjct: 25  RKSSKPQMEKRRRARINDSLGQLKALILEATNKDSSRHSKLEKADILEMTVKHLRNIQRN 84

Query: 92  Q---RLASNPVTDADRFRAGFTTCANEVSKCLA---STPGIDLRLGTKLMSHLGQRLN 143
           Q    L+S+P     RFR G++ C +EV++      +  G D+RL   L++HL    N
Sbjct: 85  QLTGPLSSDP-NMVSRFRQGYSECVHEVARFFTNIENIGGPDMRL--SLINHLANTCN 139


>gi|62008455|gb|AAX60969.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|62008095|gb|AAX60789.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008153|gb|AAX60818.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008165|gb|AAX60824.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008205|gb|AAX60844.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008239|gb|AAX60861.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008241|gb|AAX60862.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008257|gb|AAX60870.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008289|gb|AAX60886.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008321|gb|AAX60902.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008337|gb|AAX60910.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008383|gb|AAX60933.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008385|gb|AAX60934.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008397|gb|AAX60940.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008459|gb|AAX60971.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008477|gb|AAX60980.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008479|gb|AAX60981.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008489|gb|AAX60986.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008491|gb|AAX60987.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008541|gb|AAX61012.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008557|gb|AAX61020.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008575|gb|AAX61029.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008611|gb|AAX61047.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008647|gb|AAX61065.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008661|gb|AAX61072.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008709|gb|AAX61096.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008741|gb|AAX61112.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|195151947|ref|XP_002016900.1| GL22018 [Drosophila persimilis]
 gi|194111957|gb|EDW34000.1| GL22018 [Drosophila persimilis]
          Length = 186

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +L+KA++LE  +  
Sbjct: 13  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRLDKAEMLEAALVF 70

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   + F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 71  MRKQVVKQQAPVSPLP-MNSFKNGYMNAVSEISRVMACTPAMSVDIGKTVMTHLGVEFQR 129

Query: 145 M 145
           M
Sbjct: 130 M 130


>gi|242024219|ref|XP_002432526.1| hypothetical protein Phum_PHUM590030 [Pediculus humanus corporis]
 gi|212517978|gb|EEB19788.1| hypothetical protein Phum_PHUM590030 [Pediculus humanus corporis]
          Length = 403

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 18/127 (14%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV--SKLEKADILELTVQHLQKMR 89
           R++ KP++E++RRARIN+ L  LK L++ + + E  N   SKLEKADILELTV+HLQ   
Sbjct: 73  RRINKPLMEKRRRARINQSLAILKALILDSTKTEQNNTKHSKLEKADILELTVRHLQ--- 129

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLAS----------TPGIDLRLGTKLMSHLG 139
           RQ+ L ++ +   ++++AGF  C  EV   L +          +P ID  L  +L  HL 
Sbjct: 130 RQKILNADII---NKYKAGFEECTKEVKTFLDNLTDVNVINNPSPAIDSTLKQRLFRHLE 186

Query: 140 QRLNEMD 146
           Q L E+D
Sbjct: 187 QCLGELD 193


>gi|62008097|gb|AAX60790.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008099|gb|AAX60791.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008101|gb|AAX60792.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008103|gb|AAX60793.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008105|gb|AAX60794.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008107|gb|AAX60795.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008109|gb|AAX60796.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008111|gb|AAX60797.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008113|gb|AAX60798.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008115|gb|AAX60799.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008117|gb|AAX60800.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008119|gb|AAX60801.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008121|gb|AAX60802.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008123|gb|AAX60803.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008125|gb|AAX60804.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008127|gb|AAX60805.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008129|gb|AAX60806.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008131|gb|AAX60807.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008133|gb|AAX60808.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008135|gb|AAX60809.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008137|gb|AAX60810.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008139|gb|AAX60811.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008141|gb|AAX60812.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008143|gb|AAX60813.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008145|gb|AAX60814.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008149|gb|AAX60816.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008151|gb|AAX60817.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008155|gb|AAX60819.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008157|gb|AAX60820.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008159|gb|AAX60821.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008161|gb|AAX60822.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008167|gb|AAX60825.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008169|gb|AAX60826.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008171|gb|AAX60827.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008175|gb|AAX60829.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008177|gb|AAX60830.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008179|gb|AAX60831.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008183|gb|AAX60833.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008187|gb|AAX60835.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008189|gb|AAX60836.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008193|gb|AAX60838.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008195|gb|AAX60839.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008197|gb|AAX60840.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008199|gb|AAX60841.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008201|gb|AAX60842.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008203|gb|AAX60843.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008207|gb|AAX60845.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008209|gb|AAX60846.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008211|gb|AAX60847.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008213|gb|AAX60848.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008215|gb|AAX60849.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008217|gb|AAX60850.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008219|gb|AAX60851.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008221|gb|AAX60852.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008223|gb|AAX60853.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008225|gb|AAX60854.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008227|gb|AAX60855.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008229|gb|AAX60856.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008231|gb|AAX60857.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008233|gb|AAX60858.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008235|gb|AAX60859.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008237|gb|AAX60860.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008243|gb|AAX60863.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008247|gb|AAX60865.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008249|gb|AAX60866.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008251|gb|AAX60867.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008253|gb|AAX60868.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008255|gb|AAX60869.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008259|gb|AAX60871.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008261|gb|AAX60872.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008263|gb|AAX60873.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008265|gb|AAX60874.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008267|gb|AAX60875.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008269|gb|AAX60876.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008271|gb|AAX60877.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008273|gb|AAX60878.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008275|gb|AAX60879.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008277|gb|AAX60880.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008279|gb|AAX60881.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008281|gb|AAX60882.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008283|gb|AAX60883.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008287|gb|AAX60885.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008291|gb|AAX60887.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008295|gb|AAX60889.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008297|gb|AAX60890.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008299|gb|AAX60891.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008301|gb|AAX60892.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008303|gb|AAX60893.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008305|gb|AAX60894.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008307|gb|AAX60895.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008309|gb|AAX60896.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008311|gb|AAX60897.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008313|gb|AAX60898.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008315|gb|AAX60899.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008317|gb|AAX60900.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008319|gb|AAX60901.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008323|gb|AAX60903.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008325|gb|AAX60904.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008329|gb|AAX60906.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008331|gb|AAX60907.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008333|gb|AAX60908.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008335|gb|AAX60909.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008341|gb|AAX60912.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008343|gb|AAX60913.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008345|gb|AAX60914.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008347|gb|AAX60915.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008349|gb|AAX60916.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008351|gb|AAX60917.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008353|gb|AAX60918.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008355|gb|AAX60919.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008357|gb|AAX60920.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008359|gb|AAX60921.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008361|gb|AAX60922.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008363|gb|AAX60923.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008365|gb|AAX60924.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008367|gb|AAX60925.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008369|gb|AAX60926.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008371|gb|AAX60927.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008373|gb|AAX60928.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008375|gb|AAX60929.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008377|gb|AAX60930.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008381|gb|AAX60932.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008387|gb|AAX60935.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008389|gb|AAX60936.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008391|gb|AAX60937.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008393|gb|AAX60938.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008399|gb|AAX60941.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008401|gb|AAX60942.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008403|gb|AAX60943.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008405|gb|AAX60944.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008409|gb|AAX60946.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008411|gb|AAX60947.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008413|gb|AAX60948.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008415|gb|AAX60949.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008417|gb|AAX60950.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008419|gb|AAX60951.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008421|gb|AAX60952.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008423|gb|AAX60953.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008425|gb|AAX60954.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008427|gb|AAX60955.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008429|gb|AAX60956.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008431|gb|AAX60957.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008433|gb|AAX60958.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008437|gb|AAX60960.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008439|gb|AAX60961.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008441|gb|AAX60962.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008443|gb|AAX60963.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008445|gb|AAX60964.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008447|gb|AAX60965.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008449|gb|AAX60966.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008453|gb|AAX60968.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008457|gb|AAX60970.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008461|gb|AAX60972.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008463|gb|AAX60973.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008465|gb|AAX60974.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008467|gb|AAX60975.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008471|gb|AAX60977.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008473|gb|AAX60978.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008475|gb|AAX60979.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008481|gb|AAX60982.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008483|gb|AAX60983.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008485|gb|AAX60984.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008487|gb|AAX60985.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008497|gb|AAX60990.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008499|gb|AAX60991.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008501|gb|AAX60992.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008503|gb|AAX60993.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008505|gb|AAX60994.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008507|gb|AAX60995.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008509|gb|AAX60996.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008511|gb|AAX60997.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008513|gb|AAX60998.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008515|gb|AAX60999.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008517|gb|AAX61000.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008519|gb|AAX61001.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008521|gb|AAX61002.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008523|gb|AAX61003.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008525|gb|AAX61004.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008527|gb|AAX61005.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008529|gb|AAX61006.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008531|gb|AAX61007.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008533|gb|AAX61008.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008535|gb|AAX61009.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008537|gb|AAX61010.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008539|gb|AAX61011.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008543|gb|AAX61013.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008545|gb|AAX61014.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008547|gb|AAX61015.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008549|gb|AAX61016.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008551|gb|AAX61017.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008553|gb|AAX61018.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008555|gb|AAX61019.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008559|gb|AAX61021.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008561|gb|AAX61022.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008565|gb|AAX61024.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008567|gb|AAX61025.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008569|gb|AAX61026.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008571|gb|AAX61027.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008573|gb|AAX61028.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008577|gb|AAX61030.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008579|gb|AAX61031.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008581|gb|AAX61032.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008583|gb|AAX61033.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008585|gb|AAX61034.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008587|gb|AAX61035.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008589|gb|AAX61036.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008591|gb|AAX61037.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008593|gb|AAX61038.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008595|gb|AAX61039.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008597|gb|AAX61040.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008599|gb|AAX61041.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008601|gb|AAX61042.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008605|gb|AAX61044.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008607|gb|AAX61045.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008609|gb|AAX61046.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008613|gb|AAX61048.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008615|gb|AAX61049.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008617|gb|AAX61050.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008621|gb|AAX61052.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008623|gb|AAX61053.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008625|gb|AAX61054.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008627|gb|AAX61055.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008631|gb|AAX61057.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008633|gb|AAX61058.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008635|gb|AAX61059.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008637|gb|AAX61060.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008639|gb|AAX61061.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008641|gb|AAX61062.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008643|gb|AAX61063.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008645|gb|AAX61064.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008649|gb|AAX61066.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008653|gb|AAX61068.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008657|gb|AAX61070.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008659|gb|AAX61071.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008663|gb|AAX61073.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008665|gb|AAX61074.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008667|gb|AAX61075.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008669|gb|AAX61076.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008671|gb|AAX61077.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008673|gb|AAX61078.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008675|gb|AAX61079.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008677|gb|AAX61080.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008679|gb|AAX61081.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008681|gb|AAX61082.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008683|gb|AAX61083.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008685|gb|AAX61084.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008687|gb|AAX61085.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008689|gb|AAX61086.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008691|gb|AAX61087.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008695|gb|AAX61089.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008699|gb|AAX61091.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008701|gb|AAX61092.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008703|gb|AAX61093.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008705|gb|AAX61094.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008707|gb|AAX61095.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008711|gb|AAX61097.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008713|gb|AAX61098.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008715|gb|AAX61099.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008717|gb|AAX61100.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008719|gb|AAX61101.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008721|gb|AAX61102.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008723|gb|AAX61103.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008725|gb|AAX61104.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008727|gb|AAX61105.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008729|gb|AAX61106.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008731|gb|AAX61107.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008733|gb|AAX61108.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008735|gb|AAX61109.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008737|gb|AAX61110.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008743|gb|AAX61113.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008745|gb|AAX61114.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008747|gb|AAX61115.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008749|gb|AAX61116.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008751|gb|AAX61117.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008753|gb|AAX61118.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008755|gb|AAX61119.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008757|gb|AAX61120.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008759|gb|AAX61121.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|62008245|gb|AAX60864.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|62008495|gb|AAX60989.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPL-PMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|62008619|gb|AAX61051.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPL-PMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|195115661|ref|XP_002002375.1| GI17350 [Drosophila mojavensis]
 gi|193912950|gb|EDW11817.1| GI17350 [Drosophila mojavensis]
          Length = 528

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 40/204 (19%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I +++++ ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSSQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKHQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            +G+   +KLEKADILELTV+H Q+ R     A N      ++RAG+T CA EV++ LA 
Sbjct: 89  GDGQAKHTKLEKADILELTVRHFQRHRNLDDPAVN------KYRAGYTDCAREVARYLAT 142

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMD-KISPLSVRVMDVCTPPPSPHSD 168
                       + PG   R    L+ HL Q + E+D +I P S       T  P+  S 
Sbjct: 143 PEPPPMGNMPTLAEPGSKAR----LLRHLDQCIAEIDVEICPHSATA--AFTESPNSSST 196

Query: 169 TYSMPLTPASSGSSQVDTCDYTSQ 192
            + +  TPA  G     + DY+SQ
Sbjct: 197 CFDIKKTPAQPGEEH--SLDYSSQ 218


>gi|301608640|ref|XP_002933889.1| PREDICTED: transcription factor HES-2 [Xenopus (Silurana)
           tropicalis]
          Length = 191

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 23/184 (12%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP++E++RRARIN  L++LK L++  +  +    SKLEKADILE+TV+ L+ + 
Sbjct: 27  ELRKTLKPLMEKRRRARINESLNQLKTLILPLIGKDNSRYSKLEKADILEMTVRFLRDI- 85

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
                A NP   ADR++ G+  C   +S  L  +  +      +L++HL QR  E+    
Sbjct: 86  -PPVPAQNP---ADRYKEGYRACVERLSAILNKSHVLTGEASNRLLNHL-QRSPEL---- 136

Query: 150 PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSP----KSV 205
                    C  PP  HS    + ++P    +SQ+++    +Q   +   P P     S+
Sbjct: 137 -----CCSDCHHPPKSHSPRIVLHVSPR---TSQLES-PLLNQPSSHRPAPCPPQLNSSI 187

Query: 206 WRPW 209
           WRPW
Sbjct: 188 WRPW 191


>gi|62008147|gb|AAX60815.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008163|gb|AAX60823.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008173|gb|AAX60828.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008327|gb|AAX60905.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008339|gb|AAX60911.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008379|gb|AAX60931.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008563|gb|AAX61023.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008651|gb|AAX61067.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMXVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|62008451|gb|AAX60967.1| enhancer of split m5 protein [Drosophila melanogaster]
 gi|62008739|gb|AAX61111.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q    +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQXAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|62008395|gb|AAX60939.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L+  A     + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLV--AXXXGDDAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPL-PMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|62008293|gb|AAX60888.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVX 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|405978821|gb|EKC43182.1| Transcription factor HES-1 [Crassostrea gigas]
          Length = 543

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 1/110 (0%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP  ERKRR RIN+CL +LK L+  A   + +   +LEKADILE+ V HL  M  +    
Sbjct: 281 KPQTERKRRERINKCLGQLKCLVFRATGKDEKKYPRLEKADILEMAVNHLYTMNAKDSKQ 340

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
                D DR+R G++ C  EV +CL    GID+   T L++HL   L+ +
Sbjct: 341 GTEEAD-DRYREGYSHCIGEVLQCLRFERGIDVVTKTNLINHLTVSLSHL 389


>gi|403297782|ref|XP_003939731.1| PREDICTED: transcription factor HES-2 [Saimiri boliviensis
           boliviensis]
          Length = 213

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 5/147 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  + SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSSYSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
                 + PV   D +R G++ C   ++  L +   ++  +  +L+ HL +R       +
Sbjct: 72  ASSWPMAAPV-PCDSYREGYSACVARLAHVLPACRVLEPAVSARLLEHLWRR---AAGAT 127

Query: 150 PLSVRVMDVCTP-PPSPHSDTYSMPLT 175
           P   R  D   P  P+P S + S P +
Sbjct: 128 PDGGRAGDSGGPSAPTPESASASQPAS 154


>gi|348501252|ref|XP_003438184.1| PREDICTED: transcription cofactor HES-6-like [Oreochromis
           niloticus]
          Length = 219

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 28/201 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM--R 89
           RK+ KP++E+KRRARIN  L ELK L+     A+ +  SK+E A++LE+ V+ ++ +  R
Sbjct: 24  RKIRKPLVEKKRRARINESLQELKVLI-----ADEDFQSKMENAEVLEMAVKRVEGVLQR 78

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL----NEM 145
           R Q + S      +RF AG+  C ++V   +++ PGID  +  +L+ HL + +    NE 
Sbjct: 79  RAQEVDSVHRDVCERFAAGYIQCMHDVHTFVSNCPGIDPTVAAELLKHLLESMPLNNNEY 138

Query: 146 DKI--------SPL---------SVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCD 188
            ++        SP          S+    V   P +  SD     L    S  SQV + +
Sbjct: 139 HRVMLPDIVAYSPGYNSTWSLSESIHTALVSPAPSTTSSDDLCSDLDETDSEQSQVSSEE 198

Query: 189 YTSQYKMYESMPSPKSVWRPW 209
                +    +   K++WRPW
Sbjct: 199 EADGQEALSCLTCSKALWRPW 219


>gi|345328617|ref|XP_001506283.2| PREDICTED: transcription cofactor HES-6-like [Ornithorhynchus
           anatinus]
          Length = 222

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 33/204 (16%)

Query: 32  RKVM-KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           RKV  KP++E+KRRARIN  L EL+ ++  A        +K+E A++LELTV+ +Q + +
Sbjct: 26  RKVKGKPLVEKKRRARINESLQELRLILADA-------ETKMENAEVLELTVKRVQGILQ 78

Query: 91  QQRLASNPV--TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR--LNE-- 144
            + L ++ +    ++RF AG+  C +EV   ++S PGID  +  +L++HL +   LNE  
Sbjct: 79  NRSLETDKLHREASERFAAGYIQCMHEVHTFVSSCPGIDATIAAELLNHLLESMPLNEGS 138

Query: 145 -----MDKIS-PLSV------------RVMDVCTPPPSPHSDTYSMPLTPASSGSS-QVD 185
                +D +S P  +            ++     P P+P  +  S P  P    S    D
Sbjct: 139 FQDLLVDALSDPAGICSSAGLAPAALSQLAGPLAPSPAPSEEVGSDPEDPDGELSPVSPD 198

Query: 186 TCDYTSQYKMYESMPSPKSVWRPW 209
             D TS+     +  + KS+WRPW
Sbjct: 199 GLDPTSRTHNLPNASASKSMWRPW 222


>gi|282161382|gb|ADA79647.1| HesC HES family bHLH transcription factor [Patiria miniata]
          Length = 286

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 1/115 (0%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ- 91
           K  K M+ERKRRARIN  L +LK L+  AL+ E     K+EKADILE+TV++L++++   
Sbjct: 17  KTSKHMMERKRRARINDSLLQLKSLIFPALRKEMSRQPKMEKADILEMTVRYLKEVQSSA 76

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           Q   ++P     ++ AG++ C  E S  LA+   +DL    ++M+HL  R + ++
Sbjct: 77  QSGRTSPAAQITQYHAGYSECLGETSSFLANCDSVDLDTRLRIMNHLADRCSSLE 131


>gi|62008655|gb|AAX61069.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 7/123 (5%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE     
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAA--- 65

Query: 85  LQKMRRQQRLASNPVT--DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           L  MR+Q      PV+    D F+ G+    +E+S+ +A TP + + +G  +M+HLG   
Sbjct: 66  LVFMRKQVVXXXAPVSPLPMDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEF 125

Query: 143 NEM 145
             M
Sbjct: 126 QRM 128


>gi|47224851|emb|CAG06421.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 222

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 103/201 (51%), Gaps = 30/201 (14%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQK-MRR 90
           RK+ KP++E+KRRARIN  L EL+ L+     A+ +  SK+E A++LE+TV+ ++  +  
Sbjct: 28  RKIRKPLVEKKRRARINESLRELRTLL-----ADADIHSKMENAEVLEMTVKKVEDILSS 82

Query: 91  QQRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ--RLNE--- 144
           Q R       DA +RF AG+  C +EV   ++S PGID  +  +L++HL +   LNE   
Sbjct: 83  QSRETETLNRDANERFAAGYIQCMHEVHMFVSSCPGIDATVAAELLNHLLECMPLNEDHL 142

Query: 145 ----MDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSG------SSQVDTCDYTSQYK 194
               MD IS  +       T   SP   + S  L+PA S       SS +D  D      
Sbjct: 143 QDTLMDLISDTAGGHGATLT-SGSPEGRSPSSVLSPAPSTTSSEDLSSDLDETDSEHNQS 201

Query: 195 MYES-------MPSPKSVWRP 208
             E        + SP+S+WRP
Sbjct: 202 STEGLEHREGLLASPRSMWRP 222


>gi|62008191|gb|AAX60837.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPXMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|17933606|ref|NP_525094.1| HES-related [Drosophila melanogaster]
 gi|7293434|gb|AAF48810.1| HES-related [Drosophila melanogaster]
 gi|66571142|gb|AAY51536.1| IP01491p [Drosophila melanogaster]
 gi|220943372|gb|ACL84229.1| Her-PA [synthetic construct]
 gi|220953334|gb|ACL89210.1| Her-PA [synthetic construct]
          Length = 149

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 6/101 (5%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           SR++QYR+V KPM+ERKRR+RINRCLD +KDL+      +GE ++K++  D+LEL V HL
Sbjct: 16  SRSHQYREVFKPMMERKRRSRINRCLDFIKDLLQEVSHLDGETMAKMDMGDVLELAVHHL 75

Query: 86  QKMRRQQRLASNPVTDA------DRFRAGFTTCANEVSKCL 120
            K        +   T        D + +GF  C  EVS+ L
Sbjct: 76  SKKNCPVATPTTAPTSGVYQSPIDCYWSGFRECVLEVSQFL 116


>gi|327267185|ref|XP_003218383.1| PREDICTED: transcription cofactor HES-6-like [Anolis carolinensis]
          Length = 231

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 45/215 (20%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E+KRRARIN  L EL+ ++     A+ E  SK+E A++LELTV+ +Q + +Q
Sbjct: 25  RRARKPLVEKKRRARINESLQELRLIL-----ADTEFQSKMENAEVLELTVKRVQGILQQ 79

Query: 92  QRLASNPVTD------ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR--LN 143
            R   +P  D      ++RF AG+  C +EV   ++S PGID  +  +L++HL +   LN
Sbjct: 80  SR---SPDDDKLQREASERFAAGYIQCMHEVHTFVSSCPGIDSTIAAELLNHLLESMPLN 136

Query: 144 EMDKISPLSVRVMDVC------------TPPPSPHSDTYSMPLTPASSGSSQVDTCDYTS 191
           E      L+  ++D              T   SP +     P +P  S SS  + C    
Sbjct: 137 EGSFQDLLADVLLDPSLGQWPSSEGTPQTAGASPGALNLLSPASPLRSPSSSEEMCSDLE 196

Query: 192 QYKMYES--------------MPS---PKSVWRPW 209
             +  +S              +PS    KSVWRPW
Sbjct: 197 DAETEQSHISLDGLDRSRTPNLPSSNLSKSVWRPW 231


>gi|62008469|gb|AAX60976.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA+ LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEXLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|405958249|gb|EKC24394.1| Transcription factor HES-1 [Crassostrea gigas]
          Length = 279

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 1/110 (0%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP  ERKRR +IN+CL +LK L+  A   + +   +LEKADILE+ V HL  M  +    
Sbjct: 17  KPQTERKRREKINKCLGQLKCLVFRATGKDEKKYPRLEKADILEMAVNHLYTMNAKDSKQ 76

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
                D DR+R G++ C  EV +CL    GID+   T L++HL   L+ +
Sbjct: 77  GTEEAD-DRYREGYSHCIGEVLQCLRFERGIDVVTKTNLINHLTVSLSHL 125


>gi|307198205|gb|EFN79220.1| Transcription factor HES-4 [Harpegnathos saltator]
          Length = 482

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 36/176 (20%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ
Sbjct: 57  RRANKPLMEKRRRARINQSLAALKALILDSARLENTKHSKLEKADILELTVRHLQ---RQ 113

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCL-------ASTPGIDLRLGTKLMSHLGQRLNE 144
           + LA   ++   R++AG+  C+ EVS+ L        +T  +D  +  +L+ HL   ++E
Sbjct: 114 RSLAQPGLS---RYKAGYQDCSREVSRYLDAPDIITGNTTPMDPAVKQRLLRHLDSCVSE 170

Query: 145 MD-----------KISPLSV--RVMDVCTPPP---------SPHSDTYSMPLTPAS 178
           +D             SP SV  RV    +P P          PH  T +  LTPA 
Sbjct: 171 LDLDLGSRPDSGLGSSPGSVTDRVAGATSPGPLDHHVGGPVGPHCSTAAT-LTPAG 225


>gi|158300226|ref|XP_320206.4| AGAP012346-PA [Anopheles gambiae str. PEST]
 gi|157013056|gb|EAA00777.5| AGAP012346-PA [Anopheles gambiae str. PEST]
          Length = 351

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 4/112 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK  KP++E+KRRARIN  L++LK L++ A++ +    SKLEKADIL+LTV+HLQ + 
Sbjct: 28  EIRKTNKPIMEKKRRARINNYLNDLKSLLLDAMKKDPVRHSKLEKADILDLTVKHLQDVE 87

Query: 90  RQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           R++    +A +P T  ++F  G+  C +E+ K   S   +D  L  ++  HL
Sbjct: 88  RRRLNVAMAVDP-TVPEKFANGYRECIDEIGKYFDSLGSVDEGLKARVRKHL 138


>gi|194892319|ref|XP_001977639.1| GG18139 [Drosophila erecta]
 gi|190649288|gb|EDV46566.1| GG18139 [Drosophila erecta]
          Length = 146

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 4/97 (4%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           SR++ YRKV KP+LE+KRRARINR ++++KDL+      + E ++K+EKAD+LEL + HL
Sbjct: 19  SRSHHYRKVFKPLLEKKRRARINRSVEDMKDLLQEVTHLDAEALAKMEKADVLELAIHHL 78

Query: 86  QKMRRQQRLASNPVTDA--DRFRAGFTTCANEVSKCL 120
           +  R+    A++ V  +  D +  GF  C  EV + L
Sbjct: 79  R--RKHNPAATSGVYQSPMDSYWCGFRECVLEVFEIL 113


>gi|296206586|ref|XP_002750279.1| PREDICTED: transcription factor HES-2 [Callithrix jacchus]
          Length = 173

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 18/180 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  + SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSSYSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
                 + PV   D +R G++ C   ++  L +   +D  +  +L+ HL +R       +
Sbjct: 72  ASSWPMAAPVP-CDSYREGYSACVARLAHVLPACRVLDPAVSARLLEHLWRR---AAGAT 127

Query: 150 PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           P   R  D   P         S P TPAS+ + Q  +    S             +WRPW
Sbjct: 128 PDGGRAGDSGGP---------SAP-TPASASAPQPASLPMPSPPSPPCG----SGLWRPW 173


>gi|195385701|ref|XP_002051543.1| GJ16129 [Drosophila virilis]
 gi|194148000|gb|EDW63698.1| GJ16129 [Drosophila virilis]
          Length = 515

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 38/204 (18%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I +++++ ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSSQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKHQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            +G+   +KLEKADILELTV+H Q+ R       +P T  +++RAG+T CA EV++ LA 
Sbjct: 89  GDGQAKHTKLEKADILELTVRHFQRHRN----LDDP-TAVNKYRAGYTDCAREVARYLAT 143

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMD-KISPLSVRVMDVCTPPPSPHSD 168
                       + PG   R    L+ HL Q + E+D +I P +    +    P S    
Sbjct: 144 PEPPPMGNMPTLAEPGSKAR----LLRHLDQCIAEIDVEICPHTTTAANFAESPNSSSRT 199

Query: 169 TYSMPLTPASSGSSQVDTCDYTSQ 192
            + +  TPA    ++  + DY+SQ
Sbjct: 200 CFDIKKTPA---PTEEHSLDYSSQ 220


>gi|326537173|emb|CBX36138.1| hairy-3 protein [Glomeris marginata]
          Length = 263

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 10/102 (9%)

Query: 45  ARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNPVT-DA- 102
           ARIN+ L ELK+L++ A++ +    SKLEKADILE+ V+HLQ + +      NP T DA 
Sbjct: 1   ARINKSLSELKNLILDAMKKDPSRTSKLEKADILEMAVRHLQSLHK------NPQTPDAK 54

Query: 103 --DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
             + +RAG+  C  EV++ LA+ P +D+   T L+ HL  RL
Sbjct: 55  VMNEYRAGYNECTREVTRFLATAPNVDVTTRTDLLGHLANRL 96


>gi|62008407|gb|AAX60945.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+ + +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDSFKNGYMNAVSEIXRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|110758644|ref|XP_001121191.1| PREDICTED: hypothetical protein LOC725331 [Apis mellifera]
          Length = 560

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 13/122 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ
Sbjct: 60  RRANKPLMEKRRRARINQSLAALKALILDSARLENTKHSKLEKADILELTVRHLQ---RQ 116

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCL-------ASTPGIDLRLGTKLMSHLGQRLNE 144
           + LA   ++   R++AG+  C+ EVS+ L        +T  +D  +  +L+ HL   ++E
Sbjct: 117 RSLAQPGLS---RYKAGYQDCSREVSRYLDAPDIITGNTTPMDPAVKQRLLRHLDSCVSE 173

Query: 145 MD 146
           +D
Sbjct: 174 LD 175


>gi|171460978|ref|NP_001116354.1| transcription factor HES-2 [Xenopus laevis]
 gi|76162890|gb|ABA40833.1| Hes2 [Xenopus laevis]
          Length = 191

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 27/186 (14%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP++E++RRARIN  L++LK L++  +  +    SKLEKADILE+TV+ L+ + 
Sbjct: 27  ELRKTLKPLMEKRRRARINESLNQLKTLILPLIGKDNSRYSKLEKADILEMTVRFLRDIP 86

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
             Q  A NP   ADR++ G+  C   +S  L  +  +      +L+ +L QR  E+    
Sbjct: 87  PVQ--AQNP---ADRYKEGYRACVERLSAILGKSHVLTGEASNRLLEYL-QRSPEL---- 136

Query: 150 PLSVRVMDVCTPPPSPHSDTYSMPLTPASS--GSSQVDTCDYTSQYKMYESMPSP----K 203
                    C  PP P      + ++P +S  GS         +Q   +   P P     
Sbjct: 137 -----CSSDCNHPPKPQRPRIVLQVSPRTSQFGSP------LQNQPSSHRPAPCPPQLNS 185

Query: 204 SVWRPW 209
           S+WRPW
Sbjct: 186 SIWRPW 191


>gi|332021122|gb|EGI61509.1| Transcription factor HES-4 [Acromyrmex echinatior]
          Length = 448

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 30/171 (17%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ
Sbjct: 54  RRANKPLMEKRRRARINQSLAALKALILDSARLENTKHSKLEKADILELTVRHLQ---RQ 110

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCL-------ASTPGIDLRLGTKLMSHLGQRLNE 144
           + LA   ++   R++AG+  C+ EVS+ L        +T  +D  +  +L+ HL   ++E
Sbjct: 111 RSLAQPGLS---RYKAGYQDCSREVSRYLDAPDIITGNTTPMDPAVKQRLLRHLDSCVSE 167

Query: 145 MD-----------KISPLSV--RVMDVCTPPPSPH----SDTYSMPLTPAS 178
           +D             SP SV  RV    +P P  H        S  LTPA 
Sbjct: 168 LDLDLGSRPDSGLGSSPGSVTDRVAGTTSPGPLDHHVPVGPHCSAALTPAG 218


>gi|47271429|ref|NP_919381.2| hairy and enhancer of split 6 [Danio rerio]
 gi|38383026|gb|AAH62387.1| Hairy and enhancer of split 6 (Drosophila) [Danio rerio]
 gi|41351016|gb|AAH65599.1| Hairy and enhancer of split 6 (Drosophila) [Danio rerio]
 gi|68051188|dbj|BAE02547.1| hairy-related 13.2 [Danio rerio]
          Length = 226

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 39/212 (18%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E+KRRARIN  L EL+ L+     A+ +   K+E A++LE+TV+ ++ + + 
Sbjct: 20  RKTRKPLVEKKRRARINESLQELRLLL-----ADPDAQVKMENAEVLEMTVKRVESILQN 74

Query: 92  QRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ--RLNEMDK 147
           +   ++ V     +RF AG+  C +EV   ++S PGID  +   L++HL +   LN+ ++
Sbjct: 75  KAKEADSVNREANERFAAGYIQCMHEVHTFVSSCPGIDATIAADLLNHLLECMPLNDEER 134

Query: 148 ISP-LSVRVMD--------------VCTPPPSPHSDTYSMPLTPASSGSSQVDTC----- 187
               LS  + D                +P  +  ++  S  L+PA S +S  D C     
Sbjct: 135 FQDILSDLISDSNNSGTWPGEAAYATLSPGGTSVANGGSSALSPAPSTTSSDDICSDLDD 194

Query: 188 ----------DYTSQYKMYESMPSPKSVWRPW 209
                     D   Q  +  ++ + KS+WRPW
Sbjct: 195 TDTEHSRISVDAGDQAPVVPTLYTNKSIWRPW 226


>gi|340727086|ref|XP_003401882.1| PREDICTED: hypothetical protein LOC100643547 [Bombus terrestris]
          Length = 530

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 13/122 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ
Sbjct: 58  RRANKPLMEKRRRARINQSLAALKALILDSARLENTKHSKLEKADILELTVRHLQ---RQ 114

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCL-------ASTPGIDLRLGTKLMSHLGQRLNE 144
           + LA   ++   R++AG+  C+ EVS+ L        +T  +D  +  +L+ HL   ++E
Sbjct: 115 RSLAQPGLS---RYKAGYQDCSREVSRYLDAPDIITGNTTPMDPAVKQRLLRHLDSCVSE 171

Query: 145 MD 146
           +D
Sbjct: 172 LD 173


>gi|118343727|ref|NP_001071684.1| transcription factor protein [Ciona intestinalis]
 gi|70569304|dbj|BAE06387.1| transcription factor protein [Ciona intestinalis]
          Length = 333

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 77/115 (66%), Gaps = 4/115 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV-SKLEKADILELTVQHLQKMRR 90
           R+  KP++E++RR RIN+ L+ELK +++ AL+ +     SKLEKADILE+TV++L+ ++R
Sbjct: 25  RRASKPLMEKRRRERINKSLNELKSILLHALRKDQSTCHSKLEKADILEMTVRYLRGIQR 84

Query: 91  QQRLASNPVTDA--DRFRAGFTTCANEVSKCLA-STPGIDLRLGTKLMSHLGQRL 142
           Q+  A+  +  +   ++R G+  C NEVS  L  S+  +   + ++L++HLG  L
Sbjct: 85  QRMNAAITLDPSVVSKYRNGYVECKNEVSHFLENSSENVHPDVKSRLINHLGNTL 139


>gi|195432228|ref|XP_002064128.1| GK19874 [Drosophila willistoni]
 gi|194160213|gb|EDW75114.1| GK19874 [Drosophila willistoni]
          Length = 95

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 49/57 (85%)

Query: 26 SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTV 82
          SRTYQYRKVMKP+LE KRRA IN+CLDELK L++  ++ + + ++KLEKADILELTV
Sbjct: 9  SRTYQYRKVMKPLLEIKRRAGINKCLDELKHLIMELIEMDADTLAKLEKADILELTV 65


>gi|350403399|ref|XP_003486792.1| PREDICTED: hypothetical protein LOC100747799 [Bombus impatiens]
          Length = 486

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 13/122 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ
Sbjct: 58  RRANKPLMEKRRRARINQSLAALKALILDSARLENTKHSKLEKADILELTVRHLQ---RQ 114

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCL-------ASTPGIDLRLGTKLMSHLGQRLNE 144
           + LA   ++   R++AG+  C+ EVS+ L        +T  +D  +  +L+ HL   ++E
Sbjct: 115 RSLAQPGLS---RYKAGYQDCSREVSRYLDAPDIITGNTTPMDPAVKQRLLRHLDSCVSE 171

Query: 145 MD 146
           +D
Sbjct: 172 LD 173


>gi|156390540|ref|XP_001635328.1| predicted protein [Nematostella vectensis]
 gi|156222421|gb|EDO43265.1| predicted protein [Nematostella vectensis]
          Length = 133

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 11/133 (8%)

Query: 43  RRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNPVT-- 100
           RRARIN  L+ELK L++ +L  +    SK+EKADILE++VQ+L+++R+Q+   +  ++  
Sbjct: 2   RRARINDSLNELKSLVLQSLNKDASRYSKMEKADILEMSVQYLKEIRKQENSYNGKLSFK 61

Query: 101 --DADRFRAGFTTCANEVSKCLAS--TPGIDLRLGTKLMSHLGQ----RLNEMDKISPLS 152
                 +RAGF  CA EV+K L +  +P  D +L + L++HL              +P  
Sbjct: 62  AHSIAEYRAGFNYCAQEVTKNLTTLESPATD-KLRSNLLNHLANCFQGNTTPGAATTPSG 120

Query: 153 VRVMDVCTPPPSP 165
           V V    +PPPSP
Sbjct: 121 VPVWIYPSPPPSP 133


>gi|120577452|gb|AAI30162.1| LOC100037036 protein [Xenopus laevis]
          Length = 222

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 38/199 (19%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E++RRARIN  L EL+ ++     ++ E  +K+E A++L+LTV+ ++++ R 
Sbjct: 41  RQTRKPLVEKRRRARINESLQELRGIL-----SDNEFQTKIENAEVLDLTVKRVERILRN 95

Query: 92  QRLASNPV--TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
           +   ++ +    ++RF AG+  C +EV   ++S PGID  L  +L++HL + +       
Sbjct: 96  RTAEADRLQREASERFAAGYIQCMHEVHTFVSSCPGIDASLAAELLNHLLESM------- 148

Query: 150 PLSVR-----VMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQY----------- 193
           PLS       VMDV    PS         L     GSS  D+C    +            
Sbjct: 149 PLSEGSLQDLVMDVLLDSPSSEEGCGLGVL-----GSSSEDSCSDMEESEGEKAGIDSVQ 203

Query: 194 ---KMYESMPSPKSVWRPW 209
              +  E  P   ++WRPW
Sbjct: 204 DNGRTPEIQPPASTMWRPW 222


>gi|402852764|ref|XP_003891083.1| PREDICTED: transcription factor HES-2 [Papio anubis]
          Length = 173

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 71/112 (63%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  N SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 + PV   D +R G++ C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  ALSWPTATPVP-CDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRR 122


>gi|313475162|dbj|BAJ41036.1| hairy and enhancer of split transcription factor C [Scaphechinus
           mirabilis]
          Length = 276

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 7/139 (5%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           +  K + ERKRRARIN  L +LK ++  A++ +     K+EKADILE+TV++L+ ++   
Sbjct: 20  RTAKHLTERKRRARINDSLLQLKSMVFPAVRKDISRHPKMEKADILEMTVRYLKDIQSPA 79

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD------ 146
             A N  T    + AGFT C +EVS  ++S   ID+    +L+ HL  R + ++      
Sbjct: 80  AKA-NGETGVTDYHAGFTECLSEVSSFMSSCENIDIETRLRLLGHLADRCSTINDSEQKP 138

Query: 147 KISPLSVRVMDVCTPPPSP 165
            +S L      + TP PSP
Sbjct: 139 DVSRLQAESQQINTPAPSP 157


>gi|31580880|dbj|BAC77544.1| hypothetical protein [Danio rerio]
          Length = 226

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 39/212 (18%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E+KRRARIN  L EL+ L+     A+ +   K E A++LE+TV+ ++ + + 
Sbjct: 20  RKTRKPLVEKKRRARINESLQELRLLL-----ADPDAQVKXENAEVLEMTVKRVESILQN 74

Query: 92  QRLASNPVT--DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ--RLNEMDK 147
           +   ++ V     +RF AG+  C ++V   ++S PGID  +   L++HL +   LN+ ++
Sbjct: 75  KAKEADSVNREANERFAAGYIQCMHDVHTFVSSCPGIDATIAADLLNHLLECMPLNDEER 134

Query: 148 ISP-LSVRVMDVCTPPPSPHSDTY--------------SMPLTPASSGSSQVDTC----- 187
               LS  + D       P    Y              S  L+PA S +S  D C     
Sbjct: 135 FXDILSDLIXDSNNSXTXPGEAAYATLSPGGTSVANGGSSALSPAPSTTSSDDICSDLDD 194

Query: 188 ----------DYTSQYKMYESMPSPKSVWRPW 209
                     D   Q  +  ++ + KS+WRPW
Sbjct: 195 TDTEHSRISVDAGDQAPVVPTLYTNKSIWRPW 226


>gi|297484231|ref|XP_002694183.1| PREDICTED: transcription factor HES-4 isoform 2 [Bos taurus]
 gi|296479094|tpg|DAA21209.1| TPA: hairy and enhancer of split 4-like isoform 2 [Bos taurus]
          Length = 248

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 7/123 (5%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ--- 92
           KP++E++RRARIN  L +L+ L++ AL+ E    SKLEKADILELTV+HLQ +RR Q   
Sbjct: 65  KPVMEKRRRARINESLAQLQSLLLDALRKESSRRSKLEKADILELTVRHLQSLRRVQVTA 124

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG---QRLNEMDKIS 149
            L S+P     ++RAGF  C  EV++ LA   G+   + ++L+ HL     RL    +  
Sbjct: 125 ALRSDPAI-LGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLCHLAACLARLGPARRPL 183

Query: 150 PLS 152
           PL+
Sbjct: 184 PLA 186


>gi|62008185|gb|AAX60834.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D  + G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 69  MRKQVVKQQAPVSPLP-MDXXKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|108996216|ref|XP_001092640.1| PREDICTED: transcription factor HES-2 isoform 2 [Macaca mulatta]
 gi|297281999|ref|XP_002802189.1| PREDICTED: transcription factor HES-2 [Macaca mulatta]
          Length = 173

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 71/112 (63%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  N SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 + PV   D +R G++ C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  ALSWPTAAPVP-CDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRR 122


>gi|209737756|gb|ACI69747.1| Transcription cofactor HES-6 [Salmo salar]
          Length = 236

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 56/222 (25%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELT---VQHLQKM 88
           RK  KP++E+KRRARIN  L EL+ L+        +  SK+E A++LE+T   V+H+ K 
Sbjct: 27  RKARKPLVEKKRRARINESLQELRTLL-------ADTDSKVENAEVLEMTVKKVEHILKD 79

Query: 89  RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ--RLNEMD 146
           R Q+    N    ++RF AG+  C +EV   +++ PGID  +  +L++HL +   LNE D
Sbjct: 80  RPQETDIMNREA-SERFAAGYIQCMHEVHMFVSNCPGIDATVAAELLNHLLECMPLNE-D 137

Query: 147 KISPLSVRVMDVCTPPPSPHSDTY----------------------SMPLTPASSGSSQV 184
               +   VMD+ +   S +  T+                      S  L+PA S +S  
Sbjct: 138 HFQDM---VMDIISDTSSNNGSTWPAGEAVSVALASPGCRSIASGSSSALSPADSNTSSE 194

Query: 185 DTCD------------YTSQYKMYESMPSP-----KSVWRPW 209
           D C              T   +  E+   P     KS+WRPW
Sbjct: 195 DLCSDLYETDSEHNQRATDALENQEAQNIPTITYSKSMWRPW 236


>gi|297666607|ref|XP_002811610.1| PREDICTED: transcription factor HES-2 isoform 1 [Pongo abelii]
          Length = 173

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 71/112 (63%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  N SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 + P+   D +R G++ C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  ASSWPTAAPLP-CDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRR 122


>gi|449279866|gb|EMC87311.1| Transcription cofactor HES-6 [Columba livia]
          Length = 211

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 5/105 (4%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           ++ T + RK+ KP++ERKRR RIN CLD+LK+ +V A   +    SKLEKADILE+TV+H
Sbjct: 13  LASTKEERKLRKPLIERKRRERINNCLDQLKETVVGAFHLDQ---SKLEKADILEMTVKH 69

Query: 85  LQKMRRQQRLASNPVT--DADRFRAGFTTCANEVSKCLASTPGID 127
           LQ ++  + +A + V      R+  G+  C +EV   L +   +D
Sbjct: 70  LQNIQSSKLMADSKVGLEAQQRYSTGYIQCMHEVHNLLLTCEWMD 114


>gi|91083981|ref|XP_975187.1| PREDICTED: similar to transcription factor HES-1 (Hairy and
           enhancer of split 1), putative [Tribolium castaneum]
          Length = 232

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 19/143 (13%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R  + R+  KP++E++RRARIN+ L  LK L++ + +A+    SKLEKADILELTV+H Q
Sbjct: 7   RASEPRRANKPLMEKRRRARINQSLAALKTLILDSAKADNTKHSKLEKADILELTVRHFQ 66

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPG------IDLRLGTKLMSHLGQ 140
           + R      S  +    +++AG+  C  EV + L  TP       +D  +  +L+ HL  
Sbjct: 67  RHR------SLDIKGVHQYKAGYADCVREVQRYL-DTPDAQTMTVVDAGVRQRLLRHLDN 119

Query: 141 RLNEMDKISPLSVRVMDVCTPPP 163
            + E+D      V V +   PPP
Sbjct: 120 CVAEVD------VDVRNAGLPPP 136


>gi|380017532|ref|XP_003692707.1| PREDICTED: uncharacterized protein LOC100865781 [Apis florea]
          Length = 432

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 75/118 (63%), Gaps = 13/118 (11%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ+ LA
Sbjct: 6   KPLMEKRRRARINQSLAALKALILDSARLENTKHSKLEKADILELTVRHLQ---RQRSLA 62

Query: 96  SNPVTDADRFRAGFTTCANEVSKCL-------ASTPGIDLRLGTKLMSHLGQRLNEMD 146
              ++   R++AG+  C+ EVS+ L        +T  +D  +  +L+ HL   ++E+D
Sbjct: 63  QPGLS---RYKAGYQDCSREVSRYLDAPDIITGNTTPMDPAVKQRLLRHLDSCVSELD 117


>gi|270006713|gb|EFA03161.1| hypothetical protein TcasGA2_TC013080 [Tribolium castaneum]
          Length = 344

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 19/143 (13%)

Query: 27  RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
           R  + R+  KP++E++RRARIN+ L  LK L++ + +A+    SKLEKADILELTV+H Q
Sbjct: 119 RASEPRRANKPLMEKRRRARINQSLAALKTLILDSAKADNTKHSKLEKADILELTVRHFQ 178

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPG------IDLRLGTKLMSHLGQ 140
           + R      S  +    +++AG+  C  EV + L  TP       +D  +  +L+ HL  
Sbjct: 179 RHR------SLDIKGVHQYKAGYADCVREVQRYL-DTPDAQTMTVVDAGVRQRLLRHLDN 231

Query: 141 RLNEMDKISPLSVRVMDVCTPPP 163
            + E+D      V V +   PPP
Sbjct: 232 CVAEVD------VDVRNAGLPPP 248


>gi|339249731|ref|XP_003373853.1| transcription factor HES-2 [Trichinella spiralis]
 gi|316969941|gb|EFV53964.1| transcription factor HES-2 [Trichinella spiralis]
          Length = 217

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 10/126 (7%)

Query: 24  PISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV---SKLEKADILEL 80
           P++     RK+ KP++E++RRARIN CL ELK +++ A     +N    SK+EKADILE+
Sbjct: 52  PVATGRMDRKLKKPLMEKRRRARINHCLAELKSILMAADPKADQNSAGQSKVEKADILEM 111

Query: 81  TVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLAST--PGIDLRLGTKLMSHL 138
           TVQ L     +QR+       A+ F  G+TTCAN  +  L +   P     L   LM+HL
Sbjct: 112 TVQLL-----KQRILVGGGEKAEGFIDGYTTCANNAALFLTNVTEPNAGPLLAAGLMTHL 166

Query: 139 GQRLNE 144
            + L E
Sbjct: 167 SRMLEE 172


>gi|226740985|sp|Q00P32.2|HES2_XENLA RecName: Full=Transcription factor HES-2; Short=XHes2; AltName:
           Full=Hairy and enhancer of split 2
          Length = 191

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 27/186 (14%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP++E++RRARIN  L++LK L++  +  +    SKLEKADILE+TV+ L+ + 
Sbjct: 27  ELRKTLKPLMEKRRRARINESLNQLKTLILPLIGKDNSRYSKLEKADILEMTVRFLRDIP 86

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
             Q  A N    ADR++ G+  C   +S  L  +  +      +L+ +L QR  E+    
Sbjct: 87  PVQ--AQN---QADRYKEGYRACVERLSAILGKSHVLTGEASNRLLEYL-QRSPEL---- 136

Query: 150 PLSVRVMDVCTPPPSPHSDTYSMPLTPASS--GSSQVDTCDYTSQYKMYESMPSP----K 203
                    C  PP P      + ++P +S  GS         +Q   +   P P     
Sbjct: 137 -----CSSDCNHPPKPQRPRIVLQVSPRTSQFGSP------LQNQPSSHRPAPCPPQLNS 185

Query: 204 SVWRPW 209
           S+WRPW
Sbjct: 186 SIWRPW 191


>gi|63055047|ref|NP_061962.2| transcription factor HES-2 [Homo sapiens]
 gi|12643954|sp|Q9Y543.1|HES2_HUMAN RecName: Full=Transcription factor HES-2; AltName: Full=Class B
           basic helix-loop-helix protein 40; Short=bHLHb40;
           AltName: Full=Hairy and enhancer of split 2
 gi|119591939|gb|EAW71533.1| hairy and enhancer of split 2 (Drosophila), isoform CRA_a [Homo
           sapiens]
 gi|124376540|gb|AAI32699.1| Hairy and enhancer of split 2 (Drosophila) [Homo sapiens]
 gi|148745665|gb|AAI42688.1| HES2 protein [Homo sapiens]
 gi|187950493|gb|AAI36964.1| Hairy and enhancer of split 2 (Drosophila) [Homo sapiens]
 gi|193786963|dbj|BAG52286.1| unnamed protein product [Homo sapiens]
          Length = 173

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 71/112 (63%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  N SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 + P+   D +R G++ C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  ASSWPTAAPLP-CDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRR 122


>gi|208966426|dbj|BAG73227.1| hairy and enhancer of split 2 [synthetic construct]
          Length = 173

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 71/112 (63%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  N SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 + P+   D +R G++ C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  ASSWPTAAPLP-CDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRR 122


>gi|426327611|ref|XP_004024610.1| PREDICTED: transcription factor HES-2 [Gorilla gorilla gorilla]
          Length = 173

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 71/112 (63%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  N SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 + P+   D +R G++ C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  ASSWPTAAPLP-CDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRR 122


>gi|125985249|ref|XP_001356388.1| GA10322 [Drosophila pseudoobscura pseudoobscura]
 gi|54644711|gb|EAL33451.1| GA10322 [Drosophila pseudoobscura pseudoobscura]
          Length = 497

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 54/210 (25%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I ++++T ++   Q IS+     +  KP++E++RRARIN+ L  LK L++      +A  
Sbjct: 35  IGLVSSTQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKSQSAKN 89

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLAS 122
            EG+   +KLEKADILELTV+H Q+ R     + N      ++RAG+T CA EV++ LA 
Sbjct: 90  GEGQAKHTKLEKADILELTVRHFQRHRNLDDPSVN------KYRAGYTDCAREVARYLA- 142

Query: 123 TP-----GIDLRLG-----TKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSM 172
           TP     G    LG      +L+ HL Q + E+D         +++C     PHS T + 
Sbjct: 143 TPEPPPMGSMPTLGEPGSKARLLRHLDQCIAEID---------VEIC-----PHS-TANF 187

Query: 173 PLTPASSG--------SSQVD--TCDYTSQ 192
             +P+SS          SQ D  + DY+SQ
Sbjct: 188 VESPSSSSCFDLNNSKKSQPDEHSLDYSSQ 217


>gi|195147096|ref|XP_002014516.1| GL18909 [Drosophila persimilis]
 gi|194106469|gb|EDW28512.1| GL18909 [Drosophila persimilis]
          Length = 497

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 54/210 (25%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I ++++T ++   Q IS+     +  KP++E++RRARIN+ L  LK L++      +A  
Sbjct: 35  IGLVSSTQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKSQSAKN 89

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLAS 122
            EG+   +KLEKADILELTV+H Q+ R     + N      ++RAG+T CA EV++ LA 
Sbjct: 90  GEGQAKHTKLEKADILELTVRHFQRHRNLDDPSVN------KYRAGYTDCAREVARYLA- 142

Query: 123 TP-----GIDLRLG-----TKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSM 172
           TP     G    LG      +L+ HL Q + E+D         +++C     PHS T + 
Sbjct: 143 TPEPPPMGSMPTLGEPGSKARLLRHLDQCIAEID---------VEIC-----PHS-TANF 187

Query: 173 PLTPASSG--------SSQVD--TCDYTSQ 192
             +P+SS          SQ D  + DY+SQ
Sbjct: 188 VESPSSSSCFDLNNSKKSQPDEHSLDYSSQ 217


>gi|54035142|gb|AAH84134.1| LOC495039 protein [Xenopus laevis]
 gi|62185699|gb|AAH92348.1| LOC495039 protein [Xenopus laevis]
          Length = 202

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 27/186 (14%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP++E++RRARIN  L++LK L++  +  +    SKLEKADILE+TV+ L+ + 
Sbjct: 38  ELRKTLKPLMEKRRRARINESLNQLKTLILPLIGKDNSRYSKLEKADILEMTVRFLRDIP 97

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
             Q  A N    ADR++ G+  C   +S  L  +  +      +L+ +L QR  E+    
Sbjct: 98  PVQ--AQN---QADRYKEGYRACVERLSAILGKSHVLTGEASNRLLEYL-QRSPEL---- 147

Query: 150 PLSVRVMDVCTPPPSPHSDTYSMPLTPASS--GSSQVDTCDYTSQYKMYESMPSP----K 203
                    C  PP P      + ++P +S  GS         +Q   +   P P     
Sbjct: 148 -----CSSDCNHPPKPQRPRIVLQVSPRTSQFGSP------LQNQPSSHRPAPCPPQLNS 196

Query: 204 SVWRPW 209
           S+WRPW
Sbjct: 197 SIWRPW 202


>gi|194879831|ref|XP_001974311.1| GG21149 [Drosophila erecta]
 gi|190657498|gb|EDV54711.1| GG21149 [Drosophila erecta]
          Length = 509

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 64/215 (29%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I ++++T ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSTQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKSQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            EG+   +KLEKADILELTV+H Q+ R       +P    +++RAG+T CA EV++ LA 
Sbjct: 89  GEGQAKHTKLEKADILELTVRHFQRHRN----LDDPTV--NKYRAGYTDCAREVARYLAT 142

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDT 169
                       + PG   R    L+ HL Q + E+D         +++C     PHS  
Sbjct: 143 PEPPPMGTMPTLAEPGSKAR----LLRHLDQCIAEID---------VEIC-----PHS-- 182

Query: 170 YSMPLTPASSGSSQVD------------TCDYTSQ 192
            + P   + S SS  D            + DY+SQ
Sbjct: 183 -TAPFAESPSSSSCFDLNQAKKSQPEEHSLDYSSQ 216


>gi|195580047|ref|XP_002079867.1| GD24173 [Drosophila simulans]
 gi|194191876|gb|EDX05452.1| GD24173 [Drosophila simulans]
          Length = 507

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 50/190 (26%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I ++++T ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSTQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKSQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            EG+   +KLEKADILELTV+H Q+ R       +P    +++RAG+T CA EV++ LA 
Sbjct: 89  GEGQAKHTKLEKADILELTVRHFQRHRN----LDDPTV--NKYRAGYTDCAREVARYLAT 142

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDT 169
                       + PG   R    L+ HL Q + E+D         +++C     PHS T
Sbjct: 143 PEPPPMGTMPTLAEPGSKAR----LLRHLDQCIAEID---------VEIC-----PHS-T 183

Query: 170 YSMPLTPASS 179
            +   +P+SS
Sbjct: 184 AAFAESPSSS 193


>gi|17737431|ref|NP_523599.1| similar to deadpan [Drosophila melanogaster]
 gi|7298522|gb|AAF53741.1| similar to deadpan [Drosophila melanogaster]
 gi|16768240|gb|AAL28339.1| GH26014p [Drosophila melanogaster]
 gi|220952778|gb|ACL88932.1| Side-PA [synthetic construct]
          Length = 507

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 50/190 (26%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I ++++T ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSTQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKTQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            EG+   +KLEKADILELTV+H Q+ R       +P    +++RAG+T CA EV++ LA 
Sbjct: 89  GEGQAKHTKLEKADILELTVRHFQRHRN----LDDPTV--NKYRAGYTDCAREVARYLAT 142

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDT 169
                       + PG   R    L+ HL Q + E+D         +++C     PHS T
Sbjct: 143 PEPPPMGTMPTLAEPGSKAR----LLRHLDQCIAEID---------VEIC-----PHS-T 183

Query: 170 YSMPLTPASS 179
            +   +P+SS
Sbjct: 184 AAFAESPSSS 193


>gi|195484328|ref|XP_002090647.1| GE13222 [Drosophila yakuba]
 gi|194176748|gb|EDW90359.1| GE13222 [Drosophila yakuba]
          Length = 507

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 50/190 (26%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I ++++T ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSTQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKSQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            EG+   +KLEKADILELTV+H Q+ R       +P    +++RAG+T CA EV++ LA 
Sbjct: 89  GEGQAKHTKLEKADILELTVRHFQRHRN----LDDPTV--NKYRAGYTDCAREVARYLAT 142

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDT 169
                       + PG   R    L+ HL Q + E+D         +++C     PHS T
Sbjct: 143 PEPPPMGTMPTLAEPGSKAR----LLRHLDQCIAEID---------VEIC-----PHS-T 183

Query: 170 YSMPLTPASS 179
            +   +P+SS
Sbjct: 184 AAFAESPSSS 193


>gi|195438401|ref|XP_002067125.1| GK24825 [Drosophila willistoni]
 gi|194163210|gb|EDW78111.1| GK24825 [Drosophila willistoni]
          Length = 514

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 53/190 (27%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMV------TALQAEGE-NVSKLEKADILELTVQH 84
           ++  KP++E++RRARIN+ L  LK L++       A   +G+   +KLEKADILELTV+H
Sbjct: 54  KRTNKPLMEKRRRARINQSLAILKALILESTKNQNAKNGDGQAKHTKLEKADILELTVRH 113

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA-------------STPGIDLRLG 131
            Q+ R     + N      ++RAG+T CA EV++ LA             S PG   R  
Sbjct: 114 FQRHRNLDDPSVN------KYRAGYTDCAREVARYLATPEPPPLGNMPTLSEPGSKAR-- 165

Query: 132 TKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASS-------GSSQV 184
             L+ HL Q + E+D         +++C     PH++T +   +P+SS        SS  
Sbjct: 166 --LLRHLDQCIAEID---------VEIC-----PHTNTANFADSPSSSSCYDMNNSSSAQ 209

Query: 185 D--TCDYTSQ 192
           D  + DY+SQ
Sbjct: 210 DEHSLDYSSQ 219


>gi|195344985|ref|XP_002039056.1| GM17313 [Drosophila sechellia]
 gi|194134186|gb|EDW55702.1| GM17313 [Drosophila sechellia]
          Length = 507

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 50/190 (26%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I ++++T ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSTQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKSQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            EG+   +KLEKADILELTV+H Q+ R       +P    +++RAG+T CA EV++ LA 
Sbjct: 89  GEGQAKHTKLEKADILELTVRHFQRHRN----LDDPTV--NKYRAGYTDCAREVARYLAT 142

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDT 169
                       + PG   R    L+ HL Q + E+D         +++C     PHS T
Sbjct: 143 PEPPPMGTMPTLAEPGSKAR----LLRHLDQCIAEID---------VEIC-----PHS-T 183

Query: 170 YSMPLTPASS 179
            +   +P+SS
Sbjct: 184 AAFAESPSSS 193


>gi|62008693|gb|AAX61088.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 74/121 (61%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CL  LK L V   Q + + + +++KA++LE  +  
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLXTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 68

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           ++K   +Q+   +P+   D F+ G+    +E+S+ +A TP + + +G  + +HLG     
Sbjct: 69  MRKQVVKQQAPVSPL-PXDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVXTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|195553770|ref|XP_002076744.1| GD24666 [Drosophila simulans]
 gi|194202734|gb|EDX16310.1| GD24666 [Drosophila simulans]
          Length = 149

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 8/100 (8%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           SR++QYR V KPM+E+KRR+RINRCL+ +K+L++     + E + K++ AD+LEL V HL
Sbjct: 20  SRSHQYRDVFKPMIEKKRRSRINRCLEYIKELLLEVSHLDAETMDKMDMADVLELAVHHL 79

Query: 86  QKMR-----RQQRLASNPVTDADRFRAGFTTCANEVSKCL 120
            K          R   +P+   D + +GF  C  EVS+ L
Sbjct: 80  SKKNCPVATPTSRQYQSPI---DCYWSGFRECILEVSQFL 116


>gi|301789591|ref|XP_002930213.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor HES-4-like
           [Ailuropoda melanoleuca]
          Length = 231

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  K ++E++RRARIN  L +LK L++ A + +    SKLEKADILE TV+HL    
Sbjct: 32  EHRKSSKSVMEKRRRARINESLSQLKTLILDAFRKDSSRHSKLEKADILENTVRHLGASP 91

Query: 90  RQQ---RLASNPVT-DAD-----RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           R++   RL   P    AD     ++RAGF  C  E ++ LA   G+   + ++L+ HL  
Sbjct: 92  RREPTARLLPPPAALSADPAVLGKYRAGFNECLAEXNRFLAGCEGVPADVRSRLLGHLAA 151

Query: 141 RLNEMD 146
            L ++ 
Sbjct: 152 FLGQLG 157


>gi|328708610|ref|XP_001945055.2| PREDICTED: transcription factor HES-1-A-like [Acyrthosiphon pisum]
          Length = 332

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 63/89 (70%), Gaps = 6/89 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           ++  KP++E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ
Sbjct: 73  KRANKPLMEKRRRARINQSLALLKTLILDSTRTENTKHSKLEKADILELTVRHLQ---RQ 129

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCL 120
           + L+S+     D++RAGF  CA EV++ L
Sbjct: 130 KVLSSDV---RDKYRAGFQECAREVTRFL 155


>gi|195345395|ref|XP_002039254.1| GM22831 [Drosophila sechellia]
 gi|194134480|gb|EDW55996.1| GM22831 [Drosophila sechellia]
          Length = 149

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 8/100 (8%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           SR++QYR V KPM+E+KRR+RINRCL+ +K+L++     + E + K++ AD+LEL V HL
Sbjct: 20  SRSHQYRDVFKPMIEKKRRSRINRCLEYIKELLLEVSHLDAETMDKMDMADVLELAVHHL 79

Query: 86  QKMR-----RQQRLASNPVTDADRFRAGFTTCANEVSKCL 120
            K          R   +P+   D + +GF  C  EVS+ L
Sbjct: 80  SKKNCPVATPTSREYQSPI---DCYWSGFRECILEVSQFL 116


>gi|321470452|gb|EFX81428.1| hypothetical protein DAPPUDRAFT_102551 [Daphnia pulex]
          Length = 364

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 20/119 (16%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVT--ALQAEGENVSKLEKADILELTVQ 83
           +R  + RKV KP++E+KRRARIN+ L++LKDL++   +++ EG   +KLEKAD+LELTV 
Sbjct: 17  ARGSESRKVRKPLMEKKRRARINQSLNDLKDLLMETDSVKKEGSRPTKLEKADVLELTVN 76

Query: 84  HLQKMRRQQR----------LASNPVTD--------ADRFRAGFTTCANEVSKCLASTP 124
           ++QK+ +++R            S P+ +        + RF+ GF  CA  V + L + P
Sbjct: 77  YVQKLHKERRNNMRDNSNDGSTSCPIPNGFSPKSNQSSRFKDGFIECARIVREVLHNQP 135


>gi|344282963|ref|XP_003413242.1| PREDICTED: transcription factor HES-2-like [Loxodonta africana]
          Length = 166

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 31/183 (16%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E    SKLEKADILE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINESLSQLKGLILPLLGRESSCYSKLEKADILEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
                A+   T +D +R G++ C   +S  L +   ++  +  +L+ HL           
Sbjct: 72  ASPCPAAA-PTPSDSYREGYSACLARLSLVLPACRVLEPAVSARLLEHL----------- 119

Query: 150 PLSVRVMDVCTPPPSPHSDTYSMPLT---PASSGSSQVDTCDYTSQYKMYESMPSPKSVW 206
               R     TP     +D+   PL    PAS G SQ              + P    +W
Sbjct: 120 ---WRTAAGATPDGGRAADSGCSPLQTRRPASPGPSQ-------------PAPPRGSGLW 163

Query: 207 RPW 209
           RPW
Sbjct: 164 RPW 166


>gi|311258364|ref|XP_003127577.1| PREDICTED: transcription factor HES-2-like [Sus scrofa]
          Length = 165

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 70/112 (62%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E  + SKLEKADILE+TV+ LQ++ 
Sbjct: 12  ELRKNLKPLLEKRRRARINASLSQLKGLILPLLGRESSHYSKLEKADILEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 + P T +D +R G+  C   +++ L +   ++  L  +L+ HL +R
Sbjct: 72  ASSCPTAAP-TSSDSYREGYRACLARLARVLPACRVLEPALSARLLEHLRRR 122


>gi|391329615|ref|XP_003739265.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif
           protein-like [Metaseiulus occidentalis]
          Length = 263

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 22/181 (12%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ--QRLAS 96
           +E++RR RIN CL+EL+ L+  A   E +  +KLEKA+IL++TV+HL+ +  +    LA+
Sbjct: 57  IEKRRRDRINNCLNELRRLVPAAF--EKQASAKLEKAEILQMTVEHLRGLEAKGLGALAN 114

Query: 97  NPVTDADRF-RAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMDKISPLSV 153
           +P   A  + R GF  CA EV++ L +  G+DL+  L  +L+SHL Q  +   + +PL  
Sbjct: 115 DPQKFAMEYHRVGFRECAAEVARYLVAVEGMDLQDPLRLRLLSHL-QCYSNQRETAPLPA 173

Query: 154 RVMDVCTPPPSPHS----DTYSMPLTPAS-------SGSSQVDTCDYTSQYKMYESMPSP 202
            V      P SP+S    ++ S+P  P +        G S   T   T+Q +   S P P
Sbjct: 174 VVPSAMKSPSSPNSWNPPESPSLPPHPPTCVQNDPMGGYSPYGT---TTQTRFLTSSPPP 230

Query: 203 K 203
           +
Sbjct: 231 Q 231


>gi|62007614|gb|AAX60605.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007616|gb|AAX60606.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007618|gb|AAX60607.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007620|gb|AAX60608.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007622|gb|AAX60609.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007624|gb|AAX60610.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007626|gb|AAX60611.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007628|gb|AAX60612.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007630|gb|AAX60613.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007632|gb|AAX60614.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007634|gb|AAX60615.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007636|gb|AAX60616.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007638|gb|AAX60617.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007640|gb|AAX60618.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007642|gb|AAX60619.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007644|gb|AAX60620.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007646|gb|AAX60621.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007648|gb|AAX60622.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007650|gb|AAX60623.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007652|gb|AAX60624.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007654|gb|AAX60625.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007656|gb|AAX60626.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007658|gb|AAX60627.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007660|gb|AAX60628.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007662|gb|AAX60629.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007664|gb|AAX60630.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007666|gb|AAX60631.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007668|gb|AAX60632.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007670|gb|AAX60633.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007672|gb|AAX60634.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007674|gb|AAX60635.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007676|gb|AAX60636.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007678|gb|AAX60637.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007680|gb|AAX60638.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007682|gb|AAX60639.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007684|gb|AAX60640.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007688|gb|AAX60642.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007690|gb|AAX60643.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007692|gb|AAX60644.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007694|gb|AAX60645.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007696|gb|AAX60646.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007698|gb|AAX60647.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007700|gb|AAX60648.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007702|gb|AAX60649.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007704|gb|AAX60650.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007706|gb|AAX60651.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007708|gb|AAX60652.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007710|gb|AAX60653.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007712|gb|AAX60654.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007714|gb|AAX60655.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007716|gb|AAX60656.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007718|gb|AAX60657.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007720|gb|AAX60658.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007722|gb|AAX60659.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007726|gb|AAX60661.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007728|gb|AAX60662.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007730|gb|AAX60663.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007732|gb|AAX60664.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007734|gb|AAX60665.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007736|gb|AAX60666.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007738|gb|AAX60667.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007740|gb|AAX60668.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007742|gb|AAX60669.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007744|gb|AAX60670.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007746|gb|AAX60671.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007748|gb|AAX60672.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007750|gb|AAX60673.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007752|gb|AAX60674.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007754|gb|AAX60675.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007756|gb|AAX60676.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007758|gb|AAX60677.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007760|gb|AAX60678.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007762|gb|AAX60679.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007764|gb|AAX60680.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007766|gb|AAX60681.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007768|gb|AAX60682.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007770|gb|AAX60683.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007772|gb|AAX60684.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007774|gb|AAX60685.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007778|gb|AAX60687.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007780|gb|AAX60688.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007782|gb|AAX60689.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007784|gb|AAX60690.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007786|gb|AAX60691.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007788|gb|AAX60692.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007790|gb|AAX60693.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007792|gb|AAX60694.1| enhancer of split m3 protein [Drosophila melanogaster]
 gi|62007794|gb|AAX60695.1| enhancer of split m3 protein [Drosophila melanogaster]
          Length = 49

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 42/45 (93%)

Query: 25 ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV 69
          +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE+V
Sbjct: 5  MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHV 49


>gi|397503161|ref|XP_003822200.1| PREDICTED: transcription factor HES-2 [Pan paniscus]
          Length = 173

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 9/116 (7%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  N SKLEKAD+LE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDA----DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                AS+  T A    D +R G++ C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  -----ASSWPTAASLPCDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRR 122


>gi|301607604|ref|XP_002933393.1| PREDICTED: transcription cofactor HES-6 [Xenopus (Silurana)
           tropicalis]
          Length = 187

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 32/196 (16%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R++ KP++E++RRARIN  L +L+ ++     ++ E  SK+E A++LELTV+ ++++ R 
Sbjct: 6   RQMRKPLVEKRRRARINESLQDLRGIL-----SDTEFQSKMENAEVLELTVKRVERILRN 60

Query: 92  QRLASNPV--TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
           +   ++ +    ++RF AG+  C +EV   ++S PGID  L  +L++HL + +     +S
Sbjct: 61  RTAEADRLQREASERFAAGYIQCMHEVHTFVSSCPGIDASLAAELLNHLLESM----PLS 116

Query: 150 PLSVR--VMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMY----------- 196
             S++  VMDV     S         L     GSS  D+C    + +             
Sbjct: 117 EGSLQDLVMDVLLDSTSSEEGCGLGVL-----GSSSEDSCSDMEESEGEKAGMGSVQDSG 171

Query: 197 ---ESMPSPKSVWRPW 209
              E  P   ++WRPW
Sbjct: 172 RTPEIQPPTPTMWRPW 187


>gi|312222680|ref|NP_001185934.1| transcription factor HES-2 isoform 1 [Bos taurus]
 gi|296479068|tpg|DAA21183.1| TPA: hairy and enhancer of split 2 [Bos taurus]
          Length = 165

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E    SKLEKADILE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINESLSQLKGLILPLLGRESSRYSKLEKADILEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 + P T +D +R G+  C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  ASSGPTAAP-TPSDSYREGYRACLARLARVLPTCRVLEPAVSARLLEHLRRR 122


>gi|194759392|ref|XP_001961933.1| GF14690 [Drosophila ananassae]
 gi|190615630|gb|EDV31154.1| GF14690 [Drosophila ananassae]
          Length = 510

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 36/165 (21%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I ++++T ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSTQNVTSSQDISK-----RTNKPLMEKRRRARINQSLAILKALILESTKSQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            EG+   +KLEKADILELTV+H Q+ R     + N      ++RAG+T CA EV++ LA 
Sbjct: 89  GEGQAKHTKLEKADILELTVRHFQRHRNLDDPSVN------KYRAGYTDCAREVARYLAT 142

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMD-KISPLSV 153
                       + PG   R    L+ HL Q + E+D +I P S 
Sbjct: 143 PEPPPMGTMPTLAEPGSKAR----LLRHLDQCIAEIDVEICPHST 183


>gi|390363848|ref|XP_787040.2| PREDICTED: uncharacterized protein LOC581970 [Strongylocentrotus
           purpuratus]
          Length = 404

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 8/123 (6%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV--SKLEKADILELTVQ 83
           SR+++ RK  KP++E++RRARIN CL EL+ ++  AL  E  +   +K EKADILE TV+
Sbjct: 15  SRSHEGRKSSKPLMEKRRRARINDCLTELQTIL-DALNPENNSTRQNKREKADILEQTVK 73

Query: 84  HLQKMRRQQRLASNPVTDAD---RFRAGFTTCANEVSKCLASTPG-IDLRLGTKLMSHLG 139
            L K  RQ  +  N   D +   +FR+GF  C   V++ L++  G ++      LMSHL 
Sbjct: 74  -LVKQLRQHGIRGNHPPDPNTQVQFRSGFNECMATVTQFLSANNGSLNGEAKAGLMSHLA 132

Query: 140 QRL 142
             L
Sbjct: 133 NSL 135


>gi|328707570|ref|XP_001944649.2| PREDICTED: hypothetical protein LOC100169375 [Acyrthosiphon pisum]
          Length = 418

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 13/142 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL+LTV HL+ +  +
Sbjct: 94  RKKRRGIIEKRRRDRINTSLSELRRLVPTAYEKQGS--AKLEKAEILQLTVDHLKMIHAK 151

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL----GQRL 142
               LA +P   A D    GF  CA EV++ L S  G++ R  L  +L+SHL     QR 
Sbjct: 152 GLDTLAYDPSKYAMDYHNIGFRECATEVARYLESVEGMNGRDPLRERLLSHLQYFAAQR- 210

Query: 143 NEMDKISPLSVRVMDVCTPPPS 164
            E    SP +    +   PPPS
Sbjct: 211 -EYAAKSPAAAGHHNAPPPPPS 231


>gi|348514778|ref|XP_003444917.1| PREDICTED: transcription factor HES-4-like [Oreochromis niloticus]
          Length = 228

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 11/191 (5%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M+  T  +E+++P +      KV KP++E+KRRARIN+CLD+LK L+ +   +      K
Sbjct: 1   MVATTDCVEKVKPTAGN----KVSKPLMEKKRRARINQCLDQLKCLLESYYSSSIRK-RK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILELTV+HL+ +++ Q  A++   D   +++GF +C   V++ L     ++    
Sbjct: 56  LEKADILELTVKHLKNLQKIQSCAASAF-DVSDYQSGFRSCLTNVNQYLLMADNLNAS-D 113

Query: 132 TKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTS 191
             ++S L  +L    + + +S   MD         S T    L+P++SG+ +  T   + 
Sbjct: 114 RWMLSQLSNKLCRSRRRAEIS-STMDSGLEQTDTQSGT--QKLSPSASGNEKRKTTG-SK 169

Query: 192 QYKMYESMPSP 202
             K++ +  SP
Sbjct: 170 TLKVHSASTSP 180


>gi|354491366|ref|XP_003507826.1| PREDICTED: transcription factor HES-1-like [Cricetulus griseus]
          Length = 171

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 60/83 (72%), Gaps = 4/83 (4%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           ++RK  KP++E++RRARIN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++
Sbjct: 33  EHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92

Query: 90  RQQ---RLASNPVTDADRFRAGF 109
           R Q    L+++P     ++RAGF
Sbjct: 93  RAQMTAALSTDPSV-LGKYRAGF 114


>gi|371455696|gb|AEX30641.1| hes6a [Anolis carolinensis]
          Length = 216

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 14/113 (12%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP++E+KRRARIN  L EL+ ++     A+ E  SK+E A++LELTV+ +Q +  Q
Sbjct: 11  RRARKPLVEKKRRARINESLQELRLIL-----ADTEFQSKMENAEVLELTVKRVQGILLQ 65

Query: 92  QRLASNPVTD------ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
            R   +P  D      ++RF AG+  C +EV   ++S PGID  +  +L++HL
Sbjct: 66  SR---SPDDDKLQREASERFAAGYIQCMHEVHTFVSSCPGIDSTIAAELLNHL 115


>gi|115495207|ref|NP_001069417.1| transcription cofactor HES-6 [Bos taurus]
 gi|109659367|gb|AAI18126.1| Hairy and enhancer of split 6 (Drosophila) [Bos taurus]
          Length = 225

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 38/208 (18%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----- 86
           RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q     
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQGALRG 80

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL + +   +
Sbjct: 81  RAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHLLESMPLRE 137

Query: 147 KISPLSVRVMDVCTPPPSPHSDTY------SMPL-TPASSGSSQVDTCDYTSQYKMYESM 199
             S   +    +  PP +P    +        PL +P  SG  Q    +   + ++  + 
Sbjct: 138 GSSFRDLLGDALSAPPAAPGRSNWLVGGALESPLPSPRGSGDDQSSDLEEVPEAELSRAP 197

Query: 200 PS------------------PKSVWRPW 209
           P+                   +SVWRPW
Sbjct: 198 PAEGTDSVPAALGSLTSARLAQSVWRPW 225


>gi|296488788|tpg|DAA30901.1| TPA: hairy and enhancer of split 6 [Bos taurus]
          Length = 225

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 38/208 (18%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----- 86
           RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q     
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQGALRG 80

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL + +   +
Sbjct: 81  RAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHLLESMPLRE 137

Query: 147 KISPLSVRVMDVCTPPPSPHSDTYSM------PL-TPASSGSSQVDTCDYTSQYKMYESM 199
             S   +    +  PP +P    + +      PL +P  SG  Q    +   + ++  + 
Sbjct: 138 GSSFRDLLGDALSAPPAAPGRSNWLVGGALESPLPSPRGSGDDQSSDLEEVPEAELSRAP 197

Query: 200 PS------------------PKSVWRPW 209
           P+                   +SVWRPW
Sbjct: 198 PAEGTDSVPAALGSLTSARLAQSVWRPW 225


>gi|62205208|gb|AAH92924.1| Her3 protein, partial [Danio rerio]
          Length = 253

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           +KV KP++E+KRRARIN+CL++LK L+ +A  +      KLEKADILELTV+HL+ ++  
Sbjct: 41  KKVSKPLMEKKRRARINKCLNQLKSLLESAC-SNNIRKRKLEKADILELTVKHLRHLQNT 99

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLAST 123
           +R  S    D+  + AG+ +C N VS  L ++
Sbjct: 100 KRGLSK-ACDSAEYHAGYRSCLNTVSHYLRAS 130


>gi|354505930|ref|XP_003515020.1| PREDICTED: transcription factor HES-2-like [Cricetulus griseus]
          Length = 157

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 7/115 (6%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN+ L +LK L++  L AE    SKLEKADILE+TV+ LQ   
Sbjct: 12  ELRKTLKPLLEKRRRARINQSLSQLKGLVLPLLGAETSRYSKLEKADILEMTVRFLQ--- 68

Query: 90  RQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
            +Q ++  P       D +  G+  C   +++ L +   ++  +  +L+ HL QR
Sbjct: 69  -EQPVSPYPTAAPEPLDSYLEGYRACLARLARMLPACSVLEPAVSVRLLEHLRQR 122


>gi|18858793|ref|NP_571155.1| hairy-related 3 [Danio rerio]
 gi|1279394|emb|CAA65996.1| HER-3 protein [Danio rerio]
 gi|156230127|gb|AAI52287.1| Hairy-related 3 [Danio rerio]
          Length = 229

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           +KV KP++E+KRRARIN+CL++LK L+ +A  +      KLEKADILELTV+HL+ ++  
Sbjct: 17  KKVSKPLMEKKRRARINKCLNQLKSLLESAC-SNNIRKRKLEKADILELTVKHLRHLQNT 75

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLAST 123
           +R  S    D+  + AG+ +C N VS  L ++
Sbjct: 76  KRGLSK-ACDSAEYHAGYRSCLNTVSHYLRAS 106


>gi|55715468|gb|AAV59258.1| basic helix-loop-helix transcription factor [Drosophila simulans]
          Length = 156

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 31/176 (17%)

Query: 45  ARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNPVT-DAD 103
           AR+N+CLD LK L V  L+ + + + +++KA++LE  V  +++ +  +++A    +   D
Sbjct: 1   ARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFMRQQKTPKKVAQEERSLPLD 58

Query: 104 RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG------QRLNEMDKISPLSVRVMD 157
            F+ G+    NEVS+ +ASTPG+ + LG  +M+HLG      Q+ +E    +      MD
Sbjct: 59  SFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKNLQQFHEAQSATDFLQNSMD 118

Query: 158 VCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSP----KSVWRPW 209
                    S     PL+PASSG      CD  +        PSP    + +WRPW
Sbjct: 119 C--------SSMDKAPLSPASSGYHS--DCDSPA--------PSPQPMQQPLWRPW 156


>gi|410929715|ref|XP_003978245.1| PREDICTED: transcription cofactor HES-6-like [Takifugu rubripes]
          Length = 207

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 35/200 (17%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E+KRRARIN+ L+EL+ L+     AE +  SKLE A++L +TV      +R 
Sbjct: 21  RKARKPLVEKKRRARINKSLEELRLLV-----AEPDLQSKLENAELLAMTV------KRV 69

Query: 92  QRLASNPVTDA--------DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           + +  +P  DA        +RF AG+  C ++V   +++ PG+D     +L+ HL + + 
Sbjct: 70  ENILQDPTPDAEASSREACERFTAGYIQCMHDVHTFVSTCPGVDQTFAAELLHHLMESMP 129

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESM---- 199
             D+     +       PP    S  +  P  P+SS     D  +  S+   + S+    
Sbjct: 130 LNDQERQRGIPDALSTRPPCGGGSAAWGSP-APSSSDHPYSDLDETESEQNHFSSLDEAE 188

Query: 200 ----------PSPKSVWRPW 209
                     PS K  WRPW
Sbjct: 189 SQDLSFFSGAPS-KPTWRPW 207


>gi|410899647|ref|XP_003963308.1| PREDICTED: transcription factor HES-1-A-like [Takifugu rubripes]
          Length = 221

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 9/123 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           +KV KP++E+KRRARIN+CLD+LK +++ +  +      KLEKADILELTV HL+ +++ 
Sbjct: 17  KKVSKPLMEKKRRARINKCLDQLK-ILLESYYSTSIRKRKLEKADILELTVNHLRNLQKH 75

Query: 92  Q--RLASNPVTDADRFRAGFTTCANEVSKCL---ASTPGIDLRLGTKLMSHLGQRLNEMD 146
           Q   +AS+  +D    ++GF  CA  V + L    S  GID  + ++L + L +     D
Sbjct: 76  QSCNIASSESSD---HQSGFRRCAANVDQFLLMADSVNGIDRWMLSQLSAKLWRPRGGED 132

Query: 147 KIS 149
            IS
Sbjct: 133 AIS 135


>gi|443717183|gb|ELU08377.1| hypothetical protein CAPTEDRAFT_66277, partial [Capitella teleta]
          Length = 105

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 68/106 (64%), Gaps = 1/106 (0%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           +++K ++E++RR RIN+CL+EL+ L++ A+  + +   K+EKADILE+ VQH++ +R   
Sbjct: 1   QLIKHLVEKRRRGRINQCLEELRCLVLEAMNKQVQQYEKMEKADILEMAVQHMRHVRHPT 60

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
              S P   +  F +GF  C +E++  L S P +D  +  +L++ L
Sbjct: 61  D-ESPPRDKSTHFDSGFRACVHEIAAFLDSYPNLDEGMKQRLLTQL 105


>gi|194863628|ref|XP_001970534.1| GG10686 [Drosophila erecta]
 gi|190662401|gb|EDV59593.1| GG10686 [Drosophila erecta]
          Length = 428

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 11/177 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 101 RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKSLQSK 158

Query: 92  Q--RLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMD 146
               L+ +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL Q   +  
Sbjct: 159 SLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRLRLMSHL-QYFVQQR 217

Query: 147 KISPLSVRVMDVCTPPPSPHSDTY--SMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           ++S  S       T P +P S  Y  +    P  S ++  +   Y S Y    + PS
Sbjct: 218 ELSAKSCASPGGWT-PAAPSSSGYQPNCAAAPYQSYAAPANPGAYVSSYPTLSASPS 273


>gi|195474568|ref|XP_002089563.1| GE23399 [Drosophila yakuba]
 gi|194175664|gb|EDW89275.1| GE23399 [Drosophila yakuba]
          Length = 430

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 11/177 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 101 RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKSLQSK 158

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMD 146
               L+ +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL Q   +  
Sbjct: 159 TLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRLRLMSHL-QYFVQQR 217

Query: 147 KISPLSVRVMDVCTPPPSPHSDTY--SMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           ++S  S       T P +P S  Y  +    P  S ++  +   Y S Y    + PS
Sbjct: 218 ELSAKSCASPGGWT-PAAPSSSGYQPNCAAAPYQSYAAPANPGAYVSSYPTLSASPS 273


>gi|195030158|ref|XP_001987935.1| GH10835 [Drosophila grimshawi]
 gi|193903935|gb|EDW02802.1| GH10835 [Drosophila grimshawi]
          Length = 523

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 49/192 (25%)

Query: 10  INMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV------TALQ 63
           I +++++ ++   Q IS+     +  KP++E++RRARIN+ L  LK L++       A  
Sbjct: 34  IGLVSSSQNVTSSQEISK-----RTNKPLMEKRRRARINQSLAILKALILESTKHQNAKN 88

Query: 64  AEGE-NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA- 121
            +G+   +KLEKADILELTV+H Q+ R       +P    +++R+G+T CA EV++ LA 
Sbjct: 89  GDGQAKHTKLEKADILELTVRHFQRHRN----LDDPTV--NKYRSGYTDCAREVARYLAT 142

Query: 122 ------------STPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDT 169
                       S PG   R    L+ HL Q + E+D         +++C     PH+ T
Sbjct: 143 PEPPPMGNMPTLSEPGSKAR----LLRHLDQCIAEID---------VEIC-----PHTTT 184

Query: 170 YSMPLTPASSGS 181
            +   +P +S +
Sbjct: 185 SNFAESPNNSST 196


>gi|335303577|ref|XP_003359740.1| PREDICTED: transcription cofactor HES-6-like [Sus scrofa]
          Length = 224

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 43/210 (20%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----- 86
           RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q     
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQGALRG 80

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
           + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL   L  M 
Sbjct: 81  RAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHL---LESMP 134

Query: 147 KISPLSVR--VMDVCTPPPSPHSDT---YSMPL-----TPASSGSSQVDTCDYTSQYKMY 196
                S R  + D  + PP  H  +      PL     +P  SG  Q    +   + ++ 
Sbjct: 135 LRESSSFRDLLGDALSGPPGVHGRSNWPVGGPLGSPLPSPRGSGDDQSSDLEEAPEAELS 194

Query: 197 ES-MPSPK----------------SVWRPW 209
            + +  P+                SVWRPW
Sbjct: 195 RATVEGPELVPVALGSLTAAHMAHSVWRPW 224


>gi|62007724|gb|AAX60660.1| enhancer of split m3 protein [Drosophila melanogaster]
          Length = 47

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 40/43 (93%)

Query: 25 ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGE 67
          +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EGE
Sbjct: 5  MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGE 47


>gi|126329526|ref|XP_001377214.1| PREDICTED: transcription factor HES-2-like [Monodelphis domestica]
          Length = 172

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 25/183 (13%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP++E++RRARIN  L +LK L++  +  +    SKLEKADILE+TV+ LQ+++
Sbjct: 12  ELRKTLKPLMEKRRRARINESLSQLKGLILPLIGKDSSRYSKLEKADILEMTVRFLQELQ 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
                A+  +  A+ +R G+  C + +++ L +   +D  +  +L+ HL +  +    + 
Sbjct: 72  TSHCYAAPNL--AESYREGYRACLSRLTRLLPTCSLLDGDVCRRLLEHLHRSASGQYPLG 129

Query: 150 -PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ--YKMYESMPSPKSVW 206
            P S R                     P  SGS   D     S          P P  +W
Sbjct: 130 FPDSRR--------------------NPKDSGSESPDGMRLASSPPGSACPPGPPPSGLW 169

Query: 207 RPW 209
           RPW
Sbjct: 170 RPW 172


>gi|345309916|ref|XP_001518093.2| PREDICTED: COP9 signalosome complex subunit 7a-like
           [Ornithorhynchus anatinus]
          Length = 413

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 10/114 (8%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTA--LQAEGENVSKLEKADILELTVQHLQKMRR 90
           + +KP++E++RRARIN  LD+LK L+  A   +      S+LEKADILE+TVQHLQ++ R
Sbjct: 212 EAVKPLVEKRRRARINASLDQLKRLLAQAPVGRQSARAASRLEKADILEMTVQHLQRLHR 271

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
            ++      ++   F AG+  C   VS  L S  G  L  G  L +HL QRL +
Sbjct: 272 GEK-----PSEGRDFEAGYRHCLEAVSSFLHSA-GPSLHPG--LHAHLLQRLRQ 317


>gi|348544197|ref|XP_003459568.1| PREDICTED: transcription cofactor HES-6-like [Oreochromis
           niloticus]
          Length = 324

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 9/110 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ---KM 88
           RK  KP++E+KRRARIN  L EL+ L+     A+ +  SK+E A++LELTV+ ++   K 
Sbjct: 108 RKTRKPLVEKKRRARINESLQELRTLL-----ADTDFHSKMENAEVLELTVKKVEDILKN 162

Query: 89  RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           R+Q+    N   + +RF AG+  C +EV   ++S PGID  +  +L++HL
Sbjct: 163 RKQEAETLNREAN-ERFAAGYIQCMHEVHMFVSSCPGIDATVAAELLNHL 211


>gi|348571445|ref|XP_003471506.1| PREDICTED: transcription factor HES-2-like [Cavia porcellus]
          Length = 160

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E    SKLEKADILE+TV  LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINDSLGQLKGLILPLLGRENSRYSKLEKADILEMTVHFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                A  P    D +R G+  C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  AFSYPAIAP-PPTDSYREGYRACVARLARVLPACGVLEPAVSARLLEHLRRR 122


>gi|195121522|ref|XP_002005269.1| GI19174 [Drosophila mojavensis]
 gi|193910337|gb|EDW09204.1| GI19174 [Drosophila mojavensis]
          Length = 407

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 79/127 (62%), Gaps = 8/127 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 97  RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKNLQSK 154

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMD 146
               L+ +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL Q   +  
Sbjct: 155 TLDSLSYDPQRVAMDYHTIGFRECAAEVARYLVTIEGMDIQDPLRLRLMSHL-QYFAQQR 213

Query: 147 KISPLSV 153
           +IS ++ 
Sbjct: 214 EISGVAA 220


>gi|170062823|ref|XP_001866836.1| transcription factor HES-1 [Culex quinquefasciatus]
 gi|167880601|gb|EDS43984.1| transcription factor HES-1 [Culex quinquefasciatus]
          Length = 606

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 20/129 (15%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLM----VTALQAEGENV-SKLEKADILELTVQHLQ 86
           ++  KP++E++RRARIN+ L  LK L+    V     +G++  SKLEKADILELTV+H Q
Sbjct: 41  KRTNKPLMEKRRRARINQSLAILKALILESTVKTKAGDGQSKHSKLEKADILELTVRHFQ 100

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPG---------IDLRLGTKLMSH 137
           + R       NP    D++RAG+T CA EV++ LA+             D     +L+ H
Sbjct: 101 RHRN----LDNPAI--DKYRAGYTDCAREVARYLATPEPPPLPSVPTLTDAGSKARLLRH 154

Query: 138 LGQRLNEMD 146
           L   + E+D
Sbjct: 155 LDNCIAEID 163


>gi|195581414|ref|XP_002080529.1| GD10200 [Drosophila simulans]
 gi|194192538|gb|EDX06114.1| GD10200 [Drosophila simulans]
          Length = 422

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 11/177 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 101 RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKTLQSK 158

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMD 146
               L+ +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL Q   +  
Sbjct: 159 TLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRVRLMSHL-QYFVQQR 217

Query: 147 KISPLSVRVMDVCTPPPSPHSDTY--SMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           ++S  S       + P +P S  Y  +    P  S ++  +   Y S Y    + PS
Sbjct: 218 ELSAKSCASPGGWS-PAAPSSSGYQPNCAAAPYQSYAAPTNPGAYVSSYPTLSASPS 273


>gi|291464136|gb|ADE05597.1| hairy [Rhodnius prolixus]
          Length = 91

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 65/92 (70%), Gaps = 8/92 (8%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQR---LA 95
           +E++RRARIN CL+ELK L++ AL+ +    SKLEKADILE+TV+H++ ++R Q     A
Sbjct: 1   MEKRRRARINNCLNELKSLILDALKKDPARHSKLEKADILEMTVKHVESLQRHQAALTAA 60

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLASTPGID 127
           ++P T  ++F+AG++ C  E+ +     PG++
Sbjct: 61  ADP-TVINKFKAGWSECITEIGR----FPGLE 87


>gi|195383330|ref|XP_002050379.1| GJ20236 [Drosophila virilis]
 gi|194145176|gb|EDW61572.1| GJ20236 [Drosophila virilis]
          Length = 389

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 98/179 (54%), Gaps = 16/179 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 91  RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKNLQSK 148

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMD 146
               L+ +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL Q   +  
Sbjct: 149 TLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRLRLMSHL-QYFAQQR 207

Query: 147 KISPLSVRVMDVCTPPP---SPHSDTYSMPLTPASS-GSSQVDTCDYTSQYKMYESMPS 201
           +IS  S      C   P      + +YS P T A   G S V +   TS     E++P+
Sbjct: 208 EIS-ASGGYQPSCAAAPYQSYATASSYSAPSTGAYHVGRSSVSS---TSGAGASETLPA 262


>gi|156388067|ref|XP_001634523.1| predicted protein [Nematostella vectensis]
 gi|156221607|gb|EDO42460.1| predicted protein [Nematostella vectensis]
          Length = 92

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 6/92 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RINRCL EL+ L+ TAL+ EG   SKLEKA+IL LTV+HL+ +R  
Sbjct: 2   RKRRRGLIEKKRRDRINRCLVELRRLVPTALEKEGS--SKLEKAEILHLTVEHLKWLRST 59

Query: 92  QRLASNPVTDADRFR-AGFTTCANEVSKCLAS 122
              + + VTD   +R AGF  C  EV+K +A+
Sbjct: 60  SGQSRSDVTD---YRAAGFQECLTEVAKYMAT 88


>gi|62008493|gb|AAX60988.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 129

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 3/121 (2%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE     
Sbjct: 11  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLE-AAXX 67

Query: 85  LQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
                             D F+ G+    +E+S+ +A TP + + +G  +M+HLG     
Sbjct: 68  XXXXXXXXXXXXXXXXXXDSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQR 127

Query: 145 M 145
           M
Sbjct: 128 M 128


>gi|195332321|ref|XP_002032847.1| GM20733 [Drosophila sechellia]
 gi|194124817|gb|EDW46860.1| GM20733 [Drosophila sechellia]
          Length = 320

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 11/177 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 3   RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKTLQSK 60

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMD 146
               L+ +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL Q   +  
Sbjct: 61  TLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRLRLMSHL-QYFVQQR 119

Query: 147 KISPLSVRVMDVCTPPPSPHSDTY--SMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           ++S  S       + P +P S  Y  +    P  S ++  +   Y S Y    + PS
Sbjct: 120 ELSAKSCASPGGWS-PAAPSSSGYQPNCAAAPYQSYAAPANPGAYVSSYPTLSASPS 175


>gi|17647503|ref|NP_523657.1| Hairy/E(spl)-related with YRPW motif [Drosophila melanogaster]
 gi|122102848|sp|Q7KM13.1|HEY_DROME RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein
 gi|5678825|gb|AAD46771.1|AF151523_1 hairy and enhancer of split related protein 1 [Drosophila
           melanogaster]
 gi|21627753|gb|AAF59152.2| Hairy/E(spl)-related with YRPW motif [Drosophila melanogaster]
          Length = 425

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 11/177 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 101 RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKSLQSK 158

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMD 146
               L+ +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL Q   +  
Sbjct: 159 TLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRLRLMSHL-QYFVQQR 217

Query: 147 KISPLSVRVMDVCTPPPSPHSDTY--SMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           ++S  S       + P +P S  Y  +    P  S ++  +   Y S Y    + PS
Sbjct: 218 ELSAKSCASPGGWS-PAAPSSSGYQPNCAAAPYQSYAAPANPGAYVSSYPTLSASPS 273


>gi|115646541|gb|ABJ17078.1| RT01017p [Drosophila melanogaster]
          Length = 423

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 11/177 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 101 RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKSLQSK 158

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMD 146
               L+ +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL Q   +  
Sbjct: 159 TLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRLRLMSHL-QYFVQQR 217

Query: 147 KISPLSVRVMDVCTPPPSPHSDTY--SMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           ++S  S       + P +P S  Y  +    P  S ++  +   Y S Y    + PS
Sbjct: 218 ELSAKSCASPGGWS-PAAPSSSGYQPNCAAAPYQSYAAPANPGAYVSSYPTLSASPS 273


>gi|312385090|gb|EFR29669.1| hypothetical protein AND_01183 [Anopheles darlingi]
          Length = 478

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 67/103 (65%), Gaps = 4/103 (3%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ---RLA 95
           +E+KRRARIN  L++LK L++ A++ +    SKLEKADIL+LTV+HLQ + R++    +A
Sbjct: 1   MEKKRRARINHYLNDLKGLLLDAMKKDPVRHSKLEKADILDLTVKHLQDIERRRLSVAMA 60

Query: 96  SNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
            +P    ++F +G+  C +E+SK   S   +D  L  ++  HL
Sbjct: 61  VDPSV-PEKFASGYRECIDEISKYFDSLGTVDEGLKGRVRKHL 102


>gi|242018829|ref|XP_002429873.1| transcription factor hey, putative [Pediculus humanus corporis]
 gi|212514907|gb|EEB17135.1| transcription factor hey, putative [Pediculus humanus corporis]
          Length = 345

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +  +
Sbjct: 80  RKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKNLHAK 137

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
               LA +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL
Sbjct: 138 GLDALAYDPHKFAMDYHSIGFRECAAEVARYLVTVEGMDIQDPLRLRLMSHL 189


>gi|195150599|ref|XP_002016238.1| GL10603 [Drosophila persimilis]
 gi|194110085|gb|EDW32128.1| GL10603 [Drosophila persimilis]
          Length = 441

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 7/125 (5%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           I   QP S     RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL
Sbjct: 72  ISPSQPGSCQLMSRKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEIL 129

Query: 79  ELTVQHLQKMRRQ--QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTK 133
           +LTV+HL+ ++ +    L+ +P   A D    GF  CA EV++ L +  G+D++  L  +
Sbjct: 130 QLTVEHLKNLQSKTLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRLR 189

Query: 134 LMSHL 138
           LMSHL
Sbjct: 190 LMSHL 194


>gi|198457405|ref|XP_001360658.2| GA10830 [Drosophila pseudoobscura pseudoobscura]
 gi|198135964|gb|EAL25233.2| GA10830 [Drosophila pseudoobscura pseudoobscura]
          Length = 442

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 7/125 (5%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           I   QP S     RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL
Sbjct: 72  ISPSQPGSCQLMSRKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEIL 129

Query: 79  ELTVQHLQKMRRQ--QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTK 133
           +LTV+HL+ ++ +    L+ +P   A D    GF  CA EV++ L +  G+D++  L  +
Sbjct: 130 QLTVEHLKNLQSKTLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDPLRLR 189

Query: 134 LMSHL 138
           LMSHL
Sbjct: 190 LMSHL 194


>gi|443717182|gb|ELU08376.1| hypothetical protein CAPTEDRAFT_163301 [Capitella teleta]
          Length = 218

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 31/205 (15%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK++K ++E+KRR RIN+CLD+LK L++  L  + +   K+EKADILE+TV++L++ +++
Sbjct: 18  RKLIKHIVEKKRRGRINQCLDDLKCLVLDELHRKPDQYEKMEKADILEMTVRYLRQRKQK 77

Query: 92  QRLASNPV-------TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
               ++PV       T A +F  G+ +C  E++  L     +   L T+L    G  L  
Sbjct: 78  LGKMTSPVSGVVESETQAQQFYNGYRSCVAEINSILDRQEALPEDLKTRLR---GSLLRA 134

Query: 145 MDKISPLSVRVMDVCTPP----PSPHSD--------TYSMP-------LTPASSGSSQVD 185
            +++S  + +      PP    PS   D        T  MP       +TP  +  S   
Sbjct: 135 SERLSGGATQRQLPTAPPRYDHPSATMDIKCTLSVATPVMPRVFSAKVVTPQETSPSHSP 194

Query: 186 TCDYTSQYKMYESMPSPKS-VWRPW 209
           +  +     +  S+ SP+S +WRPW
Sbjct: 195 S-GFIHPSSLSFSLNSPRSPMWRPW 218


>gi|62955773|ref|NP_001017901.1| hairy-related 13 [Danio rerio]
 gi|62202349|gb|AAH92944.1| Hairy-related 13 [Danio rerio]
 gi|182890422|gb|AAI64322.1| Her13 protein [Danio rerio]
          Length = 224

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 70/110 (63%), Gaps = 9/110 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTA-LQAEGENVSKLEKADILELTVQHLQKMRR 90
           RK  KP++E+KRRARIN  L +L+ L+    LQ      +K+E A++LELTV+ ++ + +
Sbjct: 25  RKTRKPIVEKKRRARINESLQDLRTLLTNNDLQ------TKMENAEVLELTVKRVESILQ 78

Query: 91  QQRLASNPVTD--ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
            +   +  VT   ++RF AG+  C +EV   +++ PGI+ R+  +L++HL
Sbjct: 79  SRSQETGTVTQEASERFAAGYIQCMHEVHTFVSTCPGIEARVAAELLNHL 128


>gi|240848957|ref|NP_001155821.1| hairy E protein-like [Acyrthosiphon pisum]
 gi|239789596|dbj|BAH71413.1| ACYPI009911 [Acyrthosiphon pisum]
          Length = 228

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 76/120 (63%), Gaps = 9/120 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGEN---VSKLEKADILELTVQHLQKM 88
           RK+ KP++E+KRRARIN+ LDELK ++V A +  G++   V+KLEKADILE+TV++L K 
Sbjct: 39  RKIRKPLMEKKRRARINQSLDELKRIVVDAEKFAGQDLSRVNKLEKADILEMTVRYL-KR 97

Query: 89  RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRL--GTKLMSHL---GQRLN 143
           +    + S P    + + AG+  C  +V + LA     + RL  G +++ HL    +RLN
Sbjct: 98  KSTASVPSPPPPGPEVYAAGYRRCIGQVQELLAEQWTDERRLMSGQRMIEHLESCARRLN 157


>gi|241735218|ref|XP_002412333.1| transcription factor hey, putative [Ixodes scapularis]
 gi|215505589|gb|EEC15083.1| transcription factor hey, putative [Ixodes scapularis]
          Length = 268

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 10/156 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +  +
Sbjct: 21  RKKRRGIIEKRRRDRINNSLTELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLHSK 78

Query: 92  -QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMDK 147
                 +P   A D    GF  CA+EV++ L +  GIDL+  L  +LMSHL     + + 
Sbjct: 79  VDAFTFDPHKFAMDYHTMGFRECASEVARYLVAIEGIDLQDPLRLRLMSHLQCYTAQRE- 137

Query: 148 ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQ 183
              L+ +     +P  +P S   + P  PA S S Q
Sbjct: 138 ---LAAKTATSWSPNATPSSQYPTAPSLPAVSLSPQ 170


>gi|157128163|ref|XP_001661336.1| transcription factor HES-1 (Hairy and enhancer of split 1),
           putative [Aedes aegypti]
 gi|108872685|gb|EAT36910.1| AAEL011056-PA, partial [Aedes aegypti]
          Length = 355

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 20/129 (15%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLM----VTALQAEGENV-SKLEKADILELTVQHLQ 86
           ++  KP++E++RRARIN+ L  LK L+    V     +G+   SKLEKADILELTV+H Q
Sbjct: 48  KRTNKPLMEKRRRARINQSLAILKALILESTVKTKSGDGQTKHSKLEKADILELTVRHFQ 107

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPG---------IDLRLGTKLMSH 137
           + R       NP    D++RAG+T CA EV++ LA+             D     +L+ H
Sbjct: 108 RHRN----LDNPAI--DKYRAGYTDCAREVARYLATPEPPPLPSVPTLTDAGSKARLLRH 161

Query: 138 LGQRLNEMD 146
           L   + E+D
Sbjct: 162 LDNCIAEID 170


>gi|432864671|ref|XP_004070402.1| PREDICTED: transcription factor HES-2-like [Oryzias latipes]
          Length = 201

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 27/191 (14%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L+ LK L++  +  +    SKLEKADILE+TV+ L+   
Sbjct: 27  ELRKTLKPLLEKRRRARINDSLNHLKSLILPLVGKDNARYSKLEKADILEMTVRFLRD-- 84

Query: 90  RQQRLASNPVTD-ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
               L S+PV D A+ +R G+  C + VS  L  T  +D     K+   + Q        
Sbjct: 85  ----LPSSPVKDSAESYREGYKACLHRVSALLPKT-SLDEDACQKVQDFIKQ-------- 131

Query: 149 SPLSVRVMDVCT--------PPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMP 200
             ++  VM  C           P  H    S+    +S   SQ  +    +  +  +S  
Sbjct: 132 -SMTANVMPTCLNCCAQSSRAFPQIHQRLQSLKSNFSSRLDSQSRSNGAATPNRAQQSGA 190

Query: 201 SPKS--VWRPW 209
            P S  +WRPW
Sbjct: 191 QPVSAAMWRPW 201


>gi|363895264|gb|AEW42993.1| Hes1 [Nematostella vectensis]
          Length = 279

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 5/94 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR- 90
           RK  + ++E+KRR RINRCL EL+ L+ TAL+ EG   SKLEKA+IL LTV+HL+ +R  
Sbjct: 28  RKRRRGLIEKKRRDRINRCLVELRRLVPTALEKEGS--SKLEKAEILHLTVEHLKWLRST 85

Query: 91  --QQRLASNPVTDADRFRAGFTTCANEVSKCLAS 122
             Q R      +  D   AGF  C  EV+K +A+
Sbjct: 86  SGQSRTVCTEQSVTDYRAAGFQECLTEVAKYMAT 119


>gi|395840875|ref|XP_003793277.1| PREDICTED: transcription factor HES-2 [Otolemur garnettii]
          Length = 165

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 70/113 (61%), Gaps = 1/113 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +L+ L++  L  E    SKLEKADILE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINESLSQLRGLILPLLGRENSRYSKLEKADILEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
                A+ P   +D +R G++ C   ++  L +   ++  +  +L+ HL +R+
Sbjct: 72  ASSCPAAAP-GPSDSYRDGYSACVARLACVLPACQVLEPAVSERLLEHLRRRV 123


>gi|334324884|ref|XP_001374040.2| PREDICTED: hypothetical protein LOC100022076 [Monodelphis
           domestica]
          Length = 539

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 70/109 (64%), Gaps = 7/109 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E+KRRARIN  L EL+ ++     A+ E   K+E A++LELTV+ +Q + + 
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLIL-----ADAEFQMKMENAEVLELTVKRVQGVLQS 80

Query: 92  QRLASNPV--TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           + L S+ +    ++RF AG+  C +EV   +++ PGID  +  +L++HL
Sbjct: 81  RSLESDKLHREASERFVAGYIQCMHEVHMFVSTCPGIDAAIAAELLNHL 129


>gi|157118599|ref|XP_001659171.1| transcription factor Hairy, putative [Aedes aegypti]
 gi|108883233|gb|EAT47458.1| AAEL001428-PA [Aedes aegypti]
          Length = 298

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 18/155 (11%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV HL+++   
Sbjct: 20  RKRRRGVIEKKRRDRINSSLSELKRLVPSAYEKQGS--AKLEKAEILQLTVDHLKQL--H 75

Query: 92  QRLASNPVTDADRFR-----AGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
            R   +   D  RF       GF  C  EV++ L S  G+D++  L  +LMSHL   L +
Sbjct: 76  ARGLDDASYDPQRFAMDYHIIGFRECVAEVARYLVSIEGMDVQDPLRLRLMSHLQCFLTQ 135

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASS 179
            +  S  +         P   HS +Y     P SS
Sbjct: 136 RELSSKANAS-------PAWSHSSSYQSAYAPHSS 163


>gi|62007776|gb|AAX60686.1| enhancer of split m3 protein [Drosophila melanogaster]
          Length = 46

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 39/42 (92%)

Query: 25 ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEG 66
          +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV  LQ EG
Sbjct: 5  MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEG 46


>gi|195430110|ref|XP_002063100.1| GK21562 [Drosophila willistoni]
 gi|194159185|gb|EDW74086.1| GK21562 [Drosophila willistoni]
          Length = 415

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 71/112 (63%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 90  RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKSLQSK 147

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
               L  +P   A D    GF  CA EV++ L +  G+D++  L  +LMSHL
Sbjct: 148 TLDSLNYDPQRVAMDYHTIGFRECAAEVARYLVTIEGMDIQDPLRLRLMSHL 199


>gi|209733758|gb|ACI67748.1| Transcription cofactor HES-6 [Salmo salar]
          Length = 236

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 11/110 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELT---VQHLQKM 88
           RK  KP++E+KRRARIN  L EL+ L+        +  SK+E A++LE+T   V+H+ K 
Sbjct: 27  RKARKPLVEKKRRARINESLQELRTLL-------ADTDSKVENAEVLEMTVKKVEHILKD 79

Query: 89  RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           R Q+    N    ++RF AG+  C +EV   +++ PGID  +  +L++HL
Sbjct: 80  RPQETDIMNREA-SERFAAGYIQCMHEVHMFVSNCPGIDATVAAELLNHL 128


>gi|431906382|gb|ELK10579.1| Transcription factor HES-2 [Pteropus alecto]
          Length = 165

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 7/115 (6%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E    SKLEKADILE+TV+ LQ   
Sbjct: 12  ELRKSLKPLLEKRRRARINESLKQLKGLILPLLGRESSRYSKLEKADILEMTVRFLQ--- 68

Query: 90  RQQRLASNP---VTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
             Q  +S P    T  D +R G+  C   +++ L +   ++  +  +L+ HL +R
Sbjct: 69  -DQPASSCPRAAPTPPDSYREGYRACLERLTRVLPACRVLEPAVSARLLEHLRRR 122


>gi|194757511|ref|XP_001961008.1| GF11221 [Drosophila ananassae]
 gi|190622306|gb|EDV37830.1| GF11221 [Drosophila ananassae]
          Length = 418

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 95  RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKNLQSK 152

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
               L+ +P   A D    GF  CA EV++ L +  G++++  L  +LMSHL
Sbjct: 153 TLDSLSYDPQRVAMDYHSIGFRECAAEVARYLVTIEGMEIQDPLRLRLMSHL 204


>gi|345484850|ref|XP_001601600.2| PREDICTED: protein hairy-like [Nasonia vitripennis]
          Length = 383

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 27/149 (18%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNP 98
           +E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ+ LA   
Sbjct: 1   MEKRRRARINQSLAALKALILDSARLENTKHSKLEKADILELTVRHLQ---RQRSLAQPG 57

Query: 99  VTDADRFRAGFTTCANEVSKCL-------ASTPGIDLRLGTKLMSHLGQRLNEMD----- 146
           ++   R++AG+  C+ EVS+ L        +T  ++     +L+ HL   ++E+D     
Sbjct: 58  LS---RYKAGYQDCSREVSRYLDAPDIITGNTTPLEPAFKQRLLRHLDSCVSELDLDLGS 114

Query: 147 ------KISPLSV--RVMDVCTPPP-SPH 166
                   SP SV  RV+   +P P  PH
Sbjct: 115 RPDSGLGSSPGSVTDRVLGPASPGPLDPH 143


>gi|47220424|emb|CAG03204.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 200

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 26/190 (13%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L  LK L+V          SKLEKADILE+TV+ L+   
Sbjct: 27  ELRKTLKPLLEKRRRARINDSLTHLKSLIVPLAGKGNARYSKLEKADILEMTVRFLRD-- 84

Query: 90  RQQRLASNPVTD-ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
               L S PV D AD +R G+  C   VS  L           T L     QR+N+  + 
Sbjct: 85  ----LPSTPVKDPADSYREGYRACLQRVSALLPQ---------TSLGQDACQRVNDFVQQ 131

Query: 149 SPLSVRVMDVCTPPPSPHSDTY-----SMPLTPASSGSSQVDTCDYTSQYKMYESMPSPK 203
           S +S  V   C    +  S ++      + +  +S GS   +    +       + P P+
Sbjct: 132 S-MSSAVTPTCLNCCAQSSRSFPQIQQRLQILKSSLGSRLENQPRSSGAVAPGGAQPGPQ 190

Query: 204 ----SVWRPW 209
               ++WRPW
Sbjct: 191 AAHAAMWRPW 200


>gi|348514772|ref|XP_003444914.1| PREDICTED: transcription factor HES-2-like [Oreochromis niloticus]
          Length = 199

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 7/92 (7%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L+ LK L++  +  +    SKLEKAD+LE+TV+ L+   
Sbjct: 27  ELRKTLKPLLEKRRRARINDSLNHLKSLILPLVGKDNARYSKLEKADVLEMTVRFLRD-- 84

Query: 90  RQQRLASNPVTD-ADRFRAGFTTCANEVSKCL 120
               L S PV D AD +R G+  C   VS  L
Sbjct: 85  ----LPSTPVKDSADSYREGYKACLQRVSALL 112


>gi|301608638|ref|XP_002933888.1| PREDICTED: transcription factor HES-3-like [Xenopus (Silurana)
           tropicalis]
          Length = 207

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 7/91 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV--SKLEKADILELTVQHLQKMR 89
           RKV KP++E+KRRARIN  L++LK L+    +   +N+   KLEKADILELTV++L+ + 
Sbjct: 17  RKVSKPLMEKKRRARINVSLEQLKGLLE---KNYSQNIRKRKLEKADILELTVKYLKTL- 72

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCL 120
            Q  +  NP+  +  ++AGF  C N V++ L
Sbjct: 73  -QNSIQGNPLYRSTEYQAGFRNCLNGVNQFL 102


>gi|157278357|ref|NP_001098281.1| Her13.1 [Oryzias latipes]
 gi|66393598|gb|AAY45948.1| Her13.1 [Oryzias latipes]
          Length = 209

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 42/208 (20%)

Query: 32  RKVM---KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
           RK+M   KP++E++RRARIN  L EL+ L+     A+ +  +K+E A++LE+TV  ++ +
Sbjct: 14  RKIMMMRKPLVEKRRRARINDSLHELRLLV-----ADADLHAKMENAEVLEVTVNRVESV 68

Query: 89  --RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
              R Q + +      +RF AG+  C ++V   ++S PGID  L  +L++HL + L    
Sbjct: 69  MQNRDQDVDAVNREACERFAAGYIQCMHDVHTFMSSCPGIDQELSAELLNHLLESL---- 124

Query: 147 KISPLSVR--VMDVCTPPP------SPHSDTYSMPLTP---ASSG---SSQVDTCDY--- 189
              PL+ +  V D  +  P      +PH       ++P   ASS    SS +D  D    
Sbjct: 125 ---PLNEQNLVPDAASHHPGRNSTYAPHDRLQMAGVSPSPFASSTDDLSSDLDETDSEHS 181

Query: 190 --TSQYKMYESMPSPKSV------WRPW 209
             ++  +  ES  +P  V      WRPW
Sbjct: 182 QRSNSEEGRESHGTPHGVHFSKVLWRPW 209


>gi|312081966|ref|XP_003143248.1| hypothetical protein LOAG_07668 [Loa loa]
          Length = 190

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 8/117 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           +K  KP++ERKRRARIN+CL E++ ++V   +    N SK EKADILE++V ++++++R 
Sbjct: 19  KKANKPLMERKRRARINKCLLEMRQMLVDDNRNGSPNYSKWEKADILEMSVDYIRQLKR- 77

Query: 92  QRLASNPVTDA----DRFRAGFTTCANEVSK-CLASTPGIDLR-LGTKLMSHLGQRL 142
            R+A N           F  GF+ C  E+    L      D+R   ++L SHL  RL
Sbjct: 78  -RIAVNSKAKQPFSLPYFVDGFSNCVREMQNYTLLEKWSADMREYNSRLTSHLTARL 133


>gi|432866074|ref|XP_004070685.1| PREDICTED: transcription factor HES-3-like [Oryzias latipes]
          Length = 228

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 44/217 (20%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           KV KP++E+KRRARIN+CLDELK L+     +      KLEKADILELTV+HL+ +++ Q
Sbjct: 16  KVSKPLMEKKRRARINQCLDELKFLLENYYSSSIRK-RKLEKADILELTVKHLRNLQKIQ 74

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL---------- 142
             A    +D   ++ G+ +C   V++ L  TP    R G  ++S L  +L          
Sbjct: 75  SCAV--ASDCPEYQTGYRSCLANVNQFLI-TPDNMNRSGRWMLSQLSHKLCRSLRKGEAS 131

Query: 143 NEMDKISPLSVRVMDV--CTPPPS-------------PHSDTY---------SMPLTPAS 178
           + +D  + L+   M+   C P  +             PHS +          S P  P  
Sbjct: 132 STLDSAARLAEAQMETRKCLPASTQTEEGISPDQGKNPHSASSAPSSQDSKQSEPKKPHI 191

Query: 179 SGSSQVDTC-----DYTSQYKM-YESMPSPKSVWRPW 209
           S + + +T      D+    +   ++  +  SVWRPW
Sbjct: 192 SAAQRQNTSVSFHQDFDCVIRQDMKAANAASSVWRPW 228


>gi|194208109|ref|XP_001496608.2| PREDICTED: transcription factor HES-2-like [Equus caballus]
          Length = 165

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 10/134 (7%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E    SKLEKADILE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINESLRQLKGLILPLLGRESSCYSKLEKADILEMTVRFLQEL- 70

Query: 90  RQQRLASNPVTD---ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMD 146
                +S PV     +D +  G+  C   +++ L +   ++  +  +L+ HL +R     
Sbjct: 71  ---PASSCPVAAPAPSDSYCEGYRACLARLARVLPACRVLEPAVSARLLEHLRRR---AA 124

Query: 147 KISPLSVRVMDVCT 160
             SP   R  D C 
Sbjct: 125 GASPNGRRAGDTCC 138


>gi|405969267|gb|EKC34248.1| Hairy/enhancer-of-split related with YRPW motif protein 1
           [Crassostrea gigas]
          Length = 300

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 10/114 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL K+  Q
Sbjct: 32  RKKRRGVIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHL-KLLHQ 88

Query: 92  QRLAS----NPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           + L +    +P   A  +R  GF  CA EV++ L +  G+DL+  L  +L+SHL
Sbjct: 89  KGLNTYNYPDPQALAIDYRGVGFRECAAEVARYLVAVEGLDLQDPLRMRLLSHL 142


>gi|390361319|ref|XP_001175739.2| PREDICTED: uncharacterized protein LOC752043 [Strongylocentrotus
           purpuratus]
          Length = 637

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 3/94 (3%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           + +KP +E++RRARIN  L +LK+L++ AL       SKLEKADILE+TV++L+ + RQQ
Sbjct: 11  RSLKPQMEKRRRARINDSLLQLKNLVLDALNKNNPRHSKLEKADILEMTVRYLRSIHRQQ 70

Query: 93  RLA---SNPVTDADRFRAGFTTCANEVSKCLAST 123
                  N   +  +++ G+  C  EVS+ L +T
Sbjct: 71  LSGIGSHNEQANIAQYQTGYAECMREVSRYLNAT 104


>gi|321463125|gb|EFX74143.1| DNA binding, transcription factor activity [Daphnia pulex]
          Length = 360

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL+LTV HL+ +  +
Sbjct: 49  RKRRRGIIEKRRRDRINHSLSELRRLVPSAFEKQGS--AKLEKAEILQLTVDHLKMLHAK 106

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
               LA +P   A D    GF  C  EV++ L S  G+D++  L  +LMSHL
Sbjct: 107 GLDALAYDPHKFAMDYHNIGFRECTAEVARYLVSVEGMDVQDPLRLRLMSHL 158


>gi|61098067|ref|NP_032262.2| transcription factor HES-2 [Mus musculus]
 gi|408360133|sp|O54792.2|HES2_MOUSE RecName: Full=Transcription factor HES-2; AltName: Full=Hairy and
           enhancer of split 2
 gi|26343737|dbj|BAC35525.1| unnamed protein product [Mus musculus]
 gi|148682981|gb|EDL14928.1| hairy and enhancer of split 2 (Drosophila) [Mus musculus]
 gi|187952811|gb|AAI38113.1| Hes2 protein [Mus musculus]
          Length = 157

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L AE    SKLEKADILE+TV+ LQ+  
Sbjct: 12  ELRKNLKPLLEKRRRARINESLSQLKGLVLPLLGAETSRSSKLEKADILEMTVRFLQEQP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                ++ P    + +  G+  C   +++ L +   ++  +  +L+ HL QR
Sbjct: 72  ATLYSSAAP-GPLNSYLEGYRACLARLARVLPACSVLEPAVSARLLEHLRQR 122


>gi|73956768|ref|XP_849965.1| PREDICTED: transcription factor HES-2 [Canis lupus familiaris]
          Length = 165

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 4/130 (3%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E  + SKLEKADILE+TV+ L+++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINASLRQLKGLILPLLGRESSHYSKLEKADILEMTVRFLRELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
              R A+     +D +  G+  C   +++ L +   ++  +  +L+ HL  R +     +
Sbjct: 72  ASYR-AARTQAPSDGYGEGYRACLARLARVLPACRVLEPAVSARLLEHLRGRAS---GPA 127

Query: 150 PLSVRVMDVC 159
           P + R  D C
Sbjct: 128 PDAGRAGDPC 137


>gi|55792369|gb|AAV59259.2| enhancer of split complex mgamma protein [Drosophila simulans]
          Length = 45

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/40 (82%), Positives = 37/40 (92%)

Query: 21 QLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVT 60
          Q+  +S+TYQYRKVMKPMLERKRRARIN+CLDELKDLMV 
Sbjct: 5  QMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVA 44


>gi|72144702|ref|XP_796692.1| PREDICTED: transcription factor HES-4-like [Strongylocentrotus
           purpuratus]
          Length = 273

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 5/118 (4%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           +  K + ERKRRARIN  L +LK ++   ++ +     K+EKADILE+TV++L+ ++  +
Sbjct: 18  RTAKHLTERKRRARINDSLLQLKSMVFPVIKKDISRHPKMEKADILEMTVRYLKDVQTPE 77

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR---LNEMDK 147
           +  S        + AGFT C +EVS  +++   ID+    +L+ HL  R   +N+ D+
Sbjct: 78  QGESK--GQVTTYHAGFTECLSEVSTFMSNCESIDIETRLRLLGHLADRCSTINDADQ 133


>gi|297666758|ref|XP_002811675.1| PREDICTED: transcription factor HES-4, partial [Pongo abelii]
          Length = 97

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 49/63 (77%)

Query: 30 QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
          ++RK  KP++E++RRARIN  L +LK L++ AL+ E    SKLEKADILE+TV+HL+ +R
Sbjct: 33 EHRKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLR 92

Query: 90 RQQ 92
          R Q
Sbjct: 93 RVQ 95


>gi|2723421|dbj|BAA24091.1| HES2 [Mus musculus]
          Length = 157

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 1/110 (0%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK +KP+LE++RRARIN  L +LK L++  L AE    SKLEKADILE+TV+ LQ+    
Sbjct: 14  RKNLKPLLEKRRRARINESLSQLKGLVLPLLGAETSRSSKLEKADILEMTVRFLQEQPAT 73

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
              ++ P    + +  G+  C   +++ L +   ++  +  +L+ HL QR
Sbjct: 74  LYSSAAP-GPLNSYLEGYRACLARLARVLPACSVLEPAVSARLLEHLRQR 122


>gi|300885297|gb|ADK45337.1| hairy enhancer of split [Hemicentrotus pulcherrimus]
          Length = 276

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 5/118 (4%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           +  K + ERKRRARIN  L +LK ++   ++ +     K+EKADILE+TV++L+ ++  +
Sbjct: 18  RTAKHLTERKRRARINDSLLQLKSMVFPVIKKDIARHPKMEKADILEMTVRYLKDVQTPE 77

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR---LNEMDK 147
           +  S        + AGFT C +EVS  +++   ID+    +L+ HL  R   +N+ D+
Sbjct: 78  QGESK--GQVTTYHAGFTECLSEVSTFMSNCESIDIETRLRLLGHLADRCSTINDADQ 133


>gi|348514774|ref|XP_003444915.1| PREDICTED: transcription factor HES-2-like [Oreochromis niloticus]
          Length = 199

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 23/188 (12%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK MKP++E++RRARIN  L+ LK L+V     +    SKLEKADILE+TV+ L  + 
Sbjct: 27  ELRKTMKPLMEKRRRARINESLNRLKSLIVPLTGRDQSRYSKLEKADILEMTVRFLGDIP 86

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
                 +N  +  + +  G+  C   VS  L           T L S   QR+N+  + S
Sbjct: 87  -----PANTKSSVENYGEGYNACLKRVSALLPQ---------TNLDSDAHQRINDFVQQS 132

Query: 150 PLSVRVMDVCTPPPSPHSDT----YSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPK-- 203
            +S  V   C    +  S T    +   L+  SS SS+V +   +S     ++   P+  
Sbjct: 133 -ISTTVTPTCLNCCAQSSMTLPQIHQRLLSIKSSFSSRVGSQQRSSAAVPNQAQSDPQTA 191

Query: 204 --SVWRPW 209
             +VWRPW
Sbjct: 192 SAAVWRPW 199


>gi|260813481|ref|XP_002601446.1| hypothetical protein BRAFLDRAFT_271445 [Branchiostoma floridae]
 gi|229286742|gb|EEN57458.1| hypothetical protein BRAFLDRAFT_271445 [Branchiostoma floridae]
          Length = 279

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 13/113 (11%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN CL EL+ L+ TA + +G   +KLEKA+IL++TV +L+ +  +
Sbjct: 33  RKKRRGIIEKRRRDRINNCLAELRRLVPTAFEKQGS--AKLEKAEILQMTVDYLKMLAAK 90

Query: 92  QRLASNPVTDADRF----RAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
              A +     D F      GF  CANEV++ + +  G+D++  L  +LM+HL
Sbjct: 91  GYHAYD-----DHFIDYRGIGFRECANEVARYMVTIEGLDIQDPLRIRLMNHL 138


>gi|410899653|ref|XP_003963311.1| PREDICTED: transcription factor HES-2-like [Takifugu rubripes]
          Length = 200

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 7/95 (7%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L  LK L++  +       SKLEKADILE+TV+ L+   
Sbjct: 27  ELRKTLKPLLEKRRRARINDSLTHLKGLILPLVGKGNARYSKLEKADILEMTVRFLRD-- 84

Query: 90  RQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAST 123
               L S P+ D AD +R G+  C   VS  L  T
Sbjct: 85  ----LPSTPIKDPADSYREGYKACLQRVSALLPQT 115


>gi|387539978|gb|AFJ70616.1| transcription cofactor HES-6 isoform a [Macaca mulatta]
          Length = 224

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 37/211 (17%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ- 86
           T   RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q 
Sbjct: 22  TRGDRKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQG 76

Query: 87  ----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
               + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL + +
Sbjct: 77  VLRGRAREREQLQAE---ASERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHLLESM 133

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSS----QVDTCDYTSQYKMYES 198
              +  S   +    +  PP  P    +     P S   S      D C    +    E 
Sbjct: 134 PLREGSSFQDLLGDALAGPPGVPGRSGWPAGGAPGSPIPSLPGPGDDLCSDLEEAPEAEL 193

Query: 199 MPSP--------------------KSVWRPW 209
             +P                    +SVWRPW
Sbjct: 194 SRAPAEGSDLVPTALGSLTAAQIARSVWRPW 224


>gi|327286362|ref|XP_003227899.1| PREDICTED: transcription factor HES-1-B-like [Anolis carolinensis]
          Length = 230

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 8/97 (8%)

Query: 57  LMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDAD-----RFRAGFTT 111
           L+V    A     SKLEKADILE+TV+HL+ ++R QR A   V + D     ++RAGF+ 
Sbjct: 11  LLVPGFVAASSRHSKLEKADILEMTVKHLRGLQRAQRSA---VLNTDPSVLGKYRAGFSE 67

Query: 112 CANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKI 148
           C NEV++ L++  G++  + T+L+ HL   ++++  I
Sbjct: 68  CVNEVTRFLSTCEGVNAEVRTRLLGHLAGCMSQISAI 104


>gi|410932103|ref|XP_003979433.1| PREDICTED: transcription factor HES-2-like, partial [Takifugu
           rubripes]
          Length = 147

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 7/95 (7%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L  LK L++  +       SKLEKADILE+TV+ L+   
Sbjct: 27  ELRKTLKPLLEKRRRARINDSLTHLKGLILPLVGKGNARYSKLEKADILEMTVRFLRD-- 84

Query: 90  RQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAST 123
               L S P+ D AD +R G+  C   VS  L  T
Sbjct: 85  ----LPSTPIKDPADSYREGYKACLQRVSALLPQT 115


>gi|196014586|ref|XP_002117152.1| hypothetical protein TRIADDRAFT_61134 [Trichoplax adhaerens]
 gi|190580374|gb|EDV20458.1| hypothetical protein TRIADDRAFT_61134 [Trichoplax adhaerens]
          Length = 247

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 17/127 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RINRCL ELK L+ TA + +G   +KLEKA+IL++TV HL+ ++  
Sbjct: 29  RKKKRGIIEKRRRDRINRCLHELKRLVPTAYEKQGS--AKLEKAEILQMTVDHLKYLKLH 86

Query: 92  QR---------LASNPVTDADRFRAGFTTCANEVSKCLASTPGID------LRLGTKLMS 136
            +            +P+   D    GF  CA E+++ ++   GID      +RL   L S
Sbjct: 87  LKEGRDGVAHYYGRSPLAAVDYKAYGFYGCAMELNRYISDHHGIDCSDTSRVRLLNHLES 146

Query: 137 HLGQRLN 143
            + QR +
Sbjct: 147 CMNQRFS 153


>gi|170065511|ref|XP_001867969.1| bHLH protein Hesr-1/Hey1 [Culex quinquefasciatus]
 gi|167862488|gb|EDS25871.1| bHLH protein Hesr-1/Hey1 [Culex quinquefasciatus]
          Length = 394

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 11/116 (9%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV HL+ + 
Sbjct: 108 QSRKRRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVDHLKTL- 164

Query: 90  RQQRLASNPVTDADRFR-----AGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
              R   +   D  RF       GF  C  EV++ L +  G+D++  L  +LMSHL
Sbjct: 165 -HARGLDDASYDPQRFAMDYHIIGFRECVAEVARYLVTIEGMDVQDPLRLRLMSHL 219


>gi|443718275|gb|ELU08980.1| hypothetical protein CAPTEDRAFT_228069 [Capitella teleta]
          Length = 273

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 87/165 (52%), Gaps = 20/165 (12%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN+ L EL+ L+ +A + +G   +KLEKA+IL++TV HL KM   
Sbjct: 38  RKRRRGVVEKRRRDRINQSLGELRRLVPSAFEKQGS--AKLEKAEILQMTVDHL-KMLHA 94

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL----GQ 140
           + L S  + D      D    GF  CA EV++ L S  G+DL+  L  +LM+HL     Q
Sbjct: 95  KGLNSFGMHDTAALAMDYRSVGFRECAAEVARYLVSVEGLDLQDPLRLRLMNHLQCYSAQ 154

Query: 141 R----LNEMDKISPLSVRVMDVCTPPPSPHSDTY--SMPLTPASS 179
           R       +  + P S    +   PP + +S     S P  P S+
Sbjct: 155 RDAASKASLQSLQPWSTSSFNAQYPPANSYSGGVFGSQPTPPCST 199


>gi|156390536|ref|XP_001635326.1| predicted protein [Nematostella vectensis]
 gi|156222419|gb|EDO43263.1| predicted protein [Nematostella vectensis]
 gi|363895627|gb|AEW42995.1| Hes3 [Nematostella vectensis]
          Length = 213

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 5/109 (4%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KPM+E+ RRARIN  L+ELK L++  L  +    SK+EKADILE+TV +L+  +R 
Sbjct: 20  RKAKKPMMEKLRRARINDSLNELKVLVLELLNKDASRYSKMEKADILEMTVGYLRAAQRI 79

Query: 92  QRL--ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           ++    S P +D   FRAGF  CA EVS  L+        L   L+SHL
Sbjct: 80  EKRTQGSTPPSD---FRAGFNACAVEVSNRLSPADANTDNLRETLLSHL 125


>gi|395851491|ref|XP_003798287.1| PREDICTED: transcription cofactor HES-6 [Otolemur garnettii]
          Length = 224

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 70/116 (60%), Gaps = 13/116 (11%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ- 86
           T + RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q 
Sbjct: 22  TRRNRKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQG 76

Query: 87  ----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
               + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 77  ALRGRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCHAIDATVAAELLNHL 129


>gi|322801736|gb|EFZ22333.1| hypothetical protein SINV_02370 [Solenopsis invicta]
          Length = 410

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 58/85 (68%), Gaps = 4/85 (4%)

Query: 70  SKLEKADILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGI 126
           SKLEKADILE+TV+H+Q M+RQQ    +A++PV    +FR GF+ CA EVS+ ++    +
Sbjct: 11  SKLEKADILEMTVKHIQTMQRQQLNAAVANDPVV-LTKFRTGFSECATEVSRYISRLENV 69

Query: 127 DLRLGTKLMSHLGQRLNEMDKISPL 151
           D  +  +L+SHL   ++ + +++P 
Sbjct: 70  DPAIKQRLVSHLNSCVSHLQQMAPF 94


>gi|324514450|gb|ADY45874.1| Protein deadpan [Ascaris suum]
          Length = 303

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 18/132 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++E++RRAR+N CLD+LK L+   L       SKLEKADILE+TV +LQ++  Q
Sbjct: 26  RKLKKPLMEKRRRARMNDCLDQLKQLL---LHIAPHQRSKLEKADILEMTVAYLQQL-HQ 81

Query: 92  QRLASNPVTDA----------DRFRAGFTTCANEVSKCLA---STPGIDLRLGTKLMSHL 138
           QR  S P T A          D F      C + V        +TP    +LG  L+ HL
Sbjct: 82  QRTMSPPNTIAGTAIYRQSYIDGFSMASAACVDYVRTVFTGDDATPYCQ-QLGVDLLQHL 140

Query: 139 GQRLNEMDKISP 150
              L    ++ P
Sbjct: 141 QSLLCAQLRVIP 152


>gi|158285665|ref|XP_564803.3| AGAP007450-PA [Anopheles gambiae str. PEST]
 gi|157020102|gb|EAL41793.3| AGAP007450-PA [Anopheles gambiae str. PEST]
          Length = 417

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 11/114 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV HL+ +   
Sbjct: 85  RKRRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVDHLKAL--H 140

Query: 92  QRLASNPVTDADRFR-----AGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
            R   +   D  RF       GF  C  EV++ L +  G+D++  L  +LMSHL
Sbjct: 141 ARGLDDASYDPQRFAMDYHIIGFRECVAEVARYLVTIEGMDVQDPLRLRLMSHL 194


>gi|402584493|gb|EJW78434.1| helix-loop-helix DNA-binding domain-containing protein, partial
           [Wuchereria bancrofti]
          Length = 143

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 69/114 (60%), Gaps = 8/114 (7%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++ERKRRARIN+CL E++ ++V  ++    +  K EKADILE++V +++++RR  R+A
Sbjct: 23  KPLMERKRRARINKCLFEMRQMLVDDVKNGSPSHFKWEKADILEMSVAYIRQLRR--RIA 80

Query: 96  SN----PVTDADRFRAGFTTCANEVSK-CLASTPGIDLR-LGTKLMSHLGQRLN 143
           +N     V     F  GF+ C  E+    L     ++LR    +L SHL  RL+
Sbjct: 81  ANSKAKKVFSLPYFVDGFSNCVREMQNYTLLEKWPVNLREYNNRLTSHLNARLH 134


>gi|410303210|gb|JAA30205.1| hairy and enhancer of split 6 [Pan troglodytes]
 gi|410341819|gb|JAA39856.1| hairy and enhancer of split 6 [Pan troglodytes]
          Length = 224

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 47/216 (21%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ- 86
           T   RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q 
Sbjct: 22  TRGDRKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQG 76

Query: 87  ----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
               + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL + +
Sbjct: 77  VLRGRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHLLESM 133

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV---------DTCDYTSQY 193
              +  S   +    +  PP +P  + +     PA                D C    + 
Sbjct: 134 PLREGSSFQDLLGDALAGPPGAPGRNGW-----PAGGAPGSPIPSPPGPGDDLCSDLEEA 188

Query: 194 KMYESMPSP--------------------KSVWRPW 209
              E   +P                    +SVWRPW
Sbjct: 189 PEAELSRAPAEGPDLVPAALGSLTTAQLARSVWRPW 224


>gi|357610825|gb|EHJ67165.1| hypothetical protein KGM_12972 [Danaus plexippus]
          Length = 314

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+  A + +G   +KLEKA+IL+LTV HL+ +  +
Sbjct: 70  RKRRRGVIEKKRRDRINTSLTELKRLVPAACEKQGS--AKLEKAEILQLTVDHLKMLHAK 127

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                A +P   A D    GF  CA EV++ L S  G+D++  L  +LMSHL
Sbjct: 128 GLDTYAYDPQRYAMDYHNIGFRECAAEVARYLVSCEGLDIQDPLRLRLMSHL 179


>gi|405957165|gb|EKC23396.1| Transcription factor HES-1 [Crassostrea gigas]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 63/92 (68%), Gaps = 5/92 (5%)

Query: 52  DELKDLMVTALQA-EGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTD---ADRFRA 107
           +++ D+  TA +  +G   +K+EKADILE+TV+HL++++RQQ  A N  TD    +++R 
Sbjct: 5   EKIPDVSSTASETRKGTRQNKMEKADILEMTVRHLRQLQRQQFSALN-ATDPVVINKYRL 63

Query: 108 GFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           GF  CA+EVSK L++T G++     +L++HL 
Sbjct: 64  GFNECASEVSKYLSNTDGLNAEFRARLLNHLA 95


>gi|393910070|gb|EFO20822.2| hypothetical protein LOAG_07668 [Loa loa]
          Length = 149

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 8/117 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           +K  KP++ERKRRARIN+CL E++ ++V   +    N SK EKADILE++V ++++++R 
Sbjct: 19  KKANKPLMERKRRARINKCLLEMRQMLVDDNRNGSPNYSKWEKADILEMSVDYIRQLKR- 77

Query: 92  QRLASNPVTDA----DRFRAGFTTCANEVSK-CLASTPGIDLR-LGTKLMSHLGQRL 142
            R+A N           F  GF+ C  E+    L      D+R   ++L SHL  RL
Sbjct: 78  -RIAVNSKAKQPFSLPYFVDGFSNCVREMQNYTLLEKWSADMREYNSRLTSHLTARL 133


>gi|259013448|ref|NP_001158467.1| hairy/enhancer-of-split related with YRPW motif 1-like
           [Saccoglossus kowalevskii]
 gi|197320555|gb|ACH68439.1| HEY-like protein [Saccoglossus kowalevskii]
          Length = 289

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 12/117 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+  A + +G   +KLEKA+IL++TV HL+ +  +
Sbjct: 31  RKKRRGIIEKRRRDRINNSLSELRRLVPAAFEKQGS--AKLEKAEILQMTVDHLKMLHAK 88

Query: 92  QRL---ASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                 + +P  DA      +RA GF  CA EV++ L +  G+D++  L  +LMSHL
Sbjct: 89  GACIDGSFHPYGDAHAYAMDYRALGFRECAAEVARYLVTVEGLDIQDPLRLRLMSHL 145


>gi|21361763|ref|NP_061115.2| transcription cofactor HES-6 isoform a [Homo sapiens]
 gi|50400609|sp|Q96HZ4.1|HES6_HUMAN RecName: Full=Transcription cofactor HES-6; AltName: Full=C-HAIRY1;
           AltName: Full=Class B basic helix-loop-helix protein 41;
           Short=bHLHb41; AltName: Full=Hairy and enhancer of split
           6
 gi|14044019|gb|AAH07939.1| Hairy and enhancer of split 6 (Drosophila) [Homo sapiens]
 gi|62988950|gb|AAY24337.1| unknown [Homo sapiens]
 gi|119591557|gb|EAW71151.1| hairy and enhancer of split 6 (Drosophila), isoform CRA_c [Homo
           sapiens]
 gi|158259683|dbj|BAF85800.1| unnamed protein product [Homo sapiens]
 gi|208966428|dbj|BAG73228.1| hairy and enhancer of split 6 [synthetic construct]
          Length = 224

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 13/116 (11%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ- 86
           T   RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q 
Sbjct: 22  TRGDRKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQG 76

Query: 87  ----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
               + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 77  VLRGRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHL 129


>gi|390334760|ref|XP_783676.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Strongylocentrotus purpuratus]
          Length = 330

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 10/156 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+  A + +G   +KLEKA+IL++TV HL+ +  +
Sbjct: 40  RKKRRGIIEKRRRDRINNSLTELRRLVPAAFEKQGS--AKLEKAEILQMTVDHLKYLHAK 97

Query: 92  QRLAS-NPVTDADRFRA-----GFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLN 143
               S +P  +A  +       GF  CA+EV++ L +  G+D++  L  +LMSHL   + 
Sbjct: 98  GIDGSFHPYGEAHAYAMDYRVLGFRECASEVARYLVTVEGMDIQDPLRLRLMSHLQCYVA 157

Query: 144 EMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASS 179
           + +  +     V      P   HS T ++P  P S 
Sbjct: 158 QREFQTRQHYTVSGHSQFPAHTHSQTPALPPPPHSG 193


>gi|312371891|gb|EFR19961.1| hypothetical protein AND_20881 [Anopheles darlingi]
          Length = 362

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 11/114 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV HL+ +   
Sbjct: 25  RKRRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVDHLKAL--H 80

Query: 92  QRLASNPVTDADRFR-----AGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
            R   +   D  RF       GF  C  EV++ L +  G+D++  L  +LMSHL
Sbjct: 81  ARGIDDVSYDPQRFAMDYHIIGFRECVAEVARYLVTIEGMDVQDPLRLRLMSHL 134


>gi|348577697|ref|XP_003474620.1| PREDICTED: transcription cofactor HES-6-like [Cavia porcellus]
          Length = 213

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 13/112 (11%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----- 86
           RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q     
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQGALRG 80

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 81  RAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHL 129


>gi|8051702|dbj|BAA96082.1| HES6 [Homo sapiens]
          Length = 224

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 13/116 (11%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ- 86
           T   RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q 
Sbjct: 22  TRGDRKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQG 76

Query: 87  ----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
               + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 77  VLRGRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHL 129


>gi|380814438|gb|AFE79093.1| transcription cofactor HES-6 isoform a [Macaca mulatta]
          Length = 224

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 37/211 (17%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ- 86
           T   RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LEL V+ +Q 
Sbjct: 22  TRGDRKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELAVRRVQG 76

Query: 87  ----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
               + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL + +
Sbjct: 77  VLRGRAREREQLQAE---ASERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHLLESM 133

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSS----QVDTCDYTSQYKMYES 198
              +  S   +    +  PP  P    +     P S   S      D C    +    E 
Sbjct: 134 PLREGSSFQDLLGDALAGPPGVPGRSGWPAGGAPGSPIPSLPGPGDDLCSDLEEAPEAEL 193

Query: 199 MPSP--------------------KSVWRPW 209
             +P                    +SVWRPW
Sbjct: 194 SRAPAEGSDLVPTALGSLTAAQIARSVWRPW 224


>gi|449673653|ref|XP_004208005.1| PREDICTED: transcription factor HES-1-B-like [Hydra magnipapillata]
          Length = 172

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 6/108 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R+  KP+LERKRRARIN  L+++K L+++ L  +    +K+EK DIL++TV +L     Q
Sbjct: 13  RRANKPLLERKRRARINNSLNDMKHLVLSFLNKDATKFTKMEKVDILDMTVHYL-----Q 67

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           Q+  S     +  +R+G+  C + + + + +   IDL+   ++MS + 
Sbjct: 68  QQFKSRGEQYSSVYRSGYEDCKHAMYQNIMAM-DIDLQTKYQIMSQMS 114


>gi|324514273|gb|ADY45814.1| Transcription factor HES-1 [Ascaris suum]
          Length = 304

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 62/95 (65%), Gaps = 5/95 (5%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           +K  KP++E++RRARINRCL E+K ++V  +++     SK EKADILE++V +++++  Q
Sbjct: 20  KKANKPLMEKRRRARINRCLYEMKQMLVDGIKSGSPGQSKWEKADILEMSVAYMRQL--Q 77

Query: 92  QRLASNPVTD---ADRFRAGFTTCANEVSKCLAST 123
           +++    V D   + +F  GF+ C  E+ K  A+ 
Sbjct: 78  KKVLQTSVEDVLPSSQFIEGFSECLKEMQKFNANA 112


>gi|146286204|sp|Q8AXV5.2|HEYL_DANRE RecName: Full=Hairy/enhancer-of-split related with YRPW motif-like
           protein
          Length = 310

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 12/124 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   SKLEKA+IL++TV HL+ +   
Sbjct: 44  RKKRRGIIEKRRRDRINHSLSELRRLVPSAFEKQGS--SKLEKAEILQMTVDHLKLL--- 98

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
             +      DA     D    GF  C  EV + L+S  G++    +G +L+SHL    +E
Sbjct: 99  HAMGGKGYFDARALAVDYRTLGFRECVGEVVRYLSSLEGVESSDPIGARLVSHLSHCASE 158

Query: 145 MDKI 148
           +D +
Sbjct: 159 LDPL 162


>gi|32189366|ref|NP_859425.1| hairy/enhancer-of-split related with YRPW motif-like protein [Danio
           rerio]
 gi|23954308|emb|CAD53343.1| basic helix-loop-helix transcription factor [Danio rerio]
          Length = 310

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 12/124 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   SKLEKA+IL++TV HL+ +   
Sbjct: 44  RKKRRGIIEKRRRDRINHSLSELRRLVPSAFEKQGS--SKLEKAEILQMTVDHLKLL--- 98

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
             +      DA     D    GF  C  EV + L+S  G++    +G +L+SHL    +E
Sbjct: 99  HAMGGKGYFDARALAVDYRTLGFRECVGEVVRYLSSLEGVESSDPIGARLVSHLSHCASE 158

Query: 145 MDKI 148
           +D +
Sbjct: 159 LDPL 162


>gi|332807519|ref|XP_001156221.2| PREDICTED: transcription factor HES-2 isoform 1 [Pan troglodytes]
 gi|332807521|ref|XP_514337.3| PREDICTED: transcription factor HES-2 isoform 3 [Pan troglodytes]
          Length = 174

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 68/113 (60%), Gaps = 2/113 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVS-KLEKADILELTVQHLQKM 88
           + RK +KP+LE++RRARIN+ L +LK L++  L  E  N S    KAD+LE+TV+ LQ++
Sbjct: 12  ELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSXXXXKADVLEMTVRFLQEL 71

Query: 89  RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                  + P+   D +R G++ C   +++ L +   ++  +  +L+ HL +R
Sbjct: 72  PASSWPTAAPLP-CDSYREGYSACVARLARVLPACRVLEPAVSARLLEHLWRR 123


>gi|443718276|gb|ELU08981.1| hypothetical protein CAPTEDRAFT_182542 [Capitella teleta]
          Length = 300

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 11/119 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN+ L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +  +
Sbjct: 33  RKKRRGVIEKRRRDRINQSLGELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKILSSK 90

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDL------RLGTKLMSHLGQR 141
                N  T A   D    GF  C +EVS+ L S  G+D+      RLG+ L  +  QR
Sbjct: 91  GLNGYNVDTAALALDYRAIGFRECMSEVSRYLVSMEGLDIQDPLRVRLGSHLQCYSAQR 149


>gi|432944519|ref|XP_004083420.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Oryzias latipes]
          Length = 283

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ ++ +
Sbjct: 47  RKKRRGIVEKRRRDRINSSLSELRRLVPTASEKQGS--AKLEKAEILQMTVDHLKMLQAE 104

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGID 127
           +     P    D    GF  C  EVS+ L+S  G+D
Sbjct: 105 KGNLEGPALALDFLSLGFRECVTEVSRFLSSMEGLD 140


>gi|189212391|gb|ACD84805.1| HESR2 [Capitella teleta]
          Length = 301

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 11/119 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN+ L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +  +
Sbjct: 34  RKKRRGVIEKRRRDRINQSLGELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKILSSK 91

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGIDL------RLGTKLMSHLGQR 141
                N  T A   D    GF  C  EVS+ L S  G+D+      RLG+ L  +  QR
Sbjct: 92  GLNGYNVDTAALALDYRAIGFRECMTEVSRYLVSMEGLDIQDPLRVRLGSHLQCYSAQR 150


>gi|410206846|gb|JAA00642.1| hairy and enhancer of split 6 [Pan troglodytes]
          Length = 224

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 47/216 (21%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ- 86
           T   RK  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+  Q 
Sbjct: 22  TRGDRKARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRGQG 76

Query: 87  ----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
               + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL + +
Sbjct: 77  VLRGRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHLLESM 133

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV---------DTCDYTSQY 193
              +  S   +    +  PP +P  + +     PA                D C    + 
Sbjct: 134 PLREGSSFQDLLGDALAGPPGAPGRNGW-----PAGGAPGSPIPSPPGPGDDLCSDLEEA 188

Query: 194 KMYESMPSP--------------------KSVWRPW 209
              E   +P                    +SVWRPW
Sbjct: 189 PEAELSRAPAEGPDLVPAALGSLTTAQLARSVWRPW 224


>gi|218751874|ref|NP_001136325.1| transcription cofactor HES-6 isoform b [Homo sapiens]
 gi|14009498|gb|AAK51634.1|AF260237_1 hairy/enhancer of split 6 [Homo sapiens]
 gi|119591556|gb|EAW71150.1| hairy and enhancer of split 6 (Drosophila), isoform CRA_b [Homo
           sapiens]
          Length = 222

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 15/116 (12%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ- 86
           T   RK  KP++E+KRRARIN  L EL+ L+  A        +KLE A++LELTV+ +Q 
Sbjct: 22  TRGDRKARKPLVEKKRRARINESLQELRLLLAGA-------EAKLENAEVLELTVRRVQG 74

Query: 87  ----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
               + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 75  VLRGRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHL 127


>gi|340720221|ref|XP_003398540.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Bombus terrestris]
          Length = 415

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 29  YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
           +  RK  + M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +
Sbjct: 220 HASRKRRRGMIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRSL 277

Query: 89  RRQQRLASNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           R +     +    A  + A G+  CA EV + L +  G+D R  L  +L+SHL
Sbjct: 278 RNKGPEGYDSTKLAMDYHAVGWGECAAEVGRYLVTMEGLDERDPLRLRLLSHL 330


>gi|9506777|ref|NP_062352.1| transcription cofactor HES-6 [Mus musculus]
 gi|50400660|sp|Q9JHE6.1|HES6_MOUSE RecName: Full=Transcription cofactor HES-6; AltName: Full=Hairy and
           enhancer of split 6
 gi|7547012|gb|AAF63757.1|AF247040_1 hairy/enhancer of split 6 [Mus musculus]
 gi|14009496|gb|AAK51633.1|AF260236_1 hairy/enhancer of split 6 [Mus musculus]
 gi|8051700|dbj|BAA96081.1| HES6 [Mus musculus]
 gi|12850802|dbj|BAB28856.1| unnamed protein product [Mus musculus]
 gi|15277646|gb|AAH12897.1| Hairy and enhancer of split 6 (Drosophila) [Mus musculus]
 gi|26345122|dbj|BAC36210.1| unnamed protein product [Mus musculus]
 gi|74199363|dbj|BAE33204.1| unnamed protein product [Mus musculus]
 gi|148708083|gb|EDL40030.1| hairy and enhancer of split 6 (Drosophila), isoform CRA_a [Mus
           musculus]
          Length = 224

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 15/113 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMV-TALQAEGENVSKLEKADILELTVQHLQ---- 86
           RK  KP++E+KRRARIN  L EL+ L+  T +QA      KLE A++LELTV+ +Q    
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLLLAGTEVQA------KLENAEVLELTVRRVQGALR 79

Query: 87  -KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
            + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 80  GRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVSAELLNHL 129


>gi|113679493|ref|NP_001038818.1| hairy and enhancer of split 2.2 [Danio rerio]
 gi|112419162|gb|AAI22269.1| Zgc:153398 [Danio rerio]
 gi|182889282|gb|AAI64884.1| Zgc:153398 protein [Danio rerio]
          Length = 172

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 7/95 (7%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE+KRRARIN  LD LK L++     +    SKLEKADILE+TV+ L  ++
Sbjct: 7   ELRKTLKPLLEKKRRARINDSLDRLKALILPLTGKDNCRYSKLEKADILEMTVRFLTDIQ 66

Query: 90  RQQRLASNPVTD-ADRFRAGFTTCANEVSKCLAST 123
                 + P  D A  F  G+TTC   VS  L  T
Sbjct: 67  ------TTPSKDTAVSFTEGYTTCLQRVSARLPQT 95


>gi|340377873|ref|XP_003387453.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Amphimedon queenslandica]
          Length = 290

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 13/124 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR-- 89
           RK  + ++E++RR RIN CL EL+ L+  A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 30  RKKRRGIIEKRRRDRINNCLMELRRLVPAAFEKQGS--AKLEKAEILQMTVDHLRHLHQT 87

Query: 90  RQQRLASNPVTDADRFRA-------GFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQ 140
           R  R  ++P++     RA       GF  C  EV++ + +  G+D++  +  ++++HL  
Sbjct: 88  RDPRGFTDPLSAYSNTRAFLDYRVMGFRECVAEVARYMTNVEGLDMKDPMRVRVLNHLEN 147

Query: 141 RLNE 144
            L +
Sbjct: 148 YLTQ 151


>gi|307204319|gb|EFN83075.1| Hairy/enhancer-of-split related with YRPW motif protein
           [Harpegnathos saltator]
          Length = 416

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 29  YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
           +  RK  + M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +
Sbjct: 221 HASRKRRRGMIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRTL 278

Query: 89  RRQQRLASNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           R +     +    A  + A G+  CA EV + L +  G+D R  L  +L+SHL
Sbjct: 279 RNKGPEGYDSTKLAMDYHAVGWGECAAEVGRYLVTMEGLDERDPLRLRLLSHL 331


>gi|350423437|ref|XP_003493482.1| PREDICTED: hypothetical protein LOC100744110 [Bombus impatiens]
          Length = 479

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 29  YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
           +  RK  + M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +
Sbjct: 284 HASRKRRRGMIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRSL 341

Query: 89  RRQQRLASNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           R +     +    A  + A G+  CA EV + L +  G+D R  L  +L+SHL
Sbjct: 342 RNKGPEGYDSTKLAMDYHAVGWGECAAEVGRYLVTMEGLDERDPLRLRLLSHL 394


>gi|4103348|gb|AAD01745.1| basic-helix-loop-helix transcription factor hairy2b [Xenopus
           laevis]
          Length = 274

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 4/92 (4%)

Query: 57  LMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCA 113
            M+  +  +    SKLEKADILE+TV+HL+ ++R Q    L S+P +   ++RAGF  C 
Sbjct: 34  FMIPCISPQSSRHSKLEKADILEMTVKHLRNLQRVQMTAALTSDP-SVLGKYRAGFNECT 92

Query: 114 NEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           NEV++ L++  G++  + T+L+ HL   L ++
Sbjct: 93  NEVTRFLSTCEGVNTEVRTRLLGHLSSCLGQI 124


>gi|149037582|gb|EDL92013.1| hairy and enhancer of split 6 (Drosophila), isoform CRA_a [Rattus
           norvegicus]
          Length = 224

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 15/113 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMV-TALQAEGENVSKLEKADILELTVQHLQ---- 86
           RK  KP++E+KRRARIN  L EL+ L+  T +QA      KLE A++LELTV+ +Q    
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLLLAGTEVQA------KLENAEVLELTVRRVQGALR 79

Query: 87  -KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
            + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 80  GRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVSAELLNHL 129


>gi|302564494|ref|NP_001181309.1| hairy/enhancer-of-split related with YRPW motif protein 2 [Macaca
           mulatta]
 gi|355748927|gb|EHH53410.1| hypothetical protein EGM_14046 [Macaca fascicularis]
 gi|380788047|gb|AFE65899.1| hairy/enhancer-of-split related with YRPW motif protein 2 [Macaca
           mulatta]
 gi|384940842|gb|AFI34026.1| hairy/enhancer-of-split related with YRPW motif protein 2 [Macaca
           mulatta]
          Length = 337

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 14/133 (10%)

Query: 15  NTVDIEQLQPISRTYQY--RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKL 72
           NT  + +L   + T Q   RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KL
Sbjct: 30  NTSSVIRLNSPTTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKL 87

Query: 73  EKADILELTVQHLQKMRRQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID 127
           EKA+IL++TV HL+ +   Q        DA     D    GF  C  EV++ L+S  G+D
Sbjct: 88  EKAEILQMTVDHLKML---QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLD 144

Query: 128 LR--LGTKLMSHL 138
               L  +L+SHL
Sbjct: 145 SSDPLRVRLVSHL 157


>gi|241847576|ref|XP_002415605.1| transcription factor hes-1, putative [Ixodes scapularis]
 gi|215509817|gb|EEC19270.1| transcription factor hes-1, putative [Ixodes scapularis]
          Length = 315

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 35/143 (24%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQR---LA 95
           +E++RRARINRCL +LK L+V + + E    ++LEKADILE+TV HLQ + RQ+R     
Sbjct: 1   MEKRRRARINRCLSQLKALLVDSSKPESPRHARLEKADILEMTVNHLQALHRQRRTVPFT 60

Query: 96  SNP--------------------VTDAD---RFRAGFTTCANEVSKCLAS--------TP 124
            NP                    + D++   +FRAG+  C  E  + L S          
Sbjct: 61  MNPAHEYMSLAALTCNSACPARLLDDSEVRHKFRAGYEECILETRRFLCSLADRQLLTNS 120

Query: 125 GID-LRLGTKLMSHLGQRLNEMD 146
           G D + +  ++++HL  R  E++
Sbjct: 121 GADPVSVRDRVLAHLQARAREIE 143


>gi|380017748|ref|XP_003692809.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Apis florea]
          Length = 400

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 29  YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
           +  RK  + M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +
Sbjct: 207 HASRKRRRGMIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRTL 264

Query: 89  RRQQRLASNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           R +     +    A  + A G+  CA EV + L +  G+D R  L  +L+SHL
Sbjct: 265 RNKGPEGYDSTKLAMDYHAVGWGECAAEVGRYLVTMEGLDERDPLRLRLLSHL 317


>gi|156390534|ref|XP_001635325.1| predicted protein [Nematostella vectensis]
 gi|156222418|gb|EDO43262.1| predicted protein [Nematostella vectensis]
          Length = 233

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 1/107 (0%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E+ RR RIN  L+E+K L++ +L  +    SK+EKADILE+TV+ L+++ RQ
Sbjct: 24  RKTKKPLMEKLRRDRINNSLNEMKLLVLESLNKDVSRYSKMEKADILEMTVKFLKEVNRQ 83

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
              A+N       ++AG+     EV   +++T      L  K  +HL
Sbjct: 84  DS-ATNGAQSWSDYKAGYNRRGVEVMPNISTTNTPTGDLTGKFYTHL 129


>gi|383862909|ref|XP_003706925.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Megachile rotundata]
          Length = 409

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 29  YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
           +  RK  + M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +
Sbjct: 217 HTSRKRRRGMIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRTL 274

Query: 89  RRQQRLASNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           R +     +    A  + A G+  CA EV + L +  G+D R  L  +L+SHL
Sbjct: 275 RNKGPEGYDSTKLAMDYHAVGWGECAAEVGRYLVTMEGLDERDPLRLRLLSHL 327


>gi|395733035|ref|XP_002813100.2| PREDICTED: transcription cofactor HES-6 [Pongo abelii]
          Length = 362

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 16/119 (13%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           + R+ Q RK   P++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ 
Sbjct: 160 VPRSPQARK---PLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRR 211

Query: 85  LQ-----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           +Q     + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 212 VQGVLRSRAREREQLQAE---ASERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHL 267


>gi|198413953|ref|XP_002122020.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 246

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ ++  A +  G   SKLEKA+IL+LTV+HL+ ++  
Sbjct: 27  RKKRRGVIEKRRRDRINNSLSELRRMIPAASEKHGS--SKLEKAEILQLTVEHLKTLQSA 84

Query: 92  QRLASNPVTD-----ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
                 P  D      D    GF  C +EV++ + S  GI   +   L+SHL
Sbjct: 85  ISKGYFPFMDVRTMAVDYHSFGFRECVSEVARYMISMDGIQSSVRENLLSHL 136


>gi|51012537|gb|AAT92575.1| hairy [Platypeza consobrina]
          Length = 266

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 8/77 (10%)

Query: 70  SKLEKADILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGI 126
           SKLEKADILE TV+HLQ+++RQQ    +A++P    ++F+AGF  CANEVS+     PGI
Sbjct: 9   SKLEKADILEKTVKHLQELQRQQAVMAVAADP-KIVNKFKAGFAECANEVSRF----PGI 63

Query: 127 DLRLGTKLMSHLGQRLN 143
           +  +  +L+ HL   +N
Sbjct: 64  EPAIKRRLLQHLSGCIN 80


>gi|410959984|ref|XP_003986577.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Felis catus]
          Length = 337

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDADRF-----RAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA  F       GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHAFAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|126310528|ref|XP_001369653.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Monodelphis domestica]
          Length = 341

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKSYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDTSDPLRVRLVSHL 157


>gi|118344332|ref|NP_001071989.1| transcription factor protein [Ciona intestinalis]
 gi|70569298|dbj|BAE06386.1| transcription factor protein [Ciona intestinalis]
          Length = 258

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 76/128 (59%), Gaps = 10/128 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  KP++E+KRR RIN+CL++LK +++TA+ AE    +KLEKADILE+TV++L+ +++ 
Sbjct: 14  RKTNKPIMEKKRRERINKCLEDLKSIVLTAV-AEESRPNKLEKADILEMTVRYLKSLQQG 72

Query: 92  QRLASNPVT-----DADRFRAGFTTCANEVSKCLAST----PGIDLRLGTKLMSHLGQRL 142
           + + +  ++     D D       +   E S+C  +T      + L   T+ + HL  + 
Sbjct: 73  KPIDAGILSLSRTSDYDDSDDDTKSSMTEYSQCDVTTMLNRSDVPLHFRTQFLGHLADKH 132

Query: 143 NEMDKISP 150
           N +++  P
Sbjct: 133 NPVERKKP 140


>gi|395534876|ref|XP_003769461.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Sarcophilus harrisii]
          Length = 340

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKSYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDTSDPLRVRLVSHL 157


>gi|332021542|gb|EGI61907.1| Hairy/enhancer-of-split related with YRPW motif protein [Acromyrmex
           echinatior]
          Length = 417

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 29  YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
           +  RK  + M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +
Sbjct: 221 HASRKRRRGMIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRTL 278

Query: 89  RRQQRLASNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           R +     +    A  + A G+  CA EV + L +  G+D R  L  +L+SHL
Sbjct: 279 RSKGPEGYDSTKLAMDYHAVGWGECAAEVGRYLVTMEGLDERDPLRLRLLSHL 331


>gi|70569822|dbj|BAE06483.1| transcription factor protein [Ciona intestinalis]
          Length = 248

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ ++  A +  G   SKLEKA+IL+LTV+HL+ ++  
Sbjct: 29  RKKRRGVIEKRRRDRINNSLSELRRMIPAASEKHGS--SKLEKAEILQLTVEHLKTLQSA 86

Query: 92  QRLASNPVTD-----ADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
                 P  D      D    GF  C +EV++ + S  GI   +   L+SHL
Sbjct: 87  ISKGYFPFMDVRTMAVDYHSFGFRECVSEVARYMISMDGIQSSVRENLLSHL 138


>gi|417397463|gb|JAA45765.1| Putative transcription cofactor hes-6 [Desmodus rotundus]
          Length = 227

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 9/110 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMV-TALQAEGENVSKLEKADILELTVQHLQKM-- 88
           RK  KP++E+KRRARIN  L EL+ L+  T +QA      KLE A++LELTV+ +Q    
Sbjct: 29  RKARKPLVEKKRRARINESLQELRLLLAGTEVQA------KLENAEVLELTVRRVQGALR 82

Query: 89  RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
            R + L       ++RF AG+  C +EV   +++   I+  +  +L++HL
Sbjct: 83  GRARGLEQLQAEASERFAAGYIQCMHEVHTFVSTCQAIEATVAAELLNHL 132


>gi|449497638|ref|XP_004174267.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein 2 [Taeniopygia guttata]
          Length = 336

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 13/140 (9%)

Query: 7   ENQINMINNTVDIEQLQPISRT-YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAE 65
           EN  +  +N+  I    P + +    RK  + ++E++RR RIN  L EL+ L+ TA + +
Sbjct: 23  ENNYSGQSNSSVIRSNSPTTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQ 82

Query: 66  GENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDA-----DRFRAGFTTCANEVSKCL 120
           G   +KLEKA+IL++TV HL+ +   Q        DA     D    GF  C  EV++ L
Sbjct: 83  GS--AKLEKAEILQMTVDHLKML---QATGGKGYFDAHSLAMDFMSIGFRECLTEVARYL 137

Query: 121 ASTPGIDLR--LGTKLMSHL 138
            S  G+D    L  +L+SHL
Sbjct: 138 TSVEGLDTSDPLRVRLVSHL 157


>gi|7274450|gb|AAF44780.1|AF237948_1 Gridlock [Danio rerio]
          Length = 324

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHSLAMDFLSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|148708087|gb|EDL40034.1| hairy and enhancer of split 6 (Drosophila), isoform CRA_e [Mus
           musculus]
          Length = 222

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 15/112 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----- 86
           RK  KP++E+KRRARIN  L EL+ L++   +A      KLE A++LELTV+ +Q     
Sbjct: 26  RKARKPLVEKKRRARINESLQELR-LLLAGTEA------KLENAEVLELTVRRVQGALRG 78

Query: 87  KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 79  RAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVSAELLNHL 127


>gi|190336941|gb|AAI62370.1| Zgc:136746 [Danio rerio]
 gi|190336945|gb|AAI62375.1| Zgc:136746 [Danio rerio]
          Length = 324

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHSLAMDFLSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|449277680|gb|EMC85774.1| Transcription factor HES-1-B, partial [Columba livia]
          Length = 190

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 58/82 (70%), Gaps = 4/82 (4%)

Query: 70  SKLEKADILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGI 126
           SKLEKADILE+TV+HL+ ++R Q    L+++P T   ++RAGF+ C NEV++ L++  G+
Sbjct: 5   SKLEKADILEMTVKHLRSLQRAQMTAALSTDP-TVLGKYRAGFSECMNEVTRFLSTCEGV 63

Query: 127 DLRLGTKLMSHLGQRLNEMDKI 148
           +  + T+L+ HL   + +++ +
Sbjct: 64  NTEVRTRLLGHLASCMTQINAM 85


>gi|449277952|gb|EMC85952.1| Hairy/enhancer-of-split related with YRPW motif protein 2, partial
           [Columba livia]
          Length = 285

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 12/138 (8%)

Query: 8   NQINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGE 67
           N    IN++V        +     RK  + ++E++RR RIN  L EL+ L+ TA + +G 
Sbjct: 25  NYSGQINSSVIRSNSPTTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS 84

Query: 68  NVSKLEKADILELTVQHLQKMRRQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLAS 122
             +KLEKA+IL++TV HL+ +   Q        DA     D    GF  C  EV++ L S
Sbjct: 85  --AKLEKAEILQMTVDHLKML---QATGGKGYFDAHSLAMDFMSIGFRECLTEVARYLTS 139

Query: 123 TPGIDLR--LGTKLMSHL 138
             G+D    L  +L+SHL
Sbjct: 140 VEGLDTSDPLRVRLVSHL 157


>gi|119591558|gb|EAW71152.1| hairy and enhancer of split 6 (Drosophila), isoform CRA_d [Homo
           sapiens]
          Length = 226

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 67/111 (60%), Gaps = 13/111 (11%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ-----K 87
           +  KP++E+KRRARIN  L EL+ L+  A     E  +KLE A++LELTV+ +Q     +
Sbjct: 29  RARKPLVEKKRRARINESLQELRLLLAGA-----EVQAKLENAEVLELTVRRVQGVLRGR 83

Query: 88  MRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
            R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 84  AREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHL 131


>gi|225579021|ref|NP_571697.2| hairy/enhancer-of-split related with YRPW motif protein 2 [Danio
           rerio]
 gi|146345431|sp|Q9I9L0.2|HEY2_DANRE RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 2; AltName: Full=Protein gridlock
 gi|90112091|gb|AAI14264.1| Zgc:136746 protein [Danio rerio]
          Length = 324

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHSLAMDFLSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|426234415|ref|XP_004011191.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein 2 [Ovis aries]
          Length = 334

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 12/117 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQR 141
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL  R
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLQLR 160


>gi|431838773|gb|ELK00703.1| Hairy/enhancer-of-split related with YRPW motif protein 2 [Pteropus
           alecto]
          Length = 337

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|343183392|ref|NP_001230258.1| hairy/enhancer-of-split related with YRPW motif protein 2 [Sus
           scrofa]
          Length = 337

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|410911754|ref|XP_003969355.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Takifugu rubripes]
          Length = 327

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 17/163 (10%)

Query: 14  NNTVDIEQLQPISRT-YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKL 72
           N +  +  + P + T  Q RK  + ++E++RR RIN CL EL+ L+ +A + +G   +KL
Sbjct: 30  NMSSPLGSMSPTTSTQVQARKRRRGIIEKRRRDRINNCLSELRRLVPSAFEKQGS--AKL 87

Query: 73  EKADILELTVQHLQKMRRQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID 127
           EKA+IL++TV HL+ +            DA     D    GF  C  E ++ L+   G+D
Sbjct: 88  EKAEILQMTVDHLKML---HAAGGKGYFDAHALAMDYRSLGFRECLAETARYLSIIEGLD 144

Query: 128 ----LRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPH 166
               LRL  +L+SHL    ++ +  S LS          P+ H
Sbjct: 145 TADPLRL--RLVSHLNNYASQREAHSGLSHLAWGSAFGSPAAH 185


>gi|301613098|ref|XP_002936042.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Xenopus (Silurana) tropicalis]
          Length = 335

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLGSVEGLDSSDPLRVRLVSHL 157


>gi|444729407|gb|ELW69825.1| Hairy/enhancer-of-split related with YRPW motif protein 2 [Tupaia
           chinensis]
          Length = 337

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|345784549|ref|XP_541232.3| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Canis lupus familiaris]
          Length = 197

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 38  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 92

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 93  QATGGKGYFDAHALALDFMSIGFRECLGEVARYLSSVEGLDSSDPLRARLVSHL 146


>gi|297679078|ref|XP_002817374.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Pongo abelii]
          Length = 337

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|296199175|ref|XP_002746973.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Callithrix jacchus]
          Length = 337

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|301758667|ref|XP_002915182.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein 2-like [Ailuropoda melanoleuca]
          Length = 337

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|345489604|ref|XP_001603396.2| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein-like [Nasonia vitripennis]
          Length = 310

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 10/120 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +R +
Sbjct: 130 RKRRRGMIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRTLRNK 187

Query: 92  QRLASNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHLG-----QRLN 143
                +    A  + A G+  C  EV + L +  G+D R  L  +L+SHL      QRLN
Sbjct: 188 GAEGYDSTKLAMDYHAVGWGECVAEVGRYLVTMEGLDERDPLRLRLLSHLQSFHREQRLN 247


>gi|332213206|ref|XP_003255711.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Nomascus leucogenys]
          Length = 337

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|403281960|ref|XP_003932435.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Saimiri boliviensis boliviensis]
          Length = 337

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|410210724|gb|JAA02581.1| hairy/enhancer-of-split related with YRPW motif 2 [Pan troglodytes]
          Length = 337

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|6912414|ref|NP_036391.1| hairy/enhancer-of-split related with YRPW motif protein 2 [Homo
           sapiens]
 gi|332824880|ref|XP_527497.3| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Pan troglodytes]
 gi|397514803|ref|XP_003827661.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Pan paniscus]
 gi|74762767|sp|Q9UBP5.1|HEY2_HUMAN RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 2; AltName: Full=Cardiovascular helix-loop-helix
           factor 1; Short=hCHF1; AltName: Full=Class B basic
           helix-loop-helix protein 32; Short=bHLHb32; AltName:
           Full=HES-related repressor protein 2; AltName:
           Full=Hairy and enhancer of split-related protein 2;
           Short=HESR-2; AltName: Full=Hairy-related transcription
           factor 2; Short=HRT-2; Short=hHRT2; AltName:
           Full=Protein gridlock homolog
 gi|6636409|gb|AAF20173.1|AF173901_1 basic helix-loop-helix factor 1 [Homo sapiens]
 gi|7141334|gb|AAF37296.1|AF232238_1 HES-related repressor protein 1 HERP1 [Homo sapiens]
 gi|7274452|gb|AAF44781.1|AF237949_1 GRIDLOCK [Homo sapiens]
 gi|11127956|gb|AAG31157.1|AF311884_1 hairy-related transcription factor 2 [Homo sapiens]
 gi|6006502|emb|CAB56839.1| basic-helix-loop-helix protein, bHLH [Homo sapiens]
 gi|8570525|dbj|BAA96781.1| basic-helix-loop-helix protein [Homo sapiens]
 gi|14043436|gb|AAH07707.1| Hairy/enhancer-of-split related with YRPW motif 2 [Homo sapiens]
 gi|54696996|gb|AAV38870.1| hairy/enhancer-of-split related with YRPW motif 2 [Homo sapiens]
 gi|54696998|gb|AAV38871.1| hairy/enhancer-of-split related with YRPW motif 2 [Homo sapiens]
 gi|61357649|gb|AAX41421.1| hairy/enhancer-of-split related with YRPW motif 2 [synthetic
           construct]
 gi|61357655|gb|AAX41422.1| hairy/enhancer-of-split related with YRPW motif 2 [synthetic
           construct]
 gi|119568520|gb|EAW48135.1| hairy/enhancer-of-split related with YRPW motif 2 [Homo sapiens]
 gi|208966432|dbj|BAG73230.1| hairy/enhancer-of-split related with YRPW motif 2 [synthetic
           construct]
          Length = 337

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|54696994|gb|AAV38869.1| hairy/enhancer-of-split related with YRPW motif 2 [synthetic
           construct]
 gi|61367819|gb|AAX43051.1| hairy/enhancer-of-split related with YRPW motif 2 [synthetic
           construct]
          Length = 338

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYLDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|354500215|ref|XP_003512196.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Cricetulus griseus]
          Length = 407

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 119 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 173

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 174 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 227


>gi|344264414|ref|XP_003404287.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Loxodonta africana]
          Length = 335

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 16/116 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    LR+  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRM--RLVSHL 157


>gi|158260909|dbj|BAF82632.1| unnamed protein product [Homo sapiens]
          Length = 337

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|300796672|ref|NP_001178984.1| hairy/enhancer-of-split related with YRPW motif protein 2 [Bos
           taurus]
 gi|296484234|tpg|DAA26349.1| TPA: hairy/enhancer-of-split related with YRPW motif 2-like [Bos
           taurus]
 gi|440910656|gb|ELR60428.1| Hairy/enhancer-of-split related with YRPW motif protein 2 [Bos
           grunniens mutus]
          Length = 337

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|281306821|ref|NP_569101.1| hairy/enhancer-of-split related with YRPW motif 2 [Rattus
           norvegicus]
 gi|149032853|gb|EDL87708.1| hairy/enhancer-of-split related with YRPW motif 2 [Rattus
           norvegicus]
          Length = 339

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALATDFMSIGFRECLTEVARYLSSVEGLDPSDPLRVRLVSHL 157


>gi|395816404|ref|XP_003781692.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2 [Otolemur garnettii]
          Length = 337

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSADPLRVRLVSHL 157


>gi|26327369|dbj|BAC27428.1| unnamed protein product [Mus musculus]
          Length = 333

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 16/116 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 43  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 97

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    LR+  +L+SHL
Sbjct: 98  QATGGKGYFDAHALATDFMSIGFRECLTEVARYLSSVEGLDPSDPLRV--RLVSHL 151


>gi|410899651|ref|XP_003963310.1| PREDICTED: transcription factor HES-2-like [Takifugu rubripes]
          Length = 200

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 20/119 (16%)

Query: 17  VDIEQLQPIS---------RTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGE 67
           V  E LQ  S            ++RK MKP++E++RRARIN  L++LK+L++     +  
Sbjct: 5   VGFETLQSFSPRRTVAKRKEALEFRKTMKPLMEKRRRARINDSLNKLKNLIIPLTGRDKI 64

Query: 68  NVSKLEKADILELTVQHLQKMRRQQRLASNPVTD---ADRFRAGFTTCANEVSKCLAST 123
             SKLEKADILE+ V+ L  +         PVT    AD +R G+  C   V   L  T
Sbjct: 65  RYSKLEKADILEMAVRFLSGI--------PPVTTKNPADSYREGYKACLQRVPALLPQT 115


>gi|291396918|ref|XP_002714849.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif 2
           [Oryctolagus cuniculus]
          Length = 338

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSADPLRVRLVSHL 157


>gi|322782481|gb|EFZ10430.1| hypothetical protein SINV_02987 [Solenopsis invicta]
          Length = 340

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 29  YQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
           +  RK  + M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +
Sbjct: 223 HASRKRRRGMIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRTL 280

Query: 89  RRQQRLASNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           R +     +    A  + A G+  CA EV + L +  G+D R  L  +L+SHL
Sbjct: 281 RSKGPEGYDSTKLAMDYHAVGWGECAAEVGRYLVTMEGLDERDPLRLRLLSHL 333


>gi|194216416|ref|XP_001503188.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Equus caballus]
          Length = 337

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|20065723|dbj|BAB88818.1| hairy E(SPL) like bHLH transcription factor [Halocynthia roretzi]
          Length = 292

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 47/58 (81%), Gaps = 1/58 (1%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
          RK  KP++E+KRR RINRCLDELK++++ A+  E    +KLEKADILE+TV++L+ ++
Sbjct: 14 RKTNKPIMEKKRRERINRCLDELKNIVLRAVNEESR-PNKLEKADILEMTVRYLRTIK 70


>gi|355694538|gb|AER99704.1| hairy/enhancer-of-split related with YRPW motif 2 [Mustela putorius
           furo]
          Length = 145

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 21  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 75

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 76  QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 129


>gi|7305159|ref|NP_038932.1| hairy/enhancer-of-split related with YRPW motif protein 2 [Mus
           musculus]
 gi|81917633|sp|Q9QUS4.1|HEY2_MOUSE RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 2; AltName: Full=HES-related repressor protein
           2; AltName: Full=Hairy and enhancer of split-related
           protein 2; Short=HESR-2; AltName: Full=Hairy-related
           transcription factor 2; Short=HRT-2; Short=mHRT2;
           AltName: Full=Protein gridlock homolog
 gi|6503006|gb|AAF14546.1|AF172287_1 hairy-related transcription factor 2 [Mus musculus]
 gi|6636411|gb|AAF20174.1|AF173902_1 basic helix-loop-helix factor 1 [Mus musculus]
 gi|7141338|gb|AAF37298.1|AF232240_1 HES-related repressor protein 1 HERP1 [Mus musculus]
 gi|6900327|emb|CAB71346.1| basic-helix-loop-helix protein [Mus musculus]
 gi|27544788|dbj|BAC55066.1| hairy and enhancer of split related 2 [Mus musculus]
 gi|73695275|gb|AAI03577.1| Hairy/enhancer-of-split related with YRPW motif 2 [Mus musculus]
 gi|73695442|gb|AAI03576.1| Hairy/enhancer-of-split related with YRPW motif 2 [Mus musculus]
 gi|111494046|gb|AAI05652.1| Hairy/enhancer-of-split related with YRPW motif 2 [Mus musculus]
 gi|111494181|gb|AAI05653.1| Hairy/enhancer-of-split related with YRPW motif 2 [Mus musculus]
 gi|148672908|gb|EDL04855.1| hairy/enhancer-of-split related with YRPW motif 2 [Mus musculus]
          Length = 339

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALATDFMSIGFRECLTEVARYLSSVEGLDPSDPLRVRLVSHL 157


>gi|363895629|gb|AEW42996.1| Hl1 [Nematostella vectensis]
          Length = 237

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 7/118 (5%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M+ ++   E++         R   KP++E++RR RINR L+ELK L++ A   +    +K
Sbjct: 1   MVQDSAKDEKMTEAENDIDDRXWSKPVMEKRRRERINRSLEELKRLVLEAQHRDCSRYTK 60

Query: 72  LEKADILELTVQHLQKMRRQQRLA---SNPVTDADRFRAGFTTCA-NEVSKCLASTPG 125
           LEKADILE+TV+HL+ ++ QQ+ A   SN    A+   AG   CA  EV++ +   PG
Sbjct: 61  LEKADILEMTVKHLRTLQSQQKTAMALSNQAHQAN-CCAGCNGCAVTEVTQFMV--PG 115


>gi|74192228|dbj|BAE34310.1| unnamed protein product [Mus musculus]
          Length = 339

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALATDFMSIGFRECLTEVARYLSSVEGLDPSDPLRVRLVSHL 157


>gi|301790635|ref|XP_002930399.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Ailuropoda melanoleuca]
          Length = 328

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV +CL    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRCLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|405965295|gb|EKC30677.1| Transcription factor HES-1 [Crassostrea gigas]
          Length = 288

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 9/96 (9%)

Query: 51  LDELKDLMV----TALQAEGENVSKLEKADILELTVQHLQKMRRQQ---RLASNPVTDAD 103
           +D L ++M     T+L+   +  SKLEKADILE+TV+HL+ ++R Q    +AS+P T   
Sbjct: 3   VDTLDNVMSKEHKTSLRKSSQ-YSKLEKADILEMTVKHLRNLQRNQLASAMASDP-TVVT 60

Query: 104 RFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           +FRAGF  CANEV + L +   +   + ++L+SHL 
Sbjct: 61  KFRAGFHECANEVIRYLGTVQNVGSDVKSRLVSHLS 96


>gi|149609744|ref|XP_001521383.1| PREDICTED: transcription factor HES-2-like [Ornithorhynchus
           anatinus]
          Length = 168

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP++E++RRARIN  L++LK L++  +  +    SKLEKADILE+TV+ LQ++ 
Sbjct: 12  ELRKTLKPLMEKRRRARINESLNQLKGLILPLIGKDSSRYSKLEKADILEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
                A+   T A+ +R G+  C + ++  L +   +D  +  +L+ HL QR        
Sbjct: 72  TSGAPATP--TPAESYREGYRACVSRLAGLLPACSLLDRDVCGRLLDHL-QRSGG----- 123

Query: 150 PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
                        PSP       P   A+  S            +   S      +WRPW
Sbjct: 124 ----------AAAPSPRGSKARGPDPRAAPASPAPPAHRPAPPPRPAPS-----GLWRPW 168


>gi|194384104|dbj|BAG64825.1| unnamed protein product [Homo sapiens]
          Length = 281

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 3   RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 57

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 58  QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 111


>gi|348518407|ref|XP_003446723.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Oreochromis niloticus]
          Length = 329

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 12/122 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA   E ++ +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKKRRGIIEKRRRDRINNSLSELRRLVPTAF--EKQSSAKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
           Q        DA     D    GF  C  EVS+ L++  G+D    L ++L+SHL    ++
Sbjct: 105 QATGGKGYFDAHALALDFLSLGFRECVTEVSRYLSAVEGLDSGDPLRSRLLSHLASCASQ 164

Query: 145 MD 146
            D
Sbjct: 165 RD 166


>gi|410930832|ref|XP_003978802.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Takifugu rubripes]
          Length = 325

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   SKLEKA+IL++TV HL+ +   
Sbjct: 44  RKKRRGIIEKRRRDRINHSLSELRRLVPSAFEKQGS--SKLEKAEILQMTVDHLKLL--- 98

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR-LGTKLMSHLGQRLNEM 145
             +      DA     D    GF  C  EV + L+S  G     +G +L+SHL    +E+
Sbjct: 99  HAVGGKGYFDARALAVDYRTLGFRECVGEVVRYLSSLDGDSTDPIGARLVSHLSHCASEL 158

Query: 146 DKI 148
           D +
Sbjct: 159 DPL 161


>gi|339238329|ref|XP_003380719.1| hairy/enhancer-of-split related with YRPW motif protein
           [Trichinella spiralis]
 gi|316976353|gb|EFV59662.1| hairy/enhancer-of-split related with YRPW motif protein
           [Trichinella spiralis]
          Length = 298

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 12/127 (9%)

Query: 19  IEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADIL 78
           + Q   I   Y  R  +    E++RR +IN CL EL+ L+  A++ +G    KLEKA+IL
Sbjct: 68  VNQCPSILLDYAVRNALTAY-EKRRRDKINNCLAELRLLVPAAIEKQG--TQKLEKAEIL 124

Query: 79  ELTVQHLQKMRRQQRLASNPVTDADRFRA-----GFTTCANEVSKCLASTPGIDLR--LG 131
           +LTV++L+ +        + V +  RF A     GF  CANEV++ L S   +D++  L 
Sbjct: 125 QLTVEYLRLLHSTG--VDSAVMEKHRFAADYHMMGFRECANEVARYLTSVETLDIQDPLR 182

Query: 132 TKLMSHL 138
            +L++HL
Sbjct: 183 IRLINHL 189


>gi|224797873|gb|ACN62900.1| hairy/enhancer-of-split related with YRPW motif 2 [Ovis aries]
          Length = 248

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 22  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 76

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 77  QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 130


>gi|181340039|ref|NP_001116717.1| uncharacterized protein LOC559147 [Danio rerio]
          Length = 150

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 3   NMIHENQINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTAL 62
           N+I E   +   + + + Q +     ++ RK +KP++E++RRARIN  L+ LK L++  +
Sbjct: 4   NIITEAHPHSFGSRMTVAQRKE---AHELRKTLKPLMEKRRRARINDSLNHLKTLILPLV 60

Query: 63  QAEGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCL 120
             +    SKLEKADILE+TV+ L+ +      +S+     D ++ G+  C   +S  L
Sbjct: 61  GKDASRYSKLEKADILEMTVRFLRDL-----PSSSAKGQTDSYKEGYKACLQRISTML 113


>gi|62007686|gb|AAX60641.1| enhancer of split m3 protein [Drosophila melanogaster]
          Length = 40

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 35/35 (100%)

Query: 25 ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMV 59
          +S+TYQYRKVMKP+LERKRRARIN+CLD+LKDLMV
Sbjct: 5  MSKTYQYRKVMKPLLERKRRARINKCLDDLKDLMV 39


>gi|348588038|ref|XP_003479774.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Cavia porcellus]
          Length = 345

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L+S  G+D    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157


>gi|348522835|ref|XP_003448929.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Oreochromis niloticus]
          Length = 331

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   SKLEKA+IL++TV HL+ +   
Sbjct: 44  RKKRRGIIEKRRRDRINHSLSELRRLVPSAFEKQGS--SKLEKAEILQMTVDHLKLL--- 98

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR-LGTKLMSHLGQRLNEM 145
             +      DA     D    GF  C  EV + L+S  G     +G +L+SHL    +E+
Sbjct: 99  HAMGGKGYFDARALAVDYRTLGFRECVGEVVRYLSSLEGDSPDPIGARLVSHLSHCASEL 158

Query: 146 DKI 148
           D +
Sbjct: 159 DPL 161


>gi|410970735|ref|XP_003991833.1| PREDICTED: transcription factor HES-1 [Felis catus]
          Length = 311

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 59/83 (71%), Gaps = 4/83 (4%)

Query: 70  SKLEKADILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTPGI 126
           SKLEKADILE+TV+HL+ ++R Q    L+++P +   ++RAGF+ C NEV++ L++  G+
Sbjct: 104 SKLEKADILEMTVKHLRNLQRAQMTAALSTDP-SVLGKYRAGFSECMNEVTRFLSTCEGV 162

Query: 127 DLRLGTKLMSHLGQRLNEMDKIS 149
           +  + T+L+ HL   + +++ ++
Sbjct: 163 NTEVRTRLLGHLANCMTQINAMT 185


>gi|51012533|gb|AAT92573.1| hairy [Megaselia abdita]
          Length = 247

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 12/110 (10%)

Query: 70  SKLEKADILELTVQHLQKMRRQQRLASNPVTDA---DRFRAGFTTCANEVSKCLASTPGI 126
           +KLEKADILE TV+HLQ ++RQQ + +  V D    ++F+AGF  CANEVS+     PG+
Sbjct: 6   AKLEKADILEKTVKHLQDLQRQQAVMAQ-VADPKVINKFKAGFVECANEVSRF----PGV 60

Query: 127 DLRLGTKLMSHLGQRLN----EMDKISPLSVRVMDVCTPPPSPHSDTYSM 172
           D  +  +L+ HL    N    E  +      +   + +PP SP  D + +
Sbjct: 61  DPMVKRRLLMHLNSVHNGFKQEYARQQVQQQQQHILPSPPSSPEQDHHQI 110


>gi|307186375|gb|EFN72009.1| Hairy/enhancer-of-split related with YRPW motif protein [Camponotus
           floridanus]
          Length = 184

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 5/104 (4%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASN 97
           M+E+KRR RIN  L EL+ L+  A  A   +  KLEKA+IL+LTV+HL+ +R +     +
Sbjct: 1   MIEKKRRDRINASLGELRRLVPAA--ARDPHSGKLEKAEILQLTVEHLRTLRNKGPEGYD 58

Query: 98  PVTDADRFRA-GFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
               A  + A G+  CA EV + L +  G+D R  L  +L+SHL
Sbjct: 59  STKLAMDYHAVGWGECAAEVGRYLVTMEGLDERDPLRLRLLSHL 102


>gi|51012511|gb|AAT92562.1| hairy [Clogmia albipunctata]
          Length = 316

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 8/79 (10%)

Query: 70  SKLEKADILELTVQHLQKMRRQQRL---ASNPVTDADRFRAGFTTCANEVSKCLASTPGI 126
           SKLEKADILE TV+HLQ ++RQQ +   AS+P    ++F+AGFT CANEV +      GI
Sbjct: 6   SKLEKADILEKTVKHLQDLQRQQSVLSQASDPGV-INKFKAGFTECANEVGRFG----GI 60

Query: 127 DLRLGTKLMSHLGQRLNEM 145
           D  +  +L+ HL   LN +
Sbjct: 61  DPIVKRRLLQHLSNCLNGV 79


>gi|348569202|ref|XP_003470387.1| PREDICTED: class E basic helix-loop-helix protein 41-like [Cavia
           porcellus]
          Length = 189

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 17/101 (16%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM--------- 88
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+ +         
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 89  -----RRQQRLASNPV-TDADRFRAGFTTCANEVSKCLAST 123
                +  +R   +P+ +D D F +GF TCA EVS+ LAS 
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVSQYLASA 149


>gi|119591555|gb|EAW71149.1| hairy and enhancer of split 6 (Drosophila), isoform CRA_a [Homo
           sapiens]
          Length = 224

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 15/111 (13%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ-----K 87
           +  KP++E+KRRARIN  L EL+ L+  A        +KLE A++LELTV+ +Q     +
Sbjct: 29  RARKPLVEKKRRARINESLQELRLLLAGA-------EAKLENAEVLELTVRRVQGVLRGR 81

Query: 88  MRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
            R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 82  AREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVAAELLNHL 129


>gi|326915967|ref|XP_003204283.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Meleagris gallopavo]
          Length = 454

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 72  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 126

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L S  G+D    L  +L+SHL
Sbjct: 127 QATGGKGYFDAHSLAMDFMSIGFRECLTEVARYLTSVEGLDTSDPLRVRLVSHL 180


>gi|440908601|gb|ELR58604.1| Transcription factor HES-2, partial [Bos grunniens mutus]
          Length = 89

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 44/59 (74%)

Query: 30 QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
          + RK +KP+LE++RRARIN  L +LK L++  L  E    SKLEKADILE+TV+ LQ++
Sbjct: 25 ELRKSLKPLLEKRRRARINESLSQLKGLILPLLGRESSRYSKLEKADILEMTVRFLQEL 83


>gi|301776973|ref|XP_002923913.1| PREDICTED: transcription factor HES-2-like [Ailuropoda melanoleuca]
          Length = 134

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E  + SKLEKADILE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINASLRQLKGLILPLLGRESSHYSKLEKADILEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCL 120
                A+     +D +  G+  C   +++ L
Sbjct: 72  ASSCAAAA-PEPSDSYGEGYRACLARLARVL 101


>gi|61557199|ref|NP_001013197.1| transcription cofactor HES-6 [Rattus norvegicus]
 gi|56269647|gb|AAH87597.1| Hairy and enhancer of split 6 (Drosophila) [Rattus norvegicus]
          Length = 234

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 71/117 (60%), Gaps = 15/117 (12%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMV-TALQAEGENVSKLEKADILELTVQHLQ 86
           + ++ +  KP++E+KRRARIN  L EL+ L+  T +QA      KLE A++LELTV+ +Q
Sbjct: 32  SSRFPQARKPLVEKKRRARINESLQELRLLLAGTEVQA------KLENAEVLELTVRRVQ 85

Query: 87  -----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
                + R +++L +     ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 86  GALRGRAREREQLQAEA---SERFAAGYIQCMHEVHTFVSTCQAIDATVSAELLNHL 139


>gi|281346156|gb|EFB21740.1| hypothetical protein PANDA_013133 [Ailuropoda melanoleuca]
          Length = 111

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L  E  + SKLEKADILE+TV+ LQ++ 
Sbjct: 12  ELRKSLKPLLEKRRRARINASLRQLKGLILPLLGRESSHYSKLEKADILEMTVRFLQELP 71

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCL 120
                A+     +D +  G+  C   +++ L
Sbjct: 72  ASSCAAAA-PEPSDSYGEGYRACLARLARVL 101


>gi|170590938|ref|XP_001900228.1| Helix-loop-helix DNA-binding domain containing protein [Brugia
           malayi]
 gi|158592378|gb|EDP30978.1| Helix-loop-helix DNA-binding domain containing protein [Brugia
           malayi]
          Length = 289

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 9/92 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++E++RRAR+N CLD+LK L+   L     + +KLEKADILE+TV +L +M+  
Sbjct: 26  RKLKKPLMEKRRRARMNECLDQLKHLL---LHISPNHRTKLEKADILEMTVAYLNQMQHP 82

Query: 92  QRLASNPVTDA---DRFRAGFTTCANEVSKCL 120
              +++  ++A     +  GFT  A   S CL
Sbjct: 83  PSPSTSFDSNAIYQQSYAEGFTVAA---SACL 111


>gi|270017241|gb|EFA13687.1| hypothetical protein TcasGA2_TC001593 [Tribolium castaneum]
          Length = 316

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL++TV HL+ +  +
Sbjct: 69  RKKRRGVIEKKRRDRINMSLSELKRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHAK 126

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                  +P   A D    GF  C  EV++ L    G+D++  L  +L SHL
Sbjct: 127 GLDAFTYDPHKYAMDYHGMGFRECVAEVARYLERIEGLDVQNPLRLRLTSHL 178


>gi|321476760|gb|EFX87720.1| hypothetical protein DAPPUDRAFT_306420 [Daphnia pulex]
          Length = 238

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 22/129 (17%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGEN----VSKLEKADILELTV----- 82
           R+  KP++E++RRARIN  L  LK L++   +A   N     S+LEKADILELTV     
Sbjct: 17  RRTNKPLMEKRRRARINHSLSVLKSLIIKD-EANSSNPASQSSRLEKADILELTVMHLRT 75

Query: 83  ------QHLQKMRRQQRLA---SNPV-TDADRFRAGFTTCANEVSKCLASTPGIDLRLGT 132
                 +HLQ+ + Q  LA    N +  D   +R G+  C +++ + L   P  DL    
Sbjct: 76  LEKEKEEHLQQQKEQSELAGKEGNKIDNDVKSYRLGYQACCHDIGRFL-DGPVSDL-TKE 133

Query: 133 KLMSHLGQR 141
           +LM HL +R
Sbjct: 134 RLMEHLQER 142


>gi|327261577|ref|XP_003215606.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           2-like [Anolis carolinensis]
          Length = 334

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ TA + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           Q        DA     D    GF  C  EV++ L S  G++    L  +L+SHL
Sbjct: 104 QATGGKGYFDAHALAMDFISIGFRECLTEVARYLTSVEGLESSDPLRVRLVSHL 157


>gi|9506775|ref|NP_062109.1| transcription factor HES-2 [Rattus norvegicus]
 gi|547628|sp|P35429.1|HES2_RAT RecName: Full=Transcription factor HES-2; AltName: Full=Hairy and
           enhancer of split 2
 gi|436245|dbj|BAA03118.1| HES-2 [Rattus norvegicus]
 gi|149024727|gb|EDL81224.1| hairy and enhancer of split 2 (Drosophila), isoform CRA_a [Rattus
           norvegicus]
 gi|149024728|gb|EDL81225.1| hairy and enhancer of split 2 (Drosophila), isoform CRA_a [Rattus
           norvegicus]
          Length = 157

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 42/184 (22%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK +KP+LE++RRARIN  L +LK L++  L AE    SKLEKADILE+TV+ L+   
Sbjct: 12  ELRKSLKPLLEKRRRARINESLSQLKGLVLPLLGAETSRYSKLEKADILEMTVRFLR--- 68

Query: 90  RQQRLASNPVTDA----DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
             ++ AS   T+A    D +  G+  C   +++ L +   ++  +  +L+ HL QR    
Sbjct: 69  --EQPASVCSTEAPGSLDSYLEGYRACLARLARVLPACSVLEPAVSARLLEHLRQR---- 122

Query: 146 DKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSV 205
                       V   PPS         LTPAS+ +                       +
Sbjct: 123 -----------TVSGGPPS---------LTPASASAPAPSPPVPPPSSL---------GL 153

Query: 206 WRPW 209
           WRPW
Sbjct: 154 WRPW 157


>gi|312222682|ref|NP_001185935.1| transcription factor HES-2 isoform 2 [Bos taurus]
 gi|154757479|gb|AAI51679.1| HES2 protein [Bos taurus]
          Length = 82

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 44/59 (74%)

Query: 30 QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM 88
          + RK +KP+LE++RRARIN  L +LK L++  L  E    SKLEKADILE+TV+ LQ++
Sbjct: 12 ELRKSLKPLLEKRRRARINESLSQLKGLILPLLGRESSRYSKLEKADILEMTVRFLQEL 70


>gi|91095337|ref|XP_968161.1| PREDICTED: similar to AGAP007450-PA [Tribolium castaneum]
          Length = 363

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 7/112 (6%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL++TV HL+ +  +
Sbjct: 116 RKKRRGVIEKKRRDRINMSLSELKRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHAK 173

Query: 92  --QRLASNPVTDA-DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                  +P   A D    GF  C  EV++ L    G+D++  L  +L SHL
Sbjct: 174 GLDAFTYDPHKYAMDYHGMGFRECVAEVARYLERIEGLDVQNPLRLRLTSHL 225


>gi|47228237|emb|CAG07632.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 127

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 19/116 (16%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTA-LQAEGENVSKLEKADILELTVQHLQKMRRQQRL 94
           KP++E+KRRARIN+ L EL+ L+  A LQ++ EN      A++LE+TV+ ++ + + Q  
Sbjct: 4   KPLVEKKRRARINKSLQELRLLVADADLQSKAEN------AEVLEMTVERVENVLQNQTQ 57

Query: 95  ASN------PVTDA------DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
             +      P  +A      +RF AG+  C ++V   +++ PG D  +  +L++HL
Sbjct: 58  GKDLTASHIPNVEASSREARERFTAGYIQCMHDVHTFVSACPGFDQTVAAELLNHL 113


>gi|395526607|ref|XP_003765451.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Sarcophilus harrisii]
          Length = 581

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 20/127 (15%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA+IL++TV HL+ +R
Sbjct: 299 QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEILQMTVDHLKMLR 356

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLA------STPGIDLRLGTKLMSHL 138
                  + + DA     D    GF  C  EV + L       ST  I LR    L+SHL
Sbjct: 357 ---ATGGSGLFDARALAVDYRSIGFRECLTEVGRYLGVLEGQSSTEPIRLR----LLSHL 409

Query: 139 GQRLNEM 145
              + EM
Sbjct: 410 HNYIAEM 416


>gi|51012529|gb|AAT92571.1| hairy [Haematopota pluvialis]
          Length = 315

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 23/132 (17%)

Query: 57  LMVTALQAEGENVSKLEKADILELTVQHLQKM---RRQQRLASNPVTDADRFRAGFTTCA 113
           L++ A + +    SKLEKADILE TV+HLQ++   +     AS+P    ++F+AGF  CA
Sbjct: 2   LILDATKKDPARHSKLEKADILEKTVKHLQELQRQQAAMAQASDPKV-INKFKAGFAECA 60

Query: 114 NEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM-------------DKISPLSVRVMDVCT 160
           NEVS+     PG++  L  +L+ HL   +N +               I P+ V V+   +
Sbjct: 61  NEVSRF----PGLEPALKRRLLQHLSNCINGVKSELQQHRNNTTPQPIQPMQVHVLP--S 114

Query: 161 PPPSPHSDTYSM 172
           PP SP  D + M
Sbjct: 115 PPSSPEQDQHMM 126


>gi|326933141|ref|XP_003212667.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Meleagris gallopavo]
          Length = 192

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 17/144 (11%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA+IL++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEILQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHLGQ 140
                      DA     D    GF  C  EV + L    G      +RL  +L+SHL  
Sbjct: 99  --HATGGAGFLDARALAVDYRSIGFRECLTEVVRYLGVLEGQSTADPIRL--RLLSHLNN 154

Query: 141 RLNEMDKISPLSVRVMDVCTPPPS 164
            + EM+  SP +  ++ V T P S
Sbjct: 155 YVAEMEP-SPAAASLLPVQTWPWS 177


>gi|312084102|ref|XP_003144137.1| helix-loop-helix DNA-binding domain-containing protein [Loa loa]
 gi|307760699|gb|EFO19933.1| helix-loop-helix DNA-binding domain-containing protein [Loa loa]
          Length = 289

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 17/96 (17%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK+ KP++E++RRAR+N CLD+LK L+   L     + +KLEKADILE+TV +L +M+  
Sbjct: 26  RKLKKPLMEKRRRARMNECLDQLKHLL---LHISPNHRTKLEKADILEMTVAYLNQMQH- 81

Query: 92  QRLASNPVTDADR-------FRAGFTTCANEVSKCL 120
                +P T  D        +  GF   A   S CL
Sbjct: 82  ---PPSPSTSFDNNAIYQQSYAEGFAVAA---SACL 111


>gi|375313020|gb|AFA51415.1| hairy enhancer of split-like 1, partial [Daphnia magna]
          Length = 235

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 19/131 (14%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVT--ALQAEGENVSKLEKADILELTV------- 82
           R+  KP++E++RRARIN  L  LK L++   A  +   + S+LEKADILELTV       
Sbjct: 17  RRTNKPLMEKRRRARINHSLSILKSLIIKDEANSSNATSQSRLEKADILELTVMHLRTLE 76

Query: 83  ----QHLQKMRRQQRLA---SNPV-TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
               +HLQ+ ++Q  LA   SN +  D   +R G+  C +++ + L   P  +L    +L
Sbjct: 77  KEKEEHLQQQKQQSELAGKESNKIDNDVKSYRLGYQACCHDIGRFL-DGPLHEL-TKERL 134

Query: 135 MSHLGQRLNEM 145
           M HL ++  ++
Sbjct: 135 MEHLLEKKQQL 145


>gi|363742422|ref|XP_001234406.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           [Gallus gallus]
          Length = 318

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 79/162 (48%), Gaps = 25/162 (15%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA+IL++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEILQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHLGQ 140
                      DA     D    GF  C  EV + L    G      +RL  +L+SHL  
Sbjct: 99  --HATGGAGFLDARALAVDYRSIGFRECLTEVVRYLGVLEGQSTADPIRL--RLLSHLNN 154

Query: 141 RLNEMDKISPLSVRVMDVCT--------PPPSPHSDTYSMPL 174
            + EM+  SP +  ++ V T        P P P  +    PL
Sbjct: 155 YVAEMEP-SPAAASLLPVQTWPWSFLHSPVPVPRREAAPAPL 195


>gi|156390614|ref|XP_001635365.1| predicted protein [Nematostella vectensis]
 gi|156222458|gb|EDO43302.1| predicted protein [Nematostella vectensis]
          Length = 270

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 46/60 (76%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
          R++MKP+ ER RR RIN  L ELK L+++AL  +    S++EKADILE+TV +++KM+R+
Sbjct: 23 RRIMKPITERLRRERINSSLKELKFLVLSALGQDVSRYSRMEKADILEMTVSYIRKMQRK 82


>gi|363895778|gb|AEW42998.1| Hl2 [Nematostella vectensis]
          Length = 270

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 46/60 (76%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
          R++MKP+ ER RR RIN  L ELK L+++AL  +    S++EKADILE+TV +++KM+R+
Sbjct: 23 RRIMKPITERLRRERINSSLKELKFLVLSALGQDVSRYSRMEKADILEMTVSYIRKMQRK 82


>gi|432884248|ref|XP_004074455.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Oryzias latipes]
          Length = 376

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 11/123 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   SKLEKA+IL++TV HL+ +   
Sbjct: 101 RKKRRGIIEKRRRDRINHSLSELRRLVPSAFEKQGS--SKLEKAEILQMTVDHLKLL--- 155

Query: 92  QRLASNPVTD-----ADRFRAGFTTCANEVSKCLASTPGIDLR-LGTKLMSHLGQRLNEM 145
             +      D      D    GF  C  EV + L+S  G     +G +L+SHL    +E+
Sbjct: 156 HAIGGKGYFDTRALAVDYRTLGFRECVGEVVRYLSSLEGESPDPIGARLVSHLSHCASEL 215

Query: 146 DKI 148
           D +
Sbjct: 216 DPL 218


>gi|146286205|sp|Q9NQ87.2|HEYL_HUMAN RecName: Full=Hairy/enhancer-of-split related with YRPW motif-like
           protein; Short=hHeyL; AltName: Full=Class B basic
           helix-loop-helix protein 33; Short=bHLHb33; AltName:
           Full=Hairy-related transcription factor 3; Short=HRT-3;
           Short=hHRT3
          Length = 328

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 13/131 (9%)

Query: 24  PISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQ 83
           P S   Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV 
Sbjct: 36  PSSSQMQARKKHRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVD 93

Query: 84  HLQKMRRQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLM 135
           HL+ +            DA      FR+ GF  C  EV + L    G   R   +  +L+
Sbjct: 94  HLKML---HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLL 150

Query: 136 SHLGQRLNEMD 146
           SHL     EM+
Sbjct: 151 SHLNSYAAEME 161


>gi|7657154|ref|NP_055386.1| hairy/enhancer-of-split related with YRPW motif-like protein [Homo
           sapiens]
 gi|11127958|gb|AAG31158.1|AF311885_1 hairy-related transcription factor 3 [Homo sapiens]
 gi|7018334|emb|CAB75716.1| HEYL protein [Homo sapiens]
 gi|13543881|gb|AAH06087.1| Hairy/enhancer-of-split related with YRPW motif-like [Homo sapiens]
 gi|119627665|gb|EAX07260.1| hairy/enhancer-of-split related with YRPW motif-like [Homo sapiens]
 gi|167773931|gb|ABZ92400.1| hairy/enhancer-of-split related with YRPW motif-like [synthetic
           construct]
 gi|208966434|dbj|BAG73231.1| hairy/enhancer-of-split related with YRPW motif-like [synthetic
           construct]
          Length = 328

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 13/131 (9%)

Query: 24  PISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQ 83
           P S   Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV 
Sbjct: 36  PSSSQMQARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVD 93

Query: 84  HLQKMRRQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLM 135
           HL+ +            DA      FR+ GF  C  EV + L    G   R   +  +L+
Sbjct: 94  HLKML---HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLL 150

Query: 136 SHLGQRLNEMD 146
           SHL     EM+
Sbjct: 151 SHLNSYAAEME 161


>gi|194390846|dbj|BAG62182.1| unnamed protein product [Homo sapiens]
          Length = 300

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 13/131 (9%)

Query: 24  PISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQ 83
           P S   Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV 
Sbjct: 8   PSSSQMQARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVD 65

Query: 84  HLQKMRRQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLM 135
           HL+ +            DA      FR+ GF  C  EV + L    G   R   +  +L+
Sbjct: 66  HLKML---HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLL 122

Query: 136 SHLGQRLNEMD 146
           SHL     EM+
Sbjct: 123 SHLNSYAAEME 133


>gi|157278203|ref|NP_001098201.1| bHLH protein DEC1a [Oryzias latipes]
 gi|86355057|dbj|BAE78763.1| bHLH protein DEC1a [Oryzias latipes]
          Length = 400

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 16/122 (13%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKTLSALLEQQQQ 113

Query: 93  RLAS---------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLN 143
           ++ +         +   D++ FR+GF  CA EV   LAS         ++++SHL +   
Sbjct: 114 KIVALQKDLQISDHAGDDSEMFRSGFHLCAKEVVHYLASQESSTDLTPSRVISHLQKVAT 173

Query: 144 EM 145
           E+
Sbjct: 174 EV 175


>gi|307174250|gb|EFN64877.1| Transcription factor HES-4 [Camponotus floridanus]
          Length = 72

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 6/78 (7%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNP 98
           +E++RRARIN+ L  LK L++ + + E    SKLEKADILELTV+HLQ   RQ+ LA   
Sbjct: 1   MEKRRRARINQSLAALKALILDSARLENTKHSKLEKADILELTVRHLQ---RQRSLAQPG 57

Query: 99  VTDADRFRAGFTTCANEV 116
           ++   R++AG+  C+ E 
Sbjct: 58  LS---RYKAGYQDCSRET 72


>gi|344254746|gb|EGW10850.1| Transcription factor HES-3 [Cricetulus griseus]
          Length = 201

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 39/217 (17%)

Query: 15  NTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEK 74
            T    +  P      +RK+ KP++E+KRRARIN  L++LK L+      +     KLEK
Sbjct: 2   GTEPTSRGSPSGSASSFRKISKPLMEKKRRARINMSLEQLKSLLERHYSHQIRK-RKLEK 60

Query: 75  ADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCL----ASTPGIDLRL 130
           ADILEL+V++++ ++   +    PV     + +GF  C   VS+ L    AS+    LR 
Sbjct: 61  ADILELSVKYMKSLQSSSQ-GLWPVPSGVDYPSGFQGCLPGVSQRLRRGGASS---GLRC 116

Query: 131 GTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT 190
              L    G   +  D  S  ++ V+  C P         ++   P+++GSSQ       
Sbjct: 117 PLVLERRAG---STTDSASSQALSVLSPCLP---------AVWAPPSAAGSSQAPLSSLP 164

Query: 191 SQYKMYES---MPSPK---------------SVWRPW 209
               + ES    P+P+                +WRPW
Sbjct: 165 LPRGLPESSTGAPAPQPAPNCQTEESARPGLGLWRPW 201


>gi|62008603|gb|AAX61043.1| enhancer of split m5 protein [Drosophila melanogaster]
          Length = 101

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 3/103 (2%)

Query: 43  RRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDA 102
           RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  ++K   +Q+   +P+   
Sbjct: 1   RRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVFMRKQVVKQQAPVSPLP-M 57

Query: 103 DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM 145
           D F+ G+    +E+S+ +A TP + + +G  +M+HLG     M
Sbjct: 58  DSFKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLGVEFQRM 100


>gi|351713678|gb|EHB16597.1| Hairy/enhancer-of-split related with YRPW motif-like protein
           [Heterocephalus glaber]
          Length = 328

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 28/181 (15%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRHLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
             EM+  SP+    + +   P  P S  +S P  PA             SQ  +   +PS
Sbjct: 157 AAEMEP-SPIPSSPLAL---PAWPWSFFHSCPGLPA-----------LNSQLAILGRVPS 201

Query: 202 P 202
           P
Sbjct: 202 P 202


>gi|354494505|ref|XP_003509377.1| PREDICTED: transcription cofactor HES-6-like [Cricetulus griseus]
          Length = 224

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 15/113 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM--- 88
           RK  KP++E+KRRARIN  L EL+ L+        E  +KLE A++LELTV+ +      
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLLLAGT-----EVQTKLENAEVLELTVRRVXXXXXX 80

Query: 89  ---RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
               R+Q  A      ++RF AG+  C +EV   +++   ID  +  +L++HL
Sbjct: 81  XGEEREQLQAEA----SERFAAGYIHCMHEVHTFVSTCQAIDATVSAELLNHL 129


>gi|281344899|gb|EFB20483.1| hypothetical protein PANDA_020837 [Ailuropoda melanoleuca]
          Length = 279

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 13/117 (11%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASN 97
           ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ +         
Sbjct: 1   IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML---HATGGT 55

Query: 98  PVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQRLNEMD 146
              DA      FR+ GF  C  EV +CL    G   R   +  +L+SHL     EM+
Sbjct: 56  GFFDARALAVDFRSIGFRECLTEVIRCLGVLEGPSSRADPVRIRLLSHLNSYAAEME 112


>gi|269785273|ref|NP_001161564.1| hey-like transcription factor [Saccoglossus kowalevskii]
 gi|268054121|gb|ACY92547.1| hey-like transcription factor [Saccoglossus kowalevskii]
          Length = 325

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 18/121 (14%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ------ 91
           ++E++RR RIN CL EL   +  A   +     KLEKA+ILE+TV++L+ ++R       
Sbjct: 16  VIEKRRRDRINNCLSELSQTVPAAFAKQTSG--KLEKAEILEMTVEYLRAIQRSGLAAKF 73

Query: 92  QRLASNPVTD--------ADRFRAGFTTCANEVSKCLASTPGIDLRLG--TKLMSHLGQR 141
           +    NP T         ++ ++ G+  C  E+++ L    GIDL      ++MS+L QR
Sbjct: 74  ENAGYNPETTWQDSWQELSEYYQTGYNDCMKEIARYLTDIEGIDLNDSRCVRIMSYLQQR 133

Query: 142 L 142
            
Sbjct: 134 F 134


>gi|432095457|gb|ELK26653.1| Hairy/enhancer-of-split related with YRPW motif-like protein
           [Myotis davidii]
          Length = 294

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 7/122 (5%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLH 71

Query: 90  RQQRLA-SNPVTDADRFRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQRLNE 144
                   +  T A  FR+ GF  C  EV + L    G   R   +  +L+SHL     E
Sbjct: 72  ATGGTGFFDARTLAVDFRSIGFRECLTEVVRYLGVLEGPSSRADPVRIRLLSHLNSYAAE 131

Query: 145 MD 146
           M+
Sbjct: 132 ME 133


>gi|224096047|ref|XP_002189911.1| PREDICTED: class E basic helix-loop-helix protein 41 [Taeniopygia
           guttata]
          Length = 276

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 22/143 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
               ++  +R   +PV  D D F +GF TCA EV + L+          T       Q L
Sbjct: 109 KIIALQNGERSMKSPVQADLDAFHSGFQTCAKEVLQYLSR-----FESWTPREQRCAQLL 163

Query: 143 NEMDKISPLSVRVMDVCTPPPSP 165
             +  IS   +    + +PPP P
Sbjct: 164 GHLHSISSQFLPGPQLLSPPPGP 186


>gi|449267050|gb|EMC78018.1| Hairy/enhancer-of-split related with YRPW motif protein 1, partial
           [Columba livia]
          Length = 249

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASN 97
           ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +         
Sbjct: 1   IIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTA---GGK 55

Query: 98  PVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMDKISP 150
              DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++ +  S 
Sbjct: 56  GYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAASS 115

Query: 151 LSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
               +  +       H    S PL  A SG     T   +++
Sbjct: 116 AHTGIGHIPWGSAFGHHPHISHPLLLAQSGHGNTSTTASSAE 157


>gi|332231579|ref|XP_003264972.1| PREDICTED: class E basic helix-loop-helix protein 40 isoform 1
           [Nomascus leucogenys]
 gi|441665469|ref|XP_004091812.1| PREDICTED: class E basic helix-loop-helix protein 40 isoform 2
           [Nomascus leucogenys]
          Length = 412

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 26/152 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N  T  + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM------DKISPLSVRVMDVCTPPPSP 165
           + ++E+       K S  + RVMD    P SP
Sbjct: 177 RVVSELLQGGTSRKPSDPAPRVMDFKEKPSSP 208


>gi|62006375|gb|AAX60065.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006377|gb|AAX60066.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006379|gb|AAX60067.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006381|gb|AAX60068.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006383|gb|AAX60069.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006387|gb|AAX60071.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006389|gb|AAX60072.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006391|gb|AAX60073.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006393|gb|AAX60074.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006395|gb|AAX60075.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006399|gb|AAX60077.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006401|gb|AAX60078.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006405|gb|AAX60080.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006407|gb|AAX60081.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006409|gb|AAX60082.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006411|gb|AAX60083.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006413|gb|AAX60084.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006415|gb|AAX60085.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006417|gb|AAX60086.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006419|gb|AAX60087.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006421|gb|AAX60088.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006423|gb|AAX60089.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006425|gb|AAX60090.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006427|gb|AAX60091.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006431|gb|AAX60093.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006433|gb|AAX60094.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006435|gb|AAX60095.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006437|gb|AAX60096.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006439|gb|AAX60097.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006443|gb|AAX60099.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006445|gb|AAX60100.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006447|gb|AAX60101.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006449|gb|AAX60102.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006451|gb|AAX60103.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006453|gb|AAX60104.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006455|gb|AAX60105.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006457|gb|AAX60106.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006469|gb|AAX60112.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006471|gb|AAX60113.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006475|gb|AAX60115.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006477|gb|AAX60116.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006479|gb|AAX60117.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006481|gb|AAX60118.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006483|gb|AAX60119.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006487|gb|AAX60121.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006491|gb|AAX60123.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006493|gb|AAX60124.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006495|gb|AAX60125.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006497|gb|AAX60126.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006501|gb|AAX60128.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006503|gb|AAX60129.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006505|gb|AAX60130.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006507|gb|AAX60131.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006509|gb|AAX60132.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006515|gb|AAX60135.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006517|gb|AAX60136.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006519|gb|AAX60137.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006521|gb|AAX60138.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006525|gb|AAX60140.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006529|gb|AAX60142.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006533|gb|AAX60144.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006539|gb|AAX60147.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006543|gb|AAX60149.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006545|gb|AAX60150.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006547|gb|AAX60151.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006549|gb|AAX60152.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006553|gb|AAX60154.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006555|gb|AAX60155.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006557|gb|AAX60156.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006559|gb|AAX60157.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 110

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 34/137 (24%)

Query: 80  LTVQHLQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           LTV +L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT 
Sbjct: 1   LTVNYL-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTH 58

Query: 134 LMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQ 192
           LM  LG +L +M +       ++D+   P                     V+  D   S+
Sbjct: 59  LMKQLGHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSK 93

Query: 193 YKMYESMPSPKSVWRPW 209
               E +   + VWRPW
Sbjct: 94  SPREEDIHHGEEVWRPW 110


>gi|332808519|ref|XP_003308045.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           isoform 2 [Pan troglodytes]
          Length = 300

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 70

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 71  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 128

Query: 142 LNEMD 146
             EM+
Sbjct: 129 AAEME 133


>gi|308451366|ref|XP_003088645.1| hypothetical protein CRE_30602 [Caenorhabditis remanei]
 gi|308246251|gb|EFO90203.1| hypothetical protein CRE_30602 [Caenorhabditis remanei]
          Length = 168

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 45/68 (66%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++E+KRRARIN+ L +LK +++          +K EKADILE+TV++L +MR  Q   
Sbjct: 26  KPLMEKKRRARINKSLSQLKQILIQDGHKNSAQHAKWEKADILEMTVEYLHQMRSSQACL 85

Query: 96  SNPVTDAD 103
           S+P T  +
Sbjct: 86  SSPSTSCN 93


>gi|291399202|ref|XP_002715779.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           [Oryctolagus cuniculus]
          Length = 300

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 17/156 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 70

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 71  --HATGGTGFFDARALAIDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 128

Query: 142 LNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPA 177
             EM+  SP+    +     P  P S  +S P  PA
Sbjct: 129 AAEMEP-SPMPAGPLAF---PAWPWSFFHSCPGLPA 160


>gi|397488848|ref|XP_003815454.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Pan paniscus]
          Length = 300

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 70

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 71  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 128

Query: 142 LNEMD 146
             EM+
Sbjct: 129 AAEME 133


>gi|62006429|gb|AAX60092.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006461|gb|AAX60108.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 110

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 34/137 (24%)

Query: 80  LTVQHLQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           LTV +L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT 
Sbjct: 1   LTVNYL-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTH 58

Query: 134 LMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQ 192
           LM  LG +L +M +       ++D+   P                     V+  D   S+
Sbjct: 59  LMKQLGHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSK 93

Query: 193 YKMYESMPSPKSVWRPW 209
               E +   + VWRPW
Sbjct: 94  SPREEXIHHGEEVWRPW 110


>gi|82216104|sp|Q8UW74.1|HE71A_XENLA RecName: Full=Transcription factor HES-7.1-A; AltName:
           Full=HES-related protein 1-A; Short=XHR1-A; AltName:
           Full=HES-related protein 1-A'; Short=XHR1-A'; AltName:
           Full=Hairy and enhancer of split 7.1-A
 gi|17298167|dbj|BAB78540.1| HES-related 1A [Xenopus laevis]
 gi|213625199|gb|AAI70054.1| Unknown (protein for MGC:196781) [Xenopus laevis]
          Length = 180

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 22/184 (11%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +RK++KP++E++RR RIN  L++L+  +   L++E     K+EKA+ILE TVQ LQ   R
Sbjct: 13  HRKLLKPLVEKRRRERINNSLEKLRIFLFQTLKSEKLKNPKVEKAEILECTVQFLQS--R 70

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSH-LGQRLNEMDKIS 149
           +         D + +++GF  C       + S P ++  +  +L+SH +    +  D  S
Sbjct: 71  KLLPLDREAVDKE-YQSGFQHCLETTLHFMNSKPDMN-GVTKELLSHQMSSCKSPSDAWS 128

Query: 150 ----PLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSV 205
               PL+  V  +     +PH  + S+ ++P     + VD+      +  Y+S       
Sbjct: 129 PNCAPLTKHVPSLSYQDSAPHLVSNSISISPT---KTLVDS------HFTYQSF----KT 175

Query: 206 WRPW 209
           WRPW
Sbjct: 176 WRPW 179


>gi|62006385|gb|AAX60070.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 110

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 34/137 (24%)

Query: 80  LTVQHLQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           LTV +L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT 
Sbjct: 1   LTVNYL-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTX 58

Query: 134 LMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQ 192
           LM  LG +L +M +       ++D+   P                     V+  D   S+
Sbjct: 59  LMKQLGHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSK 93

Query: 193 YKMYESMPSPKSVWRPW 209
               E +   + VWRPW
Sbjct: 94  SPREEDIHHGEEVWRPW 110


>gi|114555682|ref|XP_001171234.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           isoform 1 [Pan troglodytes]
 gi|410328583|gb|JAA33238.1| hairy/enhancer-of-split related with YRPW motif-like [Pan
           troglodytes]
          Length = 328

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|402854038|ref|XP_003891687.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein isoform 2 [Papio anubis]
          Length = 300

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 70

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 71  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 128

Query: 142 LNEMD 146
             EM+
Sbjct: 129 AAEME 133


>gi|426329068|ref|XP_004025566.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Gorilla gorilla gorilla]
          Length = 328

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|322800813|gb|EFZ21689.1| hypothetical protein SINV_14741 [Solenopsis invicta]
          Length = 269

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 13/112 (11%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR--RQQRLA 95
           M +   R  + +C D     M      EGEN+SKLEKADILELTV+HLQK++  R   L+
Sbjct: 1   MFKINNRKFLRKCPDVG---MFDHWDTEGENISKLEKADILELTVRHLQKLQASRPSGLS 57

Query: 96  S-----NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           +     + ++   R+++GF  CA E  + L+S PG       +L  HL   L
Sbjct: 58  AAIASGDEISAESRWQSGFGHCAAEACRFLSSLPG---EAAERLARHLAAGL 106


>gi|402854036|ref|XP_003891686.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein isoform 1 [Papio anubis]
          Length = 328

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|13277378|ref|NP_077789.1| class E basic helix-loop-helix protein 41 isoform 1 [Mus musculus]
 gi|20137437|sp|Q99PV5.1|BHE41_MOUSE RecName: Full=Class E basic helix-loop-helix protein 41;
           Short=bHLHe41; AltName: Full=Class B basic
           helix-loop-helix protein 3; Short=bHLHb3; AltName:
           Full=Differentially expressed in chondrocytes protein 2;
           Short=mDEC2
 gi|12583671|dbj|BAB21503.1| bHLH protein DEC2 [Mus musculus]
 gi|47169767|dbj|BAD18970.1| bHLH transcriptional factor Dec2 [Mus musculus]
 gi|225000338|gb|AAI72625.1| Basic helix-loop-helix family, member e41 [synthetic construct]
 gi|225000424|gb|AAI72727.1| Basic helix-loop-helix family, member e41 [synthetic construct]
          Length = 410

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|109002442|ref|XP_001113370.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Macaca mulatta]
          Length = 328

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|148678751|gb|EDL10698.1| basic helix-loop-helix domain containing, class B3 [Mus musculus]
          Length = 410

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|355557860|gb|EHH14640.1| hypothetical protein EGK_00601 [Macaca mulatta]
 gi|355745176|gb|EHH49801.1| hypothetical protein EGM_00522 [Macaca fascicularis]
 gi|380790479|gb|AFE67115.1| hairy/enhancer-of-split related with YRPW motif-like protein
           [Macaca mulatta]
 gi|384943628|gb|AFI35419.1| hairy/enhancer-of-split related with YRPW motif-like protein
           [Macaca mulatta]
 gi|384943630|gb|AFI35420.1| hairy/enhancer-of-split related with YRPW motif-like protein
           [Macaca mulatta]
          Length = 328

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|344287657|ref|XP_003415569.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif-like protein-like [Loxodonta africana]
          Length = 328

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 13/127 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLRLG---TKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R+     +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAIDFRSIGFRECLTEVIRYLGVLEGPSSRVDPVRIRLLSHLNNY 156

Query: 142 LNEMDKI 148
             EM+ +
Sbjct: 157 AAEMEPL 163


>gi|20137186|sp|O35779.2|BHE41_RAT RecName: Full=Class E basic helix-loop-helix protein 41;
           Short=bHLHe41; AltName: Full=Class B basic
           helix-loop-helix protein 3; Short=bHLHb3; AltName:
           Full=Enhancer-of-split and hairy-related protein 1;
           Short=SHARP-1
          Length = 410

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|73853838|ref|NP_001027504.1| basic helix-loop-helix family, member e41 [Xenopus (Silurana)
           tropicalis]
 gi|66990093|gb|AAH98080.1| basic helix-loop-helix family, member e41 [Xenopus (Silurana)
           tropicalis]
          Length = 427

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+ +     ++ Q
Sbjct: 50  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKGLTSLTEQQHQ 107

Query: 93  RLAS---------NPV-TDADRFRAGFTTCANEVSKCLA 121
           ++ +         +P+ TD D F +GF TCA EV + L+
Sbjct: 108 KIMALQNGEHALKSPIQTDLDAFHSGFQTCAKEVLQYLS 146


>gi|62006541|gb|AAX60148.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 110

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 34/137 (24%)

Query: 80  LTVQHLQKMRRQQRLASNPV------TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           LTV +L K ++QQR+A NP        + D+FRAG+T  A EVS   ++ PG+DL+ GT 
Sbjct: 1   LTVNYL-KAQQQQRVA-NPQXPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTH 58

Query: 134 LMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQ 192
           LM  LG +L +M +       ++D+   P                     V+  D   S+
Sbjct: 59  LMKQLGHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSK 93

Query: 193 YKMYESMPSPKSVWRPW 209
               E +   + VWRPW
Sbjct: 94  SPREEDIHHGEEVWRPW 110


>gi|348553002|ref|XP_003462316.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Cavia porcellus]
          Length = 328

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRHLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFLDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|403292051|ref|XP_003937071.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Saimiri boliviensis boliviensis]
          Length = 328

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|335288344|ref|XP_003355589.1| PREDICTED: class E basic helix-loop-helix protein 41 [Sus scrofa]
          Length = 482

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLA 147


>gi|358332139|dbj|GAA43251.2| hairy/enhancer-of-split related with YRPW motif-like protein,
           partial [Clonorchis sinensis]
          Length = 497

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 5/118 (4%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L +LK L+    +  G   SKLEKA+IL+ TV  + ++  +
Sbjct: 32  RKRRRGVIEKRRRDRINCSLYDLKKLIPDVSRKPGS--SKLEKAEILQSTVDFIHRLYSE 89

Query: 92  QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQRLNEMD 146
             + S+ V   +  RAGF  C  EV++ L++  G +++   L   L++HL Q  N+ D
Sbjct: 90  GHVLSSEVRAVELRRAGFKECLLEVTRVLSTFEGSNVQCEELRRTLLTHLHQYDNQKD 147


>gi|148230172|ref|NP_001079464.1| Transcription factor HES-5-like [Xenopus laevis]
 gi|28175821|gb|AAH43639.1| MGC53782 protein [Xenopus laevis]
          Length = 154

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 5/106 (4%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+      +  NV KLEKADILE+ V +LQK + Q 
Sbjct: 18  KLRKPIVEKMRRDRINNSIEQLKVLLEKEFHKQEPNV-KLEKADILEMAVNYLQKQKSQ- 75

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
             + N       ++ GF++C  E  + L   P        KL++HL
Sbjct: 76  --SPNLAKLEQDYKQGFSSCLREAVQFLCYYPESG-ETQMKLLNHL 118


>gi|395853066|ref|XP_003799041.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Otolemur garnettii]
          Length = 328

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALALDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|426226943|ref|XP_004007592.1| PREDICTED: class E basic helix-loop-helix protein 41 [Ovis aries]
          Length = 287

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLA 147


>gi|62006459|gb|AAX60107.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006485|gb|AAX60120.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 110

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 8/72 (11%)

Query: 80  LTVQHLQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           LTV +L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT 
Sbjct: 1   LTVNYL-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTH 58

Query: 134 LMSHLGQRLNEM 145
           LM  LG +L +M
Sbjct: 59  LMKQLGHQLKDM 70


>gi|149694643|ref|XP_001498506.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Equus caballus]
          Length = 327

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 41  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 97

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 98  --HATGGTGFFDARALAIDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 155

Query: 142 LNEMD 146
             EM+
Sbjct: 156 AAEME 160


>gi|73976873|ref|XP_849702.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           [Canis lupus familiaris]
          Length = 326

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|62006523|gb|AAX60139.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 110

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 8/72 (11%)

Query: 80  LTVQHLQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           LTV +L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT 
Sbjct: 1   LTVNYL-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTX 58

Query: 134 LMSHLGQRLNEM 145
           LM  LG +L +M
Sbjct: 59  LMKQLGHQLKDM 70


>gi|113205536|ref|NP_001037880.1| hairy and enhancer of split 5, gene 1 [Xenopus (Silurana)
           tropicalis]
 gi|89267919|emb|CAJ82420.1| Helix-loop-helix DNA-binding domain protein with Hairy Orange
           domain, similar to hes5 [Xenopus (Silurana) tropicalis]
          Length = 154

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 44/179 (24%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+      +  NV KLEKADILE+ V +LQ+ + Q 
Sbjct: 18  KLRKPIVEKMRRDRINNSIEQLKALLEKEFHKQEPNV-KLEKADILEMAVSYLQQQKSQ- 75

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG--QRLNEMDKISP 150
             + N       ++ GF++C  E  + L   P        KL+ HL   Q+L+    ++P
Sbjct: 76  --SPNLAKLEQDYKQGFSSCLREAVQFLCYYPESG-ETQMKLLKHLQAPQKLS----VAP 128

Query: 151 LSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           L                 TY     P+ S S Q                 +P  +WRPW
Sbjct: 129 L-----------------TY----IPSVSDSKQAALAS------------NPSKIWRPW 154


>gi|355694541|gb|AER99705.1| hairy/enhancer-of-split related with YRPW motif-like protein
           [Mustela putorius furo]
          Length = 327

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|405968113|gb|EKC33213.1| Protein deadpan [Crassostrea gigas]
          Length = 293

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 45/61 (73%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
          +K  KP+ ER+RR RIN+CL +LK++++ A   + +  +K+EKADILE+T+ HL +M +Q
Sbjct: 4  KKANKPVTERRRRDRINKCLVQLKNIVMRATGKDEKRFAKMEKADILEMTIGHLIEMHQQ 63

Query: 92 Q 92
           
Sbjct: 64 N 64


>gi|392347766|ref|XP_002729500.2| PREDICTED: LOW QUALITY PROTEIN: class E basic helix-loop-helix
           protein 41 [Rattus norvegicus]
          Length = 392

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|345319890|ref|XP_001515594.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Ornithorhynchus anatinus]
          Length = 319

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 17/136 (12%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA+IL++TV HL+ + 
Sbjct: 41  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEILQMTVDHLKML- 97

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHLGQ 140
                      DA     D    GF  C  EV + L    G      +R+  +L+SHL  
Sbjct: 98  --HATGGTGFFDARALAVDYRSIGFRECLTEVVRYLGILEGQSSADPIRI--RLLSHLNN 153

Query: 141 RLNEMDKISPLSVRVM 156
            ++EM+  SP++  ++
Sbjct: 154 YVSEMEP-SPVAAALL 168


>gi|197102176|ref|NP_001125722.1| class E basic helix-loop-helix protein 40 [Pongo abelii]
 gi|75061860|sp|Q5RAI7.1|BHE40_PONAB RecName: Full=Class E basic helix-loop-helix protein 40;
           Short=bHLHe40; AltName: Full=Class B basic
           helix-loop-helix protein 2; Short=bHLHb2
 gi|55728970|emb|CAH91223.1| hypothetical protein [Pongo abelii]
          Length = 412

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 26/152 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N  T  + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM------DKISPLSVRVMDVCTPPPSP 165
           + ++E+       K S  + +VMD    P SP
Sbjct: 177 RVVSELLQGGTSRKSSDPAPKVMDFKEKPSSP 208


>gi|61555623|gb|AAX46736.1| hairy/enhancer-of-split related with YRPW motif-like [Bos taurus]
          Length = 299

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 70

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 71  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 128

Query: 142 LNEMD 146
             EM+
Sbjct: 129 AAEME 133


>gi|350585910|ref|XP_003127874.3| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein-like [Sus scrofa]
          Length = 328

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRTDPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|148227417|ref|NP_001082175.1| transcription factor HES-7.1-B [Xenopus laevis]
 gi|82216102|sp|Q8UW72.1|HE71B_XENLA RecName: Full=Transcription factor HES-7.1-B; AltName:
           Full=HES-related protein 1-B; Short=XHR1-B; AltName:
           Full=Hairy and enhancer of split 7.1-B
 gi|17298171|dbj|BAB78542.1| HES-related 1B [Xenopus laevis]
          Length = 180

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 22/184 (11%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +RK++KP++E++RR RIN  L++L+  +   L++E     K+EKA+ILE TVQ LQ   R
Sbjct: 13  HRKLLKPLVEKRRRERINNSLEKLRIFLSQTLKSEKLKNPKVEKAEILECTVQFLQS--R 70

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISP 150
           +         D + +++GF  C       + S P ++  +  +L+SH      +M    P
Sbjct: 71  KLLPLDREAVDKE-YQSGFQHCLETTLHFMNSKPDMN-GVTKELLSH------QMSSCKP 122

Query: 151 LSVRVMDVCTP-----PPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSV 205
            S      C P     P   + D+    ++ + S S      D    Y+ +++       
Sbjct: 123 PSDAWSPTCAPLTKHVPSLSYQDSTPHLVSNSISISPTKTLVDSHFTYQTFKT------- 175

Query: 206 WRPW 209
           WRPW
Sbjct: 176 WRPW 179


>gi|440913529|gb|ELR62977.1| Hairy/enhancer-of-split related with YRPW motif-like protein,
           partial [Bos grunniens mutus]
          Length = 302

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 16  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 72

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 73  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 130

Query: 142 LNEMD 146
             EM+
Sbjct: 131 AAEME 135


>gi|345308121|ref|XP_001507326.2| PREDICTED: class E basic helix-loop-helix protein 40-like
           [Ornithorhynchus anatinus]
          Length = 412

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 22/127 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIEQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTP-GIDLRLGTKLMSHL 138
           ++ +             N     + FR+GF TCA EV + LA    G DL+  + L++HL
Sbjct: 117 KIIALQNGLQAGELSSRNLEAGQEMFRSGFQTCAREVLQYLAKHENGRDLK-SSPLVNHL 175

Query: 139 GQRLNEM 145
            + ++E+
Sbjct: 176 HRMVSEV 182


>gi|127801839|gb|AAI11206.2| HEYL protein [Bos taurus]
          Length = 300

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 70

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 71  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 128

Query: 142 LNEMD 146
             EM+
Sbjct: 129 AAEME 133


>gi|164451498|ref|NP_001019736.2| hairy/enhancer-of-split related with YRPW motif-like protein [Bos
           taurus]
 gi|296488912|tpg|DAA31025.1| TPA: hairy/enhancer-of-split related with YRPW motif-like protein
           [Bos taurus]
          Length = 329

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 43  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 99

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 100 --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 157

Query: 142 LNEMD 146
             EM+
Sbjct: 158 AAEME 162


>gi|432864673|ref|XP_004070403.1| PREDICTED: transcription factor HES-2-like [Oryzias latipes]
          Length = 199

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 19/186 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           + RK MKP++E++RRARIN  L+ LK+L++     +    SKLEKADILE+TV+ L+ + 
Sbjct: 27  ELRKTMKPLMEKRRRARINDSLNLLKNLILPLTGKDKTRYSKLEKADILEMTVRFLRDIP 86

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKIS 149
                  N    A  +  G+  C   VS  L   P I L          GQ  + + K  
Sbjct: 87  -----LVNTKNPAHSYGEGYKACLQRVSAVL---PQIKLN-----QEAFGQVNDFVQKSM 133

Query: 150 PLSV--RVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ----YKMYESMPSPK 203
           P  V    ++ C    +   + +       SS +S++++    S      ++  S     
Sbjct: 134 PAVVTPTCLNCCAQRSTTFPEIHQRLQRLKSSFNSRLESPPRNSAAAGPIRVQLSAQPLG 193

Query: 204 SVWRPW 209
           SVWRPW
Sbjct: 194 SVWRPW 199


>gi|13926076|gb|AAK49525.1| bHLH transcription factor DEC1 [Homo sapiens]
          Length = 409

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 26/152 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 113

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N  T  + F +GF TCA EV + LA          ++L++HL 
Sbjct: 114 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 173

Query: 140 QRLNEM------DKISPLSVRVMDVCTPPPSP 165
           + ++E+       K S  + +VMD    P SP
Sbjct: 174 RVVSELLQGGTSRKPSDPAPKVMDFKEKPSSP 205


>gi|73956758|ref|XP_546749.2| PREDICTED: transcription factor HES-3 [Canis lupus familiaris]
          Length = 200

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 85/190 (44%), Gaps = 18/190 (9%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +RK+ KP++E+KRRARIN  L++LK L+      +     KLEKADILEL+V++++ ++ 
Sbjct: 18  FRKISKPLMEKKRRARINVSLEQLKSLLEKHYSHQ-IRKRKLEKADILELSVKYMKSLQN 76

Query: 91  Q-QRLASNPVTDADRFRAGFTTCANEVSKCLAST---------PGIDLRLGTKLMSHLGQ 140
             Q L   PV     F +GF +    VS+ L            P    R G   M   G+
Sbjct: 77  SVQGLW--PVPGGVEFPSGFRSGLPGVSQLLRRGEEGGGGLRCPLAHERAGGSTMDSAGR 134

Query: 141 RLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPAS-SGSSQVDTCDYTSQYKMYESM 199
                +  +PL      +  P P P      + L P    G S        +  +  ES 
Sbjct: 135 ---SPEAAAPLGPCAPALWGPAPVPGGSGPRL-LFPGDLPGPSSSVPGPQPAPRQCTESP 190

Query: 200 PSPKSVWRPW 209
              + VWRPW
Sbjct: 191 GPGRGVWRPW 200


>gi|122145993|sp|Q2NL18.3|HEYL_BOVIN RecName: Full=Hairy/enhancer-of-split related with YRPW motif-like
           protein
          Length = 328

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|4503299|ref|NP_003661.1| class E basic helix-loop-helix protein 40 [Homo sapiens]
 gi|332815975|ref|XP_516248.3| PREDICTED: LOW QUALITY PROTEIN: class E basic helix-loop-helix
           protein 40 [Pan troglodytes]
 gi|426339255|ref|XP_004033573.1| PREDICTED: class E basic helix-loop-helix protein 40 [Gorilla
           gorilla gorilla]
 gi|20137254|sp|O14503.1|BHE40_HUMAN RecName: Full=Class E basic helix-loop-helix protein 40;
           Short=bHLHe40; AltName: Full=Class B basic
           helix-loop-helix protein 2; Short=bHLHb2; AltName:
           Full=Differentially expressed in chondrocytes protein 1;
           Short=DEC1; AltName: Full=Enhancer-of-split and
           hairy-related protein 2; Short=SHARP-2; AltName:
           Full=Stimulated by retinoic acid gene 13 protein
 gi|2308997|dbj|BAA21720.1| DEC1 [Homo sapiens]
 gi|11414986|dbj|BAB18565.1| bHLH transcriptional factor DEC1 [Homo sapiens]
 gi|48145959|emb|CAG33202.1| BHLHB2 [Homo sapiens]
 gi|51895973|gb|AAH82238.1| Basic helix-loop-helix family, member e40 [Homo sapiens]
 gi|119584320|gb|EAW63916.1| basic helix-loop-helix domain containing, class B, 2, isoform CRA_a
           [Homo sapiens]
 gi|119584321|gb|EAW63917.1| basic helix-loop-helix domain containing, class B, 2, isoform CRA_a
           [Homo sapiens]
 gi|121646998|gb|ABM64206.1| basic helix-loop-helix domain-containing [Homo sapiens]
 gi|167773525|gb|ABZ92197.1| basic helix-loop-helix domain containing, class B, 2 [synthetic
           construct]
 gi|189065571|dbj|BAG35410.1| unnamed protein product [Homo sapiens]
 gi|208965854|dbj|BAG72941.1| basic helix-loop-helix domain containing, class B, 2 [synthetic
           construct]
 gi|410226650|gb|JAA10544.1| basic helix-loop-helix family, member e40 [Pan troglodytes]
 gi|410262350|gb|JAA19141.1| basic helix-loop-helix family, member e40 [Pan troglodytes]
 gi|410262352|gb|JAA19142.1| basic helix-loop-helix family, member e40 [Pan troglodytes]
 gi|410262354|gb|JAA19143.1| basic helix-loop-helix family, member e40 [Pan troglodytes]
 gi|410294214|gb|JAA25707.1| basic helix-loop-helix family, member e40 [Pan troglodytes]
 gi|410339063|gb|JAA38478.1| basic helix-loop-helix family, member e40 [Pan troglodytes]
 gi|410339065|gb|JAA38479.1| basic helix-loop-helix family, member e40 [Pan troglodytes]
          Length = 412

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 26/152 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N  T  + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM------DKISPLSVRVMDVCTPPPSP 165
           + ++E+       K S  + +VMD    P SP
Sbjct: 177 RVVSELLQGGTSRKPSDPAPKVMDFKEKPSSP 208


>gi|405965296|gb|EKC30678.1| Transcription factor HES-1-B [Crassostrea gigas]
          Length = 241

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 54/74 (72%), Gaps = 4/74 (5%)

Query: 68  NVSKLEKADILELTVQHLQKMRRQQ---RLASNPVTDADRFRAGFTTCANEVSKCLASTP 124
           + SKLEKADILE+TV++L+ ++R+Q    +A++P T A ++  GFT CA+EV++ L ++ 
Sbjct: 23  HYSKLEKADILEMTVKYLRSLQRRQMTSAVAADP-TVAAKYSMGFTECASEVARYLGNSQ 81

Query: 125 GIDLRLGTKLMSHL 138
           GI+  +  +L+ HL
Sbjct: 82  GINDEVRGRLLGHL 95


>gi|383873182|ref|NP_001244447.1| class E basic helix-loop-helix protein 40 [Macaca mulatta]
 gi|402859528|ref|XP_003894207.1| PREDICTED: class E basic helix-loop-helix protein 40 isoform 1
           [Papio anubis]
 gi|402859530|ref|XP_003894208.1| PREDICTED: class E basic helix-loop-helix protein 40 isoform 2
           [Papio anubis]
 gi|355559488|gb|EHH16216.1| Class E basic helix-loop-helix protein 40 [Macaca mulatta]
 gi|380817464|gb|AFE80606.1| class E basic helix-loop-helix protein 40 [Macaca mulatta]
 gi|383422375|gb|AFH34401.1| class E basic helix-loop-helix protein 40 [Macaca mulatta]
          Length = 412

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 26/152 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N  T  + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM------DKISPLSVRVMDVCTPPPSP 165
           + ++E+       K S  + +VMD    P SP
Sbjct: 177 RVVSELLQGGTSRKPSDPAPKVMDFKEKPSSP 208


>gi|355746556|gb|EHH51170.1| Class E basic helix-loop-helix protein 40 [Macaca fascicularis]
          Length = 425

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 26/152 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 72  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 129

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N  T  + F +GF TCA EV + LA          ++L++HL 
Sbjct: 130 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 189

Query: 140 QRLNEM------DKISPLSVRVMDVCTPPPSP 165
           + ++E+       K S  + +VMD    P SP
Sbjct: 190 RVVSELLQGGTSRKPSDPAPKVMDFKEKPSSP 221


>gi|308481151|ref|XP_003102781.1| hypothetical protein CRE_30023 [Caenorhabditis remanei]
 gi|308260867|gb|EFP04820.1| hypothetical protein CRE_30023 [Caenorhabditis remanei]
          Length = 174

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 45/68 (66%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++E+KRRARIN+ L +LK +++          +K EKADILE+TV++L +MR  Q   
Sbjct: 26  KPLMEKKRRARINKSLSQLKQILIQDGHKNSAQHAKWEKADILEMTVEYLHQMRSSQACL 85

Query: 96  SNPVTDAD 103
            +P T ++
Sbjct: 86  PSPSTSSN 93


>gi|426215232|ref|XP_004001878.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Ovis aries]
          Length = 329

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 43  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 99

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 100 --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 157

Query: 142 LNEMD 146
             EM+
Sbjct: 158 AAEME 162


>gi|444706909|gb|ELW48226.1| Hairy/enhancer-of-split related with YRPW motif-like protein
           [Tupaia chinensis]
          Length = 299

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L+LTV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQLTVDHLKML- 70

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                    + DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 71  --HATGGTGLFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSNRADPVRIRLLSHLNSY 128

Query: 142 LNEMD 146
             EM+
Sbjct: 129 AAEME 133


>gi|326932317|ref|XP_003212266.1| PREDICTED: transcription factor HES-5-like [Meleagris gallopavo]
          Length = 153

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 8/106 (7%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+TV +L    +QQ
Sbjct: 21  KLRKPVVEKMRRDRINSSIEQLKVLLEKEFQRHQPN-SKLEKADILEMTVSYL----KQQ 75

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           R + +  +  D FR G++ C  E    L S   +     TKL+SH 
Sbjct: 76  R-SFHKSSQFD-FREGYSRCLQEAFHFL-SLHKVRTETQTKLLSHF 118


>gi|296207574|ref|XP_002750687.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Callithrix jacchus]
          Length = 328

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK    ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRSGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 156

Query: 142 LNEMD 146
             EM+
Sbjct: 157 AAEME 161


>gi|223648012|gb|ACN10764.1| Class B basic helix-loop-helix protein 2 [Salmo salar]
          Length = 398

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 18/132 (13%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALSNLLEQQQQ 113

Query: 93  RLASNPVTDADR---------FRAGFTTCANEVSKCLASTPGI-DLRLGTKLMSHLGQRL 142
           ++ +  ++D            FR+GF  CA EV + LA+     D    ++++SHL +  
Sbjct: 114 KIIALQISDQSSVSSENSEEMFRSGFHVCAKEVLQYLANQGSSRDHLTPSEMISHLHKVA 173

Query: 143 NEMDKISPLSVR 154
           +E+ +  P S R
Sbjct: 174 SEVLQ-GPFSPR 184


>gi|126340326|ref|XP_001362584.1| PREDICTED: class E basic helix-loop-helix protein 41-like
           [Monodelphis domestica]
          Length = 501

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+  D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSMKSPIQADLDSFHSGFQTCAKEVMQYLS 147


>gi|47222267|emb|CAG11146.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 374

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 16/124 (12%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASN 97
           ++E++RR RIN CL EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +         
Sbjct: 109 IIEKRRRDRINNCLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML---HAAGGK 163

Query: 98  PVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHLGQRLNEMDKI 148
              DA     D    GF  C  E ++ L+   G+D    LRL  +L+SHL    ++ +  
Sbjct: 164 GYFDAHALAMDYRGLGFRECLAETARYLSIIEGLDGADPLRL--RLVSHLNSYASQREAH 221

Query: 149 SPLS 152
           S LS
Sbjct: 222 SGLS 225


>gi|149048972|gb|EDM01426.1| rCG30102 [Rattus norvegicus]
          Length = 299

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|148682985|gb|EDL14932.1| hairy and enhancer of split 3 (Drosophila) [Mus musculus]
          Length = 200

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 14/188 (7%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +RK+ KP++E+KRRARIN  L++L+ L+      +     KLEKADILEL+V++++ ++ 
Sbjct: 18  FRKISKPLMEKKRRARINVSLEQLRSLLERHYSHQIRK-RKLEKADILELSVKYMRSLQN 76

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPG-IDLRLGTKLMSHLGQRLNEMDKIS 149
             +    PV     + +GF      VS+ L    G   LR    L    G   +  D  +
Sbjct: 77  SLQ-GLWPVPSGVDYPSGFQGGLRGVSQRLRPGEGDSGLRCPLLLQRREG---STTDSAN 132

Query: 150 PLSVRVMDVCTP---PPS-----PHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           P +  V++ C P    PS      HS    +PL      SS      + +     ES   
Sbjct: 133 PQATSVLNPCLPAIWAPSRAAGGSHSPQSPLPLPGGLLESSTDVVAPHPASNCQAESTRP 192

Query: 202 PKSVWRPW 209
              VWRPW
Sbjct: 193 GFRVWRPW 200


>gi|392340268|ref|XP_001074956.3| PREDICTED: class E basic helix-loop-helix protein 41 [Rattus
           norvegicus]
          Length = 312

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|62006551|gb|AAX60153.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 109

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 34/136 (25%)

Query: 81  TVQHLQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
           TV +L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT L
Sbjct: 1   TVNYL-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHL 58

Query: 135 MSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQY 193
           M  LG +L +M +       ++D+   P                     V+  D   S+ 
Sbjct: 59  MKQLGHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKS 93

Query: 194 KMYESMPSPKSVWRPW 209
              E +   + VWRPW
Sbjct: 94  PREEDIHHGEEVWRPW 109


>gi|410966960|ref|XP_003989992.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Felis catus]
          Length = 344

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ +A + +G   SKLEKA++L++TV HL+ + 
Sbjct: 58  QARKKRRGIIEKRRRDRINSSLSELRRLVPSAFEKQGS--SKLEKAEVLQMTVDHLKML- 114

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGIDLR---LGTKLMSHLGQR 141
                      DA      FR+ GF  C  EV + L    G   R   +  +L+SHL   
Sbjct: 115 --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSY 172

Query: 142 LNEMD 146
             EM+
Sbjct: 173 AAEME 177


>gi|224079770|ref|XP_002196748.1| PREDICTED: transcription factor HES-5-like isoform 1 [Taeniopygia
           guttata]
          Length = 161

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+TV +L++  + Q
Sbjct: 21  KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEMTVSYLKQQSQLQ 79

Query: 93  RLASNPVTDADR--FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
              +     + +  FR G++ C  E    L S   +     TKL+SH 
Sbjct: 80  MKTAGSFHKSSQFDFREGYSRCLQEAFYFL-SLHKVRTETQTKLLSHF 126


>gi|126321015|ref|XP_001367383.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Monodelphis domestica]
          Length = 309

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HSAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDTSDPLRVRLVSHL 158


>gi|14488036|gb|AAK63839.1|AF383157_1 enhancer of split related 1 [Xenopus laevis]
          Length = 154

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 5/106 (4%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+      +  NV KLEKADILE+ V +LQ+ + Q 
Sbjct: 18  KLRKPIVEKMRRDRINNSIEQLKVLLEKEFHKQEPNV-KLEKADILEMAVNYLQQQKSQ- 75

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
             + N       ++ GF++C  E  + L   P        KL++HL
Sbjct: 76  --SPNLAKLEQDYKQGFSSCLREAVQFLCYYPESG-ETQMKLLNHL 118


>gi|166158282|ref|NP_001107508.1| uncharacterized protein LOC100135364 [Xenopus (Silurana)
           tropicalis]
 gi|163915799|gb|AAI57671.1| LOC100135364 protein [Xenopus (Silurana) tropicalis]
 gi|213625699|gb|AAI71149.1| hypothetical protein LOC100135364 [Xenopus (Silurana) tropicalis]
 gi|213627344|gb|AAI71151.1| hypothetical protein LOC100135364 [Xenopus (Silurana) tropicalis]
          Length = 205

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 3/121 (2%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S T+  RK++KP++E++RR RINR L+E++ L++     +     K+EKA+ILEL V ++
Sbjct: 7   SDTFPSRKILKPVVEKQRRDRINRSLEEMRVLLLKLTGNQKLQNPKMEKAEILELAVIYI 66

Query: 86  QKMRRQQ-RLASNPVTDADR-FRAGFTTCANEVSKCLAS-TPGIDLRLGTKLMSHLGQRL 142
           + +   +   AS  V+ A++ + +GF  C +     ++  +P         L +HL QRL
Sbjct: 67  RNVTHMKTHDASQWVSPAEKLYLSGFRECLDRTEDFISEISPKARAVFLDNLQTHLQQRL 126

Query: 143 N 143
           +
Sbjct: 127 H 127


>gi|395510955|ref|XP_003759731.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 isoform 1 [Sarcophilus harrisii]
          Length = 309

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HSAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDTSDPLRVRLVSHL 158


>gi|363895780|gb|AEW42999.1| Hl3 [Nematostella vectensis]
          Length = 318

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 90/198 (45%), Gaps = 34/198 (17%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTAL-----QAEGENVSKLEKADILELTVQHLQ- 86
           K  KP+LER+RRARIN  L+ELK L++++L     QAE +N  K+EKA+ILELTV  L+ 
Sbjct: 134 KSSKPLLERQRRARINHSLNELKTLVLSSLYQNCPQAE-QNCEKMEKAEILELTVNFLKV 192

Query: 87  -KMRRQQRLASNPVTDADRFR-----AGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
            + RR   +    +  A+ F            AN     + ST  +   L  +     GQ
Sbjct: 193 IQSRRNTVMPRPDLEKANEFHHVKMEQMSPEQANARQHPVCSTSQLSKPLCCQ-GCRPGQ 251

Query: 141 RLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASS---------GSSQVDTCDYTS 191
           R+ E             V   PPS +S   +  L  A +          SS V+      
Sbjct: 252 RVCE-----------PYVVAAPPSMYSVAXTRKLPVAVNPHHVPEYQLASSHVEKSSQAQ 300

Query: 192 QYKMYESMPSPKSVWRPW 209
           +  +Y  + +P  VWRPW
Sbjct: 301 RSAIYTHVSAPSKVWRPW 318


>gi|351708546|gb|EHB11465.1| Class E basic helix-loop-helix protein 41, partial [Heterocephalus
           glaber]
          Length = 225

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLA 147


>gi|332232570|ref|XP_003265479.1| PREDICTED: class E basic helix-loop-helix protein 41 [Nomascus
           leucogenys]
          Length = 394

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|344236475|gb|EGV92578.1| Hairy/enhancer-of-split related with YRPW motif-like protein
           [Cricetulus griseus]
          Length = 300

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 32/183 (17%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 14  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLH 71

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGID-----LRLGTKLMSHLG 139
                      DA      FR+ GF  C  EV + L    G       +R+  +L+SHL 
Sbjct: 72  AS---GGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSHADPVRI--RLLSHLN 126

Query: 140 QRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESM 199
               EM+              P P+P +   + P+ P S   S       +SQ  +   +
Sbjct: 127 SYAAEME--------------PSPTP-TGALAFPVWPWSFLHSCPGWPSLSSQLAILGRV 171

Query: 200 PSP 202
           P P
Sbjct: 172 PGP 174


>gi|449268514|gb|EMC79378.1| Transcription factor HES-5 [Columba livia]
          Length = 161

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+TV +L++  + Q
Sbjct: 21  KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEMTVSYLKQQSQLQ 79

Query: 93  RLASNPVTDADR--FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
              +     + +  FR G++ C  E    L S   +     TKL+SH 
Sbjct: 80  VKTAGSFHKSSQFDFREGYSRCLQEAFHFL-SLHKVRTETQTKLLSHF 126


>gi|348513201|ref|XP_003444131.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Oreochromis niloticus]
          Length = 331

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 16/146 (10%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ + 
Sbjct: 47  QARKRRRGIIEKRRRDRINNSLSELRRLVPSAYEKQGS--AKLEKAEILQMTVDHLKML- 103

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHLGQ 140
                      DA     D    GF  C  E ++ L+   G+D    LR+  +L+SHL  
Sbjct: 104 --HAAGGKGYFDAHALAMDYRGLGFRECLAETARYLSIIEGLDSADPLRI--RLVSHLNN 159

Query: 141 RLNEMDKISPLSVRVMDVCTPPPSPH 166
             ++ +  S LS          P+ H
Sbjct: 160 YASQREAHSGLSHLAWGSAFASPAAH 185


>gi|291399623|ref|XP_002716185.1| PREDICTED: hairy and enhancer of split 3 [Oryctolagus cuniculus]
          Length = 153

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +RK+ KP++E+KRRARIN  L++LK L+      +     KLEKADILEL+V++++ ++ 
Sbjct: 18  FRKISKPLMEKKRRARINVSLEQLKSLLEKHYSHQIRK-RKLEKADILELSVKYMKSLQS 76

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVS 117
             +    P + A  +  GF +C   VS
Sbjct: 77  SLQ-GLWPASSAAEYPLGFRSCLPGVS 102


>gi|19684064|gb|AAH25968.1| Basic helix-loop-helix family, member e41 [Homo sapiens]
 gi|55669468|gb|AAV54602.1| basic helix-loop-helix protein 3 isoform 1 [Homo sapiens]
          Length = 482

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|13540521|ref|NP_110389.1| class E basic helix-loop-helix protein 41 [Homo sapiens]
 gi|114645583|ref|XP_520805.2| PREDICTED: class E basic helix-loop-helix protein 41 [Pan
           troglodytes]
 gi|20137459|sp|Q9C0J9.1|BHE41_HUMAN RecName: Full=Class E basic helix-loop-helix protein 41;
           Short=bHLHe41; AltName: Full=Class B basic
           helix-loop-helix protein 3; Short=bHLHb3; AltName:
           Full=Differentially expressed in chondrocytes protein 2;
           Short=hDEC2; AltName: Full=Enhancer-of-split and
           hairy-related protein 1; Short=SHARP-1
 gi|12583669|dbj|BAB21502.1| bHLH protein DEC2 [Homo sapiens]
 gi|119616933|gb|EAW96527.1| basic helix-loop-helix domain containing, class B, 3, isoform CRA_a
           [Homo sapiens]
 gi|119616934|gb|EAW96528.1| basic helix-loop-helix domain containing, class B, 3, isoform CRA_a
           [Homo sapiens]
 gi|121647001|gb|ABM64207.1| basic helix-loop-helix domain-containing [Homo sapiens]
          Length = 482

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|2267587|gb|AAB63586.1| enhancer-of-split and hairy-related protein 1 [Rattus norvegicus]
          Length = 253

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|339237527|ref|XP_003380318.1| protein deadpan [Trichinella spiralis]
 gi|316976868|gb|EFV60066.1| protein deadpan [Trichinella spiralis]
          Length = 106

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 42/56 (75%)

Query: 36 KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
          KP++E++RRARINR LDELK +++ + +      SK EKADILE+TVQ ++ +R Q
Sbjct: 30 KPLMEKRRRARINRSLDELKSMLICSTKPSIPGHSKWEKADILEMTVQQMRTLRTQ 85


>gi|115495251|ref|NP_001069765.1| class E basic helix-loop-helix protein 41 [Bos taurus]
 gi|111307015|gb|AAI20014.1| Basic helix-loop-helix family, member e41 [Bos taurus]
          Length = 374

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLA 147


>gi|402885507|ref|XP_003906196.1| PREDICTED: class E basic helix-loop-helix protein 41 [Papio anubis]
          Length = 479

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|405968112|gb|EKC33212.1| Protein deadpan [Crassostrea gigas]
          Length = 319

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 45/60 (75%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
          +K  KP+ E++RR RIN+CL +LK++++ A   + +  +K+EKADILE+T+ HL +M +Q
Sbjct: 30 KKASKPVTEKRRRDRINKCLVQLKNIVMRATGKDEKRFAKMEKADILEMTIGHLIEMHQQ 89


>gi|431906386|gb|ELK10583.1| Transcription factor HES-3 [Pteropus alecto]
          Length = 202

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 7/98 (7%)

Query: 24  PISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQ 83
           P SR   +RK+ KP++E+KRRARIN  L++LK L+      +     KLEKADILEL+V+
Sbjct: 14  PASR---FRKISKPLMEKKRRARINVSLEQLKSLLEKHYSHQ-IRKRKLEKADILELSVK 69

Query: 84  HLQKMRRQ-QRLASNPVTDADRFRAGFTTCANEVSKCL 120
           +++ ++   Q L   PV     + +GF  C + V + L
Sbjct: 70  YMKSLQNSVQGLW--PVPSGAEYPSGFGGCLSGVRQLL 105


>gi|402590782|gb|EJW84712.1| hypothetical protein WUBG_04375, partial [Wuchereria bancrofti]
          Length = 80

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 3/58 (5%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
          RK+ KP++E++RRAR+N CLD+LK L+   L     + +KLEKADILE+TV +L +M+
Sbjct: 17 RKLKKPLMEKRRRARMNECLDQLKHLL---LHISPNHRTKLEKADILEMTVAYLNQMQ 71


>gi|327269642|ref|XP_003219602.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like isoform 1 [Anolis carolinensis]
          Length = 305

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 51  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 105

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 106 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDTADPLRVRLVSHLNNYASQ 165

Query: 145 MDKIS 149
            +  S
Sbjct: 166 REAAS 170


>gi|296487306|tpg|DAA29419.1| TPA: basic helix-loop-helix domain containing, class B, 3 [Bos
           taurus]
          Length = 374

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLA 147


>gi|426240363|ref|XP_004014078.1| PREDICTED: transcription factor HES-3 [Ovis aries]
          Length = 160

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 4/100 (4%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S T  +RKV KP++E+KRRARIN  L++LK L+      +     KLEKADILEL+V+++
Sbjct: 13  SPTGNFRKVSKPLMEKKRRARINVSLEQLKSLLEKHYSHQIRK-RKLEKADILELSVKYM 71

Query: 86  QKMRRQ-QRLASNPVTDADRFRAGFTTCANEVSKCLASTP 124
           + ++   Q L   PV     + +GF      VS+     P
Sbjct: 72  KSLQNSVQGLW--PVPSGAEYPSGFPRPLPGVSQLXXWAP 109


>gi|348510259|ref|XP_003442663.1| PREDICTED: class E basic helix-loop-helix protein 40-like isoform 2
           [Oreochromis niloticus]
          Length = 407

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 15/98 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALSSLLEQQQQ 113

Query: 93  RLAS--------NPVTDADRFRAGFTTCANEVSKCLAS 122
           ++ +        N  +  + FR+GF  CA EV   +AS
Sbjct: 114 KIIALQKDLQLGNAESSEEMFRSGFHLCAKEVLHYMAS 151


>gi|62006499|gb|AAX60127.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 105

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 33/130 (25%)

Query: 87  KMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG 
Sbjct: 2   KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGH 60

Query: 141 RLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESM 199
           +L +M +       ++D+   P                     V+  D   S+    E +
Sbjct: 61  QLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKSPREEDI 95

Query: 200 PSPKSVWRPW 209
              + VWRPW
Sbjct: 96  HHGEEVWRPW 105


>gi|27370687|gb|AAH37742.1| Bhlhe41 protein [Mus musculus]
          Length = 193

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|51012517|gb|AAT92565.1| hairy [Coboldia fuscipes]
          Length = 253

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 13/117 (11%)

Query: 57  LMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRL---ASNPVTDADRFRAGFTTCA 113
           L++ A + +    SKLEKADILE TV++LQ ++RQQ +   A+NP    ++F+AG+  C 
Sbjct: 2   LILDATKKDPARHSKLEKADILEKTVKYLQDLQRQQSIISQAANPKV-LNKFKAGYMECV 60

Query: 114 NEVSKCLASTPGIDLRLGTKLMSHLGQRLN-EMDK--ISPLSVRVM--DVCTPPPSP 165
           N+V +     PG++  +   L+ HL   +  E D   + P+S+R++     +PP SP
Sbjct: 61  NQVERF----PGLEPDIRRCLVQHLTSSMKMETDHQPMQPVSIRLLPQSYESPPSSP 113


>gi|354485853|ref|XP_003505096.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif-like protein-like [Cricetulus griseus]
          Length = 328

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 17/127 (13%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLH 99

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGID-----LRLGTKLMSHLG 139
                      DA      FR+ GF  C  EV + L    G       +R+  +L+SHL 
Sbjct: 100 AS---GGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSHADPVRI--RLLSHLN 154

Query: 140 QRLNEMD 146
               EM+
Sbjct: 155 SYAAEME 161


>gi|62006465|gb|AAX60110.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 106

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 33/130 (25%)

Query: 87  KMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG 
Sbjct: 3   KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGH 61

Query: 141 RLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESM 199
           +L +M +       ++D+   P                     V+  D   S+    E +
Sbjct: 62  QLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKSPREEDI 96

Query: 200 PSPKSVWRPW 209
              + VWRPW
Sbjct: 97  HHGEEVWRPW 106


>gi|50950203|ref|NP_001002973.1| class E basic helix-loop-helix protein 41 [Canis lupus familiaris]
 gi|33439702|gb|AAP12464.1| SHARP1 protein [Canis lupus familiaris]
 gi|33439704|gb|AAP12465.1| SHARP1 protein [Canis lupus familiaris]
          Length = 513

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|62006473|gb|AAX60114.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006489|gb|AAX60122.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 108

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 33/130 (25%)

Query: 87  KMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQ 140
           K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG 
Sbjct: 5   KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGH 63

Query: 141 RLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESM 199
           +L +M +       ++D+   P                     V+  D   S+    E +
Sbjct: 64  QLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKSPREEDI 98

Query: 200 PSPKSVWRPW 209
              + VWRPW
Sbjct: 99  HHGEEVWRPW 108


>gi|426235674|ref|XP_004011805.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein 1 [Ovis aries]
          Length = 299

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|88319944|ref|NP_001001172.2| hairy/enhancer-of-split related with YRPW motif protein 1 [Bos
           taurus]
 gi|119370655|sp|Q2KIN4.1|HEY1_BOVIN RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 1
 gi|86438224|gb|AAI12575.1| Hairy/enhancer-of-split related with YRPW motif 1 [Bos taurus]
 gi|296480540|tpg|DAA22655.1| TPA: hairy/enhancer-of-split related with YRPW motif protein 1 [Bos
           taurus]
          Length = 304

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|7141336|gb|AAF37297.1|AF232239_1 HES-related repressor protein 2 HERP2 [Homo sapiens]
          Length = 304

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|297665390|ref|XP_002811046.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein isoform 1 [Pongo abelii]
 gi|395730712|ref|XP_003775776.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein isoform 2 [Pongo abelii]
          Length = 328

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 17/127 (13%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML- 98

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGID-----LRLGTKLMSHLG 139
                      DA      FR+ GF  C  EV + L    G       +R+  +L+SHL 
Sbjct: 99  --HATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSHADPVRI--RLLSHLN 154

Query: 140 QRLNEMD 146
               EM+
Sbjct: 155 SYAAEME 161


>gi|46093406|dbj|BAD14304.1| cardiovascular basic helix-loop-helix factor 2 [Bos taurus]
          Length = 304

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|149048480|gb|EDM01021.1| hairy/enhancer-of-split related with YRPW motif 1, isoform CRA_c
           [Rattus norvegicus]
          Length = 217

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|402878549|ref|XP_003902942.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Papio anubis]
          Length = 304

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|449270326|gb|EMC81014.1| Class E basic helix-loop-helix protein 40 [Columba livia]
          Length = 410

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 22/127 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIEQQQQ 113

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTP-GIDLRLGTKLMSHL 138
           ++ +             N  +  + FR+GF  CA E+ + LA    G DL+  ++L+SHL
Sbjct: 114 KIMALQNGLQAGDLSSRNLDSSQEMFRSGFQMCAKEMLQYLAKHENGKDLK-SSQLVSHL 172

Query: 139 GQRLNEM 145
            +  +E+
Sbjct: 173 HRMASEV 179


>gi|348588683|ref|XP_003480094.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Cavia porcellus]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSMIEGLDASDPLRVRLVSHL 158


>gi|224080105|ref|XP_002190778.1| PREDICTED: transcription factor HES-5-like isoform 1 [Taeniopygia
           guttata]
          Length = 161

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 4/108 (3%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+TV +L++  + Q
Sbjct: 21  KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEMTVSYLKQQSQLQ 79

Query: 93  RLASNPVTDADR--FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
              +     + +  FR G++ C  E    L S   +     TKL+SH 
Sbjct: 80  MKTAGSFHKSSQFDFREGYSRCLQEAFYFL-SLHKVRTETQTKLLSHF 126


>gi|149024732|gb|EDL81229.1| hairy and enhancer of split 3 (Drosophila), isoform CRA_a [Rattus
           norvegicus]
          Length = 200

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 26/210 (12%)

Query: 15  NTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEK 74
            T    +  P      +RK+ KP++E+KRRARIN  L++L+ L+      +     KLEK
Sbjct: 2   GTEPTSKGSPSGAPSSFRKISKPLMEKKRRARINLSLEQLRSLLERHYSHQIRK-RKLEK 60

Query: 75  ADILELTVQHLQKMRRQQR---LASNPVTDADRFRAGFTTCANEVSKCLASTPGID---L 128
           ADILEL+V++++ ++   +   L  + V     FR G    +  +       PG D   L
Sbjct: 61  ADILELSVKYVRSLQNSLQGLWLVPSGVDYPSGFRGGLPGSSQRL------RPGEDDSGL 114

Query: 129 RLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTP------PPSPHSDTYSMPLTPASS--- 179
           R    L    G   +  D  +P +  V+  C P      PP+  S +   P  P      
Sbjct: 115 RCPLLLQRRAG---STTDSANPQTASVLSPCLPAIWAPGPPAGGSQSPQSPFPPLGGLLE 171

Query: 180 GSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
            S+ +      S  +     P  + VWRPW
Sbjct: 172 SSTGILAPPPASNCQAENPRPGFR-VWRPW 200


>gi|301784963|ref|XP_002927896.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Ailuropoda melanoleuca]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|380787831|gb|AFE65791.1| hairy/enhancer-of-split related with YRPW motif protein 1 isoform a
           [Macaca mulatta]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|395818323|ref|XP_003782583.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Otolemur garnettii]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|390475740|ref|XP_002759069.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Callithrix jacchus]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|61357594|gb|AAX41411.1| hairy/enhancer-of-split related with YRPW motif 1 [synthetic
           construct]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|56118548|ref|NP_001007911.1| hairy/enhancer-of-split related with YRPW motif protein 1 [Xenopus
           (Silurana) tropicalis]
 gi|82198482|sp|Q66KK8.1|HEY1_XENTR RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 1
 gi|51513367|gb|AAH80349.1| hairy/enhancer-of-split related with YRPW motif 1 [Xenopus
           (Silurana) tropicalis]
 gi|89272012|emb|CAJ83693.1| hairy/enhancer-of-split related with YRPW motif 1 [Xenopus
           (Silurana) tropicalis]
          Length = 300

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 49  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 103

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 104 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGMDTTDPLRVRLVSHL 157


>gi|410964027|ref|XP_003988558.1| PREDICTED: class E basic helix-loop-helix protein 41 [Felis catus]
          Length = 311

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|61367728|gb|AAX43038.1| hairy/enhancer-of-split related with YRPW motif 1 [synthetic
           construct]
          Length = 305

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 RESAS 169


>gi|300797630|ref|NP_001178774.1| hairy/enhancer-of-split related with YRPW motif protein 1 [Rattus
           norvegicus]
          Length = 292

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|224166768|ref|XP_002188204.1| PREDICTED: transcription factor HES-4-A-like, partial
          [Taeniopygia guttata]
          Length = 61

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 44/57 (77%)

Query: 36 KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
          KP++E++RRA IN  L +LK L++ AL+ +    SKLEKADILE+TV+HL+ ++R Q
Sbjct: 3  KPIMEKRRRACINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRSLQRAQ 59


>gi|55715255|gb|AAV59061.1| enhancer of split complex m5 protein [Drosophila melanogaster]
          Length = 178

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 56/85 (65%), Gaps = 3/85 (3%)

Query: 25  ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
           +S+T  Y KV KP+LER+RRAR+N+CLD LK L V   Q + + + +++KA++LE  +  
Sbjct: 12  VSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVF 69

Query: 85  LQKMRRQQRLASNPVTDADRFRAGF 109
           ++K   +Q+   +P+   D F+ G+
Sbjct: 70  MRKQVVKQQAPVSPLP-MDSFKNGY 93


>gi|54696986|gb|AAV38865.1| hairy/enhancer-of-split related with YRPW motif 1 [synthetic
           construct]
 gi|61367718|gb|AAX43037.1| hairy/enhancer-of-split related with YRPW motif 1 [synthetic
           construct]
          Length = 305

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|410987347|ref|XP_003999966.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Felis catus]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|311253697|ref|XP_001928567.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Sus scrofa]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|15721902|gb|AAL06278.1|AF254637_1 basic helix-loop-helix protein OAF1 [Homo sapiens]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|224487797|dbj|BAH24133.1| hairy/enhancer-of-split related with YRPW motif 1 [synthetic
           construct]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|403298894|ref|XP_003940237.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Saimiri boliviensis boliviensis]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|344273191|ref|XP_003408407.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Loxodonta africana]
          Length = 303

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDTSDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|157818629|ref|NP_001101447.1| hairy/enhancer-of-split related with YRPW motif-like protein
           [Rattus norvegicus]
 gi|149023877|gb|EDL80374.1| hairy/enhancer-of-split related with YRPW motif-like (predicted)
           [Rattus norvegicus]
          Length = 326

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 11/124 (8%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLH 99

Query: 90  RQQRLA-SNPVTDADRFRA-GFTTCANEVSKCLASTPGID-----LRLGTKLMSHLGQRL 142
                   +    A  FR+ GF  C  EV + L    G       +R+  +L+SHL    
Sbjct: 100 ASGGAGFFDARALAVDFRSIGFRECLTEVVRYLGVLEGPSSHADPVRI--RLLSHLNSYA 157

Query: 143 NEMD 146
            EM+
Sbjct: 158 AEME 161


>gi|332240699|ref|XP_003269523.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein 1 [Nomascus leucogenys]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|193786657|dbj|BAG51980.1| unnamed protein product [Homo sapiens]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|197098536|ref|NP_001125323.1| hairy/enhancer-of-split related with YRPW motif protein 1 [Pongo
           abelii]
 gi|55727690|emb|CAH90597.1| hypothetical protein [Pongo abelii]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|338728271|ref|XP_001914894.2| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein 1-like [Equus caballus]
          Length = 304

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|50950165|ref|NP_001002953.1| hairy/enhancer-of-split related with YRPW motif protein 1 [Canis
           lupus familiaris]
 gi|13124293|sp|Q9TSZ2.1|HEY1_CANFA RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 1; AltName: Full=Hairy and enhancer of
           split-related protein 1; Short=HESR-1
 gi|6687241|emb|CAB65543.1| bHLH protein Hesr-1/Hey1 [Canis lupus familiaris]
          Length = 304

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQ 164

Query: 145 MDKIS 149
            +  S
Sbjct: 165 REAAS 169


>gi|426372035|ref|XP_004052937.1| PREDICTED: class E basic helix-loop-helix protein 41 [Gorilla
           gorilla gorilla]
          Length = 526

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 157 LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 214

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 215 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 253


>gi|105990528|ref|NP_036390.3| hairy/enhancer-of-split related with YRPW motif protein 1 isoform a
           [Homo sapiens]
 gi|114620582|ref|XP_519823.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 isoform 2 [Pan troglodytes]
 gi|397522562|ref|XP_003831331.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Pan paniscus]
 gi|426359984|ref|XP_004047233.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Gorilla gorilla gorilla]
 gi|13124298|sp|Q9Y5J3.1|HEY1_HUMAN RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 1; AltName: Full=Cardiovascular helix-loop-helix
           factor 2; Short=CHF-2; AltName: Full=Class B basic
           helix-loop-helix protein 31; Short=bHLHb31; AltName:
           Full=HES-related repressor protein 1; AltName:
           Full=Hairy and enhancer of split-related protein 1;
           Short=HESR-1; AltName: Full=Hairy-related transcription
           factor 1; Short=HRT-1; Short=hHRT1
 gi|5059323|gb|AAD38967.1|AF151522_1 hairy and enhancer of split related-1 [Homo sapiens]
 gi|5802653|gb|AAD51749.1|AF176422_1 cardiovascular helix-loop-helix factor 2 [Homo sapiens]
 gi|11127954|gb|AAG31156.1|AF311883_1 hairy-related transcription factor 1 [Homo sapiens]
 gi|7018332|emb|CAB75715.1| HEY1 protein [Homo sapiens]
 gi|12804855|gb|AAH01873.1| Hairy/enhancer-of-split related with YRPW motif 1 [Homo sapiens]
 gi|54696992|gb|AAV38868.1| hairy/enhancer-of-split related with YRPW motif 1 [Homo sapiens]
 gi|61357599|gb|AAX41412.1| hairy/enhancer-of-split related with YRPW motif 1 [synthetic
           construct]
 gi|119607472|gb|EAW87066.1| hairy/enhancer-of-split related with YRPW motif 1 [Homo sapiens]
 gi|189053825|dbj|BAG36080.1| unnamed protein product [Homo sapiens]
 gi|325464491|gb|ADZ16016.1| hairy/enhancer-of-split related with YRPW motif 1 [synthetic
           construct]
 gi|410225402|gb|JAA09920.1| hairy/enhancer-of-split related with YRPW motif 1 [Pan troglodytes]
 gi|410249556|gb|JAA12745.1| hairy/enhancer-of-split related with YRPW motif 1 [Pan troglodytes]
 gi|410334345|gb|JAA36119.1| hairy/enhancer-of-split related with YRPW motif 1 [Pan troglodytes]
          Length = 304

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|363730722|ref|XP_425926.3| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 [Gallus gallus]
          Length = 261

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 12/162 (7%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASN 97
           ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +         
Sbjct: 13  IIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML---HTAGGK 67

Query: 98  PVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMDKISP 150
              DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++ +  S 
Sbjct: 68  GYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAASG 127

Query: 151 LSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
               +  +       H    S PL    +G     T   +S+
Sbjct: 128 AHAGIGHIPWGNAFGHHPHISHPLLLPQNGPGNTSTTASSSE 169


>gi|117606332|ref|NP_034553.2| hairy/enhancer-of-split related with YRPW motif protein 1 [Mus
           musculus]
 gi|5802655|gb|AAD51750.1|AF176423_1 cardiovascular helix-loop-helix factor 2 [Mus musculus]
 gi|6503004|gb|AAF14545.1|AF172286_1 hairy-related transcription factor 1 [Mus musculus]
 gi|7141340|gb|AAF37299.1|AF232241_1 HES-related repressor protein 2 HERP2 [Mus musculus]
 gi|5578844|emb|CAB51321.1| basic-helix-loop-helix protein (bHLH) [Mus musculus]
 gi|7670444|dbj|BAA95073.1| unnamed protein product [Mus musculus]
 gi|55991528|gb|AAH86635.1| Hairy/enhancer-of-split related with YRPW motif 1 [Mus musculus]
 gi|74148668|dbj|BAE24283.1| unnamed protein product [Mus musculus]
 gi|148673250|gb|EDL05197.1| hairy/enhancer-of-split related with YRPW motif 1, isoform CRA_a
           [Mus musculus]
          Length = 299

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|12847087|dbj|BAB27432.1| unnamed protein product [Mus musculus]
          Length = 299

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 158


>gi|355564091|gb|EHH20591.1| hypothetical protein EGK_03474, partial [Macaca mulatta]
          Length = 198

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|354491811|ref|XP_003508047.1| PREDICTED: class E basic helix-loop-helix protein 41-like
           [Cricetulus griseus]
          Length = 167

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + LA
Sbjct: 109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>gi|431908406|gb|ELK12003.1| Class E basic helix-loop-helix protein 41 [Pteropus alecto]
          Length = 277

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|355672549|gb|AER95063.1| basic helix-loop-helix family, member e41 [Mustela putorius furo]
          Length = 280

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|268537092|ref|XP_002633682.1| C. briggsae CBR-LIN-22 protein [Caenorhabditis briggsae]
          Length = 164

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
          +K  KP++E+KRRARIN+ L +LK +++          SK EKADILE+TV++LQ++R  
Sbjct: 20 QKKNKPLMEKKRRARINKSLSQLKQILIQDGHKNSAQHSKWEKADILEMTVEYLQQLRSS 79

Query: 92 Q 92
          Q
Sbjct: 80 Q 80


>gi|296225750|ref|XP_002758633.1| PREDICTED: class E basic helix-loop-helix protein 40 [Callithrix
           jacchus]
          Length = 412

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N  T  + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|403270406|ref|XP_003927173.1| PREDICTED: class E basic helix-loop-helix protein 40 [Saimiri
           boliviensis boliviensis]
          Length = 412

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N  T  + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|156367057|ref|XP_001627236.1| predicted protein [Nematostella vectensis]
 gi|156214140|gb|EDO35136.1| predicted protein [Nematostella vectensis]
          Length = 60

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 44/57 (77%)

Query: 36 KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
          KP++E++RR RINR L+ELK L++ A   +    +KLEKADILE+TV+HL+ ++ QQ
Sbjct: 4  KPVMEKRRRERINRSLEELKRLVLEAQHRDCSRYTKLEKADILEMTVKHLRTLQSQQ 60


>gi|12836059|dbj|BAB23482.1| unnamed protein product [Mus musculus]
          Length = 326

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 17/127 (13%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLH 99

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGID-----LRLGTKLMSHLG 139
                      DA      FR+ GF  C  EV + L    G       +R+  +L+SHL 
Sbjct: 100 AS---GGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSHADPVRI--RLLSHLK 154

Query: 140 QRLNEMD 146
               EM+
Sbjct: 155 SYAAEME 161


>gi|6503008|gb|AAF14547.1|AF172288_1 hairy-related transcription factor 3 [Mus musculus]
          Length = 326

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 17/127 (13%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLH 99

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGID-----LRLGTKLMSHLG 139
                      DA      FR+ GF  C  EV + L    G       +R+  +L+SHL 
Sbjct: 100 AS---GGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSHADPVRI--RLLSHLK 154

Query: 140 QRLNEMD 146
               EM+
Sbjct: 155 SYAAEME 161


>gi|31560486|ref|NP_038933.2| hairy/enhancer-of-split related with YRPW motif-like protein [Mus
           musculus]
 gi|146286206|sp|Q9DBX7.2|HEYL_MOUSE RecName: Full=Hairy/enhancer-of-split related with YRPW motif-like
           protein; AltName: Full=Hairy and enhancer of
           split-related protein 3; AltName: Full=Hairy-related
           transcription factor 3; Short=HRT-3; Short=mHRT3
 gi|6900329|emb|CAB71347.1| basic-helix-loop-helix protein [Mus musculus]
 gi|26324540|dbj|BAC26024.1| unnamed protein product [Mus musculus]
 gi|26348795|dbj|BAC38037.1| unnamed protein product [Mus musculus]
 gi|27544790|dbj|BAC55067.1| hairy and enhance of split related 3 [Mus musculus]
 gi|120577644|gb|AAI30264.1| Hairy/enhancer-of-split related with YRPW motif-like [Mus musculus]
 gi|148698439|gb|EDL30386.1| hairy/enhancer-of-split related with YRPW motif-like [Mus musculus]
          Length = 326

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 17/127 (13%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ + 
Sbjct: 42  QARKKRRGIIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLH 99

Query: 90  RQQRLASNPVTDADR----FRA-GFTTCANEVSKCLASTPGID-----LRLGTKLMSHLG 139
                      DA      FR+ GF  C  EV + L    G       +R+  +L+SHL 
Sbjct: 100 AS---GGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSHADPVRI--RLLSHLK 154

Query: 140 QRLNEMD 146
               EM+
Sbjct: 155 SYAAEME 161


>gi|403269489|ref|XP_003926767.1| PREDICTED: class E basic helix-loop-helix protein 41 [Saimiri
           boliviensis boliviensis]
          Length = 407

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 158 LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 215

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 216 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 254


>gi|431891868|gb|ELK02402.1| Hairy/enhancer-of-split related with YRPW motif protein 1 [Pteropus
           alecto]
          Length = 266

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 12  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 66

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 67  HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 120


>gi|47220438|emb|CAG03218.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 182

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 8/96 (8%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           ++ KP++E+ RR RIN C+D+LK ++    Q +  N SKLEKADILE+TV  L     +Q
Sbjct: 49  QLRKPVVEKMRRDRINSCIDQLKVILEKEFQKQEPN-SKLEKADILEMTVSFL-----RQ 102

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDL 128
           +L   P   +  +  GF  C  E +  L++  G ++
Sbjct: 103 QLQPGPCGGS--YSQGFAHCWRESAPFLSAGSGTEV 136


>gi|147907431|ref|NP_001089096.1| hairy and enhancer of split 5, gene 1 [Xenopus laevis]
 gi|62821753|dbj|BAD95802.1| enhancer of split related protein 1b [Xenopus laevis]
          Length = 154

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 40/177 (22%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+      +  NV KLEKADILE  V +LQ+   Q 
Sbjct: 18  KLRKPIVEKMRRDRINNSIEQLKLLLGKEFHEQEPNV-KLEKADILEKAVSYLQQQTSQ- 75

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLS 152
             + N       ++ GF+ C  E  + L   P  +     KL++HL          +P  
Sbjct: 76  --SPNLAKLEQDYKQGFSCCLKEAVQFLCYYPE-NGETQMKLLNHLQ---------APQR 123

Query: 153 VRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           + V        +PH  TY     P+ S S QV     T++            +WRPW
Sbjct: 124 LSV--------APH--TY----IPSVSDSKQVALASTTNK------------IWRPW 154


>gi|118101012|ref|XP_417552.2| PREDICTED: transcription factor HES-5 isoform 2 [Gallus gallus]
          Length = 161

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+ V +L++    Q
Sbjct: 21  KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEMAVSYLKQQSHLQ 79

Query: 93  RLASNPVTDADR--FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
              S     + +  FR G++ C  E    L S   +     TKL+SH 
Sbjct: 80  MKTSGSFHKSYQFDFREGYSRCLQEAFHFL-SLHKVRTETQTKLLSHF 126


>gi|432883503|ref|XP_004074282.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein 1 [Oryzias latipes]
          Length = 331

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 16/132 (12%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ + 
Sbjct: 47  QARKRRRGIIEKRRRDRINNSLSELRRLVPSAYEKQGS--AKLEKAEILQMTVDHLKML- 103

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHLGQ 140
                      DA     D    GF  C  E ++ L+   G+D    LR+  +L+SHL  
Sbjct: 104 --HAAGGKGYFDAHALAMDYRGLGFRECLAETARYLSIIEGLDSTDPLRM--RLVSHLNN 159

Query: 141 RLNEMDKISPLS 152
              + +  S LS
Sbjct: 160 YATQREAHSGLS 171


>gi|321471045|gb|EFX82019.1| hypothetical protein DAPPUDRAFT_317068 [Daphnia pulex]
          Length = 212

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 29/155 (18%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR-------- 89
           ++E++RR R+N CL +L  L+ +A   +G    ++EK +I+E+T++H++ ++        
Sbjct: 49  IIEKRRRDRMNNCLADLSRLLPSAYMKKGR--GRIEKTEIIEMTIKHMKHLQVHACKEME 106

Query: 90  ------RQQRLASNPVTDADRFRAGFTTCANEVSKCLAS---------TPGIDLRLGTKL 134
                 + ++L SN  T +D++R+GF  C  E  + +            PG D   G++L
Sbjct: 107 SCEIAVQMEQLHSN--TKSDQYRSGFLECITETVQFIGHHQADHHGPFYPGDD--FGSRL 162

Query: 135 MSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDT 169
           ++HL     ++ +   + + +     P P P  +T
Sbjct: 163 VAHLHNHYEKIGRGMFVFISLHSCVFPLPFPFLET 197


>gi|62006441|gb|AAX60098.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006527|gb|AAX60141.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 110

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 34/137 (24%)

Query: 80  LTVQHLQKMRRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           LTV +L K ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+  T 
Sbjct: 1   LTVNYL-KAQQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFXTH 58

Query: 134 LMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQ 192
           LM  LG +L +M +       ++D+   P                     V+  D   S+
Sbjct: 59  LMKQLGHQLKDMKQ----EEEIIDMAEEP---------------------VNLADQKRSK 93

Query: 193 YKMYESMPSPKSVWRPW 209
               E +   + VWRPW
Sbjct: 94  SPREEDIHHGEEVWRPW 110


>gi|395538958|ref|XP_003771441.1| PREDICTED: class E basic helix-loop-helix protein 41 [Sarcophilus
           harrisii]
          Length = 337

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+  D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSMKSPIQADLDSFHSGFQTCAKEVMQYLS 147


>gi|7594823|dbj|BAA94695.1| helix-loop-helix transcription factor [Mus musculus]
          Length = 200

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 14/188 (7%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +RK+ KP++E+KRRARIN  L++L+ L+      +     KLEKADILEL+V++++ ++ 
Sbjct: 18  FRKISKPLMEKKRRARINVSLEQLRSLLERHYSHQIRK-RKLEKADILELSVKYMRSLQN 76

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPG-IDLRLGTKLMSHLGQRLNEMDKIS 149
             +    PV     + +GF      VS+ L    G   LR    L    G   +  D  +
Sbjct: 77  SLQ-GLWPVPSGVDYPSGFHGGLRGVSQRLRPGEGDSGLRCPLLLQRREG---STTDSAN 132

Query: 150 PLSVRVMDVCTP---PPS-----PHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPS 201
           P +  V++ C P    PS      HS    +PL      SS        +     ES   
Sbjct: 133 PQATSVLNPCLPAIWAPSRAAGGSHSPQSPLPLPGGLLESSTDVVAPQPASNCQAESTRP 192

Query: 202 PKSVWRPW 209
              VWRPW
Sbjct: 193 GFRVWRPW 200


>gi|327292208|ref|XP_003230812.1| PREDICTED: transcription factor HES-5-like, partial [Anolis
           carolinensis]
          Length = 134

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 79/177 (44%), Gaps = 48/177 (27%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+TV +L    +QQ  A
Sbjct: 3   KPVVEKMRRDRINSSIEQLKLLLEKEFQQHQPN-SKLEKADILEMTVDYL----KQQSQA 57

Query: 96  SNPVTDADR---FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLS 152
              V   D    F+ G++ C +E  + + S   +      KL++H  QR       S LS
Sbjct: 58  QAKVVQKDAQVDFKQGYSKCLHEAFQFM-SHHKVHAETQAKLVNHF-QR-------SQLS 108

Query: 153 VRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
                   PP     DT S P T   + S                   S  ++WRPW
Sbjct: 109 --------PP-----DTTSSPATLKHTSSK------------------SLHNLWRPW 134


>gi|13124297|sp|Q9WV93.1|HEY1_MOUSE RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 1; AltName: Full=Hairy and enhancer of
           split-related protein 1; Short=HESR-1; AltName:
           Full=Hairy-related transcription factor 1; Short=HRT-1;
           Short=mHRT1
 gi|5059321|gb|AAD38966.1|AF151521_1 hairy and enhancer of split related-1 [Mus musculus]
          Length = 299

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 104

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                    DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 105 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLLVRLVSHL 158


>gi|47086903|ref|NP_997726.1| hairy/enhancer-of-split related with YRPW motif protein 1 [Danio
           rerio]
 gi|82211974|sp|Q8AXV6.1|HEY1_DANRE RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 1
 gi|23954306|emb|CAD53342.1| basic helix-loop-helix transcription factor [Danio rerio]
 gi|63101876|gb|AAH95317.1| Hairy/enhancer-of-split related with YRPW motif 1 [Danio rerio]
 gi|182888710|gb|AAI64111.1| Hey1 protein [Danio rerio]
          Length = 317

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 16/118 (13%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ + 
Sbjct: 47  QARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML- 103

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGID----LRLGTKLMSHL 138
                      DA     D    GF  C  E ++ L+   G+D    LR+  +L+SHL
Sbjct: 104 --HAAGGKGYFDAHALAMDYRGLGFRECLAETARYLSIIEGLDNTDPLRI--RLVSHL 157


>gi|270013228|gb|EFA09676.1| hypothetical protein TcasGA2_TC011804 [Tribolium castaneum]
          Length = 146

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 10/80 (12%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMV--------TALQAEGENVSKLEKADILELT 81
           + RKV KP++E+KRRARIN  L+ LK +++        ++ +  G+  +KLEKADILE+T
Sbjct: 13  ESRKVRKPLMEKKRRARINDSLEALKQILLDSKTTLKESSGKKSGQRTAKLEKADILEMT 72

Query: 82  VQHLQKMRRQQRLASNPVTD 101
           V+++Q +R   +++ N   D
Sbjct: 73  VRYVQHLR--SKISQNEAQD 90


>gi|17298169|dbj|BAB78541.1| HES-related 1A' [Xenopus laevis]
          Length = 180

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 4/107 (3%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +RK++KP++E++RR RIN  L++L+  +   L++E     K+EKA+ILE TVQ LQ   R
Sbjct: 13  HRKLLKPLVEKRRRERINNSLEKLRIFLFQTLKSEKLKNPKVEKAEILECTVQFLQS--R 70

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSH 137
           +         D + +++GF  C       + S P ++  +  +L+SH
Sbjct: 71  KLLPLDREAVDKE-YQSGFQHCLETTLHFMNSKPDMN-GVTKELLSH 115


>gi|395744088|ref|XP_002823091.2| PREDICTED: class E basic helix-loop-helix protein 41, partial
           [Pongo abelii]
          Length = 257

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|410907744|ref|XP_003967351.1| PREDICTED: class E basic helix-loop-helix protein 41-like [Takifugu
           rubripes]
          Length = 427

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 30/146 (20%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL  +     ++ Q
Sbjct: 52  LIEKKRRDRINECIGQLKDLLPEHLKL--STLGHLEKAVVLELTLKHLNALTAVTEQQHQ 109

Query: 93  RLAS---------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG--TKLMSHLGQR 141
           ++ +         +   D D F +GF  CA EV + L+       R     +L++HL + 
Sbjct: 110 KIIALQNGDRSMKSIHADLDAFHSGFQACAKEVLQYLSQVENWAAREQRCAQLINHLHKT 169

Query: 142 LNEMDKISPLSVRVMDVCTP-PPSPH 166
           L +           +  C P PPS H
Sbjct: 170 LAQ-----------LQTCAPQPPSQH 184


>gi|313235049|emb|CBY10708.1| unnamed protein product [Oikopleura dioica]
          Length = 233

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 44/58 (75%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
          R   KP++E++RR RIN+ L+ELK +++ A + +  + SKLEKADILE++V+++  ++
Sbjct: 25 RATSKPLMEKRRRERINKSLNELKSVLLEAYRRDSASCSKLEKADILEMSVRYIHSLK 82


>gi|355785975|gb|EHH66158.1| hypothetical protein EGM_03084, partial [Macaca fascicularis]
          Length = 156

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|344282983|ref|XP_003413252.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor HES-5-like
           [Loxodonta africana]
          Length = 231

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 6/124 (4%)

Query: 15  NTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEK 74
           +TV +E L P  +T   RK   P++E+ RR RIN  +++LK L+         N SKLEK
Sbjct: 71  STVAVELLSPKEKTGXLRK---PVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SKLEK 126

Query: 75  ADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKL 134
           ADILE+ V +L+  +     A+ P +    +  G++ C  E  + L      D  L  KL
Sbjct: 127 ADILEMAVSYLKHSKAFAAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTHL--KL 184

Query: 135 MSHL 138
           + H 
Sbjct: 185 LYHF 188


>gi|47229467|emb|CAF99455.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 134

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 11/120 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   SKLEKA+IL++TV HL+ +   
Sbjct: 20  RKKRRGIIEKRRRDRINHSLSELRRLVPSAFEKQGS--SKLEKAEILQMTVDHLKLL--- 74

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR-LGTKLMSHLGQRLNEM 145
             ++S    DA     D    GF  C  EV + L+   G     +  +L+SHL    +E+
Sbjct: 75  HTVSSKGYFDARALAVDYRTLGFRECVGEVVRYLSCLDGESTDPVAARLVSHLSHCASEL 134


>gi|449494929|ref|XP_004175332.1| PREDICTED: LOW QUALITY PROTEIN: hairy/enhancer-of-split related
           with YRPW motif protein 1 [Taeniopygia guttata]
          Length = 320

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 12/162 (7%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASN 97
           ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +         
Sbjct: 72  IIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTA---GGK 126

Query: 98  PVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMDKISP 150
              DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++ +  S 
Sbjct: 127 GYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAASS 186

Query: 151 LSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQ 192
               +  +       H      PL  A +G     T   +++
Sbjct: 187 AHTGIGHIPWGSAFGHHPHIPHPLLLAQNGHGNTSTTASSTE 228


>gi|44890382|gb|AAH66738.1| Bhlhe40 protein [Danio rerio]
 gi|84570473|dbj|BAE72666.1| bHLH protein DEC1 [Danio rerio]
          Length = 403

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 21/136 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALNNLLEQQQQ 113

Query: 93  RLAS------------NPVTDADR-FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ S             P  +++  FR+GF  CA EV + LA+   +       ++ HL 
Sbjct: 114 KIISLQNGLQIGEQGNGPSENSEEMFRSGFHLCAKEVLQFLANQETMRDLTTAHIIEHLQ 173

Query: 140 QRLNEMDKISPLSVRV 155
           +  +E+ + SP S R+
Sbjct: 174 KVASELIQ-SPPSPRL 188


>gi|148228639|ref|NP_001083926.1| hairy/enhancer-of-split related with YRPW motif protein 1 [Xenopus
           laevis]
 gi|82221711|sp|Q9I8A3.1|HEY1_XENLA RecName: Full=Hairy/enhancer-of-split related with YRPW motif
           protein 1; Short=XHey-1; AltName: Full=Hairy and
           enhancer of split-related protein 1; Short=Hesr-1;
           AltName: Full=Hairy-related transcription factor 1;
           Short=HRT-1; Short=XHRT1; Short=xHRT-1; AltName:
           Full=Protein xbc8
 gi|8979886|emb|CAB96791.1| bHLH protein Hesr-1/Hey1 [Xenopus laevis]
 gi|54038118|gb|AAH84410.1| Xbc8 protein [Xenopus laevis]
          Length = 294

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 12/150 (8%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +   
Sbjct: 45  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML--- 99

Query: 92  QRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNE 144
                    DA     D    GF  C  EV++ L+   G++    L  +L+SHL    ++
Sbjct: 100 HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGMETADPLRVRLVSHLNNYASQ 159

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPL 174
            +  S     +  +       H    S PL
Sbjct: 160 REAASTAHTSIGHIPWGGTFAHHPHLSHPL 189


>gi|148708084|gb|EDL40031.1| hairy and enhancer of split 6 (Drosophila), isoform CRA_b [Mus
           musculus]
          Length = 254

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 33/137 (24%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMV-TALQAE---GEN------------------- 68
           RK  KP++E+KRRARIN  L EL+ L+  T ++ E   GE                    
Sbjct: 26  RKARKPLVEKKRRARINESLQELRLLLAGTEVRRERCRGEGDLQGAPRSARPDSTPFPSA 85

Query: 69  --VSKLEKADILELTVQHLQ-----KMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA 121
              +KLE A++LELTV+ +Q     + R +++L +     ++RF AG+  C +EV   ++
Sbjct: 86  QVQAKLENAEVLELTVRRVQGALRGRAREREQLQAEA---SERFAAGYIQCMHEVHTFVS 142

Query: 122 STPGIDLRLGTKLMSHL 138
           +   ID  +  +L++HL
Sbjct: 143 TCQAIDATVSAELLNHL 159


>gi|313212903|emb|CBY36810.1| unnamed protein product [Oikopleura dioica]
 gi|313243128|emb|CBY39808.1| unnamed protein product [Oikopleura dioica]
          Length = 233

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 44/58 (75%)

Query: 32 RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
          R   KP++E++RR RIN+ L+ELK +++ A + +  + SKLEKADILE++V+++  ++
Sbjct: 25 RATSKPLMEKRRRERINKSLNELKSVLLEAYRRDSASCSKLEKADILEMSVRYIHSLK 82


>gi|397517523|ref|XP_003828959.1| PREDICTED: class E basic helix-loop-helix protein 41 [Pan paniscus]
          Length = 294

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|291399619|ref|XP_002716196.1| PREDICTED: hairy and enhancer of split homolog 2 [Oryctolagus
           cuniculus]
          Length = 167

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK +KP+LE++RRARIN+ L +L+ L++  L  E    SKLEKADILELTV+ L+++ 
Sbjct: 12  QLRKSLKPLLEKRRRARINQSLSQLQGLLLPLLGRENSRSSKLEKADILELTVRFLREL- 70

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQR 141
                 +     +D +R G+  C   +++ L +   ++  +  +L+ HL +R
Sbjct: 71  PASACPAAAPAPSDSYREGYRACLARLARVLPACCVLEPAVSARLLEHLRRR 122


>gi|114703730|ref|NP_997844.2| class E basic helix-loop-helix protein 40 [Danio rerio]
 gi|55824594|gb|AAV66417.1| basic-helix-loop-helix protein [Danio rerio]
          Length = 403

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 21/136 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALNNLLEQQQQ 113

Query: 93  RLAS------------NPVTDADR-FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ S             P  +++  FR+GF  CA EV + LA+   +       ++ HL 
Sbjct: 114 KIISLQNGLQIGEQGNGPSENSEEMFRSGFHLCAKEVLQFLANQETMRDLTTAHIIEHLQ 173

Query: 140 QRLNEMDKISPLSVRV 155
           +  +E+ + SP S R+
Sbjct: 174 KVASELIQ-SPPSPRL 188


>gi|351703399|gb|EHB06318.1| Hairy/enhancer-of-split related with YRPW motif protein 1
           [Heterocephalus glaber]
          Length = 308

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 12/165 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEKGSAKLEKAEILQMTVDHLKML- 108

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRL 142
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    
Sbjct: 109 --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSMIEGLDASDPLRVRLVSHLNNYA 166

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTC 187
           ++ +  S     +  +       H    + PL  A +G S   T 
Sbjct: 167 SQREAASGAHAGLGHIPWGSAFGHHPHIAHPLLLAQNGHSNAGTT 211


>gi|224079776|ref|XP_002193411.1| PREDICTED: transcription factor HES-5 [Taeniopygia guttata]
          Length = 165

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 35/178 (19%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+ V +L++ R   
Sbjct: 22  KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEVAVSYLKQQR--A 78

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLA-STPGIDLRLGTKLMSHLGQRLNEMDKISPL 151
            +  NP  D   F +G+  C  E    L+   P  + ++  +L+ H  +     D     
Sbjct: 79  FIHKNPEQD---FNSGYLRCLKEAMHFLSYYEPKKETQV--QLIKHFCKAQLGAD----- 128

Query: 152 SVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
                            +YS    PA  GS  +  C +  +    +S+P+  ++WRPW
Sbjct: 129 ----------------ASYS----PALRGSP-LSPCVFPRKQPAQKSVPAAPTIWRPW 165


>gi|62006403|gb|AAX60079.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006463|gb|AAX60109.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 103

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 33/128 (25%)

Query: 89  RRQQRLASNPVT------DADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRL 142
           ++QQR+A NP +      + D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG +L
Sbjct: 2   QQQQRVA-NPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQL 60

Query: 143 NEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESMPS 201
            +M +       ++D+   P                     V+  D   S+    E +  
Sbjct: 61  KDMKQ----EEEIIDMAEEP---------------------VNLADQKRSKSPREEDIHH 95

Query: 202 PKSVWRPW 209
            + VWRPW
Sbjct: 96  GEEVWRPW 103


>gi|297261995|ref|XP_001098355.2| PREDICTED: class E basic helix-loop-helix protein 41-like [Macaca
           mulatta]
          Length = 355

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|221044670|dbj|BAH14012.1| unnamed protein product [Homo sapiens]
          Length = 370

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>gi|449277548|gb|EMC85661.1| Class E basic helix-loop-helix protein 41, partial [Columba livia]
          Length = 167

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +PV  D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSMKSPVQADLDAFHSGFQTCAKEVLQYLS 147


>gi|327282922|ref|XP_003226191.1| PREDICTED: class E basic helix-loop-helix protein 41-like [Anolis
           carolinensis]
          Length = 400

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 45  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 102

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+ +D D F +GF TC  EV + L+
Sbjct: 103 KIIALQNGERSPKSPLQSDLDAFHSGFQTCTKEVLQYLS 141


>gi|397503224|ref|XP_003822230.1| PREDICTED: transcription factor HES-3 [Pan paniscus]
          Length = 245

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 2/90 (2%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +RK+ KP++E+KRRARIN  L++LK L+      +     KLEKADILEL+V++++ ++ 
Sbjct: 60  FRKISKPLMEKKRRARINLSLEQLKSLLEKHYSHQIRK-RKLEKADILELSVKYMRSLQN 118

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCL 120
             +    PV       +GF +C   VS+ L
Sbjct: 119 SLQ-GLWPVPRGAEHPSGFRSCLPGVSQLL 147


>gi|348533914|ref|XP_003454449.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Oreochromis niloticus]
          Length = 317

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 6/113 (5%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ + 
Sbjct: 46  QARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLH 103

Query: 90  RQ--QRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDL--RLGTKLMSHL 138
               +      V   D    GF  C  E ++ L+   G D    L  +L+SHL
Sbjct: 104 ASGGKGYFEAHVLAKDYRSLGFRECLAETARYLSIIEGRDSTDSLRVRLVSHL 156


>gi|13242287|ref|NP_077359.1| transcription factor HES-5 [Rattus norvegicus]
 gi|547630|sp|Q03062.1|HES5_RAT RecName: Full=Transcription factor HES-5; AltName: Full=Hairy and
           enhancer of split 5
 gi|220765|dbj|BAA02081.1| HES-5 [Rattus norvegicus]
 gi|149024783|gb|EDL81280.1| hairy and enhancer of split 5 (Drosophila) [Rattus norvegicus]
          Length = 166

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 32/198 (16%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVEMLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTS 191
            KL+ H  QR                    PP+P +       TP    + Q       +
Sbjct: 114 -KLLYHF-QR--------------------PPAPAAPVKE---TPTPGAAPQPARSSTKA 148

Query: 192 QYKMYESMPSPKSVWRPW 209
              +  S  S   +WRPW
Sbjct: 149 AASVSTSRQSACGLWRPW 166


>gi|410919359|ref|XP_003973152.1| PREDICTED: class E basic helix-loop-helix protein 40-like isoform 2
           [Takifugu rubripes]
          Length = 422

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 16/97 (16%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 54  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTSLLEQQQQ 111

Query: 93  R---------LASNPVTDADRFRAGFTTCANEVSKCL 120
           +         +    V  ++ FR+GF  CA E+ + L
Sbjct: 112 KILALQNGVQIGEPQVEKSEMFRSGFHMCAKEIHQYL 148


>gi|84993732|ref|NP_001034196.1| class E basic helix-loop-helix protein 41 [Danio rerio]
 gi|84570475|dbj|BAE72667.1| bHLH protein DEC2 [Danio rerio]
 gi|94732451|emb|CAK11133.1| novel protein similar to vertebrate basic helix-loop-helix domain
           containing, class B, 3 (BHLHB3) [Danio rerio]
 gi|110559299|gb|ABG75906.1| Dec2 [Danio rerio]
 gi|190337663|gb|AAI63191.1| Basic helix-loop-helix domain containing, class B, 3 like [Danio
           rerio]
 gi|190339982|gb|AAI63162.1| Basic helix-loop-helix domain containing, class B, 3 like [Danio
           rerio]
          Length = 421

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 19/118 (16%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM--------- 88
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL  +         
Sbjct: 51  LIEKKRRDRINECIGQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLNALTAVTEQQHQ 108

Query: 89  ------RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG--TKLMSHL 138
                   ++ L S+   D D F +GF  CA EV + L        R    T+L++HL
Sbjct: 109 KIIALQNGERSLKSSLQADLDAFHSGFQACAKEVLQYLNKVENWTAREQRCTRLINHL 166


>gi|348514594|ref|XP_003444825.1| PREDICTED: transcription factor HES-5-like [Oreochromis niloticus]
          Length = 165

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 44/185 (23%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
            K+ KPM+E+ RR RIN  +++LK L+      +  + SK EKADILE+ V +L+   +Q
Sbjct: 18  HKLRKPMVEKLRRDRINTSIEQLKSLLGPEFLRQQPD-SKQEKADILEMAVSYLRNWLQQ 76

Query: 92  QR---LASNPVTDADRFRAGFTTCANE----VSKCLASTPGIDLRLGTKLMSHLGQRLNE 144
           Q+   L S+P+  +D    G++ C  E    +S C   T    L     L+SH     + 
Sbjct: 77  QKQAGLTSSPMAASD----GYSHCVQEAVSFLSHCQVQTQAHRL-----LLSH----FHG 123

Query: 145 MDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKS 204
           +   S  S    ++ +PP SP     S      S G SQV +C                +
Sbjct: 124 LQASSGTSHSPCNLPSPPGSPLHQVSS------SKGVSQV-SC----------------A 160

Query: 205 VWRPW 209
           +WRPW
Sbjct: 161 LWRPW 165


>gi|395839335|ref|XP_003804112.1| PREDICTED: LOW QUALITY PROTEIN: class E basic helix-loop-helix
           protein 41 [Otolemur garnettii]
          Length = 310

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ----------- 86
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL+           
Sbjct: 51  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query: 87  ---KMRRQQRLASNPV-TDADRFRAGFTTCANEVSKCLA 121
               ++  +R   +P+  D D F +GF TCA EV + L+
Sbjct: 109 KIIALQNGERSLKSPIQADLDAFHSGFQTCAKEVLQYLS 147


>gi|395824553|ref|XP_003785527.1| PREDICTED: class E basic helix-loop-helix protein 40 [Otolemur
           garnettii]
          Length = 410

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RL-------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++               N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIMALQSGLQAGELSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLITHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|47208513|emb|CAF95251.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 128

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 13/121 (10%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+   L ++  + SKLEKAD+LE+TV  L+++++Q+
Sbjct: 21  KLRKPLVEKLRRERINSSIEQLKSLLGPELLSQQPD-SKLEKADVLEMTVCVLRQLQQQK 79

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLS 152
           R  S+   +      G++ C  EV   L+      L+  T+LM H     N +   +P++
Sbjct: 80  RAMSSTAVE-----QGYSRCVQEVGHFLSRE---RLQAQTRLMKH----FNLLQAAAPVT 127

Query: 153 V 153
           +
Sbjct: 128 L 128


>gi|350529415|ref|NP_001231939.1| basic helix-loop-helix family, member e40 [Sus scrofa]
          Length = 412

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|221222034|gb|ACM09678.1| Transcription factor HES-5 [Salmo salar]
          Length = 170

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           +Y K+ KP++E+ RR RIN C+++LK ++      +  N +KLEKADILE+TV  L    
Sbjct: 18  KYIKIRKPIVEKMRRDRINGCIEQLKLILEKEFHKQDPN-TKLEKADILEMTVSFL---- 72

Query: 90  RQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGID 127
            +Q+L  +P      +  G++ C  E  + L+ +P  D
Sbjct: 73  -RQQLQPDP--SQRDYGEGYSQCWRESLQFLSGSPKRD 107


>gi|193211387|ref|NP_001123213.1| class E basic helix-loop-helix protein 40 [Ovis aries]
 gi|215275213|sp|B3F209.1|BHE40_SHEEP RecName: Full=Class E basic helix-loop-helix protein 40;
           Short=bHLHe40; AltName: Full=Class B basic
           helix-loop-helix protein 2; Short=bHLHb2
 gi|152940835|gb|ABS44882.1| basic helix-loop-helix domain containing class B2 protein [Ovis
           aries]
          Length = 412

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|351700922|gb|EHB03841.1| Class E basic helix-loop-helix protein 40 [Heterocephalus glaber]
          Length = 412

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 26/151 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N   + + F +GF TCA EV + LA          ++L+ HL 
Sbjct: 117 KIIALQSGLQTGELSGRNVEANQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVMHLH 176

Query: 140 QRLNEM------DKISPLSVRVMDVCTPPPS 164
           + ++E+       K S  S +VMD    P S
Sbjct: 177 RVVSELLQGGTSRKPSDPSPKVMDFKEKPSS 207


>gi|126336151|ref|XP_001364726.1| PREDICTED: class E basic helix-loop-helix protein 40-like
           [Monodelphis domestica]
          Length = 411

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L+SHL 
Sbjct: 117 KIMALQSGLQAGELSSRNLDASQEMFCSGFQTCAREVLQYLAKHESSRDLKSSQLVSHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RMVSEV 182


>gi|67972413|ref|NP_001020100.1| class E basic helix-loop-helix protein 40 [Bos taurus]
 gi|75060957|sp|Q5EA15.1|BHE40_BOVIN RecName: Full=Class E basic helix-loop-helix protein 40;
           Short=bHLHe40; AltName: Full=Class B basic
           helix-loop-helix protein 2; Short=bHLHb2
 gi|59857873|gb|AAX08771.1| differentiated embryo chondrocyte expressed gene 1 [Bos taurus]
 gi|296474965|tpg|DAA17080.1| TPA: class E basic helix-loop-helix protein 40 [Bos taurus]
 gi|440905736|gb|ELR56081.1| Class E basic helix-loop-helix protein 40 [Bos grunniens mutus]
          Length = 412

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|432908515|ref|XP_004077899.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Oryzias latipes]
          Length = 311

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 6/113 (5%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ + 
Sbjct: 46  QARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLH 103

Query: 90  RQQRLASNPVTD-ADRFRA-GFTTCANEVSKCLASTPGIDL--RLGTKLMSHL 138
                        A  +R+ GF  C  E ++ L+   G D    L  +L+SHL
Sbjct: 104 AASGKGYFEAHALAKDYRSLGFRECLAETARYLSVVEGRDTTDSLRVRLVSHL 156


>gi|16758032|ref|NP_445780.1| class E basic helix-loop-helix protein 40 [Rattus norvegicus]
 gi|20137187|sp|O35780.1|BHE40_RAT RecName: Full=Class E basic helix-loop-helix protein 40;
           Short=bHLHe40; AltName: Full=Class B basic
           helix-loop-helix protein 2; Short=bHLHb2; AltName:
           Full=Enhancer-of-split and hairy-related protein 2;
           Short=SHARP-2
 gi|2267589|gb|AAB63587.1| enhancer-of-split and hairy-related protein 2 [Rattus norvegicus]
          Length = 411

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RL-------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++               N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIMALQSGLQAGDLSGKNIEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|355672546|gb|AER95062.1| basic helix-loop-helix family, member e40 [Mustela putorius furo]
          Length = 411

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|410951618|ref|XP_003982491.1| PREDICTED: class E basic helix-loop-helix protein 40 [Felis catus]
          Length = 412

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|281337594|gb|EFB13178.1| hypothetical protein PANDA_008712 [Ailuropoda melanoleuca]
          Length = 382

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 29  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 86

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 87  KIIALQSGLQAGELSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 146

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 147 RVVSEL 152


>gi|387016384|gb|AFJ50311.1| class E basic helix-loop-helix protein 40-like [Crotalus
           adamanteus]
          Length = 415

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 20/119 (16%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR------- 90
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +         
Sbjct: 62  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTSLIEQQQQ 119

Query: 91  -----QQRLASNPV------TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
                Q+ L ++ +      +  + FR+GF  CA EV + LA    +     ++ MSHL
Sbjct: 120 QIIALQKGLHADELPPRSLESSQEIFRSGFQMCAKEVLQYLAKHENVKDLKSSQFMSHL 178


>gi|73984788|ref|XP_541795.2| PREDICTED: class E basic helix-loop-helix protein 40 isoform 1
           [Canis lupus familiaris]
          Length = 412

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|157278205|ref|NP_001098202.1| bHLH protein DEC1b [Oryzias latipes]
 gi|86355059|dbj|BAE78764.1| bHLH protein DEC1b [Oryzias latipes]
          Length = 428

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 19/118 (16%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 53  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKTLTSLLEQQQQ 110

Query: 93  RLAS------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           ++ +            N     + FR+GF  CA E+   LA+         + ++SHL
Sbjct: 111 KILALQSGMQIEQPPVNQEKSEEMFRSGFHMCAKEILHYLAAHESSGDFTPSHVISHL 168


>gi|301769233|ref|XP_002920034.1| PREDICTED: class E basic helix-loop-helix protein 40-like
           [Ailuropoda melanoleuca]
          Length = 416

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 63  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 120

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 121 KIIALQSGLQAGELSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 180

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 181 RVVSEL 186


>gi|157278207|ref|NP_001098203.1| bHLH protein DEC2 [Oryzias latipes]
 gi|86355061|dbj|BAE78765.1| bHLH protein DEC2 [Oryzias latipes]
          Length = 419

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL  +     ++ Q
Sbjct: 52  LIEKKRRDRINECIGQLKDLLPEHLKL--STLGHLEKAVVLELTLKHLNALTAVTEQQHQ 109

Query: 93  RLAS---------NPV-TDADRFRAGFTTCANEVSKCLA 121
           ++ +         +P+  D D F +GF  CA EV + L+
Sbjct: 110 KIVALQNGDRSLNSPIHADLDVFHSGFQACAKEVLQYLS 148


>gi|149728468|ref|XP_001496332.1| PREDICTED: class E basic helix-loop-helix protein 40-like [Equus
           caballus]
          Length = 412

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|431913501|gb|ELK15176.1| Class E basic helix-loop-helix protein 40 [Pteropus alecto]
          Length = 412

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 20/131 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RL-------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++               N     + F +GF  CA EV + LA          T+L++HL 
Sbjct: 117 KIMALQNGLQAGELSGRNIEASQEMFCSGFQACAREVLQYLAKHENTRDLKSTQLVTHLH 176

Query: 140 QRLNEMDKISP 150
           + ++E+ +  P
Sbjct: 177 RAVSELLQGGP 187


>gi|114147250|gb|ABI50495.1| hairy-related 4 [Hippoglossus hippoglossus]
          Length = 165

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 8/108 (7%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KPM+E+ RR RIN C+++LK L+      +  + SK EKADILE+ V +++  ++Q+
Sbjct: 21  KLRKPMVEKLRRDRINVCIEQLKSLLGPEFLRQQPD-SKQEKADILEMAVSYMRGWQQQK 79

Query: 93  R--LASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
           +  L S P T +D    G++ C  E    L S   +  +   +L+SH 
Sbjct: 80  QVSLTSGPTTASD----GYSRCVQEAVSFL-SHCDVQTQAHRRLLSHF 122


>gi|332248560|ref|XP_003273431.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif-like
           protein [Nomascus leucogenys]
          Length = 520

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 13/117 (11%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASN 97
           ++E++RR RIN  L EL+ L+ TA + +G   SKLEKA++L++TV HL+ +         
Sbjct: 242 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKML---HATGGT 296

Query: 98  PVTDADR----FRA-GFTTCANEVSKCLASTPGIDLRLG---TKLMSHLGQRLNEMD 146
              DA      FR+ GF  C  EV + L    G   R+     +L+SHL     EM+
Sbjct: 297 GFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSSRVDPVRIRLLSHLNSYAAEME 353


>gi|444729957|gb|ELW70356.1| Class E basic helix-loop-helix protein 40 [Tupaia chinensis]
          Length = 412

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNLEAGQEMFCSGFQTCAREVLQYLAKHENARDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|38347684|dbj|BAD01588.1| enhancer of split- and hairy-related protein-2 [Rattus norvegicus]
 gi|149036862|gb|EDL91480.1| basic helix-loop-helix domain containing, class B2 [Rattus
           norvegicus]
          Length = 411

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RL-------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++               N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIMALQSGLQAGDLSGRNIEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|51012523|gb|AAT92568.1| hairy [Episyrphus balteatus]
          Length = 301

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 6/76 (7%)

Query: 70  SKLEKADILELTVQHLQKMRRQQRLASNPVTDA--DRFRAGFTTCANEVSKCLASTPGID 127
           SKLEKADILE TV+HLQ+++RQQ   +        ++F+AGFT CANEVS+     PG+D
Sbjct: 5   SKLEKADILEKTVKHLQELQRQQAALAQAADPKVINKFKAGFTDCANEVSRF----PGLD 60

Query: 128 LRLGTKLMSHLGQRLN 143
             +  +L+ HL   +N
Sbjct: 61  PVVKRRLLQHLSNCIN 76


>gi|344276057|ref|XP_003409826.1| PREDICTED: class E basic helix-loop-helix protein 40-like
           [Loxodonta africana]
          Length = 412

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RL-----------ASNPVTDADR--FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++            S    DA +  F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KILALQSGLQVGELSGRSVDAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|354473108|ref|XP_003498778.1| PREDICTED: class E basic helix-loop-helix protein 40 [Cricetulus
           griseus]
 gi|344235932|gb|EGV92035.1| Class E basic helix-loop-helix protein 40 [Cricetulus griseus]
          Length = 411

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +             N     + F +GF TCA EV + LA          ++L++HL 
Sbjct: 117 KIIALQSGLQAGELSGRNIEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLH 176

Query: 140 QRLNEM 145
           + ++E+
Sbjct: 177 RVVSEL 182


>gi|432116243|gb|ELK37287.1| Hairy/enhancer-of-split related with YRPW motif protein 1 [Myotis
           davidii]
          Length = 224

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 12/119 (10%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASN 97
           ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ +         
Sbjct: 33  IIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKML---HTAGGK 87

Query: 98  PVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEMDKIS 149
              DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    ++ +  S
Sbjct: 88  GYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAAS 146


>gi|1707585|emb|CAA69169.1| basic-helix-loop-helix protein [Mus musculus]
          Length = 404

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 22/127 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 52  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 109

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGI-DLRLGTKLMSHL 138
           ++ +             N     + F +GF TCA EV + LA      DL+  ++L++HL
Sbjct: 110 KIIALQSGLQAGDLSGRNLEAGQEMFCSGFQTCAREVLQYLAKHENTRDLK-SSQLVTHL 168

Query: 139 GQRLNEM 145
            + ++E+
Sbjct: 169 HRVVSEL 175


>gi|6755680|ref|NP_035628.1| class E basic helix-loop-helix protein 40 [Mus musculus]
 gi|20137258|sp|O35185.1|BHE40_MOUSE RecName: Full=Class E basic helix-loop-helix protein 40;
           Short=bHLHe40; AltName: Full=Class B basic
           helix-loop-helix protein 2; Short=bHLHb2; AltName:
           Full=E47 interaction protein 1; Short=EIP1; AltName:
           Full=Stimulated by retinoic acid gene 13 protein
 gi|13958325|gb|AAK50859.1|AF364051_1 CLAST5 [Mus musculus]
 gi|2282606|gb|AAB64228.1| Stra13 [Mus musculus]
 gi|14715105|gb|AAH10720.1| Basic helix-loop-helix family, member e40 [Mus musculus]
 gi|26339220|dbj|BAC33281.1| unnamed protein product [Mus musculus]
 gi|26354859|dbj|BAC41056.1| unnamed protein product [Mus musculus]
 gi|74191996|dbj|BAE32936.1| unnamed protein product [Mus musculus]
 gi|148666996|gb|EDK99412.1| basic helix-loop-helix domain containing, class B2 [Mus musculus]
          Length = 411

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 22/127 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGI-DLRLGTKLMSHL 138
           ++ +             N     + F +GF TCA EV + LA      DL+  ++L++HL
Sbjct: 117 KIIALQSGLQAGDLSGRNLEAGQEMFCSGFQTCAREVLQYLAKHENTRDLK-SSQLVTHL 175

Query: 139 GQRLNEM 145
            + ++E+
Sbjct: 176 HRVVSEL 182


>gi|395522222|ref|XP_003765138.1| PREDICTED: transcription factor HES-5-like [Sarcophilus harrisii]
          Length = 160

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 7/112 (6%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  N + ++ L P  +     ++ KP++E+ RR RIN  +++LK L+    Q    N SK
Sbjct: 1   MAPNAISLDILTPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLA--SNPVTDADRFRAGFTTCANEVSKCLA 121
           LEKADILE+TV +L++    Q  A  S P +    F+ G+  C  E  + L+
Sbjct: 56  LEKADILEMTVSYLKQQSHLQGKAPGSLPRSLQTDFKEGYARCLQEAFQFLS 107


>gi|148226941|ref|NP_001082163.1| hairy and enhancer of split 3, gene 3 [Xenopus laevis]
 gi|14488038|gb|AAK63840.1|AF383158_1 enhancer of split related 2 [Xenopus laevis]
 gi|213623306|gb|AAI69568.1| Enhancer of split related 2 [Xenopus laevis]
 gi|213624986|gb|AAI69566.1| Enhancer of split related 2 [Xenopus laevis]
          Length = 183

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 54/214 (25%)

Query: 2   ENMIHENQINMINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTA 61
            NM    + N+I+     ++L     T Q  K+ KPM+E+ RR RIN  +++L++L+   
Sbjct: 18  HNMAVNGETNLISREYAADKLT----TKQKTKIRKPMVEKMRRDRINSSINQLRNLLEQE 73

Query: 62  LQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLA 121
            Q    + SK EKADILEL V+ L     +Q++ S P  +    R  +   +   SKCL 
Sbjct: 74  FQLLQPD-SKPEKADILELAVKFL-----KQQICSQPQNNKSYQRKDYRDFSQGYSKCLH 127

Query: 122 STPG------IDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLT 175
            T        ++  +  KL++H               +      TP  SPHS        
Sbjct: 128 ETLAFLSFHRVEEHMQLKLINHFH------------CLDTQPTSTPVSSPHSK------G 169

Query: 176 PASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
           P    S+++                    +WRPW
Sbjct: 170 PGPLASTKI--------------------LWRPW 183


>gi|410905325|ref|XP_003966142.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like [Takifugu rubripes]
          Length = 300

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 10/120 (8%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ + 
Sbjct: 46  QARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLH 103

Query: 90  R--QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPG------IDLRLGTKLMSHLGQR 141
               +      V   D    GF  C  E ++ L+   G      + +RL + L S+  QR
Sbjct: 104 ATCGKGYFEAHVLAKDYRSLGFRECLAETARYLSMVEGRESADPLRMRLVSHLSSYASQR 163


>gi|353233254|emb|CCD80609.1| basic helix-loop-helix transcription factor,hes-related
           [Schistosoma mansoni]
          Length = 453

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 39/65 (60%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R++ K M ERKRR RIN  LD L+ L++  L     +  KLEKADILEL V  L+K   Q
Sbjct: 87  RRMAKQMTERKRRDRINALLDNLRTLILKLLHKNPRHHRKLEKADILELVVSFLKKELNQ 146

Query: 92  QRLAS 96
            R  +
Sbjct: 147 NRFKT 151


>gi|126329002|ref|XP_001378086.1| PREDICTED: transcription factor HES-5-like [Monodelphis domestica]
          Length = 162

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 8/109 (7%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  N + ++ L P  +     ++ KP++E+ RR RIN  +++LK L+    Q    N SK
Sbjct: 1   MAPNAISMDILTPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCL 120
           LEKADILE+TV +L   +  +  AS P T    +  G++ C  E  + L
Sbjct: 56  LEKADILEMTVSYL---KHSKAFASCPKTLQQDYSEGYSWCLKEAVQFL 101


>gi|5359728|gb|AAD42783.1| bHLH-WRPW transcription factor ESR-4 [Xenopus laevis]
          Length = 236

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 18/135 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           +++MKP++E++RR RIN+ L+ L+ L++ A   E     K EKADIL+ TV  L      
Sbjct: 27  KRLMKPVIEKRRRDRINQSLEHLRTLLMEATHDESLKNPKTEKADILKKTVHFL------ 80

Query: 92  QRLASNPVTDADR-----FRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEM- 145
            ++  NPV    +     F+ GF    N+ +  L S   I  +    ++  L Q + E  
Sbjct: 81  -KMCHNPVPSDKKKLQSGFKGGFREGLNQATSFLNSADSICEKKKEYMVQRLCQHMEEQT 139

Query: 146 -----DKISPLSVRV 155
                D +  +S++V
Sbjct: 140 QKHWKDSVQDVSLKV 154


>gi|113931458|ref|NP_001039178.1| hairy and enhancer of split 3, gene 1 [Xenopus (Silurana)
           tropicalis]
 gi|89269039|emb|CAJ83992.1| similar to hes5 (hairy and enhancer of split 5 (Drosophila))
           [Xenopus (Silurana) tropicalis]
 gi|163916479|gb|AAI57346.1| hairy and enhancer of split 3, gene 1 [Xenopus (Silurana)
           tropicalis]
          Length = 166

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++L+ L+    Q    + SKLEKADILE+ V +LQ+ ++ Q
Sbjct: 23  KIRKPVIEKMRRDRINHSIEQLRILLERNFQTHHPH-SKLEKADILEMAVSYLQQQKKHQ 81

Query: 93  RLASN--PVTDADRFRAGFTTCANEVSKCLAS 122
              S+  P    D +  G+  C  E    L +
Sbjct: 82  MNRSHLLPENVQDSYYQGYYMCLKETVGFLHT 113


>gi|348505715|ref|XP_003440406.1| PREDICTED: class E basic helix-loop-helix protein 41-like
           [Oreochromis niloticus]
          Length = 430

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 17/99 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL  +     ++ Q
Sbjct: 52  LIEKKRRDRINECIGQLKDLLPEHLKL--STLGHLEKAVVLELTLKHLNALTAVTEQQHQ 109

Query: 93  RL----------ASNPVTDADRFRAGFTTCANEVSKCLA 121
           ++           S+   D D F +GF  CA EV + L+
Sbjct: 110 KIIALQNGDRSMKSSIHADLDAFHSGFQACAKEVLQYLS 148


>gi|410919357|ref|XP_003973151.1| PREDICTED: class E basic helix-loop-helix protein 40-like isoform 1
           [Takifugu rubripes]
          Length = 424

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 18/99 (18%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 54  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTSLLEQQQQ 111

Query: 93  RLAS---------NPVTD--ADRFRAGFTTCANEVSKCL 120
           ++ +          PV    ++ FR+GF  CA E+ + L
Sbjct: 112 KILALQNGVQIEQPPVNQEKSEMFRSGFHMCAKEIHQYL 150


>gi|113205884|ref|NP_001037974.1| hairy and enhancer of split 5, gene 2 [Xenopus (Silurana)
           tropicalis]
 gi|89267485|emb|CAJ81556.1| Helix-loop-helix DNA-binding domain protein with Hairy Orange
           domain, similar to hes5 [Xenopus (Silurana) tropicalis]
 gi|134254269|gb|AAI35289.1| hairy and enhancer of split 5, gene 2 [Xenopus (Silurana)
           tropicalis]
          Length = 158

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 79/182 (43%), Gaps = 48/182 (26%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL--QKMRR 90
           K+ KP++E+ RR RIN  +++LK L+ T    +  NV KLEKADILE+TV +L  Q ++ 
Sbjct: 20  KLRKPVVEKMRRDRINSSIEQLKGLLETVFHKQQPNV-KLEKADILEMTVTYLRQQTLQI 78

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLA---STPGIDLRLGTKLMSHLGQRLNEMDK 147
           +  +  N     D ++ G++ C  EV   L+     P        KL+SH          
Sbjct: 79  KSEIPHNNDIQMD-YKDGYSRCFEEVIDFLSLHQKQPET-----AKLISHF--------- 123

Query: 148 ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWR 207
                             HS         ASS SS    C   SQ K      S  S+WR
Sbjct: 124 ------------------HSK------ATASSISSFPIRC---SQSKTANGTGSSSSLWR 156

Query: 208 PW 209
           PW
Sbjct: 157 PW 158


>gi|126329004|ref|XP_001378106.1| PREDICTED: transcription factor HES-5-like [Monodelphis domestica]
          Length = 163

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 77/179 (43%), Gaps = 38/179 (21%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL--QKMRR 90
           K+ KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+TV +L  Q + +
Sbjct: 21  KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEMTVSYLKQQSLLQ 79

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISP 150
            +   S P +    F+ G+  C  E  + L S         TKL SH         K S 
Sbjct: 80  GKAPGSLPRSLQTDFKEGYARCLQEAFQFL-SFHKAQTDTQTKLRSHF-------QKNSS 131

Query: 151 LSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
            +   +    P P+P          PA  G                   PSP  +WRPW
Sbjct: 132 AAPEGLSPSFPAPNPGKQ-------PALKGP------------------PSP--LWRPW 163


>gi|395510957|ref|XP_003759732.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 isoform 2 [Sarcophilus harrisii]
          Length = 317

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 16/120 (13%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGEN------VSKLEKADILELTVQHL 85
           RK  + ++E++RR RIN  L EL+ L+ +A + +  N       +KLEKA+IL++TV HL
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVRNGLERRGSAKLEKAEILQMTVDHL 109

Query: 86  QKMRRQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
           + +            DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 110 KML---HSAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDTSDPLRVRLVSHL 166


>gi|317418645|emb|CBN80683.1| Transcription factor HES-5 [Dicentrarchus labrax]
          Length = 161

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 36/177 (20%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+      +  + SKLEKADILE+TV  L+++++Q 
Sbjct: 21  KLRKPLVEKLRRERINSSIEQLKSLLGPEFLKQQPD-SKLEKADILEMTVCVLRRLQQQH 79

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLS 152
           +  ++   D      G++ C  EV+  L+       ++ T+    L   LN  DK+    
Sbjct: 80  QAVASAAVD-----QGYSRCVQEVTHFLSKE-----QVKTQSQRRL---LNHFDKLQ--- 123

Query: 153 VRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSVWRPW 209
                     PS  +D      +  SS      T D +         P   ++WRPW
Sbjct: 124 ----------PSSDNDLREADFSLLSSTVQTSITKDKS---------PVHSALWRPW 161


>gi|148222948|ref|NP_001081972.1| hairy and enhancer of split 3, gene 1 [Xenopus laevis]
 gi|6665658|gb|AAF22959.1|AF146087_1 enhancer of split related epidermal protein-6 [Xenopus laevis]
          Length = 144

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 36  KPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLA 95
           KP++E+ RR RIN  +++L+ L+    Q    + SKLEKADILE+ V +LQ+ ++ Q   
Sbjct: 4   KPVIEKMRRDRINNSIEQLRILLERNFQTHHPH-SKLEKADILEMAVSYLQQQKKHQMNC 62

Query: 96  SN--PVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK 133
           S   P    D +  G+  C  E    L +     ++ G K
Sbjct: 63  SQLLPENAQDSYYQGYYMCLKETVGFLHTQEHGHIQEGNK 102


>gi|223648776|gb|ACN11146.1| Class B basic helix-loop-helix protein 2 [Salmo salar]
          Length = 409

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 20/103 (19%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--ATLGHLEKAVVLELTLKHVKALSTLLDQQQQ 113

Query: 93  RLAS--NPVTDADR-----------FRAGFTTCANEVSKCLAS 122
           ++ +  N +  +D+           FR GF  CA EV + LA+
Sbjct: 114 KIIALQNGMQISDQSSVSSENSEEMFRLGFHVCAKEVLQYLAN 156


>gi|21751034|dbj|BAC03890.1| unnamed protein product [Homo sapiens]
          Length = 308

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 12/127 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKML- 108

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRL 142
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    
Sbjct: 109 --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYA 166

Query: 143 NEMDKIS 149
           ++ +  S
Sbjct: 167 SQREAAS 173


>gi|297299644|ref|XP_001090360.2| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1 isoform 2 [Macaca mulatta]
          Length = 308

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 12/127 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKML- 108

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRL 142
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    
Sbjct: 109 --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYA 166

Query: 143 NEMDKIS 149
           ++ +  S
Sbjct: 167 SQREAAS 173


>gi|105990526|ref|NP_001035798.1| hairy/enhancer-of-split related with YRPW motif protein 1 isoform b
           [Homo sapiens]
          Length = 308

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 12/116 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKML- 108

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 109 --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 162


>gi|348510257|ref|XP_003442662.1| PREDICTED: class E basic helix-loop-helix protein 40-like isoform 1
           [Oreochromis niloticus]
          Length = 412

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 20/103 (19%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALSSLLEQQQQ 113

Query: 93  RL-------------ASNPVTDADRFRAGFTTCANEVSKCLAS 122
           ++               +  +  + FR+GF  CA EV   +AS
Sbjct: 114 KIIALQKDLQLGDHGGDSAESSEEMFRSGFHLCAKEVLHYMAS 156


>gi|291388168|ref|XP_002710698.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif 1
           [Oryctolagus cuniculus]
          Length = 308

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 12/127 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKML- 108

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRL 142
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    
Sbjct: 109 --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYA 166

Query: 143 NEMDKIS 149
           ++ +  S
Sbjct: 167 SQREAAS 173


>gi|355698046|gb|EHH28594.1| hypothetical protein EGK_19066, partial [Macaca mulatta]
          Length = 278

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 12/127 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 20  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKML- 78

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRL 142
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    
Sbjct: 79  --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYA 136

Query: 143 NEMDKIS 149
           ++ +  S
Sbjct: 137 SQREAAS 143


>gi|401712688|gb|AFP99077.1| HesC, partial [Ophiocoma wendtii]
          Length = 73

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 47  INRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNPVTDADRFR 106
           IN  L +LK L+   ++ E     KLEKADILE+TV+H+Q++++      N  T+  +F 
Sbjct: 1   INDSLLQLKSLVFPTIRKEIARHPKLEKADILEMTVRHIQELQKPSS-TGNDATNLSQFH 59

Query: 107 AGFTTCANEVSKCL 120
           AGF+ C +EVS+ L
Sbjct: 60  AGFSECLSEVSRFL 73


>gi|440903735|gb|ELR54357.1| Hairy/enhancer-of-split related with YRPW motif protein 1 [Bos
           grunniens mutus]
          Length = 308

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 12/116 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEKGSAKLEKAEILQMTVDHLKML- 108

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 109 --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 162


>gi|62006535|gb|AAX60145.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 93

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 26/108 (24%)

Query: 103 DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPP 162
           D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG +L +M +       ++D+   P
Sbjct: 11  DKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQ----EEEIIDMAEEP 66

Query: 163 PSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESMPSPKSVWRPW 209
                                V+  D   S+    E +   + VWRPW
Sbjct: 67  ---------------------VNLADQKRSKSPREEDIHHGEEVWRPW 93


>gi|62006513|gb|AAX60134.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 99

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 26/108 (24%)

Query: 103 DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPP 162
           D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG +L +M +       ++D+   P
Sbjct: 17  DKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQ----EEEIIDMAEEP 72

Query: 163 PSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESMPSPKSVWRPW 209
                                V+  D   S+    E +   + VWRPW
Sbjct: 73  ---------------------VNLADQKRSKSPREEDIHHGEEVWRPW 99


>gi|355779776|gb|EHH64252.1| hypothetical protein EGM_17425, partial [Macaca fascicularis]
          Length = 278

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 12/127 (9%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 20  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKML- 78

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRL 142
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL    
Sbjct: 79  --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYA 136

Query: 143 NEMDKIS 149
           ++ +  S
Sbjct: 137 SQREAAS 143


>gi|157428058|ref|NP_001098937.1| transcription factor HES-5 [Bos taurus]
 gi|148878467|gb|AAI46154.1| HES5 protein [Bos taurus]
 gi|296479034|tpg|DAA21149.1| TPA: hairy and enhancer of split 5 [Bos taurus]
          Length = 165

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L+  +     A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYLKHSKAFAAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 114

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 115 -KLLYHF 120


>gi|281341072|gb|EFB16656.1| hypothetical protein PANDA_017738 [Ailuropoda melanoleuca]
          Length = 308

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 12/116 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTAL--QAEGENVSKLEKADILELTVQHLQKMR 89
           RK  + ++E++RR RIN  L EL+ L+ +A   Q   +  +KLEKA+IL++TV HL+ + 
Sbjct: 50  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEKGSAKLEKAEILQMTVDHLKML- 108

Query: 90  RQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHL 138
                      DA     D    GF  C  EV++ L+   G+D    L  +L+SHL
Sbjct: 109 --HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHL 162


>gi|62006511|gb|AAX60133.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 97

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 26/108 (24%)

Query: 103 DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPP 162
           D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG +L +M +       ++D+   P
Sbjct: 15  DKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQ----EEEIIDMAEEP 70

Query: 163 PSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESMPSPKSVWRPW 209
                                V+  D   S+    E +   + VWRPW
Sbjct: 71  ---------------------VNLADQKRSKSPREEDIHHGEEVWRPW 97


>gi|62006397|gb|AAX60076.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006537|gb|AAX60146.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 94

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 26/108 (24%)

Query: 103 DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPP 162
           D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG +L +M +       ++D+   P
Sbjct: 12  DKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQ----EEEIIDMAEEP 67

Query: 163 PSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESMPSPKSVWRPW 209
                                V+  D   S+    E +   + VWRPW
Sbjct: 68  ---------------------VNLADQKRSKSPREEDIHHGEEVWRPW 94


>gi|157278355|ref|NP_001098280.1| Her7 [Oryzias latipes]
 gi|66393596|gb|AAY45947.1| Her7 [Oryzias latipes]
          Length = 201

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 45/205 (21%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVS---KLEKADILELTVQHLQKM 88
           RK++K  +E++RR R+NR L+ L+ +++     E   V+   ++EKA+ILE TV  LQK 
Sbjct: 14  RKLLKSQVEKRRRERMNRSLERLRTMLL----PEPHQVTPKHRVEKAEILEHTVIFLQKT 69

Query: 89  RRQQRLASNPVTDADRFRAGFTTCANEVSKCLAS-------TPGIDLRLGTKL------- 134
            ++Q  +    +    FR GF+TC    S+ L          P +D    T+L       
Sbjct: 70  TKEQTRSGQKQS----FRDGFSTCLRRASRFLGPQGKGLWLGPALDATFSTRLARSDFDS 125

Query: 135 ----------MSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQV 184
                     + H    L ++ + S   +R      PP        + P     + S   
Sbjct: 126 SGLQTRSFSSLQHTRSLLQKLRQKSKDRLRAQVFGAPPVQQSQARAAQPHRHERAASK-- 183

Query: 185 DTCDYTSQYKMYESMPSPKSVWRPW 209
              D ++Q     S P  +++WRPW
Sbjct: 184 ---DGSAQ-----SGPLSQTLWRPW 200


>gi|62006467|gb|AAX60111.1| enhancer of split mdelta protein [Drosophila melanogaster]
 gi|62006531|gb|AAX60143.1| enhancer of split mdelta protein [Drosophila melanogaster]
          Length = 95

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 26/108 (24%)

Query: 103 DRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLGQRLNEMDKISPLSVRVMDVCTPP 162
           D+FRAG+T  A EVS   ++ PG+DL+ GT LM  LG +L +M +       ++D+   P
Sbjct: 13  DKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQ----EEEIIDMAEEP 68

Query: 163 PSPHSDTYSMPLTPASSGSSQVDTCDYT-SQYKMYESMPSPKSVWRPW 209
                                V+  D   S+    E +   + VWRPW
Sbjct: 69  ---------------------VNLADQKRSKSPREEDIHHGEEVWRPW 95


>gi|426239826|ref|XP_004013819.1| PREDICTED: transcription factor HES-5 [Ovis aries]
          Length = 165

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 7/127 (5%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L+  +     A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYLKHSKAFAAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 114

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 115 -KLLYHF 120


>gi|402852689|ref|XP_003891048.1| PREDICTED: transcription factor HES-5 [Papio anubis]
          Length = 166

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFVAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHLGQRLNEMDKISPLSVRVMDVCTPP 162
            KL+ H  QR            +     TPP
Sbjct: 114 -KLLYHF-QRPPAAPPAPAKEPKAPGAATPP 142


>gi|17543564|ref|NP_500281.1| Protein LIN-22 [Caenorhabditis elegans]
 gi|2353800|gb|AAB68848.1| lin-22 [Caenorhabditis elegans]
 gi|351051318|emb|CCD83486.1| Protein LIN-22 [Caenorhabditis elegans]
          Length = 173

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 18 DIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADI 77
          +IE    ISR  + +   KP++E+KRRARIN+ L +LK +++          SK EKADI
Sbjct: 10 EIESDGGISRCKKIKN--KPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADI 67

Query: 78 LELTVQHLQKMRRQQ 92
          LE+ V++LQ++R  Q
Sbjct: 68 LEMAVEYLQQLRSAQ 82


>gi|395522220|ref|XP_003765137.1| PREDICTED: transcription factor HES-5 [Sarcophilus harrisii]
          Length = 165

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 4/88 (4%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN  +++LK L+    Q    N SKLEKADILE+TV +L   +  +
Sbjct: 21  KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEMTVSYL---KHSK 76

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCL 120
             AS P +    +  G++ C  E  + L
Sbjct: 77  AFASCPKSLQQDYSEGYSWCLKEAVQFL 104


>gi|170589165|ref|XP_001899344.1| Helix-loop-helix DNA-binding domain containing protein [Brugia
           malayi]
 gi|158593557|gb|EDP32152.1| Helix-loop-helix DNA-binding domain containing protein [Brugia
           malayi]
          Length = 107

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 44/59 (74%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR 90
           +K  KP++ERKRR RIN+CL E+K ++V  ++    +  K EKAD+LE++V +++++RR
Sbjct: 42  KKSNKPLIERKRRERINKCLFEMKQMLVDDVKNRSPSHFKWEKADVLEMSVAYIRQLRR 100


>gi|402588307|gb|EJW82240.1| helix-loop-helix DNA-binding domain-containing protein [Wuchereria
           bancrofti]
          Length = 257

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 17/89 (19%)

Query: 39  LERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQRLASNP 98
           +E++RRAR+N CLD+LK L+   L     + +KLEKADILE+TV +L +M+     + +P
Sbjct: 1   MEKRRRARMNECLDQLKHLL---LHISPNHRTKLEKADILEMTVAYLNQMQH----SPSP 53

Query: 99  VTDAD-------RFRAGFTTCANEVSKCL 120
            T  D        +  GFT  A   S CL
Sbjct: 54  STSFDSNAIYQQSYAEGFTVAA---SACL 79


>gi|156388218|ref|XP_001634598.1| predicted protein [Nematostella vectensis]
 gi|156221683|gb|EDO42535.1| predicted protein [Nematostella vectensis]
          Length = 170

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%), Gaps = 6/56 (10%)

Query: 36 KPMLERKRRARINRCLDELKDLMVTAL-----QAEGENVSKLEKADILELTVQHLQ 86
          KP+LER+RRARIN  L+ELK L++++L     QAE +N  K+EKA+ILELTV  L+
Sbjct: 23 KPLLERQRRARINHSLNELKTLVLSSLYQNCPQAE-QNCEKMEKAEILELTVNFLK 77


>gi|317418950|emb|CBN80988.1| Class B basic helix-loop-helix protein 2 [Dicentrarchus labrax]
          Length = 411

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 20/103 (19%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 56  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALSTLLEQQQQ 113

Query: 93  RL-------------ASNPVTDADRFRAGFTTCANEVSKCLAS 122
           ++               +  +  + FR+GF  CA EV   +AS
Sbjct: 114 KIIALQKDLQISDHGGDSAESSEEMFRSGFHLCAKEVLHYVAS 156


>gi|73956623|ref|XP_546734.2| PREDICTED: transcription factor HES-5 [Canis lupus familiaris]
          Length = 165

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 37/200 (18%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHSASDTQM- 113

Query: 132 TKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTP--ASSGSSQVDTCDY 189
            KL+ H  QR      + P          PPP          LTP  A++ +++  TC  
Sbjct: 114 -KLLYHF-QRPPAAPTV-PTKEPKATGTVPPPV---------LTPAKATAVAARQPTC-- 159

Query: 190 TSQYKMYESMPSPKSVWRPW 209
                          +WRPW
Sbjct: 160 --------------GLWRPW 165


>gi|327266079|ref|XP_003217834.1| PREDICTED: class E basic helix-loop-helix protein 40-like [Anolis
           carolinensis]
          Length = 420

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 20/130 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR------- 90
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +         
Sbjct: 65  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTNRIEQQQQ 122

Query: 91  -----QQRLASNPV------TDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
                Q+ L ++ +      +  + FR+GF  CA EV + +A          ++L+SHL 
Sbjct: 123 QILALQKGLHADELPPRSLDSSQEVFRSGFQMCAKEVLQYVAKHENAKELKSSQLISHLH 182

Query: 140 QRLNEMDKIS 149
           +  +E+ ++ 
Sbjct: 183 RVASEVLQVG 192


>gi|47225478|emb|CAG11961.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 301

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 14/122 (11%)

Query: 30  QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMR 89
           Q RK  + ++E++RR RIN  L EL+ L+ +A + +G   +KLEKA+IL++TV HL+ + 
Sbjct: 46  QARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLH 103

Query: 90  R---QQRLASNPVTDADRFRA-GFTTCANEVSKCLASTPG------IDLRLGTKLMSHLG 139
               +    ++ +  A  +R+ GF  C  E ++ L+   G      + +RL + L S+  
Sbjct: 104 ATCGKGYFEAHAL--AKDYRSLGFRECLAETARYLSMVEGRESADPLRMRLVSHLSSYAS 161

Query: 140 QR 141
           QR
Sbjct: 162 QR 163


>gi|395840835|ref|XP_003793257.1| PREDICTED: transcription factor HES-5 [Otolemur garnettii]
          Length = 159

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 114 -KLLYHF 119


>gi|6754182|ref|NP_034549.1| transcription factor HES-5 [Mus musculus]
 gi|3913838|sp|P70120.1|HES5_MOUSE RecName: Full=Transcription factor HES-5; AltName: Full=Hairy and
           enhancer of split 5
 gi|1491612|dbj|BAA06858.1| HES-5 [Mus musculus]
 gi|26352548|dbj|BAC39904.1| unnamed protein product [Mus musculus]
 gi|71121298|gb|AAH99864.1| Hairy and enhancer of split 5 (Drosophila) [Mus musculus]
 gi|71122359|gb|AAH99863.1| Hairy and enhancer of split 5 (Drosophila) [Mus musculus]
 gi|71122425|gb|AAH99865.1| Hairy and enhancer of split 5 (Drosophila) [Mus musculus]
 gi|73695418|gb|AAI03540.1| Hairy and enhancer of split 5 (Drosophila) [Mus musculus]
 gi|74228237|dbj|BAE23990.1| unnamed protein product [Mus musculus]
 gi|148683039|gb|EDL14986.1| hairy and enhancer of split 5 (Drosophila) [Mus musculus]
          Length = 167

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVEMLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 114 -KLLYHF 119


>gi|301627014|ref|XP_002942675.1| PREDICTED: transcription factor HES-1-like [Xenopus (Silurana)
           tropicalis]
 gi|66730713|gb|AAY51786.1| ESR4 [Xenopus (Silurana) tropicalis]
          Length = 243

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 12/100 (12%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           +++MKP++E++RR RIN+ L+ L+ L++ A   E     K EKADIL+ TV  L      
Sbjct: 25  KRLMKPVIEKRRRDRINQSLEHLRTLLLEATHDETLKNPKAEKADILKKTVHFL------ 78

Query: 92  QRLASNPV-TDADR----FRAGFTTCANEVSKCLASTPGI 126
            ++  NPV +D  +    F+ GF    N+ +  L S   I
Sbjct: 79  -KMCHNPVPSDGKKLLSGFKGGFREGLNQATSFLNSADSI 117


>gi|301608656|ref|XP_002933894.1| PREDICTED: transcription factor HES-5 [Xenopus (Silurana)
           tropicalis]
          Length = 160

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 4/111 (3%)

Query: 28  TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQK 87
           T Q  K+ KPM+E+ RR RIN  +++L++L+    Q    + SK EKADILEL V+ L++
Sbjct: 21  TKQKNKIRKPMVEKMRRDRINSSINQLQNLLEKEFQLLQPD-SKPEKADILELAVKFLKQ 79

Query: 88  MRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
               Q  + N   D   F  G++ C +E    L S    +  +  KLM+H 
Sbjct: 80  QICSQ--SKNNRKDYQDFSQGYSNCLHETFAFL-SFHRTEEEMQLKLMNHF 127


>gi|301608658|ref|XP_002933895.1| PREDICTED: transcription factor HES-5 [Xenopus (Silurana)
           tropicalis]
          Length = 159

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 11/113 (9%)

Query: 16  TVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKA 75
           T D     P S+T   R++ KP++E+ RR RIN  + +L+ L+    Q    N SKLEKA
Sbjct: 7   TQDCSMENPKSKT-SLRQIRKPVVEKMRRDRINSSIKQLRMLLEKEFQRHQPN-SKLEKA 64

Query: 76  DILELTVQHLQKMRRQQRLASNPVTDADR-----FRAGFTTCANEVSKCLAST 123
           DILE+TV +L    ++ +L  N V  A +     +  G++ C  E  + L+ T
Sbjct: 65  DILEMTVNYL----KEHQLQMNAVAFARKSPFQDYNQGYSRCLEETLQFLSHT 113


>gi|259155240|ref|NP_001158861.1| Class B basic helix-loop-helix protein 3 [Salmo salar]
 gi|223647742|gb|ACN10629.1| Class B basic helix-loop-helix protein 3 [Salmo salar]
          Length = 435

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 17/98 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++HL  +     ++ Q
Sbjct: 51  LIEKKRRDRINECIGQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHLNALTAVTEQQHQ 108

Query: 93  RLASN---------PV-TDADRFRAGFTTCANEVSKCL 120
           ++ +          P+  D D F +GF  CA EV + L
Sbjct: 109 KIMAFQNGDLSTKMPIRADLDAFHSGFQACAKEVLQYL 146


>gi|50754606|ref|XP_414439.1| PREDICTED: class E basic helix-loop-helix protein 40 [Gallus
           gallus]
          Length = 401

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 21/126 (16%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 59  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTALIEQQQQ 116

Query: 93  RL-------------ASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++             A +  +  + FR+GF  CA E+ + +A     +L+   +L+ HL 
Sbjct: 117 KILALQSGLQAGDLSARSLDSSQEMFRSGFQLCAKELLQYVAKHDNKELK-AAQLVGHLH 175

Query: 140 QRLNEM 145
           +   E+
Sbjct: 176 RVAAEL 181


>gi|74224355|dbj|BAE33752.1| unnamed protein product [Mus musculus]
          Length = 167

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVEMLSPKEKN----RLRKPVVEKVRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFAAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 114 -KLLYHF 119


>gi|307179321|gb|EFN67685.1| Hairy/enhancer-of-split related with YRPW motif protein 2
           [Camponotus floridanus]
          Length = 380

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 38/179 (21%)

Query: 7   ENQINM----INNTVDIEQLQPISRTYQ-YRKVMKPM----LERKRRARINRCLDELKDL 57
           +N +NM     N+ +DI    P  R  +   K   PM    +E++RR R+N CL +L  L
Sbjct: 7   DNILNMQYYPTNSHIDISVHSPSPRKRRCLNKEQDPMSHRIIEKRRRDRMNNCLADLSRL 66

Query: 58  MVTALQAEGENVSKLEKADILELTV---QHLQKMRRQQRLAS-NPV-------------- 99
           +      +G    ++EK +I+E+ +   +HLQ +R+  + +S  PV              
Sbjct: 67  IPAEYLKKGRG--RVEKTEIIEMAIRHMKHLQGLRQDTKHSSVTPVHTHPEDSVDSVSHS 124

Query: 100 ----TDADRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQRLNEM---DKIS 149
               T AD +R GF  C NE    L    G   R  L  +L +HL Q  +++   D++S
Sbjct: 125 TAASTAADHYRLGFQECLNETMHFLEEVEGFFARDTLCVQLYNHLQQHCDKIFANDRVS 183


>gi|147902310|ref|NP_001081974.1| hairy and enhancer of split 5, gene 2 [Xenopus laevis]
 gi|6665660|gb|AAF22960.1|AF146088_1 enhancer of split related protein-7 [Xenopus laevis]
          Length = 158

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 11/114 (9%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL--QKMRR 90
           K+ KP++E+ RR RIN  +++LK L+      +  NV KLEKADILE+TV +L  Q ++ 
Sbjct: 20  KLRKPVVEKMRRDRINSSIEQLKVLLENVFHKQQPNV-KLEKADILEMTVTYLRQQTLQL 78

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLA---STPGIDLRLGTKLMSHLGQR 141
           +  +  N     D ++ G++ C  EV   L+     P  +     KL+SH   +
Sbjct: 79  KSEIPHNNDIQMD-YKVGYSRCFEEVIDFLSLHQKQPETE----AKLISHFNSK 127


>gi|327269644|ref|XP_003219603.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif protein
           1-like isoform 2 [Anolis carolinensis]
          Length = 311

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 14/129 (10%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAE----GENVSKLEKADILELTVQHLQK 87
           RK  + ++E++RR RIN  L EL+ L+ +A + +        +KLEKA+IL++TV HL+ 
Sbjct: 51  RKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVIFFRGGSAKLEKAEILQMTVDHLKM 110

Query: 88  MRRQQRLASNPVTDA-----DRFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMSHLGQ 140
           +            DA     D    GF  C  EV++ L+   G+D    L  +L+SHL  
Sbjct: 111 L---HTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLSIIEGLDTADPLRVRLVSHLNN 167

Query: 141 RLNEMDKIS 149
             ++ +  S
Sbjct: 168 YASQREAAS 176


>gi|405965294|gb|EKC30676.1| Transcription factor HES-1 [Crassostrea gigas]
          Length = 331

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 8/114 (7%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENV---SKLEKADILELTVQHLQK- 87
           R+V KPM+ER+RR RIN CL++L+ L ++ L  +   +   +KLEKADILE+TV  +++ 
Sbjct: 24  RRVNKPMIERRRRERINECLNQLQTL-ISQLDKDKPKIGKSNKLEKADILEMTVDFVKRS 82

Query: 88  ---MRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHL 138
                +++      V D+ +++AG+  C NE+   L S+  +   + + L+ HL
Sbjct: 83  HPTTSKEEGENREGVVDSVQYKAGYDKCRNEIQNFLQSSENVPDEVRSALIRHL 136


>gi|313237733|emb|CBY12871.1| unnamed protein product [Oikopleura dioica]
          Length = 175

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 2/63 (3%)

Query: 29 YQYRK--VMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ 86
          YQ  K  + KP++E+KRR R+NR L+E+K++++  +  E    SKLEKADILE  V++L+
Sbjct: 7  YQIEKTAITKPLMEKKRRERMNRALNEMKNILLETMGREITCHSKLEKADILENAVEYLK 66

Query: 87 KMR 89
           +R
Sbjct: 67 LLR 69


>gi|47220423|emb|CAG03203.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 82

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 41/56 (73%)

Query: 30 QYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
          + RK MKP++E++RRARIN  L++LK+L++     +    SKLEKADILE+ V+ L
Sbjct: 27 ELRKTMKPLMEKRRRARINDSLNKLKNLIIPLTGRDKIRHSKLEKADILEMAVRFL 82


>gi|51832627|gb|AAU10470.1| hairy-related protein [Danio rerio]
          Length = 264

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 46/73 (63%)

Query: 25 ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
          +++T   ++ +KP++E+KRR RIN  LD L+DL+            KLEKA+IL+L VQ+
Sbjct: 9  MTKTEGIKRRLKPVIEKKRRDRINHNLDALRDLLFKNTADTRLQNPKLEKAEILDLAVQY 68

Query: 85 LQKMRRQQRLASN 97
          ++K  R+   A N
Sbjct: 69 IKKTIRKTETAKN 81


>gi|348507972|ref|XP_003441529.1| PREDICTED: class E basic helix-loop-helix protein 40-like isoform 1
           [Oreochromis niloticus]
          Length = 422

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 15/98 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 54  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALTSLLEQQQQ 111

Query: 93  RLAS--NPVTDADR------FRAGFTTCANEVSKCLAS 122
           ++ +  N +   D+      F +GF  CA E+ + LA+
Sbjct: 112 KILALQNGMQIGDQEKSEEMFCSGFHMCAKEILQYLAN 149


>gi|395536410|ref|XP_003770211.1| PREDICTED: transcription cofactor HES-6 [Sarcophilus harrisii]
          Length = 136

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 20/147 (13%)

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPV--TDADRFRAGFTTCANEVSKCLASTPGIDLR 129
           +E A++LELTV+ +Q + + + L S+ +    ++RF AG+  C +EV   +++ PGID  
Sbjct: 1   MENAEVLELTVKRVQGVLQSRSLESDKLHREASERFAAGYIQCMHEVHTFVSTCPGIDAA 60

Query: 130 LGTKLMSHLGQR--LNEMDKISPLSVRVM--DVCTPPPSPHSDTYSMPLTPASSGSSQVD 185
           +  +L++HL +   LNE      L   V+  D+C    S   +   + L+  +    +  
Sbjct: 61  IAAELLNHLLESMPLNEGAGFQALLGDVLGEDIC----SDLEEASEVELSQVAQDGPEPA 116

Query: 186 TCDYTSQYKMYESMPS---PKSVWRPW 209
            C       +   +PS    K +WRPW
Sbjct: 117 LC-------IPSGLPSSAVSKCMWRPW 136


>gi|256075246|ref|XP_002573931.1| basic helix-loop-helix transcription factor hes-related
           [Schistosoma mansoni]
          Length = 201

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 39/65 (60%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           R++ K M ERKRR RIN  LD L+ L++  L     +  KLEKADILEL V  L+K   Q
Sbjct: 87  RRMAKQMTERKRRDRINALLDNLRTLILKLLHKNPRHHRKLEKADILELVVSFLKKELNQ 146

Query: 92  QRLAS 96
            R  +
Sbjct: 147 NRFKT 151


>gi|47227346|emb|CAF96895.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 380

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 20/126 (15%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM-----RRQQ 92
           ++E+KRR RIN C+ +LKDL+   L+     +  LEKA +LELT++H++ +     ++QQ
Sbjct: 30  LIEKKRRDRINECIAQLKDLLPEHLKL--TTLGHLEKAVVLELTLKHVKALSSVLEQQQQ 87

Query: 93  RLAS-------------NPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTKLMSHLG 139
           ++ +                +  + FR+GF  CA EV + ++S         + +M H+ 
Sbjct: 88  KIVALQQDLQISDHRGDGAESSEEMFRSGFHLCAKEVLEYVSSQESSGDLTPSHVMGHIQ 147

Query: 140 QRLNEM 145
           +   E+
Sbjct: 148 KVAAEL 153


>gi|58219048|ref|NP_001010926.1| transcription factor HES-5 [Homo sapiens]
 gi|74745795|sp|Q5TA89.1|HES5_HUMAN RecName: Full=Transcription factor HES-5; AltName: Full=Class B
           basic helix-loop-helix protein 38; Short=bHLHb38;
           AltName: Full=Hairy and enhancer of split 5
 gi|82570711|gb|ABB83829.1| HES5 [Homo sapiens]
 gi|119576500|gb|EAW56096.1| hairy and enhancer of split 5 (Drosophila) [Homo sapiens]
          Length = 166

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFVAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 114 -KLLYHF 119


>gi|114550623|ref|XP_524847.2| PREDICTED: transcription factor HES-5 isoform 2 [Pan troglodytes]
 gi|426327521|ref|XP_004024566.1| PREDICTED: transcription factor HES-5 [Gorilla gorilla gorilla]
          Length = 165

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFVAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 114 -KLLYHF 119


>gi|296206531|ref|XP_002750255.1| PREDICTED: transcription factor HES-5 [Callithrix jacchus]
          Length = 162

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFVAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 114 -KLLYHF 119


>gi|195581416|ref|XP_002080530.1| GD10199 [Drosophila simulans]
 gi|194192539|gb|EDX06115.1| GD10199 [Drosophila simulans]
          Length = 180

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 2/63 (3%)

Query: 32  RKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQ 91
           RK  + ++E+KRR RIN  L ELK L+ +A + +G   +KLEKA+IL+LTV+HL+ ++ +
Sbjct: 101 RKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHLKTLQSK 158

Query: 92  QRL 94
            +L
Sbjct: 159 TQL 161


>gi|51468032|ref|NP_001003886.1| hairy-related 11 [Danio rerio]
 gi|34761798|gb|AAQ82052.1| Her11 [Danio rerio]
 gi|190337930|gb|AAI62354.1| Hairy-related 11 [Danio rerio]
 gi|190338667|gb|AAI62348.1| Hairy-related 11 [Danio rerio]
          Length = 274

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 46/73 (63%)

Query: 25 ISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQH 84
          +++T   ++ +KP++E+KRR RIN  LD L+DL+            KLEKA+IL+L VQ+
Sbjct: 9  MTKTEGIKRRLKPVIEKKRRDRINHNLDALRDLLFKNTADTRLQNPKLEKAEILDLAVQY 68

Query: 85 LQKMRRQQRLASN 97
          ++K  R+   A N
Sbjct: 69 IKKTIRKTETARN 81


>gi|348566905|ref|XP_003469242.1| PREDICTED: hairy and enhancer of split-related protein HELT-like
           [Cavia porcellus]
          Length = 241

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 14/83 (16%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKM--------R 89
           ++E++RR RINRCL+EL   + TAL    ++  KLEKA+ILE+TVQ+L+ +        R
Sbjct: 17  VIEKRRRDRINRCLNELGKTVPTALAK--QSSGKLEKAEILEMTVQYLRALHSADFPRGR 74

Query: 90  RQQRLASNPVTDADRFRAGFTTC 112
            ++ LA      A+ F  G+  C
Sbjct: 75  EKELLAEF----ANYFHYGYHEC 93


>gi|348551462|ref|XP_003461549.1| PREDICTED: transcription factor HES-5-like [Cavia porcellus]
          Length = 164

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 42/202 (20%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P +    +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFATAAGPKSLHRDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHLGQRLNEMDKISPLSVRVMDVCTPPPSPHSDTYSMPLTPASS----GSSQVDTC 187
            KL+ H  QR                   PP +P       P+  A+      SS+V   
Sbjct: 114 -KLLCHF-QR-------------------PPSAPTVPAKEGPMPGAAPLPARPSSKVSPA 152

Query: 188 DYTSQYKMYESMPSPKSVWRPW 209
                     + PS   +WRPW
Sbjct: 153 ----------ARPSACGLWRPW 164


>gi|156366345|ref|XP_001627099.1| predicted protein [Nematostella vectensis]
 gi|156213998|gb|EDO34999.1| predicted protein [Nematostella vectensis]
          Length = 481

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 22/129 (17%)

Query: 38  MLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRR-----QQ 92
           ++E++RR RIN CL EL  L+ +A   + +   KLEKA+ILELTV++++K  +     QQ
Sbjct: 52  VIEKRRRDRINSCLSELAQLIPSAQNGK-QGSGKLEKAEILELTVEYVKKNLQNPNQIQQ 110

Query: 93  RLASNPVTDAD--------------RFRAGFTTCANEVSKCLASTPGIDLR--LGTKLMS 136
                   + D              ++  G++ C  EV + L +   +D +     +LM+
Sbjct: 111 DGTDKGANEKDNNQHKPVVTMAELRKYWMGYSDCTAEVLRFLVAVEAMDPQQPCFQRLMA 170

Query: 137 HLGQRLNEM 145
           HL  R N M
Sbjct: 171 HLRHRHNLM 179


>gi|5359726|gb|AAD42782.1| bHLH-WRPW transcription factor ESR-5 [Xenopus laevis]
          Length = 203

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 2/98 (2%)

Query: 26  SRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL 85
           S T+  RK++KP++E++RR RINR L E++ L+      +     K+EKA+ILEL V ++
Sbjct: 7   SDTFPSRKILKPVVEKQRRDRINRSLGEMRILLFQLTGNQKLQNPKMEKAEILELAVIYI 66

Query: 86  QKMRRQQRLASNP-VTDADR-FRAGFTTCANEVSKCLA 121
           + + R +    N   + A++ + +GF  C +     ++
Sbjct: 67  RNVTRMKTHDPNKWASPAEKMYVSGFRECLDRTEDFIS 104


>gi|147903541|ref|NP_001089095.1| hairy and enhancer of split 5, gene 2 [Xenopus laevis]
 gi|62821751|dbj|BAD95801.1| enhancer of split related protein 3/7b [Xenopus laevis]
          Length = 159

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 11/111 (9%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHL--QKMRR 90
           K+ KP++E+ RR RIN  +++LK L+      +  NV KLEKADILE+TV +L  Q +R 
Sbjct: 20  KLRKPVVEKMRRDRINSSIEQLKVLLENVFHQQEPNV-KLEKADILEMTVTYLRQQTLRL 78

Query: 91  QQRLASNPVTDADRFRAGFTTCANEVSKCLA---STPGIDLRLGTKLMSHL 138
           +  +  N     + ++ G++ C  EV   L+     P  +     KL+SH 
Sbjct: 79  KGEIPHNNNIQME-YKDGYSRCFEEVIDFLSLHQKQPEAE----AKLISHF 124


>gi|444525991|gb|ELV14243.1| Transcription factor HES-5 [Tupaia chinensis]
          Length = 168

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 8/127 (6%)

Query: 12  MINNTVDIEQLQPISRTYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSK 71
           M  +TV +E L P  +     ++ KP++E+ RR RIN  +++LK L+         N SK
Sbjct: 1   MAPSTVAVELLSPKEKN----RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SK 55

Query: 72  LEKADILELTVQHLQKMRRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLG 131
           LEKADILE+ V +L K  +    A+ P      +  G++ C  E  + L      D ++ 
Sbjct: 56  LEKADILEMAVSYL-KHSKAFAAAAGPKNLHQDYSEGYSWCLQEAVQFLTLHAASDTQM- 113

Query: 132 TKLMSHL 138
            KL+ H 
Sbjct: 114 -KLLYHF 119


>gi|440908598|gb|ELR58601.1| Transcription factor HES-3, partial [Bos grunniens mutus]
          Length = 80

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)

Query: 28 TYQYRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQK 87
          T  +RKV KP++E+KRRARIN  L++LK L+      +     KLEKADILEL+V++++ 
Sbjct: 15 TGNFRKVSKPLMEKKRRARINVSLEQLKSLLEKHYSHQIRK-RKLEKADILELSVKYMKS 73

Query: 88 MR 89
          ++
Sbjct: 74 LQ 75


>gi|113931432|ref|NP_001039166.1| transcription factor HES-7.1 [Xenopus (Silurana) tropicalis]
 gi|123913113|sp|Q28HA8.1|HES71_XENTR RecName: Full=Transcription factor HES-7.1; AltName: Full=Hairy and
           enhancer of split 7.1
 gi|89272824|emb|CAJ82070.1| Helix-loop-helix DNA-binding domain protein with Hairy Orange
           domain, similar to hes7 [Xenopus (Silurana) tropicalis]
          Length = 178

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 24/184 (13%)

Query: 31  YRKVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQ--KM 88
           +RK++KP++ER+RR RIN  L++L+  +  AL++E     K+EKA+ILE TVQ LQ  K+
Sbjct: 13  HRKLLKPLVERRRRERINNSLEKLRIFLSQALKSEKLKNPKVEKAEILECTVQFLQSSKL 72

Query: 89  RRQQRLASNPVTDADRFRAGFTTCANEVSKCLASTPGIDLRLGTK-LMSHLGQRLNEMDK 147
             Q     N       +++GF  C       + S P  DL + TK  +SH      ++  
Sbjct: 73  VPQDGDVGN-----KGYQSGFQHCLETALHFMNSKP--DLNVATKDFLSH------QLSS 119

Query: 148 ISPLSVRVMDVCTPPPSPHSDTYSMPLTPASSGSSQVDTCDYTSQYKMYESMPSPKSV-- 205
             P +       TP P+P S  Y       SS     +T   +    + +   SP++   
Sbjct: 120 YKPPAEAWSPTDTPKPTP-SIGYQDSAPHLSS-----NTISVSPTKTLVDGQFSPQTFQT 173

Query: 206 WRPW 209
           WRPW
Sbjct: 174 WRPW 177


>gi|33504529|ref|NP_878295.1| hairy and enhancer of split-related 15.1 [Danio rerio]
 gi|326672029|ref|XP_003199574.1| PREDICTED: transcription factor HES-5-like [Danio rerio]
 gi|31074173|gb|AAP41832.1| hairy and enhancer of split 5 [Danio rerio]
 gi|47112752|gb|AAT11018.1| Her15 [Danio rerio]
 gi|124481600|gb|AAI33129.1| Hairy and enhancer of split 5 (Drosophila) [Danio rerio]
          Length = 149

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 8/89 (8%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN C+++LK ++    Q +  N +KLEKADILE+TV  L++  R  
Sbjct: 19  KLRKPVVEKMRRDRINNCIEQLKSMLEKEFQQQDPN-AKLEKADILEMTVVFLKQQLR-- 75

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLA 121
                P T  +    G++ C  E    L+
Sbjct: 76  -----PKTPQNAQIEGYSQCWRETISFLS 99


>gi|157743312|ref|NP_001099062.1| hairy and enhancer of split-related 15.2 [Danio rerio]
 gi|157423437|gb|AAI53647.1| Zgc:136520 protein [Danio rerio]
          Length = 149

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 8/89 (8%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           K+ KP++E+ RR RIN C+++LK ++    Q +  N +KLEKADILE+TV  L++  R  
Sbjct: 19  KLRKPVVEKMRRDRINNCIEQLKSMLEKEFQQQDPN-AKLEKADILEMTVVFLKQQLR-- 75

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLA 121
                P T  +    G++ C  E    L+
Sbjct: 76  -----PKTPQNAQIEGYSQCWRETISFLS 99


>gi|410899667|ref|XP_003963318.1| PREDICTED: transcription factor HES-5-like [Takifugu rubripes]
          Length = 160

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 8/90 (8%)

Query: 33  KVMKPMLERKRRARINRCLDELKDLMVTALQAEGENVSKLEKADILELTVQHLQKMRRQQ 92
           ++ KP++E+ RR RIN C+D+LK ++      +  N SKLEKADILE+TV  L    RQQ
Sbjct: 22  RLRKPVVEKMRRDRINSCIDQLKVILEKEFHKQEPN-SKLEKADILEMTVSFL----RQQ 76

Query: 93  RLASNPVTDADRFRAGFTTCANEVSKCLAS 122
                P      +  G+T C  +    L++
Sbjct: 77  L---QPSLCGSSYSPGYTHCWRDSPHFLSA 103


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.129    0.377 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,052,531,979
Number of Sequences: 23463169
Number of extensions: 112870901
Number of successful extensions: 402431
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 848
Number of HSP's that attempted gapping in prelim test: 399785
Number of HSP's gapped (non-prelim): 1763
length of query: 209
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 73
effective length of database: 9,168,204,383
effective search space: 669278919959
effective search space used: 669278919959
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)