BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3621
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q14019|COTL1_HUMAN Coactosin-like protein OS=Homo sapiens GN=COTL1 PE=1 SV=3
Length = 142
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 53/94 (56%)
Query: 4 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 63
T +D ++ ++AY VR D S W FKY S I +G + F Q D R F +
Sbjct: 2 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 61
Query: 64 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKTG 97
+R TGD MS+R KF LITW+G V +QRAKTG
Sbjct: 62 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTG 95
>sp|Q2HJ57|COTL1_BOVIN Coactosin-like protein OS=Bos taurus GN=COTL1 PE=2 SV=3
Length = 142
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%)
Query: 4 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 63
T +D ++ ++AY VR D+S W FKY S I +G + F Q D R F +
Sbjct: 2 ATKIDKEACRTAYNLVRDDSSAVIWVTFKYDGSTIVPGEQGAEYQDFIQQCTDDVRLFAF 61
Query: 64 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKTG 97
+R TGD MS+R KF LITW+G V +QRAKTG
Sbjct: 62 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTG 95
>sp|B0BNA5|COTL1_RAT Coactosin-like protein OS=Rattus norvegicus GN=Cotl1 PE=1 SV=1
Length = 142
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%)
Query: 4 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 63
T +D ++ ++AY VR D S W FKY + I +G + F Q D R F +
Sbjct: 2 ATKIDKEACRAAYNLVRDDGSSVIWVTFKYDGATIVPGDQGADYQHFIQQCTDDVRLFAF 61
Query: 64 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKTG 97
+R TGD MS+R KF LITW+G +V +QRAKTG
Sbjct: 62 VRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTG 95
>sp|Q9CQI6|COTL1_MOUSE Coactosin-like protein OS=Mus musculus GN=Cotl1 PE=1 SV=3
Length = 142
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%)
Query: 4 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 63
T +D ++ ++AY VR D S W F+Y + I +G + F Q D R F +
Sbjct: 2 ATKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVPGDQGADYQHFIQQCTDDVRLFAF 61
Query: 64 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKTG 97
+R TGD MS+R KF LITW+G +V +QRAKTG
Sbjct: 62 VRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTG 95
>sp|P34121|COAA_DICDI Coactosin OS=Dictyostelium discoideum GN=coaA PE=1 SV=1
Length = 146
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 7 LDSKSIKSAYEDVRSDASQTQWAVFKYQD-SKISCTARGQS-FDKFRAQF-RPDERSFGY 63
+ S +K+AY++V +D++ T W +FKY+ +KI + +G F + + +P ER + Y
Sbjct: 4 VSSTELKAAYDEVLADSNDTNWCLFKYEGKNKIVLSGKGSGGFAELAQEINQPSERLYAY 63
Query: 64 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAK 95
LR+++GD+ S+R KF+ I+W G EVG + +A
Sbjct: 64 LRVVSGDDESKRSKFVFISWCGEEVGPLAKAN 95
>sp|Q9P7E8|APP1_SCHPO Protein app1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=app1 PE=2 SV=1
Length = 857
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 5 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSK---ISCTARGQSFDKFRAQFRPDERSF 61
T+ I++ YE V S A WA+F Y+ + + A G D+F +F + F
Sbjct: 7 TSTHGAEIRNVYEKVLSGADDCSWAIFGYEKGQGNILKVVASGNDNDEFLDEFDENAVLF 66
Query: 62 GYLRMMTGDEMSRRLKFLLITWVG 85
G+LR+ D + KF+L+ W G
Sbjct: 67 GFLRVK--DVNTGLNKFVLVCWCG 88
>sp|A6H7G2|DBNL_BOVIN Drebrin-like protein OS=Bos taurus GN=DBNL PE=2 SV=1
Length = 423
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 11 SIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGYLRM 66
++ AY+ V ++ S T WA+F Y+ D +++ T G ++ + + + + R+
Sbjct: 11 ALLEAYQQVVNEKSSTDWALFTYEGNSNDIRVAGTGEG-GLEEMVEELNSGKVMYAFCRV 69
Query: 67 MTGDEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFLLITWVGCEVGVIQRAKVSI 126
D S KF+LI W G V +++ + +S FL G V + RA+ +
Sbjct: 70 K--DPNSGLPKFVLINWTGEGVNDVRKGACANHVSTMAGFL----KGAHVTINARAEEDV 123
Query: 127 D 127
+
Sbjct: 124 E 124
>sp|Q07266|DREB_RAT Drebrin OS=Rattus norvegicus GN=Dbn1 PE=2 SV=3
Length = 707
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 14 SAYEDVRSDASQTQWAVFKYQDS----KISCTARGQSFDKFRAQFRPDERSFGYLRMMTG 69
+AYE+V + S WA++ Y+D K++ + G + F + +G+ +
Sbjct: 15 AAYEEVIREESAADWALYTYEDGSDDLKLAASGEG-GLQELSGHFENQKVMYGFCSVK-- 71
Query: 70 DEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFL 107
D + K++LI WVG +V ++ +++ +F
Sbjct: 72 DSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFF 109
>sp|Q9QXS6|DREB_MOUSE Drebrin OS=Mus musculus GN=Dbn1 PE=1 SV=4
Length = 706
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 14 SAYEDVRSDASQTQWAVFKYQDS----KISCTARGQSFDKFRAQFRPDERSFGYLRMMTG 69
+AYE+V + S WA++ Y+D K++ + G + F + +G+ +
Sbjct: 15 AAYEEVIREESAADWALYTYEDGSDDLKLAASGEG-GLQELSGHFENQKVMYGFCSVK-- 71
Query: 70 DEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFL 107
D + K++LI WVG +V ++ +++ +F
Sbjct: 72 DSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFF 109
>sp|Q16643|DREB_HUMAN Drebrin OS=Homo sapiens GN=DBN1 PE=1 SV=4
Length = 649
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 14 SAYEDVRSDASQTQWAVFKYQDS----KISCTARGQSFDKFRAQFRPDERSFGYLRMMTG 69
+AYE+V + S WA++ Y+D K++ + G + F + +G+ +
Sbjct: 15 AAYEEVIREESAADWALYTYEDGSDDLKLAASGEG-GLQELSGHFENQKVMYGFCSVK-- 71
Query: 70 DEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFL 107
D + K++LI WVG +V ++ +++ +F
Sbjct: 72 DSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFF 109
>sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1
Length = 430
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 11 SIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGYLRM 66
+++ AY V ++ S T WA+F Y+ D +++ T G ++ + + + + R+
Sbjct: 11 ALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEG-GLEEMVEELNSGKVMYAFCRV 69
Query: 67 MTGDEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFLLITWVGCEVGVIQRAKVSI 126
D S KF+LI W G V +++ +S FL G V + RA+ +
Sbjct: 70 K--DPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFL----KGAHVTINARAEEDV 123
Query: 127 D 127
+
Sbjct: 124 E 124
>sp|Q6GM14|DBNLB_XENLA Drebrin-like protein B OS=Xenopus laevis GN=dbnl-b PE=2 SV=1
Length = 376
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 8 DSKSIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGY 63
+ ++++AY+DV + ++T WA++ Y+ D +++ T G ++ + + + +
Sbjct: 8 NGAALQAAYKDVLDEKTKTDWALYTYEGNSNDIRLAETGDG-GLEELVEELSSGKVMYAF 66
Query: 64 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFLLITWVGCEVGVIQRAK 123
R+ D S KF+LI W G V ++ + +S FL G V + RA+
Sbjct: 67 CRVK--DPNSGLPKFVLINWTGEGVKDARKGMCANHVSTMASFLK----GAHVTINARAE 120
Query: 124 VSID 127
++
Sbjct: 121 EDVE 124
>sp|Q7ZXQ9|DBNLA_XENLA Drebrin-like protein A OS=Xenopus laevis GN=dbnl-a PE=2 SV=1
Length = 447
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 8 DSKSIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGY 63
+ +++ AY+DV + ++T WA++ Y+ D +++ T G ++ + + + +
Sbjct: 8 NGAALQGAYKDVLDEKTKTDWALYTYEGNSNDIRLAETGDG-GLEELVEELSSGKVMYAF 66
Query: 64 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFLLITWVGCEVGVIQRAK 123
R+ D S KF+L+ W G V ++ + +S FL G V + RA+
Sbjct: 67 CRVK--DPNSGLPKFVLVNWTGEGVKDARKGACANHVSTMANFL----KGAHVTINARAE 120
Query: 124 VSID 127
++
Sbjct: 121 EDVE 124
>sp|Q9VU84|DBNL_DROME Drebrin-like protein OS=Drosophila melanogaster GN=CG10083 PE=1
SV=1
Length = 531
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 12 IKSAYEDVRSDASQTQWAVFKY--QDSKISCTARGQ-SFDKFRAQFRPDERSFGYLRMMT 68
I +A++DV D S T W++F Y Q +++ A G D+ + + ++R+
Sbjct: 12 IVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYAFVRIE- 70
Query: 69 GDEMSRRLKFLLITWVGCEVGVIQRAKTGDEM 100
D + K+LLI W G V+++ + +
Sbjct: 71 -DPKTGLNKYLLINWQGEGAPVLRKGTCANHI 101
>sp|Q9JHL4|DBNL_RAT Drebrin-like protein OS=Rattus norvegicus GN=Dbnl PE=1 SV=1
Length = 436
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 11 SIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGYLRM 66
+++ AY V ++ S T WA+F Y+ D +++ T G ++ + + + + R+
Sbjct: 11 ALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGL-EELVEELNSGKVMYAFCRV 69
Query: 67 MTGDEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFLLITWVGCEVGVIQRAKVSI 126
D S KF+LI W G V +++ + +S FL G V + RA+ +
Sbjct: 70 K--DPNSGLPKFVLINWTGEGVNDVRKGACANHVSTMANFL----KGAHVTINARAEEDV 123
Query: 127 D 127
+
Sbjct: 124 E 124
>sp|Q62418|DBNL_MOUSE Drebrin-like protein OS=Mus musculus GN=Dbnl PE=1 SV=2
Length = 436
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 11 SIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGYLRM 66
+++ AY V ++ S T WA+F Y+ D +++ T G ++ + + + + R+
Sbjct: 11 ALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGL-EELVEELNSGKVMYAFCRV 69
Query: 67 MTGDEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKFLLITWVGCEVGVIQRAKVSI 126
D S KF+LI W G V +++ + +S FL G V + RA+ +
Sbjct: 70 K--DPNSGLPKFVLINWTGEGVNDVRKGACANHVSTMANFL----KGAHVTINARAEEDV 123
Query: 127 D 127
+
Sbjct: 124 E 124
>sp|A4G3S6|SYM_HERAR Methionine--tRNA ligase OS=Herminiimonas arsenicoxydans GN=metG
PE=3 SV=1
Length = 710
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 47 FDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKF 106
F ++ ++P++ G L +M + R++KF G G++ A DE S +
Sbjct: 643 FSGIKSAYQPEDL-IGKLTVMVANLAPRKMKF------GISEGMVLAASAADEKSNPGIY 695
Query: 107 LLITWVGCEVGV 118
+L W G E G+
Sbjct: 696 ILNPWPGAEPGM 707
>sp|B8IZT3|RSMH_DESDA Ribosomal RNA small subunit methyltransferase H OS=Desulfovibrio
desulfuricans (strain ATCC 27774 / DSM 6949) GN=rsmH
PE=3 SV=1
Length = 327
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 49 KFRAQFRPDERSFGYLRMMTGDEMSRRLKFL--LITW--VGCEVGVIQRAKTGDEMSRRL 104
+ +A+ P R+F LRM DE+ +FL ++TW +G + VI D M +
Sbjct: 205 RAKARRHPATRTFQALRMAVNDELGELRRFLDQILTWLPIGGRLAVITFHSLEDRM---V 261
Query: 105 KFLLITWV-GC 114
K + WV GC
Sbjct: 262 KQAMRHWVEGC 272
>sp|B2IB12|ACSA_BEII9 Acetyl-coenzyme A synthetase OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=acsA PE=3
SV=1
Length = 645
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 61 FGYLRMMTGDEMSRRLKFLLITWVGCEVGVI 91
+ Y+ +M G E S RL+ L+TWV ++G I
Sbjct: 558 YAYVTLMNGIEPSDRLRTELVTWVRKDIGPI 588
>sp|A6SX05|SYM_JANMA Methionine--tRNA ligase OS=Janthinobacterium sp. (strain Marseille)
GN=metG PE=3 SV=1
Length = 700
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 47 FDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKTGDEMSRRLKF 106
F ++ ++P++ G L +M + R++KF G G++ A DE + +
Sbjct: 633 FSGIKSAYKPEDL-IGKLTVMVANLAPRKMKF------GISEGMVLAASAADEKANPGIY 685
Query: 107 LLITWVGCEVGV 118
+L W G E G+
Sbjct: 686 ILNPWPGAEPGM 697
>sp|P54854|HXT15_YEAST Hexose transporter HXT15 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HXT15 PE=1 SV=1
Length = 567
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 60 SFGYLRMMTGDEMSRRLKFLLITW---VGCEVGVIQRAKTGDEMSRRLKFLLITWVGCEV 116
+FG + TG+ ++ L+ VGC +G + A+ D + RRL +++ V
Sbjct: 93 NFGSYKHSTGEYYLSNVRMGLLVAMFSVGCSIGGVAFARLADTLGRRLAIVIVVLVYMVG 152
Query: 117 GVIQ 120
+IQ
Sbjct: 153 AIIQ 156
>sp|P47185|HXT16_YEAST Hexose transporter HXT16 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HXT16 PE=3 SV=1
Length = 567
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 60 SFGYLRMMTGDEMSRRLKFLLITW---VGCEVGVIQRAKTGDEMSRRLKFLLITWVGCEV 116
+FG + TG+ ++ L+ VGC +G + A+ D + RRL +++ V
Sbjct: 93 NFGSYKHSTGEYYLSNVRMGLLVAMFSVGCSIGGVAFARLADTLGRRLAIVIVVLVYMVG 152
Query: 117 GVIQ 120
+IQ
Sbjct: 153 AIIQ 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,847,552
Number of Sequences: 539616
Number of extensions: 1532775
Number of successful extensions: 3580
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3558
Number of HSP's gapped (non-prelim): 32
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)