Query psy3624
Match_columns 1010
No_of_seqs 455 out of 3504
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 21:28:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3624.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3624hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0203|consensus 100.0 2E-172 5E-177 1427.4 52.0 999 11-1010 18-1019(1019)
2 KOG0202|consensus 100.0 6E-157 1E-161 1308.4 66.1 920 30-1001 2-971 (972)
3 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-151 3E-156 1414.1 103.7 988 22-1010 7-997 (997)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-141 4E-146 1316.1 96.6 915 31-1001 6-1050(1053)
5 KOG0204|consensus 100.0 6E-142 1E-146 1185.4 64.6 880 35-994 101-1004(1034)
6 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-134 4E-139 1249.5 96.7 865 30-999 2-883 (884)
7 COG0474 MgtA Cation transport 100.0 5E-135 1E-139 1248.1 85.6 882 26-994 17-912 (917)
8 PRK15122 magnesium-transportin 100.0 1E-132 3E-137 1224.7 92.4 859 29-1004 24-903 (903)
9 PRK10517 magnesium-transportin 100.0 2E-132 5E-137 1220.2 93.4 841 31-1004 48-902 (902)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 4E-131 1E-135 1227.1 96.5 876 35-995 42-938 (941)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 7E-131 1E-135 1209.3 94.8 841 31-1003 14-867 (867)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 5E-126 1E-130 1177.0 91.3 872 81-997 1-917 (917)
13 TIGR01647 ATPase-IIIA_H plasma 100.0 7E-117 2E-121 1072.1 86.2 751 51-956 1-753 (755)
14 TIGR01657 P-ATPase-V P-type AT 100.0 4E-117 8E-122 1111.9 76.7 842 49-973 137-1046(1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 3E-104 6E-109 999.5 67.3 875 64-1001 1-1049(1057)
16 PLN03190 aminophospholipid tra 100.0 4E-99 9E-104 938.4 75.8 773 63-860 86-1041(1178)
17 KOG0208|consensus 100.0 9.2E-97 2E-101 835.2 57.7 847 49-973 158-1096(1140)
18 KOG0205|consensus 100.0 3E-92 6.5E-97 762.4 39.7 676 31-813 17-698 (942)
19 PRK14010 potassium-transportin 100.0 1.9E-88 4.2E-93 793.0 61.6 555 84-783 29-589 (673)
20 PRK01122 potassium-transportin 100.0 5E-86 1.1E-90 773.5 63.7 549 84-772 30-582 (679)
21 KOG0206|consensus 100.0 1.3E-86 2.8E-91 794.3 27.6 776 60-860 28-964 (1151)
22 KOG0210|consensus 100.0 1.8E-85 3.8E-90 713.1 33.2 866 59-1006 74-1048(1051)
23 TIGR01497 kdpB K+-transporting 100.0 1.4E-81 3E-86 733.9 62.5 555 84-778 29-589 (675)
24 KOG0209|consensus 100.0 1.4E-77 3E-82 663.5 50.5 871 33-1000 146-1152(1160)
25 COG2217 ZntA Cation transport 100.0 2.6E-76 5.5E-81 690.4 56.5 501 120-775 175-677 (713)
26 PRK11033 zntA zinc/cadmium/mer 100.0 2.7E-73 5.9E-78 688.5 58.0 496 120-775 207-706 (741)
27 TIGR01494 ATPase_P-type ATPase 100.0 3.5E-72 7.6E-77 659.2 54.0 473 127-778 4-482 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 9.8E-72 2.1E-76 660.8 53.6 507 118-775 17-525 (556)
29 KOG0207|consensus 100.0 3.5E-72 7.7E-77 637.0 42.6 542 121-809 343-899 (951)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.4E-70 3.1E-75 646.2 54.7 488 118-776 17-505 (536)
31 PRK10671 copA copper exporting 100.0 4.8E-69 1E-73 666.0 60.7 500 122-775 289-790 (834)
32 TIGR01511 ATPase-IB1_Cu copper 100.0 2.5E-69 5.4E-74 637.4 55.1 491 118-775 53-544 (562)
33 COG2216 KdpB High-affinity K+ 100.0 1.5E-59 3.2E-64 498.4 34.3 535 86-757 31-569 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.8E-35 3.9E-40 313.5 20.9 226 125-355 2-230 (230)
35 KOG4383|consensus 100.0 5.9E-27 1.3E-31 255.1 28.5 500 496-1007 698-1340(1354)
36 PF00689 Cation_ATPase_C: Cati 99.9 2.8E-24 6E-29 218.8 16.2 180 786-995 1-182 (182)
37 PF00702 Hydrolase: haloacid d 99.8 4.1E-21 8.9E-26 201.8 11.0 97 569-716 115-215 (215)
38 COG4087 Soluble P-type ATPase 99.5 4.1E-14 8.8E-19 125.0 10.1 118 570-739 19-138 (152)
39 PF13246 Hydrolase_like2: Puta 99.4 3.6E-13 7.7E-18 118.4 8.5 89 416-508 1-91 (91)
40 PF00690 Cation_ATPase_N: Cati 99.4 3.2E-13 6.9E-18 112.4 7.3 69 32-100 1-69 (69)
41 PRK10513 sugar phosphate phosp 99.4 1.7E-12 3.8E-17 141.2 15.2 68 683-751 195-266 (270)
42 COG0561 Cof Predicted hydrolas 99.4 2.7E-12 5.8E-17 139.1 14.2 170 581-751 20-259 (264)
43 PRK10976 putative hydrolase; P 99.4 3.8E-12 8.3E-17 138.1 14.3 171 580-751 18-262 (266)
44 PRK01158 phosphoglycolate phos 99.4 4.8E-12 1E-16 134.3 14.3 166 581-751 20-227 (230)
45 PRK15126 thiamin pyrimidine py 99.4 2.2E-12 4.8E-17 140.4 11.8 171 580-751 18-260 (272)
46 PLN02887 hydrolase family prot 99.3 1.9E-11 4E-16 143.0 15.3 67 684-751 507-577 (580)
47 TIGR01487 SPP-like sucrose-pho 99.3 2.2E-11 4.9E-16 127.4 13.3 165 581-749 18-215 (215)
48 PRK10530 pyridoxal phosphate ( 99.3 2.9E-11 6.2E-16 131.9 14.3 68 683-751 198-269 (272)
49 TIGR01482 SPP-subfamily Sucros 99.3 5.1E-11 1.1E-15 125.9 15.5 165 581-750 15-222 (225)
50 PF08282 Hydrolase_3: haloacid 99.2 8E-11 1.7E-15 126.8 13.3 170 579-749 13-254 (254)
51 TIGR00099 Cof-subfamily Cof su 99.1 2.4E-10 5.2E-15 123.3 12.6 169 580-749 15-256 (256)
52 smart00831 Cation_ATPase_N Cat 99.1 2.5E-10 5.5E-15 93.6 7.1 61 43-103 2-62 (64)
53 PRK03669 mannosyl-3-phosphogly 99.1 9.9E-10 2.2E-14 119.2 13.3 164 581-751 24-266 (271)
54 TIGR01486 HAD-SF-IIB-MPGP mann 99.1 1.8E-09 3.9E-14 116.3 14.7 68 683-751 175-254 (256)
55 TIGR02137 HSK-PSP phosphoserin 99.1 1E-09 2.2E-14 112.6 11.5 131 581-752 68-198 (203)
56 TIGR02726 phenyl_P_delta pheny 99.1 7.8E-10 1.7E-14 109.1 10.3 106 588-747 41-148 (169)
57 PRK11133 serB phosphoserine ph 99.0 1.2E-09 2.6E-14 119.6 11.9 131 581-750 181-316 (322)
58 PRK00192 mannosyl-3-phosphogly 98.9 4.9E-09 1.1E-13 113.9 12.5 67 684-751 190-268 (273)
59 TIGR01670 YrbI-phosphatas 3-de 98.9 5.8E-09 1.3E-13 102.4 11.2 106 589-750 36-146 (154)
60 TIGR02471 sucr_syn_bact_C sucr 98.9 1.1E-08 2.4E-13 108.7 13.0 68 683-751 158-233 (236)
61 COG0560 SerB Phosphoserine pho 98.8 3.8E-08 8.3E-13 101.4 11.7 122 580-739 76-201 (212)
62 TIGR00338 serB phosphoserine p 98.8 3.8E-08 8.3E-13 103.4 11.6 129 581-748 85-218 (219)
63 TIGR01485 SPP_plant-cyano sucr 98.7 1.7E-07 3.6E-12 100.5 14.2 171 579-751 19-245 (249)
64 PRK09484 3-deoxy-D-manno-octul 98.7 6.9E-08 1.5E-12 97.8 10.4 102 588-745 55-160 (183)
65 COG1778 Low specificity phosph 98.7 1.2E-07 2.7E-12 87.9 9.8 116 588-759 42-165 (170)
66 PRK08238 hypothetical protein; 98.6 9.2E-06 2E-10 94.0 26.9 93 581-722 72-165 (479)
67 PLN02382 probable sucrose-phos 98.6 3.1E-07 6.7E-12 104.7 14.6 169 581-751 28-258 (413)
68 PRK13582 thrH phosphoserine ph 98.4 1.8E-06 3.8E-11 89.7 11.2 127 581-750 68-196 (205)
69 TIGR02461 osmo_MPG_phos mannos 98.4 1.8E-06 3.8E-11 90.6 10.7 44 579-622 13-56 (225)
70 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 1.8E-06 3.8E-11 89.4 10.6 117 581-734 80-200 (201)
71 KOG1615|consensus 98.3 1E-06 2.2E-11 84.7 6.8 110 581-722 88-199 (227)
72 PRK14502 bifunctional mannosyl 98.2 2.2E-05 4.7E-10 92.1 14.5 41 581-621 433-473 (694)
73 PTZ00174 phosphomannomutase; P 98.1 6.7E-06 1.5E-10 87.8 9.0 54 683-737 187-245 (247)
74 PRK10187 trehalose-6-phosphate 98.1 1.7E-05 3.8E-10 85.3 11.5 160 581-749 36-240 (266)
75 TIGR02463 MPGP_rel mannosyl-3- 98.1 2.2E-05 4.7E-10 82.6 12.0 40 582-621 17-56 (221)
76 TIGR03333 salvage_mtnX 2-hydro 98.1 2.3E-05 5E-10 81.8 11.1 112 580-722 69-182 (214)
77 PLN02954 phosphoserine phospha 98.1 3.7E-05 8E-10 81.1 12.7 133 581-747 84-221 (224)
78 PRK12702 mannosyl-3-phosphogly 98.0 4.5E-05 9.7E-10 80.5 12.4 43 580-622 17-59 (302)
79 PF12710 HAD: haloacid dehalog 98.0 1.7E-05 3.6E-10 81.4 8.2 92 584-713 92-192 (192)
80 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 3.2E-05 7E-10 80.0 9.7 109 579-722 85-197 (202)
81 TIGR01488 HAD-SF-IB Haloacid D 97.9 2.3E-05 4.9E-10 79.2 7.8 101 581-715 73-177 (177)
82 PRK09552 mtnX 2-hydroxy-3-keto 97.9 4.1E-05 8.9E-10 80.3 9.7 109 581-720 74-184 (219)
83 COG0546 Gph Predicted phosphat 97.9 0.00011 2.4E-09 77.0 11.7 127 579-749 87-217 (220)
84 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 5.4E-05 1.2E-09 77.3 9.1 114 580-720 71-186 (188)
85 PF05116 S6PP: Sucrose-6F-phos 97.9 9.6E-05 2.1E-09 78.7 11.2 157 593-751 31-244 (247)
86 PRK13222 phosphoglycolate phos 97.8 9.9E-05 2.1E-09 77.9 10.9 128 580-751 92-223 (226)
87 cd01427 HAD_like Haloacid deha 97.7 0.0001 2.2E-09 70.6 8.3 118 577-720 20-138 (139)
88 TIGR01454 AHBA_synth_RP 3-amin 97.7 0.00015 3.4E-09 75.1 10.3 125 581-749 75-203 (205)
89 TIGR01484 HAD-SF-IIB HAD-super 97.7 0.00032 6.9E-09 72.7 11.1 39 581-619 17-55 (204)
90 PRK14501 putative bifunctional 97.6 0.00078 1.7E-08 83.6 14.6 162 581-750 514-721 (726)
91 PRK13223 phosphoglycolate phos 97.5 0.00052 1.1E-08 74.4 10.1 125 580-748 100-228 (272)
92 PRK13288 pyrophosphatase PpaX; 97.4 0.00069 1.5E-08 70.8 10.3 125 581-749 82-210 (214)
93 TIGR01545 YfhB_g-proteo haloac 97.4 0.0014 3E-08 67.9 11.4 111 581-729 94-206 (210)
94 PRK11590 hypothetical protein; 97.3 0.0018 4E-08 67.3 11.9 112 581-730 95-208 (211)
95 TIGR01449 PGP_bact 2-phosphogl 97.3 0.00077 1.7E-08 70.3 8.9 116 581-738 85-204 (213)
96 PRK13225 phosphoglycolate phos 97.2 0.0034 7.3E-08 67.8 12.8 122 581-749 142-267 (273)
97 PRK10826 2-deoxyglucose-6-phos 97.2 0.0013 2.8E-08 69.2 8.8 113 581-738 92-210 (222)
98 PLN02770 haloacid dehalogenase 97.2 0.0022 4.7E-08 68.7 10.5 118 581-741 108-229 (248)
99 TIGR01544 HAD-SF-IE haloacid d 97.1 0.0078 1.7E-07 64.1 13.3 138 580-749 120-273 (277)
100 PRK13226 phosphoglycolate phos 97.1 0.0029 6.2E-08 66.8 10.0 123 581-747 95-222 (229)
101 smart00775 LNS2 LNS2 domain. T 97.0 0.0033 7.2E-08 61.7 9.6 104 579-718 25-141 (157)
102 PLN03243 haloacid dehalogenase 96.9 0.0034 7.4E-08 67.3 9.5 116 581-738 109-225 (260)
103 TIGR01672 AphA HAD superfamily 96.9 0.0018 4E-08 67.7 7.0 41 582-622 115-159 (237)
104 TIGR01422 phosphonatase phosph 96.9 0.0048 1E-07 66.3 10.5 96 581-717 99-195 (253)
105 PRK11009 aphA acid phosphatase 96.9 0.0024 5.3E-08 66.8 7.5 90 581-721 114-210 (237)
106 TIGR03351 PhnX-like phosphonat 96.8 0.0056 1.2E-07 64.2 9.4 98 580-719 86-186 (220)
107 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.0044 9.5E-08 63.8 7.9 93 580-715 105-197 (197)
108 COG3769 Predicted hydrolase (H 96.7 0.0075 1.6E-07 59.8 8.5 37 585-621 27-63 (274)
109 PRK11587 putative phosphatase; 96.7 0.011 2.4E-07 61.8 10.7 114 581-738 83-198 (218)
110 COG4030 Uncharacterized protei 96.7 0.0043 9.2E-08 61.5 6.7 156 581-750 83-262 (315)
111 PRK13478 phosphonoacetaldehyde 96.7 0.01 2.2E-07 64.3 10.6 41 581-621 101-141 (267)
112 PLN02575 haloacid dehalogenase 96.6 0.0097 2.1E-07 66.5 10.4 115 581-738 216-332 (381)
113 TIGR00685 T6PP trehalose-phosp 96.5 0.012 2.5E-07 62.8 9.8 67 678-749 161-239 (244)
114 TIGR02253 CTE7 HAD superfamily 96.4 0.011 2.5E-07 61.9 8.8 100 581-722 94-195 (221)
115 TIGR01685 MDP-1 magnesium-depe 96.4 0.018 3.9E-07 57.2 9.3 50 572-621 36-86 (174)
116 TIGR01662 HAD-SF-IIIA HAD-supe 96.3 0.018 3.8E-07 54.9 8.9 42 580-621 24-73 (132)
117 PRK06698 bifunctional 5'-methy 96.3 0.018 4E-07 67.5 10.5 123 581-750 330-454 (459)
118 PRK14988 GMP/IMP nucleotidase; 96.3 0.013 2.8E-07 61.5 8.1 41 581-621 93-133 (224)
119 TIGR01428 HAD_type_II 2-haloal 96.2 0.013 2.9E-07 60.2 7.8 95 581-719 92-188 (198)
120 PHA02530 pseT polynucleotide k 96.2 0.01 2.2E-07 65.5 7.5 108 578-719 184-292 (300)
121 TIGR01990 bPGM beta-phosphoglu 96.2 0.01 2.2E-07 60.2 6.9 94 581-718 87-180 (185)
122 PLN02580 trehalose-phosphatase 96.2 0.051 1.1E-06 60.7 12.6 63 683-750 300-374 (384)
123 COG4359 Uncharacterized conser 96.1 0.0084 1.8E-07 57.7 5.2 109 581-720 73-183 (220)
124 PRK08942 D,D-heptose 1,7-bisph 96.1 0.04 8.7E-07 55.7 10.6 27 581-607 29-55 (181)
125 PLN02423 phosphomannomutase 96.0 0.048 1E-06 58.1 11.0 39 683-722 188-231 (245)
126 PRK06769 hypothetical protein; 95.8 0.028 6E-07 56.4 7.8 28 581-608 28-55 (173)
127 PLN02940 riboflavin kinase 95.8 0.027 5.8E-07 64.1 8.4 96 581-718 93-189 (382)
128 TIGR01509 HAD-SF-IA-v3 haloaci 95.8 0.029 6.2E-07 56.7 7.8 95 581-718 85-179 (183)
129 TIGR01533 lipo_e_P4 5'-nucleot 95.7 0.05 1.1E-06 58.0 9.6 85 580-712 117-204 (266)
130 PLN02779 haloacid dehalogenase 95.7 0.044 9.5E-07 59.8 9.2 119 581-739 144-264 (286)
131 PLN02205 alpha,alpha-trehalose 95.7 0.08 1.7E-06 66.1 12.5 39 580-618 615-654 (854)
132 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.6 0.12 2.6E-06 55.5 12.2 49 574-622 10-65 (257)
133 TIGR02009 PGMB-YQAB-SF beta-ph 95.6 0.022 4.7E-07 57.8 6.2 39 581-621 88-126 (185)
134 TIGR00213 GmhB_yaeD D,D-heptos 95.6 0.058 1.2E-06 54.3 8.9 28 581-608 26-53 (176)
135 TIGR01675 plant-AP plant acid 95.6 0.064 1.4E-06 55.5 9.2 42 580-621 119-163 (229)
136 TIGR01668 YqeG_hyp_ppase HAD s 95.3 0.047 1E-06 54.5 7.1 40 581-620 43-83 (170)
137 PF13419 HAD_2: Haloacid dehal 95.2 0.034 7.5E-07 55.4 6.0 98 580-719 76-173 (176)
138 TIGR01656 Histidinol-ppas hist 95.1 0.049 1.1E-06 53.0 6.5 41 581-621 27-82 (147)
139 TIGR01261 hisB_Nterm histidino 95.0 0.061 1.3E-06 53.0 7.0 40 581-620 29-83 (161)
140 TIGR02254 YjjG/YfnB HAD superf 95.0 0.067 1.5E-06 56.1 7.8 41 581-622 97-137 (224)
141 PF06888 Put_Phosphatase: Puta 94.8 0.091 2E-06 54.8 7.7 106 581-713 71-187 (234)
142 PRK10444 UMP phosphatase; Prov 94.7 0.43 9.4E-06 50.8 13.0 48 574-621 10-60 (248)
143 smart00577 CPDc catalytic doma 94.7 0.029 6.2E-07 54.6 3.8 42 579-621 43-84 (148)
144 PRK09449 dUMP phosphatase; Pro 94.7 0.099 2.2E-06 54.9 8.1 40 581-621 95-134 (224)
145 PLN03017 trehalose-phosphatase 94.7 0.79 1.7E-05 51.0 15.1 62 683-749 282-355 (366)
146 PLN02811 hydrolase 94.5 0.13 2.7E-06 54.0 8.3 31 581-611 78-108 (220)
147 TIGR01681 HAD-SF-IIIC HAD-supe 94.5 0.083 1.8E-06 49.9 6.2 39 581-619 29-68 (128)
148 TIGR01549 HAD-SF-IA-v1 haloaci 94.4 0.1 2.2E-06 51.1 6.9 37 582-618 65-101 (154)
149 TIGR02252 DREG-2 REG-2-like, H 94.4 0.099 2.1E-06 53.9 7.1 40 581-621 105-144 (203)
150 COG2179 Predicted hydrolase of 94.2 0.14 3E-06 49.2 6.8 42 580-621 45-86 (175)
151 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.0 0.49 1.1E-05 50.3 11.5 48 574-621 17-66 (242)
152 PLN02919 haloacid dehalogenase 94.0 0.18 4E-06 65.0 9.6 137 581-758 161-300 (1057)
153 PRK05446 imidazole glycerol-ph 93.9 0.16 3.4E-06 56.6 7.8 27 580-606 29-55 (354)
154 TIGR01691 enolase-ppase 2,3-di 93.4 0.23 5.1E-06 51.6 7.5 97 580-720 94-193 (220)
155 TIGR01664 DNA-3'-Pase DNA 3'-p 93.3 0.28 6.1E-06 48.7 7.7 39 582-620 43-93 (166)
156 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.3 0.9 2E-05 48.5 12.1 50 574-623 10-62 (249)
157 PLN02645 phosphoglycolate phos 92.6 0.36 7.7E-06 53.5 8.0 48 574-621 37-87 (311)
158 KOG3120|consensus 92.5 0.81 1.8E-05 46.0 9.2 119 581-725 84-212 (256)
159 TIGR02247 HAD-1A3-hyp Epoxide 91.6 0.31 6.7E-06 50.6 5.9 30 580-609 93-122 (211)
160 KOG3040|consensus 91.4 0.8 1.7E-05 45.5 7.7 52 571-622 13-67 (262)
161 PLN02177 glycerol-3-phosphate 91.3 1.6 3.4E-05 51.2 11.7 97 582-722 111-214 (497)
162 PF09419 PGP_phosphatase: Mito 91.2 0.83 1.8E-05 44.9 7.8 86 579-716 57-157 (168)
163 TIGR01686 FkbH FkbH-like domai 91.1 0.44 9.5E-06 53.0 6.6 91 581-722 31-129 (320)
164 PF08235 LNS2: LNS2 (Lipin/Ned 90.9 1.4 3.1E-05 42.6 8.9 103 580-718 26-141 (157)
165 TIGR01689 EcbF-BcbF capsule bi 90.8 0.41 8.9E-06 44.7 5.1 88 580-670 23-120 (126)
166 PRK10725 fructose-1-P/6-phosph 88.9 0.94 2E-05 45.9 6.6 91 586-719 92-182 (188)
167 PLN02151 trehalose-phosphatase 88.9 4.4 9.6E-05 45.0 11.9 63 683-750 268-342 (354)
168 PRK09456 ?-D-glucose-1-phospha 88.5 0.78 1.7E-05 47.1 5.7 32 581-612 84-115 (199)
169 PRK10563 6-phosphogluconate ph 88.3 0.55 1.2E-05 49.1 4.5 97 581-721 88-184 (221)
170 TIGR01993 Pyr-5-nucltdase pyri 88.3 1.5 3.2E-05 44.3 7.5 98 581-719 84-181 (184)
171 TIGR01680 Veg_Stor_Prot vegeta 88.2 2.6 5.6E-05 44.7 9.2 30 580-609 144-173 (275)
172 COG0647 NagD Predicted sugar p 88.0 4.8 0.0001 43.0 11.1 45 574-618 17-61 (269)
173 PHA02597 30.2 hypothetical pro 87.8 1.8 3.9E-05 44.2 7.9 92 581-718 74-169 (197)
174 PF03767 Acid_phosphat_B: HAD 87.4 1.3 2.8E-05 46.5 6.5 89 581-711 115-207 (229)
175 PF13344 Hydrolase_6: Haloacid 86.6 0.48 1E-05 42.6 2.4 49 574-622 7-58 (101)
176 COG0241 HisB Histidinol phosph 86.5 2.1 4.6E-05 42.6 7.0 100 581-718 31-144 (181)
177 COG0637 Predicted phosphatase/ 86.3 1.7 3.7E-05 45.4 6.7 98 580-719 85-182 (221)
178 TIGR01452 PGP_euk phosphoglyco 86.2 6.7 0.00015 42.6 11.6 48 574-621 11-61 (279)
179 TIGR01684 viral_ppase viral ph 83.8 1.8 3.8E-05 46.4 5.4 41 582-622 146-187 (301)
180 TIGR01517 ATPase-IIB_Ca plasma 82.1 16 0.00034 47.2 14.1 84 115-199 128-221 (941)
181 COG3700 AphA Acid phosphatase 81.0 3.4 7.4E-05 40.0 5.5 90 582-721 115-210 (237)
182 PF02358 Trehalose_PPase: Treh 80.8 8.8 0.00019 40.5 9.5 64 675-739 156-233 (235)
183 TIGR01460 HAD-SF-IIA Haloacid 77.6 37 0.00081 35.8 13.0 49 574-622 7-59 (236)
184 PHA03398 viral phosphatase sup 77.3 4.1 8.8E-05 43.8 5.4 40 583-622 150-189 (303)
185 TIGR02251 HIF-SF_euk Dullard-l 75.2 2.4 5.2E-05 41.8 2.9 45 576-621 37-81 (162)
186 COG0474 MgtA Cation transport 75.1 99 0.0021 39.8 17.9 205 127-339 114-332 (917)
187 TIGR01657 P-ATPase-V P-type AT 75.0 91 0.002 40.9 17.9 226 127-378 198-451 (1054)
188 PRK10748 flavin mononucleotide 74.6 4.6 0.0001 42.7 5.1 28 581-609 113-140 (238)
189 TIGR01663 PNK-3'Pase polynucle 74.3 8.9 0.00019 45.3 7.7 39 582-620 198-248 (526)
190 PF06570 DUF1129: Protein of u 73.1 71 0.0015 32.9 13.3 23 974-1000 180-202 (206)
191 COG1877 OtsB Trehalose-6-phosp 69.5 24 0.00052 37.7 8.9 144 578-722 37-228 (266)
192 COG1011 Predicted hydrolase (H 68.1 11 0.00023 39.4 6.1 42 580-622 98-139 (229)
193 TIGR01493 HAD-SF-IA-v2 Haloaci 62.1 12 0.00026 37.2 4.9 34 581-621 90-123 (175)
194 COG2503 Predicted secreted aci 59.8 48 0.001 34.4 8.4 42 581-622 122-167 (274)
195 TIGR01652 ATPase-Plipid phosph 57.5 30 0.00065 45.3 8.5 102 78-184 18-127 (1057)
196 PF00389 2-Hacid_dh: D-isomer 55.6 1.8E+02 0.0039 27.2 11.8 46 676-722 42-89 (133)
197 PF13242 Hydrolase_like: HAD-h 55.4 18 0.00039 30.2 4.1 54 685-738 10-70 (75)
198 PF05822 UMPH-1: Pyrimidine 5' 54.3 66 0.0014 33.9 8.7 44 581-624 90-133 (246)
199 PRK15122 magnesium-transportin 54.1 3.2E+02 0.007 35.2 16.7 233 118-360 114-386 (903)
200 TIGR01522 ATPase-IIA2_Ca golgi 52.8 2.9E+02 0.0063 35.6 16.1 208 122-338 87-307 (884)
201 TIGR01106 ATPase-IIC_X-K sodiu 52.7 1.8E+02 0.004 37.9 14.4 201 125-335 113-324 (997)
202 TIGR01524 ATPase-IIIB_Mg magne 51.8 3.4E+02 0.0074 34.8 16.4 232 122-361 95-354 (867)
203 TIGR01647 ATPase-IIIA_H plasma 48.9 1.2E+02 0.0025 38.3 11.4 67 136-212 69-136 (755)
204 PRK01122 potassium-transportin 48.1 3.1E+02 0.0066 33.9 14.4 85 118-211 61-148 (679)
205 PTZ00445 p36-lilke protein; Pr 46.9 34 0.00075 34.9 5.1 76 522-610 28-104 (219)
206 PRK14194 bifunctional 5,10-met 46.6 75 0.0016 34.7 8.0 160 578-739 12-209 (301)
207 PRK11507 ribosome-associated p 46.2 25 0.00054 28.9 3.2 26 159-184 38-63 (70)
208 PRK14172 bifunctional 5,10-met 45.4 59 0.0013 35.0 6.9 158 579-738 11-207 (278)
209 PF12689 Acid_PPase: Acid Phos 45.0 36 0.00078 33.7 4.9 41 581-621 45-86 (169)
210 PRK14188 bifunctional 5,10-met 44.8 51 0.0011 35.9 6.5 158 579-738 11-207 (296)
211 PRK14170 bifunctional 5,10-met 44.5 61 0.0013 35.0 6.8 160 578-739 10-207 (284)
212 PRK14184 bifunctional 5,10-met 43.5 69 0.0015 34.6 7.1 158 579-739 10-211 (286)
213 PLN03063 alpha,alpha-trehalose 43.2 1.9E+02 0.0042 36.5 12.1 38 582-619 533-571 (797)
214 TIGR01456 CECR5 HAD-superfamil 42.8 93 0.002 34.5 8.4 48 574-621 9-64 (321)
215 PRK14174 bifunctional 5,10-met 42.6 61 0.0013 35.3 6.6 160 579-739 10-213 (295)
216 PF05297 Herpes_LMP1: Herpesvi 42.2 8.4 0.00018 40.2 0.0 131 820-1010 13-143 (381)
217 PF13275 S4_2: S4 domain; PDB: 42.0 15 0.00032 29.9 1.3 23 160-182 35-57 (65)
218 TIGR01459 HAD-SF-IIA-hyp4 HAD- 42.0 26 0.00056 37.1 3.7 28 583-611 140-167 (242)
219 PF00122 E1-E2_ATPase: E1-E2 A 40.8 1.5E+02 0.0033 30.8 9.3 66 273-338 150-217 (230)
220 PRK14169 bifunctional 5,10-met 40.6 82 0.0018 34.0 7.1 158 579-738 10-205 (282)
221 PF12368 DUF3650: Protein of u 39.6 24 0.00053 23.2 1.8 15 49-63 13-27 (28)
222 PRK05585 yajC preprotein trans 39.6 58 0.0013 29.4 4.9 14 172-185 51-64 (106)
223 TIGR01452 PGP_euk phosphoglyco 39.5 52 0.0011 35.7 5.7 43 679-721 202-246 (279)
224 CHL00200 trpA tryptophan synth 38.6 3.4E+02 0.0074 29.1 11.4 118 575-722 96-231 (263)
225 PF01455 HupF_HypC: HupF/HypC 38.0 63 0.0014 26.6 4.4 33 155-187 16-51 (68)
226 PRK14189 bifunctional 5,10-met 38.0 64 0.0014 34.9 5.8 159 579-739 12-208 (285)
227 PF03120 DNA_ligase_OB: NAD-de 37.7 17 0.00036 31.1 1.1 22 169-190 45-67 (82)
228 PLN03190 aminophospholipid tra 36.7 83 0.0018 41.5 7.6 30 971-1000 1114-1143(1178)
229 PRK14182 bifunctional 5,10-met 36.5 1E+02 0.0023 33.2 7.1 160 579-739 10-207 (282)
230 PRK14179 bifunctional 5,10-met 36.0 85 0.0018 34.0 6.4 158 579-738 11-207 (284)
231 KOG0206|consensus 36.0 80 0.0017 40.9 7.1 30 971-1000 1049-1078(1151)
232 PRK14190 bifunctional 5,10-met 35.7 92 0.002 33.7 6.6 158 578-738 11-207 (284)
233 PF13380 CoA_binding_2: CoA bi 35.5 34 0.00074 31.5 2.9 41 581-621 63-104 (116)
234 PRK14166 bifunctional 5,10-met 35.2 85 0.0018 33.9 6.2 159 579-739 10-207 (282)
235 KOG2882|consensus 34.8 60 0.0013 34.9 4.9 48 574-621 31-81 (306)
236 TIGR02250 FCP1_euk FCP1-like p 34.2 60 0.0013 31.7 4.6 44 578-622 55-98 (156)
237 TIGR01494 ATPase_P-type ATPase 34.0 3.7E+02 0.008 31.9 12.2 148 162-338 53-213 (499)
238 KOG3085|consensus 33.3 1.7E+02 0.0036 30.8 7.8 108 581-732 113-222 (237)
239 PRK14191 bifunctional 5,10-met 33.3 1.1E+02 0.0024 33.2 6.6 159 579-739 10-207 (285)
240 PF15584 Imm44: Immunity prote 33.0 19 0.00041 31.0 0.7 19 176-194 13-31 (94)
241 TIGR00216 ispH_lytB (E)-4-hydr 31.5 2.5E+02 0.0055 30.3 9.0 52 676-727 214-267 (280)
242 PF03348 Serinc: Serine incorp 31.3 62 0.0013 37.4 4.7 26 935-960 106-131 (429)
243 PRK14186 bifunctional 5,10-met 31.2 1E+02 0.0022 33.6 6.0 159 578-738 10-207 (297)
244 PF02699 YajC: Preprotein tran 30.8 57 0.0012 27.9 3.3 14 172-185 35-48 (82)
245 PF12710 HAD: haloacid dehalog 30.7 23 0.0005 35.6 1.1 13 362-374 1-13 (192)
246 COG1188 Ribosome-associated he 30.3 55 0.0012 29.0 3.1 30 158-188 34-63 (100)
247 PF06645 SPC12: Microsomal sig 30.0 2.4E+02 0.0052 23.8 6.8 18 274-291 6-23 (76)
248 PRK14167 bifunctional 5,10-met 29.8 1.4E+02 0.003 32.6 6.7 157 579-738 11-210 (297)
249 TIGR02468 sucrsPsyn_pln sucros 29.3 4.1E+02 0.0089 34.5 11.6 40 683-722 955-1001(1050)
250 PRK13670 hypothetical protein; 29.1 3E+02 0.0066 31.4 9.7 97 571-714 2-112 (388)
251 cd00860 ThrRS_anticodon ThrRS 29.0 1.2E+02 0.0025 26.0 5.2 47 575-621 6-53 (91)
252 cd05017 SIS_PGI_PMI_1 The memb 28.7 92 0.002 28.6 4.7 40 579-620 52-91 (119)
253 PRK14176 bifunctional 5,10-met 28.6 1E+02 0.0022 33.4 5.5 159 578-738 16-213 (287)
254 KOG2592|consensus 28.3 1.5E+02 0.0032 33.2 6.5 25 936-960 109-133 (426)
255 PRK14177 bifunctional 5,10-met 28.2 1.6E+02 0.0034 31.9 6.8 159 578-738 11-208 (284)
256 COG0761 lytB 4-Hydroxy-3-methy 28.1 5E+02 0.011 28.0 10.2 53 676-728 218-272 (294)
257 PRK14178 bifunctional 5,10-met 27.7 1.4E+02 0.0029 32.3 6.2 78 660-739 116-202 (279)
258 TIGR01116 ATPase-IIA1_Ca sarco 27.6 8E+02 0.017 31.7 14.3 78 127-214 41-119 (917)
259 PLN02591 tryptophan synthase 27.2 7.1E+02 0.015 26.5 11.4 41 682-722 174-218 (250)
260 PRK14180 bifunctional 5,10-met 26.8 1.8E+02 0.004 31.4 7.0 158 579-738 10-207 (282)
261 TIGR00739 yajC preprotein tran 26.6 87 0.0019 27.0 3.7 14 172-185 36-49 (84)
262 PF13748 ABC_membrane_3: ABC t 26.6 2.7E+02 0.006 29.0 7.8 46 120-165 139-184 (237)
263 TIGR02244 HAD-IG-Ncltidse HAD 26.3 1E+02 0.0022 34.4 5.1 38 582-619 185-223 (343)
264 PRK14193 bifunctional 5,10-met 26.1 1.4E+02 0.003 32.4 5.9 159 578-738 11-209 (284)
265 PRK04980 hypothetical protein; 25.8 76 0.0016 28.4 3.2 55 157-216 20-81 (102)
266 PLN02897 tetrahydrofolate dehy 25.8 2.1E+02 0.0046 31.8 7.4 162 577-738 63-263 (345)
267 PRK05886 yajC preprotein trans 25.6 1.1E+02 0.0025 27.7 4.3 9 141-149 26-34 (109)
268 PF06738 DUF1212: Protein of u 25.0 4.3E+02 0.0092 26.6 9.2 39 39-84 72-110 (193)
269 PRK14183 bifunctional 5,10-met 24.1 1.8E+02 0.0038 31.5 6.2 159 579-739 10-207 (281)
270 PLN02616 tetrahydrofolate dehy 23.8 3E+02 0.0065 30.9 8.0 162 577-738 80-280 (364)
271 PRK14187 bifunctional 5,10-met 23.6 2.3E+02 0.005 30.8 7.0 160 579-738 11-209 (294)
272 PRK10517 magnesium-transportin 22.8 1.7E+03 0.037 28.7 16.2 21 163-183 185-205 (902)
273 smart00306 HintN Hint (Hedgeho 22.7 82 0.0018 27.6 3.0 26 158-183 74-99 (100)
274 COG0279 GmhA Phosphoheptose is 22.5 86 0.0019 30.6 3.1 43 571-615 112-154 (176)
275 PF06506 PrpR_N: Propionate ca 22.3 1.8E+02 0.0039 28.9 5.7 68 676-761 105-172 (176)
276 PF14336 DUF4392: Domain of un 22.1 3.3E+02 0.0071 29.7 8.0 41 581-621 60-101 (291)
277 PF06941 NT5C: 5' nucleotidase 21.8 65 0.0014 32.6 2.5 29 581-609 73-101 (191)
278 PF03129 HGTP_anticodon: Antic 21.5 1.4E+02 0.003 25.9 4.3 48 574-621 3-54 (94)
279 PRK10792 bifunctional 5,10-met 21.3 2.1E+02 0.0046 31.0 6.2 160 578-739 11-209 (285)
280 KOG0209|consensus 21.2 8.1E+02 0.018 30.6 11.2 49 567-620 492-554 (1160)
281 PRK13111 trpA tryptophan synth 21.1 9.9E+02 0.022 25.5 11.3 41 682-722 185-228 (258)
282 COG0078 ArgF Ornithine carbamo 20.9 9.4E+02 0.02 26.3 10.7 36 582-621 88-123 (310)
283 COG1862 YajC Preprotein transl 20.8 1.5E+02 0.0032 26.4 4.0 14 172-185 42-55 (97)
284 PF09926 DUF2158: Uncharacteri 20.8 62 0.0013 25.1 1.5 12 175-186 2-13 (53)
285 PRK01045 ispH 4-hydroxy-3-meth 20.6 4.3E+02 0.0094 28.9 8.4 62 665-726 204-268 (298)
286 PF11019 DUF2608: Protein of u 20.2 5.6E+02 0.012 27.3 9.2 43 581-623 81-126 (252)
287 PRK13125 trpA tryptophan synth 20.2 7.2E+02 0.016 26.2 10.1 39 684-722 171-214 (244)
288 TIGR00739 yajC preprotein tran 20.1 4.3E+02 0.0093 22.7 6.7 23 142-164 26-49 (84)
No 1
>KOG0203|consensus
Probab=100.00 E-value=2.4e-172 Score=1427.37 Aligned_cols=999 Identities=66% Similarity=1.078 Sum_probs=962.9
Q ss_pred CCCCCCCcchhccccccccccccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHH
Q psy3624 11 KPEHHKSSSKLDNLKKEIELDDHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFS 90 (1010)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~ 90 (1010)
..++++++++++..+++..++.|.+|.+|+.+++++|..+|||.+++.+++.+.|+|.++++++.+.|..|.+|+++.|.
T Consensus 18 ~~~~~~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ 97 (1019)
T KOG0203|consen 18 KRKKKKKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFS 97 (1019)
T ss_pred hccccchhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHH
Confidence 44556677789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEe
Q psy3624 91 VLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTIL 170 (1010)
Q Consensus 91 ~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~ 170 (1010)
+++|++++++++.|.+.....+....++++.+++++.+++++..+.++|+.|..+.++++++++|+.++|+|||....+.
T Consensus 98 ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~ 177 (1019)
T KOG0203|consen 98 ILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTIN 177 (1019)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEec
Confidence 99999999999999987766566666889999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCcEEEecCCCeecccEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEc
Q psy3624 171 SSELVRGDVVDVKFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILC 250 (1010)
Q Consensus 171 ~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~t 250 (1010)
++||||||+|.++-||+||||.+++++.+++||+|+|||||.|..+++.....++++..|+.|.+|.+++|.++|+|++|
T Consensus 178 ~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~t 257 (1019)
T KOG0203|consen 178 AEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIAT 257 (1019)
T ss_pred hhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred CCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHH
Q psy3624 251 GDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVT 330 (1010)
Q Consensus 251 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~ 330 (1010)
|.+|.+|+|+.+....+..++|+++++++|..++..+++++++++|++....++.|..++.+.++++++.+|+||+..++
T Consensus 258 Gd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvT 337 (1019)
T KOG0203|consen 258 GDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVT 337 (1019)
T ss_pred CCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceeh
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHH
Q psy3624 331 VCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKD 410 (1010)
Q Consensus 331 ~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (1010)
.++....+||+++++++|++.++|+||+.++||+|||||||+|+|+|.++|.++.....+...+..+..+. ...+....
T Consensus 338 v~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~-~~~~~~~~ 416 (1019)
T KOG0203|consen 338 VCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFD-KSSATFIA 416 (1019)
T ss_pred hhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhccccc-ccCchHHH
Confidence 99999999999999999999999999999999999999999999999999999988777765554443333 33567788
Q ss_pred HHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCC---
Q psy3624 411 LTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPN--- 487 (1010)
Q Consensus 411 l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~--- 487 (1010)
+..++.+||.+.+...+.+.|..+....||+.|.|++++++...++...+|++++.+.++||+|.+|++.+++...+
T Consensus 417 l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~ 496 (1019)
T KOG0203|consen 417 LSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSD 496 (1019)
T ss_pred HHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCC
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999998754
Q ss_pred CeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCC
Q psy3624 488 NEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPL 567 (1010)
Q Consensus 488 ~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e 567 (1010)
.++.+.+|||||.++++|+.+..+|+..|++++.++.+.+.+.++...|.||++||++.++++++++...+..+..++.-
T Consensus 497 ~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~ 576 (1019)
T KOG0203|consen 497 PRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPT 576 (1019)
T ss_pred ccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999888888888899
Q ss_pred CCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCc
Q psy3624 568 TGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRES 647 (1010)
Q Consensus 568 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (1010)
.++.|+|++++-||+|..+++|+.+||+|||+++|+|||++.||+++|++.||..++.+..++.+++.+.+....++++.
T Consensus 577 ~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a 656 (1019)
T KOG0203|consen 577 DNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDA 656 (1019)
T ss_pred hhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcccc
Confidence 99999999999999999999999999999999999999999999999999999998888888889999999999999999
Q ss_pred ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCH
Q psy3624 648 TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSD 727 (1010)
Q Consensus 648 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~ 727 (1010)
.+.++.|.++.++..+++++++.++.++||||.||+||..||+.+|++|.+|+++|||+||+||||+||||||||+.|+|
T Consensus 657 ~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSD 736 (1019)
T KOG0203|consen 657 KAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 736 (1019)
T ss_pred ceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHH
Q psy3624 728 VSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAI 807 (1010)
Q Consensus 728 ~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~ 807 (1010)
++|++||+|++||||.+|+..+++||.+|+|+||.+.|.+++|+.++.++++++++|+|+|++++++|++++.+|+.||+
T Consensus 737 vsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAi 816 (1019)
T KOG0203|consen 737 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAI 816 (1019)
T ss_pred HHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccc
Q psy3624 808 SLAYEKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLED 887 (1010)
Q Consensus 808 ~l~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 887 (1010)
+||||+||.|+|+|+||+|+.++|++++++.+.|+|+|.++++++|++||+.++..||.|..+.++...|.+...+|+++
T Consensus 817 SLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~D 896 (1019)
T KOG0203|consen 817 SLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTD 896 (1019)
T ss_pred hHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccccCccChhHHHHHHHHHHHHHHHhccccccccccc
Q psy3624 888 SYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGMNNWVLNFGIVFETVAACIVSYCPGMDEILKT 967 (1010)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip~l~~~f~~ 967 (1010)
+||++|+|+++...+++|+|.+|+++|.+|+++.++|++|+.|+|.++++||.+++++++.++++++++|+|++...+++
T Consensus 897 syGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~ 976 (1019)
T KOG0203|consen 897 SYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGM 976 (1019)
T ss_pred hccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHhhCCCCcccccccC
Q psy3624 968 YPVRAEWWLPAVPFAIVIFIYDECRRFWLRTHPNGWVERETYY 1010 (1010)
Q Consensus 968 ~~l~~~~wl~~l~~~~~~l~~~e~~K~~~r~~~~~~~~~~~~~ 1010 (1010)
.|+.|+||+..++++++++++||++|+++|+||++|.+|+|||
T Consensus 977 ~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~gw~e~etyY 1019 (1019)
T KOG0203|consen 977 YPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPGGWLEKETYY 1019 (1019)
T ss_pred CCCCcEEEEecccceeeeeeHHHHHhHhhhhCCCchhhhhccC
Confidence 9999999999999999999999999999999999999999999
No 2
>KOG0202|consensus
Probab=100.00 E-value=6e-157 Score=1308.37 Aligned_cols=920 Identities=36% Similarity=0.547 Sum_probs=782.6
Q ss_pred ccccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q psy3624 30 LDDHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFH 109 (1010)
Q Consensus 30 ~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~ 109 (1010)
.+.|..+++|+++.|++|+++|||.+|+.+|+++||.|+++..+..+.|+.+++||-+++.++|++++++|+++..
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~---- 77 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD---- 77 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh----
Confidence 3567799999999999999999999999999999999999999999999999999999999999999999998743
Q ss_pred cccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeec
Q psy3624 110 ISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIP 189 (1010)
Q Consensus 110 ~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iP 189 (1010)
+-.++++.+++++++.+++|||||++|++++|+++.|+.++|+|+|+.+.++++||||||||.|+-||+||
T Consensus 78 ---------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVP 148 (972)
T KOG0202|consen 78 ---------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIP 148 (972)
T ss_pred ---------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccc
Confidence 22567777788889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEeCceEEEeecccCCCccccccCCCcc----cccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccC
Q psy3624 190 ADIRIIESHGFKVDNSSLTGEAEPQARNASEST----TIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSG 265 (1010)
Q Consensus 190 aD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~----~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 265 (1010)
||.++++..++.||||.|||||.|+.|...... ...-+.+|++|+||.|..|.++|+|+.||.+|.+|++.+..+.
T Consensus 149 ADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~ 228 (972)
T KOG0202|consen 149 ADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQA 228 (972)
T ss_pred cceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhc
Confidence 999999999999999999999999999765422 2345789999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH--HHHhh-----h---hhHHHHHHHHHHhheeeccCcchHHHHHHHHH
Q psy3624 266 LESGDTPIAKEIHHFMHLISAWAIFLGVTFFF--LSFAL-----G---YAWIDAVIFLIGIIVANVPEGLLATVTVCLSL 335 (1010)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~---~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~ 335 (1010)
.++.+||||++++.+...+..+..++++.+.+ ++.+. + ..+.+.+..++++.++++|+|||+.++++++.
T Consensus 229 ~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLAL 308 (972)
T KOG0202|consen 229 TESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLAL 308 (972)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHH
Confidence 89999999999999999988444444433333 33333 3 34567788899999999999999999999999
Q ss_pred HHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeec-ccC------CCCCc--------hh
Q psy3624 336 TAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVD-YFK------DPTGL--------IE 400 (1010)
Q Consensus 336 ~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~~------~~~~~--------~~ 400 (1010)
|.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+...... .+. ++.+. ..
T Consensus 309 G~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~ 388 (972)
T KOG0202|consen 309 GTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKD 388 (972)
T ss_pred hHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccc
Confidence 9999999999999999999999999999999999999999999999865433211 000 00010 01
Q ss_pred hhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHH---------------Hhhhcc
Q psy3624 401 KVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVE---------------FRNRHK 465 (1010)
Q Consensus 401 ~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~---------------~~~~~~ 465 (1010)
.....+.+..+..++++||++....+.. ...+..|+|+|.||..++++.+..... +...++
T Consensus 389 ~~~~~~~l~~l~~i~~lCNda~v~~~~~----~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~ 464 (972)
T KOG0202|consen 389 KAGDNDLLQELAEICALCNDATVEYNDA----DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFK 464 (972)
T ss_pred cccccHHHHHHHHHHHhhhhhhhhcCch----hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhh
Confidence 1123456788899999999987654432 224568999999999999876542211 334456
Q ss_pred eeEeecCCCCCceEEEEEEeCCC--eEEEEEeCChHHHHHhccccccCC--ccccCCHHhHHHHHHHHHHHHhccCcEEE
Q psy3624 466 KALEIPFNSTDKYQVSIHIMPNN--EYLLVMKGAPERILDRCSTMKQGD--KDVELDAKNRHEVEEILEQLGNYGERVLG 541 (1010)
Q Consensus 466 ~~~~~~f~s~~k~~~~v~~~~~~--~~~~~~KGa~e~il~~c~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~G~rvl~ 541 (1010)
.+.++||+|+||+|++.+....+ ++.+|+|||+|.|+++|+++..++ ...++++..|+.+.+...+|+++|+||||
T Consensus 465 ~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLa 544 (972)
T KOG0202|consen 465 KIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLA 544 (972)
T ss_pred heeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEE
Confidence 67999999999999998886544 489999999999999998877644 56899999999999999999999999999
Q ss_pred EeeeccCCCCCCCCCc-CCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Q psy3624 542 FCDYALPPAKFPAGFE-LKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGI 620 (1010)
Q Consensus 542 ~a~~~l~~~~~~~~~~-~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi 620 (1010)
+|++..+.. .+...+ .+.......|.||+|+|++|+.||||++++++|+.|+++||||+|+|||+..||++||+++|+
T Consensus 545 lA~~~~~~~-~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 545 LASKDSPGQ-VPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred EEccCCccc-ChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 999876641 111111 122234456899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEE
Q psy3624 621 ISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVA 700 (1010)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~ 700 (1010)
...+. +....+++|.+++.+++++.++...+.. +|+|++|.+|.+||+.||+.|++|+
T Consensus 624 ~~~~e--------------------d~~~~~~TG~efD~ls~~~~~~~~~~~~--vFaR~~P~HK~kIVeaLq~~geivA 681 (972)
T KOG0202|consen 624 FSEDE--------------------DVSSMALTGSEFDDLSDEELDDAVRRVL--VFARAEPQHKLKIVEALQSRGEVVA 681 (972)
T ss_pred CcCCc--------------------cccccccchhhhhcCCHHHHHHHhhcce--EEEecCchhHHHHHHHHHhcCCEEE
Confidence 76432 2344589999999999999999988877 9999999999999999999999999
Q ss_pred EEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHH
Q psy3624 701 VTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMF 780 (1010)
Q Consensus 701 ~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~ 780 (1010)
|+|||+||+|+||.||||||||++|+|++|+|||+|+.||||++|+.++++||.+|.||++|+.|++++|++++..+++.
T Consensus 682 MTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~ 761 (972)
T KOG0202|consen 682 MTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLT 761 (972)
T ss_pred ecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCchhHHHHHHHHHHhhchHHHHHhcccCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3624 781 IVIGIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIM 860 (1010)
Q Consensus 781 ~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 860 (1010)
..+++|.||+|+|+||+|+++|.+||.+|+++||++|+|+||||+++ +.+++..+++.+ +..|++..++++.+|.+-+
T Consensus 762 aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~-~~iit~~l~~r~-l~~g~~vg~~Tv~~f~~~~ 839 (972)
T KOG0202|consen 762 AAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSK-DGIITGWLIFRY-LAIGIIVGVATVGVFVWWM 839 (972)
T ss_pred HHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCC-CCeeeHHHHHHH-HHhheeeeeeEhHhhhHHH
Confidence 99999999999999999999999999999999999999999999865 789998887764 4577777777777776655
Q ss_pred HhcCCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccccCc-cCh
Q psy3624 861 AQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGM-NNW 939 (1010)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~-~n~ 939 (1010)
.+. .+...+.-..+|... +.+.++....+... ....|+.|..+|+...||.++|++...++|..++ .|+
T Consensus 840 ~~~--~~~vt~~~~~~~~~c----~~~~~~~~c~~F~~----~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~ 909 (972)
T KOG0202|consen 840 YGA--DGKVTYRQLAHYNSC----CRDFYGSRCAVFED----MCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNR 909 (972)
T ss_pred hcC--CCCcChhhhcchhhh----cccccccchhhhcc----cccceEEEeehhHHHHHHHhhcccCCcceEEecccccH
Confidence 422 221111111223211 11112222211111 1345888999999999999999999999999885 999
Q ss_pred hHHHHHHHHHHHHHHHhccccccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q psy3624 940 VLNFGIVFETVAACIVSYCPGMDEILKTYPVRAEWWLPAVPFAIVIFIYDECRRFWLRTHPN 1001 (1010)
Q Consensus 940 ~~~~~i~~~~~~~~~~~~ip~l~~~f~~~~l~~~~wl~~l~~~~~~l~~~e~~K~~~r~~~~ 1001 (1010)
|+.+++.+++++++.++|+|+++.+|+++||++..|++++.+++.+++++|++|++.|++..
T Consensus 910 ~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~~ 971 (972)
T KOG0202|consen 910 WLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYFK 971 (972)
T ss_pred HHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999998853
No 3
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.2e-151 Score=1414.13 Aligned_cols=988 Identities=65% Similarity=1.063 Sum_probs=854.8
Q ss_pred ccccccccccccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy3624 22 DNLKKEIELDDHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCF 101 (1010)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~ 101 (1010)
+..++...++||..++++++++|++|+.+|||++||++|+++||+|+++++++.++|..|+++++++|.+++|+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~ 86 (997)
T TIGR01106 7 DELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCF 86 (997)
T ss_pred hhhhhhccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 45677788899999999999999999889999999999999999999998888999999999999999999999999988
Q ss_pred HHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEE
Q psy3624 102 IAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVD 181 (1010)
Q Consensus 102 ~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~ 181 (1010)
+.+.+..........+.++.+++++++++++++++++||+|+++.+++++++.+++++|+|||++++|+++||||||+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~ 166 (997)
T TIGR01106 87 LAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVE 166 (997)
T ss_pred HHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEE
Confidence 77665321111112245677888888999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCeecccEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhh
Q psy3624 182 VKFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAG 261 (1010)
Q Consensus 182 l~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 261 (1010)
|++||+|||||++++|+++.||||+|||||.|+.|.+++....+++.+|++|+||.+.+|.+.++|++||.+|.+|++.+
T Consensus 167 l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~ 246 (997)
T TIGR01106 167 VKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIAS 246 (997)
T ss_pred ECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHh
Confidence 99999999999999998889999999999999999987655567788999999999999999999999999999999999
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhh
Q psy3624 262 LTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMA 341 (1010)
Q Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~ 341 (1010)
+++..+.+++|+++.++++...++.++++++++++++++..+..|.+.+.+++++++++|||+||++++++++.++++|+
T Consensus 247 ~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~ 326 (997)
T TIGR01106 247 LASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 326 (997)
T ss_pred hhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHH
Confidence 88888888999999999999999888888888777777777788999999999999999999999999999999999999
Q ss_pred cccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCc
Q psy3624 342 SKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRA 421 (1010)
Q Consensus 342 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~ 421 (1010)
++|+++|+++++|+||++|+||||||||||+|+|+|.++++++..+..+...+..+.... ......+.++.++++||++
T Consensus 327 ~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~alcn~~ 405 (997)
T TIGR01106 327 RKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFD-KSSATWLALSRIAGLCNRA 405 (997)
T ss_pred HCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCC-cccHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999998877765432221111111 1123345678899999988
Q ss_pred cccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeC---CCeEEEEEeCCh
Q psy3624 422 EFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMP---NNEYLLVMKGAP 498 (1010)
Q Consensus 422 ~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~---~~~~~~~~KGa~ 498 (1010)
.+..+...++...+...|||+|.|+++++...+.+....+..++++.++||+|+||+|++++... ++.+++|+||||
T Consensus 406 ~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGAp 485 (997)
T TIGR01106 406 VFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAP 485 (997)
T ss_pred eeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCCh
Confidence 76554444555556778999999999999887777777888899999999999999998887642 356889999999
Q ss_pred HHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEee
Q psy3624 499 ERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSM 578 (1010)
Q Consensus 499 e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~ 578 (1010)
|.|+++|+++..+|+..+++++.++.+++.+++++++|+||+++|||.++.++++.....+.++.+..|+||+|+|++++
T Consensus 486 e~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i 565 (997)
T TIGR01106 486 ERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISM 565 (997)
T ss_pred HHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEec
Confidence 99999999988888889999999999999999999999999999999987655443222222223345899999999999
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhh
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILR 658 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 658 (1010)
+||+|++++++|++|+++||+++|+|||++.+|.++|+++|+..++.+...++.+..+......+..+....+++|.+++
T Consensus 566 ~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645 (997)
T ss_pred cCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh
Confidence 99999999999999999999999999999999999999999986554333333322222221122222334799999999
Q ss_pred cCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEec
Q psy3624 659 DMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILL 738 (1010)
Q Consensus 659 ~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~ 738 (1010)
.+.++++++.+.+++.+||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|+|.+|++||+++.
T Consensus 646 ~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~ 725 (997)
T TIGR01106 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILL 725 (997)
T ss_pred hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEe
Confidence 99999999999888778999999999999999999999999999999999999999999999997899999999999999
Q ss_pred CCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccCCCccc
Q psy3624 739 DDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDI 818 (1010)
Q Consensus 739 ~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~ 818 (1010)
+|+|.+|++++++||++|.|+++++.|.++.|+.++++++++.+++.|+|++++|+||+|+++|.+|+++|++|||++++
T Consensus 726 dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~ 805 (997)
T TIGR01106 726 DDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDI 805 (997)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhc
Q psy3624 819 MRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASR 898 (1010)
Q Consensus 819 m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (1010)
|+|||++++.++++++.++...++..|++++++++++|++.++++||.+...+++...|.....++....++..|....+
T Consensus 806 m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (997)
T TIGR01106 806 MKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQR 885 (997)
T ss_pred ccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcc
Confidence 99999987778999988877666667999999999999888877787776666653334322122222233333433322
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhhccCccccccCccChhHHHHHHHHHHHHHHHhccccccccccccccCchhHHHH
Q psy3624 899 KILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGMNNWVLNFGIVFETVAACIVSYCPGMDEILKTYPVRAEWWLPA 978 (1010)
Q Consensus 899 ~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip~l~~~f~~~~l~~~~wl~~ 978 (1010)
......++|++|.+++++|++|.++||+++.++|+.+++|++++.+++++++++++++|+|+++.+|++.|+++.+|+++
T Consensus 886 ~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~ 965 (997)
T TIGR01106 886 KYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCA 965 (997)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHH
Confidence 22223578999999999999999999998888887778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCcccccccC
Q psy3624 979 VPFAIVIFIYDECRRFWLRTHPNGWVERETYY 1010 (1010)
Q Consensus 979 l~~~~~~l~~~e~~K~~~r~~~~~~~~~~~~~ 1010 (1010)
++++++.++++|++|+++|+++++|++|.+||
T Consensus 966 ~~~~~~~~~~~~~~k~~~r~~~~~~~~~~~~~ 997 (997)
T TIGR01106 966 FPYSLLIFVYDEIRKLIIRRNPGGWVEKETYY 997 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcchhhHhhcC
Confidence 99999999999999999999999999999998
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.8e-141 Score=1316.08 Aligned_cols=915 Identities=31% Similarity=0.437 Sum_probs=762.4
Q ss_pred cccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcc
Q psy3624 31 DDHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHI 110 (1010)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~ 110 (1010)
+||.++++++++.|++|+.+|||++||++|+++||+|+++++++.++|..++++|++++.++++++++++++.
T Consensus 6 ~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~------- 78 (1053)
T TIGR01523 6 AYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM------- 78 (1053)
T ss_pred chhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH-------
Confidence 6899999999999999988899999999999999999999988899999999999999999999999988865
Q ss_pred ccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecc
Q psy3624 111 SEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPA 190 (1010)
Q Consensus 111 ~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPa 190 (1010)
+.|..+++++++++++++++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||
T Consensus 79 ------~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPA 152 (1053)
T TIGR01523 79 ------HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPA 152 (1053)
T ss_pred ------hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeec
Confidence 34567888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCceEEEeecccCCCccccccCCCc-----ccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccC
Q psy3624 191 DIRIIESHGFKVDNSSLTGEAEPQARNASES-----TTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSG 265 (1010)
Q Consensus 191 D~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~-----~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 265 (1010)
||+|++++++.||||+|||||.|+.|.+... .....++.|++|+||.|.+|+++|+|++||.+|++|+|.+++..
T Consensus 153 D~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~ 232 (1053)
T TIGR01523 153 DLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQG 232 (1053)
T ss_pred cEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhh
Confidence 9999999999999999999999999987532 12234678999999999999999999999999999999987754
Q ss_pred CCC-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy3624 266 LES-----------------------------------GDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAV 310 (1010)
Q Consensus 266 ~~~-----------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1010)
.+. .+||+|++++++..+++.++++++++++++... ..+...+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~~~~~~~ 310 (1053)
T TIGR01523 233 DGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--DVDKEVA 310 (1053)
T ss_pred hhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhHHHH
Confidence 221 249999999999999888888777776654432 1235677
Q ss_pred HHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCC-eeeee
Q psy3624 311 IFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDK-EVFEV 389 (1010)
Q Consensus 311 ~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~-~~~~~ 389 (1010)
.++++++++++|++||++++++++.+++||+++|++||+++++|+||++++||+|||||||+|+|+|++++.++ ..+..
T Consensus 311 ~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~ 390 (1053)
T TIGR01523 311 IYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISI 390 (1053)
T ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEe
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998864 22322
Q ss_pred cccCC---CC-Cc---------------------h--------h--h-hc--CchhHHHHHHHhhhcCCccccCChhhhh
Q psy3624 390 DYFKD---PT-GL---------------------I--------E--K-VR--NMSSYKDLTLAGSLCNRAEFTPNQEKIQ 431 (1010)
Q Consensus 390 ~~~~~---~~-~~---------------------~--------~--~-~~--~~~~~~~l~~~~~lc~~~~~~~~~~~~~ 431 (1010)
+.... +. +. . . . .. .......++.++++||++.+..++..
T Consensus 391 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~-- 468 (1053)
T TIGR01523 391 DNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDAT-- 468 (1053)
T ss_pred cCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCC--
Confidence 21000 00 00 0 0 0 00 01234568888999998775432111
Q ss_pred hhcccccCChhHHHHHHHHHHhcCCh------HHH-------------------hhhcceeEeecCCCCCceEEEEEEeC
Q psy3624 432 ILKREVMGDASEAAILKFSELAIGDV------VEF-------------------RNRHKKALEIPFNSTDKYQVSIHIMP 486 (1010)
Q Consensus 432 ~~~~~~~g~~~e~all~~~~~~~~~~------~~~-------------------~~~~~~~~~~~f~s~~k~~~~v~~~~ 486 (1010)
..+...|||+|.|+++++...+.+. ... +..++++.++||||+||+|+++++.+
T Consensus 469 -~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~ 547 (1053)
T TIGR01523 469 -DCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDN 547 (1053)
T ss_pred -CceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeC
Confidence 1124579999999999988765421 111 22467889999999999999998865
Q ss_pred CC-eEEEEEeCChHHHHHhccccccC-C-ccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCC-CcCCCCC
Q psy3624 487 NN-EYLLVMKGAPERILDRCSTMKQG-D-KDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAG-FELKSDP 562 (1010)
Q Consensus 487 ~~-~~~~~~KGa~e~il~~c~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~-~~~~~~~ 562 (1010)
++ .+++|+|||||.|+++|+.+..+ | ...+++++.++++.+..++++++|+||+|+|||.++.+++..+ .+.....
T Consensus 548 ~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~ 627 (1053)
T TIGR01523 548 HGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLN 627 (1053)
T ss_pred CCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccc
Confidence 43 58899999999999999976543 2 4678999999999999999999999999999999876432211 0000111
Q ss_pred CCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccC
Q psy3624 563 PNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSL 642 (1010)
Q Consensus 563 ~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~ 642 (1010)
.+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..++....
T Consensus 628 ~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~-------------- 693 (1053)
T TIGR01523 628 RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHD-------------- 693 (1053)
T ss_pred hhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccccc--------------
Confidence 234689999999999999999999999999999999999999999999999999999975421100
Q ss_pred CCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeC
Q psy3624 643 DPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMG 722 (1010)
Q Consensus 643 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg 722 (1010)
........+++|.+++.+.++++.+...+.. ||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||
T Consensus 694 ~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~--V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 694 RDEIMDSMVMTGSQFDALSDEEVDDLKALCL--VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred ccccccceeeehHHhhhcCHHHHHHHhhcCe--EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecC
Confidence 0011134699999999999999988887765 99999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHh----cc-CchhHHHHHHHH
Q psy3624 723 ITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVI----GI-PLPLGVVAILCI 797 (1010)
Q Consensus 723 ~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~----~~-~~pl~~~~il~~ 797 (1010)
.+|+|.++++||+++.+++|.+|.+++++||++|+|+++++.|.+++|+.++++++++.++ |. |+||+|+|+||+
T Consensus 772 ~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~i 851 (1053)
T TIGR01523 772 INGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWC 851 (1053)
T ss_pred CCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999988888887 44 589999999999
Q ss_pred HHhhchHHHHHhcccCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccc
Q psy3624 798 DLGTDMWPAISLAYEKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARW 877 (1010)
Q Consensus 798 ~l~~~~l~~~~l~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (1010)
|+++|.+|+++|++|||++++|+|||+++ .+++++++++..++ ..|+++++.++++|++.++. +.+.... +
T Consensus 852 nli~d~~palaL~~e~~~~~~m~~~Pr~~-~~~l~~~~~~~~~~-~~g~~~~~~~l~~~~~~~~~--~~~~~~~-----~ 922 (1053)
T TIGR01523 852 IMITSCFPAMGLGLEKAAPDLMDRLPHDN-EVGIFQKELIIDMF-AYGFFLGGSCLASFTGILYG--FGSGNLG-----H 922 (1053)
T ss_pred HHHHHHHHHHhhccCCCChhHHhcCCCCC-CccccCHHHHHHHH-HHHHHHHHHHHHHHHHHHHh--ccCcccc-----c
Confidence 99999999999999999999999999874 47899988765433 46788888888888765432 1110000 0
Q ss_pred cccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCcccccc----------------CccChhH
Q psy3624 878 ESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQ----------------GMNNWVL 941 (1010)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~----------------~~~n~~~ 941 (1010)
++...++..+. ...+++|++|.+++++|+++.+++|+++.++|+. .++|+++
T Consensus 923 ------~~~~~~~~~~~------~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l 990 (1053)
T TIGR01523 923 ------DCDAHYHAGCN------DVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFL 990 (1053)
T ss_pred ------ccccccccccc------chhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHH
Confidence 00000111110 0135789999999999999999999998887765 2589999
Q ss_pred HHHHHHHHHHHHHHhccccccc-cccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q psy3624 942 NFGIVFETVAACIVSYCPGMDE-ILKTYPVRAEWWLPAVPFAIVIFIYDECRRFWLRTHPN 1001 (1010)
Q Consensus 942 ~~~i~~~~~~~~~~~~ip~l~~-~f~~~~l~~~~wl~~l~~~~~~l~~~e~~K~~~r~~~~ 1001 (1010)
+++++++++++++++|+|+++. +|++.|+++ .|+++++++++.++++|++|+++|++++
T Consensus 991 ~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~~~ 1050 (1053)
T TIGR01523 991 AWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRLFK 1050 (1053)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999986 999999997 7888999999999999999999887764
No 5
>KOG0204|consensus
Probab=100.00 E-value=6.2e-142 Score=1185.36 Aligned_cols=880 Identities=28% Similarity=0.422 Sum_probs=743.1
Q ss_pred CCHHHHHHHhCCCccCCCCH--HHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcccc
Q psy3624 35 LPLKDLCARYQTSAEKGLTS--AQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISE 112 (1010)
Q Consensus 35 ~~~~~~~~~l~~~~~~GLs~--~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~ 112 (1010)
-.+++++++|+||+..||+. +|.++|++.||.|.+|+++++++|.+..+.+-+.-.++|.+++++|+.. .+.....+
T Consensus 101 gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~l-gi~~~g~~ 179 (1034)
T KOG0204|consen 101 GGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGL-GIYTPGIE 179 (1034)
T ss_pred cCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhh-hhccCCCC
Confidence 46889999999999999988 7899999999999999999999999888887666667777777777654 34443344
Q ss_pred ccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccE
Q psy3624 113 DASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADI 192 (1010)
Q Consensus 113 ~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~ 192 (1010)
..|++.....+.++++++++++-+|.|+.+.++..+.-+ ..+..|+|||+.++|+..|||||||+.|+.||.+||||
T Consensus 180 ~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~---~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADG 256 (1034)
T KOG0204|consen 180 DGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKR---NIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADG 256 (1034)
T ss_pred cccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhh---ceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccce
Confidence 566666655566667778888889999988877663322 46789999999999999999999999999999999999
Q ss_pred EEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCc
Q psy3624 193 RIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTP 272 (1010)
Q Consensus 193 ~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 272 (1010)
++++|+++.+|||++||||++++|.+... .++++||++.+|+++++|+++|.+|..|+++..+.....++||
T Consensus 257 vli~gn~L~iDESSlTGESd~v~k~~~~d--------PfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tp 328 (1034)
T KOG0204|consen 257 VLIQGNSLKIDESSLTGESDHVQKSLDKD--------PFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETP 328 (1034)
T ss_pred EEEeccceeEecccccCCCcceeccCCCC--------CeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCc
Confidence 99999999999999999999999987532 4799999999999999999999999999999999888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhh-----------------hhHHHHHHHHHHhheeeccCcchHHHHHH
Q psy3624 273 IAKEIHHFMHLISAWAIFLGVTFFFLSF---ALG-----------------YAWIDAVIFLIGIIVANVPEGLLATVTVC 332 (1010)
Q Consensus 273 l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~~~~~~~~i~~l~~~iP~~L~~~~~~~ 332 (1010)
+|-++++++..+..+.++++++.+++.. ..+ ..+.+.+..+++++++++|+|||++++++
T Consensus 329 LQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLs 408 (1034)
T KOG0204|consen 329 LQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLS 408 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHH
Confidence 9999999999888877766665554432 211 12445667788899999999999999999
Q ss_pred HHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHH
Q psy3624 333 LSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLT 412 (1010)
Q Consensus 333 ~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 412 (1010)
+++++++|.+.+.+||++++||++|+.++||+|||||||+|+|+|++.|++++.+..+..+. .. -...-.+.+.
T Consensus 409 LAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~-~~-----l~~~~~~ll~ 482 (1034)
T KOG0204|consen 409 LAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKS-SN-----LPPSLLDLLL 482 (1034)
T ss_pred HHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCccc-cc-----CCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888776433221 00 1112233445
Q ss_pred HHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEE
Q psy3624 413 LAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLL 492 (1010)
Q Consensus 413 ~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~ 492 (1010)
...+...+......+.. ....++.|+|+|.|++.+....+.+....|..+...+.+||+|.||+|.++++.+++..++
T Consensus 483 ~gI~~Nt~g~v~~~~~~--g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~ 560 (1034)
T KOG0204|consen 483 QGIAQNTTGSVVKPEKG--GEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYV 560 (1034)
T ss_pred HHHhhcCCCeEEecCCC--CcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEE
Confidence 55555544443332211 1234788999999999999999999999999999999999999999999999987776239
Q ss_pred EEeCChHHHHHhcccccc-CCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcE
Q psy3624 493 VMKGAPERILDRCSTMKQ-GDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLR 571 (1010)
Q Consensus 493 ~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~ 571 (1010)
++|||+|.|+++|+++.+ +|+..+++++.+..+++.++.||++|+|++|+|||...+.. ..+.+.++.+..+.+++
T Consensus 561 ~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~---~~~~~~~~~~~~~~~lt 637 (1034)
T KOG0204|consen 561 HWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGP---DEEPSWDNEELPEGGLT 637 (1034)
T ss_pred EEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCC---CCCCCccccccCCCCeE
Confidence 999999999999999998 78889999999999999999999999999999999865541 11112233345789999
Q ss_pred EEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeE
Q psy3624 572 FLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIV 651 (1010)
Q Consensus 572 ~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (1010)
++|++|++||+||+++++|+.|++|||.|.|+||||..||++||.+|||.+++.. ..+
T Consensus 638 ~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d----------------------~~~ 695 (1034)
T KOG0204|consen 638 LLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD----------------------FLA 695 (1034)
T ss_pred EEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc----------------------cce
Confidence 9999999999999999999999999999999999999999999999999886532 358
Q ss_pred EechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHh
Q psy3624 652 IQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQ 731 (1010)
Q Consensus 652 ~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~ 731 (1010)
++|.+++++.+++.++++++.+ |+||++|.+|.-+|+.++++|++|+++|||.||+|||++||||+|||+.|+|+|||
T Consensus 696 lEG~eFr~~s~ee~~~i~pkl~--VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKE 773 (1034)
T KOG0204|consen 696 LEGKEFRELSQEERDKIWPKLR--VLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKE 773 (1034)
T ss_pred ecchhhhhcCHHHHHhhhhhhe--eeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhh
Confidence 9999999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcc
Q psy3624 732 TADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAY 811 (1010)
Q Consensus 732 aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~ 811 (1010)
+||+|++||||.+|+++++|||++|.||+|+++|+++.|+++++..+...+.....||+++|+||+|++||.|.++|||+
T Consensus 774 aSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALAT 853 (1034)
T KOG0204|consen 774 ASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALAT 853 (1034)
T ss_pred hCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999998888887777789999999999999999999999999
Q ss_pred cCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccc
Q psy3624 812 EKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQ 891 (1010)
Q Consensus 812 ~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (1010)
|||.+++|+|+|.. +.++|+++.||..+++| .+|+.++.+. +. |.+..+|+.... .+ +
T Consensus 854 epPt~~Lm~RkP~G-R~~~LIt~tMwknil~q-a~YQl~vl~i----L~----F~G~~if~~~~~---~~------~--- 911 (1034)
T KOG0204|consen 854 EPPTDELMKRKPVG-RTKPLITRTMWKNILGQ-AVYQLIVLFI----LN----FAGKSIFGLNGP---LH------S--- 911 (1034)
T ss_pred CCCChHHhcCCCCC-CCCcchHHHHHHHHHHH-HHHHHHHHHH----HH----hcchhhhccCCC---CC------C---
Confidence 99999999999975 56899999999887664 3555544433 32 333444442111 00 0
Q ss_pred cchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccC-ccccccCccChhHHHHHHHHHHHHHHHhcccccccccccccc
Q psy3624 892 EWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRY-NSLVHQGMNNWVLNFGIVFETVAACIVSYCPGMDEILKTYPV 970 (1010)
Q Consensus 892 ~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip~l~~~f~~~~l 970 (1010)
...+..|++|++||+||+||.++.|.-. ..+|+.-++|+.|+..+...+++|++++. +++.+|+++|+
T Consensus 912 ---------~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIve--F~g~~~st~~L 980 (1034)
T KOG0204|consen 912 ---------PPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVE--FGGAFFSTTPL 980 (1034)
T ss_pred ---------chhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhh--hcCcceeeecc
Confidence 0124569999999999999999988743 34565556999988877788888877654 47789999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHH
Q psy3624 971 RAEWWLPAVPFAIVIFIYDECRRF 994 (1010)
Q Consensus 971 ~~~~wl~~l~~~~~~l~~~e~~K~ 994 (1010)
++.+|++|+.++++.+++..+.|.
T Consensus 981 ~~~qWl~ci~~g~~sl~~g~~ik~ 1004 (1034)
T KOG0204|consen 981 SLTQWLWCIFIGVLSLPWGQLLKC 1004 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhee
Confidence 999999999999999999888874
No 6
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.1e-134 Score=1249.52 Aligned_cols=865 Identities=31% Similarity=0.506 Sum_probs=753.3
Q ss_pred ccccCCCHHHHHHHhCCCccCCCC-HHHHHHHhhccCCCCCCCCCCCCHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHh
Q psy3624 30 LDDHKLPLKDLCARYQTSAEKGLT-SAQAKQFLLRDGPNSLTPAKKTPAWVILLKHL-FEGFSVLLWTGAVLCFIAYLIE 107 (1010)
Q Consensus 30 ~~~~~~~~~~~~~~l~~~~~~GLs-~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l-~~~f~~~l~~~~~~~~~~~~i~ 107 (1010)
.+||.+++++++++|++|+.+||| ++|+++|+++||+|+++.+++.++|..+++++ .+++.++++++++++++.
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---- 77 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---- 77 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH----
Confidence 478999999999999999889999 89999999999999999888899999999999 899999999998888764
Q ss_pred hccccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCe
Q psy3624 108 FHISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDR 187 (1010)
Q Consensus 108 ~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~ 187 (1010)
+.+..+++++++++++..++++||+|+++.+++++++.+.+++|+|||++++|+++||||||+|.|++||+
T Consensus 78 ---------g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~ 148 (884)
T TIGR01522 78 ---------GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDR 148 (884)
T ss_pred ---------cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCE
Confidence 23455666667777788999999999999999999999999999999999999999999999999999999
Q ss_pred ecccEEEEEeCceEEEeecccCCCccccccCCCcc----cccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcc
Q psy3624 188 IPADIRIIESHGFKVDNSSLTGEAEPQARNASEST----TIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLT 263 (1010)
Q Consensus 188 iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~----~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 263 (1010)
|||||++++|+++.||||+|||||.|+.|.+++.. ....+.+|++|+||.+.+|+++++|++||.+|.+|++.+++
T Consensus 149 IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v 228 (884)
T TIGR01522 149 VPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMM 228 (884)
T ss_pred EeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHh
Confidence 99999999998789999999999999999987532 22346779999999999999999999999999999999999
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcc
Q psy3624 264 SGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASK 343 (1010)
Q Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~ 343 (1010)
+..+..++|+++.++++..++..++++++++++++.+..+.+|.+++..++++++++|||+||++++++++.++++|+++
T Consensus 229 ~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~ 308 (884)
T TIGR01522 229 QAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKK 308 (884)
T ss_pred ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhc
Confidence 88888899999999999998877665555555555555566788999999999999999999999999999999999999
Q ss_pred cceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeee-ecccC-CCCCch------hhhcCchhHHHHHHHh
Q psy3624 344 NCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFE-VDYFK-DPTGLI------EKVRNMSSYKDLTLAG 415 (1010)
Q Consensus 344 ~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~-~~~~~-~~~~~~------~~~~~~~~~~~l~~~~ 415 (1010)
|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+. .+... ++.+.. ......+....++.++
T Consensus 309 ~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 388 (884)
T TIGR01522 309 RAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAG 388 (884)
T ss_pred CCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999987654321 11000 000000 0001122345677888
Q ss_pred hhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEe-CCCeEEEEE
Q psy3624 416 SLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIM-PNNEYLLVM 494 (1010)
Q Consensus 416 ~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~-~~~~~~~~~ 494 (1010)
++||++.....+ ....|||+|.|+++++...+. ...+..++.+.++||+|.+|+|+++++. .++++++++
T Consensus 389 ~l~~~~~~~~~~-------~~~~g~p~e~All~~~~~~~~--~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~ 459 (884)
T TIGR01522 389 NLCNNAKFRNEA-------DTLLGNPTDVALIELLMKFGL--DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFM 459 (884)
T ss_pred hhhCCCeecCCC-------CCcCCChHHHHHHHHHHHcCc--HhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEE
Confidence 999988654321 134589999999999886543 2344567888999999999999988765 356789999
Q ss_pred eCChHHHHHhcccccc-CCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEE
Q psy3624 495 KGAPERILDRCSTMKQ-GDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFL 573 (1010)
Q Consensus 495 KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~l 573 (1010)
||+||.|+++|+++.. +|...+++++.++++.+..++++++|+|++++|++.+ +.+|+|+
T Consensus 460 KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-------------------~~~l~~l 520 (884)
T TIGR01522 460 KGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-------------------KGQLTFL 520 (884)
T ss_pred eCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-------------------CCCeEEE
Confidence 9999999999998765 4667788888899999999999999999999999854 2478999
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEe
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQ 653 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (1010)
|+++++||+||+++++|++|+++|++++|+|||+..+|.++|+++||..... .+++
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~------------------------~~v~ 576 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTS------------------------QSVS 576 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC------------------------ceeE
Confidence 9999999999999999999999999999999999999999999999975321 2679
Q ss_pred chhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhc
Q psy3624 654 GSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTA 733 (1010)
Q Consensus 654 g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aA 733 (1010)
|.+++.+..+++.+.+.+.. +|||++|+||.++|+.+|+.|++|+|+|||.||+||+++||||||||.+|++.++++|
T Consensus 577 g~~l~~~~~~~l~~~~~~~~--Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aa 654 (884)
T TIGR01522 577 GEKLDAMDDQQLSQIVPKVA--VFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAA 654 (884)
T ss_pred hHHhHhCCHHHHHHHhhcCe--EEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhc
Confidence 99999999999999988776 9999999999999999999999999999999999999999999999977999999999
Q ss_pred CEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccC
Q psy3624 734 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEK 813 (1010)
Q Consensus 734 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~ 813 (1010)
|+++.+|++..+.+++++||++|+|+++++.|.++.|+..++.++++.+++.|.|++++|+||+|+++|.+|+++|++||
T Consensus 655 Divl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~ 734 (884)
T TIGR01522 655 DMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEP 734 (884)
T ss_pred CEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCC
Confidence 99999999999999999999999999999999999999999888888899999999999999999999999999999999
Q ss_pred CCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccc
Q psy3624 814 AESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEW 893 (1010)
Q Consensus 814 ~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 893 (1010)
|++++|++||+++ .++++++.++..+. ..|+++.++.++.|++.+.. + .
T Consensus 735 ~~~~~m~~~P~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~---------~---~----------------- 783 (884)
T TIGR01522 735 VDKDVMRKPPRPR-NDKILTKDLIKKIL-VSAIIIVVGTLFVFVREMQD---------G---V----------------- 783 (884)
T ss_pred CChhHhhCCCCCC-CCCccCHHHHHHHH-HHHHHHHHHHHHHHHHHHcC---------C---c-----------------
Confidence 9999999999864 57999998877644 45666666655555432210 0 0
Q ss_pred hhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccccC-ccChhHHHHHHHHHHHHHHHhccccccccccccccCc
Q psy3624 894 TYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQG-MNNWVLNFGIVFETVAACIVSYCPGMDEILKTYPVRA 972 (1010)
Q Consensus 894 ~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~i~~~~~~~~~~~~ip~l~~~f~~~~l~~ 972 (1010)
....++|++|.+++++|++|.+++|+++.++|+.+ ++|+++++++++.++++++++|+|+++.+|++.|+++
T Consensus 784 -------~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~ 856 (884)
T TIGR01522 784 -------ITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSI 856 (884)
T ss_pred -------chhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 01246899999999999999999999888888755 5999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhC
Q psy3624 973 EWWLPAVPFAIVIFIYDECRRFWLRTH 999 (1010)
Q Consensus 973 ~~wl~~l~~~~~~l~~~e~~K~~~r~~ 999 (1010)
.+|+++++++++.++++|++|+++|++
T Consensus 857 ~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 857 KDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999988765
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-135 Score=1248.07 Aligned_cols=882 Identities=35% Similarity=0.528 Sum_probs=769.7
Q ss_pred ccccccccCCCHH--HHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3624 26 KEIELDDHKLPLK--DLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIA 103 (1010)
Q Consensus 26 ~~~~~~~~~~~~~--~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~ 103 (1010)
......||..+.+ ++...+.++...||+++|+.+|+++||+|+++..++.++|..++.+|+++|..+++++++++++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~ 96 (917)
T COG0474 17 PVTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFV 96 (917)
T ss_pred cCCcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445578888888 99999999989999999999999999999999989999999999999999999999998888765
Q ss_pred HHHhhccccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEec
Q psy3624 104 YLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVK 183 (1010)
Q Consensus 104 ~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~ 183 (1010)
..+. +.....++++.+++++++++++||+|+++++++++++.+.+++|+|||++++|+++||||||||.++
T Consensus 97 ~~~~---------~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~ 167 (917)
T COG0474 97 GDWV---------DAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLE 167 (917)
T ss_pred hccc---------ccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEEC
Confidence 3210 0003345677788889999999999999999999999999999999999999999999999999999
Q ss_pred CCCeecccEEEEEeCceEEEeecccCCCccccccCCCcc--ccc--ccccceeeeeeeeeeeeEeEEEEEcCCcCchhhh
Q psy3624 184 FGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASEST--TIV--LEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRI 259 (1010)
Q Consensus 184 ~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~--~~~--~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i 259 (1010)
+||+||||++|++++++.||||+|||||.|+.|.+.... +.+ +++.|++|+||.+.+|++.|+|++||.+|+.|++
T Consensus 168 ~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~i 247 (917)
T COG0474 168 AGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKI 247 (917)
T ss_pred CCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHH
Confidence 999999999999999989999999999999999976542 111 3788999999999999999999999999999999
Q ss_pred hhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHhheeeccCcchHHHHHHHHHHHH
Q psy3624 260 AGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYA-WIDAVIFLIGIIVANVPEGLLATVTVCLSLTAK 338 (1010)
Q Consensus 260 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~ 338 (1010)
+..+.......+|+++.++++...+..++++++++.++..+..+.. |.++++++++++++++|++||+.++++++.++.
T Consensus 248 a~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 248 ARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 9998887678999999999999999999999998888888766455 899999999999999999999999999999999
Q ss_pred HhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhc
Q psy3624 339 RMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLC 418 (1010)
Q Consensus 339 ~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc 418 (1010)
+|+++++++|+++++|+||++|+||+|||||||+|+|+|++++..+...+.+ + ......+....++..+++|
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~---~-----~~~~~~~~~~~~l~~~~lc 399 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID---D-----KDLKDSPALLRFLLAAALC 399 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc---c-----cccccchHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999884100000 0 0111233345678899999
Q ss_pred CCccccCChhhhhhhcccccCChhHHHHHHHHHHhcC--ChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeC
Q psy3624 419 NRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIG--DVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKG 496 (1010)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~--~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KG 496 (1010)
|++....+ . ++..|||+|.|+++++.+.+. +....+..++++.++||||+||||+++++..++++++++||
T Consensus 400 ~~~~~~~~-~------~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KG 472 (917)
T COG0474 400 NSVTPEKN-G------WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKG 472 (917)
T ss_pred Cccccccc-C------ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcC
Confidence 98875433 2 567899999999999998887 77778888899999999999999999999777779999999
Q ss_pred ChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEE
Q psy3624 497 APERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLM 576 (1010)
Q Consensus 497 a~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i 576 (1010)
|||.|+++|++. +...+++++.++.+++..++|+++|+||+++|||.++..+... +. +..|+||+|+|++
T Consensus 473 Ape~il~~~~~~---~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~------~~-~~~E~dl~~lGl~ 542 (917)
T COG0474 473 APEVILERCKSI---GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD------EV-DEIESDLVFLGLT 542 (917)
T ss_pred ChHHHHHHhccc---CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc------hh-hhhhccceeehhh
Confidence 999999999987 7778899999999999999999999999999999776543211 11 3478999999999
Q ss_pred eecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechh
Q psy3624 577 SMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSI 656 (1010)
Q Consensus 577 ~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 656 (1010)
+++||+|++++++|+.|+++||+++|+|||+..||++||++||+..+.. ...+++|.+
T Consensus 543 g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~----------------------~~~vi~G~e 600 (917)
T COG0474 543 GIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE----------------------SALVIDGAE 600 (917)
T ss_pred hccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC----------------------ceeEeehHH
Confidence 9999999999999999999999999999999999999999999865321 046999999
Q ss_pred hhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEE
Q psy3624 657 LRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMI 736 (1010)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~v 736 (1010)
++.+.++++.+.+.+++ ||||++|+||.++|+.+|+.|++|+|+|||.||+||||+||||||||.+|+|++|++||++
T Consensus 601 l~~l~~~el~~~~~~~~--VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadiv 678 (917)
T COG0474 601 LDALSDEELAELVEELS--VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIV 678 (917)
T ss_pred hhhcCHHHHHHHhhhCc--EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceE
Confidence 99999999999999998 9999999999999999999999999999999999999999999999988999999999999
Q ss_pred ecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccC-chhHHHHHHHHHHhhchHHHHHhcccCCC
Q psy3624 737 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIP-LPLGVVAILCIDLGTDMWPAISLAYEKAE 815 (1010)
Q Consensus 737 l~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~-~pl~~~~il~~~l~~~~l~~~~l~~~~~~ 815 (1010)
+.++++..+..+++|||++|.|+++++.|.+++|+.+++.++++.+++.+ .|++++|++|+|+++|.+|+++|+.++|+
T Consensus 679 l~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~ 758 (917)
T COG0474 679 LLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPE 758 (917)
T ss_pred eecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCc
Confidence 99999999999999999999999999999999999999999999888888 99999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchh
Q psy3624 816 SDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTY 895 (1010)
Q Consensus 816 ~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (1010)
.+.|++||++|. .++++++.+...+.+.|+..+++.+++|.+.+...+.... +.
T Consensus 759 ~~~m~~~~~~p~-~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~---------------------- 812 (917)
T COG0474 759 SDVMKRPPRGPE-EGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTL---GL---------------------- 812 (917)
T ss_pred ccccccCCCCcc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---ch----------------------
Confidence 999999998765 6788888777656667777777777777766532211000 00
Q ss_pred hhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccccCc-cChhHHHHHHHHHHHHHHHhcccccc-ccccccccCch
Q psy3624 896 ASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGM-NNWVLNFGIVFETVAACIVSYCPGMD-EILKTYPVRAE 973 (1010)
Q Consensus 896 ~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~-~n~~~~~~i~~~~~~~~~~~~ip~l~-~~f~~~~l~~~ 973 (1010)
.......+|++|..++++|+++.+.+|+.+.+++...+ .|+.+++++++.++++++..|+|.+. ..|+..|++..
T Consensus 813 ---~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~ 889 (917)
T COG0474 813 ---DLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLF 889 (917)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHH
Confidence 00123578999999999999999999998878776653 89999999999999999999999988 78999999988
Q ss_pred hHHHHHHHHHHHH--HHHHHHHH
Q psy3624 974 WWLPAVPFAIVIF--IYDECRRF 994 (1010)
Q Consensus 974 ~wl~~l~~~~~~l--~~~e~~K~ 994 (1010)
.|+.++.+....+ ...+..|.
T Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 890 EWLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 8988877774443 34444443
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.3e-132 Score=1224.72 Aligned_cols=859 Identities=25% Similarity=0.369 Sum_probs=727.0
Q ss_pred cccccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhh
Q psy3624 29 ELDDHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEF 108 (1010)
Q Consensus 29 ~~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~ 108 (1010)
-.+.|..+++++++.|+++ .+|||++|+++|+++||+|+++.+++.++|..|+++|+++|.++++++++++++...+..
T Consensus 24 ~~~~~~~~~~~v~~~l~~~-~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~ 102 (903)
T PRK15122 24 IAREAANSLEETLANLNTH-RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLP 102 (903)
T ss_pred HHHHHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 4467889999999999999 589999999999999999999988888999999999999999999999999887643321
Q ss_pred ccccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCC------eEEEEeCCCccCCcEEEe
Q psy3624 109 HISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDG------QKKTILSSELVRGDVVDV 182 (1010)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g------~~~~i~~~~Lv~GDiV~l 182 (1010)
.. .+....+..+++++++++++++++++||+|++++.++|+++.+++++|+||| ++++|+++||||||+|.|
T Consensus 103 ~~--~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l 180 (903)
T PRK15122 103 LR--RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHL 180 (903)
T ss_pred cc--CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEE
Confidence 10 0111245678888889999999999999999999999999999999999994 899999999999999999
Q ss_pred cCCCeecccEEEEEeCceEEEeecccCCCccccccCCC-------------cccccccccceeeeeeeeeeeeEeEEEEE
Q psy3624 183 KFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASE-------------STTIVLEAKNLAFFSTNAVEGTAKGIVIL 249 (1010)
Q Consensus 183 ~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~-------------~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~ 249 (1010)
++||+|||||++++|+++.||||+|||||.|+.|.+.. ......+.+|++|+||.+.+|+++++|++
T Consensus 181 ~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~a 260 (903)
T PRK15122 181 SAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVA 260 (903)
T ss_pred CCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEE
Confidence 99999999999999998899999999999999998621 11233467899999999999999999999
Q ss_pred cCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHH
Q psy3624 250 CGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATV 329 (1010)
Q Consensus 250 tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~ 329 (1010)
||.+|++|++.+++.. ...++|+++.++++...+..+++.++.+.+++....+.+|.+++.+++++++++|||+||+++
T Consensus 261 tG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~v 339 (903)
T PRK15122 261 TGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIV 339 (903)
T ss_pred eccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHH
Confidence 9999999999998877 556789999999999888777766666555555545567889999999999999999999999
Q ss_pred HHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHH
Q psy3624 330 TVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYK 409 (1010)
Q Consensus 330 ~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (1010)
+++++.++.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. . . .+
T Consensus 340 t~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~------~------------~--~~ 399 (903)
T PRK15122 340 SSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG------R------------K--DE 399 (903)
T ss_pred HHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC------C------------C--hH
Confidence 99999999999999999999999999999999999999999999999998753211 0 0 01
Q ss_pred HHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCe
Q psy3624 410 DLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNE 489 (1010)
Q Consensus 410 ~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~ 489 (1010)
.++..+++|+... ...|||+|.|+++++...+.+ ..+..++...++||++.+|+|+++++..+++
T Consensus 400 ~~l~~a~l~s~~~-------------~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~ 464 (903)
T PRK15122 400 RVLQLAWLNSFHQ-------------SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQ 464 (903)
T ss_pred HHHHHHHHhCCCC-------------CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEEcCCCc
Confidence 2344444432110 125799999999998765432 2344577889999999999999988776778
Q ss_pred EEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCC
Q psy3624 490 YLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTG 569 (1010)
Q Consensus 490 ~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~ 569 (1010)
+++++|||||.++++|++...++...+++++.++++.+..++++++|+|++++|||.++.++... ...+..|+|
T Consensus 465 ~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~------~~~~~~e~~ 538 (903)
T PRK15122 465 HLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA------QYSTADERD 538 (903)
T ss_pred EEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc------ccccccccC
Confidence 89999999999999999887777788899999999999999999999999999999876532111 011124679
Q ss_pred cEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcce
Q psy3624 570 LRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTT 649 (1010)
Q Consensus 570 l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (1010)
++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||...
T Consensus 539 l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~-------------------------- 592 (903)
T PRK15122 539 LVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG-------------------------- 592 (903)
T ss_pred cEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--------------------------
Confidence 999999999999999999999999999999999999999999999999999532
Q ss_pred eEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHH
Q psy3624 650 IVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVS 729 (1010)
Q Consensus 650 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~a 729 (1010)
.+++|.+++.++++++.+.+++.. +|||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|.|
T Consensus 593 ~vi~G~el~~~~~~el~~~v~~~~--VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvA 669 (903)
T PRK15122 593 EPLLGTEIEAMDDAALAREVEERT--VFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIA 669 (903)
T ss_pred CccchHhhhhCCHHHHHHHhhhCC--EEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHH
Confidence 278999999999999999998888 99999999999999999999999999999999999999999999999 999999
Q ss_pred HhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHh
Q psy3624 730 KQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISL 809 (1010)
Q Consensus 730 k~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l 809 (1010)
|++||+|+.+|||+.|++++++||++|+|++|++.|.++.|+..++.+++..+++.++|++|+|+||+|+++|. |+++|
T Consensus 670 keaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal 748 (903)
T PRK15122 670 KESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSL 748 (903)
T ss_pred HHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhh
Confidence 99999999999999999999999999999999999999999999888777777766689999999999999995 99999
Q ss_pred cccCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccc
Q psy3624 810 AYEKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSY 889 (1010)
Q Consensus 810 ~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1010)
++|||++++| |||++++ .+++++.++. +|.+.+++.+.+|++.++.... +.. .
T Consensus 749 ~~d~~~~~~m-~~P~~~~-~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~------~~~--------------~ 801 (903)
T PRK15122 749 PWDKMDKEFL-RKPRKWD-AKNIGRFMLW-----IGPTSSIFDITTFALMWFVFAA------NSV--------------E 801 (903)
T ss_pred cCCCCCHhhc-CCCCCCC-hhhhHHHHHH-----HHHHHHHHHHHHHHHHHHHhcc------CcH--------------h
Confidence 9999999999 9999865 5677764432 4555555555555543221110 000 0
Q ss_pred cccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccccCccChhHHHHHHHHHHHHHHHhcccc--ccccccc
Q psy3624 890 GQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGMNNWVLNFGIVFETVAACIVSYCPG--MDEILKT 967 (1010)
Q Consensus 890 ~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip~--l~~~f~~ 967 (1010)
. ....+|.+|.+++++|+++.+++|+++.++| +|++.+..++++++++++++|+|+ ++.+|++
T Consensus 802 -------~----~~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~ 866 (903)
T PRK15122 802 -------M----QALFQSGWFIEGLLSQTLVVHMLRTQKIPFI----QSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGL 866 (903)
T ss_pred -------h----hhhhHHHHHHHHHHHHHHHHHhhCcCCCCcC----cchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC
Confidence 0 0024688899999999999999999876544 466677777888889999999996 8999999
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHhhCCCCcc
Q psy3624 968 YPVRAEWWLPAVPFAIVIFIYDECRRFWLRTHPNGWV 1004 (1010)
Q Consensus 968 ~~l~~~~wl~~l~~~~~~l~~~e~~K~~~r~~~~~~~ 1004 (1010)
.|+++.+|+++++++++++++.|+.|.+.+|..+.|+
T Consensus 867 ~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~~~~~ 903 (903)
T PRK15122 867 EPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRFGQWF 903 (903)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Confidence 9999999999999999988888888854444434564
No 9
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2.2e-132 Score=1220.24 Aligned_cols=841 Identities=25% Similarity=0.380 Sum_probs=720.3
Q ss_pred cccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcc
Q psy3624 31 DDHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHI 110 (1010)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~ 110 (1010)
+.+..+.+++++.|++++ +|||++||++|+++||+|+++.+++.++|..++++|++||.++++++++++++.
T Consensus 48 ~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~------- 119 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------- 119 (902)
T ss_pred HHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH-------
Confidence 456789999999999995 799999999999999999999988889999999999999999999988887754
Q ss_pred ccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeC------CeEEEEeCCCccCCcEEEecC
Q psy3624 111 SEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRD------GQKKTILSSELVRGDVVDVKF 184 (1010)
Q Consensus 111 ~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~------g~~~~i~~~~Lv~GDiV~l~~ 184 (1010)
+.+..+++++++++++.+++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++
T Consensus 120 ------~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~ 193 (902)
T PRK10517 120 ------EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAA 193 (902)
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECC
Confidence 34567788888999999999999999999999999999999999999 789999999999999999999
Q ss_pred CCeecccEEEEEeCceEEEeecccCCCccccccCCCc---ccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhh
Q psy3624 185 GDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASES---TTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAG 261 (1010)
Q Consensus 185 G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~---~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 261 (1010)
||+|||||+|++|+++.||||+|||||.|+.|.+++. .....+.+|++|+||.+.+|+++++|++||.+|++|++.+
T Consensus 194 Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~ 273 (902)
T PRK10517 194 GDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAG 273 (902)
T ss_pred CCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHH
Confidence 9999999999999888999999999999999998753 2345678899999999999999999999999999999999
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhh
Q psy3624 262 LTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMA 341 (1010)
Q Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~ 341 (1010)
++...+.+++|+++.++++.++++.++++++.+.++++...+.+|.+++.+++++++++|||+||++++++++.++.+|+
T Consensus 274 ~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~ma 353 (902)
T PRK10517 274 RVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLS 353 (902)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 99888888999999999999988887777777666666555567889999999999999999999999999999999999
Q ss_pred cccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCc
Q psy3624 342 SKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRA 421 (1010)
Q Consensus 342 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~ 421 (1010)
|+|+++|+++++|+||++|+||||||||||+|+|+|.++... . + ...+.++..+++|+..
T Consensus 354 k~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~------~------~--------~~~~~ll~~a~l~~~~ 413 (902)
T PRK10517 354 KQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI------S------G--------KTSERVLHSAWLNSHY 413 (902)
T ss_pred hCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC------C------C--------CCHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999876310 0 0 0012345555554422
Q ss_pred cccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHH
Q psy3624 422 EFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERI 501 (1010)
Q Consensus 422 ~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~i 501 (1010)
. ...|||+|.|++++++... ....+..++.+.++||||++|+|+++++..++.+.+++||+||.+
T Consensus 414 ~-------------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~i 478 (902)
T PRK10517 414 Q-------------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEI 478 (902)
T ss_pred C-------------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHH
Confidence 1 1147999999999876532 223445678889999999999999888777777889999999999
Q ss_pred HHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCC
Q psy3624 502 LDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDP 581 (1010)
Q Consensus 502 l~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~ 581 (1010)
+++|+++..++...+++++.++++.+..++++++|+|++++|||.++.++.. . + ...|.|++|+|+++++||
T Consensus 479 l~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~----~---~-~~~e~~l~~lGli~~~Dp 550 (902)
T PRK10517 479 LNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD----Y---Q-RADESDLILEGYIAFLDP 550 (902)
T ss_pred HHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccc----c---c-cccccCceeeehHhhhCc
Confidence 9999998888888899999999999999999999999999999987653210 0 0 113679999999999999
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCC
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMT 661 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 661 (1010)
+||+++++|++|+++||+++|+|||++.||.++|+++||..+ .+++|.+++.++
T Consensus 551 ~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~--------------------------~v~~G~el~~l~ 604 (902)
T PRK10517 551 PKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG--------------------------EVLIGSDIETLS 604 (902)
T ss_pred chhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc--------------------------CceeHHHHHhCC
Confidence 999999999999999999999999999999999999999532 278999999999
Q ss_pred HHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCC
Q psy3624 662 TEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDN 741 (1010)
Q Consensus 662 ~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~ 741 (1010)
++++.+.+++.. +|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|.||++||+|+.+||
T Consensus 605 ~~el~~~~~~~~--VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~ 681 (902)
T PRK10517 605 DDELANLAERTT--LFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKS 681 (902)
T ss_pred HHHHHHHHhhCc--EEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCC
Confidence 999999999888 99999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccCCCcccccC
Q psy3624 742 FASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRR 821 (1010)
Q Consensus 742 ~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~ 821 (1010)
+..|++++++||++|+||+|++.|.++.|+.+++.++++.++..++|++|+|+||+|+++| +|+++|++|||++++|++
T Consensus 682 ~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~ 760 (902)
T PRK10517 682 LMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQK 760 (902)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcC
Confidence 9999999999999999999999999999999998888777765448999999999999999 689999999999999999
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhcccc
Q psy3624 822 HPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKIL 901 (1010)
Q Consensus 822 ~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1010)
||+ ++. .. +...+...|++++++.+.+|++.++..++.. . . .+
T Consensus 761 p~r-~~~-~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~------------~-------~~--- 803 (902)
T PRK10517 761 PQR-WNP-AD-----LGRFMVFFGPISSIFDILTFCLMWWVFHANT--------P------------E-------TQ--- 803 (902)
T ss_pred CCC-CCH-HH-----HHHHHHHHHHHHHHHHHHHHHHHHHHccccc--------h------------h-------hH---
Confidence 987 221 11 2223344677777777777765543211100 0 0 00
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhccCccccccCccChhHHHHHHHHHHHHHHHhccc--cccccccccccC--chhHHH
Q psy3624 902 EYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGMNNWVLNFGIVFETVAACIVSYCP--GMDEILKTYPVR--AEWWLP 977 (1010)
Q Consensus 902 ~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip--~l~~~f~~~~l~--~~~wl~ 977 (1010)
...++.+|.+++++|+++.+++|+++.++| +|++.+.+++++++++++.+|+| +++.+|++.|++ +..|++
T Consensus 804 -~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~ 878 (902)
T PRK10517 804 -TLFQSGWFVVGLLSQTLIVHMIRTRRIPFI----QSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLV 878 (902)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhhccCCCCcc----cchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHH
Confidence 024567799999999999999999865433 67888888899999999999999 899999999999 567777
Q ss_pred HHHHHHHHHHHHHHHHH-HHhhCCCCcc
Q psy3624 978 AVPFAIVIFIYDECRRF-WLRTHPNGWV 1004 (1010)
Q Consensus 978 ~l~~~~~~l~~~e~~K~-~~r~~~~~~~ 1004 (1010)
+++++.+ ++.|+.|. +.|+|. |+
T Consensus 879 ~~~~~~~--~~~e~~K~~~~~~~~--~~ 902 (902)
T PRK10517 879 AILAGYM--TLTQLVKGFYSRRYG--WQ 902 (902)
T ss_pred HHHHHHH--HHHHHHHHHHHHhhc--CC
Confidence 7766655 44556555 556663 75
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=4.5e-131 Score=1227.07 Aligned_cols=876 Identities=28% Similarity=0.406 Sum_probs=735.9
Q ss_pred CCHHHHHHHhCCCccCCCC--HHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcccc
Q psy3624 35 LPLKDLCARYQTSAEKGLT--SAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISE 112 (1010)
Q Consensus 35 ~~~~~~~~~l~~~~~~GLs--~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~ 112 (1010)
.+.+++++.|++|.++||| ++||++|+++||+|+++.+++.++|.+++++|.+++.++++++++++++..........
T Consensus 42 ~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~ 121 (941)
T TIGR01517 42 GGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGK 121 (941)
T ss_pred CCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhccccccc
Confidence 3789999999999989999 99999999999999999988889999999999999999999999888876432110001
Q ss_pred ccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhc-cCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeeccc
Q psy3624 113 DASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNM-VPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPAD 191 (1010)
Q Consensus 113 ~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~-~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD 191 (1010)
......|+.+++++++++++.++++++|+++++..++++++ .+++++|+|||++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 201 (941)
T TIGR01517 122 ADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPAD 201 (941)
T ss_pred CccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEeccc
Confidence 11123566677777777888889999999999999998864 46789999999999999999999999999999999999
Q ss_pred EEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCC
Q psy3624 192 IRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDT 271 (1010)
Q Consensus 192 ~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 271 (1010)
|++++|+++.||||+|||||.|+.|.+++ .|++|+||.+.+|+++++|++||.+|++|++.+++...+ .++
T Consensus 202 ~~li~g~~l~VdES~LTGES~pv~K~~~~--------~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t 272 (941)
T TIGR01517 202 GVFISGLSLEIDESSITGESDPIKKGAPK--------DSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDT 272 (941)
T ss_pred EEEEEcCcEEEEecccCCCCCcccccCCC--------CceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCC
Confidence 99999977899999999999999998764 378999999999999999999999999999999887755 568
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHh---h-------------hhhHHHHHHHHHHhheeeccCcchHHHHHHHHH
Q psy3624 272 PIAKEIHHFMHLISAWAIFLGVTFFFLSFA---L-------------GYAWIDAVIFLIGIIVANVPEGLLATVTVCLSL 335 (1010)
Q Consensus 272 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~ 335 (1010)
|+++.++++.+.+..++++++++.+++++. . +..|.+.+..++++++++|||+||++++++++.
T Consensus 273 ~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~ 352 (941)
T TIGR01517 273 PLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAY 352 (941)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHH
Confidence 999999999998877766665555544321 1 125677889999999999999999999999999
Q ss_pred HHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHh
Q psy3624 336 TAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAG 415 (1010)
Q Consensus 336 ~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 415 (1010)
++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+..+.... . ......+++..+
T Consensus 353 ~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~--~------~~~~~~~~l~~~ 424 (941)
T TIGR01517 353 SMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLR--N------VPKHVRNILVEG 424 (941)
T ss_pred HHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccc--c------CCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987655443321100 0 011233445555
Q ss_pred hhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEe
Q psy3624 416 SLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMK 495 (1010)
Q Consensus 416 ~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~K 495 (1010)
+.|++......++ .......|||+|.|+++++...+.+....+..++.+..+||+|++|+|+++++.+++++++++|
T Consensus 425 ~~~~s~~~~~~~~---~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~K 501 (941)
T TIGR01517 425 ISLNSSSEEVVDR---GGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRK 501 (941)
T ss_pred HHhCCCCccccCC---CCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEE
Confidence 5665544221110 0113567999999999999877766666666777888999999999999998877777999999
Q ss_pred CChHHHHHhccccc-cCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEE
Q psy3624 496 GAPERILDRCSTMK-QGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLG 574 (1010)
Q Consensus 496 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG 574 (1010)
||||.++++|+.+. .+|...++++ .++++++.+++++++|+|++++||+.++.++++.+ +..|++|+|+|
T Consensus 502 GA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~--------~~~e~~l~~lG 572 (941)
T TIGR01517 502 GASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK--------DYPNGGLTLIG 572 (941)
T ss_pred CChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc--------cccccCcEEEE
Confidence 99999999998764 3566667776 78889999999999999999999998875443211 12468999999
Q ss_pred EEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEec
Q psy3624 575 LMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQG 654 (1010)
Q Consensus 575 ~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 654 (1010)
+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||..++ ..+++|
T Consensus 573 li~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~------------------------~~vi~G 628 (941)
T TIGR01517 573 VVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG------------------------GLAMEG 628 (941)
T ss_pred EeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC------------------------ceEeeH
Confidence 99999999999999999999999999999999999999999999997542 138999
Q ss_pred hhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcC
Q psy3624 655 SILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTAD 734 (1010)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd 734 (1010)
.+++.+.++++++.+.+.. +|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||++|+|.|+++||
T Consensus 629 ~~~~~l~~~el~~~i~~~~--Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aAD 706 (941)
T TIGR01517 629 KEFRRLVYEEMDPILPKLR--VLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASD 706 (941)
T ss_pred HHhhhCCHHHHHHHhccCe--EEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCC
Confidence 9999999999999988776 99999999999999999999999999999999999999999999999899999999999
Q ss_pred EEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccCC
Q psy3624 735 MILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEKA 814 (1010)
Q Consensus 735 ~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~ 814 (1010)
+++.+|+|..|++++++||++|+|+++++.|.+++|+..++..+++.+++.|+|++++|++|+|+++|.+|+++|++|+|
T Consensus 707 ivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~ 786 (941)
T TIGR01517 707 IILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPP 786 (941)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCc
Confidence 99999999999999999999999999999999999999998888888888899999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccch
Q psy3624 815 ESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWT 894 (1010)
Q Consensus 815 ~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (1010)
++++|++||+++ .++++++.++..+. ..|++++++.++.+++....++..... . +.
T Consensus 787 ~~~lm~~~P~~~-~~~li~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~--------~~ 842 (941)
T TIGR01517 787 TEALLDRKPIGR-NAPLISRSMWKNIL-GQAGYQLVVTFILLFAGGSIFDVSGPD--------------E--------IT 842 (941)
T ss_pred cHHHHhCCCCCC-CCCcCCHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcccCcc--------------c--------cc
Confidence 999999999865 47888888776544 467777777777666443211100000 0 00
Q ss_pred hhhcccccchhhHHHHHHHHHHHHHHHHHhhccCc-cccccCccChhHHHHHHHHHHHHHHHhccccccccccccccCch
Q psy3624 895 YASRKILEYTCHTAFFIAIVVVQWADLLICKTRYN-SLVHQGMNNWVLNFGIVFETVAACIVSYCPGMDEILKTYPVRAE 973 (1010)
Q Consensus 895 ~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~-~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip~l~~~f~~~~l~~~ 973 (1010)
++ ...+++|+.|.+++++|++|.+++|+.+. ++|+..++|++++.++++.++++++ ++|+++.+|++.|+++.
T Consensus 843 ~~----~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~--~~~~~~~~f~~~~l~~~ 916 (941)
T TIGR01517 843 SH----QQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVI--IVEFGGSFFSTVSLSIE 916 (941)
T ss_pred cc----ccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCCHH
Confidence 00 01257899999999999999999998764 4565335999998888888888744 45678899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q psy3624 974 WWLPAVPFAIVIFIYDECRRFW 995 (1010)
Q Consensus 974 ~wl~~l~~~~~~l~~~e~~K~~ 995 (1010)
+|+++++++++.+++.|+.|.+
T Consensus 917 ~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 917 QWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999985
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=6.9e-131 Score=1209.30 Aligned_cols=841 Identities=23% Similarity=0.374 Sum_probs=715.8
Q ss_pred cccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcc
Q psy3624 31 DDHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHI 110 (1010)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~ 110 (1010)
+.|..+.+++++.|+++. +|||++|+++|+++||+|+++.+++.++|+.++++|+++|.++++++++++++.
T Consensus 14 ~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~------- 85 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT------- 85 (867)
T ss_pred HHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH-------
Confidence 466889999999999984 799999999999999999999888888999999999999999999998888754
Q ss_pred ccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEe------CCeEEEEeCCCccCCcEEEecC
Q psy3624 111 SEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIR------DGQKKTILSSELVRGDVVDVKF 184 (1010)
Q Consensus 111 ~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R------~g~~~~i~~~~Lv~GDiV~l~~ 184 (1010)
+.+..+++++++++++++++++||+|++++.++++++.+++++|+| ||++++|+++||||||+|.+++
T Consensus 86 ------~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~ 159 (867)
T TIGR01524 86 ------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAA 159 (867)
T ss_pred ------hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECC
Confidence 3556778888889999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCeecccEEEEEeCceEEEeecccCCCccccccCCCc---ccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhh
Q psy3624 185 GDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASES---TTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAG 261 (1010)
Q Consensus 185 G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~---~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 261 (1010)
||+|||||++++|+++.||||+|||||.|+.|.+++. .....+.+|++|+||.+.+|+++++|++||.+|.+|++.+
T Consensus 160 Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~ 239 (867)
T TIGR01524 160 GDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI 239 (867)
T ss_pred CCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH
Confidence 9999999999999888999999999999999998753 2345578899999999999999999999999999999999
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhh
Q psy3624 262 LTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMA 341 (1010)
Q Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~ 341 (1010)
++.. ...++|+++.++++.+++..++++++++.++++...+.+|.+++.+++++++++|||+||++++++++.++++|+
T Consensus 240 ~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~ma 318 (867)
T TIGR01524 240 AATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMS 318 (867)
T ss_pred HhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHH
Confidence 9887 667899999999999998888777777666666555567888999999999999999999999999999999999
Q ss_pred cccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCc
Q psy3624 342 SKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRA 421 (1010)
Q Consensus 342 ~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~ 421 (1010)
|+|+++|+++++|+||++|+||||||||||+|+|+|.+++.... . ..+.++..+++|+..
T Consensus 319 k~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-------------------~-~~~~~l~~a~l~~~~ 378 (867)
T TIGR01524 319 KKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-------------------E-TSERVLKMAWLNSYF 378 (867)
T ss_pred hCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-------------------C-CHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999988642110 0 012344444444322
Q ss_pred cccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHH
Q psy3624 422 EFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERI 501 (1010)
Q Consensus 422 ~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~i 501 (1010)
. ...+||.|.|+++++... .....+..++.+.++||+|++|+|+++++..++.+++++||+||.+
T Consensus 379 ~-------------~~~~~p~~~Al~~~~~~~--~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~i 443 (867)
T TIGR01524 379 Q-------------TGWKNVLDHAVLAKLDES--AARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEM 443 (867)
T ss_pred C-------------CCCCChHHHHHHHHHHhh--chhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHH
Confidence 1 113589999999987653 2223445678889999999999999988766666889999999999
Q ss_pred HHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCC
Q psy3624 502 LDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDP 581 (1010)
Q Consensus 502 l~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~ 581 (1010)
+++|+++..++...+++++.++++++..++++++|+|++++|+|.++.++.. . .+..|.+++|+|+++++||
T Consensus 444 l~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~----~----~~~~e~~l~~lGli~l~Dp 515 (867)
T TIGR01524 444 LTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD----F----TKTDEEQLIIEGFLGFLDP 515 (867)
T ss_pred HHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc----c----cccccCCcEEEEEEEeeCC
Confidence 9999998888888899999899999999999999999999999988654210 0 0113678999999999999
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCC
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMT 661 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 661 (1010)
+|++++++|++|+++||+++|+|||+..||.++|+++||..+ .+++|.+++.++
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~--------------------------~v~~g~~l~~~~ 569 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN--------------------------DFLLGADIEELS 569 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC--------------------------CeeecHhhhhCC
Confidence 999999999999999999999999999999999999999632 278999999999
Q ss_pred HHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCC
Q psy3624 662 TEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDN 741 (1010)
Q Consensus 662 ~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~ 741 (1010)
++++.+.+++.+ +|||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|.+|++||+|+.+++
T Consensus 570 ~~el~~~~~~~~--vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~ 646 (867)
T TIGR01524 570 DEELARELRKYH--IFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKS 646 (867)
T ss_pred HHHHHHHhhhCe--EEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCC
Confidence 999999998887 99999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccCCCcccccC
Q psy3624 742 FASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRR 821 (1010)
Q Consensus 742 ~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~ 821 (1010)
+..|++++++||++|+|+++++.|.++.|+.+++.++++.++..++|++|+|++|+|+++| +|+++|++|||++++|++
T Consensus 647 ~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~ 725 (867)
T TIGR01524 647 LMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKK 725 (867)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCC
Confidence 9999999999999999999999999999999998888777776669999999999999999 799999999999999986
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhcccc
Q psy3624 822 HPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKIL 901 (1010)
Q Consensus 822 ~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1010)
||+ ++. +. + ...+...|++.++..+.+|++.++..+.. .+ ..
T Consensus 726 p~~-~~~-~~----~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~------------------~~---- 767 (867)
T TIGR01524 726 PHQ-WEQ-KG----M-GRFMLCIGPVSSIFDIATFLLMWFVFSAN---------TV------------------EE---- 767 (867)
T ss_pred CCC-CCh-hh----H-HHHHHHHHHHHHHHHHHHHHHHHHHhccc---------ch------------------hh----
Confidence 665 443 22 2 22233467777666666665543211100 00 00
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhccCccccccCccChhHHHHHHHHHHHHHHHhcccc--ccccccccccCch--hHHH
Q psy3624 902 EYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGMNNWVLNFGIVFETVAACIVSYCPG--MDEILKTYPVRAE--WWLP 977 (1010)
Q Consensus 902 ~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip~--l~~~f~~~~l~~~--~wl~ 977 (1010)
....+|.+|.+++++|+++.+++|+++.++| +|++++.+++++++++++++|+|+ ++.+|++.|+|+. .|++
T Consensus 768 ~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~----~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~ 843 (867)
T TIGR01524 768 QALFQSGWFVVGLLSQTLVVHMIRTEKIPFI----QSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLI 843 (867)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhCcCCCCcC----cchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHH
Confidence 0124788999999999999999999865543 688899999999999999999997 4889999988654 5766
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCc
Q psy3624 978 AVPFAIVIFIYDECRRFWLRTHPNGW 1003 (1010)
Q Consensus 978 ~l~~~~~~l~~~e~~K~~~r~~~~~~ 1003 (1010)
+++++++ ++.|+.|.+..|..+.|
T Consensus 844 ~~~~~~~--~~~e~~k~~~~~~~~~~ 867 (867)
T TIGR01524 844 AILVGYM--ATMQLVKTFYIRRFGEW 867 (867)
T ss_pred HHHHHHH--HHHHHHHHHHHHhccCC
Confidence 6665554 56677776544333434
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=4.8e-126 Score=1177.03 Aligned_cols=872 Identities=31% Similarity=0.486 Sum_probs=716.4
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEE
Q psy3624 81 LLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANV 160 (1010)
Q Consensus 81 ~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V 160 (1010)
++++|.+++.++|+++++++++...... .......|..+++++++++++++++++||+|+++++++++++.+++++|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~---~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~V 77 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEE---GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKV 77 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccc---cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 3678999999999999999987754321 1111235678888889999999999999999999999999999999999
Q ss_pred EeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEEeecccCCCccccccCCCcc---cccccccceeeeeee
Q psy3624 161 IRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASEST---TIVLEAKNLAFFSTN 237 (1010)
Q Consensus 161 ~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~---~~~~~~~n~~~~Gt~ 237 (1010)
+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.++... ..+.+.+|++|+||.
T Consensus 78 iRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~ 157 (917)
T TIGR01116 78 LRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTL 157 (917)
T ss_pred EECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCE
Confidence 99999999999999999999999999999999999998889999999999999999876321 234567799999999
Q ss_pred eeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhhH----H
Q psy3624 238 AVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFAL------GYAW----I 307 (1010)
Q Consensus 238 v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----~ 307 (1010)
+.+|+++++|++||.+|++|++.+++...+.+++|++++++++...++.+.++++++.++++... +..| .
T Consensus 158 v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 237 (917)
T TIGR01116 158 VVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAI 237 (917)
T ss_pred EecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHH
Confidence 99999999999999999999999998888888999999999999888777666665555443221 1123 3
Q ss_pred HHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCee-
Q psy3624 308 DAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEV- 386 (1010)
Q Consensus 308 ~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~- 386 (1010)
..+..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 238 ~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~ 317 (917)
T TIGR01116 238 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSS 317 (917)
T ss_pred HHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcc
Confidence 3455678899999999999999999999999999999999999999999999999999999999999999999876532
Q ss_pred -----eeecccCC-CCCchhh------hcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhc
Q psy3624 387 -----FEVDYFKD-PTGLIEK------VRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAI 454 (1010)
Q Consensus 387 -----~~~~~~~~-~~~~~~~------~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~ 454 (1010)
+..+.... +.+.... .........+..++++||++.+..++... .....|||+|.|++++++..+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~---~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 318 SSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKG---VYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred cccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCC---ceeeccChhHHHHHHHHHHcC
Confidence 11111100 0000000 00122345678899999998754322110 123468999999999988765
Q ss_pred CChH----------------HHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhccccccC-CccccC
Q psy3624 455 GDVV----------------EFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQG-DKDVEL 517 (1010)
Q Consensus 455 ~~~~----------------~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~-~~~~~l 517 (1010)
.+.. ..++.++++.++||||+||+|+++++. ++++++|+|||||.|+++|+++..+ |...++
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l 473 (917)
T TIGR01116 395 LPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPL 473 (917)
T ss_pred CCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeC
Confidence 4322 234567789999999999999998875 4668899999999999999987664 777899
Q ss_pred CHHhHHHHHHHHHHHHh-ccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHC
Q psy3624 518 DAKNRHEVEEILEQLGN-YGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSA 596 (1010)
Q Consensus 518 ~~~~~~~~~~~~~~~~~-~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~a 596 (1010)
+++.++++.+.++++++ +|+||+++|||.++.+.... ...+....+.+|+|++|+|+++++||+|++++++|++|+++
T Consensus 474 ~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~a 552 (917)
T TIGR01116 474 TDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREED-LLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTA 552 (917)
T ss_pred CHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc-ccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHC
Confidence 99999999999999999 99999999999986532111 00111122346899999999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEE
Q psy3624 597 GIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIV 676 (1010)
Q Consensus 597 Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 676 (1010)
|++++|+|||+..||.++|+++|+..++.+ .....++|.++..+.+++......+.. |
T Consensus 553 GI~v~miTGD~~~tA~~ia~~~gi~~~~~~--------------------v~~~~~~g~~l~~~~~~~~~~~~~~~~--v 610 (917)
T TIGR01116 553 GIRVIMITGDNKETAEAICRRIGIFSPDED--------------------VTFKSFTGREFDEMGPAKQRAACRSAV--L 610 (917)
T ss_pred CCEEEEecCCCHHHHHHHHHHcCCCCCCcc--------------------ccceeeeHHHHhhCCHHHHHHhhhcCe--E
Confidence 999999999999999999999999754311 112368888888888887777665544 9
Q ss_pred EEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhH
Q psy3624 677 FARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIF 756 (1010)
Q Consensus 677 ~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~ 756 (1010)
|||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++.+|++||+++.+|+|..|.+++++||++|
T Consensus 611 ~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~ 689 (917)
T TIGR01116 611 FSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIY 689 (917)
T ss_pred EEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccCCCcccccCCCCCCCCCCccchHH
Q psy3624 757 DNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRRHPRNPVTDKLVTGKL 836 (1010)
Q Consensus 757 ~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~~p~~~~~~~l~~~~~ 836 (1010)
+|+++++.|.++.|+..++.++++.+++.|.|++++|++|+|+++|.+|+++|++++|++++|++||+++ .++++++++
T Consensus 690 ~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~-~~~l~~~~~ 768 (917)
T TIGR01116 690 NNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRP-DEPLITGWL 768 (917)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCC-CCCcccHHH
Confidence 9999999999999999999999998999999999999999999999999999999999999999999865 579999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHH
Q psy3624 837 LFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVV 916 (1010)
Q Consensus 837 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~ 916 (1010)
+..+ ...|+++++++++.|++.+...++....... .+++++..+.. ........+++|++|.+++++
T Consensus 769 ~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~~t~~f~~~v~~ 835 (917)
T TIGR01116 769 FFRY-LVVGVYVGLATVGGFVWWYLLTHFTGCDEDS---------FTTCPDFEDPD---CYVFEGKQPARTISLSVLVVI 835 (917)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhhcCcccccccc---------ccccccccccc---ccccccccchHHHHHHHHHHH
Confidence 7654 4578888888777776654322322111000 00000000000 000000135789999999999
Q ss_pred HHHHHHHhhccCccccccC-ccChhHHHHHHHHHHHHHHHhccccccccccccccCchhHHHHHHHHHHHHHHHHHHHHH
Q psy3624 917 QWADLLICKTRYNSLVHQG-MNNWVLNFGIVFETVAACIVSYCPGMDEILKTYPVRAEWWLPAVPFAIVIFIYDECRRFW 995 (1010)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~-~~n~~~~~~i~~~~~~~~~~~~ip~l~~~f~~~~l~~~~wl~~l~~~~~~l~~~e~~K~~ 995 (1010)
|++|.+++|+++.++|+.+ ++|++++++++++++++++++|+|+++.+|++.|+++.+|+++++++++.++++|++|++
T Consensus 836 q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 915 (917)
T TIGR01116 836 EMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFF 915 (917)
T ss_pred HHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888755 599999999999999999999999999999999999999999999999999999999987
Q ss_pred Hh
Q psy3624 996 LR 997 (1010)
Q Consensus 996 ~r 997 (1010)
+|
T Consensus 916 ~~ 917 (917)
T TIGR01116 916 SR 917 (917)
T ss_pred hC
Confidence 64
No 13
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=7.4e-117 Score=1072.10 Aligned_cols=751 Identities=27% Similarity=0.443 Sum_probs=633.5
Q ss_pred CCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhh
Q psy3624 51 GLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCI 130 (1010)
Q Consensus 51 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~ 130 (1010)
|||++||++|+++||+|++++ ++.+.|..|+++|++|+.++++++++++++. +.+..+++++++++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------------~~~~~~~~i~~~~~ 66 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------------ENWVDFVIILGLLL 66 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------------cchhhhhhhhhhhH
Confidence 899999999999999999997 4467889999999999999999998888765 24556777888888
Q ss_pred hHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEEeecccCC
Q psy3624 131 ITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVDNSSLTGE 210 (1010)
Q Consensus 131 i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vdes~LTGE 210 (1010)
+++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||++++|+++.||||+||||
T Consensus 67 i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGE 146 (755)
T TIGR01647 67 LNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGE 146 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998789999999999
Q ss_pred CccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHH
Q psy3624 211 AEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIF 290 (1010)
Q Consensus 211 s~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 290 (1010)
|.|+.|.++ |.+|+||.+.+|+++++|++||.+|++|++.+++++.+..++|+++.++++..+++.++++
T Consensus 147 S~PV~K~~~----------~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~ 216 (755)
T TIGR01647 147 SLPVTKKTG----------DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGV 216 (755)
T ss_pred ccceEeccC----------CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999876 4599999999999999999999999999999999888888899999999999998888777
Q ss_pred HHHHHHHHHHh-hhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcc
Q psy3624 291 LGVTFFFLSFA-LGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGT 369 (1010)
Q Consensus 291 ~~~~~~~~~~~-~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGT 369 (1010)
++++.+++++. .+.+|.+++.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||
T Consensus 217 ~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGT 296 (755)
T TIGR01647 217 LVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGT 296 (755)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCc
Confidence 77777766665 56788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHH
Q psy3624 370 LTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKF 449 (1010)
Q Consensus 370 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~ 449 (1010)
||+|+|+|.+++..+.. .+.++++..+++|+.. ..++|.|.|++++
T Consensus 297 LT~~~~~v~~~~~~~~~-------------------~~~~~~l~~a~~~~~~---------------~~~~pi~~Ai~~~ 342 (755)
T TIGR01647 297 LTLNKLSIDEILPFFNG-------------------FDKDDVLLYAALASRE---------------EDQDAIDTAVLGS 342 (755)
T ss_pred cccCceEEEEEEecCCC-------------------CCHHHHHHHHHHhCCC---------------CCCChHHHHHHHH
Confidence 99999999998754210 0112345555556521 1358999999998
Q ss_pred HHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCC-CeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHH
Q psy3624 450 SELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPN-NEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEI 528 (1010)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~ 528 (1010)
+...+ ..+..++....+||++.+|+|+++++..+ ++.++++||+||.++++|+. .++.++++++.
T Consensus 343 ~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~----------~~~~~~~~~~~ 408 (755)
T TIGR01647 343 AKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDN----------KKEIEEKVEEK 408 (755)
T ss_pred HHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCC----------cHHHHHHHHHH
Confidence 76421 23455778889999999999988877653 67788999999999999974 23456778888
Q ss_pred HHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCH
Q psy3624 529 LEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHP 608 (1010)
Q Consensus 529 ~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~ 608 (1010)
+++++++|+|++++|++. .|.+++|+|+++++||+||+++++|++|+++||+++|+|||++
T Consensus 409 ~~~~~~~G~rvl~vA~~~-------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~ 469 (755)
T TIGR01647 409 VDELASRGYRALGVARTD-------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHL 469 (755)
T ss_pred HHHHHhCCCEEEEEEEEc-------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCH
Confidence 999999999999999872 1468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHH
Q psy3624 609 VTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHI 688 (1010)
Q Consensus 609 ~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~i 688 (1010)
.||+++|+++||..... . ...+.+|.+.+.++++++.+.+++.+ +|+|++|+||.++
T Consensus 470 ~tA~~IA~~lGI~~~~~-~--------------------~~~l~~~~~~~~~~~~~~~~~~~~~~--vfAr~~Pe~K~~i 526 (755)
T TIGR01647 470 AIAKETARRLGLGTNIY-T--------------------ADVLLKGDNRDDLPSGELGEMVEDAD--GFAEVFPEHKYEI 526 (755)
T ss_pred HHHHHHHHHcCCCCCCc-C--------------------HHHhcCCcchhhCCHHHHHHHHHhCC--EEEecCHHHHHHH
Confidence 99999999999964210 0 00123445556677888999998888 9999999999999
Q ss_pred HHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHh
Q psy3624 689 VEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLA 768 (1010)
Q Consensus 689 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~ 768 (1010)
|+.+|++|++|+|+|||.||+|||++|||||||| +|+|.+|++||+|+.+|++.+|++++++||++|+|+++++.|.++
T Consensus 527 V~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~ 605 (755)
T TIGR01647 527 VEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIA 605 (755)
T ss_pred HHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHH
Q psy3624 769 SNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIE 848 (1010)
Q Consensus 769 ~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~ 848 (1010)
.|+..++.+++..++ ++.|++|+|++|+|+++|. +++++++|++++ |++|+.+.+ ++++.. ....|++.
T Consensus 606 ~n~~~~~~~~~~~l~-~~~~l~~~~il~~~l~~d~-~~~~l~~~~~~~------~~~p~~~~~--~~~~~~-~~~~g~~~ 674 (755)
T TIGR01647 606 ETIRIVFFFGLLILI-LNFYFPPIMVVIIAILNDG-TIMTIAYDNVKP------SKLPQRWNL--REVFTM-STVLGIYL 674 (755)
T ss_pred ccHHHHHHHHHHHHH-hCcchhHHHHHHHHHHHhH-hHhhccCCCCCC------CCCCCccch--HHHHHH-HHHHHHHH
Confidence 999988766655432 3455999999999999996 699999999874 333333443 244333 33478888
Q ss_pred HHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccC
Q psy3624 849 ACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRY 928 (1010)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~ 928 (1010)
++.++..|++.+.. ++. ...++. .+ ...+++|++|+.+++.|+++.+++|+++
T Consensus 675 ~~~~~~~~~~~~~~-~~~-~~~~~~------------------~~-------~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 727 (755)
T TIGR01647 675 VISTFLLLAIALDT-SFF-IDKFGL------------------QL-------LHGNLQSLIYLQVSISGQATIFVTRTHG 727 (755)
T ss_pred HHHHHHHHHHHHhc-ccc-hhcccc------------------cc-------cHhhhHHHHHHHHHHHHHHHHheeccCC
Confidence 88888777766521 000 000000 00 0124789999999999999999999988
Q ss_pred ccccccCccChhHHHHHHHHHHHHHHHh
Q psy3624 929 NSLVHQGMNNWVLNFGIVFETVAACIVS 956 (1010)
Q Consensus 929 ~~~~~~~~~n~~~~~~i~~~~~~~~~~~ 956 (1010)
.+ | ...+|+++++++++.+++..++.
T Consensus 728 ~~-~-~~~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 728 FF-W-SERPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred CC-c-ccCCcHHHHHHHHHHHHHHHHHh
Confidence 65 3 33478888888888888777664
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=3.6e-117 Score=1111.91 Aligned_cols=842 Identities=21% Similarity=0.255 Sum_probs=666.0
Q ss_pred cCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhh
Q psy3624 49 EKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTV 128 (1010)
Q Consensus 49 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v 128 (1010)
..|||++|+++|+++||+|+++.+ ..++|+++++++++||.++++++.+++++- ++|+.+++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------------~~~~~~~~i~~i 202 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD-------------EYYYYSLCIVFM 202 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------------hhHHHHHHHHHH
Confidence 479999999999999999999985 478999999999999998887765444321 356678888888
Q ss_pred hhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEec--CCCeecccEEEEEeCceEEEeec
Q psy3624 129 CIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVK--FGDRIPADIRIIESHGFKVDNSS 206 (1010)
Q Consensus 129 ~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~--~G~~iPaD~~ll~~~~l~Vdes~ 206 (1010)
++++.++++++++|+.+.++++.. .++.++|+|||++++|+++||||||||.|+ +|++|||||+|++|+ +.||||+
T Consensus 203 ~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~ 280 (1054)
T TIGR01657 203 SSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESM 280 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccc
Confidence 888999999999999888877654 367899999999999999999999999999 999999999999996 7999999
Q ss_pred ccCCCccccccCCCc---cc-----ccccccceeeeeeeeee-------eeEeEEEEEcCCcCchhhhhhcccCCCCCCC
Q psy3624 207 LTGEAEPQARNASES---TT-----IVLEAKNLAFFSTNAVE-------GTAKGIVILCGDNTVMGRIAGLTSGLESGDT 271 (1010)
Q Consensus 207 LTGEs~pv~K~~~~~---~~-----~~~~~~n~~~~Gt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 271 (1010)
|||||.|+.|.+.+. .. ...+.+|++|+||.+.+ |.+.|+|++||.+|..|++.+.+...+...+
T Consensus 281 LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~ 360 (1054)
T TIGR01657 281 LTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVF 360 (1054)
T ss_pred ccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCC
Confidence 999999999988542 11 12356899999999985 7899999999999999999998888788889
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchh
Q psy3624 272 PIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLE 351 (1010)
Q Consensus 272 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~ 351 (1010)
++++...++...++.++++.++.+++.....+.++...+..+++++++++|++||++++++++.++.||+|+|++||++.
T Consensus 361 ~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~ 440 (1054)
T TIGR01657 361 KFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPF 440 (1054)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcc
Confidence 99999998888776666554444444444446678899999999999999999999999999999999999999999999
Q ss_pred hhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChhhhh
Q psy3624 352 AVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQ 431 (1010)
Q Consensus 352 ~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~ 431 (1010)
++|++|++|++|||||||||+|+|+|.+++..+.....+... .. ........+..++++||+.....
T Consensus 441 ~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~a~C~~~~~~~------ 507 (1054)
T TIGR01657 441 RINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIV------TE-DSSLKPSITHKALATCHSLTKLE------ 507 (1054)
T ss_pred cceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccc------cc-ccccCchHHHHHHHhCCeeEEEC------
Confidence 999999999999999999999999999998654211100000 00 00112234677889999875322
Q ss_pred hhcccccCChhHHHHHHHHHHhcCC--h--HHH-----------hhhcceeEeecCCCCCceEEEEEEeCC-CeEEEEEe
Q psy3624 432 ILKREVMGDASEAAILKFSELAIGD--V--VEF-----------RNRHKKALEIPFNSTDKYQVSIHIMPN-NEYLLVMK 495 (1010)
Q Consensus 432 ~~~~~~~g~~~e~all~~~~~~~~~--~--~~~-----------~~~~~~~~~~~f~s~~k~~~~v~~~~~-~~~~~~~K 495 (1010)
....|||.|.|++++..+.... . ... ...++++.++||+|++|||+++++..+ +++++++|
T Consensus 508 ---~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~K 584 (1054)
T TIGR01657 508 ---GKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVK 584 (1054)
T ss_pred ---CEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEE
Confidence 1467999999999986432111 0 000 134677899999999999999988744 56789999
Q ss_pred CChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEE
Q psy3624 496 GAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGL 575 (1010)
Q Consensus 496 Ga~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~ 575 (1010)
||||.|+++|+.. ..++.+++.+++++++|+||+|+|||+++..+..... ..+++.+|+||+|+|+
T Consensus 585 GApE~Il~~c~~~-----------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~---~~~r~~~E~~L~flGl 650 (1054)
T TIGR01657 585 GAPETIQSLCSPE-----------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQ---DLSRDAVESNLTFLGF 650 (1054)
T ss_pred CCHHHHHHHcCCc-----------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhh---hccHHHHhcCceEEEE
Confidence 9999999999841 2246688889999999999999999998743221111 1123347899999999
Q ss_pred EeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHH-HHH----------------h-----
Q psy3624 576 MSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLE-DIA----------------K----- 633 (1010)
Q Consensus 576 i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~-~~~----------------~----- 633 (1010)
++++||+||+++++|++|+++||+++|+|||++.||.++|+++||..++...+. +.. +
T Consensus 651 i~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1054)
T TIGR01657 651 IVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAS 730 (1054)
T ss_pred EEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccc
Confidence 999999999999999999999999999999999999999999999765421110 000 0
Q ss_pred -hcCCccc------cCCCCCcceeEEechhhhc---CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEc
Q psy3624 634 -RRRVPVS------SLDPRESTTIVIQGSILRD---MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTG 703 (1010)
Q Consensus 634 -~~~~~~~------~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iG 703 (1010)
+...+.. .......+..+++|+.++. +.++++.+++.++. ||||++|+||.++|+.+|+.|++|+|+|
T Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~~g~~V~m~G 808 (1054)
T TIGR01657 731 TQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCG 808 (1054)
T ss_pred ccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHhCCCeEEEEe
Confidence 0000000 0001123467999999866 45567888888877 9999999999999999999999999999
Q ss_pred CCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHh
Q psy3624 704 DGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVI 783 (1010)
Q Consensus 704 Dg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~ 783 (1010)
||+||+||||+|||||||| ++ | |..+||+++.++++++|+++|++||+++.|+++.++|.+.+++...+..++..
T Consensus 809 DG~ND~~ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~-- 883 (1054)
T TIGR01657 809 DGANDCGALKQADVGISLS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILY-- 883 (1054)
T ss_pred CChHHHHHHHhcCcceeec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999998 44 4 45899999999999999999999999999999999999999988766554433
Q ss_pred ccCchhHHHHHHHHHHhhchHHHHHhcccCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3624 784 GIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQN 863 (1010)
Q Consensus 784 ~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 863 (1010)
..+.|++++|++|+|++++.+++++|++++|++++|+++|. ++++++.++..+.++ ++++.++.+..|++...+.
T Consensus 884 ~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~----~~l~~~~~~~si~~q-~~i~~~~~~~~~~~~~~~~ 958 (1054)
T TIGR01657 884 LIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP----SNLFSVYILTSVLIQ-FVLHILSQVYLVFELHAQP 958 (1054)
T ss_pred HccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC----ccccCHHHHHHHHHH-HHHHHHHHHHHHHHHhhCC
Confidence 34588999999999999999999999999999999999985 589999888776654 5777888888887766544
Q ss_pred CCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccccCc-cChhHH
Q psy3624 864 GWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGM-NNWVLN 942 (1010)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~-~n~~~~ 942 (1010)
|+.+..... .+..+ ......|+.| .++.+|.+..+++++.+ ++|++++ +|++++
T Consensus 959 ~~~~~~~~~------------~~~~~-----------~~~~~~T~~f-~~~~~~~~~~~~~~~~g-~pf~~~~~~N~~~~ 1013 (1054)
T TIGR01657 959 WYKPENPVD------------LEKEN-----------FPNLLNTVLF-FVSSFQYLITAIVNSKG-PPFREPIYKNKPFV 1013 (1054)
T ss_pred CccCCCCCC------------ccccc-----------CccHHHHHHH-HHHHHHHHHheEEEcCC-cchhhhHHHhHHHH
Confidence 443211000 00000 0113468888 44455666667777764 5687776 999998
Q ss_pred HHHHHHHHHHHH--HhccccccccccccccCch
Q psy3624 943 FGIVFETVAACI--VSYCPGMDEILKTYPVRAE 973 (1010)
Q Consensus 943 ~~i~~~~~~~~~--~~~ip~l~~~f~~~~l~~~ 973 (1010)
+++++.+++++. +.++|.++.+|++.|+|..
T Consensus 1014 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1046 (1054)
T TIGR01657 1014 YLLITGLGLLLVLLLDPHPLLGKILQIVPLPQE 1046 (1054)
T ss_pred HHHHHHHHHHHHhhhCCCHHHHhhheeeeCCHH
Confidence 888877666653 3378999999999999854
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.6e-104 Score=999.45 Aligned_cols=875 Identities=20% Similarity=0.219 Sum_probs=653.6
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHHHHHHH
Q psy3624 64 DGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKS 143 (1010)
Q Consensus 64 ~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~ 143 (1010)
|..|.+... +|++|+++++.++++|.++.++++++..++++++..++. +.+...++++++++++++.++++++++
T Consensus 1 ~~~N~i~ts-kY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~----~~~t~~~pL~~v~~~~~~~~~~ed~~r 75 (1057)
T TIGR01652 1 FCSNKISTT-KYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT----YRGTSIVPLAFVLIVTAIKEAIEDIRR 75 (1057)
T ss_pred CCCCcccCc-cCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC----CccHhHHhHHHHHHHHHHHHHHHHHHH
Confidence 567888864 599999999999999999999999888888877654322 345567788888889999999999999
Q ss_pred HHHHHHhhhccCCceEEEeC-CeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCc----eEEEeecccCCCccccccC
Q psy3624 144 ARIMDSFKNMVPQYANVIRD-GQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHG----FKVDNSSLTGEAEPQARNA 218 (1010)
Q Consensus 144 ~~~~~~l~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~----l~Vdes~LTGEs~pv~K~~ 218 (1010)
+++.++.+ .+.++|+|+ |++++++|+||+|||+|.|++||+||||++++++++ +.||||+|||||.|+.|++
T Consensus 76 ~~~d~~~n---~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~ 152 (1057)
T TIGR01652 76 RRRDKEVN---NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQA 152 (1057)
T ss_pred HHhHHHHh---CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeec
Confidence 98887654 478999997 899999999999999999999999999999999765 8999999999999999976
Q ss_pred CCc--------------------------------------ccccccccceeeeeeeeee-eeEeEEEEEcCCcCchhhh
Q psy3624 219 SES--------------------------------------TTIVLEAKNLAFFSTNAVE-GTAKGIVILCGDNTVMGRI 259 (1010)
Q Consensus 219 ~~~--------------------------------------~~~~~~~~n~~~~Gt~v~~-g~~~~~V~~tG~~T~~g~i 259 (1010)
... ...+++.+|++++||.+.+ |+++|+|++||++|++++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n 232 (1057)
T TIGR01652 153 LEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN 232 (1057)
T ss_pred chhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc
Confidence 421 1124567899999999999 9999999999999988775
Q ss_pred hhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hH---------------HHHHHHHHHhhee
Q psy3624 260 AGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGY-----AW---------------IDAVIFLIGIIVA 319 (1010)
Q Consensus 260 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~i~~l~~ 319 (1010)
. ...+.++++++++++++..+++.+.++++++.+++...+.. .| ...+..++.++..
T Consensus 233 ~---~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~ 309 (1057)
T TIGR01652 233 A---TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSS 309 (1057)
T ss_pred C---CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhh
Confidence 4 34567789999999999998887777777666655432211 12 2366678889999
Q ss_pred eccCcchHHHHHHHHHHH------HHhhcc----cceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeee
Q psy3624 320 NVPEGLLATVTVCLSLTA------KRMASK----NCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEV 389 (1010)
Q Consensus 320 ~iP~~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~ 389 (1010)
++|++|+++++++++.++ .+|.++ ++++|+++++|+||+|++||+|||||||+|+|+++++++++..|..
T Consensus 310 ~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~ 389 (1057)
T TIGR01652 310 LIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGD 389 (1057)
T ss_pred hcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecC
Confidence 999999999999999999 778764 5999999999999999999999999999999999999999888763
Q ss_pred cccC------CCCC---------------------chh-----hhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccc
Q psy3624 390 DYFK------DPTG---------------------LIE-----KVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREV 437 (1010)
Q Consensus 390 ~~~~------~~~~---------------------~~~-----~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~ 437 (1010)
+... +..+ ... .....+...+++.++++||++....+++. +....+.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~-~~~~~y~ 468 (1057)
T TIGR01652 390 GFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDG-PEEITYQ 468 (1057)
T ss_pred CcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCC-CCceEEE
Confidence 2110 0000 000 00011234568889999999875531111 0001133
Q ss_pred cCChhHHHHHHHHHHhcCChH--------------HHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHH
Q psy3624 438 MGDASEAAILKFSELAIGDVV--------------EFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILD 503 (1010)
Q Consensus 438 ~g~~~e~all~~~~~~~~~~~--------------~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~ 503 (1010)
.|||+|.|++++++..+.... +....++++..+||+|+||||+++++.+++++++++|||||.|++
T Consensus 469 ~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~ 548 (1057)
T TIGR01652 469 AASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFK 548 (1057)
T ss_pred ccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHH
Confidence 589999999999987654221 112357788899999999999999998888899999999999999
Q ss_pred hccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcC--------CC------CCCCCCCCC
Q psy3624 504 RCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFEL--------KS------DPPNFPLTG 569 (1010)
Q Consensus 504 ~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~--------~~------~~~~~~e~~ 569 (1010)
+|+.. +++.++++.+.+++++++|+||+++|+|.++++++.++.+. .. +..+.+|+|
T Consensus 549 ~~~~~---------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~ 619 (1057)
T TIGR01652 549 RLSSG---------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKD 619 (1057)
T ss_pred Hhhcc---------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 99741 23456788899999999999999999999987654322110 00 001236899
Q ss_pred cEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccH-------H-------HHHhhc
Q psy3624 570 LRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETL-------E-------DIAKRR 635 (1010)
Q Consensus 570 l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~-------~-------~~~~~~ 635 (1010)
|+|+|+++++|++|++++++|++|+++||++||+|||+.+||.++|++||+.+++.+.+ . .+.+..
T Consensus 620 L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~ 699 (1057)
T TIGR01652 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGL 699 (1057)
T ss_pred CEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987553210 0 000000
Q ss_pred C---CccccCCCCCcceeEEechhhhcCCHH----HHHHHHhccCcEEEEecChhhHHHHHHHHHHc-CCeEEEEcCCcc
Q psy3624 636 R---VPVSSLDPRESTTIVIQGSILRDMTTE----QLENVLRTHREIVFARTSPTQKLHIVEGCQRL-GAIVAVTGDGVN 707 (1010)
Q Consensus 636 ~---~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-g~~v~~iGDg~N 707 (1010)
. .............++++|+.++.+..+ ++.+++.+++.+||||++|+||.++|+.+|+. |++|+|+|||.|
T Consensus 700 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~N 779 (1057)
T TIGR01652 700 EGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGAN 779 (1057)
T ss_pred HHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 0 000001113345689999988765433 45667778888999999999999999999997 999999999999
Q ss_pred CHHHhhhCCceEeeCCCCCH--HHHhhcCEEecCCCchhHHHHH-HHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhc
Q psy3624 708 DSPALKKADIGIAMGITGSD--VSKQTADMILLDDNFASIVTGV-EEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIG 784 (1010)
Q Consensus 708 D~~~l~~A~vgIamg~~~~~--~ak~aAd~vl~~~~~~~i~~~i-~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~ 784 (1010)
|++||++|||||++ .|.| .|+.+||+++.+ |..+.+++ .|||++|+|+++++.|.++.|+..+++.+++.++.
T Consensus 780 D~~mlk~AdVGIgi--~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~ 855 (1057)
T TIGR01652 780 DVSMIQEADVGVGI--SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYN 855 (1057)
T ss_pred cHHHHhhcCeeeEe--cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999965 5666 589999999974 99999987 89999999999999999999999988888877764
Q ss_pred cC---chhHHHHHHHHHHhhchHHHHHhcc--cCCCcccccCCCCC---CCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q psy3624 785 IP---LPLGVVAILCIDLGTDMWPAISLAY--EKAESDIMRRHPRN---PVTDKLVTGKLLFVAYGQIGVIEACAGFFSY 856 (1010)
Q Consensus 785 ~~---~pl~~~~il~~~l~~~~l~~~~l~~--~~~~~~~m~~~p~~---~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~ 856 (1010)
.. .++.+++++|+|++++.+|+++++. +++++++|.++|+. .+.+++++.+.+.. |...|++++++.++..
T Consensus 856 ~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~-~~~~~~~~~~ii~~~~ 934 (1057)
T TIGR01652 856 GFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWG-WMLDGIYQSLVIFFFP 934 (1057)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHH-HHHHHHHHHHHHHHHH
Confidence 32 4678899999999999999999964 45778899999972 23466777766554 4457888888777655
Q ss_pred HHHHHhcCCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccccCc
Q psy3624 857 FVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGM 936 (1010)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~ 936 (1010)
++.+... .... +++ ... .....++.|..+++...+..+.. +++ |
T Consensus 935 ~~~~~~~-----~~~~--~g~-----------~~~----------~~~~~~~~~~~~~~~~~~~~~~~-~~~---w---- 978 (1057)
T TIGR01652 935 MFAYILG-----DFVS--SGS-----------LDD----------FSSVGVIVFTALVVIVNLKIALE-INR---W---- 978 (1057)
T ss_pred HHHHcCC-----cccc--CCc-----------ccc----------hhhHHHHHHHHHHHHHHHHHHHH-HhH---h----
Confidence 5443210 0000 000 000 11234666777776655555432 221 1
Q ss_pred cChhHHHHHHHHHHHHHHHhc----ccccccc---ccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q psy3624 937 NNWVLNFGIVFETVAACIVSY----CPGMDEI---LKTYPVRAEWWLPAVPFAIVIFIYDECRRFWLRTHPN 1001 (1010)
Q Consensus 937 ~n~~~~~~i~~~~~~~~~~~~----ip~l~~~---f~~~~l~~~~wl~~l~~~~~~l~~~e~~K~~~r~~~~ 1001 (1010)
+|+.++++++++++.+++.+ ++.-... +...--++.+|+.+++..++.++.+-+.|.++|.+..
T Consensus 979 -t~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 979 -NWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 12222333333333222211 1110011 1111124678988888888888899999998886654
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=4e-99 Score=938.39 Aligned_cols=773 Identities=19% Similarity=0.211 Sum_probs=597.7
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHHHHHH
Q psy3624 63 RDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQEAK 142 (1010)
Q Consensus 63 ~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k 142 (1010)
+|..|.+... +|++|+|++++++++|.++.++++++..+++.++..++ .+.++..++++++++++++.+.+++++
T Consensus 86 ~f~~N~i~Ts-KYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~----~~~~t~~~PL~~vl~v~~ike~~Ed~~ 160 (1178)
T PLN03190 86 EFAGNSIRTA-KYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV----FGRGASILPLAFVLLVTAVKDAYEDWR 160 (1178)
T ss_pred cCCCCeeecc-ccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc----CCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5888999875 59999999999999999999999999998888775443 234566788888899999999999998
Q ss_pred HHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCc----eEEEeecccCCCccccccC
Q psy3624 143 SARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHG----FKVDNSSLTGEAEPQARNA 218 (1010)
Q Consensus 143 ~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~----l~Vdes~LTGEs~pv~K~~ 218 (1010)
++++.++.+ ++.++|+|+|++++++|++|+|||+|.|++||++|||++++++++ +.||||+|||||.|+.|.+
T Consensus 161 r~k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 161 RHRSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 888877765 467999999999999999999999999999999999999998554 7999999999999999986
Q ss_pred CCcc-----------------------------------cccccccceeeeeeeeeee-eEeEEEEEcCCcCchhhhhhc
Q psy3624 219 SEST-----------------------------------TIVLEAKNLAFFSTNAVEG-TAKGIVILCGDNTVMGRIAGL 262 (1010)
Q Consensus 219 ~~~~-----------------------------------~~~~~~~n~~~~Gt~v~~g-~~~~~V~~tG~~T~~g~i~~~ 262 (1010)
++.. ..++..+|++++|+.+.+. .++|+|++||++|+. +..
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~---~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKA---MLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhH---hhc
Confidence 5321 1234557888888888874 799999999999964 334
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hh------hH-----------------------HHHH
Q psy3624 263 TSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFAL---GY------AW-----------------------IDAV 310 (1010)
Q Consensus 263 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~-----------------------~~~~ 310 (1010)
...++.+.+++++++|++..+++.+.++++++.+++...+ +. .| ...+
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 394 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTF 394 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 4456678999999999999888877777766655443211 00 00 1112
Q ss_pred HHHHHhheeeccCcchHHHHHHHHHHHHHhhccc----------ceecchhhhhhcCCceEEEecCCcccccCceEEEEE
Q psy3624 311 IFLIGIIVANVPEGLLATVTVCLSLTAKRMASKN----------CVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHL 380 (1010)
Q Consensus 311 ~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~ 380 (1010)
...+.++..++|++|++.++++...++.++.++. +.+|+.+.+|+||+|++||+|||||||+|+|+++++
T Consensus 395 ~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~ 474 (1178)
T PLN03190 395 LMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCA 474 (1178)
T ss_pred HHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEE
Confidence 2234566688999999999999988888886544 789999999999999999999999999999999999
Q ss_pred EeCCeeeeecccCC----------CCCc-------h------hh----h---cCchhHHHHHHHhhhcCCccccCChh-h
Q psy3624 381 SFDKEVFEVDYFKD----------PTGL-------I------EK----V---RNMSSYKDLTLAGSLCNRAEFTPNQE-K 429 (1010)
Q Consensus 381 ~~~~~~~~~~~~~~----------~~~~-------~------~~----~---~~~~~~~~l~~~~~lc~~~~~~~~~~-~ 429 (1010)
++++..|+.+.... ..+. . .. . .......+++.++++||++.....++ +
T Consensus 475 ~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~ 554 (1178)
T PLN03190 475 SIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTS 554 (1178)
T ss_pred EECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCC
Confidence 99888775321000 0000 0 00 0 00122456889999999987532111 0
Q ss_pred hhh-hccccc-CChhHHHHHHHHHHhcC------------ChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEe
Q psy3624 430 IQI-LKREVM-GDASEAAILKFSELAIG------------DVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMK 495 (1010)
Q Consensus 430 ~~~-~~~~~~-g~~~e~all~~~~~~~~------------~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~K 495 (1010)
.+. ....+. ++|+|.||++++...|. +....+..++.+..+||+|+||||+++++.+++++++|+|
T Consensus 555 ~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~K 634 (1178)
T PLN03190 555 DPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVK 634 (1178)
T ss_pred CccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEe
Confidence 000 011234 48999999999988775 3344566788999999999999999999988888999999
Q ss_pred CChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCC--------------CC
Q psy3624 496 GAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELK--------------SD 561 (1010)
Q Consensus 496 Ga~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~--------------~~ 561 (1010)
||||.|+++|+... +++.++++++.+++++++|+|||++|||.++++++.++.+.. .+
T Consensus 635 GA~e~il~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~ 706 (1178)
T PLN03190 635 GADTSMFSVIDRSL--------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRK 706 (1178)
T ss_pred cCcHHHHHhhcccc--------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHh
Confidence 99999999997532 233567788899999999999999999999876554332110 01
Q ss_pred CCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHH-----------H
Q psy3624 562 PPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLE-----------D 630 (1010)
Q Consensus 562 ~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~-----------~ 630 (1010)
..+.+|+||+++|+++++|++|++++++|++|+++||++||+|||+..||.++|++|||.+++...+. .
T Consensus 707 ~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~ 786 (1178)
T PLN03190 707 VASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKS 786 (1178)
T ss_pred hHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHH
Confidence 11346899999999999999999999999999999999999999999999999999999876532110 0
Q ss_pred HHhhc----CC--c--------cccCCCCCcceeEEechhhhcCCH----HHHHHHHhccCcEEEEecChhhHHHHHHHH
Q psy3624 631 IAKRR----RV--P--------VSSLDPRESTTIVIQGSILRDMTT----EQLENVLRTHREIVFARTSPTQKLHIVEGC 692 (1010)
Q Consensus 631 ~~~~~----~~--~--------~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l 692 (1010)
..+.. .. . ...........++++|..+..+.. +.+.++..+++.+||||++|+||+++|+.+
T Consensus 787 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~v 866 (1178)
T PLN03190 787 LEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALV 866 (1178)
T ss_pred HHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHH
Confidence 00000 00 0 000112234568999999988764 467788889998899999999999999999
Q ss_pred HHc-CCeEEEEcCCccCHHHhhhCCceEeeCCCCCH--HHHhhcCEEecCCCchhHHHHH-HHhhhhHHhHHHHHHHHHh
Q psy3624 693 QRL-GAIVAVTGDGVNDSPALKKADIGIAMGITGSD--VSKQTADMILLDDNFASIVTGV-EEGRLIFDNLKKSIAYTLA 768 (1010)
Q Consensus 693 ~~~-g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~--~ak~aAd~vl~~~~~~~i~~~i-~~gR~~~~~i~~~~~~~l~ 768 (1010)
|+. +++|+|+|||+||++||++||||| |+.|.| .|+.+||+.+.+ |..+.+++ -|||+.|+|+.+.+.|.++
T Consensus 867 k~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fY 942 (1178)
T PLN03190 867 KNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFY 942 (1178)
T ss_pred HhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 987 589999999999999999999999 557888 788999999975 66677766 4999999999999999999
Q ss_pred hhHHHHHHHHHHHHhccCc---hhHHHHHHHHHHhhchHHHHHh-cccC--CCcccccCCCCCC---CCCCccchHHHHH
Q psy3624 769 SNVPEITPFLMFIVIGIPL---PLGVVAILCIDLGTDMWPAISL-AYEK--AESDIMRRHPRNP---VTDKLVTGKLLFV 839 (1010)
Q Consensus 769 ~n~~~~~~~~~~~~~~~~~---pl~~~~il~~~l~~~~l~~~~l-~~~~--~~~~~m~~~p~~~---~~~~l~~~~~~~~ 839 (1010)
+|+..+++++++.++...+ .+..+.+.++|++++.+|.+++ .+|+ +++.++ +.|.-. +....++.+.+.
T Consensus 943 KN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~-~~P~LY~~~~~~~~~n~~~F~- 1020 (1178)
T PLN03190 943 RNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLL-KYPQLYGAGQRQEAYNSKLFW- 1020 (1178)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHH-hCcHhhhhhccCCccCHHHHH-
Confidence 9999999999888776544 3466788899999999999998 7776 444444 556322 234566665544
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy3624 840 AYGQIGVIEACAGFFSYFVIM 860 (1010)
Q Consensus 840 ~~~~~g~~~~~~~~~~~~~~~ 860 (1010)
.|...|++++++.|+..++++
T Consensus 1021 ~w~~~~i~qs~iiff~~~~~~ 1041 (1178)
T PLN03190 1021 LTMIDTLWQSAVVFFVPLFAY 1041 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 345678999988776655443
No 17
>KOG0208|consensus
Probab=100.00 E-value=9.2e-97 Score=835.15 Aligned_cols=847 Identities=20% Similarity=0.256 Sum_probs=637.7
Q ss_pred cCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhh
Q psy3624 49 EKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTV 128 (1010)
Q Consensus 49 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v 128 (1010)
..||+..++.+|+..||+|.+..+ .++.+.+++++..+||.....+. .++|.. .++++++..++++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fS----v~lW~~---------d~Y~~YA~cI~ii 223 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFS----VALWLA---------DSYYYYAFCIVII 223 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHH----hhhhhc---------ccchhhhhHHHHH
Confidence 589999999999999999999975 47899999999999987765443 333322 1467778888888
Q ss_pred hhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecC-CCeecccEEEEEeCceEEEeecc
Q psy3624 129 CIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKF-GDRIPADIRIIESHGFKVDNSSL 207 (1010)
Q Consensus 129 ~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~-G~~iPaD~~ll~~~~l~Vdes~L 207 (1010)
.+.+.+.+.|+.++..+.++++-+. +..++|+|||.+++|+++|||||||+.+.+ |-..|||+++++|+ |.||||+|
T Consensus 224 sv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmL 301 (1140)
T KOG0208|consen 224 SVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESML 301 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccc
Confidence 8889999999998887766665443 356899999999999999999999999998 99999999999998 57999999
Q ss_pred cCCCccccccCCCcccc---------cccccceeeeeeeeee------eeEeEEEEEcCCcCchhhhhhcccCCCCCCCc
Q psy3624 208 TGEAEPQARNASESTTI---------VLEAKNLAFFSTNAVE------GTAKGIVILCGDNTVMGRIAGLTSGLESGDTP 272 (1010)
Q Consensus 208 TGEs~pv~K~~~~~~~~---------~~~~~n~~~~Gt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 272 (1010)
||||.|+.|.+.+.... ....+|.+|.||.+++ +.+.++|++||.+|..|++.+.+-.++.....
T Consensus 302 TGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fk 381 (1140)
T KOG0208|consen 302 TGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFK 381 (1140)
T ss_pred cCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccH
Confidence 99999999998762211 2245789999999985 67899999999999999999998888887888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhh
Q psy3624 273 IAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEA 352 (1010)
Q Consensus 273 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~ 352 (1010)
+.+...+|...++.++++-.+...+.....|.+....++.++.++.+.+|++||+++++...++.+||.|+||.|.+++.
T Consensus 382 fyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~r 461 (1140)
T KOG0208|consen 382 FYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQR 461 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccc
Confidence 88888888877777776665555565666778889999999999999999999999999999999999999999999999
Q ss_pred hhhcCCceEEEecCCcccccCceEEEEEEeCCee-eeeccc----CCCCCch---hhhcCchhHHHHHHHhhhcCCcccc
Q psy3624 353 VETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEV-FEVDYF----KDPTGLI---EKVRNMSSYKDLTLAGSLCNRAEFT 424 (1010)
Q Consensus 353 ~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-~~~~~~----~~~~~~~---~~~~~~~~~~~l~~~~~lc~~~~~~ 424 (1010)
+...|++|++|||||||||++.+.+..+..-... ...... .+..... ...........+..+++.||.....
T Consensus 462 In~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v 541 (1140)
T KOG0208|consen 462 INLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLV 541 (1140)
T ss_pred eeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEe
Confidence 9999999999999999999999999988763211 000000 0000000 0001111234688899999965432
Q ss_pred CChhhhhhhcccccCChhHHHHHHHHHHhcCC--------------------h-----HHHh----hhcceeEeecCCCC
Q psy3624 425 PNQEKIQILKREVMGDASEAAILKFSELAIGD--------------------V-----VEFR----NRHKKALEIPFNST 475 (1010)
Q Consensus 425 ~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~--------------------~-----~~~~----~~~~~~~~~~f~s~ 475 (1010)
+....|||.|..+.+...+...+ . .... ..+.++..+||+|.
T Consensus 542 ---------~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~ 612 (1140)
T KOG0208|consen 542 ---------DGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSA 612 (1140)
T ss_pred ---------CCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchh
Confidence 23556777776665544432200 0 0000 13556788999999
Q ss_pred CceEEEEEEeC-CCeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCC
Q psy3624 476 DKYQVSIHIMP-NNEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPA 554 (1010)
Q Consensus 476 ~k~~~~v~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~ 554 (1010)
-+||++++..+ +++..+|+|||||.|.+.|+.. .....+++.++.|+.+|+|++|+|+|+++...
T Consensus 613 LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~-----------tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~--- 678 (1140)
T KOG0208|consen 613 LRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE-----------TVPADYQEVLKEYTHQGFRVIALASKELETST--- 678 (1140)
T ss_pred hheEEEEEecCCCCceEeeccCCHHHHHHhcCcc-----------cCCccHHHHHHHHHhCCeEEEEEecCccCcch---
Confidence 99999998874 5788999999999999999752 22456889999999999999999999998652
Q ss_pred CCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHh-
Q psy3624 555 GFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAK- 633 (1010)
Q Consensus 555 ~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~- 633 (1010)
+.+...-.++.+|.||+|+|++.|++++|++++.+|++|++|.||.+|+||||..||..+||+||+..+....+.-..+
T Consensus 679 ~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 679 LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 2222233445589999999999999999999999999999999999999999999999999999998755322110000
Q ss_pred ------------------hc----CCcc--ccC------CCCCcceeEEechhhhcC---CHHHHHHHHhccCcEEEEec
Q psy3624 634 ------------------RR----RVPV--SSL------DPRESTTIVIQGSILRDM---TTEQLENVLRTHREIVFART 680 (1010)
Q Consensus 634 ------------------~~----~~~~--~~~------~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~v~~r~ 680 (1010)
+. .... ... -....+.++++|..++-+ ..+.+++++.+++ |||||
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~--VfARM 836 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGT--VFARM 836 (1140)
T ss_pred CccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCe--EEeec
Confidence 00 0000 000 012246778999887644 4667888888888 99999
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHH
Q psy3624 681 SPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLK 760 (1010)
Q Consensus 681 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~ 760 (1010)
+|+||.++|+.+|+.|+.|+|||||+||+.|||+||+||+++ ..+|.-||.+.-.-.+..++.+.|++||+.+..-.
T Consensus 837 sP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLS---eaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf 913 (1140)
T KOG0208|consen 837 SPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLS---EAEASVAAPFTSKTPSISCVPDVIREGRAALVTSF 913 (1140)
T ss_pred CchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchh---hhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhH
Confidence 999999999999999999999999999999999999999986 34677789999988899999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccCCCcccccCCCCCCCCCCccchHHHHHH
Q psy3624 761 KSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRRHPRNPVTDKLVTGKLLFVA 840 (1010)
Q Consensus 761 ~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~ 840 (1010)
.+++|...|.+..++..++ ++..-..++..|.++++++.....++++...+|..++-..+|. ..|++++.+...
T Consensus 914 ~~FkYMalYs~iqFisv~~--LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~----~~L~s~~~~~~l 987 (1140)
T KOG0208|consen 914 ACFKYMALYSAIQFISVVF--LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPP----TNLLSKKILVPL 987 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhe--eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCC----ccccccchhhhh
Confidence 9999998888665543322 3344667899999999999999999999999999888777764 578888877766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHH
Q psy3624 841 YGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWAD 920 (1010)
Q Consensus 841 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~ 920 (1010)
.+|+ ++..++++..++++..++|+.+..... + .++......+++|++. +.-+++
T Consensus 988 ~~q~-vli~l~q~i~~l~~~~qpw~~pp~~~~------~------------------~nt~s~~~T~lF~vS~-fqYi~~ 1041 (1140)
T KOG0208|consen 988 LLQI-VLICLVQWILTLIVEPQPWYEPPNPQV------D------------------DNTQSSDNTSLFFVSS-FQYIFI 1041 (1140)
T ss_pred HHHH-HHHHHHHHhhheeeccccceecCCCCc------C------------------cccccceeeEeeehhH-HHHHHh
Confidence 6654 455666777777666666665432111 0 0011111223333333 333333
Q ss_pred HHHhhccCccccccCc-cChhHHHHHHHHHHHHHHHhcccccc---ccccccccCch
Q psy3624 921 LLICKTRYNSLVHQGM-NNWVLNFGIVFETVAACIVSYCPGMD---EILKTYPVRAE 973 (1010)
Q Consensus 921 ~~~~~~~~~~~~~~~~-~n~~~~~~i~~~~~~~~~~~~ip~l~---~~f~~~~l~~~ 973 (1010)
.+.. +.. ++|+++. +|+.+...+.+.....+.+++++... ..++.++++-.
T Consensus 1042 a~v~-S~g-~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~ 1096 (1140)
T KOG0208|consen 1042 ALVL-SKG-SPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTT 1096 (1140)
T ss_pred heee-ccC-CcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcc
Confidence 3322 222 5677774 89887655544444444444443321 34667777653
No 18
>KOG0205|consensus
Probab=100.00 E-value=3e-92 Score=762.40 Aligned_cols=676 Identities=25% Similarity=0.410 Sum_probs=539.7
Q ss_pred cccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcc
Q psy3624 31 DDHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHI 110 (1010)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~ 110 (1010)
+....|.++|.+.|..+. .|||++|+++|+++||+|++.+ ++.+.+..|+..+++|++++.-.++++.... .+
T Consensus 17 dl~~~p~eeVfeeL~~t~-~GLt~~E~~eRlk~fG~NkleE-kken~~lKFl~Fm~~PlswVMEaAAimA~~L-----an 89 (942)
T KOG0205|consen 17 DLEAIPIEEVFEELLCTR-EGLTSDEVEERLKIFGPNKLEE-KKESKFLKFLGFMWNPLSWVMEAAAIMAIGL-----AN 89 (942)
T ss_pred ccccCchhhhHHHHhcCC-CCCchHHHHHHHHhhCchhhhh-hhhhHHHHHHHHHhchHHHHHHHHHHHHHHH-----hc
Confidence 366889999999998874 5999999999999999999996 4567777899999999999988877655432 11
Q ss_pred ccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecc
Q psy3624 111 SEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPA 190 (1010)
Q Consensus 111 ~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPa 190 (1010)
...... .|.....+.+++++|+.++|.||+++..+.++|++.+.+++.|+|||+|.++++++||||||+.++.||+|||
T Consensus 90 g~~~~~-DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPa 168 (942)
T KOG0205|consen 90 GGGRPP-DWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPA 168 (942)
T ss_pred CCCCCc-chhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecC
Confidence 111111 2344455666778899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCC
Q psy3624 191 DIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGD 270 (1010)
Q Consensus 191 D~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 270 (1010)
|+++++++-+.||+|.|||||.|+.|.+++. +|+||+|.+|++.++|++||.+|..|+.+.++.. ....
T Consensus 169 DaRLl~gD~LkiDQSAlTGESLpvtKh~gd~----------vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~ 237 (942)
T KOG0205|consen 169 DARLLEGDPLKIDQSALTGESLPVTKHPGDE----------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQV 237 (942)
T ss_pred ccceecCCccccchhhhcCCccccccCCCCc----------eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCc
Confidence 9999999999999999999999999999987 8999999999999999999999999999999887 4556
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-hheeeccCcchHHHHHHHHHHHHHhhcccceecc
Q psy3624 271 TPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIG-IIVANVPEGLLATVTVCLSLTAKRMASKNCVVKH 349 (1010)
Q Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~ 349 (1010)
..+++-++.+..+++...++-.++.+.+.+............-+. +++..+|.++|.++++.++.++.+|+++|.++++
T Consensus 238 GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkr 317 (942)
T KOG0205|consen 238 GHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 317 (942)
T ss_pred ccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHH
Confidence 778887777766654332222222222222222222333333334 4455599999999999999999999999999999
Q ss_pred hhhhhhcCCceEEEecCCcccccCceEEEE----EEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccC
Q psy3624 350 LEAVETLGSTSTICSDKTGTLTQNRMTVTH----LSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTP 425 (1010)
Q Consensus 350 ~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~ 425 (1010)
++++|+|+.+|++|+|||||||.|+++|.+ ++.. .-+.+++++.+++.+..+
T Consensus 318 mtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~---------------------gv~~D~~~L~A~rAsr~e--- 373 (942)
T KOG0205|consen 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVK---------------------GVDKDDVLLTAARASRKE--- 373 (942)
T ss_pred HHHHHHhhCceEEeecCcCceeecceecCcCcceeeec---------------------CCChHHHHHHHHHHhhhc---
Confidence 999999999999999999999999999866 1111 112234555555544221
Q ss_pred ChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhc
Q psy3624 426 NQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRC 505 (1010)
Q Consensus 426 ~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c 505 (1010)
..|..|.|++.... +..+.+..++.++..|||+..|+.+..+..++|+....+|||||.|++.|
T Consensus 374 ------------n~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~ 437 (942)
T KOG0205|consen 374 ------------NQDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLC 437 (942)
T ss_pred ------------ChhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHh
Confidence 12667888887643 45778888999999999999999999999999999999999999999999
Q ss_pred cccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcc
Q psy3624 506 STMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPA 585 (1010)
Q Consensus 506 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~ 585 (1010)
.. +.+.++++.+.+++++++|+|.+++|++..++.. .+.......|+|+.-+-||+|.+
T Consensus 438 ~~----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~-----------~~~~g~pw~~~gllp~fdpprhd 496 (942)
T KOG0205|consen 438 NE----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT-----------KESPGGPWEFVGLLPLFDPPRHD 496 (942)
T ss_pred hc----------cCcchHHHHHHHHHHHHhcchhhhhhhhcccccc-----------ccCCCCCcccccccccCCCCccc
Confidence 74 5667889999999999999999999998776542 11234567899999999999999
Q ss_pred hHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechh-hhcCCHHH
Q psy3624 586 VPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSI-LRDMTTEQ 664 (1010)
Q Consensus 586 ~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 664 (1010)
+.++|++....|++|.|+|||...-++..++++|+-..-... . ..-|.. -..+....
T Consensus 497 sa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyps-----------------s-----~llG~~~~~~~~~~~ 554 (942)
T KOG0205|consen 497 SAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-----------------S-----ALLGLGKDGSMPGSP 554 (942)
T ss_pred hHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCc-----------------h-----hhccCCCCCCCCCCc
Confidence 999999999999999999999999999999999986521100 0 000100 01122223
Q ss_pred HHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchh
Q psy3624 665 LENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFAS 744 (1010)
Q Consensus 665 ~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~ 744 (1010)
.++++++.+ =|+.+.|++|.++|+.||+.|+.|+|+|||+||+|+||.||+|||+. .++|.++.+||+|++...++.
T Consensus 555 v~elie~ad--gfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSv 631 (942)
T KOG0205|consen 555 VDELIEKAD--GFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 631 (942)
T ss_pred HHHHhhhcc--CccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchh
Confidence 444454444 68999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHHhcccC
Q psy3624 745 IVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAISLAYEK 813 (1010)
Q Consensus 745 i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~l~~~~ 813 (1010)
+..++..+|.+|++++.+..|.++..+-.++.+++..+. ...-++|...+++-++.|. +.++.+.|+
T Consensus 632 iI~avltSraIfqrmknytiyavsitiriv~gfml~alI-w~~df~pfmvliiailnd~-t~mtis~d~ 698 (942)
T KOG0205|consen 632 IISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALI-WEFDFSPFMVLIIAILNDG-TIMTISKDR 698 (942)
T ss_pred hHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHhcCC-ceEEEEccc
Confidence 999999999999999999999998887765443332222 2334556666666666664 344555554
No 19
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.9e-88 Score=793.01 Aligned_cols=555 Identities=21% Similarity=0.320 Sum_probs=448.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHHH----HHHHHHHHHHhhhccCC-ce
Q psy3624 84 HLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQ----EAKSARIMDSFKNMVPQ-YA 158 (1010)
Q Consensus 84 ~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~----~~k~~~~~~~l~~~~~~-~~ 158 (1010)
++++|+.++++++++++++............| ..++.+.++++++++.+++.++ |+|+++++++|+++.++ ++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~--~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFHQESV--SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 56789999999999999876543221111111 2234555555555565555555 78999999999999886 67
Q ss_pred E-EEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeee
Q psy3624 159 N-VIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTN 237 (1010)
Q Consensus 159 ~-V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~ 237 (1010)
+ |.|||++++|++++|+|||+|.+++||+|||||++++|.. .||||+|||||.|+.|.++. +.++ +|+||.
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~------d~~~-V~aGT~ 178 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGG------DFDN-VIGGTS 178 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCC------ccCe-eecCce
Confidence 6 7799999999999999999999999999999999999976 99999999999999999872 1223 999999
Q ss_pred eeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q psy3624 238 AVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGII 317 (1010)
Q Consensus 238 v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 317 (1010)
+.+|+++++|+++|.+|++|++.++++.++.+++|++.....+...+..+.+.+++ ++..+.....+...+.+.++++
T Consensus 179 v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~~--~~~~~~~~~~~~~~~~~~val~ 256 (673)
T PRK14010 179 VASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVIL--TMYPLAKFLNFNLSIAMLIALA 256 (673)
T ss_pred eecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHHH--HHHHHHhhccHHHHHHHHHHHH
Confidence 99999999999999999999999999999989999997766654443332222111 1111111113444667788888
Q ss_pred eeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCC
Q psy3624 318 VANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTG 397 (1010)
Q Consensus 318 ~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 397 (1010)
+++|||+|+..++++.+.++.+|+|+|+++|+++++|++|++|++|||||||||+|++.+.++....
T Consensus 257 V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~------------- 323 (673)
T PRK14010 257 VCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK------------- 323 (673)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-------------
Confidence 8899999999999999999999999999999999999999999999999999999887776643210
Q ss_pred chhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCc
Q psy3624 398 LIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDK 477 (1010)
Q Consensus 398 ~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k 477 (1010)
....++++..+++|+... .+|.+.|++++++..+.+... .....+||++++|
T Consensus 324 -------~~~~~~ll~~a~~~~~~s----------------~~P~~~AIv~~a~~~~~~~~~-----~~~~~~pF~~~~k 375 (673)
T PRK14010 324 -------SSSFERLVKAAYESSIAD----------------DTPEGRSIVKLAYKQHIDLPQ-----EVGEYIPFTAETR 375 (673)
T ss_pred -------CccHHHHHHHHHHhcCCC----------------CChHHHHHHHHHHHcCCCchh-----hhcceeccccccc
Confidence 011233566666776432 278899999988765433211 1123579999999
Q ss_pred eEEEEEEeCCCeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCc
Q psy3624 478 YQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFE 557 (1010)
Q Consensus 478 ~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~ 557 (1010)
+|.+.+. ++ .+.||++|.++++|+. ++...+ ..+++..++++++|+|+++++
T Consensus 376 ~~gv~~~---g~--~i~kGa~~~il~~~~~---~g~~~~------~~~~~~~~~~a~~G~~~l~v~-------------- 427 (673)
T PRK14010 376 MSGVKFT---TR--EVYKGAPNSMVKRVKE---AGGHIP------VDLDALVKGVSKKGGTPLVVL-------------- 427 (673)
T ss_pred eeEEEEC---CE--EEEECCHHHHHHHhhh---cCCCCc------hHHHHHHHHHHhCCCeEEEEE--------------
Confidence 8877542 32 4559999999999974 122211 125566778899999999875
Q ss_pred CCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCC
Q psy3624 558 LKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRV 637 (1010)
Q Consensus 558 ~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~ 637 (1010)
.|++++|+++++|++||+++++|++||++||+++|+|||++.||.++|+++|+..
T Consensus 428 ----------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~--------------- 482 (673)
T PRK14010 428 ----------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR--------------- 482 (673)
T ss_pred ----------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce---------------
Confidence 2568999999999999999999999999999999999999999999999999953
Q ss_pred ccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc
Q psy3624 638 PVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI 717 (1010)
Q Consensus 638 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v 717 (1010)
+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||
T Consensus 483 --------------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADV 524 (673)
T PRK14010 483 --------------------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANV 524 (673)
T ss_pred --------------------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCE
Confidence 899999999999999999999999999999999999999999
Q ss_pred eEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHh
Q psy3624 718 GIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVI 783 (1010)
Q Consensus 718 gIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~ 783 (1010)
||||| +|+|.+|++||+|++++|+..|.+++++||++|.|+++++.|.++.|+..++..+...+.
T Consensus 525 GIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 525 GLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred EEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 99999 999999999999999999999999999999999999999999999999998876655444
No 20
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5e-86 Score=773.47 Aligned_cols=549 Identities=23% Similarity=0.326 Sum_probs=451.5
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhcc-ccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCC-ceEEE
Q psy3624 84 HLFEGFSVLLWTGAVLCFIAYLIEFHI-SEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQ-YANVI 161 (1010)
Q Consensus 84 ~l~~~f~~~l~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~-~~~V~ 161 (1010)
++.+|+.++++++++++++........ ....+...+..++++++.+++..+++.++|+|+++.+++|+++.++ +++|+
T Consensus 30 ~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vi 109 (679)
T PRK01122 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKL 109 (679)
T ss_pred HhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 677899999999999998775433211 1112223445556666667777888999999999999999998885 69999
Q ss_pred eCCe-EEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeee
Q psy3624 162 RDGQ-KKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVE 240 (1010)
Q Consensus 162 R~g~-~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~ 240 (1010)
|||+ +++|++++|+|||+|.+++||+|||||++++|. ..||||+|||||.|+.|.+++. ..| +|+||.+.+
T Consensus 110 r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~------~~~-V~aGT~v~~ 181 (679)
T PRK01122 110 REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGD------FSS-VTGGTRVLS 181 (679)
T ss_pred ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCc------cCe-EEeceEEEe
Confidence 9988 899999999999999999999999999999997 4999999999999999998753 123 899999999
Q ss_pred eeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheee
Q psy3624 241 GTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVAN 320 (1010)
Q Consensus 241 g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 320 (1010)
|+++++|+++|.+|.+|++.++++.++.+++|++...+.+...+..+.+++++.++.+.++.+..+ .+.+++++++++
T Consensus 182 G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~--~l~~~iallV~a 259 (679)
T PRK01122 182 DWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGAL--SITVLVALLVCL 259 (679)
T ss_pred eeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHc
Confidence 999999999999999999999999998899999988887766655444443333333222223333 788889999999
Q ss_pred ccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchh
Q psy3624 321 VPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIE 400 (1010)
Q Consensus 321 iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 400 (1010)
|||+|+..++.+...++.+|+|+|+++|++.++|+||++|++|||||||||+|+|++++++..+.
T Consensus 260 iP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~--------------- 324 (679)
T PRK01122 260 IPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG--------------- 324 (679)
T ss_pred ccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999998753211
Q ss_pred hhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHh-cCChHHHhhhcceeEeecCCCCCceE
Q psy3624 401 KVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELA-IGDVVEFRNRHKKALEIPFNSTDKYQ 479 (1010)
Q Consensus 401 ~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~-~~~~~~~~~~~~~~~~~~f~s~~k~~ 479 (1010)
...+.++..+++|+.... +|...|++++++.. +.+ ..+.+++....+||++.++++
T Consensus 325 -----~~~~~ll~~a~~~s~~s~----------------hP~~~AIv~~a~~~~~~~--~~~~~~~~~~~~pF~s~~~~~ 381 (679)
T PRK01122 325 -----VTEEELADAAQLSSLADE----------------TPEGRSIVVLAKQRFNLR--ERDLQSLHATFVPFSAQTRMS 381 (679)
T ss_pred -----CCHHHHHHHHHHhcCCCC----------------CchHHHHHHHHHhhcCCC--chhhccccceeEeecCcCceE
Confidence 011345666677765431 24457888887652 211 111124556788999998877
Q ss_pred EEEEEeCCCeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCC
Q psy3624 480 VSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELK 559 (1010)
Q Consensus 480 ~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~ 559 (1010)
.+.+ ++ ..++||++|.+++.|.. .+.. .++++++..++++++|.|++++|+
T Consensus 382 gv~~---~g--~~~~kGa~e~il~~~~~---~g~~------~~~~~~~~~~~~a~~G~~~l~va~--------------- 432 (679)
T PRK01122 382 GVDL---DG--REIRKGAVDAIRRYVES---NGGH------FPAELDAAVDEVARKGGTPLVVAE--------------- 432 (679)
T ss_pred EEEE---CC--EEEEECCHHHHHHHHHh---cCCc------ChHHHHHHHHHHHhCCCcEEEEEE---------------
Confidence 6543 23 47899999999999963 1211 134577788899999999999983
Q ss_pred CCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCcc
Q psy3624 560 SDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPV 639 (1010)
Q Consensus 560 ~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~ 639 (1010)
|++++|+++++|++||+++++|++||++||+++|+|||++.||.++|+++|+++
T Consensus 433 ---------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------- 486 (679)
T PRK01122 433 ---------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------- 486 (679)
T ss_pred ---------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------
Confidence 467999999999999999999999999999999999999999999999999953
Q ss_pred ccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE
Q psy3624 640 SSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI 719 (1010)
Q Consensus 640 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 719 (1010)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||
T Consensus 487 ------------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGI 530 (679)
T PRK01122 487 ------------------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 530 (679)
T ss_pred ------------------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 89999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHH
Q psy3624 720 AMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVP 772 (1010)
Q Consensus 720 amg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 772 (1010)
||| +|+|.+|++||+|++++|+..+.+++++||++.-+--....|++.-.++
T Consensus 531 AMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~ 582 (679)
T PRK01122 531 AMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVA 582 (679)
T ss_pred EeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHH
Confidence 999 9999999999999999999999999999999986555556677764443
No 21
>KOG0206|consensus
Probab=100.00 E-value=1.3e-86 Score=794.26 Aligned_cols=776 Identities=20% Similarity=0.227 Sum_probs=601.0
Q ss_pred HhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHHH
Q psy3624 60 FLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQ 139 (1010)
Q Consensus 60 r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~ 139 (1010)
+..+|-.|.+..+ +|+++.|+|++++++|.+..++++++..+...|+ .+ .+..+...+++++++.++++.+.++
T Consensus 28 ~~~~~~~N~i~Tt-KYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~----~~~~~~~~~pl~~vl~~t~iKd~~e 101 (1151)
T KOG0206|consen 28 PQRKYCDNRISTT-KYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS----PFNPYTTLVPLLFVLGITAIKDAIE 101 (1151)
T ss_pred hhccccCCeeEEE-eccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc----ccCccceeeceeeeehHHHHHHHHh
Confidence 4448888999875 5999999999999999999999998888888776 32 2356677889999999999999999
Q ss_pred HHHHHHHHHHhhhccCCceEEEeCCe-EEEEeCCCccCCcEEEecCCCeecccEEEEEeCc----eEEEeecccCCCccc
Q psy3624 140 EAKSARIMDSFKNMVPQYANVIRDGQ-KKTILSSELVRGDVVDVKFGDRIPADIRIIESHG----FKVDNSSLTGEAEPQ 214 (1010)
Q Consensus 140 ~~k~~~~~~~l~~~~~~~~~V~R~g~-~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~----l~Vdes~LTGEs~pv 214 (1010)
++|+.+...++++ .+++|.|++. +++..|++|++||+|++..++.+|||.++++++. |+|++++|+||++.+
T Consensus 102 D~rR~~~D~~iN~---~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK 178 (1151)
T KOG0206|consen 102 DYRRHKQDKEVNN---RKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLK 178 (1151)
T ss_pred hhhhhhccHHhhc---ceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccc
Confidence 9999998888776 5689999644 8999999999999999999999999999998765 899999999999999
Q ss_pred cccCCCcc------------------------------------cc-cccccceeeeeeeeeee-eEeEEEEEcCCcCch
Q psy3624 215 ARNASEST------------------------------------TI-VLEAKNLAFFSTNAVEG-TAKGIVILCGDNTVM 256 (1010)
Q Consensus 215 ~K~~~~~~------------------------------------~~-~~~~~n~~~~Gt~v~~g-~~~~~V~~tG~~T~~ 256 (1010)
.|+..... .. ++..+|++..|+.+.+. .++|+|+.||++|++
T Consensus 179 ~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~ 258 (1151)
T KOG0206|consen 179 VKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKL 258 (1151)
T ss_pred eeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchH
Confidence 88763211 11 66778899999999874 589999999999977
Q ss_pred hhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------------------hHHHHHHHHHHhh
Q psy3624 257 GRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGY-------------------AWIDAVIFLIGII 317 (1010)
Q Consensus 257 g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~i~~l 317 (1010)
++... .++.+++++++.++.....+..+.++++++..+...+... .....++.++.++
T Consensus 259 ~~n~~---~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~ 335 (1151)
T KOG0206|consen 259 MQNSG---KPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILY 335 (1151)
T ss_pred HHhcC---CCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhh
Confidence 66544 4778899999999988877766666555544433221110 1123445566777
Q ss_pred eeeccCcchHHHHHHHHHHHHHh----------hcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeee
Q psy3624 318 VANVPEGLLATVTVCLSLTAKRM----------ASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVF 387 (1010)
Q Consensus 318 ~~~iP~~L~~~~~~~~~~~~~~l----------~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 387 (1010)
...+|.+|.+.+.+....++..+ .+..+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+++..|
T Consensus 336 ~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~y 415 (1151)
T KOG0206|consen 336 QYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSY 415 (1151)
T ss_pred hceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCccc
Confidence 88899999999999999888654 24678999999999999999999999999999999999999999887
Q ss_pred eecccCCC----------------CCchhh-----------hcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCC
Q psy3624 388 EVDYFKDP----------------TGLIEK-----------VRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGD 440 (1010)
Q Consensus 388 ~~~~~~~~----------------~~~~~~-----------~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~ 440 (1010)
.....+.. .+.... ....+....+..++++||+...+...+.. .-.+...+
T Consensus 416 g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~--~~~Y~A~S 493 (1151)
T KOG0206|consen 416 GRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSG--KLSYEAES 493 (1151)
T ss_pred ccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCcc--ceeeecCC
Confidence 65432210 000000 01344556788999999998876632211 12345568
Q ss_pred hhHHHHHHHHHHhcCCh------------HHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhcccc
Q psy3624 441 ASEAAILKFSELAIGDV------------VEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTM 508 (1010)
Q Consensus 441 ~~e~all~~~~~~~~~~------------~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~ 508 (1010)
|+|.|+++.++..|... ......++.++.++|+|.||||+++++.++++.++|||||+..|++++..
T Consensus 494 PDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~- 572 (1151)
T KOG0206|consen 494 PDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK- 572 (1151)
T ss_pred CcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh-
Confidence 99999999998766421 11234688899999999999999999999999999999999999999975
Q ss_pred ccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCC--------------CCCCCCCCCCcEEEE
Q psy3624 509 KQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELK--------------SDPPNFPLTGLRFLG 574 (1010)
Q Consensus 509 ~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~--------------~~~~~~~e~~l~~lG 574 (1010)
-....+++-.+.+++++.+|+|+||+|||.+++++|..|.+.. .+..+.+|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 1344566777889999999999999999999998876553211 011244789999999
Q ss_pred EEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHH--------------------HHhh
Q psy3624 575 LMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLED--------------------IAKR 634 (1010)
Q Consensus 575 ~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~--------------------~~~~ 634 (1010)
.+++||+++++++++|+.|++||||+||+|||+.+||.+++..|++..++...+.- +...
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998865431110 0000
Q ss_pred cC--CccccCCCC-CcceeEEechhhhcCCHH----HHHHHHhccCcEEEEecChhhHHHHHHHHHH-cCCeEEEEcCCc
Q psy3624 635 RR--VPVSSLDPR-ESTTIVIQGSILRDMTTE----QLENVLRTHREIVFARTSPTQKLHIVEGCQR-LGAIVAVTGDGV 706 (1010)
Q Consensus 635 ~~--~~~~~~~~~-~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~-~g~~v~~iGDg~ 706 (1010)
.. ......+.. +..+++++|..+...... .+-.+...|+.++|||++|.||+.+|+..++ .+.++++||||+
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 00 000001111 367899999988765543 4556778999999999999999999999975 588999999999
Q ss_pred cCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhcc-
Q psy3624 707 NDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGI- 785 (1010)
Q Consensus 707 ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~- 785 (1010)
||++|++.|||||.++..+...|..+||+-+....+-.-. ++-|||+.|.|+.+++.|.+++|+...+..+.+.++..
T Consensus 805 NDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gf 883 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGF 883 (1151)
T ss_pred ccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 9999999999999665444445777899999876654433 33499999999999999999999999999888887753
Q ss_pred --CchhHHHHHHHHHHhhchHHHHHh-cccC-CCcccccCCCCCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3624 786 --PLPLGVVAILCIDLGTDMWPAISL-AYEK-AESDIMRRHPRNPV---TDKLVTGKLLFVAYGQIGVIEACAGFFSYFV 858 (1010)
Q Consensus 786 --~~pl~~~~il~~~l~~~~l~~~~l-~~~~-~~~~~m~~~p~~~~---~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~ 858 (1010)
......+++.++|++++.+|.+.+ .+|+ .+.+.+.+.|...+ ...+++.+.+. .+...|+++++++|+..+.
T Consensus 884 Sgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~-~~~~~g~~~sli~Ff~~~~ 962 (1151)
T KOG0206|consen 884 SGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFW-GWMLDGFYQSLVIFFLPYL 962 (1151)
T ss_pred CCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHH-HHHHHHHHhheeeeeeeHh
Confidence 345677889999999999999999 5554 44444446664322 22344444443 3445788888888766554
Q ss_pred HH
Q psy3624 859 IM 860 (1010)
Q Consensus 859 ~~ 860 (1010)
++
T Consensus 963 ~~ 964 (1151)
T KOG0206|consen 963 VF 964 (1151)
T ss_pred hh
Confidence 44
No 22
>KOG0210|consensus
Probab=100.00 E-value=1.8e-85 Score=713.08 Aligned_cols=866 Identities=20% Similarity=0.240 Sum_probs=620.0
Q ss_pred HHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHH
Q psy3624 59 QFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYS 138 (1010)
Q Consensus 59 ~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~ 138 (1010)
.++++|.+|.+... +|.++.|++.-++++|..++++++++..+.++++..-.... ..+|.+...++.+.++...++.+
T Consensus 74 ~~~~r~~pn~v~nq-Kyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l-~ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQ-KYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYL-STYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhc-ccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecch-hhhhHHHHHHHHHHHHHHHHHHH
Confidence 56778999999875 58899999999999999999999988888887765432111 12333344445555556666666
Q ss_pred HHHHHHHHHHHhhhccCCceEE-EeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCc----eEEEeecccCCCcc
Q psy3624 139 QEAKSARIMDSFKNMVPQYANV-IRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHG----FKVDNSSLTGEAEP 213 (1010)
Q Consensus 139 ~~~k~~~~~~~l~~~~~~~~~V-~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~----l~Vdes~LTGEs~p 213 (1010)
+++++++..++ +..++ -|+|...+ +++++++||+|.++.+++||||+++|++++ ++|.+..|+||++.
T Consensus 152 ~r~~rd~~~Ns------e~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDW 224 (1051)
T KOG0210|consen 152 KRRRRDRELNS------EKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDW 224 (1051)
T ss_pred HHHHhhhhhhh------hhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccc
Confidence 66666554432 23344 47776555 999999999999999999999999998653 78999999999998
Q ss_pred ccccCCCcc-------------------------------------cccccccceeeeeeeeeeeeEeEEEEEcCCcCch
Q psy3624 214 QARNASEST-------------------------------------TIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVM 256 (1010)
Q Consensus 214 v~K~~~~~~-------------------------------------~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~ 256 (1010)
+.|-|-+.. ..++..+|.++++|.+.+|.++|+|+|||.+|+.
T Consensus 225 KLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs 304 (1051)
T KOG0210|consen 225 KLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS 304 (1051)
T ss_pred eeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH
Confidence 777553110 1256778999999999999999999999999954
Q ss_pred hhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHH
Q psy3624 257 GRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLT 336 (1010)
Q Consensus 257 g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~ 336 (1010)
....+.++.+-.-++.++|.+.+++....+.+++++..... .+..|...++.++.++...+|.+|-+.+.++....
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g-~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~y 380 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG-FGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVY 380 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc-CCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhH
Confidence 44556677777788889999999988877777666544332 34678889999999999999999999999999999
Q ss_pred HHHhhc----ccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCC---------------CCC
Q psy3624 337 AKRMAS----KNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKD---------------PTG 397 (1010)
Q Consensus 337 ~~~l~~----~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~---------------~~~ 397 (1010)
.+.+.+ .|.++|+.+.-|+||++.++.+|||||||+|+|.+++++.+--.|..+..++ ..+
T Consensus 381 s~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~ 460 (1051)
T KOG0210|consen 381 SWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKG 460 (1051)
T ss_pred hhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccc
Confidence 988876 4678999999999999999999999999999999999998766654332110 000
Q ss_pred chh--hhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCCh-------------HHHhh
Q psy3624 398 LIE--KVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDV-------------VEFRN 462 (1010)
Q Consensus 398 ~~~--~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~-------------~~~~~ 462 (1010)
... .........++.+++++||+..+..++++ ...+...+|+|.|++++.+..|... .....
T Consensus 461 ~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~g---e~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~ 537 (1051)
T KOG0210|consen 461 ALSRVKKDMSARVRNAVLALALCHNVTPVFEDDG---EVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDEL 537 (1051)
T ss_pred cchhhcCcccHHHHHHHHHHHHhccCCcccCCCc---eEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcce
Confidence 000 01123345678899999999887655432 2245567999999999887554311 11123
Q ss_pred hcceeEeecCCCCCceEEEEEEeC-CCeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEE
Q psy3624 463 RHKKALEIPFNSTDKYQVSIHIMP-NNEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLG 541 (1010)
Q Consensus 463 ~~~~~~~~~f~s~~k~~~~v~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~ 541 (1010)
.|+++..+||+|+.|||..+++.+ .+++..|.|||+-.|....+. .+++++...+||++|+|+|.
T Consensus 538 ~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~--------------NdWleEE~gNMAREGLRtLV 603 (1051)
T KOG0210|consen 538 NYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY--------------NDWLEEECGNMAREGLRTLV 603 (1051)
T ss_pred eEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc--------------chhhhhhhhhhhhhcceEEE
Confidence 578899999999999999988875 789999999999888765432 46788999999999999999
Q ss_pred EeeeccCCCCCCCCCc--------CCCCC-------CCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCC
Q psy3624 542 FCDYALPPAKFPAGFE--------LKSDP-------PNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGD 606 (1010)
Q Consensus 542 ~a~~~l~~~~~~~~~~--------~~~~~-------~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd 606 (1010)
+|.|.++++++....+ ..+.+ ...+|+||.++|++|.||+++++++.+++.||+|||++||+|||
T Consensus 604 vakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGD 683 (1051)
T KOG0210|consen 604 VAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGD 683 (1051)
T ss_pred EEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCc
Confidence 9999999876543211 11100 12468999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCccc--HHHHHhhcC--CccccCCCCCcceeEEechhhhcCC---HHHHHHHHhccCcEEEEe
Q psy3624 607 HPVTAKAIAKAVGIISEGSET--LEDIAKRRR--VPVSSLDPRESTTIVIQGSILRDMT---TEQLENVLRTHREIVFAR 679 (1010)
Q Consensus 607 ~~~ta~~ia~~~gi~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~v~~r 679 (1010)
+.+||..+|+..++...+... +.+.....+ ........+...+++++|+.++... ++++.++..+++.+++||
T Consensus 684 KlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CR 763 (1051)
T KOG0210|consen 684 KLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCR 763 (1051)
T ss_pred chhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEe
Confidence 999999999999998754311 111111111 1112233445678899999887554 467778888999999999
Q ss_pred cChhhHHHHHHHHHHc-CCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHH-HHhhhhHH
Q psy3624 680 TSPTQKLHIVEGCQRL-GAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGV-EEGRLIFD 757 (1010)
Q Consensus 680 ~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i-~~gR~~~~ 757 (1010)
|+|+||+++++.+|++ |..|+|+|||.||++|+++||+||..-.+....|.-|||+.+. .|..+.+++ -|||..|+
T Consensus 764 ctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYk 841 (1051)
T KOG0210|consen 764 CTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYK 841 (1051)
T ss_pred cChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHH
Confidence 9999999999999884 8999999999999999999999996533444556778999997 467777755 58999999
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHhccCchhHH---HHHHHHHHhhchHHHHHhcccC-CCcccccCCCCCCC---CCC
Q psy3624 758 NLKKSIAYTLASNVPEITPFLMFIVIGIPLPLGV---VAILCIDLGTDMWPAISLAYEK-AESDIMRRHPRNPV---TDK 830 (1010)
Q Consensus 758 ~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~---~~il~~~l~~~~l~~~~l~~~~-~~~~~m~~~p~~~~---~~~ 830 (1010)
|-.+.-+|.+-..+.....+.++.....+.|.+- +.+..+..+.+++|.+++..|+ .++.+....|.-.+ ..+
T Consensus 842 rsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr 921 (1051)
T KOG0210|consen 842 RSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGR 921 (1051)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCC
Confidence 9999999988776665555554433333333333 3466778888899999999986 44455445552111 233
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHH
Q psy3624 831 LVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFF 910 (1010)
Q Consensus 831 l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f 910 (1010)
.++.+.|+ +|..++++++.+.+..+++++.. -|. ..-++.|
T Consensus 922 ~lSYKtF~-iwvLISiYQG~vim~g~~~l~~~-ef~-------------------------------------~ivaisF 962 (1051)
T KOG0210|consen 922 SLSYKTFF-IWVLISIYQGSVIMYGALLLFDT-EFI-------------------------------------HIVAISF 962 (1051)
T ss_pred ccchhhhh-hhhhHHHHcccHHHHHHHHHhhh-hhe-------------------------------------Eeeeeee
Confidence 44434333 34446778877666554443310 000 1224455
Q ss_pred HHHHHHHHHHHHHhhccCccccccCccChhHHHHHHHHHHHHHHHhccccccccccccccC-chhHHHHHHHHHHHHHHH
Q psy3624 911 IAIVVVQWADLLICKTRYNSLVHQGMNNWVLNFGIVFETVAACIVSYCPGMDEILKTYPVR-AEWWLPAVPFAIVIFIYD 989 (1010)
Q Consensus 911 ~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip~l~~~f~~~~l~-~~~wl~~l~~~~~~l~~~ 989 (1010)
..+++..+.-.....++ | +|.++.+-++++.+- +.++|.++.+|...-+. +.+.+-..++.++.++..
T Consensus 963 taLi~tELiMVaLtv~t----w-----~~~m~vae~lsL~~Y--ivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl 1031 (1051)
T KOG0210|consen 963 TALILTELIMVALTVRT----W-----HWLMVVAELLSLALY--IVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPL 1031 (1051)
T ss_pred HHHHHHHHHHHhhhhhh----h-----hHHHHHHHHHHHHHH--HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555544333221111 1 344444444444443 34456677766655443 333333445556666677
Q ss_pred HHHHHHHhhCCCCcccc
Q psy3624 990 ECRRFWLRTHPNGWVER 1006 (1010)
Q Consensus 990 e~~K~~~r~~~~~~~~~ 1006 (1010)
-..|+++|++.-..+.|
T Consensus 1032 ~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 1032 YFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred HHHHHHHhhcCCcchhh
Confidence 78899998876544444
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.4e-81 Score=733.91 Aligned_cols=555 Identities=23% Similarity=0.323 Sum_probs=450.2
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhcccc--c--cccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCC-ce
Q psy3624 84 HLFEGFSVLLWTGAVLCFIAYLIEFHISE--D--ASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQ-YA 158 (1010)
Q Consensus 84 ~l~~~f~~~l~~~~~~~~~~~~i~~~~~~--~--~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~-~~ 158 (1010)
++.+|+.++++++++++++....+..... . .|+ .+...+++++.+++..+++.++|+|+++..++|+++.++ .+
T Consensus 29 ~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~-~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 29 QWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALF-NAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HhhChHHHHHHHHHHHHHHHHHhhhccccccccccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 56788899999999999877543211111 0 122 112233344456667778889999999999999998877 48
Q ss_pred EEEe-CCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeee
Q psy3624 159 NVIR-DGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTN 237 (1010)
Q Consensus 159 ~V~R-~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~ 237 (1010)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ ..||||+|||||.|+.|.+++.. +.+|+||.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~-------~~V~aGT~ 179 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDF-------ASVTGGTR 179 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCc-------ceeecCcE
Confidence 8886 899999999999999999999999999999999996 59999999999999999988631 12899999
Q ss_pred eeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q psy3624 238 AVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGII 317 (1010)
Q Consensus 238 v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 317 (1010)
+.+|++.++|+++|.+|.+|++.++++.++.+++|+|...+.+...+..+.+++++.++.+..+.+ ....+..+++++
T Consensus 180 v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~~--~~~~~~~lvall 257 (675)
T TIGR01497 180 ILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGG--NAISVTVLVALL 257 (675)
T ss_pred EEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--hhHHHHHHHHHH
Confidence 999999999999999999999999999988889999988877766554443333222222111111 123567789999
Q ss_pred eeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCC
Q psy3624 318 VANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTG 397 (1010)
Q Consensus 318 ~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 397 (1010)
+++|||+|+...+.+...++.+|+++|+++|++.++|++|++|++|||||||||+|+|++++++..+.
T Consensus 258 V~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~------------ 325 (675)
T TIGR01497 258 VCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG------------ 325 (675)
T ss_pred HHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC------------
Confidence 99999988877777777899999999999999999999999999999999999999999998764211
Q ss_pred chhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCc
Q psy3624 398 LIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDK 477 (1010)
Q Consensus 398 ~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k 477 (1010)
.+.+.++..+++|+... .+|.+.|++++++..+.+... ..++.....||++.++
T Consensus 326 --------~~~~~ll~~aa~~~~~s----------------~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~pf~~~~~ 379 (675)
T TIGR01497 326 --------VDEKTLADAAQLASLAD----------------DTPEGKSIVILAKQLGIREDD--VQSLHATFVEFTAQTR 379 (675)
T ss_pred --------CcHHHHHHHHHHhcCCC----------------CCcHHHHHHHHHHHcCCCccc--cccccceEEEEcCCCc
Confidence 01234566666665432 146677898888764432211 1233456789999987
Q ss_pred eEEEEEEeCCCeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCc
Q psy3624 478 YQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFE 557 (1010)
Q Consensus 478 ~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~ 557 (1010)
++.+.+. ++ ..+.||++|.+++.|.. ++.. ...++++.+++++++|.|++++|+
T Consensus 380 ~sg~~~~--~g--~~~~kGa~e~i~~~~~~---~g~~------~~~~~~~~~~~~a~~G~r~l~va~------------- 433 (675)
T TIGR01497 380 MSGINLD--NG--RMIRKGAVDAIKRHVEA---NGGH------IPTDLDQAVDQVARQGGTPLVVCE------------- 433 (675)
T ss_pred EEEEEEe--CC--eEEEECCHHHHHHHHHh---cCCC------CcHHHHHHHHHHHhCCCeEEEEEE-------------
Confidence 7665432 33 46899999999998852 1221 123567778899999999999984
Q ss_pred CCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCC
Q psy3624 558 LKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRV 637 (1010)
Q Consensus 558 ~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~ 637 (1010)
+.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++|+++
T Consensus 434 -----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~--------------- 487 (675)
T TIGR01497 434 -----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD--------------- 487 (675)
T ss_pred -----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE---------------
Confidence 247999999999999999999999999999999999999999999999999953
Q ss_pred ccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc
Q psy3624 638 PVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI 717 (1010)
Q Consensus 638 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v 717 (1010)
+++|++|++|.++++.+|++|+.|+|+|||.||+|||++||+
T Consensus 488 --------------------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~Adv 529 (675)
T TIGR01497 488 --------------------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADV 529 (675)
T ss_pred --------------------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCE
Confidence 899999999999999999999999999999999999999999
Q ss_pred eEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHH
Q psy3624 718 GIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFL 778 (1010)
Q Consensus 718 gIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~ 778 (1010)
||||| +|++.++++||+++.++|+..+.+++++||+++-+......|+++.++.-.+.++
T Consensus 530 GiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~ 589 (675)
T TIGR01497 530 GVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAII 589 (675)
T ss_pred eEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHH
Confidence 99999 9999999999999999999999999999999999999999999998887655444
No 24
>KOG0209|consensus
Probab=100.00 E-value=1.4e-77 Score=663.52 Aligned_cols=871 Identities=20% Similarity=0.258 Sum_probs=571.5
Q ss_pred cCCCHHHHHHHhCCCccCCCCHH-HHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccc
Q psy3624 33 HKLPLKDLCARYQTSAEKGLTSA-QAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHIS 111 (1010)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~GLs~~-e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~ 111 (1010)
...+.++....++.+ +|+..+ |+..-.++||.|..+-+. .++-++|.+....||.....++.. .|+..
T Consensus 146 ~~fp~~~~~g~~~k~--~G~~~~~~i~~a~~~~G~N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvg----LWCLD---- 214 (1160)
T KOG0209|consen 146 LTFPTDEPFGYFQKS--TGHEEESEIKLAKHKYGKNKFDIVV-PTFSELFKEHAVAPFFVFQVFCVG----LWCLD---- 214 (1160)
T ss_pred cccCcCCcchhhhhc--cCcchHHHHHHHHHHhcCCccccCC-ccHHHHHHHhccCceeeHhHHhHH----HHHhH----
Confidence 345666666666664 677643 444445569999998754 457777777766665544433322 22321
Q ss_pred cccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhc--cCCceEEEeCCeEEEEeCCCccCCcEEEecC---CC
Q psy3624 112 EDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNM--VPQYANVIRDGQKKTILSSELVRGDVVDVKF---GD 186 (1010)
Q Consensus 112 ~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~--~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~---G~ 186 (1010)
++||..+.-+++++.-..--.+|+. +.+.++++| .|..+.|+|+++|+.+.++||+|||+|.+.. ..
T Consensus 215 -----eyWYySlFtLfMli~fE~tlV~Qrm---~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~ 286 (1160)
T KOG0209|consen 215 -----EYWYYSLFTLFMLIAFEATLVKQRM---RTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDS 286 (1160)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccC
Confidence 4555555444443333222334444 445555555 3567899999999999999999999999977 56
Q ss_pred eecccEEEEEeCceEEEeecccCCCccccccCCCccc--ccc-----cccceeeeeeeee-------------eeeEeEE
Q psy3624 187 RIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTT--IVL-----EAKNLAFFSTNAV-------------EGTAKGI 246 (1010)
Q Consensus 187 ~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~--~~~-----~~~n~~~~Gt~v~-------------~g~~~~~ 246 (1010)
.||||.++++|++ .|||++|||||.|..|.+..... ..+ +...++|.||.++ +|.+.+.
T Consensus 287 ~vPCDllLL~Gsc-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~ 365 (1160)
T KOG0209|consen 287 HVPCDLLLLRGSC-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAY 365 (1160)
T ss_pred cCCceEEEEecce-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEE
Confidence 7999999999985 79999999999999998764321 111 2346889999987 4679999
Q ss_pred EEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhh-hhHHHHHHHHHHhheeecc
Q psy3624 247 VILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSF---ALG-YAWIDAVIFLIGIIVANVP 322 (1010)
Q Consensus 247 V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~i~~l~~~iP 322 (1010)
|++||.+|..|++.+.+-....+-|.-. .+.+..+++.+.+.++.. +.+|. -.+ .+-...++-++-++...+|
T Consensus 366 VlrTGFeTSQGkLvRtilf~aervTaNn--~Etf~FILFLlVFAiaAa-~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvP 442 (1160)
T KOG0209|consen 366 VLRTGFETSQGKLVRTILFSAERVTANN--RETFIFILFLLVFAIAAA-GYVWVEGSKDPTRSRYKLFLECTLILTSVVP 442 (1160)
T ss_pred EEeccccccCCceeeeEEecceeeeecc--HHHHHHHHHHHHHHHHhh-heEEEecccCcchhhhheeeeeeEEEeccCC
Confidence 9999999999999886655433333322 222322222211111110 11110 001 2334556677778888999
Q ss_pred CcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhh
Q psy3624 323 EGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKV 402 (1010)
Q Consensus 323 ~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (1010)
+.||+-++++...+...|+|.++.|..+-++.-+|+||+.|||||||||+..|.|.++--... +.+.....
T Consensus 443 pELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~---------~~~~~~~~ 513 (1160)
T KOG0209|consen 443 PELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSA---------DEGALTPA 513 (1160)
T ss_pred CCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccC---------Ccccccch
Confidence 999999999999999999999999999999999999999999999999999999998754211 00000100
Q ss_pred cCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCCh--HHHhh----hcceeEeecCCCCC
Q psy3624 403 RNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDV--VEFRN----RHKKALEIPFNSTD 476 (1010)
Q Consensus 403 ~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~--~~~~~----~~~~~~~~~f~s~~ 476 (1010)
.+.+ ..-..+++.||.... .+....|||.|.|.++...+..... ...++ ..++..++.|+|.-
T Consensus 514 s~~p--~~t~~vlAscHsLv~---------le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaL 582 (1160)
T KOG0209|consen 514 SKAP--NETVLVLASCHSLVL---------LEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSAL 582 (1160)
T ss_pred hhCC--chHHHHHHHHHHHHH---------hcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHH
Confidence 0011 124567778886532 2235789999999999876543211 11121 24556789999999
Q ss_pred ceEEEEEEeC----CCeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCC
Q psy3624 477 KYQVSIHIMP----NNEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKF 552 (1010)
Q Consensus 477 k~~~~v~~~~----~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~ 552 (1010)
|||+++.... +-++++.+|||||.|.++... ....+++.+.+++++|.||||++||.++.-..
T Consensus 583 KRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d-------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~ 649 (1160)
T KOG0209|consen 583 KRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD-------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMV 649 (1160)
T ss_pred HHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh-------------CchhHHHHHHHHhhccceEEEEecccccccch
Confidence 9999887653 247899999999999987653 34568888999999999999999999974322
Q ss_pred CCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHH--
Q psy3624 553 PAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLED-- 630 (1010)
Q Consensus 553 ~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~-- 630 (1010)
.+..+ -+++.+|+||+|.|++.|..|+++|++++|++|++.+++++|+||||+.||.++|+++|+.......+..
T Consensus 650 ~q~rd---~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~ 726 (1160)
T KOG0209|consen 650 SQVRD---LKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPE 726 (1160)
T ss_pred hhhhh---hhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCc
Confidence 11122 2344589999999999999999999999999999999999999999999999999999997642211111
Q ss_pred -----------HHhhcCCccccCC----CCCcceeEEechhhhcCCH-HHHHHHHhccCcEEEEecChhhHHHHHHHHHH
Q psy3624 631 -----------IAKRRRVPVSSLD----PRESTTIVIQGSILRDMTT-EQLENVLRTHREIVFARTSPTQKLHIVEGCQR 694 (1010)
Q Consensus 631 -----------~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~ 694 (1010)
+.+....+..... -.+.+.++++|..++++.. +.+.+++.+.. ||||+.|.||..++..+++
T Consensus 727 ~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~--VfARvaP~QKE~ii~tlK~ 804 (1160)
T KOG0209|consen 727 EGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVW--VFARVAPKQKEFIITTLKK 804 (1160)
T ss_pred cCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhhee--EEEeeChhhHHHHHHHHHh
Confidence 1111111111111 1124567899999887754 35677777776 9999999999999999999
Q ss_pred cCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHH--------------------------------------------
Q psy3624 695 LGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSK-------------------------------------------- 730 (1010)
Q Consensus 695 ~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak-------------------------------------------- 730 (1010)
.|+.++|||||.||++|||+||||||+= ++.+..+
T Consensus 805 ~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 883 (1160)
T KOG0209|consen 805 LGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEK 883 (1160)
T ss_pred cCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHH
Confidence 9999999999999999999999999985 3333110
Q ss_pred ---------------------------hhcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHh
Q psy3624 731 ---------------------------QTADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVI 783 (1010)
Q Consensus 731 ---------------------------~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~ 783 (1010)
-||.+.-...+.++|.+.|++||++.-+.-+.+... +-|.. +...-.+.+.
T Consensus 884 ~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL-ALN~L-isAYslSvly 961 (1160)
T KOG0209|consen 884 TRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL-ALNCL-ISAYSLSVLY 961 (1160)
T ss_pred HHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH-HHHHH-HHHHHHHHhh
Confidence 023333344467889999999999988877665543 22321 1122222233
Q ss_pred ccCchhHHHHHHHHHHhhchHHHHHhcccCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3624 784 GIPLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQN 863 (1010)
Q Consensus 784 ~~~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 863 (1010)
.-..-++..|...--+++.. ..+++.-.+|-+.+-+..|. .++++...+..+.+|+.+= .. .+.|..-..+.
T Consensus 962 ldGVKfgD~QaTisGlLla~-cFlfISrskPLetLSkeRP~----~nIFN~Y~i~svl~QFaVH-~~--tLvYi~~~a~~ 1033 (1160)
T KOG0209|consen 962 LDGVKFGDTQATISGLLLAA-CFLFISRSKPLETLSKERPL----PNIFNVYIILSVLLQFAVH-IA--TLVYITGEAYK 1033 (1160)
T ss_pred hcCceecchhHhHHHHHHHH-HHhheecCCchhhHhhcCCC----CCcchHHHHHHHHHHHHHH-HH--HhhhhHHHHHh
Confidence 22345566676655544432 23445666788888887775 3566655555444443211 11 11111111110
Q ss_pred CCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccccCc-cChhHH
Q psy3624 864 GWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGM-NNWVLN 942 (1010)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~-~n~~~~ 942 (1010)
.-++.. .-+++..+.. ....|..|+.....|+...... .++. +|+.+. .|+.+.
T Consensus 1034 ~~p~~~------------~vdl~~~F~P-----------sllNt~vyiisl~~QvsTFAVN-Y~G~-PF~Esl~eNK~l~ 1088 (1160)
T KOG0209|consen 1034 LEPPEE------------KVDLEEKFSP-----------SLLNTTVYIISLAQQVSTFAVN-YQGR-PFRESLRENKGLL 1088 (1160)
T ss_pred cCCccc------------ccChhcccCh-----------hhhhhHHHHHHHHHHHHHhhhh-ccCc-chhhhhhhccchH
Confidence 000000 0111111111 1234555555555666544432 2232 477665 899888
Q ss_pred HHHHHHHHHHHHHh--ccccccccccccccCchhHH----HHHHHHHHHHHHHHHHHHHHhhCC
Q psy3624 943 FGIVFETVAACIVS--YCPGMDEILKTYPVRAEWWL----PAVPFAIVIFIYDECRRFWLRTHP 1000 (1010)
Q Consensus 943 ~~i~~~~~~~~~~~--~ip~l~~~f~~~~l~~~~wl----~~l~~~~~~l~~~e~~K~~~r~~~ 1000 (1010)
++++++..+.+.+. ..|-++.-|...++|-.+-. ..++-.+++++++.+.|++.+..+
T Consensus 1089 y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~~~k 1152 (1160)
T KOG0209|consen 1089 YGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFGDHK 1152 (1160)
T ss_pred HHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 88776655544433 55778888999998843322 223334456678888888776443
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-76 Score=690.41 Aligned_cols=501 Identities=28% Similarity=0.400 Sum_probs=428.8
Q ss_pred hhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEe-CCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeC
Q psy3624 120 WLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIR-DGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESH 198 (1010)
Q Consensus 120 ~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R-~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~ 198 (1010)
..+.++++++.+...++.+...|+.+++++|.++.|+++++++ ||++++|+.++|+|||+|.|+|||+||+||+|++|+
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~ 254 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS 254 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc
Confidence 4456677777888888989999999999999999999998887 555999999999999999999999999999999999
Q ss_pred ceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHH
Q psy3624 199 GFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIH 278 (1010)
Q Consensus 199 ~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~ 278 (1010)
+ .||||+|||||.|+.|.+++. +++||.+.+|.....|+++|.+|.+++|.+++++++..++|.|+.++
T Consensus 255 s-~vDeS~iTGEs~PV~k~~Gd~----------V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaD 323 (713)
T COG2217 255 S-SVDESMLTGESLPVEKKPGDE----------VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLAD 323 (713)
T ss_pred E-EeecchhhCCCCCEecCCCCE----------EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHH
Confidence 8 899999999999999999986 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcC
Q psy3624 279 HFMHLISAWAIFLGVTFFFLSFALG-YAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLG 357 (1010)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg 357 (1010)
++..++++..++++++.|++|++.+ .+|..++..++++++++|||+|.+++|++...++.+.+++|+++|+..++|.++
T Consensus 324 r~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~ 403 (713)
T COG2217 324 RVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLA 403 (713)
T ss_pred HHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhc
Confidence 9999999988888888777777666 588999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccc
Q psy3624 358 STSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREV 437 (1010)
Q Consensus 358 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~ 437 (1010)
++|+++||||||||+|+|+|+++...+. +..+.+..++++...++
T Consensus 404 ~v~tvvFDKTGTLT~G~p~v~~v~~~~~--------------------~e~~~L~laAalE~~S~--------------- 448 (713)
T COG2217 404 KVDTVVFDKTGTLTEGKPEVTDVVALDG--------------------DEDELLALAAALEQHSE--------------- 448 (713)
T ss_pred cCCEEEEeCCCCCcCCceEEEEEecCCC--------------------CHHHHHHHHHHHHhcCC---------------
Confidence 9999999999999999999999865321 11133555666655433
Q ss_pred cCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhccccccCCccccC
Q psy3624 438 MGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVEL 517 (1010)
Q Consensus 438 ~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l 517 (1010)
+|.-.|+.++++..+... ......+| .+.... .-+| ..+.-|+++.+.+.-.. .
T Consensus 449 --HPiA~AIv~~a~~~~~~~------~~~~~~i~---G~Gv~~----~v~g--~~v~vG~~~~~~~~~~~---------~ 502 (713)
T COG2217 449 --HPLAKAIVKAAAERGLPD------VEDFEEIP---GRGVEA----EVDG--ERVLVGNARLLGEEGID---------L 502 (713)
T ss_pred --ChHHHHHHHHHHhcCCCC------ccceeeec---cCcEEE----EECC--EEEEEcCHHHHhhcCCC---------c
Confidence 566778888766543110 01112222 111111 1133 23345888776542110 1
Q ss_pred CHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCC
Q psy3624 518 DAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAG 597 (1010)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aG 597 (1010)
+. ..+..+.+..+|..++.++ .|..++|+++++|++||+++++|++||+.|
T Consensus 503 ~~-----~~~~~~~~~~~G~t~v~va------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~G 553 (713)
T COG2217 503 PL-----LSERIEALESEGKTVVFVA------------------------VDGKLVGVIALADELRPDAKEAIAALKALG 553 (713)
T ss_pred cc-----hhhhHHHHHhcCCeEEEEE------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCC
Confidence 10 3455667778898877776 345899999999999999999999999999
Q ss_pred CeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEE
Q psy3624 598 IRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVF 677 (1010)
Q Consensus 598 i~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 677 (1010)
++++|+|||+..+|+++|+++||++ ++
T Consensus 554 i~~~mLTGDn~~~A~~iA~~lGId~-----------------------------------------------------v~ 580 (713)
T COG2217 554 IKVVMLTGDNRRTAEAIAKELGIDE-----------------------------------------------------VR 580 (713)
T ss_pred CeEEEEcCCCHHHHHHHHHHcChHh-----------------------------------------------------he
Confidence 9999999999999999999999954 89
Q ss_pred EecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHH
Q psy3624 678 ARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFD 757 (1010)
Q Consensus 678 ~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~ 757 (1010)
+.+.|++|.++|+.+|++|++|+|+|||.||+|+|.+|||||||| +|+|.++++||+++.++++..++++++.+|++++
T Consensus 581 AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~ 659 (713)
T COG2217 581 AELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRR 659 (713)
T ss_pred ccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhHHHHH
Q psy3624 758 NLKKSIAYTLASNVPEIT 775 (1010)
Q Consensus 758 ~i~~~~~~~l~~n~~~~~ 775 (1010)
+||+|+.|++.||...+.
T Consensus 660 ~IkqNl~~A~~yn~~~ip 677 (713)
T COG2217 660 IIKQNLFWAFGYNAIAIP 677 (713)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999986553
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.7e-73 Score=688.52 Aligned_cols=496 Identities=25% Similarity=0.376 Sum_probs=426.4
Q ss_pred hhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCc
Q psy3624 120 WLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHG 199 (1010)
Q Consensus 120 ~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~ 199 (1010)
..+.++++++.+..+++.++++|+++.+++|.++.|.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|+.
T Consensus 207 ~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~ 286 (741)
T PRK11033 207 AEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA 286 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE
Confidence 33556667778888999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred eEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHH
Q psy3624 200 FKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHH 279 (1010)
Q Consensus 200 l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~ 279 (1010)
.||||+|||||.|+.|++++. +|+||.+.+|.+++.|+++|.+|.+|+|.+++++++.+++|+++.+++
T Consensus 287 -~vdes~lTGEs~Pv~k~~Gd~----------V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~ 355 (741)
T PRK11033 287 -SFDESALTGESIPVERATGEK----------VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDR 355 (741)
T ss_pred -EeecccccCCCCCEecCCCCe----------eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHH
Confidence 899999999999999999865 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCC
Q psy3624 280 FMHLISAWAIFLGVTFFFLS-FALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGS 358 (1010)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~ 358 (1010)
+..++++++++++++.++++ +..+.+|...+..++++++++|||+|.++.+++...+..+++|+|+++|+..++|+|++
T Consensus 356 ~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~ 435 (741)
T PRK11033 356 FSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGR 435 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhC
Confidence 99999999888888887776 44456788889999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHH-HhhhcCCccccCChhhhhhhcccc
Q psy3624 359 TSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTL-AGSLCNRAEFTPNQEKIQILKREV 437 (1010)
Q Consensus 359 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~lc~~~~~~~~~~~~~~~~~~~ 437 (1010)
+|++|||||||||+|+|+|.++...+.. . .+.++. ++++.. .
T Consensus 436 v~~v~fDKTGTLT~g~~~v~~~~~~~~~-------------------~-~~~~l~~aa~~e~-----------------~ 478 (741)
T PRK11033 436 VTTVAFDKTGTLTEGKPQVTDIHPATGI-------------------S-ESELLALAAAVEQ-----------------G 478 (741)
T ss_pred CCEEEEeCCCCCcCCceEEEEEEecCCC-------------------C-HHHHHHHHHHHhc-----------------C
Confidence 9999999999999999999988542210 0 112222 222221 1
Q ss_pred cCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEE--EEEeCCCeEEEEEeCChHHHHHhccccccCCccc
Q psy3624 438 MGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVS--IHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDV 515 (1010)
Q Consensus 438 ~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~--v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~ 515 (1010)
..+|.+.|++++++..+. .+||.++++.+.. +....+|+.+ ..|+++.+.+
T Consensus 479 s~hPia~Ai~~~a~~~~~-------------~~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~------------ 531 (741)
T PRK11033 479 STHPLAQAIVREAQVRGL-------------AIPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP------------ 531 (741)
T ss_pred CCCHHHHHHHHHHHhcCC-------------CCCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh------------
Confidence 247888999988764321 2566666665432 2222234332 3488876642
Q ss_pred cCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHH
Q psy3624 516 ELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRS 595 (1010)
Q Consensus 516 ~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~ 595 (1010)
++ +.+.+.++++..+|+|++++++ |.+++|+++++|++||+++++|++|++
T Consensus 532 -~~----~~~~~~~~~~~~~g~~~v~va~------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~ 582 (741)
T PRK11033 532 -LA----DAFAGQINELESAGKTVVLVLR------------------------NDDVLGLIALQDTLRADARQAISELKA 582 (741)
T ss_pred -cc----HHHHHHHHHHHhCCCEEEEEEE------------------------CCEEEEEEEEecCCchhHHHHHHHHHH
Confidence 12 2244456678899999999984 357999999999999999999999999
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcE
Q psy3624 596 AGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREI 675 (1010)
Q Consensus 596 aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 675 (1010)
+|++++|+|||+..++.++|+++||.
T Consensus 583 ~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------------------------------ 608 (741)
T PRK11033 583 LGIKGVMLTGDNPRAAAAIAGELGID------------------------------------------------------ 608 (741)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------------------------------
Confidence 99999999999999999999999994
Q ss_pred EEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhh
Q psy3624 676 VFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLI 755 (1010)
Q Consensus 676 v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~ 755 (1010)
.+++..|++|.++++.+|+. +.|+|+|||.||+|||++||+||||| ++++.++++||+++.++++.++.++++.||++
T Consensus 609 ~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~ 686 (741)
T PRK11033 609 FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRAT 686 (741)
T ss_pred eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHH
Confidence 46678999999999999965 58999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHhhhHHHHH
Q psy3624 756 FDNLKKSIAYTLASNVPEIT 775 (1010)
Q Consensus 756 ~~~i~~~~~~~l~~n~~~~~ 775 (1010)
++||++|+.|++.+|+..+.
T Consensus 687 ~~~I~~nl~~a~~~n~~~i~ 706 (741)
T PRK11033 687 HANIRQNITIALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999976543
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=3.5e-72 Score=659.24 Aligned_cols=473 Identities=36% Similarity=0.540 Sum_probs=416.5
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHhhh--ccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEEe
Q psy3624 127 TVCIITGIFSYSQEAKSARIMDSFKN--MVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVDN 204 (1010)
Q Consensus 127 ~v~~i~~~~~~~~~~k~~~~~~~l~~--~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vde 204 (1010)
+++++..+++.++++++++..+++.+ +.|++++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEc
Confidence 45566778899999999999999998 888999999999 999999999999999999999999999999996 58999
Q ss_pred ecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHH-HH
Q psy3624 205 SSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFM-HL 283 (1010)
Q Consensus 205 s~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~-~~ 283 (1010)
|+|||||.|+.|.+++. +++|+.+.+|+.+..|+.+|.+|..+++...+......++++++..+++. .+
T Consensus 82 s~LTGEs~pv~k~~g~~----------v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~ 151 (499)
T TIGR01494 82 SNLTGESVPVLKTAGDA----------VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDII 151 (499)
T ss_pred ccccCCCCCeeeccCCc----------cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHH
Confidence 99999999999998764 89999999999999999999999999999998887777899999999998 67
Q ss_pred HHHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCce
Q psy3624 284 ISAWAIFLGVTFFFLSFALGY---AWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTS 360 (1010)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~ 360 (1010)
++++.++++++.++.+..... +|...+..++++++++|||+|++++++++..+..+|+++|+++|+++++|+||++|
T Consensus 152 ~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~ 231 (499)
T TIGR01494 152 FILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVD 231 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCc
Confidence 776666666666665554433 37889999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCC
Q psy3624 361 TICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGD 440 (1010)
Q Consensus 361 ~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~ 440 (1010)
++|||||||||+|+|+|.+++..+. +...++
T Consensus 232 ~i~fDKTGTLT~~~~~v~~~~~~~~-------------------------------------------------~~~s~h 262 (499)
T TIGR01494 232 YICSDKTGTLTKNEMSFKKVSVLGG-------------------------------------------------EYLSGH 262 (499)
T ss_pred EEEeeCCCccccCceEEEEEEecCC-------------------------------------------------CcCCCC
Confidence 9999999999999999998864321 012457
Q ss_pred hhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhccccccCCccccCCHH
Q psy3624 441 ASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVELDAK 520 (1010)
Q Consensus 441 ~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 520 (1010)
|.+.|++++++.. .....||++.+++++.+++..++ .++||+++.+.+.|..
T Consensus 263 p~~~ai~~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------- 314 (499)
T TIGR01494 263 PDERALVKSAKWK------------ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------- 314 (499)
T ss_pred hHHHHHHHHhhhc------------CcceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------------
Confidence 8889998887541 12467999999888777765333 3689999999998852
Q ss_pred hHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeE
Q psy3624 521 NRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRV 600 (1010)
Q Consensus 521 ~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v 600 (1010)
+.+..++++.+|+|++++|++. +++|++.++|++|++++++|+.|+++|+++
T Consensus 315 ----~~~~~~~~~~~g~~~~~~a~~~------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~ 366 (499)
T TIGR01494 315 ----LEEKVKELAQSGLRVLAVASKE------------------------TLLGLLGLEDPLRDDAKETISELREAGIRV 366 (499)
T ss_pred ----HHHHHHHHHhCCCEEEEEEECC------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeE
Confidence 2234456778999999999631 589999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEec
Q psy3624 601 IMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFART 680 (1010)
Q Consensus 601 ~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~ 680 (1010)
+|+|||+..+|..+|+++|+ ++++
T Consensus 367 ~~ltGD~~~~a~~ia~~lgi--------------------------------------------------------~~~~ 390 (499)
T TIGR01494 367 IMLTGDNVLTAKAIAKELGI--------------------------------------------------------FARV 390 (499)
T ss_pred EEEcCCCHHHHHHHHHHcCc--------------------------------------------------------eecc
Confidence 99999999999999999986 5778
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhHH
Q psy3624 681 SPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNLK 760 (1010)
Q Consensus 681 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i~ 760 (1010)
+|++|.++++.+|+.|+.|+|+|||.||++|+++||+||||| ++++||+++.++++..+..++++||+++++++
T Consensus 391 ~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~ 464 (499)
T TIGR01494 391 TPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIK 464 (499)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997 68999999999999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHH
Q psy3624 761 KSIAYTLASNVPEITPFL 778 (1010)
Q Consensus 761 ~~~~~~l~~n~~~~~~~~ 778 (1010)
+++.|.+.+|+..+...+
T Consensus 465 ~~~~~~~~~n~~~~~~a~ 482 (499)
T TIGR01494 465 SNIFWAIAYNLILIPLAA 482 (499)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999987554433
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=9.8e-72 Score=660.80 Aligned_cols=507 Identities=26% Similarity=0.402 Sum_probs=422.8
Q ss_pred hhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCC-eEEEEeCCCccCCcEEEecCCCeecccEEEEE
Q psy3624 118 NLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDG-QKKTILSSELVRGDVVDVKFGDRIPADIRIIE 196 (1010)
Q Consensus 118 ~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g-~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~ 196 (1010)
.+..+++++++++++.++++++++|+++.++++.++.|++++|+||| ++++|++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 34567788888899999999999999999999999999999999996 99999999999999999999999999999999
Q ss_pred eCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHH
Q psy3624 197 SHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKE 276 (1010)
Q Consensus 197 ~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 276 (1010)
|+. .||||+|||||.|+.|++++. +|+||.+.+|+++++|++||.+|++|++.+++...+.+++|+++.
T Consensus 97 g~~-~vdes~lTGEs~pv~k~~g~~----------v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~ 165 (556)
T TIGR01525 97 GES-EVDESALTGESMPVEKKEGDE----------VFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRL 165 (556)
T ss_pred cce-EEeehhccCCCCCEecCCcCE----------EeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHH
Confidence 985 899999999999999998754 999999999999999999999999999999888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhc
Q psy3624 277 IHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETL 356 (1010)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~l 356 (1010)
+++++.++++++++++++.+++++..+.. ..+..++++++++|||+|++++++++..+..+++++|+++|+++++|++
T Consensus 166 ~~~~a~~~~~~~l~~a~~~~~~~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l 243 (556)
T TIGR01525 166 ADRIASYYVPAVLAIALLTFVVWLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKL 243 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHh
Confidence 99999999988888888877776654433 7888999999999999999999999999999999999999999999999
Q ss_pred CCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhccc
Q psy3624 357 GSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKRE 436 (1010)
Q Consensus 357 g~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~ 436 (1010)
|++|++|||||||||+|+|+|.++...+... . ..++++..++.+. .
T Consensus 244 ~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-----------------~-~~~~~l~~a~~~e----------------~ 289 (556)
T TIGR01525 244 AKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-----------------I-SEEELLALAAALE----------------Q 289 (556)
T ss_pred hcCCEEEEeCCCCCcCCceEEEEEEecCCCC-----------------c-cHHHHHHHHHHHh----------------c
Confidence 9999999999999999999999886532110 0 0112222222111 1
Q ss_pred ccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhccccccCCcccc
Q psy3624 437 VMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVE 516 (1010)
Q Consensus 437 ~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 516 (1010)
...+|.+.|++++++..+.+... .+ ...++ ++..+..+++|+++..+..|+....++.
T Consensus 290 ~~~hp~~~Ai~~~~~~~~~~~~~---~~-~~~~~---------------~~~gi~~~~~g~~~~~lg~~~~~~~~~~--- 347 (556)
T TIGR01525 290 SSSHPLARAIVRYAKKRGLELPK---QE-DVEEV---------------PGKGVEATVDGQEEVRIGNPRLLELAAE--- 347 (556)
T ss_pred cCCChHHHHHHHHHHhcCCCccc---cc-CeeEe---------------cCCeEEEEECCeeEEEEecHHHHhhcCC---
Confidence 13478899999998765332111 00 11111 1112223333433333333332111111
Q ss_pred CCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHC
Q psy3624 517 LDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSA 596 (1010)
Q Consensus 517 l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~a 596 (1010)
.....++..+.++.+|+|++.++. |.+++|.+.++|+++|+++++|++|+++
T Consensus 348 ----~~~~~~~~~~~~~~~g~~~~~v~~------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~ 399 (556)
T TIGR01525 348 ----PISASPDLLNEGESQGKTVVFVAV------------------------DGELLGVIALRDQLRPEAKEAIAALKRA 399 (556)
T ss_pred ----CchhhHHHHHHHhhCCcEEEEEEE------------------------CCEEEEEEEecccchHhHHHHHHHHHHc
Confidence 111223455677889999998872 4589999999999999999999999999
Q ss_pred C-CeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcE
Q psy3624 597 G-IRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREI 675 (1010)
Q Consensus 597 G-i~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 675 (1010)
| ++++|+|||+..++..+++++|+..
T Consensus 400 g~i~v~ivTgd~~~~a~~i~~~lgi~~----------------------------------------------------- 426 (556)
T TIGR01525 400 GGIKLVMLTGDNRSAAEAVAAELGIDE----------------------------------------------------- 426 (556)
T ss_pred CCCeEEEEeCCCHHHHHHHHHHhCCCe-----------------------------------------------------
Confidence 9 9999999999999999999999943
Q ss_pred EEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhh
Q psy3624 676 VFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLI 755 (1010)
Q Consensus 676 v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~ 755 (1010)
+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+|++|| ++++.+++.||+++.+++++.+.++++.||++
T Consensus 427 ~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~ 505 (556)
T TIGR01525 427 VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKT 505 (556)
T ss_pred eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHhhhHHHHH
Q psy3624 756 FDNLKKSIAYTLASNVPEIT 775 (1010)
Q Consensus 756 ~~~i~~~~~~~l~~n~~~~~ 775 (1010)
++|+++++.|++.+|+..+.
T Consensus 506 ~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 506 RRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987653
No 29
>KOG0207|consensus
Probab=100.00 E-value=3.5e-72 Score=636.99 Aligned_cols=542 Identities=25% Similarity=0.365 Sum_probs=440.2
Q ss_pred hhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCe-EEEEeCCCccCCcEEEecCCCeecccEEEEEeCc
Q psy3624 121 LGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQ-KKTILSSELVRGDVVDVKFGDRIPADIRIIESHG 199 (1010)
Q Consensus 121 ~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~-~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~ 199 (1010)
+..+++.++.+..+++...+.|+..++.+|.++.|.++.++.+|+ .++|+.+.|++||+|.+.||++||+||++++|++
T Consensus 343 t~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss 422 (951)
T KOG0207|consen 343 TSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS 422 (951)
T ss_pred ccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce
Confidence 445555667777778888888888999999999999999999997 8899999999999999999999999999999996
Q ss_pred eEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHH
Q psy3624 200 FKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHH 279 (1010)
Q Consensus 200 l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~ 279 (1010)
.||||.+|||+.|+.|++++. +.+||...+|.....++++|.+|.+++|.+++++++..++|+|+.+|+
T Consensus 423 -~VDEs~iTGEs~PV~Kk~gs~----------ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDk 491 (951)
T KOG0207|consen 423 -EVDESLITGESMPVPKKKGST----------VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADK 491 (951)
T ss_pred -eechhhccCCceecccCCCCe----------eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHH
Confidence 899999999999999999976 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh-----------hHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceec
Q psy3624 280 FMHLISAWAIFLGVTFFFLSFALGY-----------AWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVK 348 (1010)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 348 (1010)
++.++.+..+++++..+++|.+.+. .+..++.+++++++++|||+|.++.|++.+.+....+++|+++|
T Consensus 492 ia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIK 571 (951)
T KOG0207|consen 492 IAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIK 571 (951)
T ss_pred hhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEc
Confidence 9999999999999988888877654 34567788999999999999999999999999999999999999
Q ss_pred chhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChh
Q psy3624 349 HLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQE 428 (1010)
Q Consensus 349 ~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~ 428 (1010)
..+.+|.+.++++|.||||||||+|++.|.++....+. ....+.+....+....++
T Consensus 572 Gge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~------------------~~~~e~l~~v~a~Es~Se------ 627 (951)
T KOG0207|consen 572 GGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP------------------ISLKEALALVAAMESGSE------ 627 (951)
T ss_pred CcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc------------------ccHHHHHHHHHHHhcCCc------
Confidence 99999999999999999999999999999998664331 011123444444443332
Q ss_pred hhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhcccc
Q psy3624 429 KIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTM 508 (1010)
Q Consensus 429 ~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~ 508 (1010)
+|...|+.++++....... .......-.|..+-+. ..+ ...+++ .+-|.-+.+...-..
T Consensus 628 -----------HPig~AIv~yak~~~~~~~----~~~~~~~~~~pg~g~~-~~~-~~~~~~---i~iGN~~~~~r~~~~- 686 (951)
T KOG0207|consen 628 -----------HPIGKAIVDYAKEKLVEPN----PEGVLSFEYFPGEGIY-VTV-TVDGNE---VLIGNKEWMSRNGCS- 686 (951)
T ss_pred -----------CchHHHHHHHHHhcccccC----ccccceeecccCCCcc-cce-EEeeeE---EeechHHHHHhcCCC-
Confidence 5667899999876541100 0000011112111111 111 111222 345776666543211
Q ss_pred ccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHH
Q psy3624 509 KQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPD 588 (1010)
Q Consensus 509 ~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~ 588 (1010)
..+.+++..++...+|..+..++. |.+++|++.++|++|+|+..
T Consensus 687 ------------~~~~i~~~~~~~e~~g~tvv~v~v------------------------n~~l~gv~~l~D~vr~~a~~ 730 (951)
T KOG0207|consen 687 ------------IPDDILDALTESERKGQTVVYVAV------------------------NGQLVGVFALEDQVRPDAAL 730 (951)
T ss_pred ------------CchhHHHhhhhHhhcCceEEEEEE------------------------CCEEEEEEEeccccchhHHH
Confidence 123366677777788988888773 56899999999999999999
Q ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHH
Q psy3624 589 AVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENV 668 (1010)
Q Consensus 589 aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 668 (1010)
+|+.||+.|++++|+||||..+|+++|+++|+..
T Consensus 731 av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~---------------------------------------------- 764 (951)
T KOG0207|consen 731 AVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN---------------------------------------------- 764 (951)
T ss_pred HHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce----------------------------------------------
Confidence 9999999999999999999999999999999743
Q ss_pred HhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHH
Q psy3624 669 LRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTG 748 (1010)
Q Consensus 669 ~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~ 748 (1010)
|++...|+||.+.|+.+|+++..|+|+|||.||+|+|.+|||||||| .|++.|.++||+|+..|++.+++.+
T Consensus 765 -------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~a 836 (951)
T KOG0207|consen 765 -------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFA 836 (951)
T ss_pred -------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHH
Confidence 99999999999999999999999999999999999999999999999 8899999999999999999999999
Q ss_pred HHHhhhhHHhHHHHHHHHHhhhHHHHHHHHHHHHhccC---chhHHHHHHHHHHhhchHHHHHh
Q psy3624 749 VEEGRLIFDNLKKSIAYTLASNVPEITPFLMFIVIGIP---LPLGVVAILCIDLGTDMWPAISL 809 (1010)
Q Consensus 749 i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~---~pl~~~~il~~~l~~~~l~~~~l 809 (1010)
|+.+|++..|+|.|+.|++.||+..+- .....|+.++ +|..+......+.+...+.++.|
T Consensus 837 i~LSrkt~~rIk~N~~~A~~yn~~~Ip-IAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllL 899 (951)
T KOG0207|consen 837 IDLSRKTVKRIKLNFVWALIYNLVGIP-IAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLL 899 (951)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhhh-hheecccCCccccCchHHHHHHHhhhHHHhhhHHHH
Confidence 999999999999999999999986543 2223333333 23333333444545555555555
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.4e-70 Score=646.20 Aligned_cols=488 Identities=25% Similarity=0.386 Sum_probs=410.9
Q ss_pred hhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEe
Q psy3624 118 NLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIES 197 (1010)
Q Consensus 118 ~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~ 197 (1010)
.++.+.+++++++++..++.++++|+++.++++.++.|++++|+|||++++|++++|+|||+|.+++||+|||||++++|
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g 96 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSG 96 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeC
Confidence 35566777788888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHH
Q psy3624 198 HGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEI 277 (1010)
Q Consensus 198 ~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~ 277 (1010)
+. .||||+|||||.|+.|++++. +|+||.+.+|+++++|++||.+|.+|++.+++...+.+++|+++.+
T Consensus 97 ~~-~vdes~lTGEs~pv~k~~g~~----------v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~ 165 (536)
T TIGR01512 97 TS-TVDESALTGESVPVEKAPGDE----------VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFI 165 (536)
T ss_pred cE-EEEecccCCCCCcEEeCCCCE----------EEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHH
Confidence 75 899999999999999998754 9999999999999999999999999999999988888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcC
Q psy3624 278 HHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLG 357 (1010)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg 357 (1010)
+++..+++++++.++++.+++++.... +...+.+++++++++|||+|++++++++..+..+++|+|+++|+++++|++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~ 244 (536)
T TIGR01512 166 DRFARYYTPVVLAIALAIWLVPGLLKR-WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALA 244 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhc
Confidence 999999988888777777766654432 3337888999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccc
Q psy3624 358 STSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREV 437 (1010)
Q Consensus 358 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~ 437 (1010)
++|++|||||||||+|+|+|.++... +++..++.+. ..
T Consensus 245 ~v~~i~fDKTGTLT~~~~~v~~~~~~--------------------------~~l~~a~~~e----------------~~ 282 (536)
T TIGR01512 245 KIKTVAFDKTGTLTTGRPKVVDVVPA--------------------------EVLRLAAAAE----------------QA 282 (536)
T ss_pred CCCEEEECCCCCCcCCceEEEEeeHH--------------------------HHHHHHHHHh----------------cc
Confidence 99999999999999999999887421 1222222111 11
Q ss_pred cCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhccccccCCccccC
Q psy3624 438 MGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVEL 517 (1010)
Q Consensus 438 ~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l 517 (1010)
..+|.+.|++++++... ......++|. +. +....+|.. +..|+++.+.+.. .
T Consensus 283 ~~hp~~~Ai~~~~~~~~--------~~~~~~~~~g---~g----i~~~~~g~~--~~ig~~~~~~~~~-----------~ 334 (536)
T TIGR01512 283 SSHPLARAIVDYARKRE--------NVESVEEVPG---EG----VRAVVDGGE--VRIGNPRSLEAAV-----------G 334 (536)
T ss_pred CCCcHHHHHHHHHHhcC--------CCcceEEecC---Ce----EEEEECCeE--EEEcCHHHHhhcC-----------C
Confidence 23678889988876432 1111122221 11 111112332 2347775543210 0
Q ss_pred CHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCC
Q psy3624 518 DAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAG 597 (1010)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aG 597 (1010)
..+..+|.+++.++ .|..++|.+.++|+++|+++++|++|+++|
T Consensus 335 ------------~~~~~~~~~~~~v~------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~G 378 (536)
T TIGR01512 335 ------------ARPESAGKTIVHVA------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALG 378 (536)
T ss_pred ------------cchhhCCCeEEEEE------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcC
Confidence 03445676665554 457899999999999999999999999999
Q ss_pred C-eEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEE
Q psy3624 598 I-RVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIV 676 (1010)
Q Consensus 598 i-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 676 (1010)
+ +++|+|||+..++..+++++|+.. +
T Consensus 379 i~~v~vvTgd~~~~a~~i~~~lgi~~-----------------------------------------------------~ 405 (536)
T TIGR01512 379 IEKVVMLTGDRRAVAERVARELGIDE-----------------------------------------------------V 405 (536)
T ss_pred CCcEEEEcCCCHHHHHHHHHHcCChh-----------------------------------------------------h
Confidence 9 999999999999999999999953 7
Q ss_pred EEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhH
Q psy3624 677 FARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIF 756 (1010)
Q Consensus 677 ~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~ 756 (1010)
|++..|++|.++++.+++.++.|+|+|||.||++|+++||+||+||.++++.++++||+++.++++..+.++++.||+++
T Consensus 406 f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~ 485 (536)
T TIGR01512 406 HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTR 485 (536)
T ss_pred hhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999996689999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhhHHHHHH
Q psy3624 757 DNLKKSIAYTLASNVPEITP 776 (1010)
Q Consensus 757 ~~i~~~~~~~l~~n~~~~~~ 776 (1010)
+|+++++.|++.+|+..+..
T Consensus 486 ~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 486 RIVKQNVVIALGIILLLILL 505 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999765543
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=4.8e-69 Score=666.04 Aligned_cols=500 Identities=23% Similarity=0.335 Sum_probs=424.1
Q ss_pred hhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceE
Q psy3624 122 GIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFK 201 (1010)
Q Consensus 122 ~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~ 201 (1010)
+..+++++.+..+++.+.+.|+.+.+++|.++.|++++|+|||++++|+.++|+|||+|.|++||+|||||+|++|+ ..
T Consensus 289 ~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~ 367 (834)
T PRK10671 289 SAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AW 367 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EE
Confidence 56666777888889999999999999999999999999999999999999999999999999999999999999997 48
Q ss_pred EEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHH
Q psy3624 202 VDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFM 281 (1010)
Q Consensus 202 Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~ 281 (1010)
||||+|||||.|+.|.+++. +|+||.+.+|.+++.|+++|.+|.+|++.+++++++..++|+++.++++.
T Consensus 368 vdeS~lTGEs~pv~k~~gd~----------V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a 437 (834)
T PRK10671 368 LDEAMLTGEPIPQQKGEGDS----------VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKIS 437 (834)
T ss_pred EeehhhcCCCCCEecCCCCE----------EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 99999999999999999875 99999999999999999999999999999999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCc
Q psy3624 282 HLISAWAIFLGVTFFFLSFALGYA--WIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGST 359 (1010)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v 359 (1010)
.++++++++++++.+++|+..+.. |...+.+++++++++|||+|++++++++..+..+++|+|+++|+++++|+++++
T Consensus 438 ~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v 517 (834)
T PRK10671 438 AVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTL 517 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCC
Confidence 999888888887777776655432 566788899999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccC
Q psy3624 360 STICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMG 439 (1010)
Q Consensus 360 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g 439 (1010)
|++|||||||||+|+|+|.++...+. ....+.+..+++++..+ .
T Consensus 518 ~~v~fDKTGTLT~g~~~v~~~~~~~~-------------------~~~~~~l~~a~~~e~~s-----------------~ 561 (834)
T PRK10671 518 DTLVFDKTGTLTEGKPQVVAVKTFNG-------------------VDEAQALRLAAALEQGS-----------------S 561 (834)
T ss_pred CEEEEcCCCccccCceEEEEEEccCC-------------------CCHHHHHHHHHHHhCCC-----------------C
Confidence 99999999999999999988753221 00112234444554432 2
Q ss_pred ChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhccccccCCccccCCH
Q psy3624 440 DASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVELDA 519 (1010)
Q Consensus 440 ~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~ 519 (1010)
+|.+.|++++++.... .. ..+|.......... ..+|.. +.+|+++.+.+.. +.
T Consensus 562 hp~a~Ai~~~~~~~~~---------~~--~~~~~~~~g~Gv~~--~~~g~~--~~~G~~~~~~~~~-----------~~- 614 (834)
T PRK10671 562 HPLARAILDKAGDMTL---------PQ--VNGFRTLRGLGVSG--EAEGHA--LLLGNQALLNEQQ-----------VD- 614 (834)
T ss_pred CHHHHHHHHHHhhCCC---------CC--cccceEecceEEEE--EECCEE--EEEeCHHHHHHcC-----------CC-
Confidence 6778888877642110 00 01222222111111 123332 4569998764321 11
Q ss_pred HhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCe
Q psy3624 520 KNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIR 599 (1010)
Q Consensus 520 ~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~ 599 (1010)
++.+.+.++++..+|.+++.+++ |..++|++++.|++||+++++|++|++.|++
T Consensus 615 --~~~~~~~~~~~~~~g~~~v~va~------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~ 668 (834)
T PRK10671 615 --TKALEAEITAQASQGATPVLLAV------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYR 668 (834)
T ss_pred --hHHHHHHHHHHHhCCCeEEEEEE------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCe
Confidence 23455666778889999988874 3468999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEe
Q psy3624 600 VIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFAR 679 (1010)
Q Consensus 600 v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r 679 (1010)
++|+|||+..++..+++++|+.. +|++
T Consensus 669 v~~~Tgd~~~~a~~ia~~lgi~~-----------------------------------------------------~~~~ 695 (834)
T PRK10671 669 LVMLTGDNPTTANAIAKEAGIDE-----------------------------------------------------VIAG 695 (834)
T ss_pred EEEEcCCCHHHHHHHHHHcCCCE-----------------------------------------------------EEeC
Confidence 99999999999999999999953 8899
Q ss_pred cChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHHhH
Q psy3624 680 TSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFDNL 759 (1010)
Q Consensus 680 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~~i 759 (1010)
..|++|.++++.++.+++.|+|+|||.||++|+++||+||||| ++++.++++||+++.++++++|.++++.||+++.+|
T Consensus 696 ~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i 774 (834)
T PRK10671 696 VLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNM 774 (834)
T ss_pred CCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHH
Q psy3624 760 KKSIAYTLASNVPEIT 775 (1010)
Q Consensus 760 ~~~~~~~l~~n~~~~~ 775 (1010)
++|+.|++.||+..+.
T Consensus 775 ~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 775 KQNLLGAFIYNSLGIP 790 (834)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999986654
No 32
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2.5e-69 Score=637.37 Aligned_cols=491 Identities=24% Similarity=0.370 Sum_probs=409.1
Q ss_pred hhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeC-CeEEEEeCCCccCCcEEEecCCCeecccEEEEE
Q psy3624 118 NLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRD-GQKKTILSSELVRGDVVDVKFGDRIPADIRIIE 196 (1010)
Q Consensus 118 ~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~ 196 (1010)
++..+.++++++.+..+++.+.++|+++.+++|.++.|++++|+|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 3344556667777788899999999999999999999999999985 667999999999999999999999999999999
Q ss_pred eCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHH
Q psy3624 197 SHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKE 276 (1010)
Q Consensus 197 ~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 276 (1010)
|+. .||||+|||||.|+.|.+++. +|+||.+.+|.++++|+++|.+|.+|++.+++++++.+++|+++.
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~----------V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~ 201 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDP----------VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRL 201 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCE----------EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHH
Confidence 986 899999999999999999865 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhhc
Q psy3624 277 IHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETL 356 (1010)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~l 356 (1010)
+++++.++++++++++++.++.| ...+..++++++++|||+|++++++++..+..+++++|+++|++.++|+|
T Consensus 202 ~d~~a~~~~~~v~~~a~~~~~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l 274 (562)
T TIGR01511 202 ADKVAGYFVPVVIAIALITFVIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERA 274 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHh
Confidence 99999999888877776666543 25788899999999999999999999999999999999999999999999
Q ss_pred CCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhhhcCchhHHHHHHHhhhcCCccccCChhhhhhhccc
Q psy3624 357 GSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEKVRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKRE 436 (1010)
Q Consensus 357 g~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~ 436 (1010)
+++|++|||||||||+|+|++.++...+.. ...+.+..+++++.++
T Consensus 275 ~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-------------------~~~~~l~~aa~~e~~s--------------- 320 (562)
T TIGR01511 275 ANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-------------------DRTELLALAAALEAGS--------------- 320 (562)
T ss_pred hCCCEEEECCCCCCcCCCEEEEEEecCCCC-------------------CHHHHHHHHHHHhccC---------------
Confidence 999999999999999999999988543210 0011233344444322
Q ss_pred ccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEEEeCChHHHHHhccccccCCcccc
Q psy3624 437 VMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVE 516 (1010)
Q Consensus 437 ~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 516 (1010)
.+|.+.|++++++..+.... .......+| .+. ... . -+++ -+..|+++.+.+.. . .
T Consensus 321 --~HPia~Ai~~~~~~~~~~~~----~~~~~~~~~---g~G--i~~-~-~~g~--~~~iG~~~~~~~~~-------~--~ 376 (562)
T TIGR01511 321 --EHPLAKAIVSYAKEKGITLV----EVSDFKAIP---GIG--VEG-T-VEGT--KIQLGNEKLLGENA-------I--K 376 (562)
T ss_pred --CChHHHHHHHHHHhcCCCcC----CCCCeEEEC---Cce--EEE-E-ECCE--EEEEECHHHHHhCC-------C--C
Confidence 26778899888765432210 011111111 111 111 1 1222 23568887754321 0 1
Q ss_pred CCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHC
Q psy3624 517 LDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSA 596 (1010)
Q Consensus 517 l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~a 596 (1010)
++ ++.++|.+++.++ .|.+++|++.++|+++|+++++|++|++.
T Consensus 377 ~~------------~~~~~g~~~~~~~------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~ 420 (562)
T TIGR01511 377 ID------------GKAEQGSTSVLVA------------------------VNGELAGVFALEDQLRPEAKEVIQALKRR 420 (562)
T ss_pred CC------------hhhhCCCEEEEEE------------------------ECCEEEEEEEecccccHHHHHHHHHHHHc
Confidence 11 1235788877665 35689999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEE
Q psy3624 597 GIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIV 676 (1010)
Q Consensus 597 Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 676 (1010)
|++++|+|||+..++..+++++|+. +
T Consensus 421 Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------------------------------~ 446 (562)
T TIGR01511 421 GIEPVMLTGDNRKTAKAVAKELGIN------------------------------------------------------V 446 (562)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCc------------------------------------------------------E
Confidence 9999999999999999999999992 6
Q ss_pred EEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhH
Q psy3624 677 FARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLIF 756 (1010)
Q Consensus 677 ~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~ 756 (1010)
|++..|++|.++++.+++.++.|+|+|||.||++|+++||+||+|| ++++.+++.||+++.+++++.+.++++.||+++
T Consensus 447 ~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~ 525 (562)
T TIGR01511 447 RAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTL 525 (562)
T ss_pred EccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 7788999999999999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhhHHHHH
Q psy3624 757 DNLKKSIAYTLASNVPEIT 775 (1010)
Q Consensus 757 ~~i~~~~~~~l~~n~~~~~ 775 (1010)
++|++++.|++.+|+..+.
T Consensus 526 ~~i~qn~~~a~~~n~~~i~ 544 (562)
T TIGR01511 526 RRIKQNLLWAFGYNVIAIP 544 (562)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986553
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-59 Score=498.37 Aligned_cols=535 Identities=24% Similarity=0.336 Sum_probs=405.3
Q ss_pred HhhHHHHHHHHHHHHHHHHHHhhccccc--cccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhcc-CCceEEEe
Q psy3624 86 FEGFSVLLWTGAVLCFIAYLIEFHISED--ASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMV-PQYANVIR 162 (1010)
Q Consensus 86 ~~~f~~~l~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~-~~~~~V~R 162 (1010)
.+|.+++.|+..++..++.+.+...... ....+....+.+.+.+++..+-+.+.|-|.+...++|++.. ...+++++
T Consensus 31 kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~ 110 (681)
T COG2216 31 KNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLR 110 (681)
T ss_pred hCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhc
Confidence 4566677788877777555444322211 11111122233344445555666777777666666776543 23467777
Q ss_pred C-CeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeee
Q psy3624 163 D-GQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEG 241 (1010)
Q Consensus 163 ~-g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g 241 (1010)
+ |..+.+++.+|+.||+|.+++||.||+||.+++|.+ +||||.+||||.||.|.++... .-+-.||.+++.
T Consensus 111 ~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~-------ssVtGgT~v~SD 182 (681)
T COG2216 111 ADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDF-------SSVTGGTRVLSD 182 (681)
T ss_pred CCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCc-------ccccCCcEEeee
Confidence 5 899999999999999999999999999999999997 8999999999999999987532 126689999999
Q ss_pred eEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeec
Q psy3624 242 TAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANV 321 (1010)
Q Consensus 242 ~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~i 321 (1010)
+.+..+++...+|.+.|+..+++.++.++||-+--+..+..-+..+.+++.+.++-+..+.+ .-.-.+...++++++.+
T Consensus 183 ~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~-g~~~~i~~LiALlV~LI 261 (681)
T COG2216 183 WLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSG-GGAASVTVLVALLVCLI 261 (681)
T ss_pred eEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcC-CCCcCHHHHHHHHHHHh
Confidence 99999999999999999999999999999997765555544443333333222222222211 01124566788889999
Q ss_pred cCcchHHHHHHHHHHHHHhhcccceecchhhhhhcCCceEEEecCCcccccCceEEEEEEeCCeeeeecccCCCCCchhh
Q psy3624 322 PEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVTHLSFDKEVFEVDYFKDPTGLIEK 401 (1010)
Q Consensus 322 P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 401 (1010)
|-...-.++..=..++.|+.+.|++.++..++|.+|.+|++..|||||+|-|+-.-.++...+
T Consensus 262 PTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~----------------- 324 (681)
T COG2216 262 PTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP----------------- 324 (681)
T ss_pred cccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC-----------------
Confidence 998877777777778999999999999999999999999999999999999876665554322
Q ss_pred hcCchhHHHHHHHhhhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHhcCChHHHhhhcceeEeecCCCCCceEEE
Q psy3624 402 VRNMSSYKDLTLAGSLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELAIGDVVEFRNRHKKALEIPFNSTDKYQVS 481 (1010)
Q Consensus 402 ~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~f~s~~k~~~~ 481 (1010)
..+.+++..++.+++-..-+ |...++++++++.+.+..... .......+||+.+.|++.+
T Consensus 325 ---gv~~~~la~aa~lsSl~DeT----------------pEGrSIV~LA~~~~~~~~~~~-~~~~~~fvpFtA~TRmSGv 384 (681)
T COG2216 325 ---GVSEEELADAAQLASLADET----------------PEGRSIVELAKKLGIELREDD-LQSHAEFVPFTAQTRMSGV 384 (681)
T ss_pred ---CCCHHHHHHHHHHhhhccCC----------------CCcccHHHHHHHhccCCCccc-ccccceeeecceecccccc
Confidence 12234566666665533222 222355666665542211111 0112467899998876543
Q ss_pred EEEeCCCeEEEEEeCChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCCCCCCCCcCCCC
Q psy3624 482 IHIMPNNEYLLVMKGAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPAKFPAGFELKSD 561 (1010)
Q Consensus 482 v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~~~~~~~~ 561 (1010)
-. +++ .-+-|||.+.+.+..+. .+ ....+.++..+++.++.|-..|+++
T Consensus 385 d~--~~~--~~irKGA~dai~~~v~~---~~------g~~p~~l~~~~~~vs~~GGTPL~V~------------------ 433 (681)
T COG2216 385 DL--PGG--REIRKGAVDAIRRYVRE---RG------GHIPEDLDAAVDEVSRLGGTPLVVV------------------ 433 (681)
T ss_pred cC--CCC--ceeecccHHHHHHHHHh---cC------CCCCHHHHHHHHHHHhcCCCceEEE------------------
Confidence 22 232 45679999999987652 11 1224567788889999999999987
Q ss_pred CCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCcccc
Q psy3624 562 PPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSS 641 (1010)
Q Consensus 562 ~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~ 641 (1010)
.|..++|++.++|-++|+.+|-+.+||+.||+.+|+||||+.||..+|++.|++.
T Consensus 434 ------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------- 488 (681)
T COG2216 434 ------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------- 488 (681)
T ss_pred ------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-------------------
Confidence 3567999999999999999999999999999999999999999999999999965
Q ss_pred CCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEee
Q psy3624 642 LDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAM 721 (1010)
Q Consensus 642 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 721 (1010)
..+.++||+|.++++.-|..|+.|+|+|||.||+|+|.+||||+||
T Consensus 489 ----------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 489 ----------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred ----------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh
Confidence 7789999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhhHH
Q psy3624 722 GITGSDVSKQTADMILLDDNFASIVTGVEEGRLIFD 757 (1010)
Q Consensus 722 g~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~~~ 757 (1010)
. +|+..+||++.+|=+|.|...+.+.++.|+...-
T Consensus 535 N-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 535 N-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred c-cccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 9 9999999999999999999999999999987643
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.8e-35 Score=313.47 Aligned_cols=226 Identities=31% Similarity=0.531 Sum_probs=201.6
Q ss_pred hhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCc-eEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEE
Q psy3624 125 LVTVCIITGIFSYSQEAKSARIMDSFKNMVPQY-ANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVD 203 (1010)
Q Consensus 125 l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~-~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vd 203 (1010)
++++++++.++++++++|+++..++++++.+++ ++|+|||++++++++||+|||+|.|++||++||||++++.+.+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 456677788899999999999999999988887 9999999999999999999999999999999999999994457999
Q ss_pred eecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHHHHHHHH
Q psy3624 204 NSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHL 283 (1010)
Q Consensus 204 es~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~ 283 (1010)
||.+|||+.|+.|.+. +.+.+|++|+||.+.+|+++++|++||.+|..|++.+.....+.+++++++.++++..+
T Consensus 82 ~s~ltGes~pv~k~~~-----~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00122_consen 82 ESALTGESEPVKKTPL-----PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKI 156 (230)
T ss_dssp CHHHHSBSSEEEESSS-----CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHH
T ss_pred cccccccccccccccc-----cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHH
Confidence 9999999999999865 45567889999999999999999999999999999999888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHHhhcccceecchhhhhh
Q psy3624 284 ISAWAIFLGVTFFFLSFA--LGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVET 355 (1010)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~ 355 (1010)
+..+.++++++.+++++. ...+|...+..+++++++++|++||+++++++..++++|+++|+++|+++++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 157 LIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred HHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 988888777777766665 556788899999999999999999999999999999999999999999999995
No 35
>KOG4383|consensus
Probab=99.96 E-value=5.9e-27 Score=255.13 Aligned_cols=500 Identities=13% Similarity=0.114 Sum_probs=297.4
Q ss_pred CChHHHHHhccccccCCccccCCHHhHHHHHHHHHHHHhccCcEEEEeeeccCCC-----------------C-------
Q psy3624 496 GAPERILDRCSTMKQGDKDVELDAKNRHEVEEILEQLGNYGERVLGFCDYALPPA-----------------K------- 551 (1010)
Q Consensus 496 Ga~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~a~~~l~~~-----------------~------- 551 (1010)
|-.+.+.+.|+.++++.+..|++...|.++.+.+.+-.-.|+ ++|||||+.... .
T Consensus 698 g~ad~~~eACTdfWdGadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~c 776 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETAC 776 (1354)
T ss_pred cHHHHHHHHhhhhcCCceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhhc
Confidence 556778899999999999999999999999999888777775 789999863210 0
Q ss_pred -CCCC--------CcCCCCCC-----------CCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHH
Q psy3624 552 -FPAG--------FELKSDPP-----------NFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTA 611 (1010)
Q Consensus 552 -~~~~--------~~~~~~~~-----------~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta 611 (1010)
.+.. ..+.+.+. ...-.+..|.|++....+.+++....|+.|.++.||++.+|-.+....
T Consensus 777 elp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkS 856 (1354)
T KOG4383|consen 777 ELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKS 856 (1354)
T ss_pred cCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHH
Confidence 0000 00000000 011256889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcccHHHHHhhcCCccccCC---------------------CCCcceeEEech-------hhhcC---
Q psy3624 612 KAIAKAVGIISEGSETLEDIAKRRRVPVSSLD---------------------PRESTTIVIQGS-------ILRDM--- 660 (1010)
Q Consensus 612 ~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~g~-------~~~~~--- 660 (1010)
+.+|.++||.....-.+ ...++.+.+..... .++.....+.-+ .++.+
T Consensus 857 kVFAEKlGiEaGWNCHI-SLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 857 KVFAEKLGIEAGWNCHI-SLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHhccccccceeE-EeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999986322111 11111111100000 000000000000 00111
Q ss_pred ----------------------CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCcc--CHHHhhhCC
Q psy3624 661 ----------------------TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVN--DSPALKKAD 716 (1010)
Q Consensus 661 ----------------------~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~N--D~~~l~~A~ 716 (1010)
.-++++++..... .|.+++|+...++++.+|++|++++++|...| ....+.+||
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~--LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkad 1013 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVG--LFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKAD 1013 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeee--eccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccc
Confidence 0111222222222 79999999999999999999999999999988 456678999
Q ss_pred ceEeeCCC------------CCH-HHHh-----------------hcCEEecCCCchhHHHHHHHhhhhHHhHHHHHHHH
Q psy3624 717 IGIAMGIT------------GSD-VSKQ-----------------TADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYT 766 (1010)
Q Consensus 717 vgIamg~~------------~~~-~ak~-----------------aAd~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~ 766 (1010)
++||+..- ++. ...+ ++|+.......-.+..+|+.+|+....+|+++.|.
T Consensus 1014 ISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFi 1093 (1354)
T KOG4383|consen 1014 ISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFI 1093 (1354)
T ss_pred eeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 99998410 000 1111 23444444445568889999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHhccCchhHHHHHHHHHHhhchHHHHH-hcccCCCcccccCCCCCCCCCCccchH---HHHHHHH
Q psy3624 767 LASNVPEITPFLMFIVIGIPLPLGVVAILCIDLGTDMWPAIS-LAYEKAESDIMRRHPRNPVTDKLVTGK---LLFVAYG 842 (1010)
Q Consensus 767 l~~n~~~~~~~~~~~~~~~~~pl~~~~il~~~l~~~~l~~~~-l~~~~~~~~~m~~~p~~~~~~~l~~~~---~~~~~~~ 842 (1010)
+...+...+.++++.++.+|..++-.+++|..++..++..++ |...++.+.+|.+...+ +...+..+. .....++
T Consensus 1094 Lq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~maagK-NlqeIPKk~kh~fllcFil 1172 (1354)
T KOG4383|consen 1094 LQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIMAAGK-NLQEIPKKEKHKFLLCFIL 1172 (1354)
T ss_pred HHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEeeccC-ChhhcccHHHHHHHHHHHH
Confidence 999998888899999999999999999999999998777776 44445555665554432 112222221 1122222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHHHH
Q psy3624 843 QIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLL 922 (1010)
Q Consensus 843 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~ 922 (1010)
++ .+.+..+.+.|.+++..+.-..-+ ++..+.. ..+....+.....|+.+.++... .+|...-..++...++..+
T Consensus 1173 kF-sls~ssclIcFgf~L~afcd~~~d-~n~~nC~--~~m~~S~ddqa~a~FedfangL~-saQkl~aa~iilH~ifiqI 1247 (1354)
T KOG4383|consen 1173 KF-SLSASSCLICFGFLLMAFCDLMCD-FNDINCL--FNMDGSADDQALAEFEDFANGLG-SAQKLLAAEIILHIIFIQI 1247 (1354)
T ss_pred Hh-hhhHHHHHHHHHHHHHHhhhhhcc-cccccee--eccCCCcCcccchhHHHHHhhhh-hHHHHHHHHHHHHhheeEE
Confidence 32 234445555555544321111000 0000000 01111122233345444433221 2344444445555555555
Q ss_pred HhhccCccccc-cCccChhHHHHH---------HHHHHHHHHHhccccccccccccccCchhHHHHHHHHHHHHHHHHHH
Q psy3624 923 ICKTRYNSLVH-QGMNNWVLNFGI---------VFETVAACIVSYCPGMDEILKTYPVRAEWWLPAVPFAIVIFIYDECR 992 (1010)
Q Consensus 923 ~~~~~~~~~~~-~~~~n~~~~~~i---------~~~~~~~~~~~~ip~l~~~f~~~~l~~~~wl~~l~~~~~~l~~~e~~ 992 (1010)
...++..+.++ .+..|.||-+.+ ...+.+++..-+-- +--|+....+..-|++..++..++.+.+|++
T Consensus 1248 Thih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~--~VHfgldd~pLL~~~igcisi~iiVitNEii 1325 (1354)
T KOG4383|consen 1248 THIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDR--GVHFGLDDFPLLPLGIGCISICIIVITNEII 1325 (1354)
T ss_pred EEEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhcccc--ceeeccccchhHHHHHHHHheeeeeehhhHH
Confidence 55555555544 445776665433 12222222211211 1235555566666777666666677789999
Q ss_pred HHHHhhCCCCccccc
Q psy3624 993 RFWLRTHPNGWVERE 1007 (1010)
Q Consensus 993 K~~~r~~~~~~~~~~ 1007 (1010)
|.-+-|.+.|.++|.
T Consensus 1326 KiheIR~~~R~QkRq 1340 (1354)
T KOG4383|consen 1326 KIHEIRQFTREQKRQ 1340 (1354)
T ss_pred HHHHHHHHHHHHHhh
Confidence 986655544555553
No 36
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.92 E-value=2.8e-24 Score=218.83 Aligned_cols=180 Identities=33% Similarity=0.572 Sum_probs=146.5
Q ss_pred CchhHHHHHHHHHHhhchHHHHHhcccCCCcccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3624 786 PLPLGVVAILCIDLGTDMWPAISLAYEKAESDIMRRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGW 865 (1010)
Q Consensus 786 ~~pl~~~~il~~~l~~~~l~~~~l~~~~~~~~~m~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 865 (1010)
|+|++++|+||+|+++|.+|++++++||||+++|+||||++ ++++++++++..+ ...|++++++++++|++.++..+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~-~~~l~~~~~~~~i-~~~g~~~~~~~~~~f~~~~~~~~~ 78 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDP-NEPLINKRLLRRI-LIQGLIMAAACFFAFFLGLYIFGW 78 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TT-TS-SSSHHHHHHH-CCHHHHHHHHHHHHHHHHHHSTCS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhcccccc-chhhccHHhHhHH-HHHHHHHHHHHHHHHHHHhhcccc
Confidence 78999999999999999999999999999999999999964 5899999998876 567999999999999887753322
Q ss_pred CCcccccccccccccccCcccccccccchhhhcccccchhhHHHHHHHHHHHHHHHHHhhccCccccc-cCc-cChhHHH
Q psy3624 866 MPDKLIGIRARWESCAINDLEDSYGQEWTYASRKILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVH-QGM-NNWVLNF 943 (1010)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~-~~~-~n~~~~~ 943 (1010)
.... .+....+++|++|.+++++|+++.+++|+++.+.|+ .++ +|++++.
T Consensus 79 ~~~~----------------------------~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~ 130 (182)
T PF00689_consen 79 DEET----------------------------NNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLI 130 (182)
T ss_dssp SSHH----------------------------HTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHH
T ss_pred cccc----------------------------chhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHH
Confidence 1100 000123689999999999999999999998888887 565 8999999
Q ss_pred HHHHHHHHHHHHhccccccccccccccCchhHHHHHHHHHHHHHHHHHHHHH
Q psy3624 944 GIVFETVAACIVSYCPGMDEILKTYPVRAEWWLPAVPFAIVIFIYDECRRFW 995 (1010)
Q Consensus 944 ~i~~~~~~~~~~~~ip~l~~~f~~~~l~~~~wl~~l~~~~~~l~~~e~~K~~ 995 (1010)
+++++++++++++|+|+++.+|++.++++.+|+.+++++++.++++|++|++
T Consensus 131 ~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 131 AILISIALQILIVYVPGLNRIFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHHHHHHHHHHHSTTHHHHST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchhhHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999999999999999999999999985
No 37
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.84 E-value=4.1e-21 Score=201.77 Aligned_cols=97 Identities=49% Similarity=0.755 Sum_probs=91.4
Q ss_pred CcEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcc
Q psy3624 569 GLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPREST 648 (1010)
Q Consensus 569 ~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (1010)
++.++|.+.+.|+++|+++++|++|+++|++++|+|||+..++..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 578999999999999999999999999999999999999999999999999943
Q ss_pred eeEEechhhhcCCHHHHHHHHhccCcEEEEec--ChhhH--HHHHHHHHHcCCeEEEEcCCccCHHHhhhCC
Q psy3624 649 TIVIQGSILRDMTTEQLENVLRTHREIVFART--SPTQK--LHIVEGCQRLGAIVAVTGDGVNDSPALKKAD 716 (1010)
Q Consensus 649 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~--~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~ 716 (1010)
..+|+++ +|++| .++++.++..++.|+|+|||.||++|+++||
T Consensus 169 -------------------------~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 -------------------------SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------------------------EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------------------------ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 2389999 99999 9999999977779999999999999999997
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.53 E-value=4.1e-14 Score=125.05 Aligned_cols=118 Identities=25% Similarity=0.324 Sum_probs=105.9
Q ss_pred cEEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcce
Q psy3624 570 LRFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTT 649 (1010)
Q Consensus 570 l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (1010)
+...+.++---++-++++++|++|++. ++++++|||...+....|+-.|++.+.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 456788888889999999999999999 999999999999999999999986532
Q ss_pred eEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeC--CCCCH
Q psy3624 650 IVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMG--ITGSD 727 (1010)
Q Consensus 650 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg--~~~~~ 727 (1010)
+|+...|+.|.++++.|++.++.|+|+|||.||.+||+.||+||+.= .+..+
T Consensus 73 --------------------------v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~ 126 (152)
T COG4087 73 --------------------------VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPE 126 (152)
T ss_pred --------------------------eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcch
Confidence 89999999999999999999999999999999999999999998762 25566
Q ss_pred HHHhhcCEEecC
Q psy3624 728 VSKQTADMILLD 739 (1010)
Q Consensus 728 ~ak~aAd~vl~~ 739 (1010)
.+.++||+++.+
T Consensus 127 r~l~~ADvvik~ 138 (152)
T COG4087 127 RLLLTADVVLKE 138 (152)
T ss_pred HHHhhchhhhhh
Confidence 778899999864
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.43 E-value=3.6e-13 Score=118.40 Aligned_cols=89 Identities=39% Similarity=0.658 Sum_probs=73.0
Q ss_pred hhcCCccccCChhhhhhhcccccCChhHHHHHHHHHHh--cCChHHHhhhcceeEeecCCCCCceEEEEEEeCCCeEEEE
Q psy3624 416 SLCNRAEFTPNQEKIQILKREVMGDASEAAILKFSELA--IGDVVEFRNRHKKALEIPFNSTDKYQVSIHIMPNNEYLLV 493 (1010)
Q Consensus 416 ~lc~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~--~~~~~~~~~~~~~~~~~~f~s~~k~~~~v~~~~~~~~~~~ 493 (1010)
+|||++.+..+.+... ....|||+|.||+.++... +.+....+..++++.++||||+||+|+++++ .++.++++
T Consensus 1 ~LCn~a~~~~~~~~~~---~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~ 76 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKT---EEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILY 76 (91)
T ss_pred CCccccEeecCCCCcc---ccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEE
Confidence 5799988754433211 2378999999999999988 4567888999999999999999999999998 33467789
Q ss_pred EeCChHHHHHhcccc
Q psy3624 494 MKGAPERILDRCSTM 508 (1010)
Q Consensus 494 ~KGa~e~il~~c~~~ 508 (1010)
+|||||.|+++|+++
T Consensus 77 ~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 77 VKGAPEVILDRCTHI 91 (91)
T ss_pred cCCChHHHHHhcCCC
Confidence 999999999999863
No 40
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.42 E-value=3.2e-13 Score=112.38 Aligned_cols=69 Identities=33% Similarity=0.552 Sum_probs=65.0
Q ss_pred ccCCCHHHHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3624 32 DHKLPLKDLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLC 100 (1010)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~ 100 (1010)
||..++++++++|++|...|||++||++|+++||+|+++++++.++|..++++|.++|.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 799999999999999999999999999999999999999889999999999999999999999888765
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.42 E-value=1.7e-12 Score=141.20 Aligned_cols=68 Identities=24% Similarity=0.291 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHH
Q psy3624 683 TQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEE 751 (1010)
Q Consensus 683 ~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~ 751 (1010)
..|...++.+.+. | +.|+++|||.||.+||+.|++||||| ||.+.+|++||+|+.+++.+|++++|++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 4799988888664 3 46999999999999999999999999 9999999999999999999999999864
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.39 E-value=2.7e-12 Score=139.13 Aligned_cols=170 Identities=22% Similarity=0.325 Sum_probs=111.5
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----Cc--------------------ccHHHHHhhc-
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISE----GS--------------------ETLEDIAKRR- 635 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~----~~--------------------~~~~~~~~~~- 635 (1010)
++++.++++|+++++.|++++++|||+...+..+.+++|+... +. ..+....++.
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 99 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQ 99 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhcc
Confidence 3999999999999999999999999999999999999999741 11 1111122121
Q ss_pred CCccccCCCCCcc------------------eeEEec-hhh-------hcCCHH---HHHHHH-hccC--cEEEEecC--
Q psy3624 636 RVPVSSLDPREST------------------TIVIQG-SIL-------RDMTTE---QLENVL-RTHR--EIVFARTS-- 681 (1010)
Q Consensus 636 ~~~~~~~~~~~~~------------------~~~~~g-~~~-------~~~~~~---~~~~~~-~~~~--~~v~~r~~-- 681 (1010)
......+...... ...... ... .....+ +....+ .... ...+.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~ 179 (264)
T COG0561 100 GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPI 179 (264)
T ss_pred CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCc
Confidence 1111111100000 000000 000 000111 111111 1111 12333333
Q ss_pred -----h--hhHHHHHHHHHH-cCC---eEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHH
Q psy3624 682 -----P--TQKLHIVEGCQR-LGA---IVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVE 750 (1010)
Q Consensus 682 -----p--~~K~~iv~~l~~-~g~---~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~ 750 (1010)
| .+|+..++.+.+ .|. .|+++||+.||.+||+.|+.||||| ||.+.+|+.||+++.+++.+||.++|+
T Consensus 180 ~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~ 258 (264)
T COG0561 180 SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALE 258 (264)
T ss_pred eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHH
Confidence 3 379999998866 454 4999999999999999999999999 999999999999999999999999997
Q ss_pred H
Q psy3624 751 E 751 (1010)
Q Consensus 751 ~ 751 (1010)
+
T Consensus 259 ~ 259 (264)
T COG0561 259 K 259 (264)
T ss_pred H
Confidence 5
No 43
>PRK10976 putative hydrolase; Provisional
Probab=99.38 E-value=3.8e-12 Score=138.12 Aligned_cols=171 Identities=18% Similarity=0.222 Sum_probs=109.0
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----Cc--------c-------------cHHHHHhh
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISE----GS--------E-------------TLEDIAKR 634 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~----~~--------~-------------~~~~~~~~ 634 (1010)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+... +. + .+.+..++
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 35899999999999999999999999999999999999998641 11 1 11111111
Q ss_pred c-CCccccCCCCCcc-----------------ee-EEechhh-----hc-----CCHHHHH---HHH-hccC-cE-----
Q psy3624 635 R-RVPVSSLDPREST-----------------TI-VIQGSIL-----RD-----MTTEQLE---NVL-RTHR-EI----- 675 (1010)
Q Consensus 635 ~-~~~~~~~~~~~~~-----------------~~-~~~g~~~-----~~-----~~~~~~~---~~~-~~~~-~~----- 675 (1010)
. +.....+..+..+ .. ...-..+ .. ...+... +.+ .... ..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 177 (266)
T PRK10976 98 NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFS 177 (266)
T ss_pred cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 1 1111111100000 00 0000000 00 0111111 111 1111 01
Q ss_pred --EEEecCh--hhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcC--EEecCCCchhH
Q psy3624 676 --VFARTSP--TQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTAD--MILLDDNFASI 745 (1010)
Q Consensus 676 --v~~r~~p--~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd--~vl~~~~~~~i 745 (1010)
-+....| ..|...++.+.+. | +.|+++||+.||.+||+.|++||||| ||.+.+|++|| +|+.+++.+|+
T Consensus 178 ~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGV 256 (266)
T PRK10976 178 TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAV 256 (266)
T ss_pred CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHH
Confidence 1233344 3699999888653 4 46999999999999999999999999 99999999988 78889999999
Q ss_pred HHHHHH
Q psy3624 746 VTGVEE 751 (1010)
Q Consensus 746 ~~~i~~ 751 (1010)
+++|++
T Consensus 257 a~~l~~ 262 (266)
T PRK10976 257 PHYLRK 262 (266)
T ss_pred HHHHHH
Confidence 999864
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.38 E-value=4.8e-12 Score=134.25 Aligned_cols=166 Identities=22% Similarity=0.281 Sum_probs=109.7
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----Cccc-----------------H---HHHHhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISE----GSET-----------------L---EDIAKRRR 636 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~----~~~~-----------------~---~~~~~~~~ 636 (1010)
.+.+.+.++|++++++|++++++|||+...+..+++++|+... +... . .+...+..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 4889999999999999999999999999999999999998631 1100 0 01111100
Q ss_pred Ccc-ccCC-CCC---cceeEEechhhhcCCHHHHHHHHhccC-cE------EEEecChh--hHHHHHHHHHHc-C---Ce
Q psy3624 637 VPV-SSLD-PRE---STTIVIQGSILRDMTTEQLENVLRTHR-EI------VFARTSPT--QKLHIVEGCQRL-G---AI 698 (1010)
Q Consensus 637 ~~~-~~~~-~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------v~~r~~p~--~K~~iv~~l~~~-g---~~ 698 (1010)
... ..+. ... .....+. .....+++...+.+.. .. .+....|. .|...++.+.++ | ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~ 175 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALR----RTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEE 175 (230)
T ss_pred cccceeeecCCcccccceeeec----ccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHH
Confidence 000 0000 000 0000100 0111233333333221 11 12234443 489888888654 3 46
Q ss_pred EEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHH
Q psy3624 699 VAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEE 751 (1010)
Q Consensus 699 v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~ 751 (1010)
++++||+.||.+|++.|++|+||| |+.+.+|++||+|+.+++.+|++++|++
T Consensus 176 ~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 176 VAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred EEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999864
No 45
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.37 E-value=2.2e-12 Score=140.36 Aligned_cols=171 Identities=15% Similarity=0.104 Sum_probs=110.2
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----Cc---------------------ccHHHHHhh
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISE----GS---------------------ETLEDIAKR 634 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~----~~---------------------~~~~~~~~~ 634 (1010)
..+.+.++++|++++++|++++++|||+...+..+.+++|+... +. ..+.+...+
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 36999999999999999999999999999999999999998631 11 011111222
Q ss_pred cCCccccCCCCCcc-----------------eeEE-echhhh---------cCCHHHHH---HHHh-ccC-cEE------
Q psy3624 635 RRVPVSSLDPREST-----------------TIVI-QGSILR---------DMTTEQLE---NVLR-THR-EIV------ 676 (1010)
Q Consensus 635 ~~~~~~~~~~~~~~-----------------~~~~-~g~~~~---------~~~~~~~~---~~~~-~~~-~~v------ 676 (1010)
.+.....+..+..+ .... .-..+. ....+.+. ..+. ... ..-
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 22211111100000 0000 000000 00111211 1111 111 111
Q ss_pred -EEecChh--hHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCE--EecCCCchhHHH
Q psy3624 677 -FARTSPT--QKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADM--ILLDDNFASIVT 747 (1010)
Q Consensus 677 -~~r~~p~--~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~--vl~~~~~~~i~~ 747 (1010)
+...+|. .|...++.+.+. | +.|+++|||.||++||+.|+.||||| ||.+.+|++||+ |+.+++.+|+++
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHH
Confidence 2234443 699999998664 4 46999999999999999999999999 999999999996 778999999999
Q ss_pred HHHH
Q psy3624 748 GVEE 751 (1010)
Q Consensus 748 ~i~~ 751 (1010)
+|++
T Consensus 257 ~l~~ 260 (272)
T PRK15126 257 YLTH 260 (272)
T ss_pred HHHH
Confidence 9853
No 46
>PLN02887 hydrolase family protein
Probab=99.31 E-value=1.9e-11 Score=142.95 Aligned_cols=67 Identities=25% Similarity=0.364 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHH
Q psy3624 684 QKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEE 751 (1010)
Q Consensus 684 ~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~ 751 (1010)
+|+..++.+.+. | +.|++||||.||++||+.|++||||| ||.+.+|++||+|+.+++.+||+++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 688888888664 3 46999999999999999999999999 9999999999999999999999999864
No 47
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.29 E-value=2.2e-11 Score=127.43 Aligned_cols=165 Identities=21% Similarity=0.262 Sum_probs=107.1
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----CcccHHH--------------HHh---hcCCcc
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISE----GSETLED--------------IAK---RRRVPV 639 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~----~~~~~~~--------------~~~---~~~~~~ 639 (1010)
++.+.+.++|++|+++|++++++|||+...+..+++++++... +...+.. ... ......
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 5899999999999999999999999999999999999998641 1100000 000 000000
Q ss_pred ccCCCC-CcceeEEechhhhcCCHHHHHHHHhccCc-E----EEEecC--hhhHHHHHHHHHHc-C---CeEEEEcCCcc
Q psy3624 640 SSLDPR-ESTTIVIQGSILRDMTTEQLENVLRTHRE-I----VFARTS--PTQKLHIVEGCQRL-G---AIVAVTGDGVN 707 (1010)
Q Consensus 640 ~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----v~~r~~--p~~K~~iv~~l~~~-g---~~v~~iGDg~N 707 (1010)
...... ......+.. .....+.+...+....- . .+...+ ..+|...++.+.+. | ..++++||+.|
T Consensus 98 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~N 174 (215)
T TIGR01487 98 DRLSNEYPRASLVIMR---EGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEN 174 (215)
T ss_pred hhcccccceeEEEEec---CCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 000000 000000000 01112233333322211 0 122333 35899999988663 3 35999999999
Q ss_pred CHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHH
Q psy3624 708 DSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGV 749 (1010)
Q Consensus 708 D~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i 749 (1010)
|.+|++.|++|+||+ |+.+.+|+.||+|+.+++.+|+.++|
T Consensus 175 D~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 175 DIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999999 99999999999999999999998764
No 48
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.29 E-value=2.9e-11 Score=131.90 Aligned_cols=68 Identities=29% Similarity=0.381 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHH-cC---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHH
Q psy3624 683 TQKLHIVEGCQR-LG---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEE 751 (1010)
Q Consensus 683 ~~K~~iv~~l~~-~g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~ 751 (1010)
..|...++.+.+ .| +.|+++||+.||.+|++.|++|+||| |+.+.+|+.||+|+.+++.+||+++|++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 368888877654 34 46999999999999999999999999 9999999999999999999999999864
No 49
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.28 E-value=5.1e-11 Score=125.90 Aligned_cols=165 Identities=22% Similarity=0.295 Sum_probs=106.8
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----CcccHH-------------------HHHhhcCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISE----GSETLE-------------------DIAKRRRV 637 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~----~~~~~~-------------------~~~~~~~~ 637 (1010)
.+.+.+.++|++++++|++++++|||+...+..+++++|+... +...+. ........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 5889999999999999999999999999999999999996431 100000 00000000
Q ss_pred ccccCC---CCCcceeEEechhhhcCCHHHHHHHHhccCcE-------EEEecCh--hhHHHHHHHHHHc-C---CeEEE
Q psy3624 638 PVSSLD---PRESTTIVIQGSILRDMTTEQLENVLRTHREI-------VFARTSP--TQKLHIVEGCQRL-G---AIVAV 701 (1010)
Q Consensus 638 ~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------v~~r~~p--~~K~~iv~~l~~~-g---~~v~~ 701 (1010)
...... ........+. .....+....+..+.... .+....| ..|...++.+.+. | +.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~ 170 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMR----YGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLV 170 (225)
T ss_pred chhhhccccccccceEEEe----ecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE
Confidence 000000 0000000110 001122223233222110 1223333 4799888887653 3 46999
Q ss_pred EcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchh----HHHHHH
Q psy3624 702 TGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFAS----IVTGVE 750 (1010)
Q Consensus 702 iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~----i~~~i~ 750 (1010)
+||+.||.+|++.|++|+||+ |+.+.+|+.||+|+.+++.+| +.++++
T Consensus 171 ~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 171 CGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred ECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999999 777664
No 50
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.22 E-value=8e-11 Score=126.81 Aligned_cols=170 Identities=21% Similarity=0.237 Sum_probs=110.8
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------Cc-------------ccHHHHHh
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISE------------GS-------------ETLEDIAK 633 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~------------~~-------------~~~~~~~~ 633 (1010)
...+.+++.++|++++++|++++++|||+...+..+.+++++... .. ..+.+...
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 346889999999999999999999999999999999999998731 00 12223333
Q ss_pred hcCCccccCCCCCcce-------------------eEEec-hhh---------hcCCHHHHHHH----HhccCc-EE---
Q psy3624 634 RRRVPVSSLDPRESTT-------------------IVIQG-SIL---------RDMTTEQLENV----LRTHRE-IV--- 676 (1010)
Q Consensus 634 ~~~~~~~~~~~~~~~~-------------------~~~~g-~~~---------~~~~~~~~~~~----~~~~~~-~v--- 676 (1010)
..+.....+..+..+. ....- ... .....+....+ ...... ..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 3333222221111000 00000 000 00112222211 111111 01
Q ss_pred ----EEecCh--hhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHH
Q psy3624 677 ----FARTSP--TQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIV 746 (1010)
Q Consensus 677 ----~~r~~p--~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~ 746 (1010)
+...+| ..|...++.+.+. | +.++++||+.||.+||+.|+.|+||+ |+.+.+|+.||+++.+++.+||+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 122333 5799999888653 3 57999999999999999999999999 99999999999999988889999
Q ss_pred HHH
Q psy3624 747 TGV 749 (1010)
Q Consensus 747 ~~i 749 (1010)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 875
No 51
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.15 E-value=2.4e-10 Score=123.26 Aligned_cols=169 Identities=24% Similarity=0.324 Sum_probs=108.8
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----Cc---------------------ccHHHHHhh
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISE----GS---------------------ETLEDIAKR 634 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~----~~---------------------~~~~~~~~~ 634 (1010)
.++.+++.++|++++++|++++++|||+...+..+.+++|+... +. ..+.+..++
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999999999998631 00 111222222
Q ss_pred cCCccccCCCCCcc-------------------e-eEEec-----hhhh----cCCHHH---HHHHHhc--c-CcEE---
Q psy3624 635 RRVPVSSLDPREST-------------------T-IVIQG-----SILR----DMTTEQ---LENVLRT--H-REIV--- 676 (1010)
Q Consensus 635 ~~~~~~~~~~~~~~-------------------~-~~~~g-----~~~~----~~~~~~---~~~~~~~--~-~~~v--- 676 (1010)
.+.....+.....+ . .+... .... ....+. +.+.+.. . ...-
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 22211111100000 0 00000 0000 001111 2222221 0 1111
Q ss_pred ----EEecCh--hhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHH
Q psy3624 677 ----FARTSP--TQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIV 746 (1010)
Q Consensus 677 ----~~r~~p--~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~ 746 (1010)
+....| ..|...++.+.+. | +.++++||+.||++|++.|++|+||+ |+.+.+|+.||+++.+++.+||+
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~ 253 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVA 253 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchh
Confidence 223344 3699999988764 3 46999999999999999999999999 99999999999999999999998
Q ss_pred HHH
Q psy3624 747 TGV 749 (1010)
Q Consensus 747 ~~i 749 (1010)
++|
T Consensus 254 ~~l 256 (256)
T TIGR00099 254 LAL 256 (256)
T ss_pred hhC
Confidence 753
No 52
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.08 E-value=2.5e-10 Score=93.57 Aligned_cols=61 Identities=38% Similarity=0.527 Sum_probs=55.7
Q ss_pred HhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy3624 43 RYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKHLFEGFSVLLWTGAVLCFIA 103 (1010)
Q Consensus 43 ~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~f~~~l~~~~~~~~~~ 103 (1010)
.+++|+..|||++|+++|+++||+|+++++++.++|..++++|++++.++++++++++++.
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4678877899999999999999999999988899999999999999999999998888754
No 53
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.07 E-value=9.9e-10 Score=119.23 Aligned_cols=164 Identities=13% Similarity=0.165 Sum_probs=103.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC-----CCcccH---------------------------
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIIS-----EGSETL--------------------------- 628 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~-----~~~~~~--------------------------- 628 (1010)
.+.+.++++|++|+++|++++++|||+...+..+++++|+.. .+...+
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 467889999999999999999999999999999999999842 111100
Q ss_pred HHHHhhc-CCccccCCCCC-----------------------cceeEEechhhhcCCHHH---HHHHHhccCcEE-----
Q psy3624 629 EDIAKRR-RVPVSSLDPRE-----------------------STTIVIQGSILRDMTTEQ---LENVLRTHREIV----- 676 (1010)
Q Consensus 629 ~~~~~~~-~~~~~~~~~~~-----------------------~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~v----- 676 (1010)
.+..++. +.....+.... ........ ..+. +.+.+......+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~ 177 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRD------SDERMAQFTARLAELGLQFVQGAR 177 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecC------CHHHHHHHHHHHHHCCCEEEecCe
Confidence 1111111 21111110000 00000100 1111 222222111001
Q ss_pred EEecCh--hhHHHHHHHHHH-------cCCeEEEEcCCccCHHHhhhCCceEeeCCCCC-HH-----HHhhcCEEecCCC
Q psy3624 677 FARTSP--TQKLHIVEGCQR-------LGAIVAVTGDGVNDSPALKKADIGIAMGITGS-DV-----SKQTADMILLDDN 741 (1010)
Q Consensus 677 ~~r~~p--~~K~~iv~~l~~-------~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~-~~-----ak~aAd~vl~~~~ 741 (1010)
+....| .+|...++.+.+ ....|+++|||.||++||+.|++||||| |+. +. .+..||+++...+
T Consensus 178 ~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 178 FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCC
Confidence 223444 478888888755 2357999999999999999999999999 555 32 4558999999999
Q ss_pred chhHHHHHHH
Q psy3624 742 FASIVTGVEE 751 (1010)
Q Consensus 742 ~~~i~~~i~~ 751 (1010)
.+|+.+++++
T Consensus 257 ~~g~~~~l~~ 266 (271)
T PRK03669 257 PEGWREGLDH 266 (271)
T ss_pred cHHHHHHHHH
Confidence 9999998864
No 54
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.06 E-value=1.8e-09 Score=116.28 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHc------CCeEEEEcCCccCHHHhhhCCceEeeCCCCC---HHHHhh--c-CEEecCCCchhHHHHHH
Q psy3624 683 TQKLHIVEGCQRL------GAIVAVTGDGVNDSPALKKADIGIAMGITGS---DVSKQT--A-DMILLDDNFASIVTGVE 750 (1010)
Q Consensus 683 ~~K~~iv~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~---~~ak~a--A-d~vl~~~~~~~i~~~i~ 750 (1010)
..|...++.+.+. .+.++++||+.||.+||+.|++||||+ |+. +.+|+. | ++|+.+++.+|++++++
T Consensus 175 ~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 175 SDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 4688887777542 456999999999999999999999999 887 478887 4 59999999999999986
Q ss_pred H
Q psy3624 751 E 751 (1010)
Q Consensus 751 ~ 751 (1010)
+
T Consensus 254 ~ 254 (256)
T TIGR01486 254 H 254 (256)
T ss_pred H
Confidence 4
No 55
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.05 E-value=1e-09 Score=112.61 Aligned_cols=131 Identities=15% Similarity=0.147 Sum_probs=101.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.|+.+++.| +++++||-....+..+++++|+..--...+ .. ... -.++|..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l-----------~~-~~~----g~~tG~~---- 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKL-----------EI-DDS----DRVVGYQ---- 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceee-----------EE-ecC----CeeECee----
Confidence 68999999999999985 999999999999999999999953100000 00 000 0111110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCC
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDD 740 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~ 740 (1010)
+ ..++.|.+.++.+++.|..++++|||.||.+|++.||+||++ ++.+.++++||-.-.-.
T Consensus 127 ---------------~---~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~--~ak~~~~~~~~~~~~~~ 186 (203)
T TIGR02137 127 ---------------L---RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF--HAPENVIREFPQFPAVH 186 (203)
T ss_pred ---------------e---cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEe--cCCHHHHHhCCCCCccc
Confidence 1 346789999999988888899999999999999999999999 68899999888777666
Q ss_pred CchhHHHHHHHh
Q psy3624 741 NFASIVTGVEEG 752 (1010)
Q Consensus 741 ~~~~i~~~i~~g 752 (1010)
+.+.+..++.++
T Consensus 187 ~~~~~~~~~~~~ 198 (203)
T TIGR02137 187 TYEDLKREFLKA 198 (203)
T ss_pred CHHHHHHHHHHH
Confidence 788888877765
No 56
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.05 E-value=7.8e-10 Score=109.11 Aligned_cols=106 Identities=18% Similarity=0.199 Sum_probs=84.9
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHH
Q psy3624 588 DAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLEN 667 (1010)
Q Consensus 588 ~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 667 (1010)
.+|+.|+++|+++.++|+.+...+....+.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999953
Q ss_pred HHhccCcEEEEec--ChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhH
Q psy3624 668 VLRTHREIVFART--SPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASI 745 (1010)
Q Consensus 668 ~~~~~~~~v~~r~--~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i 745 (1010)
+|... .|+....+++.++-..+.++++||+.||.+|++.|++++||+ |+.+.+++.|++|+.+++-++.
T Consensus 76 --------~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 76 --------FHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred --------EEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 22222 233333333433333357999999999999999999999999 9999999999999987776665
Q ss_pred HH
Q psy3624 746 VT 747 (1010)
Q Consensus 746 ~~ 747 (1010)
+.
T Consensus 147 v~ 148 (169)
T TIGR02726 147 VR 148 (169)
T ss_pred HH
Confidence 43
No 57
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.03 E-value=1.2e-09 Score=119.61 Aligned_cols=131 Identities=19% Similarity=0.289 Sum_probs=99.4
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..--...+ .. ..-.++|.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~l-----------ei------~dg~ltg~----- 238 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANEL-----------EI------MDGKLTGN----- 238 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEE-----------EE------ECCEEEeE-----
Confidence 589999999999999999999999999888889999999853100000 00 00001111
Q ss_pred CHHHHHHHHhccCcEEEE-ecChhhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCE
Q psy3624 661 TTEQLENVLRTHREIVFA-RTSPTQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADM 735 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~-r~~p~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~ 735 (1010)
+.. -+..+.|.+.++.+.++ | +.|+++|||.||.+|++.||+|||| |+.+.+++.||+
T Consensus 239 ---------------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~ 301 (322)
T PRK11133 239 ---------------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQV 301 (322)
T ss_pred ---------------ecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCE
Confidence 000 02345788888887653 3 5799999999999999999999999 899999999999
Q ss_pred EecCCCchhHHHHHH
Q psy3624 736 ILLDDNFASIVTGVE 750 (1010)
Q Consensus 736 vl~~~~~~~i~~~i~ 750 (1010)
++..++++++..++-
T Consensus 302 ~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 302 TIRHADLMGVLCILS 316 (322)
T ss_pred EecCcCHHHHHHHhc
Confidence 999999999987663
No 58
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.95 E-value=4.9e-09 Score=113.94 Aligned_cols=67 Identities=18% Similarity=0.168 Sum_probs=57.8
Q ss_pred hHHHHHHHHHH----cC-CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHH----hhc-CEEe--cCCCchhHHHHHHH
Q psy3624 684 QKLHIVEGCQR----LG-AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSK----QTA-DMIL--LDDNFASIVTGVEE 751 (1010)
Q Consensus 684 ~K~~iv~~l~~----~g-~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak----~aA-d~vl--~~~~~~~i~~~i~~ 751 (1010)
.|...++.+.+ .. +.|+++||+.||++|++.|++|+||+ ||.+.+| ++| +.++ ..++.+|+++++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 78888877754 34 78999999999999999999999999 9999999 776 7777 57779999998863
No 59
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.93 E-value=5.8e-09 Score=102.38 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=85.6
Q ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHHH
Q psy3624 589 AVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLENV 668 (1010)
Q Consensus 589 aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 668 (1010)
+|++|++.|+++.++||++...+..+++++|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999853
Q ss_pred HhccCcEEEEecChhhHHHHHHHHH-H---cCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchh
Q psy3624 669 LRTHREIVFARTSPTQKLHIVEGCQ-R---LGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFAS 744 (1010)
Q Consensus 669 ~~~~~~~v~~r~~p~~K~~iv~~l~-~---~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~ 744 (1010)
.|... ..|.+.++.+. + ..+.++++||+.||.+|++.|+++++|. ++.+..+..|++++.++.-+|
T Consensus 70 -------~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g 139 (154)
T TIGR01670 70 -------LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRG 139 (154)
T ss_pred -------EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCc
Confidence 12111 23454454443 2 2357999999999999999999999999 899999999999998776555
Q ss_pred -HHHHHH
Q psy3624 745 -IVTGVE 750 (1010)
Q Consensus 745 -i~~~i~ 750 (1010)
++++++
T Consensus 140 ~~~~~~~ 146 (154)
T TIGR01670 140 AVREVCE 146 (154)
T ss_pred HHHHHHH
Confidence 776654
No 60
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.90 E-value=1.1e-08 Score=108.70 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcC----EEecCCCchhHHHHHHH
Q psy3624 683 TQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTAD----MILLDDNFASIVTGVEE 751 (1010)
Q Consensus 683 ~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd----~vl~~~~~~~i~~~i~~ 751 (1010)
..|...++.+.++ | ..++++||+.||.+|++.+++||+|+ |+.+.+|+.|+ +|+.+++.+|++++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3799999998663 3 35999999999999999999999999 99999999999 88888899999999864
No 61
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.79 E-value=3.8e-08 Score=101.37 Aligned_cols=122 Identities=24% Similarity=0.311 Sum_probs=91.1
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
.++.|++.+.++.++++|.+++++||-...-+..+|+++|++..-...+. ..+ . .++|.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~--------------~~d--G-~ltG~---- 134 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELE--------------IDD--G-KLTGR---- 134 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEE--------------EeC--C-EEece----
Confidence 57999999999999999999999999999999999999999752111000 000 0 12221
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH-cCC---eEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCE
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR-LGA---IVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADM 735 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~-~g~---~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~ 735 (1010)
++--.+..+.|.+.++.+.+ .|. .+.++|||.||.|||+.||.++|+ |+.+..++.|+.
T Consensus 135 ---------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~--n~~~~l~~~a~~ 197 (212)
T COG0560 135 ---------------VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV--NPKPKLRALADV 197 (212)
T ss_pred ---------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe--CcCHHHHHHHHH
Confidence 12233455789988866654 454 599999999999999999999998 677888887776
Q ss_pred EecC
Q psy3624 736 ILLD 739 (1010)
Q Consensus 736 vl~~ 739 (1010)
....
T Consensus 198 ~~~~ 201 (212)
T COG0560 198 RIWP 201 (212)
T ss_pred hcCh
Confidence 6543
No 62
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.77 E-value=3.8e-08 Score=103.42 Aligned_cols=129 Identities=20% Similarity=0.290 Sum_probs=93.1
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+..-.... ... + + -.++|.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~-----------~~~-~-~----~~~~~~----- 142 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANR-----------LEV-E-D----GKLTGL----- 142 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeE-----------EEE-E-C----CEEEEE-----
Confidence 58999999999999999999999999999999999999985310000 000 0 0 000000
Q ss_pred CHHHHHHHHhccCcEEEEe-cChhhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCE
Q psy3624 661 TTEQLENVLRTHREIVFAR-TSPTQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADM 735 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r-~~p~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~ 735 (1010)
+..+ ..+..|.++++.+.+. + +.++++||+.||++|.+.||+++++ ++.+..+++||+
T Consensus 143 ---------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~--~~~~~~~~~a~~ 205 (219)
T TIGR00338 143 ---------------VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF--NAKPKLQQKADI 205 (219)
T ss_pred ---------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe--CCCHHHHHhchh
Confidence 0111 1123467777665443 3 3589999999999999999999998 478889999999
Q ss_pred EecCCCchhHHHH
Q psy3624 736 ILLDDNFASIVTG 748 (1010)
Q Consensus 736 vl~~~~~~~i~~~ 748 (1010)
++.++++..+...
T Consensus 206 ~i~~~~~~~~~~~ 218 (219)
T TIGR00338 206 CINKKDLTDILPL 218 (219)
T ss_pred ccCCCCHHHHHhh
Confidence 9999988776543
No 63
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.71 E-value=1.7e-07 Score=100.48 Aligned_cols=171 Identities=12% Similarity=0.152 Sum_probs=106.9
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCC------cccHH------------HHH--------
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEG------SETLE------------DIA-------- 632 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~------~~~~~------------~~~-------- 632 (1010)
..+..|...++++++++.|+.++++|||+...++.+.+++++..+. ...+. ...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3567899999999999999999999999999999999999976531 11000 000
Q ss_pred --h-hcCCc-cccC--CCCCcceeEE-echhh-hcCCHHHHHHHHhcc--C-cEEE-----EecCh--hhHHHHHHHHHH
Q psy3624 633 --K-RRRVP-VSSL--DPRESTTIVI-QGSIL-RDMTTEQLENVLRTH--R-EIVF-----ARTSP--TQKLHIVEGCQR 694 (1010)
Q Consensus 633 --~-~~~~~-~~~~--~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~--~-~~v~-----~r~~p--~~K~~iv~~l~~ 694 (1010)
. ..... .... .....+...+ ...+- .. ...++...+.+. + ..+. ....| ..|...++.+.+
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~ 177 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPE-VIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQ 177 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhH-HHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHH
Confidence 0 00000 0000 0011111111 11110 00 012222222211 1 1111 13343 479999998866
Q ss_pred c----CCeEEEEcCCccCHHHhhh-CCceEeeCCCCCHHHHhhcC-------EEecCCCchhHHHHHHH
Q psy3624 695 L----GAIVAVTGDGVNDSPALKK-ADIGIAMGITGSDVSKQTAD-------MILLDDNFASIVTGVEE 751 (1010)
Q Consensus 695 ~----g~~v~~iGDg~ND~~~l~~-A~vgIamg~~~~~~ak~aAd-------~vl~~~~~~~i~~~i~~ 751 (1010)
. ...|+++||+.||++|++. ++.||||+ |+.+.+|+.++ ++.....-+|+.+++++
T Consensus 178 ~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 178 KLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred HcCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 3 3579999999999999998 67999999 99999997654 77777788999998864
No 64
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.70 E-value=6.9e-08 Score=97.76 Aligned_cols=102 Identities=20% Similarity=0.286 Sum_probs=82.3
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHH
Q psy3624 588 DAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLEN 667 (1010)
Q Consensus 588 ~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 667 (1010)
.+|+.|+++|+++.++||++...+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999999853
Q ss_pred HHhccCcEEEEecChhhHHHHHHHH-HHcC---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCch
Q psy3624 668 VLRTHREIVFARTSPTQKLHIVEGC-QRLG---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFA 743 (1010)
Q Consensus 668 ~~~~~~~~v~~r~~p~~K~~iv~~l-~~~g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~ 743 (1010)
+|. ..+.|...++.+ ++.| ..|+++||+.||++|++.|+++++++ ++.+..+..||+++..+.-+
T Consensus 90 --------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~ 158 (183)
T PRK09484 90 --------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGR 158 (183)
T ss_pred --------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCC
Confidence 222 123455555554 3333 46999999999999999999999998 88899999999999765544
Q ss_pred hH
Q psy3624 744 SI 745 (1010)
Q Consensus 744 ~i 745 (1010)
+.
T Consensus 159 g~ 160 (183)
T PRK09484 159 GA 160 (183)
T ss_pred CH
Confidence 44
No 65
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.67 E-value=1.2e-07 Score=87.86 Aligned_cols=116 Identities=22% Similarity=0.305 Sum_probs=92.7
Q ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHHHH
Q psy3624 588 DAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQLEN 667 (1010)
Q Consensus 588 ~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 667 (1010)
..|+.+++.||++.++|||+...++.=|+++||..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 48999999999999999999999999999999953
Q ss_pred HHhccCcEEEEecChhhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCch
Q psy3624 668 VLRTHREIVFARTSPTQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFA 743 (1010)
Q Consensus 668 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~ 743 (1010)
+|-. -++|....+.+.++ + +.|+++||..||.|+|++.+.++|+. ++.+..++.||+|+..+.-.
T Consensus 77 --------~~qG--~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~ 145 (170)
T COG1778 77 --------LYQG--ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGE 145 (170)
T ss_pred --------eeec--hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcc
Confidence 2211 24677777666443 2 46999999999999999999999999 99999999999999765533
Q ss_pred ----hHHHHHHHhhhhHHhH
Q psy3624 744 ----SIVTGVEEGRLIFDNL 759 (1010)
Q Consensus 744 ----~i~~~i~~gR~~~~~i 759 (1010)
.+.+.|..++..+.-.
T Consensus 146 GAvREv~dlil~aq~~~d~~ 165 (170)
T COG1778 146 GAVREVCDLILQAQGKLDEA 165 (170)
T ss_pred hHHHHHHHHHHHccCcHHHH
Confidence 3555666666554433
No 66
>PRK08238 hypothetical protein; Validated
Probab=98.65 E-value=9.2e-06 Score=93.99 Aligned_cols=93 Identities=22% Similarity=0.298 Sum_probs=71.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
|++|++.+.+++++++|++++++|+.+...+..+++.+|+.+. ++.+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~---------------------------Vigsd~---- 120 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG---------------------------VFASDG---- 120 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE---------------------------EEeCCC----
Confidence 5789999999999999999999999999999999999998321 222111
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCe-EEEEcCCccCHHHhhhCCceEeeC
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAI-VAVTGDGVNDSPALKKADIGIAMG 722 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~-v~~iGDg~ND~~~l~~A~vgIamg 722 (1010)
..++.|+.|.+.++. ..++. +.++||+.||.+|++.|+-+++++
T Consensus 121 ----------------~~~~kg~~K~~~l~~--~l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 121 ----------------TTNLKGAAKAAALVE--AFGERGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred ----------------ccccCCchHHHHHHH--HhCccCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 013456667665442 22322 678899999999999999999996
No 67
>PLN02382 probable sucrose-phosphatase
Probab=98.64 E-value=3.1e-07 Score=104.68 Aligned_cols=169 Identities=14% Similarity=0.152 Sum_probs=102.1
Q ss_pred CCCcchHHHH-HHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCc------c------------cHHHHHh--------
Q psy3624 581 PPRPAVPDAV-AKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGS------E------------TLEDIAK-------- 633 (1010)
Q Consensus 581 ~l~~~~~~aI-~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~------~------------~~~~~~~-------- 633 (1010)
.+.+...+++ +++++.|+.++++|||++.....+.++.++..+.. . .......
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3444455666 88999999999999999999999999999876521 0 0000000
Q ss_pred ---hcCCcc---ccCCCCCcceeEEechh--hhcCCHHHHHHHHhcc--C-cE-----EEEecChh--hHHHHHHHHHHc
Q psy3624 634 ---RRRVPV---SSLDPRESTTIVIQGSI--LRDMTTEQLENVLRTH--R-EI-----VFARTSPT--QKLHIVEGCQRL 695 (1010)
Q Consensus 634 ---~~~~~~---~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~--~-~~-----v~~r~~p~--~K~~iv~~l~~~ 695 (1010)
-...+. ..........+.+.... ... ..+.+.+.+... . .+ -+....|. .|...++.+.++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 000100 00001111122221111 111 011222222111 1 11 13344553 699999998664
Q ss_pred ----C---CeEEEEcCCccCHHHhhhCC-ceEeeCCCCCHHHHhhc--------CEEec-CCCchhHHHHHHH
Q psy3624 696 ----G---AIVAVTGDGVNDSPALKKAD-IGIAMGITGSDVSKQTA--------DMILL-DDNFASIVTGVEE 751 (1010)
Q Consensus 696 ----g---~~v~~iGDg~ND~~~l~~A~-vgIamg~~~~~~ak~aA--------d~vl~-~~~~~~i~~~i~~ 751 (1010)
| ..++++||+.||.+||+.|+ .||||| |+.+.+|+.+ +++.. +++.+||.++|++
T Consensus 187 ~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 187 LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 3 46999999999999999999 799999 9999999753 44433 5678899999865
No 68
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.39 E-value=1.8e-06 Score=89.75 Aligned_cols=127 Identities=17% Similarity=0.278 Sum_probs=88.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+..--. ......+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~----------------------~~~~~~~~~---- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC----------------------HSLEVDEDG---- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc----------------------ceEEECCCC----
Confidence 4689999999999999 9999999999999999999999853100 000000000
Q ss_pred CHHHHHHHHhccCcEEEE--ecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEec
Q psy3624 661 TTEQLENVLRTHREIVFA--RTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILL 738 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~--r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~ 738 (1010)
.+.. ...|+.|...++.++..+..++|+|||.||.+|.+.|++|++.+ ...+.....+++.+
T Consensus 121 --------------~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~- 184 (205)
T PRK13582 121 --------------MITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPA- 184 (205)
T ss_pred --------------eEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccc-
Confidence 0100 12367888888888888889999999999999999999999886 44333344555522
Q ss_pred CCCchhHHHHHH
Q psy3624 739 DDNFASIVTGVE 750 (1010)
Q Consensus 739 ~~~~~~i~~~i~ 750 (1010)
-+++..+...++
T Consensus 185 ~~~~~el~~~l~ 196 (205)
T PRK13582 185 VHTYDELLAAID 196 (205)
T ss_pred cCCHHHHHHHHH
Confidence 134555554443
No 69
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.38 E-value=1.8e-06 Score=90.59 Aligned_cols=44 Identities=9% Similarity=0.203 Sum_probs=39.7
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIIS 622 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~ 622 (1010)
.+...+++.++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45567789999999999999999999999999999999999853
No 70
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.37 E-value=1.8e-06 Score=89.42 Aligned_cols=117 Identities=21% Similarity=0.190 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++|+.....+..+++.+|+..-- ...+...+....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~------------------------~~~~~~~~~g~~ 135 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY------------------------SNELVFDEKGFI 135 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE------------------------EEEEEEcCCCeE
Confidence 58999999999999999999999999999999999999974310 000000000000
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHc-C---CeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcC
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRL-G---AIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTAD 734 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd 734 (1010)
. +. .+....|..|.++++.+.+. | +.++++||+.||++|++.||++++++ ......+.++|
T Consensus 136 ~-----------p~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 136 Q-----------PD-GIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred e-----------cc-eeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 0 00 11223456687777766443 3 45999999999999999999999997 44444444444
No 71
>KOG1615|consensus
Probab=98.33 E-value=1e-06 Score=84.65 Aligned_cols=110 Identities=18% Similarity=0.227 Sum_probs=76.9
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
.+.|++++.++.|++.|.++.++||--..-+..+|.++||+..+.-.. ... . -.+|+-...-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN-----~l~----f---------d~~Gk~~gfd 149 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYAN-----ELL----F---------DKDGKYLGFD 149 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhh-----eee----e---------ccCCcccccc
Confidence 478999999999999999999999999999999999999976432100 000 0 0000000000
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHc--CCeEEEEcCCccCHHHhhhCCceEeeC
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRL--GAIVAVTGDGVNDSPALKKADIGIAMG 722 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIamg 722 (1010)
. --.-+....|.++++.+++. .+.++|+|||.||.+|+..|+.=++.|
T Consensus 150 ---------~-----~~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 150 ---------T-----NEPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ---------c-----CCccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 0 00001224799999999873 357999999999999999988777665
No 72
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.17 E-value=2.2e-05 Score=92.08 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=37.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
...+.+.++|++|+++|+.++++|||+...+..+++++|+.
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 35568899999999999999999999999999999999974
No 73
>PTZ00174 phosphomannomutase; Provisional
Probab=98.14 E-value=6.7e-06 Score=87.83 Aligned_cols=54 Identities=20% Similarity=0.180 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHcCCeEEEEcC----CccCHHHhhhC-CceEeeCCCCCHHHHhhcCEEe
Q psy3624 683 TQKLHIVEGCQRLGAIVAVTGD----GVNDSPALKKA-DIGIAMGITGSDVSKQTADMIL 737 (1010)
Q Consensus 683 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~~l~~A-~vgIamg~~~~~~ak~aAd~vl 737 (1010)
.+|+..++.+.++.+.|+++|| |.||.+||+.| -.|++++ |+.+.+|..|.++.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4799999999888889999999 99999999976 5677778 99999998876543
No 74
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.11 E-value=1.7e-05 Score=85.34 Aligned_cols=160 Identities=13% Similarity=0.195 Sum_probs=93.2
Q ss_pred CCCcchHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCC--CCCccc--------------------HHHHHhhc--
Q psy3624 581 PPRPAVPDAVAKCRS-AGIRVIMVTGDHPVTAKAIAKAVGII--SEGSET--------------------LEDIAKRR-- 635 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~-aGi~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~--------------------~~~~~~~~-- 635 (1010)
.+.+++.++|++|++ .|++++++|||+...+..+.+.+++. ..+... +.+..++.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 567899999999998 89999999999999999888777642 211100 00111110
Q ss_pred CCccccCCCCCcceeEEechhhhcCCHHHHH----HHHhccCcE------EEEecCh--hhHHHHHHHHHHc----CCeE
Q psy3624 636 RVPVSSLDPRESTTIVIQGSILRDMTTEQLE----NVLRTHREI------VFARTSP--TQKLHIVEGCQRL----GAIV 699 (1010)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~------v~~r~~p--~~K~~iv~~l~~~----g~~v 699 (1010)
..+......+ ....+....... ...+.+. .+....... -+....| .+|...++.+.+. ...+
T Consensus 116 ~~pg~~ve~k-~~~~~~h~r~~~-~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 116 QLPGAELEAK-GMAFALHYRQAP-QHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred cCCCcEEEeC-CcEEEEECCCCC-ccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 0000001111 111122221111 1112111 111122111 1233334 4899999987653 3579
Q ss_pred EEEcCCccCHHHhhhC----CceEeeCCCCCHHHHhhcCEEecCCCchhHHHHH
Q psy3624 700 AVTGDGVNDSPALKKA----DIGIAMGITGSDVSKQTADMILLDDNFASIVTGV 749 (1010)
Q Consensus 700 ~~iGDg~ND~~~l~~A----~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i 749 (1010)
+++||+.||.+||+.+ +.||+|| ++. ..|++.+. +.+.+.+.+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 9999999999999999 9999999 775 34677775 455555555
No 75
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.11 E-value=2.2e-05 Score=82.58 Aligned_cols=40 Identities=23% Similarity=0.358 Sum_probs=36.8
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
..+.++++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4445899999999999999999999999999999999986
No 76
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.07 E-value=2.3e-05 Score=81.81 Aligned_cols=112 Identities=15% Similarity=0.084 Sum_probs=75.9
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.... .. .......+..+..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~--------------------~n~~~~~~~~~~~ 127 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IY--------------------CNEADFSNEYIHI 127 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EE--------------------eceeEeeCCeeEE
Confidence 37999999999999999999999999999999998887744211 00 0000111111100
Q ss_pred CCHHHHHHHHhccCcEEE-E-ecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeC
Q psy3624 660 MTTEQLENVLRTHREIVF-A-RTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMG 722 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~-~-r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg 722 (1010)
.. . .+.... . .| ...|..+++.++...+.++|+|||.||.+|++.||+.+|=+
T Consensus 128 ~~--------p-~~~~~~~~~~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 128 DW--------P-HPCDGTCQNQC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred eC--------C-CCCccccccCC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 00 0 000000 0 11 34799999998877788999999999999999999988643
No 77
>PLN02954 phosphoserine phosphatase
Probab=98.06 E-value=3.7e-05 Score=81.07 Aligned_cols=133 Identities=23% Similarity=0.316 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.....- .. ... ...+ . .+.|....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~-----~~----~~~-~~~~---g-~~~g~~~~-- 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIF-----AN----QIL-FGDS---G-EYAGFDEN-- 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEE-----Ee----EEE-EcCC---C-cEECccCC--
Confidence 4789999999999999999999999999999999999999531100 00 000 0000 0 00000000
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHc-C-CeEEEEcCCccCHHHhhh--CCceEeeCCCC-CHHHHhhcCE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRL-G-AIVAVTGDGVNDSPALKK--ADIGIAMGITG-SDVSKQTADM 735 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-g-~~v~~iGDg~ND~~~l~~--A~vgIamg~~~-~~~ak~aAd~ 735 (1010)
. .. +....|.+.++.+.+. | +.++++||+.||+.|.+. ++++++.|... .+.....+|+
T Consensus 148 ------------~--~~--~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (224)
T PLN02954 148 ------------E--PT--SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADW 211 (224)
T ss_pred ------------C--cc--cCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCE
Confidence 0 00 1123477777776553 3 579999999999999888 45556655221 2334556899
Q ss_pred EecCCCchhHHH
Q psy3624 736 ILLDDNFASIVT 747 (1010)
Q Consensus 736 vl~~~~~~~i~~ 747 (1010)
++. ++..+.+
T Consensus 212 ~i~--~~~el~~ 221 (224)
T PLN02954 212 FVT--DFQDLIE 221 (224)
T ss_pred EEC--CHHHHHH
Confidence 885 3444443
No 78
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.04 E-value=4.5e-05 Score=80.52 Aligned_cols=43 Identities=9% Similarity=0.079 Sum_probs=39.6
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIIS 622 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~ 622 (1010)
+...+.+.++|++|+++||.|+++||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4577789999999999999999999999999999999999864
No 79
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.99 E-value=1.7e-05 Score=81.38 Aligned_cols=92 Identities=26% Similarity=0.366 Sum_probs=68.7
Q ss_pred cchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHH
Q psy3624 584 PAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTE 663 (1010)
Q Consensus 584 ~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 663 (1010)
+++.+.|+.++++|++++++||.....+.++++.+|+.... ++.. .+..-
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--------------------------v~~~-~~~~~--- 141 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--------------------------VIGN-ELFDN--- 141 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--------------------------EEEE-EEECT---
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--------------------------EEEE-eeeec---
Confidence 88889999999999999999999999999999999996521 0000 00000
Q ss_pred HHHHHHhccCcEEEEecChh-h--HHHHHHHH------HHcCCeEEEEcCCccCHHHhh
Q psy3624 664 QLENVLRTHREIVFARTSPT-Q--KLHIVEGC------QRLGAIVAVTGDGVNDSPALK 713 (1010)
Q Consensus 664 ~~~~~~~~~~~~v~~r~~p~-~--K~~iv~~l------~~~g~~v~~iGDg~ND~~~l~ 713 (1010)
.......+.++. + |.+.++.+ +.....++++|||.||.+|||
T Consensus 142 --------~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 142 --------GGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp --------TCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred --------ccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 001134455544 3 99999999 345788999999999999986
No 80
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.96 E-value=3.2e-05 Score=80.05 Aligned_cols=109 Identities=17% Similarity=0.179 Sum_probs=76.5
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhh
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILR 658 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 658 (1010)
..++.+++.+.++.+++.|++++++||.....+..+++.+|+..--...+ .. ..+ -..+|...
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l-----------~~-~~~----g~~~g~~~- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRL-----------EE-SED----GIYTGNID- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecce-----------EE-cCC----CEEeCCcc-
Confidence 34689999999999999999999999999999999999999853100000 00 000 01111110
Q ss_pred cCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH-cC---CeEEEEcCCccCHHHhhhCCceEeeC
Q psy3624 659 DMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR-LG---AIVAVTGDGVNDSPALKKADIGIAMG 722 (1010)
Q Consensus 659 ~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~-~g---~~v~~iGDg~ND~~~l~~A~vgIamg 722 (1010)
--.+..+.|.+.++.+.+ .+ +.++++||+.+|.+|++.|+.++++.
T Consensus 148 ------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 ------------------GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ------------------CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 011345678877776543 34 36899999999999999999999986
No 81
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.93 E-value=2.3e-05 Score=79.25 Aligned_cols=101 Identities=22% Similarity=0.306 Sum_probs=69.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..--... ... ..+. .++|...
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~-----------~~~-~~~g----~~~g~~~--- 133 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANR-----------LEF-DDNG----LLTGPIE--- 133 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeee-----------EEE-CCCC----EEeCccC---
Confidence 36799999999999999999999999999999999999985310000 000 0000 1111100
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHc----CCeEEEEcCCccCHHHhhhC
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRL----GAIVAVTGDGVNDSPALKKA 715 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A 715 (1010)
.+ ....+..|.+.++.+.+. ...++++|||.||.+|++.|
T Consensus 134 -----------~~----~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 134 -----------GQ----VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -----------Cc----ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 00 123457899988887553 34699999999999999875
No 82
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.92 E-value=4.1e-05 Score=80.30 Aligned_cols=109 Identities=17% Similarity=0.122 Sum_probs=73.1
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +.....- ......+|......
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~--------------------~n~~~~~~~~~~~~ 132 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIY--------------------CNGSDFSGEYITIT 132 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEE--------------------EeEEEecCCeeEEe
Confidence 68999999999999999999999999999999999887 6331000 00001111111000
Q ss_pred CHHHHHHHHhccCcEE-E-EecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEe
Q psy3624 661 TTEQLENVLRTHREIV-F-ARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIA 720 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v-~-~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 720 (1010)
.+ .+... + .++ ...|.++++.++.....++++|||.||++|.+.||+.+|
T Consensus 133 kp---------~p~~~~~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 133 WP---------HPCDEHCQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred cc---------CCccccccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 00 00000 0 001 124888888887777789999999999999999999776
No 83
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.86 E-value=0.00011 Score=76.97 Aligned_cols=127 Identities=21% Similarity=0.302 Sum_probs=89.5
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhh
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILR 658 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 658 (1010)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+..--. .++.+...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~------------------------~i~g~~~~- 141 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD------------------------VIVGGDDV- 141 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc------------------------eEEcCCCC-
Confidence 34688999999999999999999999999999999999999965211 01111110
Q ss_pred cCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCC---ceEeeCCC-CCHHHHhhcC
Q psy3624 659 DMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKAD---IGIAMGIT-GSDVSKQTAD 734 (1010)
Q Consensus 659 ~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~---vgIamg~~-~~~~ak~aAd 734 (1010)
-...-.|.....+++.+....+.++||||..+|+.|=++|+ +|+..|.+ ..+.....+|
T Consensus 142 -----------------~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d 204 (220)
T COG0546 142 -----------------PPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGAD 204 (220)
T ss_pred -----------------CCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCC
Confidence 01112345555555555444347999999999999999998 77888743 3455566699
Q ss_pred EEecCCCchhHHHHH
Q psy3624 735 MILLDDNFASIVTGV 749 (1010)
Q Consensus 735 ~vl~~~~~~~i~~~i 749 (1010)
+++. ++..+...+
T Consensus 205 ~vi~--~~~el~~~l 217 (220)
T COG0546 205 VVID--SLAELLALL 217 (220)
T ss_pred EEEC--CHHHHHHHH
Confidence 9985 455454443
No 84
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.85 E-value=5.4e-05 Score=77.28 Aligned_cols=114 Identities=15% Similarity=0.127 Sum_probs=75.7
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+..--. .++++.....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~------------------------~i~~~~~~~~ 126 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI------------------------EIYSNPASFD 126 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee------------------------EEeccCceEC
Confidence 3788999999999999999999999999999999999998853110 0111100000
Q ss_pred CCHHHHHHHHhccCcEEEEe-cChhhHHHHHHHHHHc-CCeEEEEcCCccCHHHhhhCCceEe
Q psy3624 660 MTTEQLENVLRTHREIVFAR-TSPTQKLHIVEGCQRL-GAIVAVTGDGVNDSPALKKADIGIA 720 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r-~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIa 720 (1010)
....+.-...++. .+.. .....|.++++.+++. ...++++|||.||++|.++||+-.|
T Consensus 127 -~~g~~~~~~~~~~--~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 127 -NDGRHIVWPHHCH--GCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred -CCCcEEEecCCCC--ccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 0000000000000 1111 1123589999998887 8889999999999999999988665
No 85
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.85 E-value=9.6e-05 Score=78.66 Aligned_cols=157 Identities=17% Similarity=0.184 Sum_probs=85.8
Q ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCc-------------------------------ccHHHHHhhc-CCccc
Q psy3624 593 CRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGS-------------------------------ETLEDIAKRR-RVPVS 640 (1010)
Q Consensus 593 l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~-------------------------------~~~~~~~~~~-~~~~~ 640 (1010)
..+.++.++++|||+...+..+.++.++..++. ..+.+...+. +....
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q 110 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGLRPQ 110 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEG
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCcccC
Confidence 347889999999999999999999999865321 0011111111 11111
Q ss_pred cCCCCC--cceeEEechhhhcCCHHHHHHHHhccCc---EE-----EEecCh--hhHHHHHHHHHHc-C---CeEEEEcC
Q psy3624 641 SLDPRE--STTIVIQGSILRDMTTEQLENVLRTHRE---IV-----FARTSP--TQKLHIVEGCQRL-G---AIVAVTGD 704 (1010)
Q Consensus 641 ~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~v-----~~r~~p--~~K~~iv~~l~~~-g---~~v~~iGD 704 (1010)
...... .....+....... ..+++...+....- ++ +.+.-| ..|...++.++++ + +.|+++||
T Consensus 111 ~~~~q~~~k~sy~~~~~~~~~-~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGD 189 (247)
T PF05116_consen 111 PESEQRPFKISYYVDPDDSAD-ILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGD 189 (247)
T ss_dssp GCCCGCCTCECEEEETTSHCH-HHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEES
T ss_pred CccccCCeeEEEEEecccchh-HHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeC
Confidence 111111 1111222222111 12344444432221 12 223334 4799999999775 2 46888999
Q ss_pred CccCHHHhhhCCceEeeCCCCCHH-----HHhhc---C-EEecCCCchhHHHHHHH
Q psy3624 705 GVNDSPALKKADIGIAMGITGSDV-----SKQTA---D-MILLDDNFASIVTGVEE 751 (1010)
Q Consensus 705 g~ND~~~l~~A~vgIamg~~~~~~-----ak~aA---d-~vl~~~~~~~i~~~i~~ 751 (1010)
+.||.+||..++.||.+| |+.+. ..... . |+...+.-.||.+++++
T Consensus 190 SgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~ 244 (247)
T PF05116_consen 190 SGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQH 244 (247)
T ss_dssp SGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHHH
T ss_pred CCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHHH
Confidence 999999999999999999 98888 32222 2 45556667888888765
No 86
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.83 E-value=9.9e-05 Score=77.89 Aligned_cols=128 Identities=22% Similarity=0.297 Sum_probs=85.7
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
.++.|++.+.++.|++.|+++.++||........+.+.+|+...- ..++.++...
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------------------------~~~~~~~~~~- 146 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF------------------------SVVIGGDSLP- 146 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc------------------------cEEEcCCCCC-
Confidence 358899999999999999999999999999999999999985311 0011111100
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc-eEeeC--CC-CCHHHHhhcCE
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI-GIAMG--IT-GSDVSKQTADM 735 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIamg--~~-~~~~ak~aAd~ 735 (1010)
...-.|+--..+++.++...+.++++||+.||+.+.+.||+ +|.+. .+ ..+.....+++
T Consensus 147 -----------------~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~ 209 (226)
T PRK13222 147 -----------------NKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDV 209 (226)
T ss_pred -----------------CCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCE
Confidence 00112232333444444445679999999999999999998 55443 11 23344456888
Q ss_pred EecCCCchhHHHHHHH
Q psy3624 736 ILLDDNFASIVTGVEE 751 (1010)
Q Consensus 736 vl~~~~~~~i~~~i~~ 751 (1010)
++ +++..+...+++
T Consensus 210 ~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 210 VI--DHFAELLPLLGL 223 (226)
T ss_pred EE--CCHHHHHHHHHH
Confidence 87 567777777654
No 87
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.74 E-value=0.0001 Score=70.57 Aligned_cols=118 Identities=17% Similarity=0.173 Sum_probs=76.4
Q ss_pred eecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechh
Q psy3624 577 SMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSI 656 (1010)
Q Consensus 577 ~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 656 (1010)
....++.+++.+.+++|++.|++++++||+....+...++++|+...... ++....
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~------------------------i~~~~~ 75 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP------------------------VITSNG 75 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh------------------------eeccch
Confidence 34458999999999999999999999999999999999999998421100 000000
Q ss_pred hhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCC-ceEe
Q psy3624 657 LRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKAD-IGIA 720 (1010)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~-vgIa 720 (1010)
........ ..........+.+-.++.+..+.+.+......++++||+.+|+.|.+.++ -+|+
T Consensus 76 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 76 AAIYYPKE--GLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred hhhhcccc--cccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 00000000 00001112244455566666666666655678999999999999999944 4543
No 88
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.73 E-value=0.00015 Score=75.12 Aligned_cols=125 Identities=18% Similarity=0.243 Sum_probs=81.9
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.+++|+++|+++.++||.+...+....+.+|+..-- ..++...+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f------------------------~~i~~~~~~--- 127 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF------------------------DHVIGSDEV--- 127 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe------------------------eeEEecCcC---
Confidence 68899999999999999999999999999999999999985310 001111000
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE---eeCC-CCCHHHHhhcCEE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI---AMGI-TGSDVSKQTADMI 736 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI---amg~-~~~~~ak~aAd~v 736 (1010)
...+-.|+--.++++.++-..+.++++||+.+|+.+-+++|+.. .-|. +..+..+..+|++
T Consensus 128 ---------------~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~ 192 (205)
T TIGR01454 128 ---------------PRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFL 192 (205)
T ss_pred ---------------CCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCee
Confidence 01111233333334444333567999999999999999999853 3341 2233456678998
Q ss_pred ecCCCchhHHHHH
Q psy3624 737 LLDDNFASIVTGV 749 (1010)
Q Consensus 737 l~~~~~~~i~~~i 749 (1010)
+. ++..+..++
T Consensus 193 ~~--~~~~l~~~~ 203 (205)
T TIGR01454 193 LR--KPQSLLALC 203 (205)
T ss_pred eC--CHHHHHHHh
Confidence 74 455555443
No 89
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.65 E-value=0.00032 Score=72.69 Aligned_cols=39 Identities=28% Similarity=0.480 Sum_probs=36.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVG 619 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~g 619 (1010)
++.+.+.++|++|++.|++++++|||....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 588999999999999999999999999999999998854
No 90
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.56 E-value=0.00078 Score=83.59 Aligned_cols=162 Identities=17% Similarity=0.215 Sum_probs=91.9
Q ss_pred CCCcchHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCC--CCCCcccHH---------------------HHHhhc-
Q psy3624 581 PPRPAVPDAVAKCRS-AGIRVIMVTGDHPVTAKAIAKAVGI--ISEGSETLE---------------------DIAKRR- 635 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~-aGi~v~~~TGd~~~ta~~ia~~~gi--~~~~~~~~~---------------------~~~~~~- 635 (1010)
.+.+++.+++++|.+ .|+.|+++|||+...........++ ..++...+. .+.+..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 467899999999999 6999999999999998887765553 111111110 000000
Q ss_pred -CCccccCCCCCcceeEEe--c--hhhhcCCHHHHH----HHHhccCcEE-----EEecCh--hhHHHHHHHHHHc--CC
Q psy3624 636 -RVPVSSLDPRESTTIVIQ--G--SILRDMTTEQLE----NVLRTHREIV-----FARTSP--TQKLHIVEGCQRL--GA 697 (1010)
Q Consensus 636 -~~~~~~~~~~~~~~~~~~--g--~~~~~~~~~~~~----~~~~~~~~~v-----~~r~~p--~~K~~iv~~l~~~--g~ 697 (1010)
..+..... .....+... . .++.....+++. .........+ +....| .+|+..++.+.+. ..
T Consensus 594 ~~~~gs~ie-~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d 672 (726)
T PRK14501 594 DRTPGSFIE-EKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYD 672 (726)
T ss_pred hcCCCcEEE-EcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCC
Confidence 00000000 000111111 0 011000011122 1111111111 123334 5899999998874 25
Q ss_pred eEEEEcCCccCHHHhhhC---CceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHH
Q psy3624 698 IVAVTGDGVNDSPALKKA---DIGIAMGITGSDVSKQTADMILLDDNFASIVTGVE 750 (1010)
Q Consensus 698 ~v~~iGDg~ND~~~l~~A---~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~ 750 (1010)
.++++||+.||.+||+.+ +.+|+|| ++ +.+|++++.+. +.+...++
T Consensus 673 ~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 673 FVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred EEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 799999999999999996 6899999 64 56889998754 44666554
No 91
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.47 E-value=0.00052 Score=74.39 Aligned_cols=125 Identities=16% Similarity=0.255 Sum_probs=78.7
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
.++.|++.++++.|+++|+++.++||.+...+..+.++.|+..-. ..++.+++.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f------------------------~~i~~~d~~-- 153 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF------------------------RWIIGGDTL-- 153 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC------------------------eEEEecCCC--
Confidence 368899999999999999999999999999888888888874210 001111100
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc-eEee--CCCC-CHHHHhhcCE
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI-GIAM--GITG-SDVSKQTADM 735 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam--g~~~-~~~ak~aAd~ 735 (1010)
-..+-.|+--..+++.+.-..+.++++||+.||+.+.+.||+ .+++ |.+. .+.....+|+
T Consensus 154 ----------------~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~ 217 (272)
T PRK13223 154 ----------------PQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPAL 217 (272)
T ss_pred ----------------CCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCE
Confidence 000111121223333332234679999999999999999997 3443 3122 2233457888
Q ss_pred EecCCCchhHHHH
Q psy3624 736 ILLDDNFASIVTG 748 (1010)
Q Consensus 736 vl~~~~~~~i~~~ 748 (1010)
++. ++..+.++
T Consensus 218 vi~--~l~el~~~ 228 (272)
T PRK13223 218 VID--DLRALLPG 228 (272)
T ss_pred EEC--CHHHHHHH
Confidence 873 45555544
No 92
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.44 E-value=0.00069 Score=70.80 Aligned_cols=125 Identities=20% Similarity=0.177 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+..-- ..++.+++.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f------------------------~~i~~~~~~--- 134 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF------------------------DVVITLDDV--- 134 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce------------------------eEEEecCcC---
Confidence 47899999999999999999999999999999999999985310 011111110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCce---EeeCCCCCHH-HHhhcCEE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIG---IAMGITGSDV-SKQTADMI 736 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg---Iamg~~~~~~-ak~aAd~v 736 (1010)
-..+-.|+--.++++.++.....+++|||+.+|+.+-++||+- ++-|....+. ....+|++
T Consensus 135 ---------------~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~ 199 (214)
T PRK13288 135 ---------------EHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFM 199 (214)
T ss_pred ---------------CCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEE
Confidence 0011223333344444433345799999999999999999983 3334112222 23458887
Q ss_pred ecCCCchhHHHHH
Q psy3624 737 LLDDNFASIVTGV 749 (1010)
Q Consensus 737 l~~~~~~~i~~~i 749 (1010)
+. ++..+...+
T Consensus 200 i~--~~~~l~~~i 210 (214)
T PRK13288 200 LD--KMSDLLAIV 210 (214)
T ss_pred EC--CHHHHHHHH
Confidence 64 566665544
No 93
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.37 E-value=0.0014 Score=67.92 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=75.6
Q ss_pred CCCcchHHHHH-HHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 581 PPRPAVPDAVA-KCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 581 ~l~~~~~~aI~-~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
.+.|++.+.|+ .+++.|++++++|+-....++.+|+..++..... ++ |..++.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-------------------------~i-~t~le~ 147 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-------------------------LI-ASQIER 147 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-------------------------EE-EEEeEE
Confidence 47899999996 7888999999999999999999999866532100 11 111110
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHH-HHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHH
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGC-QRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVS 729 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~a 729 (1010)
... ..+.-..|.-++|.+-++.. ........+-||+.||.|||+.||.+++++ ..+..
T Consensus 148 ~~g----------g~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn--p~~~L 206 (210)
T TIGR01545 148 GNG----------GWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS--KRGEL 206 (210)
T ss_pred eCC----------ceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC--cchHh
Confidence 000 00011235567888866643 323345679999999999999999999984 44443
No 94
>PRK11590 hypothetical protein; Provisional
Probab=97.34 E-value=0.0018 Score=67.30 Aligned_cols=112 Identities=13% Similarity=0.068 Sum_probs=76.6
Q ss_pred CCCcchHHHH-HHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 581 PPRPAVPDAV-AKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 581 ~l~~~~~~aI-~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
.+.|++.+.| +.+++.|++++++|+.....+..+++.+|+.... . ++ |..++.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~------------------------~i-~t~l~~ 148 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-N------------------------LI-ASQMQR 148 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-c------------------------eE-EEEEEE
Confidence 4589999999 5788999999999999999999999999962100 0 11 111110
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHH-HHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHH
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGC-QRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSK 730 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak 730 (1010)
. ....+.-..|..+.|.+-++.. ........+-||+.||.|||+.|+.+++++ ..+..+
T Consensus 149 ~----------~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn--p~~~l~ 208 (211)
T PRK11590 149 R----------YGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT--PRGELQ 208 (211)
T ss_pred E----------EccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC--ccHHhh
Confidence 0 0000011235667888877654 334456679999999999999999999984 544443
No 95
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.32 E-value=0.00077 Score=70.33 Aligned_cols=116 Identities=19% Similarity=0.228 Sum_probs=74.8
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+..-- ..++.+.+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------------------------~~~~~~~~~~-- 138 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF------------------------SVLIGGDSLA-- 138 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC------------------------cEEEecCCCC--
Confidence 58899999999999999999999999999999999999984310 0011111100
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEe-e--CCCCC-HHHHhhcCEE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIA-M--GITGS-DVSKQTADMI 736 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa-m--g~~~~-~~ak~aAd~v 736 (1010)
..+-.|+-=.++.+.+......++++||+.+|+.+.++||+... + |-... +.....||++
T Consensus 139 ----------------~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~ 202 (213)
T TIGR01449 139 ----------------QRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVL 202 (213)
T ss_pred ----------------CCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeE
Confidence 00111222223333333334569999999999999999998543 3 31111 2333468887
Q ss_pred ec
Q psy3624 737 LL 738 (1010)
Q Consensus 737 l~ 738 (1010)
+.
T Consensus 203 i~ 204 (213)
T TIGR01449 203 YD 204 (213)
T ss_pred eC
Confidence 74
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.23 E-value=0.0034 Score=67.83 Aligned_cols=122 Identities=18% Similarity=0.213 Sum_probs=78.7
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+...- ..++.++.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F------------------------~~vi~~~~---- 193 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF------------------------SVVQAGTP---- 193 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe------------------------EEEEecCC----
Confidence 57899999999999999999999999999999999999985310 11111111
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE---eeCCCCCH-HHHhhcCEE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI---AMGITGSD-VSKQTADMI 736 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI---amg~~~~~-~ak~aAd~v 736 (1010)
+ ...|+--..+++.++-..+.+++|||+.+|+.+-++|++-. .-|.+..+ .....+|++
T Consensus 194 ---------------~--~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~ 256 (273)
T PRK13225 194 ---------------I--LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWL 256 (273)
T ss_pred ---------------C--CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEE
Confidence 0 00121111222222223456999999999999999999843 23322222 223458988
Q ss_pred ecCCCchhHHHHH
Q psy3624 737 LLDDNFASIVTGV 749 (1010)
Q Consensus 737 l~~~~~~~i~~~i 749 (1010)
+. ++..+...+
T Consensus 257 i~--~~~eL~~~~ 267 (273)
T PRK13225 257 LE--TPSDLLQAV 267 (273)
T ss_pred EC--CHHHHHHHH
Confidence 74 566665544
No 97
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.18 E-value=0.0013 Score=69.16 Aligned_cols=113 Identities=19% Similarity=0.237 Sum_probs=73.5
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.++++.|++.|+++.++|+........+.+++|+..-- ..++.+...
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f------------------------~~~~~~~~~--- 144 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF------------------------DALASAEKL--- 144 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc------------------------cEEEEcccC---
Confidence 57899999999999999999999999999999999999985411 011111110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcC---CeEEEEcCCccCHHHhhhCCceEeeCCCC---CHHHHhhcC
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLG---AIVAVTGDGVNDSPALKKADIGIAMGITG---SDVSKQTAD 734 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g---~~v~~iGDg~ND~~~l~~A~vgIamg~~~---~~~ak~aAd 734 (1010)
-..+-.|+ -+.+.+++.| +.++++||+.||+.+-+.||+....-..+ .+.-...||
T Consensus 145 ---------------~~~Kp~~~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~ 206 (222)
T PRK10826 145 ---------------PYSKPHPE---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALAD 206 (222)
T ss_pred ---------------CCCCCCHH---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhh
Confidence 00111222 2233334333 56999999999999999999854332122 122233467
Q ss_pred EEec
Q psy3624 735 MILL 738 (1010)
Q Consensus 735 ~vl~ 738 (1010)
+++.
T Consensus 207 ~~~~ 210 (222)
T PRK10826 207 VKLE 210 (222)
T ss_pred eecc
Confidence 6653
No 98
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.17 E-value=0.0022 Score=68.65 Aligned_cols=118 Identities=17% Similarity=0.139 Sum_probs=78.9
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+..-- ..++.+.+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F------------------------d~iv~~~~~~-- 161 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF------------------------QAVIIGSECE-- 161 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC------------------------cEEEecCcCC--
Confidence 57889999999999999999999999999999999999985311 1122222110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE-ee--CCCCCH-HHHhhcCEE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI-AM--GITGSD-VSKQTADMI 736 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-am--g~~~~~-~ak~aAd~v 736 (1010)
..+-.|+--..+.+.++-..+.+++|||+.+|+.+=++|++-. ++ | ...+ .....+|++
T Consensus 162 ----------------~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g-~~~~~l~~~~a~~v 224 (248)
T PLN02770 162 ----------------HAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTR-NPESLLMEAKPTFL 224 (248)
T ss_pred ----------------CCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCC-CCHHHHhhcCCCEE
Confidence 1122233334444444434467999999999999999999843 22 3 2222 223468888
Q ss_pred ecCCC
Q psy3624 737 LLDDN 741 (1010)
Q Consensus 737 l~~~~ 741 (1010)
+.+-.
T Consensus 225 i~~~~ 229 (248)
T PLN02770 225 IKDYE 229 (248)
T ss_pred eccch
Confidence 86543
No 99
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.08 E-value=0.0078 Score=64.07 Aligned_cols=138 Identities=13% Similarity=0.197 Sum_probs=82.7
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+...+....-... .++.+ -+.+|.. .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L--------~f~~d----GvltG~~-~- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFM--------DFDED----GVLKGFK-G- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeE--------EECCC----CeEeCCC-C-
Confidence 36899999999999999999999999999999999999998643211000000 00000 0111210 0
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHH-----HH--HcCCeEEEEcCCccCHHHhhhC---CceEeeC-CCC-CH
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEG-----CQ--RLGAIVAVTGDGVNDSPALKKA---DIGIAMG-ITG-SD 727 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~-----l~--~~g~~v~~iGDg~ND~~~l~~A---~vgIamg-~~~-~~ 727 (1010)
..+. ...|.+.+.. ++ .....|+++|||.||++|..-. .--+.+| .|. .|
T Consensus 186 --------------P~i~----~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e 247 (277)
T TIGR01544 186 --------------PLIH----TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVD 247 (277)
T ss_pred --------------Cccc----ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHH
Confidence 0011 1345554432 22 1235799999999999995433 2223333 122 22
Q ss_pred ----HHHhhcCEEecCCCchhHHHHH
Q psy3624 728 ----VSKQTADMILLDDNFASIVTGV 749 (1010)
Q Consensus 728 ----~ak~aAd~vl~~~~~~~i~~~i 749 (1010)
.-+++=|+|+.+|.-..++..|
T Consensus 248 ~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 248 ELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHHHHHhCCEEEECCCCchHHHHH
Confidence 2356789999987766666554
No 100
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.05 E-value=0.0029 Score=66.84 Aligned_cols=123 Identities=19% Similarity=0.132 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...- ..++.+...
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f------------------------~~i~~~~~~--- 147 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC------------------------AVLIGGDTL--- 147 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc------------------------cEEEecCcC---
Confidence 57899999999999999999999999998888888888874310 111111110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE---eeCCC-CCH-HHHhhcCE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI---AMGIT-GSD-VSKQTADM 735 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI---amg~~-~~~-~ak~aAd~ 735 (1010)
-..+-.|+--.++++.+.-..+.+++|||+.||+.|-+.||+.. .-|-. ..+ .....+|+
T Consensus 148 ---------------~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~ 212 (229)
T PRK13226 148 ---------------AERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADV 212 (229)
T ss_pred ---------------CCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCe
Confidence 01122333344455555444567999999999999999999853 23311 112 22345888
Q ss_pred EecCCCchhHHH
Q psy3624 736 ILLDDNFASIVT 747 (1010)
Q Consensus 736 vl~~~~~~~i~~ 747 (1010)
++. ++..+.+
T Consensus 213 ~i~--~~~el~~ 222 (229)
T PRK13226 213 LVE--QPQLLWN 222 (229)
T ss_pred eeC--CHHHHHH
Confidence 884 3444443
No 101
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.05 E-value=0.0033 Score=61.66 Aligned_cols=104 Identities=15% Similarity=0.248 Sum_probs=66.3
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHH---HHHHHc---C--CCCCCcccHHHHHhhcCCccccCCCCCccee
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAK---AIAKAV---G--IISEGSETLEDIAKRRRVPVSSLDPRESTTI 650 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (1010)
++.+.+++.+++++++++|++++++|||+...+. ....++ | +... ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g------------------------~li 80 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG------------------------PVL 80 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc------------------------eEE
Confidence 4688999999999999999999999999988874 455442 2 3210 000
Q ss_pred EEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH-----cCCeEEEEcCCccCHHHhhhCCce
Q psy3624 651 VIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR-----LGAIVAVTGDGVNDSPALKKADIG 718 (1010)
Q Consensus 651 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~-----~g~~v~~iGDg~ND~~~l~~A~vg 718 (1010)
.-.|...... .++ +..+..-+.|.+.++.+.+ ....++.+||+.+|+.+.+++++.
T Consensus 81 ~~~g~~~~~~-----------~~e-~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 81 LSPDRLFAAL-----------HRE-VISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred EcCCcchhhh-----------hcc-cccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 1111111000 000 2222222348777877766 345678899999999999988764
No 102
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.95 E-value=0.0034 Score=67.32 Aligned_cols=116 Identities=13% Similarity=0.106 Sum_probs=76.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+..- ...++.+.+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~------------------------Fd~ii~~~d~~-- 162 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF------------------------FSVVLAAEDVY-- 162 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh------------------------CcEEEecccCC--
Confidence 5689999999999999999999999999999999999998531 11122222210
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE-eeCCCCCHHHHhhcCEEec
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI-AMGITGSDVSKQTADMILL 738 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-amg~~~~~~ak~aAd~vl~ 738 (1010)
...-.|+-=...++.++-....+++|||+.+|+.+-++||+-. ++...........+|+++.
T Consensus 163 ----------------~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~ 225 (260)
T PLN03243 163 ----------------RGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR 225 (260)
T ss_pred ----------------CCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC
Confidence 1112233333344444434456999999999999999999833 3321222322334677654
No 103
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.93 E-value=0.0018 Score=67.75 Aligned_cols=41 Identities=22% Similarity=0.350 Sum_probs=36.2
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCC----CHHHHHHHHHHcCCCC
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGD----HPVTAKAIAKAVGIIS 622 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd----~~~ta~~ia~~~gi~~ 622 (1010)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 4455999999999999999999999 6779999999999953
No 104
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.92 E-value=0.0048 Score=66.27 Aligned_cols=96 Identities=20% Similarity=0.186 Sum_probs=65.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|+++|+++.++||.+...+..+.+++|+..-. ...++.+.+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-----------------------~d~ii~~~~~--- 152 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-----------------------PDYNVTTDDV--- 152 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-----------------------CceEEccccC---
Confidence 47799999999999999999999999999999999999885410 0011121110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHc-CCeEEEEcCCccCHHHhhhCCc
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRL-GAIVAVTGDGVNDSPALKKADI 717 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~v 717 (1010)
-..+-.|+--...++.+.-. .+.+++|||+.+|+.+=+.||+
T Consensus 153 ---------------~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 153 ---------------PAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred ---------------CCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCC
Confidence 00111233323333333321 3459999999999999999996
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.89 E-value=0.0024 Score=66.78 Aligned_cols=90 Identities=22% Similarity=0.333 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCC----HHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechh
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDH----PVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSI 656 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 656 (1010)
.+.+++++.++.+++.|+++.++|||+ ..++..+.+..|+..... .
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~----------------------f-------- 163 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM----------------------N-------- 163 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc----------------------e--------
Confidence 477889999999999999999999985 568889998899942110 0
Q ss_pred hhcCCHHHHHHHHhccCcEEEEecCh--hhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc-eEee
Q psy3624 657 LRDMTTEQLENVLRTHREIVFARTSP--TQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI-GIAM 721 (1010)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~v~~r~~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam 721 (1010)
.++++..++ .+|.. .+++.+ .++++||..+|..+-+.||+ +|.+
T Consensus 164 -----------------~vil~gd~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 164 -----------------PVIFAGDKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred -----------------eEEEcCCCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 012222211 34544 334444 58899999999999999998 4433
No 106
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.78 E-value=0.0056 Score=64.23 Aligned_cols=98 Identities=29% Similarity=0.274 Sum_probs=68.2
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--CCCcccHHHHHhhcCCccccCCCCCcceeEEechhh
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII--SEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSIL 657 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 657 (1010)
.++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+. .-. ..++.+.+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f------------------------~~i~~~~~~ 141 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV------------------------DAVVCPSDV 141 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC------------------------CEEEcCCcC
Confidence 378999999999999999999999999999999999999985 210 111111110
Q ss_pred hcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHc-CCeEEEEcCCccCHHHhhhCCceE
Q psy3624 658 RDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRL-GAIVAVTGDGVNDSPALKKADIGI 719 (1010)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgI 719 (1010)
. ..+-.|+--...++.+.-. ...++++||+.+|+.+-++||+..
T Consensus 142 ~------------------~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 142 A------------------AGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred C------------------CCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 0 0111223222333333322 357999999999999999999976
No 107
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.72 E-value=0.0044 Score=63.76 Aligned_cols=93 Identities=17% Similarity=0.085 Sum_probs=65.1
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
+++.++..++++.|++.|+++.++||.+...+..+.+.+|+..-- ..++.+++
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f------------------------~~~~~~~~--- 157 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF------------------------PVQIWMED--- 157 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC------------------------CEEEeecC---
Confidence 456677899999999999999999999999999999999985311 01111111
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhC
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKA 715 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A 715 (1010)
+..+-.|+.-..+++.+.-....+++|||+.+|+.+-++|
T Consensus 158 ----------------~~~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 ----------------CPPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred ----------------CCCCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 1112334444455555544556799999999999886654
No 108
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.68 E-value=0.0075 Score=59.79 Aligned_cols=37 Identities=16% Similarity=0.341 Sum_probs=34.2
Q ss_pred chHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 585 AVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 585 ~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
.+...+.+|+++|++|+.+|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4667899999999999999999999999999999987
No 109
>PRK11587 putative phosphatase; Provisional
Probab=96.68 E-value=0.011 Score=61.84 Aligned_cols=114 Identities=17% Similarity=0.107 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+... ..++.+++.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-------------------------~~i~~~~~~--- 134 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-------------------------EVFVTAERV--- 134 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-------------------------cEEEEHHHh---
Confidence 5789999999999999999999999987777666666776321 012222111
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc-eEeeCCCCC-HHHHhhcCEEec
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI-GIAMGITGS-DVSKQTADMILL 738 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIamg~~~~-~~ak~aAd~vl~ 738 (1010)
-...-.|+--....+.+.-..+.+++|||+.+|+.+-+.||+ .|++. ++. +.....+|+++.
T Consensus 135 ---------------~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 135 ---------------KRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred ---------------cCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 001122333333334343345679999999999999999998 45554 332 222335677664
No 110
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.67 E-value=0.0043 Score=61.50 Aligned_cols=156 Identities=20% Similarity=0.287 Sum_probs=91.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccc----cCCCCCcceeEEechh
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVS----SLDPRESTTIVIQGSI 656 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~ 656 (1010)
++-|++.++.+.|++. ...+++|-.-.+-+.++|+.+|++..+.....-..++...+.. ... .-.....++|++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~-~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLS-IIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHH-hcCccccccHHH
Confidence 5779999999999876 4556666667778899999999965322100000000000000 000 000001233332
Q ss_pred hhcCCHHHHHHHHhccCcEEEEecChh---------------hHHHHHHHHHHc---CCeEEEEcCCccCHHHhhhCC-c
Q psy3624 657 LRDMTTEQLENVLRTHREIVFARTSPT---------------QKLHIVEGCQRL---GAIVAVTGDGVNDSPALKKAD-I 717 (1010)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~v~~r~~p~---------------~K~~iv~~l~~~---g~~v~~iGDg~ND~~~l~~A~-v 717 (1010)
+-. ++++ +|.|..|. .|.++++.+-+. ....+++||+..|+.||+.+. -
T Consensus 161 lfe----~lDe--------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 161 LFE----KLDE--------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred HHH----HHHH--------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhcc
Confidence 211 1111 44455554 455555554432 234789999999999999884 2
Q ss_pred -eEeeCCCCCHHHHhhcCEEecCCCchhHHHHHH
Q psy3624 718 -GIAMGITGSDVSKQTADMILLDDNFASIVTGVE 750 (1010)
Q Consensus 718 -gIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~ 750 (1010)
|+|+.-||.+-+...||+.+.+.+.......|+
T Consensus 229 GglAvaFNGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 229 GGLAVAFNGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred CceEEEecCCcccccccceEEeccchhhhhHHHH
Confidence 255555899999999999999888877777664
No 111
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.66 E-value=0.01 Score=64.25 Aligned_cols=41 Identities=22% Similarity=0.314 Sum_probs=36.8
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
++-|++.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999999888888877764
No 112
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.65 E-value=0.0097 Score=66.48 Aligned_cols=115 Identities=13% Similarity=0.129 Sum_probs=76.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.||+.+.++.|+++|+++.++|+.+...+..+.+..||..- ...++.+++..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y------------------------Fd~Iv~sddv~-- 269 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF------------------------FSVIVAAEDVY-- 269 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH------------------------ceEEEecCcCC--
Confidence 4779999999999999999999999999999999999998531 11122222110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCce-EeeCCCCCHHH-HhhcCEEec
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIG-IAMGITGSDVS-KQTADMILL 738 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iamg~~~~~~a-k~aAd~vl~ 738 (1010)
...-.|+-=...++.++-....+++|||+.+|+.+-+.|++- |++. .+.+.. ...||+++.
T Consensus 270 ----------------~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 270 ----------------RGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVR 332 (381)
T ss_pred ----------------CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEEC
Confidence 011123333344444444457799999999999999999983 3333 322221 234777764
No 113
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.53 E-value=0.012 Score=62.79 Aligned_cols=67 Identities=19% Similarity=0.212 Sum_probs=49.0
Q ss_pred EecChhhHHHHHHHHHHc----CCeEEEEcCCccCHHHhhhC--------CceEeeCCCCCHHHHhhcCEEecCCCchhH
Q psy3624 678 ARTSPTQKLHIVEGCQRL----GAIVAVTGDGVNDSPALKKA--------DIGIAMGITGSDVSKQTADMILLDDNFASI 745 (1010)
Q Consensus 678 ~r~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~~l~~A--------~vgIamg~~~~~~ak~aAd~vl~~~~~~~i 745 (1010)
.+..+.+|...++.+.+. ...++++||+.||.+|++.+ +.||+|+ .+ ..+..|++++. +.+.+
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQV 235 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHH
Confidence 344556899988887553 34799999999999999999 5788885 33 24567899886 45556
Q ss_pred HHHH
Q psy3624 746 VTGV 749 (1010)
Q Consensus 746 ~~~i 749 (1010)
.+.+
T Consensus 236 ~~~L 239 (244)
T TIGR00685 236 LEFL 239 (244)
T ss_pred HHHH
Confidence 5555
No 114
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.42 E-value=0.011 Score=61.88 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+++++|++.|++++++|+-+...+....+.+|+..-- ..++.+.+..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f------------------------~~i~~~~~~~-- 147 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF------------------------DAVITSEEEG-- 147 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc------------------------cEEEEeccCC--
Confidence 57899999999999999999999999988888888888884310 0011111100
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCc-cCHHHhhhCCc-eEeeC
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGV-NDSPALKKADI-GIAMG 722 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~A~v-gIamg 722 (1010)
..+-.|+--..+.+.+.-....+++|||+. +|+.+-++||+ .|.+.
T Consensus 148 ----------------~~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 148 ----------------VEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred ----------------CCCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 011122222223333322335799999997 99999999997 44444
No 115
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.37 E-value=0.018 Score=57.22 Aligned_cols=50 Identities=16% Similarity=0.085 Sum_probs=42.4
Q ss_pred EEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcCCC
Q psy3624 572 FLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGD-HPVTAKAIAKAVGII 621 (1010)
Q Consensus 572 ~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd-~~~ta~~ia~~~gi~ 621 (1010)
.....+-+-++.|++.+.++.|+++|+++.++|+. ....+..+...+|+.
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 34444455578999999999999999999999987 888999999999985
No 116
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.35 E-value=0.018 Score=54.91 Aligned_cols=42 Identities=29% Similarity=0.438 Sum_probs=37.5
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCC--------HHHHHHHHHHcCCC
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDH--------PVTAKAIAKAVGII 621 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~--------~~ta~~ia~~~gi~ 621 (1010)
.++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 3678999999999999999999999998 77788888888874
No 117
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.29 E-value=0.018 Score=67.50 Aligned_cols=123 Identities=13% Similarity=0.083 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..-- ..++.+++.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f------------------------~~i~~~d~v--- 382 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV------------------------TETFSIEQI--- 382 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc------------------------ceeEecCCC---
Confidence 68899999999999999999999999999999999999985310 112222111
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc-eEeeCC-CCCHHHHhhcCEEec
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI-GIAMGI-TGSDVSKQTADMILL 738 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIamg~-~~~~~ak~aAd~vl~ 738 (1010)
-....|+--...++.+ ..+.++++||+.+|+.+-+.|++ .|++.- ...+.....+|+++.
T Consensus 383 ----------------~~~~kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~ 444 (459)
T PRK06698 383 ----------------NSLNKSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID 444 (459)
T ss_pred ----------------CCCCCcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC
Confidence 0011232212222222 23579999999999999999997 444420 222222345788874
Q ss_pred CCCchhHHHHHH
Q psy3624 739 DDNFASIVTGVE 750 (1010)
Q Consensus 739 ~~~~~~i~~~i~ 750 (1010)
++..+...+.
T Consensus 445 --~l~el~~~l~ 454 (459)
T PRK06698 445 --DLLELKGILS 454 (459)
T ss_pred --CHHHHHHHHH
Confidence 5555655553
No 118
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.25 E-value=0.013 Score=61.51 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=37.1
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
++.|++.+.++.|+++|+++.++|+-+...+....+..|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999999888888888888874
No 119
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.22 E-value=0.013 Score=60.24 Aligned_cols=95 Identities=19% Similarity=0.251 Sum_probs=65.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+++++|+++|+++.++|+-+...+....+.+|+...- ..++.+.+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f------------------------d~i~~s~~~--- 144 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF------------------------DAVLSADAV--- 144 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh------------------------heeEehhhc---
Confidence 57899999999999999999999999999999999999984310 001111110
Q ss_pred CHHHHHHHHhccCcEEEEecChh--hHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPT--QKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI 719 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~--~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 719 (1010)
....|. -=..+.+.+.-..+.++++||+.+|+.+-+.||+-.
T Consensus 145 -----------------~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 145 -----------------RAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred -----------------CCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 011222 222333333333467999999999999999999853
No 120
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.22 E-value=0.01 Score=65.54 Aligned_cols=108 Identities=16% Similarity=0.109 Sum_probs=74.0
Q ss_pred ecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhh
Q psy3624 578 MIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSIL 657 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 657 (1010)
..+++.+++.+++++|++.|++++++||++...+..+.+.+|+....-. .+.|.+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~------------------------~i~~~~- 238 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD------------------------DLIGRP- 238 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh------------------------hhhCCc-
Confidence 5678999999999999999999999999999999999999988531000 000000
Q ss_pred hcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH-cCCeEEEEcCCccCHHHhhhCCceE
Q psy3624 658 RDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR-LGAIVAVTGDGVNDSPALKKADIGI 719 (1010)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~~l~~A~vgI 719 (1010)
.......... -.+-.|+-+...++.+.. .-..++|+||..+|+.+-+.||+.+
T Consensus 239 ------~~~~~~~~~~---~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 239 ------PDMHFQREQG---DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ------chhhhcccCC---CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0000000000 013345666666665533 3378999999999999999999864
No 121
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.21 E-value=0.01 Score=60.24 Aligned_cols=94 Identities=14% Similarity=0.182 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.++++.|+++|+++.++|+... +....+.+|+...- ..++.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f------------------------~~~~~~~~~--- 137 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF------------------------DAIVDPAEI--- 137 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC------------------------cEEEehhhc---
Confidence 5789999999999999999999998643 45567777774310 011111110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCce
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIG 718 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 718 (1010)
-..+-.|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+-
T Consensus 138 ---------------~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 138 ---------------KKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred ---------------CCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 0011122222222333322234699999999999999999984
No 122
>PLN02580 trehalose-phosphatase
Probab=96.20 E-value=0.051 Score=60.74 Aligned_cols=63 Identities=22% Similarity=0.148 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHc-C-----C-eEEEEcCCccCHHHhhh-----CCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHH
Q psy3624 683 TQKLHIVEGCQRL-G-----A-IVAVTGDGVNDSPALKK-----ADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVE 750 (1010)
Q Consensus 683 ~~K~~iv~~l~~~-g-----~-~v~~iGDg~ND~~~l~~-----A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~ 750 (1010)
-+|...++.+.+. | . .++++||+.||.+||+. +++||+|| ++.+.. .|++.+. +.+.+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~t--~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKES--NAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCCc--cceEEcC--CHHHHHHHHH
Confidence 4899999988653 2 1 25899999999999996 69999999 765543 5778775 4555665553
No 123
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.15 E-value=0.0084 Score=57.72 Aligned_cols=109 Identities=15% Similarity=0.137 Sum_probs=73.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
.++|+-++.++.+++.+++++++|+-...-...+-..++=..+-. ... +.+.....+.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~------------~id----------i~sn~~~ih~ 130 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIY------------CID----------IVSNNDYIHI 130 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccccee------------eeE----------EeecCceEcC
Confidence 588999999999999999999999998888888777665211000 000 0000000000
Q ss_pred CHHHHHHHHhccCcEEEEecCh--hhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEe
Q psy3624 661 TTEQLENVLRTHREIVFARTSP--TQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIA 720 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p--~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 720 (1010)
+. .. .+++...++ .+|...|+.+++..+.+.++|||+.|++|-+.+|+-+|
T Consensus 131 dg--~h-------~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 131 DG--QH-------SIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CC--ce-------eeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 00 00 012222222 57999999999999999999999999999999998885
No 124
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.12 E-value=0.04 Score=55.71 Aligned_cols=27 Identities=33% Similarity=0.576 Sum_probs=25.0
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDH 607 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~ 607 (1010)
.+.|++.+++++|++.|+++.++|..+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999876
No 125
>PLN02423 phosphomannomutase
Probab=96.02 E-value=0.048 Score=58.06 Aligned_cols=39 Identities=21% Similarity=0.141 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEcC----CccCHHHhhh-CCceEeeC
Q psy3624 683 TQKLHIVEGCQRLGAIVAVTGD----GVNDSPALKK-ADIGIAMG 722 (1010)
Q Consensus 683 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~~l~~-A~vgIamg 722 (1010)
.+|+..++.|+ ..+.|+++|| |.||.+||+. --.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 47999999999 7788999999 8999999997 55699885
No 126
>PRK06769 hypothetical protein; Validated
Probab=95.83 E-value=0.028 Score=56.37 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=25.4
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCH
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHP 608 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~ 608 (1010)
++-|++.+++++|++.|+++.++|+.+.
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 3789999999999999999999998763
No 127
>PLN02940 riboflavin kinase
Probab=95.78 E-value=0.027 Score=64.11 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=64.5
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH-HcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAK-AVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+...- ..++.+++.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F------------------------d~ii~~d~v-- 146 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF------------------------SVIVGGDEV-- 146 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC------------------------CEEEehhhc--
Confidence 467999999999999999999999999888877665 56763210 112222110
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCce
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIG 718 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 718 (1010)
-...-.|+-=.++++.+.-..+.++++||+.+|+.+-+.||+.
T Consensus 147 ----------------~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 147 ----------------EKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred ----------------CCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 0111223333344444433456799999999999999999985
No 128
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.77 E-value=0.029 Score=56.72 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.+++|+++|+++.++|+-.... ..+..++|+...- ..++.+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f------------------------~~i~~~~~~--- 136 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF------------------------DVVIFSGDV--- 136 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC------------------------CEEEEcCCC---
Confidence 578999999999999999999999998877 5555557874310 011111110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCce
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIG 718 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 718 (1010)
-...-.|+--..+.+.+......++++||...|+.+-+++|+-
T Consensus 137 ---------------~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 137 ---------------GRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred ---------------CCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 0011122222333333333456799999999999999999873
No 129
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.74 E-value=0.05 Score=57.98 Aligned_cols=85 Identities=18% Similarity=0.199 Sum_probs=60.3
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechh
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVT---AKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSI 656 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 656 (1010)
.++-|++.+.++.+++.|+++.++|+++... +....++.|+.....
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~------------------------------- 165 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE------------------------------- 165 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc-------------------------------
Confidence 4678999999999999999999999998443 345556778753110
Q ss_pred hhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHh
Q psy3624 657 LRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPAL 712 (1010)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l 712 (1010)
+.++.|-....|..-.+.+.+...+++++||..+|....
T Consensus 166 -----------------d~lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 166 -----------------EHLLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred -----------------ceEEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 114444333456666666666566799999999998653
No 130
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.67 E-value=0.044 Score=59.83 Aligned_cols=119 Identities=18% Similarity=0.132 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.|++.|+++.++|+.+......+-+..+...-.. ... ++.+.+.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~---------------------~~~-~v~~~~~--- 198 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQ---------------------GLD-VFAGDDV--- 198 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccC---------------------ceE-EEecccc---
Confidence 578999999999999999999999998888877766553211000 000 1111110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCC--HHHHhhcCEEec
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGS--DVSKQTADMILL 738 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~--~~ak~aAd~vl~ 738 (1010)
-..+-.|+-=..+++.+.-....+++|||+.+|+.+-++||+.+..-..+. +.....+|+++.
T Consensus 199 ---------------~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 199 ---------------PKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred ---------------CCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 001122333344444444445679999999999999999998544321221 111235788774
Q ss_pred C
Q psy3624 739 D 739 (1010)
Q Consensus 739 ~ 739 (1010)
+
T Consensus 264 ~ 264 (286)
T PLN02779 264 C 264 (286)
T ss_pred C
Confidence 3
No 131
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.66 E-value=0.08 Score=66.08 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=33.6
Q ss_pred CCCCcchHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Q psy3624 580 DPPRPAVPDAVAKC-RSAGIRVIMVTGDHPVTAKAIAKAV 618 (1010)
Q Consensus 580 d~l~~~~~~aI~~l-~~aGi~v~~~TGd~~~ta~~ia~~~ 618 (1010)
..+.+++.+++++| ++.|+.|+++|||...+.......+
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 36778999999997 7889999999999999998877543
No 132
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.63 E-value=0.12 Score=55.51 Aligned_cols=49 Identities=22% Similarity=0.332 Sum_probs=39.0
Q ss_pred EEEeecCC----CCcchHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHcCCCC
Q psy3624 574 GLMSMIDP----PRPAVPDAVAKCRSAGIRVIMVTGDHPVT---AKAIAKAVGIIS 622 (1010)
Q Consensus 574 G~i~~~d~----l~~~~~~aI~~l~~aGi~v~~~TGd~~~t---a~~ia~~~gi~~ 622 (1010)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+.-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 55555566 88999999999999999999999987775 455556678764
No 133
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.61 E-value=0.022 Score=57.83 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=34.5
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
++.|++.+.++.|++.|+++.++|+. ..+..+.+.+|+.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 68999999999999999999999997 5677778888874
No 134
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.55 E-value=0.058 Score=54.28 Aligned_cols=28 Identities=21% Similarity=0.268 Sum_probs=25.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCH
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHP 608 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~ 608 (1010)
++.|++.++|++|+++|+++.++|.-+.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3678999999999999999999998764
No 135
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.55 E-value=0.064 Score=55.52 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=33.9
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHcCCC
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVT---AKAIAKAVGII 621 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~t---a~~ia~~~gi~ 621 (1010)
-|.-|++.++++.+++.|++|+++|||+... +..-.++.|+.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 3788999999999999999999999999765 33334456764
No 136
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.27 E-value=0.047 Score=54.53 Aligned_cols=40 Identities=33% Similarity=0.556 Sum_probs=35.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCC-HHHHHHHHHHcCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDH-PVTAKAIAKAVGI 620 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~-~~ta~~ia~~~gi 620 (1010)
.+.+++.+++++|++.|+++.++|+.+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999988 6777777777776
No 137
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.20 E-value=0.034 Score=55.43 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=67.8
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
.++.|++.+.+++|++.|++++++|+.+........+++|+...- ..++.+.+...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f------------------------~~i~~~~~~~~ 131 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF------------------------DEIISSDDVGS 131 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC------------------------SEEEEGGGSSS
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc------------------------ccccccchhhh
Confidence 368899999999999999999999999999999999999985211 01111111100
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI 719 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 719 (1010)
.+-.|+-=..+++.+.-..+.+++|||+..|+.+-+.||+.-
T Consensus 132 ------------------~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 132 ------------------RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp ------------------STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred ------------------hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 011122223334444334567999999999999999998743
No 138
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.12 E-value=0.049 Score=52.97 Aligned_cols=41 Identities=24% Similarity=0.377 Sum_probs=33.4
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCH---------------HHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHP---------------VTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~---------------~ta~~ia~~~gi~ 621 (1010)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 82 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA 82 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence 4789999999999999999999998763 3455566777774
No 139
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.04 E-value=0.061 Score=53.03 Aligned_cols=40 Identities=28% Similarity=0.304 Sum_probs=31.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCC---------------HHHHHHHHHHcCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDH---------------PVTAKAIAKAVGI 620 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~---------------~~ta~~ia~~~gi 620 (1010)
++-|++.+++++|+++|+++.++|.-+ ...+..+.+++|+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl 83 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGI 83 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCC
Confidence 567999999999999999999999852 3345556666666
No 140
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.01 E-value=0.067 Score=56.09 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=37.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIIS 622 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~ 622 (1010)
++.|++.+.+++|++. +++.++|+-....+....+++|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 5789999999999999 9999999999999999899999853
No 141
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.77 E-value=0.091 Score=54.76 Aligned_cols=106 Identities=24% Similarity=0.361 Sum_probs=66.9
Q ss_pred CCCcchHHHHHHH--HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhh
Q psy3624 581 PPRPAVPDAVAKC--RSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILR 658 (1010)
Q Consensus 581 ~l~~~~~~aI~~l--~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 658 (1010)
|+.|+.+++++.+ ++.|+.++++|.-+..-...+-+.-|+...-.+..-. + ...+. ...+.+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TN-------p-a~~~~--~G~l~v~----- 135 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTN-------P-ACFDA--DGRLRVR----- 135 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeC-------C-ceecC--CceEEEe-----
Confidence 6889999999999 5689999999999999999999999985421100000 0 00000 0000000
Q ss_pred cCCHHHHHHHHhccCcEEEEecCh-hhHHHHHHHHHHc----C---CeEEEEcCCccC-HHHhh
Q psy3624 659 DMTTEQLENVLRTHREIVFARTSP-TQKLHIVEGCQRL----G---AIVAVTGDGVND-SPALK 713 (1010)
Q Consensus 659 ~~~~~~~~~~~~~~~~~v~~r~~p-~~K~~iv~~l~~~----g---~~v~~iGDg~ND-~~~l~ 713 (1010)
..... -|.+|.| .-|..+++.+++. | ..|+.+|||.|| +|+++
T Consensus 136 -----------pyh~h-~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 136 -----------PYHSH-GCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred -----------CccCC-CCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 00000 1334544 3699999888654 4 689999999999 45543
No 142
>PRK10444 UMP phosphatase; Provisional
Probab=94.74 E-value=0.43 Score=50.78 Aligned_cols=48 Identities=15% Similarity=0.309 Sum_probs=42.1
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAV---GII 621 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~---gi~ 621 (1010)
|.+.-.+.+-|++.++|++|+++|++++++|+++..+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 666667789999999999999999999999999998888888764 764
No 143
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.74 E-value=0.029 Score=54.63 Aligned_cols=42 Identities=12% Similarity=0.166 Sum_probs=37.7
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
.-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3468999999999999 57999999999999999999998874
No 144
>PRK09449 dUMP phosphatase; Provisional
Probab=94.71 E-value=0.099 Score=54.87 Aligned_cols=40 Identities=13% Similarity=0.258 Sum_probs=35.4
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
++.|++.++++.|+ +|+++.++|......+....+++|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 47899999999999 68999999999888888888888874
No 145
>PLN03017 trehalose-phosphatase
Probab=94.69 E-value=0.79 Score=50.99 Aligned_cols=62 Identities=18% Similarity=0.119 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHc-------CCeEEEEcCCccCHHHhhhC-----CceEeeCCCCCHHHHhhcCEEecCCCchhHHHHH
Q psy3624 683 TQKLHIVEGCQRL-------GAIVAVTGDGVNDSPALKKA-----DIGIAMGITGSDVSKQTADMILLDDNFASIVTGV 749 (1010)
Q Consensus 683 ~~K~~iv~~l~~~-------g~~v~~iGDg~ND~~~l~~A-----~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i 749 (1010)
-+|+..++.+.+. +..++++||...|-.||+.. ++||.+| .... ...|++.+. +.+.+.+++
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG-~~~k--~T~A~y~L~--dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS-KFPK--DTDASYSLQ--DPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC-CCCC--CCcceEeCC--CHHHHHHHH
Confidence 4899999988653 23589999999999999865 5788787 3221 256788874 455666555
No 146
>PLN02811 hydrolase
Probab=94.54 E-value=0.13 Score=53.96 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=27.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHH
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTA 611 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta 611 (1010)
++.|++.+.|+.|++.|+++.++||-+....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999999876543
No 147
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.52 E-value=0.083 Score=49.93 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=34.7
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGD-HPVTAKAIAKAVG 619 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd-~~~ta~~ia~~~g 619 (1010)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777666
No 148
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.40 E-value=0.1 Score=51.09 Aligned_cols=37 Identities=14% Similarity=0.217 Sum_probs=33.0
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAV 618 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~ 618 (1010)
..+++.+.++.|++.|+++.++|+.....+....+..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3478999999999999999999999999988877765
No 149
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.39 E-value=0.099 Score=53.94 Aligned_cols=40 Identities=13% Similarity=0.263 Sum_probs=33.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
++-|++.++++.|+++|+++.++|+-... .....+.+|+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 144 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL 144 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH
Confidence 57799999999999999999999986654 46667777773
No 150
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.23 E-value=0.14 Score=49.19 Aligned_cols=42 Identities=21% Similarity=0.404 Sum_probs=39.1
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
....|+.++-+.+++++|++++++|.-+...+...++.+|++
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 357899999999999999999999999999999999999995
No 151
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.98 E-value=0.49 Score=50.33 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=38.4
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHH--HHHHHcCCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAK--AIAKAVGII 621 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~--~ia~~~gi~ 621 (1010)
|.+.-...+-|++.+++++|+++|+++.++|..+...+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 455556788999999999999999999999996655444 566788885
No 152
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.96 E-value=0.18 Score=64.96 Aligned_cols=137 Identities=15% Similarity=0.158 Sum_probs=87.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
.+-|++.+.+++|+++|+++.++|+.....+....++.|+.... ...++.+.+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-----------------------Fd~iv~~~~~--- 214 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-----------------------FDAIVSADAF--- 214 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-----------------------CCEEEECccc---
Confidence 35789999999999999999999999999999988999984210 0012221111
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc-eEeeC--CCCCHHHHhhcCEEe
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI-GIAMG--ITGSDVSKQTADMIL 737 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIamg--~~~~~~ak~aAd~vl 737 (1010)
-...-.|+-=.+.++.+.-..+.++++||..+|+.+-+.|++ .|++. ....+.....+|+++
T Consensus 215 ---------------~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi 279 (1057)
T PLN02919 215 ---------------ENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR 279 (1057)
T ss_pred ---------------ccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE
Confidence 001112333334444444445679999999999999999998 34343 111223345678888
Q ss_pred cCCCchhHHHHHHHhhhhHHh
Q psy3624 738 LDDNFASIVTGVEEGRLIFDN 758 (1010)
Q Consensus 738 ~~~~~~~i~~~i~~gR~~~~~ 758 (1010)
.+-..-.+..++..|-..+.|
T Consensus 280 ~~l~el~~~~~~~~~~~~~~~ 300 (1057)
T PLN02919 280 KDIGNISLSDILTGGSDATPN 300 (1057)
T ss_pred CChHHCCHHHHHhcCCCCCCC
Confidence 665555566666655444444
No 153
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.94 E-value=0.16 Score=56.62 Aligned_cols=27 Identities=33% Similarity=0.431 Sum_probs=24.9
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCC
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGD 606 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd 606 (1010)
-++.|++.+++++|+++|+++.++|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999999999983
No 154
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=93.37 E-value=0.23 Score=51.59 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=63.4
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC---CCCCCcccHHHHHhhcCCccccCCCCCcceeEEechh
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVG---IISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSI 656 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 656 (1010)
-++.|++.+++++|+++|+++.++|..+....+.+.+..+ +..- +++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~----------------------------f~~-- 143 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY----------------------------FSG-- 143 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh----------------------------cce--
Confidence 4789999999999999999999999998887776665542 2110 000
Q ss_pred hhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEe
Q psy3624 657 LRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIA 720 (1010)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 720 (1010)
.. ...+...-.|+-=..+++.+.-..+.++++||...|+.+=++||+-..
T Consensus 144 -----------~f---d~~~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 144 -----------YF---DTTVGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred -----------EE---EeCcccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 00 000111122333333444443334679999999999999999998543
No 155
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=93.35 E-value=0.28 Score=48.66 Aligned_cols=39 Identities=13% Similarity=0.384 Sum_probs=31.2
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHH------------HHHHHHHHcCC
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPV------------TAKAIAKAVGI 620 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~------------ta~~ia~~~gi 620 (1010)
+-|++.+++++|+++|+++.++|..+.. .+..+.+.+|+
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 3489999999999999999999975542 34566677776
No 156
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.30 E-value=0.9 Score=48.47 Aligned_cols=50 Identities=18% Similarity=0.204 Sum_probs=41.9
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTG---DHPVTAKAIAKAVGIISE 623 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TG---d~~~ta~~ia~~~gi~~~ 623 (1010)
|.+.-.+.+-+++.++|++|+++|++++++|| |+........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44445566777999999999999999999996 888888888899998653
No 157
>PLN02645 phosphoglycolate phosphatase
Probab=92.55 E-value=0.36 Score=53.48 Aligned_cols=48 Identities=21% Similarity=0.358 Sum_probs=40.3
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHcCCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIA---KAVGII 621 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia---~~~gi~ 621 (1010)
|.+.-.+.+-|++.++|++|++.|++++++|+++..+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555666778899999999999999999999999977777776 456764
No 158
>KOG3120|consensus
Probab=92.48 E-value=0.81 Score=46.00 Aligned_cols=119 Identities=21% Similarity=0.308 Sum_probs=72.6
Q ss_pred CCCcchHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 581 PPRPAVPDAVAKCRSAGI-RVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
|+-|+..++|+.+++.|- .++++|--|.--...+.+..|+..- ..++... +. ..+....+.+..
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~----F~~IfTN---Pa---~~da~G~L~v~p----- 148 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL----FSEIFTN---PA---CVDASGRLLVRP----- 148 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH----HHHHhcC---Cc---ccCCCCcEEeec-----
Confidence 788999999999999997 9999999999988888888887420 0000000 00 000000001100
Q ss_pred CCHHHHHHHHhccCcEEEEecChh-hHHHHHHHHHHc----C---CeEEEEcCCccC-HHHhhhCCceEeeCCCC
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPT-QKLHIVEGCQRL----G---AIVAVTGDGVND-SPALKKADIGIAMGITG 725 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~-~K~~iv~~l~~~----g---~~v~~iGDg~ND-~~~l~~A~vgIamg~~~ 725 (1010)
.++..-|.+|.+. -|..++..++.. | +.+..+|||.|| +|+++...--+||-..|
T Consensus 149 -----------yH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkg 212 (256)
T KOG3120|consen 149 -----------YHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKG 212 (256)
T ss_pred -----------CCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCC
Confidence 0000123333332 377777776542 2 379999999999 78887777777775334
No 159
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.63 E-value=0.31 Score=50.56 Aligned_cols=30 Identities=23% Similarity=0.476 Sum_probs=26.2
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHH
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPV 609 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ 609 (1010)
-++.|++.+.+++|+++|+++.++|.....
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 357899999999999999999999987543
No 160
>KOG3040|consensus
Probab=91.37 E-value=0.8 Score=45.47 Aligned_cols=52 Identities=17% Similarity=0.330 Sum_probs=43.4
Q ss_pred EEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH---HcCCCC
Q psy3624 571 RFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAK---AVGIIS 622 (1010)
Q Consensus 571 ~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~---~~gi~~ 622 (1010)
.+-|.+..+|..-|++.+|++.|+.++.+|..+|.-...+-+.+.+ +||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 3559999999999999999999999999999999887766666655 567654
No 161
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=91.34 E-value=1.6 Score=51.21 Aligned_cols=97 Identities=15% Similarity=0.038 Sum_probs=61.7
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKA-VGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
+++++. +.+++.|.+ +++|+-...-++.+|++ +|++.- -|.+++..
T Consensus 111 l~~~a~---~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~V-----------------------------IgTeLev~ 157 (497)
T PLN02177 111 VHPETW---RVFNSFGKR-YIITASPRIMVEPFVKTFLGADKV-----------------------------LGTELEVS 157 (497)
T ss_pred cCHHHH---HHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEE-----------------------------EecccEEC
Confidence 555544 455677855 99999999999999987 898631 01111000
Q ss_pred CHHHHHHHHhccCcEEEEe------cChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeC
Q psy3624 661 TTEQLENVLRTHREIVFAR------TSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMG 722 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r------~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg 722 (1010)
. ...+-.+ +.-++|.+-++..........+.||+.||.+||+.|+.+++++
T Consensus 158 ~-----------~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 158 K-----------SGRATGFMKKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred c-----------CCEEeeeecCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeC
Confidence 0 0001111 2345687777633211122379999999999999999999998
No 162
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.21 E-value=0.83 Score=44.94 Aligned_cols=86 Identities=21% Similarity=0.199 Sum_probs=66.3
Q ss_pred cCCCCcchHHHHHHHHHCCC--eEEEEcCC-------CHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcce
Q psy3624 579 IDPPRPAVPDAVAKCRSAGI--RVIMVTGD-------HPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTT 649 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi--~v~~~TGd-------~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (1010)
++.+.|+..+.+++|++.+. +|+++|-- +...|..+.+.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 46789999999999999987 49999987 4889999999999841
Q ss_pred eEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHc-----CCeEEEEcCC-ccCHHHhhhCC
Q psy3624 650 IVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRL-----GAIVAVTGDG-VNDSPALKKAD 716 (1010)
Q Consensus 650 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-----g~~v~~iGDg-~ND~~~l~~A~ 716 (1010)
..+....|.-..++.+.++.+ -+.++++||- ..|+-|=...|
T Consensus 110 -------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 110 -------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred -------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 022334787777888888765 5679999998 46776655544
No 163
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=91.07 E-value=0.44 Score=53.03 Aligned_cols=91 Identities=8% Similarity=-0.012 Sum_probs=66.8
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH----cCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechh
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKA----VGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSI 656 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 656 (1010)
++.+++.++|++|++.|+...++|.-+...+..+.++ +|+...-
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------------- 78 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------------- 78 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe--------------------------------
Confidence 3578999999999999999999999999999998887 6663210
Q ss_pred hhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHH----HHcCCeEEEEcCCccCHHHhhhCCceEeeC
Q psy3624 657 LRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGC----QRLGAIVAVTGDGVNDSPALKKADIGIAMG 722 (1010)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l----~~~g~~v~~iGDg~ND~~~l~~A~vgIamg 722 (1010)
.+....++.|.+.++.+ .-....++++||...|+.+.+.+...+.+-
T Consensus 79 -------------------~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 79 -------------------DARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred -------------------eEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 11112233444444443 223467999999999999999988877553
No 164
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=90.85 E-value=1.4 Score=42.64 Aligned_cols=103 Identities=19% Similarity=0.226 Sum_probs=67.4
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHH---HHHc-----CCCCCCcccHHHHHhhcCCccccCCCCCcceeE
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAI---AKAV-----GIISEGSETLEDIAKRRRVPVSSLDPRESTTIV 651 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~i---a~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (1010)
|..++++.+..+.++++|++++.+|+|+..-+... .++. +++.. .+
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G--------------------------pv 79 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG--------------------------PV 79 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC--------------------------CE
Confidence 68999999999999999999999999996555433 3333 22210 01
Q ss_pred EechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHc-----CCeEEEEcCCccCHHHhhhCCce
Q psy3624 652 IQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRL-----GAIVAVTGDGVNDSPALKKADIG 718 (1010)
Q Consensus 652 ~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-----g~~v~~iGDg~ND~~~l~~A~vg 718 (1010)
+... +.+...+. ++ +..+-..+.|...++.++.. ....+++|+..+|+.+-+++++.
T Consensus 80 ~~sP-------~~l~~al~--rE-vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 80 LLSP-------DSLFSALH--RE-VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred EECC-------cchhhhhh--cc-ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 1100 00000000 00 34444456799999888764 34688999999999999988875
No 165
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=90.84 E-value=0.41 Score=44.72 Aligned_cols=88 Identities=15% Similarity=0.203 Sum_probs=52.6
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-CCCcccHHHHHhhcCCccccCCCCC---------cce
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII-SEGSETLEDIAKRRRVPVSSLDPRE---------STT 649 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 649 (1010)
+++.+++.+++++++++|+.++++|||+..... ...|+. ......+.+...+.++++....... ...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~---~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~kp~~~~~~~~~dD 99 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE---GNVGKINIHTLPIIILWLNQHNVPYDEIYVGKPWCGHDGFYVDD 99 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh---ccccccchhhHHHHHHHHHHcCCCCceEEeCCCcCCCCCceecc
Confidence 568899999999999999999999999987654 122222 2222344455555666553321111 112
Q ss_pred eEEechhhhcCCHHHHHHHHh
Q psy3624 650 IVIQGSILRDMTTEQLENVLR 670 (1010)
Q Consensus 650 ~~~~g~~~~~~~~~~~~~~~~ 670 (1010)
..+.-+++..++.+++.+++.
T Consensus 100 ~~ir~~~~~~~~~~~~~~~~~ 120 (126)
T TIGR01689 100 RAIRPSEFSSLTYDEINTLTK 120 (126)
T ss_pred hhhCHHHHHhcCHHHHHHHHh
Confidence 234445555666666665553
No 166
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=88.94 E-value=0.94 Score=45.89 Aligned_cols=91 Identities=14% Similarity=0.095 Sum_probs=59.4
Q ss_pred hHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcCCHHHH
Q psy3624 586 VPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDMTTEQL 665 (1010)
Q Consensus 586 ~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 665 (1010)
..+.++.|++. ++..++||.+...+....+..|+..-- ..++.+.+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f------------------------d~i~~~~~~-------- 138 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF------------------------DAVVAADDV-------- 138 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc------------------------eEEEehhhc--------
Confidence 36899999875 899999999999999999999985310 112221111
Q ss_pred HHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE
Q psy3624 666 ENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI 719 (1010)
Q Consensus 666 ~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 719 (1010)
-..+-.|+-=....+.++.....++++||..+|+.+=+.||+-.
T Consensus 139 ----------~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 139 ----------QHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred ----------cCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 00111233333333444333456899999999999999999843
No 167
>PLN02151 trehalose-phosphatase
Probab=88.85 E-value=4.4 Score=45.03 Aligned_cols=63 Identities=21% Similarity=0.171 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHc-C------CeEEEEcCCccCHHHhhhC-----CceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHH
Q psy3624 683 TQKLHIVEGCQRL-G------AIVAVTGDGVNDSPALKKA-----DIGIAMGITGSDVSKQTADMILLDDNFASIVTGVE 750 (1010)
Q Consensus 683 ~~K~~iv~~l~~~-g------~~v~~iGDg~ND~~~l~~A-----~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~ 750 (1010)
-+|+..++.+.+. + ..++++||...|-.||+.. |+||-+| .+.. .-.|++.+. +.+.+.++++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHHH
Confidence 4899999988653 2 2489999999999999853 6778777 3221 226788875 4455555553
No 168
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=88.52 E-value=0.78 Score=47.08 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=27.9
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHH
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAK 612 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~ 612 (1010)
++.|++.+++++|+++|+++.++|.-+.....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~ 115 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT 115 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHH
Confidence 46899999999999999999999998766543
No 169
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=88.32 E-value=0.55 Score=49.07 Aligned_cols=97 Identities=9% Similarity=0.075 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+.++.| ++++.++|+.+...+...-+..|+..--. ..++++.+..
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~-----------------------~~v~~~~~~~-- 139 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP-----------------------DKLFSGYDIQ-- 139 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc-----------------------ceEeeHHhcC--
Confidence 4668999999988 59999999999888888888888843100 0122221110
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEee
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAM 721 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 721 (1010)
-.+-.|+-=..+.+.+.-..+.++++||+.+|+.+=++||+.+..
T Consensus 140 ----------------~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 140 ----------------RWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred ----------------CCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 001122322333333332335699999999999999999987653
No 170
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=88.31 E-value=1.5 Score=44.31 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.+++.+.+++|+ .+++++|+-+...+....+.+|+...- ..++.+.+....
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f------------------------d~i~~~~~~~~~ 136 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF------------------------DGIFCFDTANPD 136 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh------------------------CeEEEeecccCc
Confidence 47789999999997 478999999999999999999984310 001111110000
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI 719 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 719 (1010)
.....-.|+-=..+++.+......++++||...|+.+=+.||+..
T Consensus 137 --------------~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 137 --------------YLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred --------------cCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 000011222223344444434567999999999999999988754
No 171
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=88.23 E-value=2.6 Score=44.70 Aligned_cols=30 Identities=23% Similarity=0.372 Sum_probs=27.1
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHH
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPV 609 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ 609 (1010)
.|.-|++.+..+.+++.|++|+++|||...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 467789999999999999999999999864
No 172
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=87.98 E-value=4.8 Score=43.04 Aligned_cols=45 Identities=20% Similarity=0.379 Sum_probs=39.6
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAV 618 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~ 618 (1010)
|.+.--+.+=|++.++|++|+++|++++++|-.+..+...+++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 788888999999999999999999999999999888877555544
No 173
>PHA02597 30.2 hypothetical protein; Provisional
Probab=87.85 E-value=1.8 Score=44.23 Aligned_cols=92 Identities=12% Similarity=0.125 Sum_probs=55.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++.|++.+++++|++.+ +.+++|..+........+.+|+..-...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~---------------------------------- 118 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG---------------------------------- 118 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC----------------------------------
Confidence 47899999999999985 5666676555444444556665320000
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHH-HHHcC-CeEEEEcCCccCHHHhhhC--Cce
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEG-CQRLG-AIVAVTGDGVNDSPALKKA--DIG 718 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~-l~~~g-~~v~~iGDg~ND~~~l~~A--~vg 718 (1010)
....++.++... .|.+++.. +++.| +.++++||..+|+.+-++| |+-
T Consensus 119 ----------~f~~i~~~~~~~-~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 119 ----------AFSEVLMCGHDE-SKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred ----------cccEEEEeccCc-ccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 000112233222 13344433 33333 4688999999999999999 984
No 174
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=87.42 E-value=1.3 Score=46.47 Aligned_cols=89 Identities=19% Similarity=0.287 Sum_probs=54.7
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhh
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVT---AKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSIL 657 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 657 (1010)
+.-|++.+.++.+++.|++|+++|||+... +..=.++.|....+ .+.+.+..-
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~------------------------~l~lr~~~~ 170 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWD------------------------HLILRPDKD 170 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBS------------------------CGEEEEESS
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccc------------------------hhccccccc
Confidence 566789999999999999999999997552 22334455653211 011111100
Q ss_pred hcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcC-CeEEEEcCCccCHHH
Q psy3624 658 RDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLG-AIVAVTGDGVNDSPA 711 (1010)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~~ 711 (1010)
.. .....+.|....+.+++.| ++++.+||..+|..-
T Consensus 171 ~~------------------~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 171 PS------------------KKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp TS------------------S------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cc------------------cccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 00 0001234778888888885 578889999999865
No 175
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=86.62 E-value=0.48 Score=42.58 Aligned_cols=49 Identities=24% Similarity=0.390 Sum_probs=36.9
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHcCCCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIA---KAVGIIS 622 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia---~~~gi~~ 622 (1010)
|++...+++-|++.++|++|+++|++++++|..+..+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 556667889999999999999999999999998866655555 5667753
No 176
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=86.45 E-value=2.1 Score=42.56 Aligned_cols=100 Identities=20% Similarity=0.246 Sum_probs=59.6
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
.+.+++.+++..++++|.+++|+|--+ ||... ..++.++...
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rg---------------------------yf~~~~f~~~ 72 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRG---------------------------YFTEADFDKL 72 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCC-----------Ccccc---------------------------CccHHHHHHH
Confidence 367899999999999999999999632 33221 0111111111
Q ss_pred CH---HHHHHHHhccCcEEEEecChh--------hHHHHHHHHHHcC---CeEEEEcCCccCHHHhhhCCce
Q psy3624 661 TT---EQLENVLRTHREIVFARTSPT--------QKLHIVEGCQRLG---AIVAVTGDGVNDSPALKKADIG 718 (1010)
Q Consensus 661 ~~---~~~~~~~~~~~~~v~~r~~p~--------~K~~iv~~l~~~g---~~v~~iGDg~ND~~~l~~A~vg 718 (1010)
+. ..+...--+.+.+.+|.-.|+ ....+.+.+++.+ ....+|||...|..+-..|++.
T Consensus 73 ~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 73 HNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred HHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 10 011111112223344444444 3455556666655 6799999999999998888875
No 177
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=86.27 E-value=1.7 Score=45.44 Aligned_cols=98 Identities=15% Similarity=0.201 Sum_probs=72.8
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhc
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRD 659 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 659 (1010)
.++.|++.+.+++|++.|+.+.++|+.+...+..+.+..|+...-. .++++.+.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~------------------------~~v~~~dv-- 138 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD------------------------VIVTADDV-- 138 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc------------------------hhccHHHH--
Confidence 3789999999999999999999999999999999999999865211 12222221
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceE
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGI 719 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 719 (1010)
.-.+-.|+-=....+.|.-....|+++.|+.|.+.+-++||.-+
T Consensus 139 ----------------~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 139 ----------------ARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred ----------------hcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 11123455555555555445567999999999999999999744
No 178
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=86.23 E-value=6.7 Score=42.61 Aligned_cols=48 Identities=17% Similarity=0.297 Sum_probs=36.5
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHH---HHHHcCCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKA---IAKAVGII 621 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~---ia~~~gi~ 621 (1010)
|.+.-.+.+-|++.++|++|+++|++++++|+++..+... -.+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4445567778889999999999999999999987554433 33556774
No 179
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=83.84 E-value=1.8 Score=46.41 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=38.3
Q ss_pred CC-cchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q psy3624 582 PR-PAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIIS 622 (1010)
Q Consensus 582 l~-~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~ 622 (1010)
+| |++.+++++|+++|+++.++|+.....+....+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999999999999999999964
No 180
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=82.08 E-value=16 Score=47.19 Aligned_cols=84 Identities=13% Similarity=0.133 Sum_probs=53.3
Q ss_pred ccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhcc-----CCc-eEE----EeCCeEEEEeCCCccCCcEEEecC
Q psy3624 115 SKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMV-----PQY-ANV----IRDGQKKTILSSELVRGDVVDVKF 184 (1010)
Q Consensus 115 ~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~-----~~~-~~V----~R~g~~~~i~~~~Lv~GDiV~l~~ 184 (1010)
|.+.....+++++.++++.+.++.++++.++..+...+.. ..+ ..+ +.-|....+...|.+|.|.+.++.
T Consensus 128 ~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 128 WIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 3455556666677778888888888877766554343211 111 122 245889999999999999999864
Q ss_pred CCeecccEEEEEeCc
Q psy3624 185 GDRIPADIRIIESHG 199 (1010)
Q Consensus 185 G~~iPaD~~ll~~~~ 199 (1010)
+..=+|=-.|.|++
T Consensus 208 -~~l~VdES~LTGES 221 (941)
T TIGR01517 208 -LSLEIDESSITGES 221 (941)
T ss_pred -CcEEEEecccCCCC
Confidence 33334544555554
No 181
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=81.04 E-value=3.4 Score=40.01 Aligned_cols=90 Identities=27% Similarity=0.358 Sum_probs=60.0
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHH----HHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhh
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPV----TAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSIL 657 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~----ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 657 (1010)
+++-+++.|..=++.|=.++.+|||.+. +++.+|+...|.+.+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~--------------------------------- 161 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN--------------------------------- 161 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc---------------------------------
Confidence 4556677788888999999999999865 445556666664321
Q ss_pred hcCCHHHHHHHHhccCcEEEEecChh-hHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCc-eEee
Q psy3624 658 RDMTTEQLENVLRTHREIVFARTSPT-QKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADI-GIAM 721 (1010)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~v~~r~~p~-~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam 721 (1010)
.++|+...|. .+..-...+|+++ .-..-||+.||+-+-+.|++ ||-+
T Consensus 162 ----------------pv~f~Gdk~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 162 ----------------PVIFAGDKPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred ----------------ceeeccCCCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 2355544441 1222234455554 55688999999999999987 6644
No 182
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=80.78 E-value=8.8 Score=40.46 Aligned_cols=64 Identities=25% Similarity=0.234 Sum_probs=32.7
Q ss_pred EEEEecChhhHHHHHHHHHHc-C------CeEEEEcCCccCHHHhhhC------CceEeeCCCCC-HHHHhhcCEEecC
Q psy3624 675 IVFARTSPTQKLHIVEGCQRL-G------AIVAVTGDGVNDSPALKKA------DIGIAMGITGS-DVSKQTADMILLD 739 (1010)
Q Consensus 675 ~v~~r~~p~~K~~iv~~l~~~-g------~~v~~iGDg~ND~~~l~~A------~vgIamg~~~~-~~ak~aAd~vl~~ 739 (1010)
++=.|..-..|...++.+-+. + ..++++||...|-.|++.. +++|.+| ... .....+|+|-+.+
T Consensus 156 ~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 156 VVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 344555555699999987654 3 3699999999999999874 5688887 443 2334466666554
No 183
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=77.59 E-value=37 Score=35.76 Aligned_cols=49 Identities=18% Similarity=0.331 Sum_probs=38.3
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHH-cCCCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVT---GDHPVTAKAIAKA-VGIIS 622 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~T---Gd~~~ta~~ia~~-~gi~~ 622 (1010)
|++.-.+.+-+++.++|+.++++|++++++| |++.........+ .|+..
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~ 59 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDV 59 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 4555556777899999999999999999998 7777766655555 77753
No 184
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=77.35 E-value=4.1 Score=43.78 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=36.7
Q ss_pred CcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q psy3624 583 RPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIIS 622 (1010)
Q Consensus 583 ~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~ 622 (1010)
.|++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 3999999999999999999999888888899999999964
No 185
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=75.16 E-value=2.4 Score=41.84 Aligned_cols=45 Identities=11% Similarity=0.122 Sum_probs=39.9
Q ss_pred EeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 576 MSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 576 i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
..+.=..||++.+.+++|.+. ..+++.|......|..+...++..
T Consensus 37 ~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 37 IPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 344557999999999999988 999999999999999999998864
No 186
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=75.07 E-value=99 Score=39.80 Aligned_cols=205 Identities=12% Similarity=0.115 Sum_probs=113.3
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHhhhccCCc------eEE----EeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEE
Q psy3624 127 TVCIITGIFSYSQEAKSARIMDSFKNMVPQY------ANV----IRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIE 196 (1010)
Q Consensus 127 ~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~------~~V----~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~ 196 (1010)
++..+......++..++.++++++......- ..+ +.-|....+.+.|.+|-|...++..+ .=+|=-.|.
T Consensus 114 ~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~LT 192 (917)
T COG0474 114 VINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDESALT 192 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEccccc
Confidence 3344444777788877777777766543222 222 34688999999999999999999887 445555666
Q ss_pred eCceEEEeec--ccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCCCC-ch
Q psy3624 197 SHGFKVDNSS--LTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESGDT-PI 273 (1010)
Q Consensus 197 ~~~l~Vdes~--LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~-~l 273 (1010)
|++.-|+-.. .++|..|... ...+.+-....+..|+-..--...|.-+..|+.+..-.-.+ ....... .+
T Consensus 193 GES~pv~K~~~~~~~~~~~~~~----d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~---~~~t~l~~~l 265 (917)
T COG0474 193 GESLPVEKQALPLTKSDAPLGL----DRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKK---EVKTPLQRKL 265 (917)
T ss_pred CCCcchhccccccccccccccC----CccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhcccc---ccCCcHHHHH
Confidence 6664333221 2224444330 11223333344666664444444555566666554333221 1112222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHHH
Q psy3624 274 AKEIHHFMHLISAWAIFLGVTFFFLSFA-LGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAKR 339 (1010)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~~ 339 (1010)
.+....+..+.....+++.+..+..... ....+..++..+++++.-..|..+-++..+....-.++
T Consensus 266 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 266 NKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 3333333333333333333333332122 23456778888999999999999988888877654443
No 187
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=74.97 E-value=91 Score=40.92 Aligned_cols=226 Identities=11% Similarity=0.088 Sum_probs=107.5
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEE--e-CceEEE
Q psy3624 127 TVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIE--S-HGFKVD 203 (1010)
Q Consensus 127 ~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~--~-~~l~Vd 203 (1010)
+++++..+.....-++.+++.+++++ .. .......| ++-|....+...|.+|-|.++++ . ..+-+|
T Consensus 198 ~i~~i~~~~~~~~~~~~~k~~~~L~~-~~------~~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD 266 (1054)
T TIGR01657 198 CIVFMSSTSISLSVYQIRKQMQRLRD-MV------HKPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPCD 266 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hh------cCCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecce
Confidence 34444444555556677777766654 21 12222333 34588999999999999999998 3 335567
Q ss_pred eecccCCCccccccCCCcccccccc---------ccee-----eeeeeeeeeeEeEEEEEc-CCcCchhhhhhcccCCCC
Q psy3624 204 NSSLTGEAEPQARNASESTTIVLEA---------KNLA-----FFSTNAVEGTAKGIVILC-GDNTVMGRIAGLTSGLES 268 (1010)
Q Consensus 204 es~LTGEs~pv~K~~~~~~~~~~~~---------~n~~-----~~Gt~v~~g~~~~~V~~t-G~~T~~g~i~~~~~~~~~ 268 (1010)
=-.+.|+. -+.-....-+..|... ++.+ -.+..+..|+....+... |..+..|...+ .....
T Consensus 267 ~~ll~g~~-~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~--TG~~T 343 (1054)
T TIGR01657 267 SVLLSGSC-IVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVR--TGFST 343 (1054)
T ss_pred EEEEeCcE-EEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEe--CCccc
Confidence 66777742 2222221111111111 1111 123446667654433222 11122222211 11111
Q ss_pred CCCch----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHH
Q psy3624 269 GDTPI----------AKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAK 338 (1010)
Q Consensus 269 ~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~ 338 (1010)
....+ ....++-...++.+.++++++.+++.+..+......+...+...+..+=...|-++++++..+..
T Consensus 344 ~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~ 423 (1054)
T TIGR01657 344 SKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGIN 423 (1054)
T ss_pred cchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHH
Confidence 11122 22233344344343333333333322221111111222222233334445667777777777764
Q ss_pred HhhcccceecchhhhhhcCCceEEEecCCcccccCceEEE
Q psy3624 339 RMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVT 378 (1010)
Q Consensus 339 ~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~ 378 (1010)
. +.-.|.+-+.+|.+-.---|-|+.++.
T Consensus 424 ~------------~~~rL~k~~il~~~~~~ie~lG~v~vi 451 (1054)
T TIGR01657 424 N------------SLARLKKKGIFCTSPFRINFAGKIDVC 451 (1054)
T ss_pred H------------HHHHHHHCCEEEcCcccceecceeeEE
Confidence 3 344556667788887777777777664
No 188
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=74.56 E-value=4.6 Score=42.73 Aligned_cols=28 Identities=11% Similarity=0.134 Sum_probs=23.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHH
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPV 609 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ 609 (1010)
++-|++.+++++|++. +++.++|..+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 5778999999999975 899999886643
No 189
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=74.30 E-value=8.9 Score=45.31 Aligned_cols=39 Identities=18% Similarity=0.434 Sum_probs=31.0
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCH------------HHHHHHHHHcCC
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHP------------VTAKAIAKAVGI 620 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~------------~ta~~ia~~~gi 620 (1010)
+-|++.+++++|+++|++++++|.-.. ..+..+.+++|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999998655 235555666665
No 190
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=73.06 E-value=71 Score=32.85 Aligned_cols=23 Identities=13% Similarity=0.337 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCC
Q psy3624 974 WWLPAVPFAIVIFIYDECRRFWLRTHP 1000 (1010)
Q Consensus 974 ~wl~~l~~~~~~l~~~e~~K~~~r~~~ 1000 (1010)
.|...++ +++.+.. +.+++|||.
T Consensus 180 ~~~~iii-g~i~~~~---~~~lkkk~~ 202 (206)
T PF06570_consen 180 PWVYIII-GVIAFAL---RFYLKKKYN 202 (206)
T ss_pred HHHHHHH-HHHHHHH---HHHHHHHhC
Confidence 4554433 4433333 356666664
No 191
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=69.46 E-value=24 Score=37.70 Aligned_cols=144 Identities=18% Similarity=0.227 Sum_probs=79.6
Q ss_pred ecCCCCcchHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCC--CCCCc--------------------ccHHHHHhh
Q psy3624 578 MIDPPRPAVPDAVAKCRSA-GIRVIMVTGDHPVTAKAIAKAVGI--ISEGS--------------------ETLEDIAKR 634 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~a-Gi~v~~~TGd~~~ta~~ia~~~gi--~~~~~--------------------~~~~~~~~~ 634 (1010)
....+.++..+.+++|.+. ...++++|||+.........-.|+ ..++. .+..++.+.
T Consensus 37 ~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~ 116 (266)
T COG1877 37 EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAI 116 (266)
T ss_pred cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHH
Confidence 4457889999999999987 557999999999999887773333 22111 000111111
Q ss_pred c-----CCccccCCCCCcceeEEechhhhcCCHH--HHHHH----------HhccCcEEEEecChhhHHHHHHHHHH-c-
Q psy3624 635 R-----RVPVSSLDPRESTTIVIQGSILRDMTTE--QLENV----------LRTHREIVFARTSPTQKLHIVEGCQR-L- 695 (1010)
Q Consensus 635 ~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~----------~~~~~~~v~~r~~p~~K~~iv~~l~~-~- 695 (1010)
. ..+-..+..++ ..+.+.=......... ..... ....+.+|.+|.+-..|+..++.+.+ .
T Consensus 117 l~~~v~r~pGs~iE~K~-~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~ 195 (266)
T COG1877 117 LEYYVERTPGSYIERKG-FAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELP 195 (266)
T ss_pred HHHHhhcCCCeEEEEcC-cEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCC
Confidence 1 11111111111 1111110000000000 00000 01234457778777789999996544 3
Q ss_pred --CCeEEEEcCCccCHHHhhhCC----ceEeeC
Q psy3624 696 --GAIVAVTGDGVNDSPALKKAD----IGIAMG 722 (1010)
Q Consensus 696 --g~~v~~iGDg~ND~~~l~~A~----vgIamg 722 (1010)
|..+++.||...|-.||+..+ .+|-+|
T Consensus 196 ~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 196 FDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred CCCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 335999999999999999987 455555
No 192
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=68.05 E-value=11 Score=39.44 Aligned_cols=42 Identities=12% Similarity=0.226 Sum_probs=36.5
Q ss_pred CCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q psy3624 580 DPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIIS 622 (1010)
Q Consensus 580 d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~ 622 (1010)
-++-+++.++++++++. .++.++|--....+....+++||..
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 36778899999999999 9999999988888889999999743
No 193
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=62.06 E-value=12 Score=37.15 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=28.3
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
++.|++.++++ ++.++|.-+........+..|+.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~ 123 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLP 123 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCH
Confidence 47788988888 37899999988888888888884
No 194
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=59.80 E-value=48 Score=34.37 Aligned_cols=42 Identities=12% Similarity=0.178 Sum_probs=33.9
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHH----HHHHHHHcCCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVT----AKAIAKAVGIIS 622 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~t----a~~ia~~~gi~~ 622 (1010)
.+-||+.+.++...+.|..|..+|-|.... +..-.++.|+..
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~ 167 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQ 167 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccc
Confidence 567899999999999999999999998665 444455667754
No 195
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=57.51 E-value=30 Score=45.35 Aligned_cols=102 Identities=11% Similarity=0.023 Sum_probs=55.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhccccccccchhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhcc-C-
Q psy3624 78 WVILLKHLFEGFSVLLWTGAVLCFIAYLIEFHISEDASKDNLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMV-P- 155 (1010)
Q Consensus 78 ~~~~~~~l~~~f~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~-~- 155 (1010)
++.+++||..++++.+++.+++.++...-+. .+. ..+.+.++++++..+...++.++++++++..+.-.-.+ .
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-~~~----t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~ 92 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVPILSPT-YRG----TSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEG 92 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-Ccc----HhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECC
Confidence 4456667777776666666666665321111 111 13345555555666666677777776666654433221 1
Q ss_pred -Cc-----eEEEeCCeEEEEeCCCccCCcEEEecC
Q psy3624 156 -QY-----ANVIRDGQKKTILSSELVRGDVVDVKF 184 (1010)
Q Consensus 156 -~~-----~~V~R~g~~~~i~~~~Lv~GDiV~l~~ 184 (1010)
.. ..=++-|....+...|.+|-|++.++.
T Consensus 93 ~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~s 127 (1057)
T TIGR01652 93 HGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSS 127 (1057)
T ss_pred CCcEEEeeeecccCCCEEEEcCCCcccceEEEEec
Confidence 01 111234666667777777777777764
No 196
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=55.58 E-value=1.8e+02 Score=27.23 Aligned_cols=46 Identities=17% Similarity=0.275 Sum_probs=30.3
Q ss_pred EEEecChhhHHHHHHHHHHcCCeEEEEcCCcc--CHHHhhhCCceEeeC
Q psy3624 676 VFARTSPTQKLHIVEGCQRLGAIVAVTGDGVN--DSPALKKADIGIAMG 722 (1010)
Q Consensus 676 v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~N--D~~~l~~A~vgIamg 722 (1010)
++++..+.-..++++.+ .+-+.+...|-|.| |.+++++-||-++=.
T Consensus 42 ii~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 42 IIVGSGTPLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EEESTTSTBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEEcCCCCcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 55555553334555665 34457888899988 899999999988754
No 197
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=55.37 E-value=18 Score=30.19 Aligned_cols=54 Identities=17% Similarity=0.112 Sum_probs=34.9
Q ss_pred HHHHHHHHHHcCCeEEEEcCC-ccCHHHhhhCCc-eEeeC--CCCCHHHH---hhcCEEec
Q psy3624 685 KLHIVEGCQRLGAIVAVTGDG-VNDSPALKKADI-GIAMG--ITGSDVSK---QTADMILL 738 (1010)
Q Consensus 685 K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~v-gIamg--~~~~~~ak---~aAd~vl~ 738 (1010)
-..+.+.+......++||||. ..|+.+=+++++ +|.+. ....+... ..+|+|+.
T Consensus 10 ~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 10 LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 334444444345679999999 999999999997 44443 22223332 46788875
No 198
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=54.34 E-value=66 Score=33.88 Aligned_cols=44 Identities=11% Similarity=0.200 Sum_probs=34.2
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEG 624 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~ 624 (1010)
.+|+++.+.++.|++.+|.+.++|+-=......+.++-|...++
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N 133 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN 133 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC
Confidence 68999999999999999999999998888888888888776554
No 199
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=54.14 E-value=3.2e+02 Score=35.19 Aligned_cols=233 Identities=9% Similarity=0.056 Sum_probs=110.9
Q ss_pred hhhhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccC------------CceEE----EeCCeEEEEeCCCccCCcEEE
Q psy3624 118 NLWLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVP------------QYANV----IRDGQKKTILSSELVRGDVVD 181 (1010)
Q Consensus 118 ~~~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~------------~~~~V----~R~g~~~~i~~~~Lv~GDiV~ 181 (1010)
.....+++++..++.. +..++..++.++++++..... +...| +.-|....+...|.+|-|.+.
T Consensus 114 ~~iI~~~v~l~~~i~~-~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~l 192 (903)
T PRK15122 114 VIIILTMVLLSGLLRF-WQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRL 192 (903)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEE
Confidence 3334444444444444 444455566566666543221 11222 235889999999999999998
Q ss_pred ecCCCeecccEEEEEeCceEEEeeccc------------CCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEE
Q psy3624 182 VKFGDRIPADIRIIESHGFKVDNSSLT------------GEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVIL 249 (1010)
Q Consensus 182 l~~G~~iPaD~~ll~~~~l~Vdes~LT------------GEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~ 249 (1010)
++..+ +=+|=-.|.|++.-|+-...+ |+..+. .+ ..+.+-....+..|+....-...|-=++
T Consensus 193 i~g~~-l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~----~~-~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 193 IESRD-LFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSL----LD-LPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred EEcCc-eEEEccccCCCCcceeeeccccccccccccccccccCCc----cc-ccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 87543 345655666766445444321 222111 11 1112222334555654433222232233
Q ss_pred cCCcCchhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHH
Q psy3624 250 CGDNTVMGRIAGLTSGLESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATV 329 (1010)
Q Consensus 250 tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~ 329 (1010)
.|.=...-+-.+.....+.+..++.+.+..+..+++++.++++.+. ..-+...+..++..+++....+.|..+++++
T Consensus 267 ~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~---~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 267 FGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT---KGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred hhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc---cCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3321111000000011111123345555555555544443333221 1112234455677778888888898888888
Q ss_pred HHHHHHHHH------------HhhcccceecchhhhhhcCCce
Q psy3624 330 TVCLSLTAK------------RMASKNCVVKHLEAVETLGSTS 360 (1010)
Q Consensus 330 ~~~~~~~~~------------~l~~~~ilvk~~~~~e~lg~v~ 360 (1010)
..+....++ .|.+-.++|-+-.--=+-|+++
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~ 386 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRII 386 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEE
Confidence 876544333 3344555664444333344444
No 200
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=52.76 E-value=2.9e+02 Score=35.56 Aligned_cols=208 Identities=10% Similarity=0.020 Sum_probs=98.1
Q ss_pred hhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccC-----CceEEE-----eCCeEEEEeCCCccCCcEEEecCCCeeccc
Q psy3624 122 GIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVP-----QYANVI-----RDGQKKTILSSELVRGDVVDVKFGDRIPAD 191 (1010)
Q Consensus 122 ~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~-----~~~~V~-----R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD 191 (1010)
.+++++.++++.+-++ +..++.+.+.++..... .+...+ .-|....+...|.+|-|.+.++..+ .=+|
T Consensus 87 ~~~i~~~~~i~~~qe~-~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~-l~VD 164 (884)
T TIGR01522 87 TLAILIVVTVGFVQEY-RSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD-LSID 164 (884)
T ss_pred HhHHHHHHHHHHHHHH-HHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc-eEEE
Confidence 3334444445544444 55566666666533211 112222 3488999999999999999997543 3356
Q ss_pred EEEEEeCceEEEeecc--cCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCCCCC
Q psy3624 192 IRIIESHGFKVDNSSL--TGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGLESG 269 (1010)
Q Consensus 192 ~~ll~~~~l~Vdes~L--TGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 269 (1010)
=-.+.|++.-|+-..- .++.. ....+ ..+.+-....+..|+...--...|.=+..|.-. +..+.....+..
T Consensus 165 ES~LTGES~pv~K~~~~~~~~~~---~~~~~-~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~---~~v~~~~~~kt~ 237 (884)
T TIGR01522 165 ESNLTGETTPVSKVTAPIPAATN---GDLAE-RSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVF---KMMQAIEKPKTP 237 (884)
T ss_pred cccccCCCcceeccccccccccc---ccccc-cCceEEeCCEEEeeeEEEEEEEecCccHHHHHH---HHhccCCCCCCc
Confidence 6666666643333221 11110 00011 111122223345555433222233333334211 222222222222
Q ss_pred CCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHH
Q psy3624 270 DTP-IAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAK 338 (1010)
Q Consensus 270 ~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~ 338 (1010)
... +.+....+....+.++.++.++.++....+...+..++..+++....+.|.++++++..+.....+
T Consensus 238 lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak 307 (884)
T TIGR01522 238 LQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSK 307 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhh
Confidence 222 333333343333222222222223222222234455666777888888999999988888765543
No 201
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=52.65 E-value=1.8e+02 Score=37.86 Aligned_cols=201 Identities=9% Similarity=0.004 Sum_probs=100.3
Q ss_pred hhhhhhhHhHHHHHHHHHHHHHHHHhhhcc-----CCc-eEE----EeCCeEEEEeCCCccCCcEEEecCCCeecccEEE
Q psy3624 125 LVTVCIITGIFSYSQEAKSARIMDSFKNMV-----PQY-ANV----IRDGQKKTILSSELVRGDVVDVKFGDRIPADIRI 194 (1010)
Q Consensus 125 l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~-----~~~-~~V----~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~l 194 (1010)
++++..+......++..++.+.+.++.... ..+ ..| +.-|....+...|.+|.|.+.++..+ +=+|=-.
T Consensus 113 vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~ 191 (997)
T TIGR01106 113 VVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSS 191 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccc
Confidence 333344445566666667766666653221 111 111 24588999999999999999988653 3355555
Q ss_pred EEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccCC-CCCCCch
Q psy3624 195 IESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSGL-ESGDTPI 273 (1010)
Q Consensus 195 l~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~l 273 (1010)
|.|++.-|.-..-..+..|. +. .+.+-....+..|+...--...|.=+..|.-.. +.+..... ..-...+
T Consensus 192 LTGES~pv~K~~~~~~~~~~-----~~-~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~---~~~~~~~~~~pl~~~~ 262 (997)
T TIGR01106 192 LTGESEPQTRSPEFTHENPL-----ET-RNIAFFSTNCVEGTARGIVVNTGDRTVMGRIAS---LASGLENGKTPIAIEI 262 (997)
T ss_pred cCCCCCceeccCCCcccCcc-----cc-CCeEEeccEeeeeeEEEEEEEccccchhhHHHh---hhhhcccCCCcHHHHH
Confidence 66665333322111011121 11 111222223455553322222333344443332 11111111 1112345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHH
Q psy3624 274 AKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSL 335 (1010)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~ 335 (1010)
.+..+.+....+.+++++.++.++....+...+..++..+++.+..++|..+++++..+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 263 EHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 55566666655555444444433333333334455566667778888899998888876553
No 202
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=51.77 E-value=3.4e+02 Score=34.81 Aligned_cols=232 Identities=8% Similarity=0.052 Sum_probs=108.9
Q ss_pred hhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCc------------eEE----EeCCeEEEEeCCCccCCcEEEecCC
Q psy3624 122 GIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQY------------ANV----IRDGQKKTILSSELVRGDVVDVKFG 185 (1010)
Q Consensus 122 ~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~------------~~V----~R~g~~~~i~~~~Lv~GDiV~l~~G 185 (1010)
.+++++..++..+.++..+ |+.++++++....... ..| +.-|....+...|.+|-|.+.++..
T Consensus 95 ~~iv~~~~~i~~~~e~~a~-ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~ 173 (867)
T TIGR01524 95 ALMVLASGLLGFIQESRAE-RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISAR 173 (867)
T ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecC
Confidence 3344444555555565554 6666666664332221 122 2358899999999999999988743
Q ss_pred CeecccEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeeeeEeEEEEEcCCcCchhhhhhcccC
Q psy3624 186 DRIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEGTAKGIVILCGDNTVMGRIAGLTSG 265 (1010)
Q Consensus 186 ~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 265 (1010)
-+=+|=-.+.|++.-|+-.. |...+......+. .+.+-....+..|.....-...|.=+..|.-... +.. .+.
T Consensus 174 -~l~VDES~LTGES~PV~K~~--~~~~~~~~~~~~~-~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~--v~~-~~~ 246 (867)
T TIGR01524 174 -DLFINQSALTGESLPVEKFV--EDKRARDPEILER-ENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIA--ATE-RRG 246 (867)
T ss_pred -ceEEEcccccCCCCcccccC--Ccccccccccccc-ccceecCCeEEEeEEEEEEEEEcCccHHHHHHHH--hhC-CCC
Confidence 34456666777764343322 1111101111111 1122223345555544332233333333321111 111 111
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHH--------
Q psy3624 266 LESGDTPIAKEIHHFMHLISAWAIFLGVTFFFLSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTA-------- 337 (1010)
Q Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~-------- 337 (1010)
..+-...+.+....+......+++++.++..+....+...+..++..+++....+.|..+++++..+.....
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~ 326 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKE 326 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEcc
Confidence 111111222223333333322222222222222222223455667778888888899999888888764332
Q ss_pred ----HHhhcccceecchhhhhhcCCceE
Q psy3624 338 ----KRMASKNCVVKHLEAVETLGSTST 361 (1010)
Q Consensus 338 ----~~l~~~~ilvk~~~~~e~lg~v~~ 361 (1010)
..|.+-.++|-+-.-.=+-|+.++
T Consensus 327 l~aiE~lg~v~vic~DKTGTLT~~~m~v 354 (867)
T TIGR01524 327 LSAIQNFGAMDILCTDKTGTLTQDKIEL 354 (867)
T ss_pred chhhhhccCccEEEecCCCccccCeEEE
Confidence 334455566655444444444443
No 203
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=48.93 E-value=1.2e+02 Score=38.29 Aligned_cols=67 Identities=12% Similarity=0.176 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCc-eEEEeecccCCCc
Q psy3624 136 SYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHG-FKVDNSSLTGEAE 212 (1010)
Q Consensus 136 ~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~-l~Vdes~LTGEs~ 212 (1010)
....-.+..++.+.++++..... ....+ ++-|....+...|.+|-|.++++.++ +-+|=-.+.|+..
T Consensus 69 ~~i~~~qe~~a~~~~~~L~~~~~------~~~~V----~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~ 136 (755)
T TIGR01647 69 ATIGFIEENKAGNAVEALKQSLA------PKARV----LRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYI 136 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCC------CeEEE----EECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCce
Confidence 33444555666666666542211 11111 23477889999999999999998655 4466666666643
No 204
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=48.05 E-value=3.1e+02 Score=33.93 Aligned_cols=85 Identities=15% Similarity=0.118 Sum_probs=56.3
Q ss_pred hhhhhhhhhhhhhhHhHHHHHHHHHHH-HHHHHhhhccCCceEEEeCCeEEEEeCCCccCCc-EEEecCCCeecccEEEE
Q psy3624 118 NLWLGIVLVTVCIITGIFSYSQEAKSA-RIMDSFKNMVPQYANVIRDGQKKTILSSELVRGD-VVDVKFGDRIPADIRII 195 (1010)
Q Consensus 118 ~~~~~~~l~~v~~i~~~~~~~~~~k~~-~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GD-iV~l~~G~~iPaD~~ll 195 (1010)
.+...+.+.++++++.+++.+.|.+++ |..+.++++..- +......+ ++-|. ...+...+..|-|.+++
T Consensus 61 ~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l-----~~~~~a~v----ir~g~~~~~V~~~eL~~GDiV~v 131 (679)
T PRK01122 61 PAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGA-----KKDTFARK----LREPGAAEEVPATELRKGDIVLV 131 (679)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEE----EECCCEEEEEEHHHcCCCCEEEE
Confidence 445677888888889889888887766 556666665422 22111111 22355 67888999999999999
Q ss_pred EeCc-eEEEeecccCCC
Q psy3624 196 ESHG-FKVDNSSLTGEA 211 (1010)
Q Consensus 196 ~~~~-l~Vdes~LTGEs 211 (1010)
+.++ +-+|=-.+.|+.
T Consensus 132 ~~Gd~IPaDG~vieG~a 148 (679)
T PRK01122 132 EAGEIIPADGEVIEGVA 148 (679)
T ss_pred cCCCEEEEEEEEEEccE
Confidence 8665 446666667753
No 205
>PTZ00445 p36-lilke protein; Provisional
Probab=46.92 E-value=34 Score=34.90 Aligned_cols=76 Identities=11% Similarity=0.081 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhccCcEEEEeeeccCCCCCCC-CCcCCCCCCCCCCCCcEEEEEEeecCCCCcchHHHHHHHHHCCCeE
Q psy3624 522 RHEVEEILEQLGNYGERVLGFCDYALPPAKFPA-GFELKSDPPNFPLTGLRFLGLMSMIDPPRPAVPDAVAKCRSAGIRV 600 (1010)
Q Consensus 522 ~~~~~~~~~~~~~~G~rvl~~a~~~l~~~~~~~-~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v 600 (1010)
++......+.+.+.|.|++++-.-.---..... +.+. .. ....+-..++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~--------~~-----~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDP--------DN-----DDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCC--------Cc-----chhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 445566777889999999887321000000000 0000 00 011122358999999999999999999
Q ss_pred EEEcCCCHHH
Q psy3624 601 IMVTGDHPVT 610 (1010)
Q Consensus 601 ~~~TGd~~~t 610 (1010)
+++|=-...+
T Consensus 95 ~VVTfSd~~~ 104 (219)
T PTZ00445 95 SVVTFSDKEL 104 (219)
T ss_pred EEEEccchhh
Confidence 9999766544
No 206
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.64 E-value=75 Score=34.66 Aligned_cols=160 Identities=18% Similarity=0.212 Sum_probs=85.1
Q ss_pred ecCCCCcchHHHHHHHHHCCCeE---EEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHHHHh----hcC
Q psy3624 578 MIDPPRPAVPDAVAKCRSAGIRV---IMVTGDHPVTA------KAIAKAVGIISEGS--------ETLEDIAK----RRR 636 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~aGi~v---~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~~~~----~~~ 636 (1010)
+.++++++.++.++++++.|++. ++.-||++... ...|+++||..... +.+.+..+ +..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 34678889999999999888763 56678776654 33567788864211 11222111 111
Q ss_pred CccccC-CC--CCcc-----eeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCC-
Q psy3624 637 VPVSSL-DP--REST-----TIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDG- 705 (1010)
Q Consensus 637 ~~~~~~-~~--~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg- 705 (1010)
++-... .+ .... ..+--..+.+.++...+.++....+ .|.-|+|..-.++++...- .|+.|+++|-|
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~--~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ 169 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRD--VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN 169 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCC--CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 110000 00 0000 0011111222233333333333322 4667888877777776643 48999999997
Q ss_pred ccC---HHHhhhCCceEeeCCCCC---HHHHhhcCEEecC
Q psy3624 706 VND---SPALKKADIGIAMGITGS---DVSKQTADMILLD 739 (1010)
Q Consensus 706 ~ND---~~~l~~A~vgIamg~~~~---~~ak~aAd~vl~~ 739 (1010)
.-= +.+|..+|..+.+-.+.+ ..+-..||+|+.-
T Consensus 170 ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 170 IVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred ccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 333 445777777776541211 2234568998853
No 207
>PRK11507 ribosome-associated protein; Provisional
Probab=46.15 E-value=25 Score=28.95 Aligned_cols=26 Identities=27% Similarity=0.273 Sum_probs=23.2
Q ss_pred EEEeCCeEEEEeCCCccCCcEEEecC
Q psy3624 159 NVIRDGQKKTILSSELVRGDVVDVKF 184 (1010)
Q Consensus 159 ~V~R~g~~~~i~~~~Lv~GDiV~l~~ 184 (1010)
.|..||+.+.-.-+.|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999999999999999999854
No 208
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.43 E-value=59 Score=34.99 Aligned_cols=158 Identities=15% Similarity=0.214 Sum_probs=84.1
Q ss_pred cCCCCcchHHHHHHHHHCCCe----EEEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHH----HHhhcC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIR----VIMVTGDHPVTA------KAIAKAVGIISEGS--------ETLED----IAKRRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~----v~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~----~~~~~~ 636 (1010)
.++++++.++.++++++.|.+ .++.-||++.+. ...|+++|+..+.. +.+.+ +.++.+
T Consensus 11 A~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~ 90 (278)
T PRK14172 11 ALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNN 90 (278)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 456788888999999887742 466788877654 44577888864211 11111 122221
Q ss_pred CccccCC-C--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSSLD-P--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~~~-~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-...+ + ... ...+--..+.+.++...+.++....+ .|.-|+|..-.++++..+- .|+.|+.+|.+.
T Consensus 91 V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~--~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~ 168 (278)
T PRK14172 91 VHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKGEK--CFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSN 168 (278)
T ss_pred CCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCCCC--CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCc
Confidence 1111000 0 000 00011111222233333334433323 4677888888888877643 589999999986
Q ss_pred c----CHHHhhhCCceEeeCCCCCH---HHHhhcCEEec
Q psy3624 707 N----DSPALKKADIGIAMGITGSD---VSKQTADMILL 738 (1010)
Q Consensus 707 N----D~~~l~~A~vgIamg~~~~~---~ak~aAd~vl~ 738 (1010)
. =+.||.+.|..|.+--+-+. ..-..||+++.
T Consensus 169 ~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIs 207 (278)
T PRK14172 169 IVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVV 207 (278)
T ss_pred cchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 5 24466666655555412222 22346899885
No 209
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=44.97 E-value=36 Score=33.70 Aligned_cols=41 Identities=22% Similarity=0.422 Sum_probs=31.8
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEc-CCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVT-GDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~T-Gd~~~ta~~ia~~~gi~ 621 (1010)
.+-|+++++++.|++.|+++.++| -+.+.-|+.+.+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 578999999999999999999999 57899999999999997
No 210
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.83 E-value=51 Score=35.91 Aligned_cols=158 Identities=13% Similarity=0.188 Sum_probs=82.0
Q ss_pred cCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHH------HHHHHHHcCCCCCCc--------ccHHHHH----hhcC
Q psy3624 579 IDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVT------AKAIAKAVGIISEGS--------ETLEDIA----KRRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~t------a~~ia~~~gi~~~~~--------~~~~~~~----~~~~ 636 (1010)
..+++++.++.++.+++. |++ .++.-||++.. -...|+++||..+.. +.+.... ++.+
T Consensus 11 a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~ 90 (296)
T PRK14188 11 AADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPA 90 (296)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 456778888999999876 665 35566776554 345677889864211 1111111 1111
Q ss_pred CccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-... .+ ... ...+--..+.+.++...+-++....+ .|.-|+|..-.++++...- .|..|+++|-+.
T Consensus 91 V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~ 168 (296)
T PRK14188 91 IHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGET--ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN 168 (296)
T ss_pred CcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCC--CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc
Confidence 111000 00 000 00011112222233333333333322 4677888877777776532 588999999543
Q ss_pred c-C---HHHhhhCCceEeeCCC---CCHHHHhhcCEEec
Q psy3624 707 N-D---SPALKKADIGIAMGIT---GSDVSKQTADMILL 738 (1010)
Q Consensus 707 N-D---~~~l~~A~vgIamg~~---~~~~ak~aAd~vl~ 738 (1010)
. = +.+|..++..+.+-.+ ..+.+...||+|+.
T Consensus 169 ~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 169 LVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred chHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 3 2 4457777777765411 22334457898885
No 211
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.46 E-value=61 Score=34.99 Aligned_cols=160 Identities=13% Similarity=0.222 Sum_probs=83.0
Q ss_pred ecCCCCcchHHHHHHHHHCCCe---EEEEcCCCHHHH------HHHHHHcCCCCCC------c--ccHHHHH----hhcC
Q psy3624 578 MIDPPRPAVPDAVAKCRSAGIR---VIMVTGDHPVTA------KAIAKAVGIISEG------S--ETLEDIA----KRRR 636 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~aGi~---v~~~TGd~~~ta------~~ia~~~gi~~~~------~--~~~~~~~----~~~~ 636 (1010)
+.++++++.++.++.+++.|++ .++..||++... ...|+++|+..+. . +.+.+.. ++..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKT 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456788899999999988875 567788887654 4467788886421 1 1122211 1211
Q ss_pred CccccCC-C--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSSLD-P--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~~~-~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-...+ + ... ...+--..+.+.++...+.++....+ -|.-|+|..-.++++...- .|+.|+.+|-|.
T Consensus 90 V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~~~--~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~ 167 (284)
T PRK14170 90 IHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIGKD--SFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSN 167 (284)
T ss_pred CCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 1110000 0 000 00011112222333333334433323 4677888877777776542 588999999985
Q ss_pred c----CHHHhhhCCceEeeCCCCC-H--HHHhhcCEEecC
Q psy3624 707 N----DSPALKKADIGIAMGITGS-D--VSKQTADMILLD 739 (1010)
Q Consensus 707 N----D~~~l~~A~vgIamg~~~~-~--~ak~aAd~vl~~ 739 (1010)
. =+.||...|..|.+--+.+ + ..-..||+++.-
T Consensus 168 iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 168 IVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVA 207 (284)
T ss_pred cchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 4 2445554444443321222 2 233568988853
No 212
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.48 E-value=69 Score=34.64 Aligned_cols=158 Identities=18% Similarity=0.246 Sum_probs=84.2
Q ss_pred cCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHHHH----hhcC
Q psy3624 579 IDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEGS--------ETLEDIA----KRRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~~~----~~~~ 636 (1010)
...++++.++.++.+++. |++ .++..||++... ...|+++|+..+.. +.+.+.. ++..
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 89 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPD 89 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCc
Confidence 346778888999999877 775 456688877644 44677888865211 1122221 1211
Q ss_pred Ccccc-CCC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSS-LDP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~-~~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-.. ..+ ... ...+-...+.+.++...+.++....+ -|.-|+|..-.++++..+- .|+.++.+|.+.
T Consensus 90 V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~--~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~ 167 (286)
T PRK14184 90 IDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLP--GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSN 167 (286)
T ss_pred CceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc
Confidence 11100 000 000 00111112233333344444443333 4677888877777777643 488999999985
Q ss_pred c----CHHHhhh------CCceEeeCCCCCH--HHHhhcCEEecC
Q psy3624 707 N----DSPALKK------ADIGIAMGITGSD--VSKQTADMILLD 739 (1010)
Q Consensus 707 N----D~~~l~~------A~vgIamg~~~~~--~ak~aAd~vl~~ 739 (1010)
. =+.||.. |.|-++-. +..+ ..-..||+++..
T Consensus 168 iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 168 IVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVA 211 (286)
T ss_pred cchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 4 2345544 55666554 3332 234578998853
No 213
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=43.24 E-value=1.9e+02 Score=36.55 Aligned_cols=38 Identities=8% Similarity=0.047 Sum_probs=31.8
Q ss_pred CCcchHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcC
Q psy3624 582 PRPAVPDAVAKCRSA-GIRVIMVTGDHPVTAKAIAKAVG 619 (1010)
Q Consensus 582 l~~~~~~aI~~l~~a-Gi~v~~~TGd~~~ta~~ia~~~g 619 (1010)
+.++..+++++|.+. +..|+++|||+..+.......++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 677899999999865 78999999999999988776543
No 214
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=42.76 E-value=93 Score=34.52 Aligned_cols=48 Identities=21% Similarity=0.288 Sum_probs=38.6
Q ss_pred EEEeecCCCCcchHHHHHHHHHC----CCeEEEEcCCC---HHH-HHHHHHHcCCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSA----GIRVIMVTGDH---PVT-AKAIAKAVGII 621 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~a----Gi~v~~~TGd~---~~t-a~~ia~~~gi~ 621 (1010)
|++.-.+++-+++.++++.|++. |+++..+|-.. ..+ +..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 77777889999999999999999 99999999654 443 45555778874
No 215
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.64 E-value=61 Score=35.26 Aligned_cols=160 Identities=16% Similarity=0.212 Sum_probs=83.0
Q ss_pred cCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHH----HHhhcC
Q psy3624 579 IDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEGS--------ETLED----IAKRRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~----~~~~~~ 636 (1010)
.++++++.++.++.+++. |++ .++..||++... ...|+++|+..+.. +.+.+ ..++..
T Consensus 10 A~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (295)
T PRK14174 10 SLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPD 89 (295)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 456788889999999877 665 467788876654 44677888864211 11111 112211
Q ss_pred Ccccc-CCC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSS-LDP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~-~~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-.. ..+ ... ...+-...+.+.++...+.++........|.-|+|..-.++++..+- .|+.|+.+|.+.
T Consensus 90 V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~ 169 (295)
T PRK14174 90 VHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN 169 (295)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 11100 000 000 00011112223333333334433221114667888877777766543 489999999985
Q ss_pred c---CHH-Hhh------hCCceEeeCCCCC--HHHHhhcCEEecC
Q psy3624 707 N---DSP-ALK------KADIGIAMGITGS--DVSKQTADMILLD 739 (1010)
Q Consensus 707 N---D~~-~l~------~A~vgIamg~~~~--~~ak~aAd~vl~~ 739 (1010)
. -.. ||. .|.|-++-. +.. +..-..||+++..
T Consensus 170 iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 170 IVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAA 213 (295)
T ss_pred cchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 5 233 333 355666554 322 2234578998854
No 216
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=42.21 E-value=8.4 Score=40.17 Aligned_cols=131 Identities=14% Similarity=0.119 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccCcccccccccchhhhcc
Q psy3624 820 RRHPRNPVTDKLVTGKLLFVAYGQIGVIEACAGFFSYFVIMAQNGWMPDKLIGIRARWESCAINDLEDSYGQEWTYASRK 899 (1010)
Q Consensus 820 ~~~p~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1010)
+||||-|. ......+|.+..++.+++|+++. |.++.
T Consensus 13 ~r~pr~p~----------~~a~l~~~~llll~ail~w~~ii---------------------msd~t------------- 48 (381)
T PF05297_consen 13 RRPPRCPQ----------PHASLLFGLLLLLVAILVWFFII---------------------MSDLT------------- 48 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCC----------cchhHHHHHHHHHHHHHHHHHHH---------------------Hhccc-------------
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhhccCccccccCccChhHHHHHHHHHHHHHHHhccccccccccccccCchhHHHHH
Q psy3624 900 ILEYTCHTAFFIAIVVVQWADLLICKTRYNSLVHQGMNNWVLNFGIVFETVAACIVSYCPGMDEILKTYPVRAEWWLPAV 979 (1010)
Q Consensus 900 ~~~~~~~t~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~ip~l~~~f~~~~l~~~~wl~~l 979 (1010)
+..+.+..+|.++.+..+++.. +|++. +++-+.+.+++.+.+++. +......+.-....-++.+
T Consensus 49 ----~~a~~vl~sfAvvliiIIiIIm-----lF~Rr-----LLCPLGlLCiilimi~lL--v~~L~tLtGQ~LF~Gi~~l 112 (381)
T PF05297_consen 49 ----QGALTVLYSFAVVLIIIIIIIM-----LFKRR-----LLCPLGLLCIILIMIVLL--VSMLWTLTGQTLFVGIVIL 112 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----cchHHHHHHHHHHHHHHHHHHH-----HHHHh-----hcCcchHHHHHHHHHHHH--HHHHHHhhccHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCcccccccC
Q psy3624 980 PFAIVIFIYDECRRFWLRTHPNGWVERETYY 1010 (1010)
Q Consensus 980 ~~~~~~l~~~e~~K~~~r~~~~~~~~~~~~~ 1010 (1010)
++.+++.+.....-++.|+|--+|-+-...+
T Consensus 113 ~l~~lLaL~vW~Ym~lLr~~GAs~WtiLaFc 143 (381)
T PF05297_consen 113 FLCCLLALGVWFYMWLLRELGASFWTILAFC 143 (381)
T ss_dssp -------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
No 217
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=42.03 E-value=15 Score=29.86 Aligned_cols=23 Identities=35% Similarity=0.492 Sum_probs=13.4
Q ss_pred EEeCCeEEEEeCCCccCCcEEEe
Q psy3624 160 VIRDGQKKTILSSELVRGDVVDV 182 (1010)
Q Consensus 160 V~R~g~~~~i~~~~Lv~GDiV~l 182 (1010)
|..||+.+.-..+.|.|||+|.+
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HEETTB----SS----SSEEEEE
T ss_pred eEECCEEccccCCcCCCCCEEEE
Confidence 56789999999999999999998
No 218
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=42.02 E-value=26 Score=37.07 Aligned_cols=28 Identities=7% Similarity=-0.054 Sum_probs=22.0
Q ss_pred CcchHHHHHHHHHCCCeEEEEcCCCHHHH
Q psy3624 583 RPAVPDAVAKCRSAGIRVIMVTGDHPVTA 611 (1010)
Q Consensus 583 ~~~~~~aI~~l~~aGi~v~~~TGd~~~ta 611 (1010)
-++..++++.+++.|++. ++|......+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~ 167 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGIN 167 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEecc
Confidence 478889999999999997 7787665444
No 219
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=40.77 E-value=1.5e+02 Score=30.80 Aligned_cols=66 Identities=23% Similarity=0.319 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhhhHHHHHHHHHHhheeeccCcchHHHHHHHHHHHH
Q psy3624 273 IAKEIHHFMHLISAWAIFLGVTFFF--LSFALGYAWIDAVIFLIGIIVANVPEGLLATVTVCLSLTAK 338 (1010)
Q Consensus 273 l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~ 338 (1010)
+.+....+....+.+++++.++.++ ........+...+...+..+..++|..++++...+.....+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~ 217 (230)
T PF00122_consen 150 LNKIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAK 217 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHH
Confidence 3344444544444444444444344 23333345566777888888899999999998888776554
No 220
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.61 E-value=82 Score=34.00 Aligned_cols=158 Identities=11% Similarity=0.164 Sum_probs=82.8
Q ss_pred cCCCCcchHHHHHHHHHCCCe---EEEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHHHH----hhcCC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIR---VIMVTGDHPVTA------KAIAKAVGIISEGS--------ETLEDIA----KRRRV 637 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~---v~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~~~----~~~~~ 637 (1010)
..+++++.++.++.+++.|++ .++.-||++.+. ...|+++|+..... +.+.... ++..+
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 89 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 356788889999999988875 466778876654 44677888864211 1111111 11111
Q ss_pred ccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCcc
Q psy3624 638 PVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGVN 707 (1010)
Q Consensus 638 ~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~N 707 (1010)
+-... .+ ... ...+--..+.+.++...+.++....+ .|.-|+|..-.++++...- .|+.|+.+|.+..
T Consensus 90 ~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~--~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~i 167 (282)
T PRK14169 90 DAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEP--TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNI 167 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 11000 00 000 00011112222233333333333323 4667888877777777643 5889999999854
Q ss_pred ----CHHHhhhCCceEeeCCCCC-H--HHHhhcCEEec
Q psy3624 708 ----DSPALKKADIGIAMGITGS-D--VSKQTADMILL 738 (1010)
Q Consensus 708 ----D~~~l~~A~vgIamg~~~~-~--~ak~aAd~vl~ 738 (1010)
=+.||...|..|.+.-+-+ + ..-..||+++.
T Consensus 168 VGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 168 VGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVV 205 (282)
T ss_pred chHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 2445655555554431222 2 23356898885
No 221
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=39.59 E-value=24 Score=23.17 Aligned_cols=15 Identities=27% Similarity=0.415 Sum_probs=13.0
Q ss_pred cCCCCHHHHHHHhhc
Q psy3624 49 EKGLTSAQAKQFLLR 63 (1010)
Q Consensus 49 ~~GLs~~e~~~r~~~ 63 (1010)
+.|||.+|+.+|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999864
No 222
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=39.59 E-value=58 Score=29.44 Aligned_cols=14 Identities=43% Similarity=0.508 Sum_probs=7.3
Q ss_pred CCccCCcEEEecCC
Q psy3624 172 SELVRGDVVDVKFG 185 (1010)
Q Consensus 172 ~~Lv~GDiV~l~~G 185 (1010)
++|+|||-|....|
T Consensus 51 ~~Lk~Gd~VvT~gG 64 (106)
T PRK05585 51 SSLAKGDEVVTNGG 64 (106)
T ss_pred HhcCCCCEEEECCC
Confidence 34555555555444
No 223
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=39.53 E-value=52 Score=35.68 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=28.5
Q ss_pred ecChhhHHHHHHHHHHcCCeEEEEcCC-ccCHHHhhhCCce-Eee
Q psy3624 679 RTSPTQKLHIVEGCQRLGAIVAVTGDG-VNDSPALKKADIG-IAM 721 (1010)
Q Consensus 679 r~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~vg-Iam 721 (1010)
.-+|+--..+++.+.-..+.++||||. ..|+.+=++|++- |.+
T Consensus 202 KP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V 246 (279)
T TIGR01452 202 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLV 246 (279)
T ss_pred CCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEE
Confidence 334443344444444345689999999 5999999999973 444
No 224
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=38.56 E-value=3.4e+02 Score=29.11 Aligned_cols=118 Identities=13% Similarity=0.258 Sum_probs=63.5
Q ss_pred EEeecCC-CCcchHHHHHHHHHCCCeEEEEcCCCHHHHHH---HHHHcCCCCCCcccHHHHHhhcCCccccCCCCCccee
Q psy3624 575 LMSMIDP-PRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKA---IAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTI 650 (1010)
Q Consensus 575 ~i~~~d~-l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~---ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (1010)
+.+--++ .+-+..+.++.++++|+.-+++-.-+.+.+.. .+++.|+..- .
T Consensus 96 lm~Y~N~i~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I--------------------------~ 149 (263)
T CHL00200 96 IFTYYNPVLHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELI--------------------------L 149 (263)
T ss_pred EEecccHHHHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEE--------------------------E
Confidence 3344455 34477788888888888888877766666554 3455565320 0
Q ss_pred EEechhhhcCCHHHHHHHHhccCcEEEEec----------ChhhHHHHHHHHHHcCCeEEEEcCCccC---HHHhhhCCc
Q psy3624 651 VIQGSILRDMTTEQLENVLRTHREIVFART----------SPTQKLHIVEGCQRLGAIVAVTGDGVND---SPALKKADI 717 (1010)
Q Consensus 651 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~----------~p~~K~~iv~~l~~~g~~v~~iGDg~ND---~~~l~~A~v 717 (1010)
.+.- ....+.+..+....+..+|+-. .+++-.++++.+++.-..-+++|=|.|+ +..+..++.
T Consensus 150 lv~P----tT~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GA 225 (263)
T CHL00200 150 LIAP----TSSKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNI 225 (263)
T ss_pred EECC----CCCHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCC
Confidence 0000 0012233333333333344321 1345567777777765555667999885 444444433
Q ss_pred -eEeeC
Q psy3624 718 -GIAMG 722 (1010)
Q Consensus 718 -gIamg 722 (1010)
|+.+|
T Consensus 226 DGvVVG 231 (263)
T CHL00200 226 NGIVIG 231 (263)
T ss_pred CEEEEC
Confidence 66666
No 225
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=38.01 E-value=63 Score=26.58 Aligned_cols=33 Identities=24% Similarity=0.183 Sum_probs=24.6
Q ss_pred CCceEEEeCCeEEEEeCC---CccCCcEEEecCCCe
Q psy3624 155 PQYANVIRDGQKKTILSS---ELVRGDVVDVKFGDR 187 (1010)
Q Consensus 155 ~~~~~V~R~g~~~~i~~~---~Lv~GDiV~l~~G~~ 187 (1010)
...++|-.+|..++|+.. ++.|||.|.+..|.-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 346788889999998754 678999999999943
No 226
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.97 E-value=64 Score=34.88 Aligned_cols=159 Identities=14% Similarity=0.182 Sum_probs=81.9
Q ss_pred cCCCCcchHHHHHHHHHCCCe---EEEEcCCCHHHH------HHHHHHcCCCCCC--------cccHHHHHh----hcCC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIR---VIMVTGDHPVTA------KAIAKAVGIISEG--------SETLEDIAK----RRRV 637 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~---v~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~~~~~----~~~~ 637 (1010)
.+.++++.++.++++++.|++ .++.-||++... ...|+++|+..+. .+.+.+..+ +..+
T Consensus 12 a~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V 91 (285)
T PRK14189 12 SKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKI 91 (285)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCC
Confidence 456788889999999888875 355668776544 4466778886421 111222111 1111
Q ss_pred cccc-CCC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCcc
Q psy3624 638 PVSS-LDP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGVN 707 (1010)
Q Consensus 638 ~~~~-~~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~N 707 (1010)
+-.. ..+ ... ...+--..+.+.++...+.++....+ .|.-|+|..-.++++..+- .|..|+.+|-|..
T Consensus 92 ~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~i 169 (285)
T PRK14189 92 HGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQP--LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNI 169 (285)
T ss_pred CeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCC--CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCc
Confidence 1000 000 000 00011112222233333333333222 4667788777777766542 5889999999865
Q ss_pred ----CHHHhhhCCceEeeCCCCC-H--HHHhhcCEEecC
Q psy3624 708 ----DSPALKKADIGIAMGITGS-D--VSKQTADMILLD 739 (1010)
Q Consensus 708 ----D~~~l~~A~vgIamg~~~~-~--~ak~aAd~vl~~ 739 (1010)
=+.+|...+.-|.+--..+ + ..-..||+++.-
T Consensus 170 VGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 170 VGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred cHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 2445566555554431222 2 234578988853
No 227
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=37.67 E-value=17 Score=31.08 Aligned_cols=22 Identities=41% Similarity=0.548 Sum_probs=16.3
Q ss_pred EeCCCccCCcEEEe-cCCCeecc
Q psy3624 169 ILSSELVRGDVVDV-KFGDRIPA 190 (1010)
Q Consensus 169 i~~~~Lv~GDiV~l-~~G~~iPa 190 (1010)
+.-.+|.+||.|.+ ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 34578999999998 57999995
No 228
>PLN03190 aminophospholipid translocase; Provisional
Probab=36.66 E-value=83 Score=41.54 Aligned_cols=30 Identities=7% Similarity=0.233 Sum_probs=24.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhCC
Q psy3624 971 RAEWWLPAVPFAIVIFIYDECRRFWLRTHP 1000 (1010)
Q Consensus 971 ~~~~wl~~l~~~~~~l~~~e~~K~~~r~~~ 1000 (1010)
.+.+|+.+++..++.++.+-++|++.|.+.
T Consensus 1114 ~~~fwl~ill~~~~~l~p~~~~~~~~~~~~ 1143 (1178)
T PLN03190 1114 TGSFWLCLLAIVVAALLPRFVVKVLYQYFT 1143 (1178)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 467898888888888889999999887554
No 229
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.48 E-value=1e+02 Score=33.22 Aligned_cols=160 Identities=14% Similarity=0.150 Sum_probs=81.4
Q ss_pred cCCCCcchHHHHHHHHHCCCe---EEEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHHHHh----hcCC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIR---VIMVTGDHPVTA------KAIAKAVGIISEGS--------ETLEDIAK----RRRV 637 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~---v~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~~~~----~~~~ 637 (1010)
.++++++.++.++.+++.|++ .++.-||++.+. ...|+++|+..+.. +.+.+..+ +..+
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V 89 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 456788899999999988876 466778877654 45677889865211 11222111 1111
Q ss_pred ccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHH--HcCCeEEEEcCCcc
Q psy3624 638 PVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQ--RLGAIVAVTGDGVN 707 (1010)
Q Consensus 638 ~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~--~~g~~v~~iGDg~N 707 (1010)
+-... .+ ... ...+--..+.+.++...+.++....+. -|.-|+|..-.++++..+ -.|..|+.+|.+..
T Consensus 90 ~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~-~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~i 168 (282)
T PRK14182 90 HGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIGIAG-VPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNI 168 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCCCCC-CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 10000 00 000 000111122222333333344332221 155677777777777654 25889999999854
Q ss_pred ----CHHHhhhCCceEeeCCCCCH---HHHhhcCEEecC
Q psy3624 708 ----DSPALKKADIGIAMGITGSD---VSKQTADMILLD 739 (1010)
Q Consensus 708 ----D~~~l~~A~vgIamg~~~~~---~ak~aAd~vl~~ 739 (1010)
=+.||...|.-|.+--+.+. ..-..||+++.-
T Consensus 169 VGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 169 VGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAA 207 (282)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 24456544444433312222 223468988853
No 230
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.00 E-value=85 Score=33.95 Aligned_cols=158 Identities=16% Similarity=0.225 Sum_probs=82.4
Q ss_pred cCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCC--------cccHHH----HHhhcC
Q psy3624 579 IDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEG--------SETLED----IAKRRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~~----~~~~~~ 636 (1010)
.+.++++.++.++++++. |++ .++..||++.+. ...|+++|+.... .+.+.+ +.++..
T Consensus 11 a~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (284)
T PRK14179 11 AQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPT 90 (284)
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 356778888999999876 664 456778776544 4567788886421 111222 222221
Q ss_pred CccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcC-C
Q psy3624 637 VPVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGD-G 705 (1010)
Q Consensus 637 ~~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGD-g 705 (1010)
++-... .+ ... ...+--..+.+.++...+.++....+ .|.-|+|..-.++++...- .|..++++|- |
T Consensus 91 V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~--~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ 168 (284)
T PRK14179 91 WHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRP--VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSN 168 (284)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCC--CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 111000 00 000 00011112223333333444443333 4677888877777776543 4889999999 4
Q ss_pred ccC---HHHhhhCCceEeeCCCCCH---HHHhhcCEEec
Q psy3624 706 VND---SPALKKADIGIAMGITGSD---VSKQTADMILL 738 (1010)
Q Consensus 706 ~ND---~~~l~~A~vgIamg~~~~~---~ak~aAd~vl~ 738 (1010)
.-= +.+|.+++.-+.+-.+.++ ..-..||+|+.
T Consensus 169 ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 169 IVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred cCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 433 4456667766655312222 23456899885
No 231
>KOG0206|consensus
Probab=35.97 E-value=80 Score=40.86 Aligned_cols=30 Identities=17% Similarity=0.250 Sum_probs=25.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhCC
Q psy3624 971 RAEWWLPAVPFAIVIFIYDECRRFWLRTHP 1000 (1010)
Q Consensus 971 ~~~~wl~~l~~~~~~l~~~e~~K~~~r~~~ 1000 (1010)
.+.+|+.+++..++.++.+-++|.+.+.+.
T Consensus 1049 ~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~ 1078 (1151)
T KOG0206|consen 1049 SPSFWLTLLLTVVAALLPDFVYKSLQRTFF 1078 (1151)
T ss_pred CchHHHHHHHHHHHHHhHHHHHHHHHHhhC
Confidence 467999999999999999999998886544
No 232
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.67 E-value=92 Score=33.70 Aligned_cols=158 Identities=18% Similarity=0.257 Sum_probs=82.6
Q ss_pred ecCCCCcchHHHHHHHHHCCCeE---EEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHHH----HhhcC
Q psy3624 578 MIDPPRPAVPDAVAKCRSAGIRV---IMVTGDHPVTA------KAIAKAVGIISEGS--------ETLEDI----AKRRR 636 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~aGi~v---~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~~----~~~~~ 636 (1010)
+.+.++++.++.++++++.|++. ++.-||++... ...|+++|+..... +.+.+. .++.+
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 90 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPR 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567888899999999888753 45568776543 55677888864211 112221 12221
Q ss_pred Ccccc-CCC--CC-----cceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSS-LDP--RE-----STTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~-~~~--~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-.. ..+ .. ....+--..+.+.++...+.++....+ .|.-|+|..-.++++..+- .|..|+.+|-+.
T Consensus 91 V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~ 168 (284)
T PRK14190 91 INGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQD--TFLPCTPHGILELLKEYNIDISGKHVVVVGRSN 168 (284)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCC--CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC
Confidence 11100 000 00 000011112223333333444443333 4677888887777777653 588999999985
Q ss_pred c----CHHHhhhCC--ceEeeCCCCCH--HHHhhcCEEec
Q psy3624 707 N----DSPALKKAD--IGIAMGITGSD--VSKQTADMILL 738 (1010)
Q Consensus 707 N----D~~~l~~A~--vgIamg~~~~~--~ak~aAd~vl~ 738 (1010)
. =+.||...+ |-++-. ...+ ..-..||+++.
T Consensus 169 iVG~Pla~lL~~~~atVt~chs-~t~~l~~~~~~ADIvI~ 207 (284)
T PRK14190 169 IVGKPVGQLLLNENATVTYCHS-KTKNLAELTKQADILIV 207 (284)
T ss_pred ccHHHHHHHHHHCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 4 244554444 444432 2222 23456898885
No 233
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=35.55 E-value=34 Score=31.49 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=31.5
Q ss_pred CCCcchHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIR-VIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~-v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
-+.+.+.+.++++.+.|++ +|+.+|.....+...|++.|+.
T Consensus 63 ~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 63 VPPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp S-HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 4677899999999999996 9999999999999999999883
No 234
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.21 E-value=85 Score=33.89 Aligned_cols=159 Identities=14% Similarity=0.174 Sum_probs=83.3
Q ss_pred cCCCCcchHHHHHHHHHCCCeE---EEEcCCCHHHH------HHHHHHcCCCCCC--------cccHHHHHh----hcCC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRV---IMVTGDHPVTA------KAIAKAVGIISEG--------SETLEDIAK----RRRV 637 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v---~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~~~~~----~~~~ 637 (1010)
.+.++++.++.++++++.|++. ++.-||++.+. ...|+++|+.... .+.+.+..+ +..+
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V 89 (282)
T PRK14166 10 SAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 3567788899999999888764 66778776544 4567788986421 111222211 1111
Q ss_pred ccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhc-cCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 638 PVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRT-HREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 638 ~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
+-... .+ ... ...+--..+.+.++...+.++... .+ -|.-|+|..-.++++..+- .|..|+.+|-|.
T Consensus 90 ~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~--~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~ 167 (282)
T PRK14166 90 HGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLES--GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASN 167 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCC--CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 11000 00 000 000111122222333333333322 12 4667888877777777643 588999999986
Q ss_pred c----CHHHhhhCCceEeeCCCCCH---HHHhhcCEEecC
Q psy3624 707 N----DSPALKKADIGIAMGITGSD---VSKQTADMILLD 739 (1010)
Q Consensus 707 N----D~~~l~~A~vgIamg~~~~~---~ak~aAd~vl~~ 739 (1010)
. =+.||...|..|.+--+-+. ..-..||+++..
T Consensus 168 iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 168 IVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred cchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 5 24456656655554312222 233568988853
No 235
>KOG2882|consensus
Probab=34.82 E-value=60 Score=34.91 Aligned_cols=48 Identities=25% Similarity=0.461 Sum_probs=42.3
Q ss_pred EEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH---HcCCC
Q psy3624 574 GLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAK---AVGII 621 (1010)
Q Consensus 574 G~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~---~~gi~ 621 (1010)
|++...+.+-|++.++++.|++.|-+++++|-.+..+-+.+++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 8888899999999999999999999999999999888888776 45664
No 236
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=34.15 E-value=60 Score=31.70 Aligned_cols=44 Identities=18% Similarity=0.155 Sum_probs=38.9
Q ss_pred ecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q psy3624 578 MIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIIS 622 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~ 622 (1010)
..-.+||++.+.+++|++. +++.++|.-....|..+.+.++...
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 3446899999999999955 9999999999999999999998753
No 237
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=33.97 E-value=3.7e+02 Score=31.89 Aligned_cols=148 Identities=18% Similarity=0.138 Sum_probs=82.7
Q ss_pred eCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCceEEEeecccCCCccccccCCCcccccccccceeeeeeeeeee
Q psy3624 162 RDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHGFKVDNSSLTGEAEPQARNASESTTIVLEAKNLAFFSTNAVEG 241 (1010)
Q Consensus 162 R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~l~Vdes~LTGEs~pv~K~~~~~~~~~~~~~n~~~~Gt~v~~g 241 (1010)
+-|....+...|.+|-|.+.++. ..=+|--.|.|++.-+.-. .|+... ++. ..+.|+....-
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~--~g~~v~----~gs----------~~~~G~~~~~v 114 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT--AGDAVF----AGT----------YVFNGTLIVVV 114 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec--cCCccc----cCc----------EEeccEEEEEE
Confidence 46889999999999999999865 3445555566665323322 133221 121 24455543321
Q ss_pred e---------EeEEEEEcCCcCchhhhhhcccCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHH
Q psy3624 242 T---------AKGIVILCGDNTVMGRIAGLTSGLESGDTPIAKEI-HHFMHLISAWAIFLGVTFFFLSFA---LGYAWID 308 (1010)
Q Consensus 242 ~---------~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 308 (1010)
. ..+.++++|.+|+. .+ .....+.. ..+...++.+++++.+.+...... +...+..
T Consensus 115 ~~~~~~s~~~~i~~~v~~~~~~k~-~~----------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~ 183 (499)
T TIGR01494 115 SATGPNTFGGKIAVVVYTGFETKT-PL----------QPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLR 183 (499)
T ss_pred EEeccccHHHHHHHHHHhcCCCCC-ch----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 1 23445567766521 11 11122222 345544444444444333322211 3345677
Q ss_pred HHHHHHHhheeeccCcchHHHHHHHHHHHH
Q psy3624 309 AVIFLIGIIVANVPEGLLATVTVCLSLTAK 338 (1010)
Q Consensus 309 ~~~~~i~~l~~~iP~~L~~~~~~~~~~~~~ 338 (1010)
.+...+.....++|.++|++...+.....+
T Consensus 184 ~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~ 213 (499)
T TIGR01494 184 ALILLVIAIPIALPLAVTIALAVGDARLAK 213 (499)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 788888888999999999998888766554
No 238
>KOG3085|consensus
Probab=33.34 E-value=1.7e+02 Score=30.80 Aligned_cols=108 Identities=12% Similarity=0.090 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCCcccHHHHHhhcCCccccCCCCCcceeEEechhhhcC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGIISEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSILRDM 660 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 660 (1010)
++-++..+++++||++|..+.++|-=.... +.+-..+|+..
T Consensus 113 ~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~-------------------------------------- 153 (237)
T KOG3085|consen 113 KYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSA-------------------------------------- 153 (237)
T ss_pred eeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHH--------------------------------------
Confidence 455666799999999998888887654332 25555666532
Q ss_pred CHHHHHHHHhccCcEEEEecChhhHHHHHHHHHHcCCeEEEEcCC-ccCHHHhhhCCc-eEeeCCCCCHHHHhh
Q psy3624 661 TTEQLENVLRTHREIVFARTSPTQKLHIVEGCQRLGAIVAVTGDG-VNDSPALKKADI-GIAMGITGSDVSKQT 732 (1010)
Q Consensus 661 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~v-gIamg~~~~~~ak~a 732 (1010)
.++.++..+.. =.-.-.|.-=...++.+.-+-+.++++||. .||...-+.+|. ++=+. ++....++.
T Consensus 154 ---~fD~vv~S~e~-g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~-~~~~~~~~~ 222 (237)
T KOG3085|consen 154 ---YFDFVVESCEV-GLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD-NSITALKEL 222 (237)
T ss_pred ---hhhhhhhhhhh-ccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc-cccchhhhh
Confidence 11112111110 000112222233344444455679999996 899999888886 55555 555554443
No 239
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.32 E-value=1.1e+02 Score=33.16 Aligned_cols=159 Identities=13% Similarity=0.169 Sum_probs=80.9
Q ss_pred cCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCC--------cccHHHHHh----hcC
Q psy3624 579 IDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEG--------SETLEDIAK----RRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~~~~~----~~~ 636 (1010)
.++++++.++.++.+++. |++ .++.-||++... ...|+++|+..+. .+.+.+..+ +..
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (285)
T PRK14191 10 SYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQN 89 (285)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 456778888999999865 665 456678876554 4467788886421 111222111 111
Q ss_pred Ccccc-CCC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSS-LDP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~-~~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-.. ..+ ... ...+--..+.+.++...+.++....+ -|.-|+|..-.++++..+- .|..|+.+|.|.
T Consensus 90 V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~--~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~ 167 (285)
T PRK14191 90 IDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQLD--GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASN 167 (285)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCC--CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCc
Confidence 11000 000 000 00011112222333333344443333 4667888887777777643 489999999993
Q ss_pred c----CHHHhhhCCceEeeCC-CCCHH--HHhhcCEEecC
Q psy3624 707 N----DSPALKKADIGIAMGI-TGSDV--SKQTADMILLD 739 (1010)
Q Consensus 707 N----D~~~l~~A~vgIamg~-~~~~~--ak~aAd~vl~~ 739 (1010)
. =+.+|...+.-|.+-- ...+. .-..||+++.-
T Consensus 168 ~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 168 IVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred hhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 3 2445544444443321 22222 34568888753
No 240
>PF15584 Imm44: Immunity protein 44
Probab=32.96 E-value=19 Score=30.99 Aligned_cols=19 Identities=26% Similarity=0.216 Sum_probs=15.1
Q ss_pred CCcEEEecCCCeecccEEE
Q psy3624 176 RGDVVDVKFGDRIPADIRI 194 (1010)
Q Consensus 176 ~GDiV~l~~G~~iPaD~~l 194 (1010)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3455678899999999965
No 241
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=31.47 E-value=2.5e+02 Score=30.31 Aligned_cols=52 Identities=17% Similarity=0.210 Sum_probs=36.1
Q ss_pred EEEecChhhHHHHHHHHHHcCCeEEEEcCC-ccCHHHhhhCC-ceEeeCCCCCH
Q psy3624 676 VFARTSPTQKLHIVEGCQRLGAIVAVTGDG-VNDSPALKKAD-IGIAMGITGSD 727 (1010)
Q Consensus 676 v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A~-vgIamg~~~~~ 727 (1010)
|...-+..+-.++.+..++.|..+..+.+. .-|...|+.++ |||.-|.+..+
T Consensus 214 VVGg~nSsNT~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAGASTP~ 267 (280)
T TIGR00216 214 VIGGKNSSNTTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAGASTPD 267 (280)
T ss_pred EECCCCCchHHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEecCCCCH
Confidence 344455567888888888888888888775 34677887654 68888844333
No 242
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=31.28 E-value=62 Score=37.39 Aligned_cols=26 Identities=8% Similarity=0.029 Sum_probs=17.3
Q ss_pred CccChhHHHHHHHHHHHHHHHhcccc
Q psy3624 935 GMNNWVLNFGIVFETVAACIVSYCPG 960 (1010)
Q Consensus 935 ~~~n~~~~~~i~~~~~~~~~~~~ip~ 960 (1010)
.+.|.+|.+=+++.+++.+...++|.
T Consensus 106 ~ihng~W~~K~l~l~~l~v~~FfiP~ 131 (429)
T PF03348_consen 106 AIHNGFWFLKFLLLIGLIVGAFFIPN 131 (429)
T ss_pred HHHHhhHHHHHHHHHHHHheeEEeCc
Confidence 35777777766666666666666774
No 243
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.15 E-value=1e+02 Score=33.59 Aligned_cols=159 Identities=16% Similarity=0.218 Sum_probs=81.7
Q ss_pred ecCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCC------Cc--ccHHHHHh----hc
Q psy3624 578 MIDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISE------GS--ETLEDIAK----RR 635 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~------~~--~~~~~~~~----~~ 635 (1010)
+.++++++.++.++.+++. |++ .++.-||++... ...|+++|+..+ +. +.+.+..+ +.
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 89 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDE 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456788888999998876 765 466778876654 446778888652 11 11222211 11
Q ss_pred CCccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCC
Q psy3624 636 RVPVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDG 705 (1010)
Q Consensus 636 ~~~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg 705 (1010)
.++-... .+ ... ...+-...+.+.++...+.++..... -|.-|+|..-.++++...- .|..|+.+|-+
T Consensus 90 ~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS 167 (297)
T PRK14186 90 RVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKGEP--GLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRS 167 (297)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 1111000 00 000 00111112223333333334433222 3666888877777777643 58999999998
Q ss_pred cc----CHHHhhhCCceEeeCCCCC-H--HHHhhcCEEec
Q psy3624 706 VN----DSPALKKADIGIAMGITGS-D--VSKQTADMILL 738 (1010)
Q Consensus 706 ~N----D~~~l~~A~vgIamg~~~~-~--~ak~aAd~vl~ 738 (1010)
.. =+.||...+..|.+--+.+ + ..-..||+++.
T Consensus 168 ~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIs 207 (297)
T PRK14186 168 ILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVA 207 (297)
T ss_pred ccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 54 2445554444443331222 2 23356898885
No 244
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=30.82 E-value=57 Score=27.92 Aligned_cols=14 Identities=36% Similarity=0.285 Sum_probs=0.6
Q ss_pred CCccCCcEEEecCC
Q psy3624 172 SELVRGDVVDVKFG 185 (1010)
Q Consensus 172 ~~Lv~GDiV~l~~G 185 (1010)
++|+|||-|....|
T Consensus 35 ~~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 35 ASLKPGDEVVTIGG 48 (82)
T ss_dssp G-------------
T ss_pred HcCCCCCEEEECCc
Confidence 56777777776665
No 245
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.72 E-value=23 Score=35.58 Aligned_cols=13 Identities=38% Similarity=0.455 Sum_probs=12.1
Q ss_pred EEecCCcccccCc
Q psy3624 362 ICSDKTGTLTQNR 374 (1010)
Q Consensus 362 i~~DKTGTLT~n~ 374 (1010)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999987
No 246
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=30.30 E-value=55 Score=29.01 Aligned_cols=30 Identities=30% Similarity=0.571 Sum_probs=24.2
Q ss_pred eEEEeCCeEEEEeCCCccCCcEEEecCCCee
Q psy3624 158 ANVIRDGQKKTILSSELVRGDVVDVKFGDRI 188 (1010)
Q Consensus 158 ~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~i 188 (1010)
=+|.=||+.. -+++++++||+|.|.-|...
T Consensus 34 GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 34 GRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 3566677766 79999999999999988764
No 247
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=30.00 E-value=2.4e+02 Score=23.76 Aligned_cols=18 Identities=11% Similarity=0.202 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy3624 274 AKEIHHFMHLISAWAIFL 291 (1010)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~ 291 (1010)
|+..+++...+..+..++
T Consensus 6 Q~~ae~l~~~il~~~~ii 23 (76)
T PF06645_consen 6 QRLAEKLMQYILIISAII 23 (76)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 566666666655444433
No 248
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.81 E-value=1.4e+02 Score=32.60 Aligned_cols=157 Identities=18% Similarity=0.237 Sum_probs=82.0
Q ss_pred cCCCCcchHHHHHHHHHCCCe---EEEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHH----HHhhcCC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIR---VIMVTGDHPVTA------KAIAKAVGIISEGS--------ETLED----IAKRRRV 637 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~---v~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~----~~~~~~~ 637 (1010)
.+.++++.++.++++++.|++ .++.-||++.+. ...|+++|+..+.. +.+.+ ..++..+
T Consensus 11 A~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (297)
T PRK14167 11 AAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDV 90 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 456788889999999988885 466778876654 44677888864210 11111 1122111
Q ss_pred ccccC-CC--CC-----cceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCcc
Q psy3624 638 PVSSL-DP--RE-----STTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGVN 707 (1010)
Q Consensus 638 ~~~~~-~~--~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~N 707 (1010)
+-... .+ .. ....+--..+.+.++...+.++....+ -|.-|+|..-.++++..+- .|..|+.+|-+..
T Consensus 91 ~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~--~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~i 168 (297)
T PRK14167 91 HGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDA--RFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDI 168 (297)
T ss_pred CEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 11000 00 00 000011112222233333333333222 4667888877777777653 5899999999854
Q ss_pred ---C-HHHhhh------CCceEeeCCCCCH--HHHhhcCEEec
Q psy3624 708 ---D-SPALKK------ADIGIAMGITGSD--VSKQTADMILL 738 (1010)
Q Consensus 708 ---D-~~~l~~------A~vgIamg~~~~~--~ak~aAd~vl~ 738 (1010)
- +-||.. |-|-++-. ...+ ..-..||+++.
T Consensus 169 VGkPla~lL~~~~~~~~aTVtvchs-~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 169 VGKPMANLLIQKADGGNATVTVCHS-RTDDLAAKTRRADIVVA 210 (297)
T ss_pred cHHHHHHHHhcCccCCCCEEEEeCC-CCCCHHHHHhhCCEEEE
Confidence 2 334543 33555433 2222 23457899885
No 249
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=29.34 E-value=4.1e+02 Score=34.46 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHc-C----CeEEEEcCCcc-C-HHHhhhCCceEeeC
Q psy3624 683 TQKLHIVEGCQRL-G----AIVAVTGDGVN-D-SPALKKADIGIAMG 722 (1010)
Q Consensus 683 ~~K~~iv~~l~~~-g----~~v~~iGDg~N-D-~~~l~~A~vgIamg 722 (1010)
..|.+.+++|..+ | ++++++||+.| | ..||.--+-+|-+.
T Consensus 955 ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~ 1001 (1050)
T TIGR02468 955 ASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILK 1001 (1050)
T ss_pred CCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEe
Confidence 4699999998764 2 35677999999 9 55777778888774
No 250
>PRK13670 hypothetical protein; Provisional
Probab=29.06 E-value=3e+02 Score=31.37 Aligned_cols=97 Identities=16% Similarity=0.205 Sum_probs=63.8
Q ss_pred EEEEEEeecCCCCcchHHHHHHHHH---CCCeEEEEcCC----------CHHHHHHHHHHcCCCCCCcccHHHHHhhcCC
Q psy3624 571 RFLGLMSMIDPPRPAVPDAVAKCRS---AGIRVIMVTGD----------HPVTAKAIAKAVGIISEGSETLEDIAKRRRV 637 (1010)
Q Consensus 571 ~~lG~i~~~d~l~~~~~~aI~~l~~---aGi~v~~~TGd----------~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~ 637 (1010)
..+|+|+=-|++-.|-...|+++++ +|..+++++|+ +...=..+|.++|++-
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~--------------- 66 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDL--------------- 66 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCE---------------
Confidence 4579999999999999999988875 47777777665 1222233444444421
Q ss_pred ccccCCCCCcceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHH-HHHHHHHcCCeEEEEcCCccCHHHhhh
Q psy3624 638 PVSSLDPRESTTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLH-IVEGCQRLGAIVAVTGDGVNDSPALKK 714 (1010)
Q Consensus 638 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~-iv~~l~~~g~~v~~iGDg~ND~~~l~~ 714 (1010)
++. .+- .|+..+|++=.+ .|+.|...|-..+++|....|...|+.
T Consensus 67 -------------vie------------------lpf-~~a~~sae~F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 67 -------------VVE------------------LPF-LYSVQSADFFAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred -------------EEE------------------eCC-chHhCCHHHHHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 111 011 377788886554 566776678788999988666666654
No 251
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=28.99 E-value=1.2e+02 Score=26.00 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=38.2
Q ss_pred EEeecCCCCcchHHHHHHHHHCCCeEEE-EcCCCHHHHHHHHHHcCCC
Q psy3624 575 LMSMIDPPRPAVPDAVAKCRSAGIRVIM-VTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 575 ~i~~~d~l~~~~~~aI~~l~~aGi~v~~-~TGd~~~ta~~ia~~~gi~ 621 (1010)
++.+.+...+.+.+..+.|++.|+++.+ ..+++...-...|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445566778888999999999999988 6778888888888888875
No 252
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=28.73 E-value=92 Score=28.64 Aligned_cols=40 Identities=15% Similarity=0.293 Sum_probs=30.7
Q ss_pred cCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Q psy3624 579 IDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGI 620 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi 620 (1010)
..--.+++.++++.+++.|++++.+|++.. ....+.+.|.
T Consensus 52 ~SG~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 52 YSGNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 344667899999999999999999998874 4445655554
No 253
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.61 E-value=1e+02 Score=33.39 Aligned_cols=159 Identities=17% Similarity=0.247 Sum_probs=81.3
Q ss_pred ecCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCC--------cccHH----HHHhhc
Q psy3624 578 MIDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEG--------SETLE----DIAKRR 635 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~----~~~~~~ 635 (1010)
+.++++++.++.++.+++. |++ .++.-||++... ...|+++|+..+. .+.+. ++.++.
T Consensus 16 iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~ 95 (287)
T PRK14176 16 LAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRK 95 (287)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4567888889999999877 664 456667765543 4467788885421 11111 122222
Q ss_pred CCccccCC-C--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCC
Q psy3624 636 RVPVSSLD-P--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDG 705 (1010)
Q Consensus 636 ~~~~~~~~-~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg 705 (1010)
+++-...+ + ... ...+--..+.+.++...+.++..... .|.-|+|..-.++++..+- .|..|+.+|-|
T Consensus 96 ~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~--~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs 173 (287)
T PRK14176 96 DVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIGDE--GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHS 173 (287)
T ss_pred CCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcCCC--CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCC
Confidence 21111000 0 000 00011112222233333333333222 4667888887777777643 58899999998
Q ss_pred cc----CHHHhhhCCceEeeCC-CCCH--HHHhhcCEEec
Q psy3624 706 VN----DSPALKKADIGIAMGI-TGSD--VSKQTADMILL 738 (1010)
Q Consensus 706 ~N----D~~~l~~A~vgIamg~-~~~~--~ak~aAd~vl~ 738 (1010)
.. =+.+|...|..|.+.- ...+ ..-..||+++.
T Consensus 174 ~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~ 213 (287)
T PRK14176 174 NVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVV 213 (287)
T ss_pred cccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEE
Confidence 63 2445555554444431 2222 22346788873
No 254
>KOG2592|consensus
Probab=28.32 E-value=1.5e+02 Score=33.20 Aligned_cols=25 Identities=12% Similarity=0.045 Sum_probs=19.0
Q ss_pred ccChhHHHHHHHHHHHHHHHhcccc
Q psy3624 936 MNNWVLNFGIVFETVAACIVSYCPG 960 (1010)
Q Consensus 936 ~~n~~~~~~i~~~~~~~~~~~~ip~ 960 (1010)
+.|.+|.+=+++-+.+.+...|+|.
T Consensus 109 iqng~W~fK~i~~~~l~i~~FfIP~ 133 (426)
T KOG2592|consen 109 IQNGFWFFKFILWFGLIVGSFFIPN 133 (426)
T ss_pred HHcCcHHHHHHHHHHHHHheEEcCC
Confidence 4777787777777777777778875
No 255
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.18 E-value=1.6e+02 Score=31.94 Aligned_cols=159 Identities=14% Similarity=0.167 Sum_probs=82.1
Q ss_pred ecCCCCcchHHHHHHHHHCC-C---eEEEEcCCCHHHH------HHHHHHcCCCCCC--------cccHHH----HHhhc
Q psy3624 578 MIDPPRPAVPDAVAKCRSAG-I---RVIMVTGDHPVTA------KAIAKAVGIISEG--------SETLED----IAKRR 635 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~aG-i---~v~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~~----~~~~~ 635 (1010)
+.++++++.++.++++++.| . -.++.-|+++.+. ...|+++|+..+. .+.+.+ ..++.
T Consensus 11 ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~ 90 (284)
T PRK14177 11 LSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDP 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 34578888999999998764 3 2566777775543 4567788886421 111221 11222
Q ss_pred CCccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCC
Q psy3624 636 RVPVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDG 705 (1010)
Q Consensus 636 ~~~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg 705 (1010)
+++-... .+ ... ...+--..+.+.++...+.++....+ .|.-|+|..-.++++..+- .|+.|+.+|-+
T Consensus 91 ~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~--~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS 168 (284)
T PRK14177 91 NVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMGVE--TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRS 168 (284)
T ss_pred CCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 2111000 00 000 00011112223333333444443333 4677888777777766543 48899999998
Q ss_pred cc----CHHHhhhCCceEeeCCCCCH---HHHhhcCEEec
Q psy3624 706 VN----DSPALKKADIGIAMGITGSD---VSKQTADMILL 738 (1010)
Q Consensus 706 ~N----D~~~l~~A~vgIamg~~~~~---~ak~aAd~vl~ 738 (1010)
.. =+.||.+.+..|.+--+.+. ..-..||+++.
T Consensus 169 ~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIs 208 (284)
T PRK14177 169 PILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVG 208 (284)
T ss_pred CcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 54 24456555555554312222 23456898885
No 256
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=28.07 E-value=5e+02 Score=27.98 Aligned_cols=53 Identities=21% Similarity=0.274 Sum_probs=35.2
Q ss_pred EEEecChhhHHHHHHHHHHcCCeEEEEcCCc-cCHHHhhh-CCceEeeCCCCCHH
Q psy3624 676 VFARTSPTQKLHIVEGCQRLGAIVAVTGDGV-NDSPALKK-ADIGIAMGITGSDV 728 (1010)
Q Consensus 676 v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~~l~~-A~vgIamg~~~~~~ 728 (1010)
|....+..+-.++.+.-++.|.....+.+.. =|-+-|+. ..|||.-|.+..|.
T Consensus 218 VVG~~nSSNs~rL~eiA~~~g~~aylId~~~ei~~~w~~~~~~VGvTAGAStPd~ 272 (294)
T COG0761 218 VVGSKNSSNSNRLAEIAKRHGKPAYLIDDAEEIDPEWLKGVKTVGVTAGASTPDW 272 (294)
T ss_pred EECCCCCccHHHHHHHHHHhCCCeEEeCChHhCCHHHhcCccEEEEecCCCCCHH
Confidence 3444555677788888888888777776642 24555665 56899888555554
No 257
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.71 E-value=1.4e+02 Score=32.32 Aligned_cols=78 Identities=17% Similarity=0.298 Sum_probs=44.4
Q ss_pred CCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCcc-CHH---HhhhCCceEeeCCCCCH---HHH
Q psy3624 660 MTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGVN-DSP---ALKKADIGIAMGITGSD---VSK 730 (1010)
Q Consensus 660 ~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~N-D~~---~l~~A~vgIamg~~~~~---~ak 730 (1010)
++...+.++....+ -|.-|+|..-.++++...- .|..|..+|-|.. =-| +|...+-.+...-+.+. ..-
T Consensus 116 l~~~n~g~l~~~~~--~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~ 193 (279)
T PRK14178 116 FHPLNLGRLVSGLP--GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAEL 193 (279)
T ss_pred CChhhHHHHhCCCC--CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHH
Confidence 33333444443333 4667888877777777643 5889999999843 333 56555444433312222 223
Q ss_pred hhcCEEecC
Q psy3624 731 QTADMILLD 739 (1010)
Q Consensus 731 ~aAd~vl~~ 739 (1010)
..||+++..
T Consensus 194 ~~ADIvI~A 202 (279)
T PRK14178 194 RQADILVSA 202 (279)
T ss_pred hhCCEEEEC
Confidence 468888754
No 258
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=27.62 E-value=8e+02 Score=31.75 Aligned_cols=78 Identities=13% Similarity=0.079 Sum_probs=47.1
Q ss_pred hhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCeEEEEeCCCccCCcEEEecCCCeecccEEEEEeCc-eEEEee
Q psy3624 127 TVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQKKTILSSELVRGDVVDVKFGDRIPADIRIIESHG-FKVDNS 205 (1010)
Q Consensus 127 ~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDiV~l~~G~~iPaD~~ll~~~~-l~Vdes 205 (1010)
+++++..+.....-+...++.+.++++..... ...+| ++-|....+...|.+|-|.++++.++ +-.|=-
T Consensus 41 ~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~------~~~~V----iRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ 110 (917)
T TIGR01116 41 VILLILVANAIVGVWQERNAEKAIEALKEYES------EHAKV----LRDGRWSVIKAKDLVPGDIVELAVGDKVPADIR 110 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC------CceEE----EECCEEEEEEHHHCCCCCEEEECCCCEeeccEE
Confidence 33344444455566677777777776643211 11222 23488889999999999999998665 334555
Q ss_pred cccCCCccc
Q psy3624 206 SLTGEAEPQ 214 (1010)
Q Consensus 206 ~LTGEs~pv 214 (1010)
.+.|++.-+
T Consensus 111 ll~~~~l~V 119 (917)
T TIGR01116 111 VLSLKTLRV 119 (917)
T ss_pred EEEecceEE
Confidence 566654333
No 259
>PLN02591 tryptophan synthase
Probab=27.17 E-value=7.1e+02 Score=26.46 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=28.5
Q ss_pred hhhHHHHHHHHHHcCCeEEEEcCCcc---CHHHhhhC-CceEeeC
Q psy3624 682 PTQKLHIVEGCQRLGAIVAVTGDGVN---DSPALKKA-DIGIAMG 722 (1010)
Q Consensus 682 p~~K~~iv~~l~~~g~~v~~iGDg~N---D~~~l~~A-~vgIamg 722 (1010)
|.+-.+.++.+++....-+++|=|.+ |+..+... -=|+-+|
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVG 218 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVG 218 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEEC
Confidence 55667778888876667777899988 56666555 3366666
No 260
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.84 E-value=1.8e+02 Score=31.41 Aligned_cols=158 Identities=15% Similarity=0.200 Sum_probs=81.6
Q ss_pred cCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCC------c--ccHHHH----HhhcC
Q psy3624 579 IDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEG------S--ETLEDI----AKRRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~------~--~~~~~~----~~~~~ 636 (1010)
.++++++.++.++++++. |++ +++.-||++... ...|+++|+..+. . +.+.+. .++..
T Consensus 10 a~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (282)
T PRK14180 10 SKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSS 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 456788889999999876 664 466778876654 4456788886421 1 112222 12221
Q ss_pred Ccccc-CCC--CCc-----ceeEEechhhhcCCHHHHHHHHhc-cCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCC
Q psy3624 637 VPVSS-LDP--RES-----TTIVIQGSILRDMTTEQLENVLRT-HREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDG 705 (1010)
Q Consensus 637 ~~~~~-~~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~-~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg 705 (1010)
++-.. ..+ ... ...+-...+.+.++...+.++... .+ -|.-|+|..-.++++..+- .|..|+.+|-+
T Consensus 90 V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~--~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS 167 (282)
T PRK14180 90 VHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKK--CLESCTPKGIMTMLREYGIKTEGAYAVVVGAS 167 (282)
T ss_pred CCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCCCC--CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 11100 000 000 001111122233333333333322 12 4667888887777777643 48899999998
Q ss_pred cc----CHHHhhhCCceEeeCC-CCCHH--HHhhcCEEec
Q psy3624 706 VN----DSPALKKADIGIAMGI-TGSDV--SKQTADMILL 738 (1010)
Q Consensus 706 ~N----D~~~l~~A~vgIamg~-~~~~~--ak~aAd~vl~ 738 (1010)
.. =+-||...+.-|.+-- ...+. .-..||+++.
T Consensus 168 ~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIs 207 (282)
T PRK14180 168 NVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIV 207 (282)
T ss_pred CcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEE
Confidence 54 2445555554444431 22222 2356888874
No 261
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=26.61 E-value=87 Score=26.98 Aligned_cols=14 Identities=36% Similarity=0.328 Sum_probs=8.0
Q ss_pred CCccCCcEEEecCC
Q psy3624 172 SELVRGDVVDVKFG 185 (1010)
Q Consensus 172 ~~Lv~GDiV~l~~G 185 (1010)
++|+|||-|....|
T Consensus 36 ~~L~~Gd~VvT~gG 49 (84)
T TIGR00739 36 ESLKKGDKVLTIGG 49 (84)
T ss_pred HhCCCCCEEEECCC
Confidence 45566666655555
No 262
>PF13748 ABC_membrane_3: ABC transporter transmembrane region
Probab=26.59 E-value=2.7e+02 Score=29.04 Aligned_cols=46 Identities=13% Similarity=0.306 Sum_probs=25.7
Q ss_pred hhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhhhccCCceEEEeCCe
Q psy3624 120 WLGIVLVTVCIITGIFSYSQEAKSARIMDSFKNMVPQYANVIRDGQ 165 (1010)
Q Consensus 120 ~~~~~l~~v~~i~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~ 165 (1010)
|.++..+.+.++...+-..-.++.++...++++..++++.+++.++
T Consensus 139 ~~g~~~l~~l~~~~~i~~~f~~~~~~L~~~LNnrlE~eV~~i~~~~ 184 (237)
T PF13748_consen 139 WLGLACLLILALFLLILPRFARRNYRLYRRLNNRLEKEVDIIERRK 184 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHhhcCC
Confidence 3444443333333333334445556666777777777777776654
No 263
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=26.27 E-value=1e+02 Score=34.41 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=35.4
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-C
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAV-G 619 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~-g 619 (1010)
..|++.+.+++|+++|+++.++|+-+...+..+.+.+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 4689999999999999999999999999999999986 6
No 264
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.10 E-value=1.4e+02 Score=32.40 Aligned_cols=159 Identities=19% Similarity=0.262 Sum_probs=80.5
Q ss_pred ecCCCCcchHHHHHHHHHCCCeE---EEEcCCCHHHH------HHHHHHcCCCCCC--------cccHHHH----HhhcC
Q psy3624 578 MIDPPRPAVPDAVAKCRSAGIRV---IMVTGDHPVTA------KAIAKAVGIISEG--------SETLEDI----AKRRR 636 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~aGi~v---~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~~~----~~~~~ 636 (1010)
+.++++++.++.++.+++.|++. ++.-||++... ...|+++|+.... .+.+.+. .++..
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~ 90 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPA 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567888889999998888764 44578776543 4567788886421 1111111 11111
Q ss_pred CccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-... .+ ... ...+--..+.+.++...+.++..... -|.-|+|..-.++++..+- .|..++.+|-+.
T Consensus 91 V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~ 168 (284)
T PRK14193 91 CTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLNEP--APLPCTPRGIVHLLRRYDVELAGAHVVVIGRGV 168 (284)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 110000 00 000 00011112222233333333333322 3567788877777777643 488999999985
Q ss_pred c----CHHHhhh--CCceEeeCCCCCH---HHHhhcCEEec
Q psy3624 707 N----DSPALKK--ADIGIAMGITGSD---VSKQTADMILL 738 (1010)
Q Consensus 707 N----D~~~l~~--A~vgIamg~~~~~---~ak~aAd~vl~ 738 (1010)
. =+.||.. .+..|.+--+.+. ..-..||+++.
T Consensus 169 ~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~ 209 (284)
T PRK14193 169 TVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVA 209 (284)
T ss_pred cchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEE
Confidence 5 2334544 4444443312222 22356898885
No 265
>PRK04980 hypothetical protein; Provisional
Probab=25.83 E-value=76 Score=28.39 Aligned_cols=55 Identities=24% Similarity=0.311 Sum_probs=36.8
Q ss_pred ceEEEeCCeEEEEeCCCccCCcEEEec--CCCeecccEEEEEeCceEEEe-----ecccCCCccccc
Q psy3624 157 YANVIRDGQKKTILSSELVRGDVVDVK--FGDRIPADIRIIESHGFKVDN-----SSLTGEAEPQAR 216 (1010)
Q Consensus 157 ~~~V~R~g~~~~i~~~~Lv~GDiV~l~--~G~~iPaD~~ll~~~~l~Vde-----s~LTGEs~pv~K 216 (1010)
+.--+||+. .+..+|||++.|. .+.+.-|+..+++-....+|| +...|+|.+.-|
T Consensus 20 KTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk 81 (102)
T PRK04980 20 KTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELK 81 (102)
T ss_pred ceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHH
Confidence 344567742 4679999999997 788888999999765433333 344566554333
No 266
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=25.77 E-value=2.1e+02 Score=31.76 Aligned_cols=162 Identities=15% Similarity=0.177 Sum_probs=84.7
Q ss_pred eecCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCC--------cccHHHH----Hhh
Q psy3624 577 SMIDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEG--------SETLEDI----AKR 634 (1010)
Q Consensus 577 ~~~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~~~----~~~ 634 (1010)
.+.+.++++.++.++++++. |++ .++.-||++... ...|+++||.... .+.+.+. .++
T Consensus 63 ~vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D 142 (345)
T PLN02897 63 VIAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNED 142 (345)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 35577889999999999887 764 456778876654 3457788886421 1112222 222
Q ss_pred cCCccccCC-C--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcC
Q psy3624 635 RRVPVSSLD-P--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGD 704 (1010)
Q Consensus 635 ~~~~~~~~~-~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGD 704 (1010)
..++-...+ + ... ...+--..+.+.++...+-++....+.-.|.-|+|..-.++++..+- .|+.++.+|-
T Consensus 143 ~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVIGR 222 (345)
T PLN02897 143 TSIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGR 222 (345)
T ss_pred CCCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECC
Confidence 211110000 0 000 00111112233333333444433211124677888877777776543 4889999999
Q ss_pred Ccc----CHHHhhhCCceEeeCCC-CC--HHHHhhcCEEec
Q psy3624 705 GVN----DSPALKKADIGIAMGIT-GS--DVSKQTADMILL 738 (1010)
Q Consensus 705 g~N----D~~~l~~A~vgIamg~~-~~--~~ak~aAd~vl~ 738 (1010)
+.. =+-||...|.-|.+--+ .. +..-..||+++.
T Consensus 223 S~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIs 263 (345)
T PLN02897 223 SNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIA 263 (345)
T ss_pred CccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEE
Confidence 854 24456666555544311 11 223356898885
No 267
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=25.61 E-value=1.1e+02 Score=27.69 Aligned_cols=9 Identities=11% Similarity=-0.005 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q psy3624 141 AKSARIMDS 149 (1010)
Q Consensus 141 ~k~~~~~~~ 149 (1010)
+|+++..++
T Consensus 26 kKr~K~~~~ 34 (109)
T PRK05886 26 RKAMQATID 34 (109)
T ss_pred HHHHHHHHH
Confidence 333333333
No 268
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=25.01 E-value=4.3e+02 Score=26.61 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=24.8
Q ss_pred HHHHHhCCCccCCCCHHHHHHHhhccCCCCCCCCCCCCHHHHHHHH
Q psy3624 39 DLCARYQTSAEKGLTSAQAKQFLLRDGPNSLTPAKKTPAWVILLKH 84 (1010)
Q Consensus 39 ~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~ 84 (1010)
++.+++. ...++.+|+.+|+++--. .+++++.|..++..
T Consensus 72 ~l~~~~~---~~~~~~~ea~~~L~~I~~----~~~~y~~~~~~l~~ 110 (193)
T PF06738_consen 72 RLSRRIV---AGQLSLEEAIERLDEIDR----EPPRYPPWLVILAA 110 (193)
T ss_pred HHHHHHh---cCCCCHHHHHHHHHHHhh----CCCCCCHHHHHHHH
Confidence 4444444 368999999999988322 22367777655443
No 269
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.14 E-value=1.8e+02 Score=31.50 Aligned_cols=159 Identities=14% Similarity=0.214 Sum_probs=78.1
Q ss_pred cCCCCcchHHHHHHHHH-CCCe---EEEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHH----HHhhcC
Q psy3624 579 IDPPRPAVPDAVAKCRS-AGIR---VIMVTGDHPVTA------KAIAKAVGIISEGS--------ETLED----IAKRRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~-aGi~---v~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~----~~~~~~ 636 (1010)
...++++.++.++.+++ .|++ .++.-||++... ...|+++|+..... +.+.+ ..++..
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~ 89 (281)
T PRK14183 10 SDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPN 89 (281)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCc
Confidence 34577888888999886 4665 355668776544 44677888864211 11111 111111
Q ss_pred CccccCC-C--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSSLD-P--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~~~-~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-...+ + ... ...+-...+.+.++...+.++....+ -|.-|+|..-.++++..+- .|..|+.+|.|.
T Consensus 90 V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~--~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~ 167 (281)
T PRK14183 90 IDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTGLD--GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASN 167 (281)
T ss_pred cCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcCCC--CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCC
Confidence 1110000 0 000 00011111222222323333333222 4667788777777766543 488999999984
Q ss_pred c----CHHHhhhCCceEeeCCCCCH---HHHhhcCEEecC
Q psy3624 707 N----DSPALKKADIGIAMGITGSD---VSKQTADMILLD 739 (1010)
Q Consensus 707 N----D~~~l~~A~vgIamg~~~~~---~ak~aAd~vl~~ 739 (1010)
. =+.||...+.-|.+.-+-+. ..-..||+++.-
T Consensus 168 ~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~A 207 (281)
T PRK14183 168 IVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVG 207 (281)
T ss_pred cchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEe
Confidence 3 24455554444443312222 223568988753
No 270
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=23.83 E-value=3e+02 Score=30.87 Aligned_cols=162 Identities=17% Similarity=0.215 Sum_probs=81.3
Q ss_pred eecCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCC------Cc--ccHHHH----Hhh
Q psy3624 577 SMIDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISE------GS--ETLEDI----AKR 634 (1010)
Q Consensus 577 ~~~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~------~~--~~~~~~----~~~ 634 (1010)
.+.+.++++.++.++++++. |++ .++.-||++... ...|+++||... +. +.+.+. .++
T Consensus 80 ~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D 159 (364)
T PLN02616 80 AVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNND 159 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCC
Confidence 45667888999999999877 664 566678776544 456778888631 11 111111 122
Q ss_pred cCCccccC-CC--CC-----cceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcC
Q psy3624 635 RRVPVSSL-DP--RE-----STTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGD 704 (1010)
Q Consensus 635 ~~~~~~~~-~~--~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGD 704 (1010)
..++-... .+ .. ....+--..+.+.++...+..+....+.-.|.-|+|..-.++++...- .|+.|+.+|-
T Consensus 160 ~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGR 239 (364)
T PLN02616 160 PSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGR 239 (364)
T ss_pred CCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECC
Confidence 11111000 00 00 000011112222333333333332210114677888876666665532 4889999999
Q ss_pred Ccc----CHHHhhhCCceEeeCC-CCCH--HHHhhcCEEec
Q psy3624 705 GVN----DSPALKKADIGIAMGI-TGSD--VSKQTADMILL 738 (1010)
Q Consensus 705 g~N----D~~~l~~A~vgIamg~-~~~~--~ak~aAd~vl~ 738 (1010)
+.. =+-||...|.-|.+-- ...+ ..-..||+++.
T Consensus 240 S~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIs 280 (364)
T PLN02616 240 SNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIIS 280 (364)
T ss_pred CccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEE
Confidence 854 2445555554443331 2221 23356888875
No 271
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.64 E-value=2.3e+02 Score=30.85 Aligned_cols=160 Identities=13% Similarity=0.183 Sum_probs=81.1
Q ss_pred cCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCCc--------ccHHHHHh----hcC
Q psy3624 579 IDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEGS--------ETLEDIAK----RRR 636 (1010)
Q Consensus 579 ~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~~--------~~~~~~~~----~~~ 636 (1010)
.+.++++.++.++.+++. |++ .++.-||++... ...|+++|+..+.. +.+.+..+ +..
T Consensus 11 a~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~ 90 (294)
T PRK14187 11 ANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDS 90 (294)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 456788888999999877 775 466678776544 45677888864211 11211111 111
Q ss_pred CccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCCc
Q psy3624 637 VPVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDGV 706 (1010)
Q Consensus 637 ~~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg~ 706 (1010)
++-... .+ ... ...+--..+.+.++...+.++......-.|.-|+|..-.++++...- .|..++.+|-+.
T Consensus 91 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~ 170 (294)
T PRK14187 91 VHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSN 170 (294)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCc
Confidence 111000 00 000 00011112222333333334432221014677888877777776542 588999999985
Q ss_pred c----CHHHhhhCCceEeeCCCCC-H--HHHhhcCEEec
Q psy3624 707 N----DSPALKKADIGIAMGITGS-D--VSKQTADMILL 738 (1010)
Q Consensus 707 N----D~~~l~~A~vgIamg~~~~-~--~ak~aAd~vl~ 738 (1010)
. =+.||.+.|..|.+--+-+ + ..-..||+++.
T Consensus 171 iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVs 209 (294)
T PRK14187 171 IVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVA 209 (294)
T ss_pred cchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4 2445555555444431222 2 22356888875
No 272
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=22.76 E-value=1.7e+03 Score=28.66 Aligned_cols=21 Identities=10% Similarity=0.287 Sum_probs=12.0
Q ss_pred CCeEEEEeCCCccCCcEEEec
Q psy3624 163 DGQKKTILSSELVRGDVVDVK 183 (1010)
Q Consensus 163 ~g~~~~i~~~~Lv~GDiV~l~ 183 (1010)
-|....+...|.+|-|.+.++
T Consensus 185 pGDiV~l~~Gd~IPaDg~li~ 205 (902)
T PRK10517 185 PGDIIKLAAGDMIPADLRILQ 205 (902)
T ss_pred CCCEEEECCCCEEeeeEEEEE
Confidence 355555566666666655554
No 273
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=22.72 E-value=82 Score=27.55 Aligned_cols=26 Identities=35% Similarity=0.299 Sum_probs=20.5
Q ss_pred eEEEeCCeEEEEeCCCccCCcEEEec
Q psy3624 158 ANVIRDGQKKTILSSELVRGDVVDVK 183 (1010)
Q Consensus 158 ~~V~R~g~~~~i~~~~Lv~GDiV~l~ 183 (1010)
..+.++|+.+.+.+++|++||.|.+.
T Consensus 74 ~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 74 LLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEecCCcEEEEEHHHCCCCCEEEec
Confidence 45556677778999999999999864
No 274
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=22.54 E-value=86 Score=30.63 Aligned_cols=43 Identities=19% Similarity=0.290 Sum_probs=33.4
Q ss_pred EEEEEEeecCCCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Q psy3624 571 RFLGLMSMIDPPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIA 615 (1010)
Q Consensus 571 ~~lG~i~~~d~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia 615 (1010)
.++|+-..- =.+.+.+++++.++.|++++-+||++-...+.++
T Consensus 112 vLigISTSG--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 112 VLIGISTSG--NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred EEEEEeCCC--CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 455544433 4578899999999999999999999977666655
No 275
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=22.29 E-value=1.8e+02 Score=28.95 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=43.4
Q ss_pred EEEecChhhHHHHHHHHHHcCCeEEEEcCCccCHHHhhhCCceEeeCCCCCHHHHhhcCEEecCCCchhHHHHHHHhhhh
Q psy3624 676 VFARTSPTQKLHIVEGCQRLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTADMILLDDNFASIVTGVEEGRLI 755 (1010)
Q Consensus 676 v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIamg~~~~~~ak~aAd~vl~~~~~~~i~~~i~~gR~~ 755 (1010)
.+.-.++++-...++.+++.| .-+.+|++.- +..-++.|+ ..++...+.+++..++.+++++
T Consensus 105 ~~~~~~~~e~~~~i~~~~~~G-~~viVGg~~~-~~~A~~~gl----------------~~v~i~sg~esi~~Al~eA~~i 166 (176)
T PF06506_consen 105 IYPYDSEEEIEAAIKQAKAEG-VDVIVGGGVV-CRLARKLGL----------------PGVLIESGEESIRRALEEALRI 166 (176)
T ss_dssp EEEESSHHHHHHHHHHHHHTT---EEEESHHH-HHHHHHTTS----------------EEEESS--HHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcC-CcEEECCHHH-HHHHHHcCC----------------cEEEEEecHHHHHHHHHHHHHH
Confidence 455567888888889888888 4556777642 333333333 2344455788899999999988
Q ss_pred HHhHHH
Q psy3624 756 FDNLKK 761 (1010)
Q Consensus 756 ~~~i~~ 761 (1010)
.+..++
T Consensus 167 ~~~~~~ 172 (176)
T PF06506_consen 167 ARARRR 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876654
No 276
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=22.10 E-value=3.3e+02 Score=29.74 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=30.0
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHH-HHHHHHcCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTA-KAIAKAVGII 621 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta-~~ia~~~gi~ 621 (1010)
.=.+++...-+.|++.|.+++++|.+....+ ++..+.++..
T Consensus 60 DGP~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 60 DGPPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred CChHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 3467788888899999999999998865444 4455555553
No 277
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=21.84 E-value=65 Score=32.56 Aligned_cols=29 Identities=31% Similarity=0.645 Sum_probs=23.5
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHH
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPV 609 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ 609 (1010)
++-|++.+++++|.+.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56789999999999999999999998754
No 278
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=21.49 E-value=1.4e+02 Score=25.85 Aligned_cols=48 Identities=21% Similarity=0.162 Sum_probs=38.1
Q ss_pred EEEeecC---CCCcchHHHHHHHHHCCCeEEEE-cCCCHHHHHHHHHHcCCC
Q psy3624 574 GLMSMID---PPRPAVPDAVAKCRSAGIRVIMV-TGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 574 G~i~~~d---~l~~~~~~aI~~l~~aGi~v~~~-TGd~~~ta~~ia~~~gi~ 621 (1010)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4455556 66777889999999999998888 666777888888888874
No 279
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.33 E-value=2.1e+02 Score=31.00 Aligned_cols=160 Identities=13% Similarity=0.155 Sum_probs=81.3
Q ss_pred ecCCCCcchHHHHHHHHHC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCCC--------cccHHHHHh----hc
Q psy3624 578 MIDPPRPAVPDAVAKCRSA-GIR---VIMVTGDHPVTA------KAIAKAVGIISEG--------SETLEDIAK----RR 635 (1010)
Q Consensus 578 ~~d~l~~~~~~aI~~l~~a-Gi~---v~~~TGd~~~ta------~~ia~~~gi~~~~--------~~~~~~~~~----~~ 635 (1010)
+..+++++.++.++++++. |.+ .++.-||++... ...|+++|+.... .+.+.+..+ +.
T Consensus 11 va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~ 90 (285)
T PRK10792 11 IAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADP 90 (285)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456788899999999877 442 466678776544 4467788886311 111222211 11
Q ss_pred CCccccC-CC--CCc-----ceeEEechhhhcCCHHHHHHHHhccCcEEEEecChhhHHHHHHHHHH--cCCeEEEEcCC
Q psy3624 636 RVPVSSL-DP--RES-----TTIVIQGSILRDMTTEQLENVLRTHREIVFARTSPTQKLHIVEGCQR--LGAIVAVTGDG 705 (1010)
Q Consensus 636 ~~~~~~~-~~--~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~g~~v~~iGDg 705 (1010)
+++-... .+ ... ...+--..+.+.++...+.++....+ .|.-|+|..-.++++...- .|..|+.+|.|
T Consensus 91 ~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs 168 (285)
T PRK10792 91 TIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQRIP--LLRPCTPRGIMTLLERYGIDTYGLNAVVVGAS 168 (285)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCCCC--CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCC
Confidence 1111000 00 000 00011112222233333333333323 4667888877777777643 48999999998
Q ss_pred cc----CHHHhhhCCceEeeCCCCCH---HHHhhcCEEecC
Q psy3624 706 VN----DSPALKKADIGIAMGITGSD---VSKQTADMILLD 739 (1010)
Q Consensus 706 ~N----D~~~l~~A~vgIamg~~~~~---~ak~aAd~vl~~ 739 (1010)
.. =+.+|...+..|.+--+-+. ..-..||+++..
T Consensus 169 ~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~a 209 (285)
T PRK10792 169 NIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVA 209 (285)
T ss_pred cccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEc
Confidence 63 23345555544444312222 233568888753
No 280
>KOG0209|consensus
Probab=21.18 E-value=8.1e+02 Score=30.63 Aligned_cols=49 Identities=18% Similarity=0.147 Sum_probs=34.4
Q ss_pred CCCcEEEEEEeecCCC---------CcchHHHHHHHHHC-----CCeEEEEcCCCHHHHHHHHHHcCC
Q psy3624 567 LTGLRFLGLMSMIDPP---------RPAVPDAVAKCRSA-----GIRVIMVTGDHPVTAKAIAKAVGI 620 (1010)
Q Consensus 567 e~~l~~lG~i~~~d~l---------~~~~~~aI~~l~~a-----Gi~v~~~TGd~~~ta~~ia~~~gi 620 (1010)
+.+|.+-|+-++..+. ..++.+++..|+.. + +.||+.+.|.--+-...+
T Consensus 492 ~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~-----lVGDPlEKA~l~~v~W~~ 554 (1160)
T KOG0209|consen 492 EDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDK-----LVGDPLEKATLEAVGWNL 554 (1160)
T ss_pred cccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCc-----ccCChHHHHHHHhcCccc
Confidence 4678899998855544 56688888887742 3 899999988655443334
No 281
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=21.11 E-value=9.9e+02 Score=25.48 Aligned_cols=41 Identities=15% Similarity=0.277 Sum_probs=24.3
Q ss_pred hhhHHHHHHHHHHcCCeEEEEcCCcc---CHHHhhhCCceEeeC
Q psy3624 682 PTQKLHIVEGCQRLGAIVAVTGDGVN---DSPALKKADIGIAMG 722 (1010)
Q Consensus 682 p~~K~~iv~~l~~~g~~v~~iGDg~N---D~~~l~~A~vgIamg 722 (1010)
|.+-.+.++.+++....-+++|=|.+ |+..+...-=|+.+|
T Consensus 185 ~~~~~~~i~~vk~~~~~pv~vGfGI~~~e~v~~~~~~ADGviVG 228 (258)
T PRK13111 185 AADLAELVARLKAHTDLPVAVGFGISTPEQAAAIAAVADGVIVG 228 (258)
T ss_pred CccHHHHHHHHHhcCCCcEEEEcccCCHHHHHHHHHhCCEEEEc
Confidence 34556677777776555566788874 444444433356555
No 282
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=20.90 E-value=9.4e+02 Score=26.27 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=26.1
Q ss_pred CCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Q psy3624 582 PRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAKAVGII 621 (1010)
Q Consensus 582 l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~~~gi~ 621 (1010)
.-.|+...+.+. +..+++=|....+...+|+..+++
T Consensus 88 si~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 88 SIKDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred cHHHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 334555556555 455888899999999999988874
No 283
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=20.80 E-value=1.5e+02 Score=26.38 Aligned_cols=14 Identities=36% Similarity=0.366 Sum_probs=6.9
Q ss_pred CCccCCcEEEecCC
Q psy3624 172 SELVRGDVVDVKFG 185 (1010)
Q Consensus 172 ~~Lv~GDiV~l~~G 185 (1010)
++|++||-|....|
T Consensus 42 ~sL~kGD~VvT~gG 55 (97)
T COG1862 42 NSLKKGDEVVTIGG 55 (97)
T ss_pred HhccCCCEEEEcCC
Confidence 34555555554444
No 284
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=20.77 E-value=62 Score=25.12 Aligned_cols=12 Identities=50% Similarity=0.662 Sum_probs=10.0
Q ss_pred cCCcEEEecCCC
Q psy3624 175 VRGDVVDVKFGD 186 (1010)
Q Consensus 175 v~GDiV~l~~G~ 186 (1010)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999874
No 285
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=20.60 E-value=4.3e+02 Score=28.87 Aligned_cols=62 Identities=15% Similarity=0.231 Sum_probs=39.1
Q ss_pred HHHHHhccCcE-EEEecChhhHHHHHHHHHHcCCeEEEEcCC-ccCHHHhhhC-CceEeeCCCCC
Q psy3624 665 LENVLRTHREI-VFARTSPTQKLHIVEGCQRLGAIVAVTGDG-VNDSPALKKA-DIGIAMGITGS 726 (1010)
Q Consensus 665 ~~~~~~~~~~~-v~~r~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~~l~~A-~vgIamg~~~~ 726 (1010)
..++...++.+ |...-+..+-.++.+..++.+..+..+.+- .-|...|+.. .|||.-|.+..
T Consensus 204 ~~~La~~vD~miVVGg~~SsNT~kL~~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaGASTP 268 (298)
T PRK01045 204 VKELAPQADLVIVVGSKNSSNSNRLREVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAGASAP 268 (298)
T ss_pred HHHHHhhCCEEEEECCCCCccHHHHHHHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEecCCCC
Confidence 33444444433 334445567788888888888778888764 3366677644 58998883333
No 286
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=20.22 E-value=5.6e+02 Score=27.27 Aligned_cols=43 Identities=23% Similarity=0.316 Sum_probs=34.4
Q ss_pred CCCcchHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH---HcCCCCC
Q psy3624 581 PPRPAVPDAVAKCRSAGIRVIMVTGDHPVTAKAIAK---AVGIISE 623 (1010)
Q Consensus 581 ~l~~~~~~aI~~l~~aGi~v~~~TGd~~~ta~~ia~---~~gi~~~ 623 (1010)
.+.+++++.|+.+++.|+.|.-+|.+.+.......+ ++||.-.
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs 126 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFS 126 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCcc
Confidence 466789999999999999999999999776655554 4677653
No 287
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=20.18 E-value=7.2e+02 Score=26.17 Aligned_cols=39 Identities=21% Similarity=0.262 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHcC-CeEEEEcCCc---cCHHHhhhCCc-eEeeC
Q psy3624 684 QKLHIVEGCQRLG-AIVAVTGDGV---NDSPALKKADI-GIAMG 722 (1010)
Q Consensus 684 ~K~~iv~~l~~~g-~~v~~iGDg~---ND~~~l~~A~v-gIamg 722 (1010)
+-.+.++.+++.. ...+++|=|. +|+..+..++. |+-+|
T Consensus 171 ~~~~~i~~lr~~~~~~~i~v~gGI~~~e~i~~~~~~gaD~vvvG 214 (244)
T PRK13125 171 SVERNIKRVRNLVGNKYLVVGFGLDSPEDARDALSAGADGVVVG 214 (244)
T ss_pred HHHHHHHHHHHhcCCCCEEEeCCcCCHHHHHHHHHcCCCEEEEC
Confidence 3334444454432 2346678777 36666655554 55555
No 288
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=20.08 E-value=4.3e+02 Score=22.75 Aligned_cols=23 Identities=9% Similarity=0.108 Sum_probs=9.1
Q ss_pred HHHHHHHHh-hhccCCceEEEeCC
Q psy3624 142 KSARIMDSF-KNMVPQYANVIRDG 164 (1010)
Q Consensus 142 k~~~~~~~l-~~~~~~~~~V~R~g 164 (1010)
|+++..+++ +++.+-.--+..+|
T Consensus 26 K~~k~~~~m~~~L~~Gd~VvT~gG 49 (84)
T TIGR00739 26 KRRKAHKKLIESLKKGDKVLTIGG 49 (84)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCC
Confidence 333333333 34444433333444
Done!