BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3629
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54351|NSF2_DROME Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2
SV=2
Length = 752
Score = 284 bits (726), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 139/185 (75%), Positives = 161/185 (87%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNRRDMIDEALLRPGRLE+QMEISLPNE GRVQIL IHT +MR +
Sbjct: 363 IDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDF 422
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K+A DV+ E+AA TKNFSGAELEGLVRAAQS AMNRLIKA +KV VDP+A+EKL +TR
Sbjct: 423 NKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTR 482
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
ADFLHAL+ DIKPAFG++ E LE+ L+RGI+NWG PV E LE G + +QQ+K TESSGLV
Sbjct: 483 ADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTELLEDGMLSVQQAKATESSGLV 542
Query: 181 SVLLE 185
SVL+E
Sbjct: 543 SVLIE 547
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
GPNSGLHIIIFDEIDAICKARG+ GN+GVHDTVVNQLL+K+DGVE+LNNILVIGMTNRR
Sbjct: 322 GPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRR 381
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 382 DMIDEALLRPGRLEV 396
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
Query: 188 KVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLA--YSPDVKRGFIGFSLLQ 245
K PTDELSL+N A N DF E+ K+++++ GPG HYIF L P++ G +GFSL+Q
Sbjct: 13 KCPTDELSLTNKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQ 72
Query: 246 RKWAELSLHQDIDVKPFFFN 265
RKWA LS++Q+IDV+P+ F+
Sbjct: 73 RKWATLSINQEIDVRPYRFD 92
>sp|P46461|NSF1_DROME Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=2
SV=1
Length = 745
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/184 (72%), Positives = 158/184 (85%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGV++LNNILVIGMTNRRDMIDEALLRPGRLE+QMEISLPNE GRVQIL IHT +MR +
Sbjct: 358 IDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREF 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K+ DDV+ KE+AALTKNFSGAELEGLVRAAQS AMNRLIKA KV VDP+A+EKL + R
Sbjct: 418 NKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKVTVDPEAMEKLKVNR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFLH+LE DIKPAFG++ E L++ L+RG++NWG PV LE G +++QQ+K ESSGLV
Sbjct: 478 DDFLHSLEHDIKPAFGTAQEILDNMLARGVINWGAPVSNLLEDGMLYVQQAKAPESSGLV 537
Query: 181 SVLL 184
SVL+
Sbjct: 538 SVLV 541
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 72/75 (96%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
GPNSGLHIIIFDEIDAICK RG+ GN+GVHDTVVNQLL+K+DGV++LNNILVIGMTNRR
Sbjct: 317 GPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRR 376
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 377 DMIDEALLRPGRLEV 391
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 64/86 (74%)
Query: 180 VSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFI 239
++ +L+ K PTDELSL+N A N DF E+ K+ +++ PG+H+IF L + +V G++
Sbjct: 1 MAYILKATKCPTDELSLTNRAIVNVGDFPEEIKYADISPAPGQHFIFALEKTVEVPSGYV 60
Query: 240 GFSLLQRKWAELSLHQDIDVKPFFFN 265
GFSL+QRKWA +S++Q+++V+P+ F+
Sbjct: 61 GFSLVQRKWAMVSINQELEVRPYRFD 86
>sp|Q94392|NSF_CAEEL Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2
Length = 824
Score = 247 bits (630), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 147/184 (79%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGVE+LNNILVIGMTNRRDMIDEALLRPGRLE+QME+SLP+E GR+QIL+IHTA+MR Y
Sbjct: 435 MDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREY 494
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K+ +V+L++++ TKNFSGAELEGLVRAAQS AMNRL+KA K + DP A+EKL I
Sbjct: 495 NKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKLAINS 554
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF +ALE DIKPAFG SDESL FLSRG++ WG V + L+ G + K+ E+SG
Sbjct: 555 GDFDYALENDIKPAFGRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFR 614
Query: 181 SVLL 184
+V+L
Sbjct: 615 TVVL 618
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G++ VHDTVVNQLLSKMDGVE+LNNILVIGMTNRR
Sbjct: 394 GANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRR 453
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 454 DMIDEALLRPGRLEV 468
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 183 LLEVDKVPTDELSLSNFAAANKDDFVE-DTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGF 241
+ V K P++E +L+N+A N+ DF + KH+ V GP HYIF++ +K G I F
Sbjct: 67 MFRVRKAPSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAF 126
Query: 242 SLLQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEAGPNS 284
+ RKWA LSL Q++ V PF F SE++ ++IL A N+
Sbjct: 127 GVPHRKWAALSLDQEVRVTPFTF---QQSEYVGSMILTADFNA 166
>sp|P18708|NSF_CRIGR Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1
Length = 744
Score = 241 bits (616), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A ++ D+ + +H+ V T P YIFTL P V G + FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVSEKDY-QSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVALYSFD 86
>sp|P46459|NSF_HUMAN Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3
Length = 744
Score = 241 bits (616), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCAVVNEKDF-QSGQHVIVRTSPNHRYTFTLKTHPSVVPGSIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVSLYTFD 86
>sp|P46460|NSF_MOUSE Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2
Length = 744
Score = 241 bits (616), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A N+ DF + +H+ V T P YIFTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVNEKDF-QSGQHVMVRTSPNHKYIFTLRTHPSVVPGCIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ QDI+V + F+
Sbjct: 65 PQRKWAGLSIGQDIEVALYSFD 86
>sp|Q9QUL6|NSF_RAT Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1
Length = 744
Score = 241 bits (616), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A N+ D+ + +H+ V T P YIFTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVNEKDY-QSGQHVMVRTSPNHKYIFTLRTHPSVVPGCIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ QDI+V + F+
Sbjct: 65 PQRKWAGLSIGQDIEVALYSFD 86
>sp|Q5R410|NSF_PONAB Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1
Length = 744
Score = 241 bits (615), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAMETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCAVVNEKDF-QSGQHVIVRTSPNHRYTFTLKTHPSVVPGSIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVSLYTFD 86
>sp|Q9P7Q4|SEC18_SCHPO Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sec18 PE=1 SV=1
Length = 792
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 142/184 (77%), Gaps = 2/184 (1%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV++LNNILVIGMTNR+DMIDEALLRPGRLE+ MEISLP+E GR+QIL+IHT++M S
Sbjct: 409 MDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASN 468
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
L +DV+++ELA+LTKNFSGAE+ GL+++A S A R IK V LE + + R
Sbjct: 469 GILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGN-LENIKVNR 527
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL+AL ++++PA+G S+E LE + GI+N+G ++E + G++F+QQ K++E + LV
Sbjct: 528 NDFLNAL-SEVRPAYGVSEEELESRVQGGIINFGKHIEEIITEGKLFVQQVKNSERTRLV 586
Query: 181 SVLL 184
SVLL
Sbjct: 587 SVLL 590
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/75 (82%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G SGLHIIIFDE+DAICK RG++GG+TGV D VVNQLL+KMDGV++LNNILVIGMTNR+
Sbjct: 368 GEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRK 427
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 428 DMIDEALLRPGRLEV 442
>sp|P18759|SEC18_YEAST Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC18 PE=1 SV=2
Length = 758
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 135/185 (72%), Gaps = 2/185 (1%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV++LNNILVIGMTNR+D+ID ALLRPGR E+Q+EI LP+E GR+QI I T KMR
Sbjct: 379 MDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMREN 438
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIK-ATNKVEVDPQALEKLCIT 119
++DDVNL ELAALTKNFSGAE+EGLV++A S A+N+ + +++ + + KL +T
Sbjct: 439 NMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVT 498
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGL 179
R DFL+AL D+ PAFG S+E L+ + G++ + V L+ G +++Q ++++ S L
Sbjct: 499 REDFLNAL-NDVTPAFGISEEDLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDKSRL 557
Query: 180 VSVLL 184
VS+L+
Sbjct: 558 VSLLI 562
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 63/75 (84%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G S LHIIIFDE+D++ K RG+ G TGV D VVNQLL+KMDGV++LNNILVIGMTNR+
Sbjct: 338 GEESSLHIIIFDELDSVFKQRGSRGDGTGVGDNVVNQLLAKMDGVDQLNNILVIGMTNRK 397
Query: 341 DMIDEALLRPGRLEV 355
D+ID ALLRPGR EV
Sbjct: 398 DLIDSALLRPGRFEV 412
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
L+V P + +L+N AA + +DF + I ++FT +S D+ G IGF+
Sbjct: 29 LKVSNCPNNSYALANVAAVSPNDFPNNIYII-----IDNLFVFTTRHSNDIPPGTIGFNG 83
Query: 244 LQRKWAELSLHQDIDVKPF-FFNPKNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKARG 302
QR W SL+QD+ K F F +L +I +ID +ARG
Sbjct: 84 NQRTWGGWSLNQDVQAKAFDLFKYSGKQSYLGSI----------------DIDISFRARG 127
Query: 303 TAGGNTGVHDTVVNQLL 319
A D + Q +
Sbjct: 128 KAVSTVFDQDELAKQFV 144
>sp|Q75JI3|NSF_DICDI Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1
Length = 738
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 130/186 (69%), Gaps = 6/186 (3%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE LNNILVIGMTNR+DMIDEALLRPGRLE+ +EISLP+E GR QI +IHTAKMR
Sbjct: 362 IDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGREQIFKIHTAKMRDQ 421
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATN--KVEVDPQALEKLCI 118
L DVNL A T+N+SGAE+EG+V++A S A +R + N VE+ P+ + K+C
Sbjct: 422 NALDKDVNLANYAHTTRNYSGAEIEGVVKSAASYAFSRQVDTKNIKNVEIKPEDI-KVC- 479
Query: 119 TRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSG 178
DF A+ T++ P+FGS+D E + GI+N+G + L++G F++Q K + +
Sbjct: 480 -DQDFKRAI-TEVTPSFGSTDNQFESYAENGIINYGPVFDKLLQSGNAFVEQVKKSNRTP 537
Query: 179 LVSVLL 184
++SVLL
Sbjct: 538 MMSVLL 543
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 69/75 (92%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G +SGLHIIIFDE+DAICK+RG+ G++GV D+VVNQLL+ +DGVE LNNILVIGMTNR+
Sbjct: 321 GDDSGLHIIIFDELDAICKSRGSRQGDSGVGDSVVNQLLAMIDGVESLNNILVIGMTNRK 380
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 381 DMIDEALLRPGRLEV 395
>sp|P34732|SEC18_CANAX Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3
SV=2
Length = 794
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 125/184 (67%), Gaps = 1/184 (0%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV++LNNILVIGMTNR D+ID ALLRPGR E+Q+EISLP+E GR I IHT K+
Sbjct: 416 MDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTEN 475
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
L+ DVN EL+ LTKNF+GAE+EGL +A+S A++R K ++DP+++ K+ ITR
Sbjct: 476 GILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTKKGALAQIDPESIAKMKITR 535
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL AL DI+PAFG+ +E L GI+ + ++ E G+ I + +E+ L
Sbjct: 536 DDFLLAL-NDIRPAFGTDEEDLSQQAQHGIIQFNQTIRNIFEKGQSIIDVVRSSETEHLR 594
Query: 181 SVLL 184
S+LL
Sbjct: 595 SILL 598
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 63/76 (82%), Gaps = 1/76 (1%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGN-TGVHDTVVNQLLSKMDGVERLNNILVIGMTNR 339
G +S LH+IIFDE+D++ K RG+ + TGV D VVNQLLSKMDGV++LNNILVIGMTNR
Sbjct: 374 GEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNR 433
Query: 340 RDMIDEALLRPGRLEV 355
D+ID ALLRPGR E+
Sbjct: 434 LDLIDTALLRPGRFEI 449
>sp|Q9M0Y8|NSF_ARATH Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2
Length = 742
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 131/185 (70%), Gaps = 3/185 (1%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE LNN+L+IGMTNR+D++DEALLRPGRLE+Q+EISLP+E GR+QILQIHT KM+
Sbjct: 355 IDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKEN 414
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
L D+NL+ELAA TKN+SGAELEG+V++A S A+NR + + + P E + IT
Sbjct: 415 SFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTK--PVEEENIKITM 472
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFLHA+ +++PAFG+S + LE G+++ G + + ++Q K + S LV
Sbjct: 473 EDFLHAI-YEVQPAFGASTDDLERCRLNGMVDCGHRHNHIYKRAMLLVEQVKVSTRSPLV 531
Query: 181 SVLLE 185
+ LLE
Sbjct: 532 TCLLE 536
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G S LH+IIFDEIDAICK+RG+ TGVHD++VNQLL+K+DGVE LNN+L+IGMTNR+
Sbjct: 314 GDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRK 373
Query: 341 DMIDEALLRPGRLEV 355
D++DEALLRPGRLEV
Sbjct: 374 DLLDEALLRPGRLEV 388
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 177/363 (48%), Gaps = 65/363 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E +++VI TNR D ID AL RPGR + ++EI +P+++GR +IL+IHT KM
Sbjct: 310 MDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKM--- 366
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATN--KVEVDPQALEKLCI 118
LA+DV+L+ELA LT F GA+LE L + A A+ R++ + E+ + +E L +
Sbjct: 367 -PLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKV 425
Query: 119 TRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSG 178
TR D F++ K+ E S
Sbjct: 426 TRED--------------------------------------------FMEALKNIEPSA 441
Query: 179 LVSVLLEVDKVPTDELSLSNFAAANKDDFVE-DTKHIEV----TTGPGRHYIFTLAYSPD 233
+ VL+EV V +++ A + VE K+ EV P R L + P
Sbjct: 442 MREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRG---ILLFGPP 498
Query: 234 VKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNP-KNTSEFLCTIILEAGPNSGLHIIIF 291
G +LL + A S I VK P + SE + +I F
Sbjct: 499 ----GTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFF 554
Query: 292 DEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
DEID++ RG G ++ V + VV+QLL+++DG+E L +++VI TNR DMID ALLRPG
Sbjct: 555 DEIDSLAPRRGGIG-DSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPG 613
Query: 352 RLE 354
RLE
Sbjct: 614 RLE 616
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+E L +++VI TNR DMID ALLRPGRLE + I P++ RV+I +IH +R
Sbjct: 584 LDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIH---LRG- 639
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K LADDVN++ELA T+ +SGA++E + R A A+ LIK E +A +KL IT+
Sbjct: 640 KPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITK 699
Query: 121 ADFLHALETDIKPAFGSSD 139
F AL+ ++P+ D
Sbjct: 700 KHFEEALKK-VRPSLTKED 717
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGM 336
I E + II DEID+I R G V VV QLL+ MDG+E +++VI
Sbjct: 267 IFEEAKENAPSIIFIDEIDSIAPKREEVTGE--VERRVVAQLLALMDGLEARGDVIVIAA 324
Query: 337 TNRRDMIDEALLRPGRLE 354
TNR D ID AL RPGR +
Sbjct: 325 TNRPDAIDPALRRPGRFD 342
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 169/360 (46%), Gaps = 59/360 (16%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VIG TNR + +D AL RPGR + ++ I +P+ +GR +ILQIHT M
Sbjct: 307 MDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNM--- 363
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATN--KVEVDPQALEKLCI 118
LA+DV+L LA +T F GA+L L + A A+ R++ + + E+ + L+ L +
Sbjct: 364 -PLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKV 422
Query: 119 TRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSG 178
T DF AL KD E S
Sbjct: 423 TMDDFKEAL--------------------------------------------KDVEPSA 438
Query: 179 LVSVLLEVDKVPTDEL-SLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAYSPDVKR 236
+ VL+EV V +++ L ++ K EV G R L + P
Sbjct: 439 MREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPP--- 495
Query: 237 GFIGFSLLQRKWAELSLHQDIDVK-PFFFNP-KNTSEFLCTIILEAGPNSGLHIIIFDEI 294
G +LL + A S I VK P F+ SE I S II FDEI
Sbjct: 496 -GTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEI 554
Query: 295 DAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
DAI RG ++ V D VVNQLL+++DG+E +++VI TNR D+ID ALLRPGRL+
Sbjct: 555 DAIAPKRGR-DLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLD 613
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+E +++VI TNR D+ID ALLRPGRL+ + + +P+E R+ I +IHT M
Sbjct: 581 LDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMN-- 638
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEV 108
LA+DVNL+ELA T+ ++GA++E L R A A+ I +EV
Sbjct: 639 --LAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEV 684
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 269 TSEFLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERL 328
T E L I EA N+ II DEIDAI R A G V +V QLL+ MDG++
Sbjct: 257 TEENLRKIFEEAEENAP-SIIFIDEIDAIAPKRDEATGE--VERRLVAQLLTLMDGLKGR 313
Query: 329 NNILVIGMTNRRDMIDEALLRPGRLE 354
++VIG TNR + +D AL RPGR +
Sbjct: 314 GQVVVIGATNRPNALDPALRRPGRFD 339
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 171/366 (46%), Gaps = 67/366 (18%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMR-S 59
MDG++ +++VIG TNR D ID AL RPGR + ++EI +P+ +GR +IL IHT M
Sbjct: 318 MDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLG 377
Query: 60 YKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP----QALEK 115
+ + L+E+A T F GA+L LVR AMN L + ++++D + LEK
Sbjct: 378 MSEEEKNKFLEEMADYTYGFVGADLAALVR---ESAMNALRRYLPEIDLDKPIPTEILEK 434
Query: 116 LCITRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTE 175
+ +T DF +AL K E
Sbjct: 435 MVVTEDDFKNAL--------------------------------------------KSIE 450
Query: 176 SSGLVSVLLEVDKVPTDELS-LSNFAAANKD----DFVEDTKHIEVTTGPGRHYIFTLAY 230
S L V++EV V D++ L + K+ ++ + P + ++ Y
Sbjct: 451 PSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLL---Y 507
Query: 231 SPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNP-KNTSEFLCTIILEAGPNSGLHI 288
P +G +LL + A S I +K P + SE I + I
Sbjct: 508 GPP----GVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAI 563
Query: 289 IIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALL 348
+ DEID+I RGT ++GV + +VNQLL+ +DG+E +N ++VIG TNR D++D ALL
Sbjct: 564 VFLDEIDSIAPRRGTTS-DSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALL 622
Query: 349 RPGRLE 354
R GR +
Sbjct: 623 RAGRFD 628
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 21/145 (14%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+E +N ++VIG TNR D++D ALLR GR + + I P+++ R+ IL++HT M
Sbjct: 596 LDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNM--- 652
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
LA DV+L ++A T+ + GA+LE L R A N +P A +++
Sbjct: 653 -PLAPDVDLNDIAQRTEGYVGADLENLCREA----------GMNAYRENPDA---TSVSQ 698
Query: 121 ADFLHALETDIKPAFGSSDESLEHF 145
+FL AL+T I+P S DE + F
Sbjct: 699 KNFLDALKT-IRP---SVDEEVIKF 719
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGM 336
I + II DEID+I R G V VV QLL+ MDG++ +++VIG
Sbjct: 275 IFSKAEETAPSIIFIDEIDSIAPKREEVQGE--VERRVVAQLLTLMDGMKERGHVIVIGA 332
Query: 337 TNRRDMIDEALLRPGRLE 354
TNR D ID AL RPGR +
Sbjct: 333 TNRIDAIDPALRRPGRFD 350
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 165/361 (45%), Gaps = 61/361 (16%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E ++VI TNR D +D AL RPGR + ++EI +P+E GR +IL+IHT M
Sbjct: 317 MDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGM--- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
L+DDVNL LA T F GA++E L ++ AM L + ++++D
Sbjct: 374 -PLSDDVNLSTLADDTHGFVGADIESL---SKEAAMRALRRYLPEIDLD----------- 418
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
E DI P+ + R I+ F + E S +
Sbjct: 419 -------EEDIPPSL----------IDRMIVKR-----------EDFKGALSEVEPSAMR 450
Query: 181 SVLLEVDKVPTDELSLSNFAAANKDDFVE-----DTKHIEVTTGPGRHYIFTLAYSPDVK 235
VL+E+ K+ D++ A N + VE K + P L Y P
Sbjct: 451 EVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAG---VLLYGPP-- 505
Query: 236 RGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDE 293
G +L+ + A + I V+ P + SE +I FDE
Sbjct: 506 --GTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDE 563
Query: 294 IDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRL 353
+D++ RG GGN V + VVNQLL+++DG+E + ++VI TNR D+ID AL+R GR
Sbjct: 564 LDSLAPGRGQTGGNN-VSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRF 622
Query: 354 E 354
+
Sbjct: 623 D 623
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+E + ++VI TNR D+ID AL+R GR + +++ P +GR QIL+IHT
Sbjct: 591 LDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDT--- 647
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAM 96
LA DV+L+ELA + G++L + R A A+
Sbjct: 648 -PLAADVSLRELAERADGYVGSDLANIAREAAIEAL 682
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGM 336
I E + II DE+D+I R G V VV QLL+ MDG+E ++VI
Sbjct: 274 IFEDAKDDSPSIIFIDELDSIAPKREDVTGE--VERRVVAQLLTMMDGLEGRGQVIVIAA 331
Query: 337 TNRRDMIDEALLRPGRLE 354
TNR D +D AL RPGR +
Sbjct: 332 TNRVDAVDPALRRPGRFD 349
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 62/364 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +N++V+ TNR + ID AL R GR + +++I +P+ GR++IL IHT M
Sbjct: 353 MDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNM--- 409
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
KL +DV+L+ +AA T + G++L L A AM ++ + + +++D ++
Sbjct: 410 -KLGEDVDLETIAAETHGYVGSDLASLCSEA---AMQQIREKMDLIDLDEDTID------ 459
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
A+ L +L ++E+F R L P E + + + + GL
Sbjct: 460 AEVLDSLGV-----------TMENF--RYALGVSNP-SALREVAVVEVPNVRWEDIGGLE 505
Query: 181 SV---LLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRG 237
V L+E + P D K + P R +F Y P
Sbjct: 506 EVKRELIESVQYPVDH----------------PEKFQKFGLSPSRGVLF---YGPP---- 542
Query: 238 FIGFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFD 292
G ++L + A I VK +F SE I + + ++ D
Sbjct: 543 GTGKTMLAKAVANECAANFISVKGPELLSMWFG---ESESNIRDIFDKARAAAPCVVFLD 599
Query: 293 EIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
E+D+I K+RG + G+ G D VVNQLL++MDG+ N+ VIG TNR + +D AL+RPG
Sbjct: 600 ELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPG 659
Query: 352 RLEV 355
RL+
Sbjct: 660 RLDT 663
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ VIG TNR + +D AL+RPGRL+ + + LP++ R IL+ K
Sbjct: 630 MDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKT--- 686
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
+A DV+++ +A+ T FSGA+L + + A A+ I A
Sbjct: 687 -PVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISA 727
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II DEID+I R G V VV+QLL+ MDG++ +N++V+ TNR + ID AL
Sbjct: 321 IIFIDEIDSIAPKREKTNGE--VERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPAL 378
Query: 348 LRPGRLE 354
R GR +
Sbjct: 379 RRFGRFD 385
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESS 177
+T DF R L+ P L + + Q +
Sbjct: 447 VTMDDF------------------------RWALSQSNP--SALRETVVEVPQVTWEDIG 480
Query: 178 GLVSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRG 237
GL V E+ + L + + D F ++ P + +F Y P
Sbjct: 481 GLEDVKRELQE-------LVQYPVEHPDKF------LKFGMTPSKGVLF---YGPP---- 520
Query: 238 FIGFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFD 292
G +LL + A I +K +F SE I + + ++ FD
Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFG---ESEANVREIFDKARQAAPCVLFFD 577
Query: 293 EIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
E+D+I KARG G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A+LRPG
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 352 RLE 354
RL+
Sbjct: 638 RLD 640
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ + K
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK---- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA 95
+A DV+L+ LA +T FSGA+L + + A A
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TNR + ID AL
Sbjct: 300 IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL 357
Query: 348 LRPGRLE 354
R GR +
Sbjct: 358 RRFGRFD 364
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESS 177
+T DF R L+ P L + + Q +
Sbjct: 447 VTMDDF------------------------RWALSQSNP--SALRETVVEVPQVTWEDIG 480
Query: 178 GLVSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRG 237
GL V E+ + L + + D F ++ P + +F Y P
Sbjct: 481 GLEDVKRELQE-------LVQYPVEHPDKF------LKFGMTPSKGVLF---YGPP---- 520
Query: 238 FIGFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFD 292
G +LL + A I +K +F SE I + + ++ FD
Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFG---ESEANVREIFDKARQAAPCVLFFD 577
Query: 293 EIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
E+D+I KARG G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A+LRPG
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 352 RLE 354
RL+
Sbjct: 638 RLD 640
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ + K
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK---- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA 95
+A DV+L+ LA +T FSGA+L + + A A
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 278 LEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
E + II DE+DAI R G V +V+QLL+ MDG+++ +++V+ T
Sbjct: 290 FEEAEKNAPAIIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAAT 347
Query: 338 NRRDMIDEALLRPGRLE 354
NR + ID AL R GR +
Sbjct: 348 NRPNSIDPALRRFGRFD 364
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESS 177
+T DF R L+ P L + + Q +
Sbjct: 447 VTMDDF------------------------RWALSQSNP--SALRETVVEVPQVTWEDIG 480
Query: 178 GLVSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRG 237
GL V E+ + L + + D F ++ P + +F Y P
Sbjct: 481 GLEDVKRELQE-------LVQYPVEHPDKF------LKFGMTPSKGVLF---YGPP---- 520
Query: 238 FIGFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFD 292
G +LL + A I +K +F SE I + + ++ FD
Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFG---ESEANVREIFDKARQAAPCVLFFD 577
Query: 293 EIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
E+D+I KARG G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A+LRPG
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 352 RLE 354
RL+
Sbjct: 638 RLD 640
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ + K
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK---- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA 95
+A DV+L+ LA +T FSGA+L + + A A
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 278 LEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
E + II DE+DAI R G V +V+QLL+ MDG+++ +++V+ T
Sbjct: 290 FEEAEKNAPAIIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAAT 347
Query: 338 NRRDMIDEALLRPGRLE 354
NR + ID AL R GR +
Sbjct: 348 NRPNSIDPALRRFGRFD 364
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESS 177
+T DF R L+ P L + + Q +
Sbjct: 447 VTMDDF------------------------RWALSQSNP--SALRETVVEVPQVTWEDIG 480
Query: 178 GLVSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRG 237
GL V E+ + L + + D F ++ P + +F Y P
Sbjct: 481 GLEDVKRELQE-------LVQYPVEHPDKF------LKFGMTPSKGVLF---YGPP---- 520
Query: 238 FIGFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFD 292
G +LL + A I +K +F SE I + + ++ FD
Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFG---ESEANVREIFDKARQAAPCVLFFD 577
Query: 293 EIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
E+D+I KARG G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A+LRPG
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 352 RLE 354
RL+
Sbjct: 638 RLD 640
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ + K
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK---- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA 95
+A DV+L+ LA +T FSGA+L + + A A
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 278 LEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
E + II DE+DAI R G V +V+QLL+ MDG+++ +++V+ T
Sbjct: 290 FEEAEKNAPAIIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAAT 347
Query: 338 NRRDMIDEALLRPGRLE 354
NR + ID AL R GR +
Sbjct: 348 NRPNSIDPALRRFGRFD 364
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 169/363 (46%), Gaps = 63/363 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESS 177
+T DF R L+ P L + + Q +
Sbjct: 447 VTMDDF------------------------RWALSQSNP--SALRETVVEVPQVTWEDIG 480
Query: 178 GLVSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRG 237
GL V E+ L + + D F ++ P + +F Y P
Sbjct: 481 GLEDVKRELQ-------DLVQYPVEHPDKF------LKFGMTPSKGVLF---YGPP---- 520
Query: 238 FIGFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFD 292
G +LL + A I +K +F SE I + + ++ FD
Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFG---ESEANVREIFDKARQAAPCVLFFD 577
Query: 293 EIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
E+D+I KARG G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A+LRPG
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 352 RLE 354
RL+
Sbjct: 638 RLD 640
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ + K
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK---- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA 95
+A DV+L+ LA +T FSGA+L + + A A
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLA 698
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 278 LEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
E + II DE+DAI R G V +V+QLL+ MDG+++ +++V+ T
Sbjct: 290 FEEAEKNAPAIIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAAT 347
Query: 338 NRRDMIDEALLRPGRLE 354
NR + ID AL R GR +
Sbjct: 348 NRPNSIDPALRRFGRFD 364
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KL+DDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESS 177
+T DF R L+ P L + + Q +
Sbjct: 447 VTMDDF------------------------RWALSQSNP--SALRETVVEVPQVTWEDIG 480
Query: 178 GLVSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRG 237
GL V E+ + L + + D F ++ P + +F Y P
Sbjct: 481 GLEDVKRELQE-------LVQYPVEHPDKF------LKFGMTPSKGVLF---YGP----P 520
Query: 238 FIGFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFD 292
G +LL + A I +K +F SE I + + ++ FD
Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFG---ESEANVREIFDKARQAAPCVLFFD 577
Query: 293 EIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
E+D+I KARG G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A+LRPG
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPG 637
Query: 352 RLE 354
RL+
Sbjct: 638 RLD 640
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R+ IL+ + K
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK---- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAM 96
+A DV+L LA +T FSGA+L + + A A+
Sbjct: 664 SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAI 699
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 278 LEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
E + II DE+DAI R G V +V+QLL+ MDG+++ +++V+ T
Sbjct: 290 FEEAEKNAPAIIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAAT 347
Query: 338 NRRDMIDEALLRPGRLE 354
NR + ID AL R GR +
Sbjct: 348 NRPNSIDPALRRFGRFD 364
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KL+DDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESS 177
+T DF R L+ P L + + Q +
Sbjct: 447 VTMDDF------------------------RWALSQSNP--SALRETVVEVPQVTWEDIG 480
Query: 178 GLVSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRG 237
GL V E+ + L + + D F ++ P + +F Y P
Sbjct: 481 GLEDVKRELQE-------LVQYPVEHPDKF------LKFGMTPSKGVLF---YGPP---- 520
Query: 238 FIGFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFD 292
G +LL + A I +K +F SE I + + ++ FD
Sbjct: 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFG---ESEANVREIFDKARQAAPCVLFFD 577
Query: 293 EIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
E+D+I KARG G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A+LRPG
Sbjct: 578 ELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPG 637
Query: 352 RLE 354
RL+
Sbjct: 638 RLD 640
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R+ IL+ + K
Sbjct: 608 MDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRK---- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVD----PQALE 114
+A DV++ LA +T FSGA+L + + A A+ I+ + E D P A+E
Sbjct: 664 SPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAME 721
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 278 LEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
E + II DE+DAI R G V +V+QLL+ MDG+++ +++V+ T
Sbjct: 290 FEEAEKNAPAIIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAAT 347
Query: 338 NRRDMIDEALLRPGRLE 354
NR + ID AL R GR +
Sbjct: 348 NRPNSIDPALRRFGRFD 364
>sp|Q5UQE0|YR476_MIMIV Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R476 PE=3 SV=1
Length = 855
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 79/108 (73%), Gaps = 4/108 (3%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E NN++ IG+TNR +++D A +R GR + ++I LP+++GRV+I QIHT K++
Sbjct: 709 MDGLEVFNNLICIGITNRLELLDPATIRSGRFGIHIKIDLPDQEGRVKIFQIHTKKLQEL 768
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEV 108
+L+DDV++ +LA +T+ FSGA++EG+V A ++ RL NK++V
Sbjct: 769 NRLSDDVDISKLAVITEEFSGADIEGMVELASVYSLERL----NKLDV 812
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G S +++++ DEIDA+ +R + GN V D+VVNQ L++MDG+E NN++ IG+TNR
Sbjct: 669 GDKSPVYMVVIDEIDAMLPSRSGSDGNP-VRDSVVNQFLAEMDGLEVFNNLICIGITNRL 727
Query: 341 DMIDEALLRPGRLEV 355
+++D A +R GR +
Sbjct: 728 ELLDPATIRSGRFGI 742
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 174/362 (48%), Gaps = 60/362 (16%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV+ +N++VI TNR + ID AL R GR + +++I +P+ GR++IL+IHT M
Sbjct: 338 MDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM--- 394
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE-VDPQALEKLCIT 119
KLADDV+L+++A F GA+L A C+ L + K+E +D LE I
Sbjct: 395 -KLADDVDLEQIANECHGFVGADL------ASLCSEAALQQIREKMELID---LEDDQID 444
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGL 179
A+ L++L ++E+F G L + + ++ GL
Sbjct: 445 -AEVLNSLAV-----------TMENFR----FAQGKSSPSALREAVVETPNTTWSDIGGL 488
Query: 180 VSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFI 239
+V E+ + L + + + K+++ P R +F Y P
Sbjct: 489 QNVKRELQE-------LVQYPVEHPE------KYLKFGMQPSRGVLF---YGPP----GC 528
Query: 240 GFSLLQRKWAELSLHQDIDVK-----PFFFNPKNTSEFLCTIILEAGPNSGLHIIIFDEI 294
G +LL + A I +K +F SE + + + ++ FDE+
Sbjct: 529 GKTLLAKAIANECQANFISIKGPELLTMWFG---ESEANVRDVFDKARAAAPCVLFFDEL 585
Query: 295 DAICKARGTAGGNTGV--HDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGR 352
D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A+LRPGR
Sbjct: 586 DSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGR 645
Query: 353 LE 354
L+
Sbjct: 646 LD 647
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R QIL+ K
Sbjct: 615 MDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKT--- 671
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
L+ D++L LA T FSGA+L + + A A+ I+ ++E + Q
Sbjct: 672 -PLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQ 721
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ DEIDAI R G V +V+QLL+ MDGV+ +N++VI TNR + ID AL
Sbjct: 306 ILFIDEIDAIAPKREKTNGE--VERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGAL 363
Query: 348 LRPGRLE 354
R GR +
Sbjct: 364 RRFGRFD 370
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 9/139 (6%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VIG TNR D ID AL RPGR + ++EI P+ GR ILQ+HT M
Sbjct: 340 MDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNM--- 396
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKAT----NKVEVDPQALEKL 116
+ DDV+L +LA +T ++GA+L L + A A+ R + ++ + + +++L
Sbjct: 397 -PITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAEIIKEL 455
Query: 117 CITRADFLHALETDIKPAF 135
++ DFL+AL++ I+P+
Sbjct: 456 KVSMNDFLNALKS-IQPSL 473
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ LN +++I TNR D++D ALLRPGR + + + P++ R +IL++HT +
Sbjct: 616 MDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNV--- 672
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
LA+DV+L+++A + ++GA+LE LVR A AM + +K D C +
Sbjct: 673 -PLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQSRDECKGNMECYQK 731
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLS 147
H E K +F S E E L+
Sbjct: 732 ----HIKECMNKTSFKVSKEDFEKALN 754
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
+I FDEID+I RG + ++GV + +VNQLL++MDG+ LN +++I TNR D++D AL
Sbjct: 583 VIFFDEIDSIAPIRGLST-DSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPAL 641
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 642 LRPGRFD 648
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 173 DTESSGLVSVL----LEVDKVPTDELSLSNFAAANKD--DFVEDTKHI-EVTTGPGRHYI 225
+T+ S V V +E+ + P E SL+ + +D D E + I E+ P RH
Sbjct: 177 NTQPSNYVYVTGSTNIEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPE 236
Query: 226 FTLAYSPDVKRGFI-------GFSLLQRKWAELSLHQDIDVKPFFFN---PKNTSEF--- 272
D +G + G +LL R A ++ +F P+ S+F
Sbjct: 237 LFQRLGIDPPKGILLYGPPGTGKTLLARALAN-------EIGAYFITVNGPEIMSKFYGE 289
Query: 273 ----LCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERL 328
+ I EA N+ II DEIDAI R G V VV QLL+ MDG++
Sbjct: 290 SEQRIREIFKEAEENAP-SIIFIDEIDAIAPKREDVTGE--VEKRVVAQLLTLMDGIKGR 346
Query: 329 NNILVIGMTNRRDMIDEALLRPGRLE 354
++VIG TNR D ID AL RPGR +
Sbjct: 347 GRVIVIGATNRPDAIDPALRRPGRFD 372
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 75/118 (63%), Gaps = 5/118 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +++VI TNR D++D ALLRPGR + Q+ + LP+ GR IL+IHT +
Sbjct: 333 MDGFEPHQDVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDRRGREAILRIHTRGI--- 389
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCI 118
+ADD++L+ELAA T FSGA+L LV A A + K +++ D +AL+K+ +
Sbjct: 390 -PVADDLDLEELAAATPGFSGADLANLVNEAALMAARKNKKIVERIDFD-EALDKIVL 445
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
+ E S I+ DE+DA+ + R G GGN T+ NQLL +MDG E +++VI
Sbjct: 287 LFERAKASAPSIMFVDELDAVGRQRFAGLGGGNDEREQTL-NQLLVEMDGFEPHQDVIVI 345
Query: 335 GMTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 346 AATNRPDVLDPALLRPGRFD 365
>sp|Q9YAC7|PAN_AERPE Proteasome-activating nucleotidase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=pan
PE=3 SV=1
Length = 409
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 13/116 (11%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + L+N+ VI TNR D+ID A+LRPGR + +E+ LP+ GR++IL IHT K
Sbjct: 270 LDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKA--- 326
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLV---------RAAQSCAMNRLIKATNKVE 107
K+A DV+L+ +A LT+ FSGA+L+ +V R ++ M+ +IKA KV+
Sbjct: 327 -KMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVK 381
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 288 IIIFDEIDAICKARGTAG--GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R G G+ V T++ QLL+++DG + L+N+ VI TNR D+ID
Sbjct: 235 ILFIDEIDAIASKRVDIGTSGDREVQRTML-QLLAELDGFDPLDNVKVIAATNRLDLIDP 293
Query: 346 ALLRPGRLE 354
A+LRPGR +
Sbjct: 294 AVLRPGRFD 302
>sp|Q9ZPR1|CD48B_ARATH Cell division control protein 48 homolog B OS=Arabidopsis thaliana
GN=CDC48B PE=2 SV=1
Length = 603
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E ILV+ TNR ID AL+RPGR +L + + P+ + R +ILQ+HT M
Sbjct: 418 MDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNM--- 474
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKAT 103
L DDV+L+++A T F+GAELEGL R + + ++ I AT
Sbjct: 475 -TLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAAT 516
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
++V+ TNR D ID AL R GR + +E+S PNE+ R++ILQ++T K+ L V+L
Sbjct: 165 VVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKV----NLDPSVDL 220
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNR 98
+ +A + GA+LE L R A A R
Sbjct: 221 QAIAISCNGYVGADLEALCREATISASKR 249
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 288 IIIFDEIDAICKARG--TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II FDE D + RG ++ ++ V + +++ LL++MDG+E ILV+ TNR ID
Sbjct: 382 IIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDA 441
Query: 346 ALLRPGRLEV 355
AL+RPGR ++
Sbjct: 442 ALMRPGRFDL 451
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNN---ILVIGMTNRRDMID 344
+I DEID +C R A V + +QL + MD + ++ ++V+ TNR D ID
Sbjct: 122 VIFIDEIDVLCPRRD-ARREQDVR--IASQLFTLMDSNKPSSSAPRVVVVASTNRVDAID 178
Query: 345 EALLRPGRLEV 355
AL R GR +
Sbjct: 179 PALRRAGRFDA 189
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 76/132 (57%), Gaps = 19/132 (14%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VIG TNR D++D A+LRPGR + +E+ LP +GR+QI +IHT KM
Sbjct: 272 LDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKM--- 328
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
KLA+DV+ KELA +T+ SGA+++ + A A+ E+ +T
Sbjct: 329 -KLAEDVDFKELARITEGASGADIKAICTEAGMFAIRE---------------ERAKVTM 372
Query: 121 ADFLHALETDIK 132
DF A+E +K
Sbjct: 373 LDFTKAIEKVLK 384
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 288 IIIFDEIDAICKARGTA--GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DE+DAI R + G+ V T++ QLL+++DG + ++ VIG TNR D++D
Sbjct: 237 IIFIDELDAIAARRTNSDTSGDREVQRTMM-QLLAELDGFDPRGDVKVIGATNRIDILDP 295
Query: 346 ALLRPGRLE 354
A+LRPGR +
Sbjct: 296 AILRPGRFD 304
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 13/115 (11%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + L++I VI TNR+D++D ALLRPGR + ++I LP+E+GR +I +IHT M
Sbjct: 310 MDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDM--- 366
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA---------MNRLIKATNKV 106
LA+DV+L++LA +T+ SGA+++ + A A M+ +KA ++V
Sbjct: 367 -NLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRV 420
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 273 LCTIILEAGPNSGLHIIIFDEIDAIC--KARGTAGGNTGVHDTVVNQLLSKMDGVERLNN 330
L + E II DEIDAI + R G+ V T+ QLL++MDG + L++
Sbjct: 260 LVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTL-TQLLAEMDGFDPLDD 318
Query: 331 ILVIGMTNRRDMIDEALLRPGRLE 354
I VI TNR+D++D ALLRPGR +
Sbjct: 319 IKVIAATNRKDILDPALLRPGRFD 342
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +++VI TNR D++D ALLRPGR + Q+ + LP++ GR IL+IHT +
Sbjct: 381 MDGFEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPDKRGRAAILRIHTRGI--- 437
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCI 118
+A DV+L+ LAA T FSGA+L LV A A R + ++ + + +AL+K+ +
Sbjct: 438 -PIAPDVDLEGLAAATPGFSGADLANLVNEAALVAARRGKQVVDRSDFE-EALDKMLL 493
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DE+DA+ + R G GN T+ NQLL +MDG E +++VI TNR D++D
Sbjct: 346 IIFIDELDAVGRQRFAGLGVGNDEREQTL-NQLLVEMDGFEAHTDVVVIAATNRPDVLDP 404
Query: 346 ALLRPGRLE 354
ALLRPGR +
Sbjct: 405 ALLRPGRFD 413
>sp|B2UMY1|FTSH_AKKM8 ATP-dependent zinc metalloprotease FtsH OS=Akkermansia muciniphila
(strain ATCC BAA-835) GN=ftsH PE=3 SV=1
Length = 812
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +N++VI TNR D++D ALLRPGR + Q+ ++LP+ GR QILQ+H K+
Sbjct: 423 MDGFENNSNVIVIAATNRADILDPALLRPGRFDRQVVVNLPDVRGREQILQVHARKV--- 479
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K+A V+ + +A T FSGA+L LV A A + +K + E++ +A +K+ R
Sbjct: 480 -KMAPGVSFERIARGTSGFSGAQLANLVNEAALLAARKGLKEITEAELE-EARDKVSWGR 537
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
+ E + +I DEIDA+ + RG GG + +N LL +MDG E +N++VI
Sbjct: 377 MFEQAKRTAPSLIFIDEIDAVGRQRGYGMGGGNDEREQTLNALLVEMDGFENNSNVIVIA 436
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 437 ATNRADILDPALLRPGRFD 455
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei (strain
6A8) GN=pan PE=3 SV=1
Length = 436
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 19/128 (14%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E ++ +IG TNR D++D+ALLRPGR + +EI LP+E+GR+ IL++HT +
Sbjct: 309 MDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTL--- 365
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ + VNL E+A LT+ +GA+L + A A+ E+ ITR
Sbjct: 366 -TMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRN---------------ERPAITR 409
Query: 121 ADFLHALE 128
DFL A+E
Sbjct: 410 EDFLSAIE 417
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 288 IIIFDEIDAICKARGTA--GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDA+ +R A G+ V T++ QLL+ MDG E ++ +IG TNR D++D+
Sbjct: 274 IIFIDEIDAVGASRTEANTSGDREVQRTLM-QLLAGMDGFETRGDVKIIGATNRIDILDK 332
Query: 346 ALLRPGRLE 354
ALLRPGR +
Sbjct: 333 ALLRPGRFD 341
>sp|A9WSI4|ARC_RENSM Proteasome-associated ATPase OS=Renibacterium salmoninarum (strain
ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB
2235) GN=arc PE=3 SV=1
Length = 594
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
++ FDE+D++ + RGT G ++ V T+V QLLS++DGVERL+N++VIG +NR DMID A+
Sbjct: 351 VVFFDEMDSLFRTRGT-GVSSDVETTIVPQLLSEIDGVERLDNVIVIGASNREDMIDPAI 409
Query: 348 LRPGRLEV 355
LRPGRL+V
Sbjct: 410 LRPGRLDV 417
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQIL 50
+DGVERL+N++VIG +NR DMID A+LRPGRL+++++I P+ + I
Sbjct: 384 IDGVERLDNVIVIGASNREDMIDPAILRPGRLDVKVKIQRPDAEAAADIF 433
>sp|A0JWY3|ARC_ARTS2 Proteasome-associated ATPase OS=Arthrobacter sp. (strain FB24)
GN=arc PE=3 SV=1
Length = 594
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 14/113 (12%)
Query: 256 DIDVKPFFFNPKNTS-------------EFLCTIILEAGPNSGLHIIIFDEIDAICKARG 302
++D+K +F N K + + E + ++ FDE+D++ + RG
Sbjct: 306 NVDLKSYFLNIKGPELLDKYVGETERHIRLIFSRAREKASDGSPVVVFFDEMDSLFRTRG 365
Query: 303 TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLEV 355
T G ++ V T+V QLLS++DGVERL+N++VIG +NR DMID A+LRPGRL+V
Sbjct: 366 T-GISSDVETTIVPQLLSEIDGVERLDNVIVIGASNREDMIDPAILRPGRLDV 417
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 16/114 (14%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVERL+N++VIG +NR DMID A+LRPGRL+++++I P+ + I Y
Sbjct: 384 IDGVERLDNVIVIGASNREDMIDPAILRPGRLDVKVKIQRPDAEAAADIF---------Y 434
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALE 114
K + D+ E AE G V+A + R ++A E + LE
Sbjct: 435 KYITTDLPFHESDL-------AEHSGDVQATVDAMIQRTVEAMYSTEKSNEYLE 481
>sp|B8H8L3|ARC_ARTCA Proteasome-associated ATPase OS=Arthrobacter chlorophenolicus
(strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=arc
PE=3 SV=1
Length = 583
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 71/113 (62%), Gaps = 14/113 (12%)
Query: 256 DIDVKPFFFNPKNT---------SEFLCTIIL----EAGPNSGLHIIIFDEIDAICKARG 302
++D+K +F N K +E +I E + ++ FDE+D++ + RG
Sbjct: 295 NVDLKSYFLNIKGPELLDKYVGETERHIRLIFARAREKASDGSPVVVFFDEMDSLFRTRG 354
Query: 303 TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLEV 355
T G ++ V T+V QLLS++DGVERL+N++VIG +NR DMID A+LRPGRL+V
Sbjct: 355 T-GISSDVETTIVPQLLSEIDGVERLDNVIVIGASNREDMIDPAILRPGRLDV 406
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQIL 50
+DGVERL+N++VIG +NR DMID A+LRPGRL+++++I P+ + I
Sbjct: 373 IDGVERLDNVIVIGASNREDMIDPAILRPGRLDVKVKIHRPDAEAAADIF 422
>sp|B1MAH2|ARC_MYCA9 Proteasome-associated ATPase OS=Mycobacterium abscessus (strain
ATCC 19977 / DSM 44196) GN=mpa PE=3 SV=1
Length = 602
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 71/126 (56%), Gaps = 16/126 (12%)
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTII--------------LEAGPNSGLHII 289
L +K AEL + K +F N K E L + E + I+
Sbjct: 303 LAKKMAELRGDDSREAKSYFLNIKG-PELLNKFVGETERHIRLIFQRAREKASDGTPVIV 361
Query: 290 IFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLR 349
FDE+D+I + RGT G ++ V TVV QLLS++DGVE L N++VIG +NR DMID A+LR
Sbjct: 362 FFDEMDSIFRTRGT-GVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 420
Query: 350 PGRLEV 355
PGRL+V
Sbjct: 421 PGRLDV 426
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN 42
+DGVE L N++VIG +NR DMID A+LRPGRL+++++I P+
Sbjct: 393 IDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 434
>sp|A1R6Q4|ARC_ARTAT Proteasome-associated ATPase OS=Arthrobacter aurescens (strain TC1)
GN=arc PE=3 SV=1
Length = 602
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
++ FDE+D++ + RGT G ++ V T+V QLLS++DGVERL+N++VIG +NR DMID A+
Sbjct: 359 VVFFDEMDSLFRTRGT-GVSSDVETTIVPQLLSEIDGVERLDNVIVIGASNREDMIDPAI 417
Query: 348 LRPGRLEV 355
LRPGRL+V
Sbjct: 418 LRPGRLDV 425
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQIL 50
+DGVERL+N++VIG +NR DMID A+LRPGRL+++++I P+ + I
Sbjct: 392 IDGVERLDNVIVIGASNREDMIDPAILRPGRLDVKVKIQRPDAEAAADIF 441
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + ++ +IG TNR D++D A+LRPGR + +E+ P+E GR++IL+IHT KM
Sbjct: 301 MDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKM--- 357
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRL 99
LA+DVNL+E+A +T+ GAEL+ + A A+ L
Sbjct: 358 -NLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIREL 395
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 288 IIIFDEIDAICKARGTA--GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R A GG+ V T++ QLL++MDG + ++ +IG TNR D++D
Sbjct: 266 IIFIDEIDAIAAKRTDALTGGDREVQRTLM-QLLAEMDGFDARGDVKIIGATNRPDILDP 324
Query: 346 ALLRPGRLE 354
A+LRPGR +
Sbjct: 325 AILRPGRFD 333
>sp|Q980M1|PAN_SULSO Proteasome-activating nucleotidase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pan
PE=3 SV=1
Length = 393
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 13/132 (9%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + L+N+ +I TNR D++D ALLRPGR + +E+ LP+ GR +I I+ KM
Sbjct: 265 LDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKM--- 321
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL-VRAA--------QSCAMNRLIKATNKVEVDPQ 111
K+ D++NL+ L+ LT+ FSGA+++ + V AA MN L++A NK+ V
Sbjct: 322 -KIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINVKRN 380
Query: 112 ALEKLCITRADF 123
+E + R +
Sbjct: 381 KMESMKERREKY 392
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTAG--GNTGVHDTVVNQLLSKMDGVERLNNILVI 334
+ E II DEIDAI R G G + T++ QLL+++DG + L+N+ +I
Sbjct: 219 LFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLM-QLLAELDGFDPLDNVKII 277
Query: 335 GMTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 278 AATNRIDILDPALLRPGRFD 297
>sp|Q0RLU1|ARC_FRAAA Proteasome-associated ATPase OS=Frankia alni (strain ACN14a) GN=arc
PE=3 SV=2
Length = 601
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE+D+I + RG+ G ++ V +T+V QLLS++DGVE+L N++VIG +NR DMID A+
Sbjct: 358 IVFFDEMDSIFRTRGS-GVSSDVENTIVPQLLSEIDGVEQLENVIVIGASNREDMIDPAI 416
Query: 348 LRPGRLEV 355
LRPGRL+V
Sbjct: 417 LRPGRLDV 424
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 36/42 (85%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN 42
+DGVE+L N++VIG +NR DMID A+LRPGRL++++++ P+
Sbjct: 391 IDGVEQLENVIVIGASNREDMIDPAILRPGRLDVKIKVERPD 432
>sp|Q2J9Q0|ARC_FRASC Proteasome-associated ATPase OS=Frankia sp. (strain CcI3) GN=arc
PE=3 SV=1
Length = 602
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE+D+I + RG+ G ++ V +T+V QLLS++DGVE+L N++VIG +NR DMID A+
Sbjct: 359 IVFFDEMDSIFRTRGS-GVSSDVENTIVPQLLSEIDGVEQLENVIVIGASNREDMIDPAI 417
Query: 348 LRPGRLEV 355
LRPGRL+V
Sbjct: 418 LRPGRLDV 425
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 36/42 (85%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN 42
+DGVE+L N++VIG +NR DMID A+LRPGRL++++++ P+
Sbjct: 392 IDGVEQLENVIVIGASNREDMIDPAILRPGRLDVKIKVERPD 433
>sp|A0PQT9|ARC_MYCUA Proteasome-associated ATPase OS=Mycobacterium ulcerans (strain
Agy99) GN=mpa PE=3 SV=1
Length = 609
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 16/126 (12%)
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEA-------------GPNSGLHIII 290
L +K AE+ + K +F N K E L + E + G +I+
Sbjct: 310 LAKKMAEVRGDDSREAKSYFLNIKG-PELLNKFVGETERHIRLIFQRAREKASEGTPVIV 368
Query: 291 F-DEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLR 349
F DE+D+I + RGT G ++ V TVV QLLS++DGVE L N++VIG +NR DMID A+LR
Sbjct: 369 FFDEMDSIFRTRGT-GVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 427
Query: 350 PGRLEV 355
PGRL+V
Sbjct: 428 PGRLDV 433
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN 42
+DGVE L N++VIG +NR DMID A+LRPGRL+++++I P+
Sbjct: 400 IDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441
>sp|B2HFW2|ARC_MYCMM Proteasome-associated ATPase OS=Mycobacterium marinum (strain ATCC
BAA-535 / M) GN=mpa PE=3 SV=1
Length = 609
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 16/126 (12%)
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEA-------------GPNSGLHIII 290
L +K AE+ + K +F N K E L + E + G +I+
Sbjct: 310 LAKKMAEVRGDDSREAKSYFLNIKG-PELLNKFVGETERHIRLIFQRAREKASEGTPVIV 368
Query: 291 F-DEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLR 349
F DE+D+I + RGT G ++ V TVV QLLS++DGVE L N++VIG +NR DMID A+LR
Sbjct: 369 FFDEMDSIFRTRGT-GVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 427
Query: 350 PGRLEV 355
PGRL+V
Sbjct: 428 PGRLDV 433
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN 42
+DGVE L N++VIG +NR DMID A+LRPGRL+++++I P+
Sbjct: 400 IDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441
>sp|O50202|ARC_RHOER Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=arc
PE=1 SV=1
Length = 591
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 16/126 (12%)
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEA-------------GPNSGLHIII 290
L +K AE D K +F N K E L + E + G +I+
Sbjct: 292 LAKKIAEARGQDSKDAKSYFLNIKG-PELLNKFVGETERHIRMIFQRAREKASEGTPVIV 350
Query: 291 F-DEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLR 349
F DE+D+I + RG+ G ++ V TVV QLLS++DGVE L N++VIG +NR DMID A+LR
Sbjct: 351 FFDEMDSIFRTRGS-GVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 409
Query: 350 PGRLEV 355
PGRL+V
Sbjct: 410 PGRLDV 415
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN 42
+DGVE L N++VIG +NR DMID A+LRPGRL+++++I P+
Sbjct: 382 IDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 423
>sp|C0ZZV2|ARC_RHOE4 Proteasome-associated ATPase OS=Rhodococcus erythropolis (strain
PR4 / NBRC 100887) GN=arc PE=3 SV=1
Length = 591
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 16/126 (12%)
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEA-------------GPNSGLHIII 290
L +K AE D K +F N K E L + E + G +I+
Sbjct: 292 LAKKIAEARGQDSKDAKSYFLNIKG-PELLNKFVGETERHIRMIFQRAREKASEGTPVIV 350
Query: 291 F-DEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLR 349
F DE+D+I + RG+ G ++ V TVV QLLS++DGVE L N++VIG +NR DMID A+LR
Sbjct: 351 FFDEMDSIFRTRGS-GVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILR 409
Query: 350 PGRLEV 355
PGRL+V
Sbjct: 410 PGRLDV 415
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN 42
+DGVE L N++VIG +NR DMID A+LRPGRL+++++I P+
Sbjct: 382 IDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 423
>sp|A8LH57|ARC_FRASN Proteasome-associated ATPase OS=Frankia sp. (strain EAN1pec) GN=arc
PE=3 SV=1
Length = 601
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE+D+I + RG+ G ++ V +T+V QLLS++DGVE+L N++VIG +NR DMID A+
Sbjct: 358 IVFFDEMDSIFRTRGS-GVSSDVENTIVPQLLSEIDGVEQLENVIVIGASNREDMIDPAI 416
Query: 348 LRPGRLEV 355
LRPGRL+V
Sbjct: 417 LRPGRLDV 424
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 36/42 (85%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN 42
+DGVE+L N++VIG +NR DMID A+LRPGRL++++++ P+
Sbjct: 391 IDGVEQLENVIVIGASNREDMIDPAILRPGRLDVKIKVERPD 432
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,395,696
Number of Sequences: 539616
Number of extensions: 5383670
Number of successful extensions: 15956
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 13981
Number of HSP's gapped (non-prelim): 1331
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)