Your job contains 1 sequence.
>psy3629
MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY
KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR
ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV
SVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIG
FSLLQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKA
RGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLEVSEI
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3629
(358 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0013998 - symbol:Nsf2 "NEM-sensitive fusion protei... 704 9.7e-72 2
FB|FBgn0000346 - symbol:comt "comatose" species:7227 "Dro... 680 6.5e-67 1
ZFIN|ZDB-GENE-030616-37 - symbol:nsfa "N-ethylmaleimide-s... 602 1.3e-61 2
UNIPROTKB|F1RRS3 - symbol:NSF "Uncharacterized protein" s... 598 2.6e-61 2
UNIPROTKB|E2RFV4 - symbol:NSF "Uncharacterized protein" s... 598 2.6e-61 2
UNIPROTKB|F1MZU2 - symbol:NSF "Uncharacterized protein" s... 598 2.6e-61 2
UNIPROTKB|F1P6Z3 - symbol:NSF "Uncharacterized protein" s... 598 2.6e-61 2
MGI|MGI:104560 - symbol:Nsf "N-ethylmaleimide sensitive f... 595 5.4e-61 2
RGD|621594 - symbol:Nsf "N-ethylmaleimide-sensitive facto... 595 5.4e-61 2
UNIPROTKB|F1LQ81 - symbol:Nsf "Vesicle-fusing ATPase" spe... 595 5.4e-61 2
UNIPROTKB|I3L0N3 - symbol:NSF "Vesicle-fusing ATPase" spe... 595 5.4e-61 2
UNIPROTKB|P46459 - symbol:NSF "Vesicle-fusing ATPase" spe... 595 5.4e-61 2
UNIPROTKB|P18708 - symbol:NSF "Vesicle-fusing ATPase" spe... 595 5.4e-61 2
UNIPROTKB|B4DFA2 - symbol:NSF "cDNA FLJ59316, highly simi... 595 5.4e-61 2
UNIPROTKB|E1BQU4 - symbol:NSF "Uncharacterized protein" s... 586 4.8e-60 2
UNIPROTKB|E1C646 - symbol:NSF "Uncharacterized protein" s... 586 4.8e-60 2
UNIPROTKB|E1C649 - symbol:NSF "Uncharacterized protein" s... 586 4.8e-60 2
WB|WBGene00003818 - symbol:nsf-1 species:6239 "Caenorhabd... 612 1.0e-59 1
UNIPROTKB|Q94392 - symbol:nsf-1 "Vesicle-fusing ATPase" s... 612 1.0e-59 1
ZFIN|ZDB-GENE-050808-1 - symbol:nsfb "N-ethylmaleimide-se... 572 1.1e-58 2
UNIPROTKB|I3LTE8 - symbol:I3LTE8 "Uncharacterized protein... 506 4.7e-51 2
POMBASE|SPAC1834.11c - symbol:sec18 "secretory pathway pr... 502 9.5e-50 2
SGD|S000000284 - symbol:SEC18 "ATPase required for vesicu... 466 1.2e-43 1
DICTYBASE|DDB_G0276153 - symbol:nsfA "N-ethylmaleimide-se... 456 1.3e-42 1
UNIPROTKB|G4MRG5 - symbol:MGG_02418 "Vesicular-fusion pro... 454 3.8e-42 1
TAIR|locus:2135378 - symbol:NSF "N-ethylmaleimide sensiti... 444 2.8e-41 1
GENEDB_PFALCIPARUM|PFC0140c - symbol:PFC0140c "N-ethylmal... 432 7.3e-40 1
UNIPROTKB|O77313 - symbol:PFC0140c "N-ethylmaleimide sens... 432 7.3e-40 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 203 6.7e-30 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 224 1.5e-29 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 224 1.5e-29 2
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 207 8.8e-29 2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 203 9.9e-29 2
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 203 9.9e-29 2
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 198 6.0e-28 2
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 194 6.0e-28 2
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 198 7.5e-28 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 198 7.6e-28 2
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 198 7.6e-28 2
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 198 7.6e-28 2
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 198 7.6e-28 2
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 198 7.6e-28 2
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 198 7.6e-28 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 198 7.7e-28 2
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 198 7.7e-28 2
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 198 8.1e-28 2
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 196 1.3e-27 2
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 192 1.5e-27 2
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 196 2.1e-27 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 312 3.0e-27 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 192 3.1e-27 2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 192 3.1e-27 2
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 314 5.1e-27 1
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 312 6.1e-27 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 198 7.0e-27 2
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 312 8.3e-27 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 196 1.9e-26 2
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 307 2.8e-26 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 190 3.7e-26 2
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 186 4.1e-26 2
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 194 5.4e-26 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 192 5.9e-26 2
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 302 9.8e-26 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 187 3.4e-25 2
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 187 3.6e-25 2
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 187 3.6e-25 2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 183 1.1e-24 2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 288 3.1e-24 1
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 182 3.5e-24 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 186 2.9e-23 2
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 192 1.1e-22 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 179 1.2e-22 2
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 234 1.2e-22 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 198 3.9e-22 2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 173 5.1e-22 2
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 173 5.2e-22 2
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 174 8.0e-22 2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 174 8.0e-22 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 185 2.8e-21 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 175 4.0e-21 2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 164 7.1e-21 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 164 7.1e-21 2
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 167 1.0e-20 2
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 167 1.0e-20 2
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 193 1.4e-20 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 193 1.4e-20 2
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 177 3.2e-20 2
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 180 4.3e-20 2
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 162 1.0e-19 2
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 255 1.1e-19 1
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 160 2.2e-19 2
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 163 3.6e-19 2
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 206 5.5e-18 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 222 1.2e-17 2
UNIPROTKB|F1SN45 - symbol:SPATA5L1 "Uncharacterized prote... 164 2.5e-16 3
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 154 8.2e-16 3
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 218 1.5e-15 1
UNIPROTKB|Q9BVQ7 - symbol:SPATA5L1 "Spermatogenesis-assoc... 157 1.7e-15 3
RGD|1595990 - symbol:Spata5l1 "spermatogenesis associated... 162 1.8e-15 3
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 192 3.3e-15 2
WARNING: Descriptions of 414 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0013998 [details] [associations]
symbol:Nsf2 "NEM-sensitive fusion protein 2" species:7227
"Drosophila melanogaster" [GO:0005737 "cytoplasm" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0016082
"synaptic vesicle priming" evidence=NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS;NAS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0015031 GO:GO:0007274
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0008582 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OrthoDB:EOG4RFJ7K
EMBL:U30502 EMBL:BT023784 EMBL:U28836 RefSeq:NP_788676.1
UniGene:Dm.6688 ProteinModelPortal:P54351 SMR:P54351
MINT:MINT-1669916 STRING:P54351 PaxDb:P54351 PRIDE:P54351
EnsemblMetazoa:FBtr0082883 GeneID:41694 KEGG:dme:Dmel_CG33101
CTD:41694 FlyBase:FBgn0013998 InParanoid:P54351 OMA:IFTLRTH
PhylomeDB:P54351 GenomeRNAi:41694 NextBio:825088 Bgee:P54351
GermOnline:CG33101 Uniprot:P54351
Length = 752
Score = 704 (252.9 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 139/185 (75%), Positives = 161/185 (87%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNRRDMIDEALLRPGRLE+QMEISLPNE GRVQIL IHT +MR +
Sbjct: 363 IDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDF 422
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K+A DV+ E+AA TKNFSGAELEGLVRAAQS AMNRLIKA +KV VDP+A+EKL +TR
Sbjct: 423 NKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKLRVTR 482
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
ADFLHAL+ DIKPAFG++ E LE+ L+RGI+NWG PV E LE G + +QQ+K TESSGLV
Sbjct: 483 ADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTELLEDGMLSVQQAKATESSGLV 542
Query: 181 SVLLE 185
SVL+E
Sbjct: 543 SVLIE 547
Score = 354 (129.7 bits), Expect = 5.7e-53, Sum P(2) = 5.7e-53
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
GPNSGLHIIIFDEIDAICKARG+ GN+GVHDTVVNQLL+K+DGVE+LNNILVIGMTNRR
Sbjct: 322 GPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRR 381
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 382 DMIDEALLRPGRLEV 396
Score = 229 (85.7 bits), Expect = 5.7e-53, Sum P(2) = 5.7e-53
Identities = 42/80 (52%), Positives = 59/80 (73%)
Query: 188 KVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAY--SPDVKRGFIGFSLLQ 245
K PTDELSL+N A N DF E+ K+++++ GPG HYIF L P++ G +GFSL+Q
Sbjct: 13 KCPTDELSLTNKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSLVQ 72
Query: 246 RKWAELSLHQDIDVKPFFFN 265
RKWA LS++Q+IDV+P+ F+
Sbjct: 73 RKWATLSINQEIDVRPYRFD 92
Score = 40 (19.1 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 270 SEFLCTIILEAGPNSG 285
S L ++++E PNSG
Sbjct: 538 SSGLVSVLIEGAPNSG 553
Score = 37 (18.1 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L I+ D ++ + G N + +V LL K R +L++
Sbjct: 593 IFDDAYRSTLSCIVVDNVERLLDYGPIGPRYSNLTLQALLV--LLKKQPPKGR--KLLIL 648
Query: 335 GMTNRRDMIDE 345
++RRD+++E
Sbjct: 649 CTSSRRDVLEE 659
>FB|FBgn0000346 [details] [associations]
symbol:comt "comatose" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=ISS;NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016082 "synaptic
vesicle priming" evidence=NAS] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0048172 "regulation of
short-term neuronal synaptic plasticity" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0006911
GO:GO:0046872 GO:GO:0015031 EMBL:AE014298 GO:GO:0016887
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0007030 GO:GO:0048172 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 CTD:1312 EMBL:U09373
EMBL:BT010259 RefSeq:NP_524877.1 UniGene:Dm.1772
ProteinModelPortal:P46461 SMR:P46461 DIP:DIP-20666N IntAct:P46461
MINT:MINT-288692 STRING:P46461 PaxDb:P46461 PRIDE:P46461
EnsemblMetazoa:FBtr0073754 EnsemblMetazoa:FBtr0333329 GeneID:47091
KEGG:dme:Dmel_CG1618 FlyBase:FBgn0000346
GeneTree:ENSGT00530000064085 InParanoid:P46461 KO:K06027
OMA:HFIFALE OrthoDB:EOG4RFJ7K PhylomeDB:P46461 GenomeRNAi:47091
NextBio:838904 Bgee:P46461 GermOnline:CG1618 Uniprot:P46461
Length = 745
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 133/184 (72%), Positives = 158/184 (85%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGV++LNNILVIGMTNRRDMIDEALLRPGRLE+QMEISLPNE GRVQIL IHT +MR +
Sbjct: 358 IDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREF 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K+ DDV+ KE+AALTKNFSGAELEGLVRAAQS AMNRLIKA KV VDP+A+EKL + R
Sbjct: 418 NKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKVTVDPEAMEKLKVNR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFLH+LE DIKPAFG++ E L++ L+RG++NWG PV LE G +++QQ+K ESSGLV
Sbjct: 478 DDFLHSLEHDIKPAFGTAQEILDNMLARGVINWGAPVSNLLEDGMLYVQQAKAPESSGLV 537
Query: 181 SVLL 184
SVL+
Sbjct: 538 SVLV 541
Score = 346 (126.9 bits), Expect = 2.2e-51, Sum P(2) = 2.2e-51
Identities = 66/75 (88%), Positives = 72/75 (96%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
GPNSGLHIIIFDEIDAICK RG+ GN+GVHDTVVNQLL+K+DGV++LNNILVIGMTNRR
Sbjct: 317 GPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRR 376
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 377 DMIDEALLRPGRLEV 391
Score = 222 (83.2 bits), Expect = 2.2e-51, Sum P(2) = 2.2e-51
Identities = 38/86 (44%), Positives = 64/86 (74%)
Query: 180 VSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFI 239
++ +L+ K PTDELSL+N A N DF E+ K+ +++ PG+H+IF L + +V G++
Sbjct: 1 MAYILKATKCPTDELSLTNRAIVNVGDFPEEIKYADISPAPGQHFIFALEKTVEVPSGYV 60
Query: 240 GFSLLQRKWAELSLHQDIDVKPFFFN 265
GFSL+QRKWA +S++Q+++V+P+ F+
Sbjct: 61 GFSLVQRKWAMVSINQELEVRPYRFD 86
>ZFIN|ZDB-GENE-030616-37 [details] [associations]
symbol:nsfa "N-ethylmaleimide-sensitive factor a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0014037 "Schwann
cell differentiation" evidence=IMP] [GO:0048932 "myelination of
posterior lateral line nerve axons" evidence=IMP] [GO:0048929
"efferent axon development in posterior lateral line nerve"
evidence=IMP] [GO:0048933 "afferent axon development in posterior
lateral line nerve" evidence=IMP] [GO:0014044 "Schwann cell
development" evidence=IMP] [GO:0048914 "myelination of anterior
lateral line nerve axons" evidence=IMP] [GO:0048592 "eye
morphogenesis" evidence=IMP] [GO:0048794 "swim bladder development"
evidence=IMP] [GO:0051875 "pigment granule localization"
evidence=IMP] [GO:0045162 "clustering of voltage-gated sodium
channels" evidence=IMP] [GO:0021854 "hypothalamus development"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-030616-37
GO:GO:0005524 GO:GO:0017111 GO:GO:0045162 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0014044 GO:GO:0021854
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0048592 HOVERGEN:HBG000324 HSSP:P18708 GO:GO:0048794
GO:GO:0048929 GO:GO:0048932 GO:GO:0048914 EMBL:BC050490
IPI:IPI00611897 UniGene:Dr.9155 ProteinModelPortal:Q7ZU50
SMR:Q7ZU50 STRING:Q7ZU50 PRIDE:Q7ZU50 ArrayExpress:Q7ZU50
Bgee:Q7ZU50 GO:GO:0048933 GO:GO:0051875 Uniprot:Q7ZU50
Length = 744
Score = 602 (217.0 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 119/185 (64%), Positives = 147/185 (79%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEAL+RPGR E++MEI LP+E GRVQIL IHTAKMR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALMRPGRFEVKMEIGLPDEKGRVQILNIHTAKMREF 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K LA DV++KELAA TKN+SGAELEGLVRAAQS MNR IKAT+ VEVD + EKL +TR
Sbjct: 418 KLLASDVDVKELAAETKNYSGAELEGLVRAAQSTVMNRHIKATSTVEVDMERAEKLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF+ +L DIKPAFG++ E ++ GI+ WG PV LE G + +QQ+K+++ + LV
Sbjct: 478 TDFMASLNNDIKPAFGTNQEDYSSYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 323 (118.8 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 62/75 (82%), Positives = 68/75 (90%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDE+DAICK RGT +TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDELDAICKQRGTGASSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEAL+RPGR EV
Sbjct: 377 DLIDEALMRPGRFEV 391
Score = 147 (56.8 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A ++ D ++ +H+ V T ++FT+ V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCAVVSEKD-LQSGQHVTVRTTTTHKFVFTVKGHHSVLPGTIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVSNYNFD 86
Score = 46 (21.3 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKTPPHGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|F1RRS3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:CU928092 Ensembl:ENSSSCT00000018852 Uniprot:F1RRS3
Length = 752
Score = 598 (215.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 119/185 (64%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV LE G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 332 (121.9 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 187 (70.9 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVNEKDF-QSGQHVVVRTSPNHRYTFTLRTHPSVVPGSIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVSSYTFD 86
Score = 47 (21.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|E2RFV4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AAEX03006344 Ensembl:ENSCAFT00000021411
Uniprot:E2RFV4
Length = 811
Score = 598 (215.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 119/185 (64%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 417 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 476
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 477 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 536
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV LE G + +QQ+K+++ + LV
Sbjct: 537 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLV 596
Query: 181 SVLLE 185
SVLLE
Sbjct: 597 SVLLE 601
Score = 332 (121.9 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 376 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 435
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 436 DLIDEALLRPGRLEV 450
Score = 183 (69.5 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 40/95 (42%), Positives = 56/95 (58%)
Query: 171 SKDTESSGLVSVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAY 230
+K S+ + ++ + PTDELSL+N A N+ DF + +H+ V T P Y FTL
Sbjct: 52 AKPDVSAKMAGRTMQAARCPTDELSLTNCAVVNEKDF-QPGQHVIVRTSPNHRYTFTLRT 110
Query: 231 SPDVKRGFIGFSLLQRKWAELSLHQDIDVKPFFFN 265
P V G I FSL QRKWA LS+ Q+I+V + F+
Sbjct: 111 HPSVVPGSIAFSLPQRKWAGLSIGQEIEVSLYTFD 145
Score = 47 (21.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 647 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 702
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 703 GTTSRKDVLQE 713
>UNIPROTKB|F1MZU2 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0019905 "syntaxin binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:DAAA02049275 EMBL:DAAA02049276 IPI:IPI00721227
Ensembl:ENSBTAT00000011107 Uniprot:F1MZU2
Length = 746
Score = 598 (215.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 119/185 (64%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV LE G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 332 (121.9 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 181 (68.8 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCAVVNEKDF-QSGQHVIVRTSPNHRYTFTLRTHPSVVPGSIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVSLYTFD 86
Score = 47 (21.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|F1P6Z3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0019905
"syntaxin binding" evidence=IEA] [GO:0006813 "potassium ion
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006813 GO:GO:0001921
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 EMBL:AAEX03006344
Ensembl:ENSCAFT00000021409 Uniprot:F1P6Z3
Length = 745
Score = 598 (215.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 119/185 (64%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 359 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 418
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 419 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 478
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV LE G + +QQ+K+++ + LV
Sbjct: 479 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLV 538
Query: 181 SVLLE 185
SVLLE
Sbjct: 539 SVLLE 543
Score = 332 (121.9 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 318 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 377
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 378 DLIDEALLRPGRLEV 392
Score = 180 (68.4 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 7 MQAARCPTDELSLTNCAVVNEKDF-QPGQHVIVRTSPNHRYTFTLRTHPSVVPGSIAFSL 65
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 66 PQRKWAGLSIGQEIEVSLYTFD 87
Score = 47 (21.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 589 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 644
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 645 GTTSRKDVLQE 655
>MGI|MGI:104560 [details] [associations]
symbol:Nsf "N-ethylmaleimide sensitive fusion protein"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0015031 "protein
transport" evidence=ISO] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=ISO] [GO:0017157 "regulation of
exocytosis" evidence=ISO] [GO:0019905 "syntaxin binding"
evidence=IDA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0043008 "ATP-dependent
protein binding" evidence=ISO] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
MGI:MGI:104560 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524
GO:GO:0016192 GO:GO:0046872 GO:GO:0015031 GO:GO:0043198
GO:GO:0005795 GO:GO:0019905 GO:GO:0006813 eggNOG:COG0464
GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 GeneTree:ENSGT00530000064085 KO:K06027
OMA:IFTLRTH HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR
ChiTaRS:NSF EMBL:U10120 EMBL:AK028415 EMBL:AK032120 EMBL:AK049281
EMBL:AK051430 EMBL:AK085086 EMBL:AK153905 EMBL:AL596108
EMBL:AL603829 EMBL:BC006627 EMBL:BC019167 IPI:IPI00656325
RefSeq:NP_032766.2 UniGene:Mm.260117 UniGene:Mm.474887
ProteinModelPortal:P46460 SMR:P46460 IntAct:P46460 MINT:MINT-89339
STRING:P46460 PhosphoSite:P46460 REPRODUCTION-2DPAGE:P46460
PaxDb:P46460 PRIDE:P46460 Ensembl:ENSMUST00000103075 GeneID:18195
KEGG:mmu:18195 UCSC:uc007lvt.1 InParanoid:P46460 NextBio:293548
Bgee:P46460 CleanEx:MM_NSF Genevestigator:P46460
GermOnline:ENSMUSG00000034187 Uniprot:P46460
Length = 744
Score = 595 (214.5 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 332 (121.9 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 192 (72.6 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 41/82 (50%), Positives = 52/82 (63%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A N+ DF + +H+ V T P YIFTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVNEKDF-QSGQHVMVRTSPNHKYIFTLRTHPSVVPGCIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ QDI+V + F+
Sbjct: 65 PQRKWAGLSIGQDIEVALYSFD 86
Score = 47 (21.6 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>RGD|621594 [details] [associations]
symbol:Nsf "N-ethylmaleimide-sensitive factor" species:10116
"Rattus norvegicus" [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006813 "potassium ion
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=TAS]
[GO:0006944 "cellular membrane fusion" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0014069 "postsynaptic
density" evidence=IDA;TAS] [GO:0015031 "protein transport"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA;TAS]
[GO:0017137 "Rab GTPase binding" evidence=IDA] [GO:0017157
"regulation of exocytosis" evidence=IMP] [GO:0019905 "syntaxin
binding" evidence=ISO] [GO:0030165 "PDZ domain binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0043008
"ATP-dependent protein binding" evidence=IPI] [GO:0043198
"dendritic shaft" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 RGD:621594 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0014069 GO:GO:0046872 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0016887 GO:GO:0006813
eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0017137 GO:GO:0007269 GO:GO:0042623
GO:GO:0006906 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 KO:K06027 HOGENOM:HOG000198544
HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR EMBL:AF142097
EMBL:AF189019 IPI:IPI00210635 RefSeq:NP_068516.1 UniGene:Rn.13345
HSSP:P18708 ProteinModelPortal:Q9QUL6 SMR:Q9QUL6 IntAct:Q9QUL6
STRING:Q9QUL6 PhosphoSite:Q9QUL6 World-2DPAGE:0004:Q9QUL6
PRIDE:Q9QUL6 GeneID:60355 KEGG:rno:60355 UCSC:RGD:621594
InParanoid:Q9QUL6 NextBio:612027 ArrayExpress:Q9QUL6
Genevestigator:Q9QUL6 GermOnline:ENSRNOG00000003905 Uniprot:Q9QUL6
Length = 744
Score = 595 (214.5 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 332 (121.9 bits), Expect = 2.2e-46, Sum P(2) = 2.2e-46
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 189 (71.6 bits), Expect = 2.2e-46, Sum P(2) = 2.2e-46
Identities = 40/82 (48%), Positives = 52/82 (63%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A N+ D+ + +H+ V T P YIFTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVNEKDY-QSGQHVMVRTSPNHKYIFTLRTHPSVVPGCIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ QDI+V + F+
Sbjct: 65 PQRKWAGLSIGQDIEVALYSFD 86
Score = 47 (21.6 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|F1LQ81 [details] [associations]
symbol:Nsf "Vesicle-fusing ATPase" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:621594 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
IPI:IPI00210635 PRIDE:F1LQ81 Ensembl:ENSRNOT00000006361
ArrayExpress:F1LQ81 Uniprot:F1LQ81
Length = 744
Score = 595 (214.5 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 332 (121.9 bits), Expect = 2.2e-46, Sum P(2) = 2.2e-46
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 189 (71.6 bits), Expect = 2.2e-46, Sum P(2) = 2.2e-46
Identities = 40/82 (48%), Positives = 52/82 (63%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A N+ D+ + +H+ V T P YIFTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVNEKDY-QSGQHVMVRTSPNHKYIFTLRTHPSVVPGCIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ QDI+V + F+
Sbjct: 65 PQRKWAGLSIGQDIEVALYSFD 86
Score = 47 (21.6 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|I3L0N3 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016192
GO:GO:0015031 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0017157 EMBL:AC138645 EMBL:AC217780 HGNC:HGNC:8016
ChiTaRS:NSF ProteinModelPortal:I3L0N3 SMR:I3L0N3 PRIDE:I3L0N3
Ensembl:ENST00000575068 Bgee:I3L0N3 Uniprot:I3L0N3
Length = 739
Score = 595 (214.5 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 353 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 412
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 413 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 472
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 473 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 532
Query: 181 SVLLE 185
SVLLE
Sbjct: 533 SVLLE 537
Score = 332 (121.9 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 312 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 371
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 372 DLIDEALLRPGRLEV 386
Score = 181 (68.8 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 1 MQAARCPTDELSLTNCAVVNEKDF-QSGQHVIVRTSPNHRYTFTLKTHPSVVPGSIAFSL 59
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 60 PQRKWAGLSIGQEIEVSLYTFD 81
Score = 47 (21.6 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 583 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 638
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 639 GTTSRKDVLQE 649
>UNIPROTKB|P46459 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0006887 "exocytosis" evidence=TAS] [GO:0045026 "plasma membrane
fusion" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0001921
"positive regulation of receptor recycling" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_13685 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0032403 GO:GO:0046872 GO:GO:0015031
GO:GO:0007268 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
GO:GO:0006887 eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 GO:GO:0017157
GO:GO:0045026 EMBL:AC138645 KO:K06027 OMA:IFTLRTH
HOGENOM:HOG000198544 HOVERGEN:HBG000324 EMBL:U03985 EMBL:AF135168
EMBL:AF102846 EMBL:AK290204 EMBL:AC004098 EMBL:AC138688
EMBL:AC217769 EMBL:AC217778 EMBL:AC217780 EMBL:BC030613
IPI:IPI00006451 PIR:G01234 RefSeq:NP_006169.2 UniGene:Hs.431279
ProteinModelPortal:P46459 SMR:P46459 DIP:DIP-389N IntAct:P46459
MINT:MINT-1369243 STRING:P46459 TCDB:1.F.1.1.1 PhosphoSite:P46459
DMDM:257051048 UCD-2DPAGE:P46459 PaxDb:P46459 PRIDE:P46459
Ensembl:ENST00000398238 GeneID:4905 KEGG:hsa:4905 UCSC:uc002iku.3
CTD:4905 GeneCards:GC17P044668 H-InvDB:HIX0013914
H-InvDB:HIX0013915 HGNC:HGNC:8016 HPA:CAB009324 HPA:CAB013645
HPA:HPA003154 MIM:601633 neXtProt:NX_P46459 PharmGKB:PA31793
InParanoid:P46459 OrthoDB:EOG4DZ1TR PhylomeDB:P46459 ChiTaRS:NSF
GenomeRNAi:4905 NextBio:18875 PMAP-CutDB:P46459 ArrayExpress:P46459
Bgee:P46459 CleanEx:HS_NSF Genevestigator:P46459
GermOnline:ENSG00000073969 Uniprot:P46459
Length = 744
Score = 595 (214.5 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 332 (121.9 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 181 (68.8 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCAVVNEKDF-QSGQHVIVRTSPNHRYTFTLKTHPSVVPGSIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVSLYTFD 86
Score = 47 (21.6 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|P18708 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:10029
"Cricetulus griseus" [GO:0030496 "midbody" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0015031 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0030496 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 EMBL:X15652 PIR:S04235 PDB:1D2N
PDB:1NSF PDB:1QCS PDB:1QDN PDBsum:1D2N PDBsum:1NSF PDBsum:1QCS
PDBsum:1QDN ProteinModelPortal:P18708 SMR:P18708 DIP:DIP-35598N
IntAct:P18708 PRIDE:P18708 HOVERGEN:HBG000324
EvolutionaryTrace:P18708 Uniprot:P18708
Length = 744
Score = 595 (214.5 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 332 (121.9 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 178 (67.7 bits), Expect = 3.1e-45, Sum P(2) = 3.1e-45
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A ++ D+ + +H+ V T P YIFTL P V G + FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVSEKDY-QSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVALYSFD 86
Score = 47 (21.6 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|B4DFA2 [details] [associations]
symbol:NSF "cDNA FLJ59316, highly similar to Vesicle-fusing
ATPase (EC 3.6.4.6)" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006813 "potassium ion transport"
evidence=IEA] [GO:0019905 "syntaxin binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016192 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0006813 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 GO:GO:0017157
EMBL:AC138645 HOVERGEN:HBG000324 EMBL:AC217780 UniGene:Hs.431279
HGNC:HGNC:8016 ChiTaRS:NSF EMBL:AK294001 IPI:IPI00985110 SMR:B4DFA2
STRING:B4DFA2 Ensembl:ENST00000225282 Uniprot:B4DFA2
Length = 644
Score = 595 (214.5 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 118/185 (63%), Positives = 148/185 (80%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 264 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 323
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 324 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTR 383
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 384 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 443
Query: 181 SVLLE 185
SVLLE
Sbjct: 444 SVLLE 448
Score = 332 (121.9 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 223 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 282
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 283 DLIDEALLRPGRLEV 297
Score = 47 (21.6 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 494 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 549
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 550 GTTSRKDVLQE 560
>UNIPROTKB|E1BQU4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00589241
Ensembl:ENSGALT00000001581 ArrayExpress:E1BQU4 Uniprot:E1BQU4
Length = 745
Score = 586 (211.3 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 116/185 (62%), Positives = 145/185 (78%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR QIL IHT +MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ LA+DV++ ELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLRVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 329 (120.9 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSG+HIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 188 (71.2 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 42/96 (43%), Positives = 57/96 (59%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N DF +H+ V T P YIFTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCAVVNDTDFPSG-QHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILE 279
QRKWA LS+ Q+IDV + F+ + + + T+ +E
Sbjct: 65 PQRKWAGLSIGQEIDVSLYTFD--KSKQCIATMTIE 98
Score = 47 (21.6 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|E1C646 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00821151
Ensembl:ENSGALT00000040844 ArrayExpress:E1C646 Uniprot:E1C646
Length = 744
Score = 586 (211.3 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 116/185 (62%), Positives = 145/185 (78%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR QIL IHT +MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ LA+DV++ ELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLRVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 329 (120.9 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSG+HIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 188 (71.2 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 42/96 (43%), Positives = 57/96 (59%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N DF +H+ V T P YIFTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCAVVNDTDFPSG-QHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILE 279
QRKWA LS+ Q+IDV + F+ + + + T+ +E
Sbjct: 65 PQRKWAGLSIGQEIDVSLYTFD--KSKQCIATMTIE 98
Score = 47 (21.6 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|E1C649 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0030165 "PDZ
domain binding" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00823263
Ensembl:ENSGALT00000040841 ArrayExpress:E1C649 Uniprot:E1C649
Length = 747
Score = 586 (211.3 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 116/185 (62%), Positives = 145/185 (78%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR QIL IHT +MR +
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREH 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ LA+DV++ ELA TKNFSGAELEGLVRAAQS AMNR IKA+ KVEVD + E L +TR
Sbjct: 418 QLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLRVTR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF +LE DIKPAFG++ E ++ GI+ WG PV L+ G + +QQ+K+++ + LV
Sbjct: 478 GDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 537
Query: 181 SVLLE 185
SVLLE
Sbjct: 538 SVLLE 542
Score = 329 (120.9 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 64/75 (85%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSG+HIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 188 (71.2 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 42/96 (43%), Positives = 57/96 (59%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N DF +H+ V T P YIFTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCAVVNDTDFPSG-QHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILE 279
QRKWA LS+ Q+IDV + F+ + + + T+ +E
Sbjct: 65 PQRKWAGLSIGQEIDVSLYTFD--KSKQCIATMTIE 98
Score = 47 (21.6 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 588 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>WB|WBGene00003818 [details] [associations]
symbol:nsf-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0071688 "striated muscle
myosin thick filament assembly" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 GO:GO:0032940 GO:GO:0046872
GO:GO:0015031 GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 127/210 (60%), Positives = 158/210 (75%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGVE+LNNILVIGMTNRRDMIDEALLRPGRLE+QME+SLP+E GR+QIL+IHTA+MR Y
Sbjct: 435 MDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREY 494
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K+ +V+L++++ TKNFSGAELEGLVRAAQS AMNRL+KA K + DP A+EKL I
Sbjct: 495 NKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKLAINS 554
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF +ALE DIKPAFG SDESL FLSRG++ WG V + L+ G + K+ E+SG
Sbjct: 555 GDFDYALENDIKPAFGRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFR 614
Query: 181 SVLLEVDKVPTDELSLSNFAAANKD-DFVE 209
+V+L T + SL+ A + D FV+
Sbjct: 615 TVVL-AGAAKTGKTSLAAQMAKSSDFPFVK 643
Score = 336 (123.3 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 66/75 (88%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G++ VHDTVVNQLLSKMDGVE+LNNILVIGMTNRR
Sbjct: 394 GANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRR 453
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 454 DMIDEALLRPGRLEV 468
Score = 193 (73.0 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 41/103 (39%), Positives = 61/103 (59%)
Query: 183 LLEVDKVPTDELSLSNFAAANKDDFVE-DTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGF 241
+ V K P++E +L+N+A N+ DF + KH+ V GP HYIF++ +K G I F
Sbjct: 67 MFRVRKAPSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAF 126
Query: 242 SLLQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEAGPNS 284
+ RKWA LSL Q++ V PF F SE++ ++IL A N+
Sbjct: 127 GVPHRKWAALSLDQEVRVTPFTFQQ---SEYVGSMILTADFNA 166
>UNIPROTKB|Q94392 [details] [associations]
symbol:nsf-1 "Vesicle-fusing ATPase" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0009792
GO:GO:0006898 GO:GO:0005737 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0032940 GO:GO:0046872 GO:GO:0015031
GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 127/210 (60%), Positives = 158/210 (75%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGVE+LNNILVIGMTNRRDMIDEALLRPGRLE+QME+SLP+E GR+QIL+IHTA+MR Y
Sbjct: 435 MDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREY 494
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K+ +V+L++++ TKNFSGAELEGLVRAAQS AMNRL+KA K + DP A+EKL I
Sbjct: 495 NKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKLAINS 554
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF +ALE DIKPAFG SDESL FLSRG++ WG V + L+ G + K+ E+SG
Sbjct: 555 GDFDYALENDIKPAFGRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFR 614
Query: 181 SVLLEVDKVPTDELSLSNFAAANKD-DFVE 209
+V+L T + SL+ A + D FV+
Sbjct: 615 TVVL-AGAAKTGKTSLAAQMAKSSDFPFVK 643
Score = 336 (123.3 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 66/75 (88%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G++ VHDTVVNQLLSKMDGVE+LNNILVIGMTNRR
Sbjct: 394 GANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRR 453
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 454 DMIDEALLRPGRLEV 468
Score = 193 (73.0 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 41/103 (39%), Positives = 61/103 (59%)
Query: 183 LLEVDKVPTDELSLSNFAAANKDDFVE-DTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGF 241
+ V K P++E +L+N+A N+ DF + KH+ V GP HYIF++ +K G I F
Sbjct: 67 MFRVRKAPSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAF 126
Query: 242 SLLQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEAGPNS 284
+ RKWA LSL Q++ V PF F SE++ ++IL A N+
Sbjct: 127 GVPHRKWAALSLDQEVRVTPFTFQQ---SEYVGSMILTADFNA 166
>ZFIN|ZDB-GENE-050808-1 [details] [associations]
symbol:nsfb "N-ethylmaleimide-sensitive factor b"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-050808-1 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
KO:K06027 HOVERGEN:HBG000324 EMBL:DQ022212 IPI:IPI00862410
RefSeq:NP_001019625.1 UniGene:Dr.94035 ProteinModelPortal:Q4U0S6
SMR:Q4U0S6 GeneID:554200 KEGG:dre:554200 CTD:554200
NextBio:20880726 Uniprot:Q4U0S6
Length = 747
Score = 572 (206.4 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 115/185 (62%), Positives = 144/185 (77%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GRVQIL IHTAKM+
Sbjct: 358 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDETGRVQILNIHTAKMKQS 417
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
LA DV++KELA TKN+SGAELEGLVRAAQS AMNR IKAT +VEVD + + L ++R
Sbjct: 418 NMLAKDVDVKELAVETKNYSGAELEGLVRAAQSTAMNRHIKATTQVEVDTEKAQTLQVSR 477
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
+DFL +L DIKPAFGS+ E ++ GI+ W V + L G + +QQ+K++E + LV
Sbjct: 478 SDFLASLNNDIKPAFGSNQEDYSSYIMNGIVKWSNAVSDILGDGELLVQQTKNSERTPLV 537
Query: 181 SVLLE 185
+VLLE
Sbjct: 538 TVLLE 542
Score = 332 (121.9 bits), Expect = 3.6e-46, Sum P(2) = 3.6e-46
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 317 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 376
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 377 DLIDEALLRPGRLEV 391
Score = 187 (70.9 bits), Expect = 3.6e-46, Sum P(2) = 3.6e-46
Identities = 38/96 (39%), Positives = 62/96 (64%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A++ DF + +H+ + T P + ++FT+ P V G I FSL
Sbjct: 6 MQAARCPTDELSLTNCVVASEKDF-KSGQHLTIKTTPTQKFVFTVRTHPSVVPGTIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILE 279
QRKWA LSL+QD++V + F+P +++ T+ +E
Sbjct: 65 PQRKWAGLSLNQDVEVSVYNFDPSR--QYVGTMTIE 98
Score = 48 (22.0 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I E S L ++ D+I+ + G N + +V LL K R +L++
Sbjct: 588 IFEDAYKSQLSCVVVDDIERLLDFVPIGPRFSNLVLQALLV--LLKKPP--PRGRKLLIL 643
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 644 GTTSRKDVLQE 654
>UNIPROTKB|I3LTE8 [details] [associations]
symbol:I3LTE8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
Ensembl:ENSSSCT00000026497 OMA:QEMEMLT Uniprot:I3LTE8
Length = 751
Score = 506 (183.2 bits), Expect = 4.7e-51, Sum P(2) = 4.7e-51
Identities = 106/185 (57%), Positives = 136/185 (73%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE+LNNILVIGMTNR D+IDEALLRPGRLE++MEI LP+E GR+QIL IHTA+MR +
Sbjct: 357 IDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGH 416
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ L+ DV++KELA TKNFSGAELEGLVRAAQS AMNR IK V ++L+ + I
Sbjct: 417 QLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKEPPYVTQHFESLQCVKIKY 476
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
+ L IK AFG++ E ++ GI+ WG PV LE G + +QQ+K+++ + LV
Sbjct: 477 GIYSKGLGDKIKKAFGTNQEDYASYIMNGIIKWGDPVTRVLEDGELLVQQTKNSDRTPLV 536
Query: 181 SVLLE 185
SVLLE
Sbjct: 537 SVLLE 541
Score = 332 (121.9 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 65/75 (86%), Positives = 70/75 (93%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G NSGLHIIIFDEIDAICK RG+ G+TGVHDTVVNQLLSK+DGVE+LNNILVIGMTNR
Sbjct: 316 GANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRP 375
Query: 341 DMIDEALLRPGRLEV 355
D+IDEALLRPGRLEV
Sbjct: 376 DLIDEALLRPGRLEV 390
Score = 187 (70.9 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSLSN A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 6 MQAARCPTDELSLSNCAVVNEKDF-QSGQHVVVRTSPNHRYTFTLRTHPSVVPGSIAFSL 64
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 65 PQRKWAGLSIGQEIEVSSYTFD 86
Score = 47 (21.6 bits), Expect = 4.7e-51, Sum P(2) = 4.7e-51
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S L ++ D+I+ + G N + +V LL K R +L+I
Sbjct: 587 IFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV--LLKKAPPQGR--KLLII 642
Query: 335 GMTNRRDMIDE 345
G T+R+D++ E
Sbjct: 643 GTTSRKDVLQE 653
>POMBASE|SPAC1834.11c [details] [associations]
symbol:sec18 "secretory pathway protein Sec18
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 PomBase:SPAC1834.11c Pfam:PF02359 GO:GO:0005524
GO:GO:0005737 GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 eggNOG:COG0464 GO:GO:0006888 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 PIR:T50122 RefSeq:NP_594690.1
ProteinModelPortal:Q9P7Q4 STRING:Q9P7Q4 EnsemblFungi:SPAC1834.11c.1
GeneID:2542410 KEGG:spo:SPAC1834.11c OrthoDB:EOG4PVS6W
NextBio:20803469 Uniprot:Q9P7Q4
Length = 792
Score = 502 (181.8 bits), Expect = 9.5e-50, Sum P(2) = 9.5e-50
Identities = 103/184 (55%), Positives = 142/184 (77%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV++LNNILVIGMTNR+DMIDEALLRPGRLE+ MEISLP+E GR+QIL+IHT++M S
Sbjct: 409 MDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASN 468
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
L +DV+++ELA+LTKNFSGAE+ GL+++A S A R IK V LE + + R
Sbjct: 469 GILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGN-LENIKVNR 527
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFL+AL ++++PA+G S+E LE + GI+N+G ++E + G++F+QQ K++E + LV
Sbjct: 528 NDFLNAL-SEVRPAYGVSEEELESRVQGGIINFGKHIEEIITEGKLFVQQVKNSERTRLV 586
Query: 181 SVLL 184
SVLL
Sbjct: 587 SVLL 590
Score = 322 (118.4 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 62/77 (80%), Positives = 71/77 (92%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
+ G SGLHIIIFDE+DAICK RG++GG+TGV D VVNQLL+KMDGV++LNNILVIGMTN
Sbjct: 366 DRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTN 425
Query: 339 RRDMIDEALLRPGRLEV 355
R+DMIDEALLRPGRLEV
Sbjct: 426 RKDMIDEALLRPGRLEV 442
Score = 60 (26.2 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 188 KVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSLLQRK 247
K + E +L+N + DF + ++I V +F+ P +G +G S R+
Sbjct: 65 KATSTEDALTNCIIVSPMDFKQ--QYIIVDNSR----VFSTKPVPGFPQGCLGASQPHRE 118
Query: 248 WAELSLHQDIDVKPFF-FNPKNTSEFLCTIILE 279
WA SL+Q + V + + P + +L ++ LE
Sbjct: 119 WASWSLNQQVHVADYDPYGPHG-APYLHSMTLE 150
Score = 43 (20.2 bits), Expect = 9.5e-50, Sum P(2) = 9.5e-50
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICK--ARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
+ E S L +I+ DEI+ I G NT + +V L K + + +L++
Sbjct: 637 VFEDSYKSPLSVIVVDEIERIIDWVPIGPRFSNTLLQTLMV--LFKKQP--PKGHRLLIL 692
Query: 335 GMTNRRDMI 343
T+ R M+
Sbjct: 693 ATTSERTML 701
>SGD|S000000284 [details] [associations]
symbol:SEC18 "ATPase required for vesicular transport between
ER and Golgi" species:4932 "Saccharomyces cerevisiae" [GO:0048280
"vesicle fusion with Golgi apparatus" evidence=IDA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IDA] [GO:0048219
"inter-Golgi cisterna vesicle-mediated transport" evidence=IMP]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=IMP] [GO:0048211 "Golgi vesicle docking" evidence=IDA]
[GO:0035494 "SNARE complex disassembly" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0043332 "mating projection tip"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0000045 "autophagic
vacuole assembly" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000000284 Pfam:PF02359
GO:GO:0005524 GO:GO:0005737 GO:GO:0043332 GO:GO:0000045
EMBL:BK006936 GO:GO:0016887 KO:K09448 eggNOG:COG0464
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 EMBL:X76294
GO:GO:0043001 GO:GO:0048280 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 EMBL:AF004912
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 GO:GO:0048219 GO:GO:0035494 OrthoDB:EOG4PVS6W
EMBL:M20662 EMBL:Z35949 PIR:S45477 RefSeq:NP_009636.3
RefSeq:NP_009639.3 PDB:1CR5 PDBsum:1CR5 ProteinModelPortal:P18759
SMR:P18759 DIP:DIP-2497N IntAct:P18759 MINT:MINT-707733
STRING:P18759 PaxDb:P18759 PRIDE:P18759 EnsemblFungi:YBR080C
GeneID:852372 GeneID:852377 KEGG:sce:YBR080C KEGG:sce:YBR083W
CYGD:YBR080c EvolutionaryTrace:P18759 NextBio:971158
Genevestigator:P18759 GermOnline:YBR080C GO:GO:0048211
Uniprot:P18759
Length = 758
Score = 466 (169.1 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 95/185 (51%), Positives = 135/185 (72%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV++LNNILVIGMTNR+D+ID ALLRPGR E+Q+EI LP+E GR+QI I T KMR
Sbjct: 379 MDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMREN 438
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIK-ATNKVEVDPQALEKLCIT 119
++DDVNL ELAALTKNFSGAE+EGLV++A S A+N+ + +++ + + KL +T
Sbjct: 439 NMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVT 498
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGL 179
R DFL+AL D+ PAFG S+E L+ + G++ + V L+ G +++Q ++++ S L
Sbjct: 499 REDFLNALN-DVTPAFGISEEDLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDKSRL 557
Query: 180 VSVLL 184
VS+L+
Sbjct: 558 VSLLI 562
Score = 279 (103.3 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 54/75 (72%), Positives = 63/75 (84%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G S LHIIIFDE+D++ K RG+ G TGV D VVNQLL+KMDGV++LNNILVIGMTNR+
Sbjct: 338 GEESSLHIIIFDELDSVFKQRGSRGDGTGVGDNVVNQLLAKMDGVDQLNNILVIGMTNRK 397
Query: 341 DMIDEALLRPGRLEV 355
D+ID ALLRPGR EV
Sbjct: 398 DLIDSALLRPGRFEV 412
Score = 39 (18.8 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 188 KVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFT--LAYSPD 233
K+P + +N + + T+H++V+ P Y A SP+
Sbjct: 3 KIPGFGKAAANHTPPDMTNMDTRTRHLKVSNCPNNSYALANVAAVSPN 50
>DICTYBASE|DDB_G0276153 [details] [associations]
symbol:nsfA "N-ethylmaleimide-sensitive fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006928
"cellular component movement" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276153 GO:GO:0005524 GO:GO:0016020
GO:GO:0046872 GO:GO:0015031 GO:GO:0006909 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0010008 GO:GO:0006935
GO:GO:0030659 HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 KO:K06027 OMA:MTSGQRV
EMBL:AF006826 RefSeq:XP_643273.1 ProteinModelPortal:Q75JI3
IntAct:Q75JI3 STRING:Q75JI3 EnsemblProtists:DDB0185052
GeneID:8620316 KEGG:ddi:DDB_G0276153 Uniprot:Q75JI3
Length = 738
Score = 456 (165.6 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 95/186 (51%), Positives = 130/186 (69%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE LNNILVIGMTNR+DMIDEALLRPGRLE+ +EISLP+E GR QI +IHTAKMR
Sbjct: 362 IDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGREQIFKIHTAKMRDQ 421
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATN--KVEVDPQALEKLCI 118
L DVNL A T+N+SGAE+EG+V++A S A +R + N VE+ P+ + K+C
Sbjct: 422 NALDKDVNLANYAHTTRNYSGAEIEGVVKSAASYAFSRQVDTKNIKNVEIKPEDI-KVC- 479
Query: 119 TRADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSG 178
DF A+ T++ P+FGS+D E + GI+N+G + L++G F++Q K + +
Sbjct: 480 -DQDFKRAI-TEVTPSFGSTDNQFESYAENGIINYGPVFDKLLQSGNAFVEQVKKSNRTP 537
Query: 179 LVSVLL 184
++SVLL
Sbjct: 538 MMSVLL 543
Score = 303 (111.7 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 59/75 (78%), Positives = 69/75 (92%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G +SGLHIIIFDE+DAICK+RG+ G++GV D+VVNQLL+ +DGVE LNNILVIGMTNR+
Sbjct: 321 GDDSGLHIIIFDELDAICKSRGSRQGDSGVGDSVVNQLLAMIDGVESLNNILVIGMTNRK 380
Query: 341 DMIDEALLRPGRLEV 355
DMIDEALLRPGRLEV
Sbjct: 381 DMIDEALLRPGRLEV 395
Score = 58 (25.5 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 24/116 (20%), Positives = 52/116 (44%)
Query: 151 LNWGTPVQECLEAGRIFIQQSKDTESSGLVSVLLEVDKVPTDELSLSNFAAANKDDFVED 210
+++ PV + + ++ +Q S D E + L P S F + + +
Sbjct: 1 MSYPPPVGDSI---KLKVQASNDPEEAFTNRAYL-----PISSFSFL-FPNVQSNLYTTN 51
Query: 211 TKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVKPFFFNP 266
T +I++ G YI + + + ++K I S R W +S ++++ V+ F++P
Sbjct: 52 TNYIKIRVG-ANEYILSASPNKNMKPDSIALSKALRGWMYVSNNEEVYVE--FYDP 104
>UNIPROTKB|G4MRG5 [details] [associations]
symbol:MGG_02418 "Vesicular-fusion protein SEC18"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 KO:K06027 RefSeq:XP_003709204.1
ProteinModelPortal:G4MRG5 EnsemblFungi:MGG_02418T0 GeneID:2681515
KEGG:mgr:MGG_02418 Uniprot:G4MRG5
Length = 835
Score = 454 (164.9 bits), Expect = 3.8e-42, P = 3.8e-42
Identities = 110/241 (45%), Positives = 147/241 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGV +LNNIL+IGMTNR+DMID+ALLRPGRLE+Q+EISLP+E GR +ILQIHT KM
Sbjct: 448 LDGVNQLNNILLIGMTNRKDMIDDALLRPGRLEVQVEISLPDEPGREKILQIHTTKMVKN 507
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ DV+L+ELAA+TKNFSGAE+ GLV+AA S A NR K V E + + R
Sbjct: 508 NVIESDVDLRELAAMTKNFSGAEISGLVKAATSFAFNRHTKVGTMAGVSDNVAE-MKVNR 566
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFLHAL ++KPAFG ++ L + GI+++ + L G I + +D E L+
Sbjct: 567 DDFLHALG-EVKPAFGMDEDKLGAVIRHGIIHFSPAIDSILRDGMINVDAVRDLEQLNLL 625
Query: 181 SVLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTG----PGR----HYIFTLAY-S 231
SVLL + ++ A + FV+ T E+ G G+ H +FT AY S
Sbjct: 626 SVLLHGPEGSGKTAMAAHIAIQSGFPFVK-TITAEMLVGCRDEVGKKDMIHKVFTDAYKS 684
Query: 232 P 232
P
Sbjct: 685 P 685
Score = 308 (113.5 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 60/78 (76%), Positives = 70/78 (89%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGT-AGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
E G SGLHIIIFDE+DA+CK RG+ +GG TGV D+VVNQLLSK+DGV +LNNIL+IGMT
Sbjct: 404 EKGDESGLHIIIFDELDAVCKQRGSGSGGGTGVGDSVVNQLLSKLDGVNQLNNILLIGMT 463
Query: 338 NRRDMIDEALLRPGRLEV 355
NR+DMID+ALLRPGRLEV
Sbjct: 464 NRKDMIDDALLRPGRLEV 481
Score = 60 (26.2 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 25/100 (25%), Positives = 40/100 (40%)
Query: 187 DKVPTDELSLSNFAAANKDDFVE--DTKHIEVTTGPGRH--YIFTLAYSPDVKRGFIGFS 242
DK +N A + DF D H TGP Y+ +P G I S
Sbjct: 90 DKTLQMNYIFTNICAVSPSDFPSSRDGDHYIRLTGPQLRGDYVVMARPTPGFPPGCISLS 149
Query: 243 LLQRKWAELSLHQDIDVKPFFFNPKNT-SEFLCTIILEAG 281
QR W ++ L +++ + ++P + +L I +E G
Sbjct: 150 DPQRTWLQVGLMDELEGE--LYDPLGGGTPYLGAIDVEVG 187
>TAIR|locus:2135378 [details] [associations]
symbol:NSF "N-ethylmaleimide sensitive factor"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0009506 GO:GO:0005524
GO:GO:0005794 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016192 GO:GO:0046872 EMBL:AL161502 GO:GO:0015031
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
EMBL:AF128393 KO:K06027 EMBL:AY102111 IPI:IPI00527613 PIR:G85061
RefSeq:NP_192400.2 UniGene:At.33942 UniGene:At.67369
ProteinModelPortal:Q9M0Y8 SMR:Q9M0Y8 IntAct:Q9M0Y8 STRING:Q9M0Y8
PaxDb:Q9M0Y8 PRIDE:Q9M0Y8 EnsemblPlants:AT4G04910.1 GeneID:825830
KEGG:ath:AT4G04910 GeneFarm:2444 TAIR:At4g04910
HOGENOM:HOG000198544 InParanoid:Q9M0Y8 OMA:MTSGQRV PhylomeDB:Q9M0Y8
ProtClustDB:CLSN2690750 Genevestigator:Q9M0Y8 GermOnline:AT4G04910
Uniprot:Q9M0Y8
Length = 742
Score = 444 (161.4 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 94/185 (50%), Positives = 131/185 (70%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE LNN+L+IGMTNR+D++DEALLRPGRLE+Q+EISLP+E GR+QILQIHT KM+
Sbjct: 355 IDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKEN 414
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
L D+NL+ELAA TKN+SGAELEG+V++A S A+NR + + + P E + IT
Sbjct: 415 SFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTK--PVEEENIKITM 472
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DFLHA+ +++PAFG+S + LE G+++ G + + ++Q K + S LV
Sbjct: 473 EDFLHAIY-EVQPAFGASTDDLERCRLNGMVDCGHRHNHIYKRAMLLVEQVKVSTRSPLV 531
Query: 181 SVLLE 185
+ LLE
Sbjct: 532 TCLLE 536
Score = 296 (109.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 281 GPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRR 340
G S LH+IIFDEIDAICK+RG+ TGVHD++VNQLL+K+DGVE LNN+L+IGMTNR+
Sbjct: 314 GDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRK 373
Query: 341 DMIDEALLRPGRLEV 355
D++DEALLRPGRLEV
Sbjct: 374 DLLDEALLRPGRLEV 388
Score = 57 (25.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVE-DTKHIEV-TTGPGRHYIFTLAYSPDVKRGFIGF 241
+ V P+ +L+ +N A + D + ++ +I +L ++ G I
Sbjct: 12 MTVTNTPSADLAFTNLAYCSSSDLRQFSVPGSDLFLANVADSFILSLCGHGSIRDGNIAL 71
Query: 242 SLLQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILE 279
+ +QR+ A +S + V F P+N + T+ LE
Sbjct: 72 NAIQRRHARVSTGDMVSVSRFV-PPENFDLAMLTLELE 108
>GENEDB_PFALCIPARUM|PFC0140c [details] [associations]
symbol:PFC0140c "N-ethylmaleimide-sensitive
fusion protein, putative" species:5833 "Plasmodium falciparum"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 HSSP:Q01853
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 EMBL:AL844502 KO:K06027
HOGENOM:HOG000198544 PIR:T18421 RefSeq:XP_001351105.1
ProteinModelPortal:O77313 EnsemblProtists:PFC0140c:mRNA
GeneID:814347 KEGG:pfa:PFC0140c EuPathDB:PlasmoDB:PF3D7_0303000
OMA:ESAHECE ProtClustDB:CLSZ2432490 Uniprot:O77313
Length = 783
Score = 432 (157.1 bits), Expect = 7.3e-40, P = 7.3e-40
Identities = 92/184 (50%), Positives = 125/184 (67%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGV LNNIL+IGMTNR D+IDEALLRPGR EL +EISLPN++GR+QIL IHT MR
Sbjct: 393 IDGVNSLNNILLIGMTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNIHTKNMRMS 452
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
KL+ DVN+ ELA T NFSGAE+EGLVR S A R I + + P + + IT+
Sbjct: 453 NKLSSDVNILELAERTPNFSGAEIEGLVRNTVSYAFERHINFNDLTK--PINADDIMITK 510
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF+ AL+ + KPAFG+ ++ + + L GI+N+G + ++ I+Q D E++ L+
Sbjct: 511 NDFMKALK-ETKPAFGAEEDIIGNLLCNGIINYGKEYENIENTCKLLIKQIVDNENTKLM 569
Query: 181 SVLL 184
S+LL
Sbjct: 570 SILL 573
Score = 278 (102.9 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 56/78 (71%), Positives = 66/78 (84%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGN-TGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
++G NS LHIII DEIDAIC+ RG G + TGV+D+VVNQLLSK+DGV LNNIL+IGMT
Sbjct: 349 QSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDSVVNQLLSKIDGVNSLNNILLIGMT 408
Query: 338 NRRDMIDEALLRPGRLEV 355
NR D+IDEALLRPGR E+
Sbjct: 409 NRIDLIDEALLRPGRFEL 426
>UNIPROTKB|O77313 [details] [associations]
symbol:PFC0140c "N-ethylmaleimide sensitive fusion protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016887 HSSP:Q01853 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
EMBL:AL844502 KO:K06027 HOGENOM:HOG000198544 PIR:T18421
RefSeq:XP_001351105.1 ProteinModelPortal:O77313
EnsemblProtists:PFC0140c:mRNA GeneID:814347 KEGG:pfa:PFC0140c
EuPathDB:PlasmoDB:PF3D7_0303000 OMA:ESAHECE ProtClustDB:CLSZ2432490
Uniprot:O77313
Length = 783
Score = 432 (157.1 bits), Expect = 7.3e-40, P = 7.3e-40
Identities = 92/184 (50%), Positives = 125/184 (67%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGV LNNIL+IGMTNR D+IDEALLRPGR EL +EISLPN++GR+QIL IHT MR
Sbjct: 393 IDGVNSLNNILLIGMTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNIHTKNMRMS 452
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
KL+ DVN+ ELA T NFSGAE+EGLVR S A R I + + P + + IT+
Sbjct: 453 NKLSSDVNILELAERTPNFSGAEIEGLVRNTVSYAFERHINFNDLTK--PINADDIMITK 510
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLV 180
DF+ AL+ + KPAFG+ ++ + + L GI+N+G + ++ I+Q D E++ L+
Sbjct: 511 NDFMKALK-ETKPAFGAEEDIIGNLLCNGIINYGKEYENIENTCKLLIKQIVDNENTKLM 569
Query: 181 SVLL 184
S+LL
Sbjct: 570 SILL 573
Score = 278 (102.9 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 56/78 (71%), Positives = 66/78 (84%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGN-TGVHDTVVNQLLSKMDGVERLNNILVIGMT 337
++G NS LHIII DEIDAIC+ RG G + TGV+D+VVNQLLSK+DGV LNNIL+IGMT
Sbjct: 349 QSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDSVVNQLLSKIDGVNSLNNILLIGMT 408
Query: 338 NRRDMIDEALLRPGRLEV 355
NR D+IDEALLRPGR E+
Sbjct: 409 NRIDLIDEALLRPGRFEL 426
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 203 (76.5 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 48/132 (36%), Positives = 82/132 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +N++V+ TNR + ID AL R GR + ++++ +P+ GR++IL+IHT M
Sbjct: 352 MDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNM--- 408
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKV-----EVDPQALEK 115
KLADDV+L+++AA T + G++L L A AM ++ + + + E+D + L+
Sbjct: 409 -KLADDVDLEQIAAETHGYVGSDLASLCSEA---AMQQIREKMDMIDLDEDEIDAEVLDS 464
Query: 116 LCITRADFLHAL 127
L +T +F AL
Sbjct: 465 LGVTMDNFRFAL 476
Score = 202 (76.2 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
++ DE+D+I KARG + G++G D VVNQLL++MDGV N+ VIG TNR D ID AL
Sbjct: 593 VVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPAL 652
Query: 348 LRPGRLE 354
+RPGRL+
Sbjct: 653 MRPGRLD 659
Score = 199 (75.1 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 47/107 (43%), Positives = 67/107 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV N+ VIG TNR D ID AL+RPGRL+ + + LP+E+ R ILQ ++R +
Sbjct: 627 MDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQ---TQLR-H 682
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE 107
+A+DV+L+ +A T FSGA+LE +V+ A A+ I+ K E
Sbjct: 683 TPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRE 729
Score = 129 (50.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA NS II DEID+I R G V VV+QLL+ MDG++ +N++V+ TN
Sbjct: 312 EAEKNSPA-IIFIDEIDSIAPKREKTNGE--VERRVVSQLLTLMDGMKARSNVVVMAATN 368
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 369 RPNSIDPALRRFGRFD 384
Score = 41 (19.5 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 40/168 (23%), Positives = 70/168 (41%)
Query: 182 VLLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGF 241
+L E+D V + + ++ A N+ D ++ PGR + L Y P + F
Sbjct: 623 LLTEMDGVNSKK-NVFVIGATNRPDQIDPA-----LMRPGR--LDQLIYVP-LPDEEARF 673
Query: 242 SLLQRKWAELSLHQDIDVKPFFFNPKNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKAR 301
S+LQ + + +D+D++ K T F LE + + I D I+ K R
Sbjct: 674 SILQTQLRHTPVAEDVDLRAV---AKATHGF-SGADLEFVVQRAVKLAIKDSIEEDIK-R 728
Query: 302 GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLR 349
G D V+++ S + V+R + + M RR + D + R
Sbjct: 729 ENETGEAPADDVVMDEDAS-VSQVQRHHVEEAMKMA-RRSVSDAEVRR 774
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 224 (83.9 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 52/132 (39%), Positives = 83/132 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VI TNR++ ID AL R GR + +++I +P+++GR +IL+IHT M
Sbjct: 335 MDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKNM--- 391
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL-VRAAQSCAMNRL--IKATNKVEVDPQALEKLC 117
KL+ DV L+ELA+ T F GA+L L AA +C ++ I +++ +D + LE +C
Sbjct: 392 -KLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEI-IDKEVLESMC 449
Query: 118 ITRADFLHALET 129
+T+ F AL T
Sbjct: 450 VTQDHFNMALGT 461
Score = 174 (66.3 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I RG++ G +G D V+NQLL+++DGV N+ IG TNR +++DEA
Sbjct: 576 VLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEA 635
Query: 347 LLRPGRLE 354
LLRPGRL+
Sbjct: 636 LLRPGRLD 643
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 43/102 (42%), Positives = 60/102 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGV N+ IG TNR +++DEALLRPGRL+ + I LP+ R+ IL TA +R
Sbjct: 611 IDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISIL---TAILRKC 667
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
+A++V + LA T FSGA+L L + A A+ I A
Sbjct: 668 P-VAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDA 708
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 34/76 (44%), Positives = 44/76 (57%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA NS II DEID+I R G V VV+QLL+ MDG++ ++VI TN
Sbjct: 295 EAEKNSPA-IIFIDEIDSIAPKREKTNGE--VERRVVSQLLTLMDGIKSRGQVVVIAATN 351
Query: 339 RRDMIDEALLRPGRLE 354
R++ ID AL R GR +
Sbjct: 352 RQNSIDPALRRFGRFD 367
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 224 (83.9 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 52/132 (39%), Positives = 83/132 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VI TNR++ ID AL R GR + +++I +P+++GR +IL+IHT M
Sbjct: 335 MDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILRIHTKNM--- 391
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL-VRAAQSCAMNRL--IKATNKVEVDPQALEKLC 117
KL+ DV L+ELA+ T F GA+L L AA +C ++ I +++ +D + LE +C
Sbjct: 392 -KLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEI-IDKEVLESMC 449
Query: 118 ITRADFLHALET 129
+T+ F AL T
Sbjct: 450 VTQDHFNMALGT 461
Score = 174 (66.3 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I RG++ G +G D V+NQLL+++DGV N+ IG TNR +++DEA
Sbjct: 576 VLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEA 635
Query: 347 LLRPGRLE 354
LLRPGRL+
Sbjct: 636 LLRPGRLD 643
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 43/102 (42%), Positives = 60/102 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGV N+ IG TNR +++DEALLRPGRL+ + I LP+ R+ IL TA +R
Sbjct: 611 IDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISIL---TAILRKC 667
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
+A++V + LA T FSGA+L L + A A+ I A
Sbjct: 668 P-VAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDA 708
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 34/76 (44%), Positives = 44/76 (57%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA NS II DEID+I R G V VV+QLL+ MDG++ ++VI TN
Sbjct: 295 EAEKNSPA-IIFIDEIDSIAPKREKTNGE--VERRVVSQLLTLMDGIKSRGQVVVIAATN 351
Query: 339 RRDMIDEALLRPGRLE 354
R++ ID AL R GR +
Sbjct: 352 RQNSIDPALRRFGRFD 367
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 207 (77.9 bits), Expect = 8.8e-29, Sum P(2) = 8.8e-29
Identities = 49/129 (37%), Positives = 80/129 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +N++VI TNR + ID AL R GR + +++I +P+ GR+++L+IHT M
Sbjct: 342 MDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNM--- 398
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLV-RAAQSCAMNRL-IKATNKVEVDPQALEKLCI 118
KLADDV+L+ LAA T + GA++ L AA ++ + ++ E+D + L+ L +
Sbjct: 399 -KLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGV 457
Query: 119 TRADFLHAL 127
T +F AL
Sbjct: 458 TMDNFRFAL 466
Score = 187 (70.9 bits), Expect = 8.8e-29, Sum P(2) = 8.8e-29
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ DE+D+I KARG + G+ G D VVNQLL++MDG+ N+ VIG TNR D ID A
Sbjct: 583 VVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 642
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 643 ILRPGRLD 650
Score = 177 (67.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 43/111 (38%), Positives = 65/111 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ VIG TNR D ID A+LRPGRL+ + + LP+E+ R+ IL A++R
Sbjct: 618 MDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILN---AQLRK- 673
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
L + L +A T+ FSGA+L +V+ A A+ I+A + E + +
Sbjct: 674 TPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKE 724
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DEID+I R G V VV+QLL+ MDG++ +N++VI TN
Sbjct: 302 EAEKNAPA-IIFIDEIDSIAPKRDKTNGE--VERRVVSQLLTLMDGMKARSNVVVIAATN 358
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 359 RPNSIDPALRRFGRFD 374
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 203 (76.5 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 48/129 (37%), Positives = 78/129 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +N++VI TNR + ID AL R GR + +++I +P+ +GR++IL+IHT M
Sbjct: 343 MDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKNM--- 399
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE--VDPQALEKLCI 118
KLADDV+L+ +A+ T F GA++ L A + + + E +D + L L +
Sbjct: 400 -KLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGV 458
Query: 119 TRADFLHAL 127
T+ +F AL
Sbjct: 459 TQDNFRFAL 467
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 47/116 (40%), Positives = 70/116 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ VIG TNR D ID ALLRPGRL+ + + LP+E R+ ILQ A++R+
Sbjct: 619 MDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQ---AQLRN- 674
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L ++L E+A +T FSGA+L +V+ + A+ I+A K+ + EK+
Sbjct: 675 TPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKV 730
Score = 191 (72.3 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 38/68 (55%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ DE+D+I KARG + G+ G D VVNQLL++MDG+ N+ VIG TNR D ID A
Sbjct: 584 VVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 643
Query: 347 LLRPGRLE 354
LLRPGRL+
Sbjct: 644 LLRPGRLD 651
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA NS II DEID+I R G V VV+QLL+ MDG++ +N++VI TN
Sbjct: 303 EAEKNSP-SIIFIDEIDSIAPKRDKTNGE--VERRVVSQLLTLMDGMKARSNVVVIAATN 359
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 360 RPNSIDPALRRFGRFD 375
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 203 (76.5 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 48/129 (37%), Positives = 78/129 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +N++VI TNR + ID AL R GR + +++I +P+ +GR++IL+IHT M
Sbjct: 343 MDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILRIHTKNM--- 399
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE--VDPQALEKLCI 118
KLADDV+L+ +A+ T F GA++ L A + + + E +D + L L +
Sbjct: 400 -KLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGV 458
Query: 119 TRADFLHAL 127
T+ +F AL
Sbjct: 459 TQDNFRFAL 467
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 47/116 (40%), Positives = 70/116 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ VIG TNR D ID ALLRPGRL+ + + LP+E R+ ILQ A++R+
Sbjct: 619 MDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQ---AQLRN- 674
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L ++L E+A +T FSGA+L +V+ + A+ I+A K+ + EK+
Sbjct: 675 TPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKV 730
Score = 191 (72.3 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 38/68 (55%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ DE+D+I KARG + G+ G D VVNQLL++MDG+ N+ VIG TNR D ID A
Sbjct: 584 VVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 643
Query: 347 LLRPGRLE 354
LLRPGRL+
Sbjct: 644 LLRPGRLD 651
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA NS II DEID+I R G V VV+QLL+ MDG++ +N++VI TN
Sbjct: 303 EAEKNSP-SIIFIDEIDSIAPKRDKTNGE--VERRVVSQLLTLMDGMKARSNVVVIAATN 359
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 360 RPNSIDPALRRFGRFD 375
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 198 (74.8 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 189 (71.6 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 185 (70.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 45/118 (38%), Positives = 69/118 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R+ IL+ A +R
Sbjct: 608 MDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLI----KATNKVEVDPQALE 114
++ DV+L LA +T FSGA+L + + A A+ I + + + +P A+E
Sbjct: 664 SPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAME 721
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 194 (73.4 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 48/130 (36%), Positives = 77/130 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 64 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 120
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++ T GA+L L A A+ + LI ++ +D + + L
Sbjct: 121 -KLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 178
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 179 VTMDDFRWAL 188
Score = 190 (71.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 48/118 (40%), Positives = 70/118 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 340 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 395
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 396 SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 453
Score = 188 (71.2 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 305 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 364
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 365 ILRPGRLD 372
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 24 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 80
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 81 RPNSIDPALRRFGRFD 96
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 198 (74.8 bits), Expect = 7.5e-28, Sum P(2) = 7.5e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 330 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 386
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 387 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 444
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 445 VTMDDFRWAL 454
Score = 190 (71.9 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 48/118 (40%), Positives = 70/118 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 606 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 661
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 662 SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 719
Score = 188 (71.2 bits), Expect = 7.5e-28, Sum P(2) = 7.5e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 571 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 630
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 631 ILRPGRLD 638
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 198 (74.8 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 192 (72.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L+ LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 721
Score = 188 (71.2 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 198 (74.8 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 192 (72.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L+ LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 721
Score = 188 (71.2 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 198 (74.8 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 192 (72.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L+ LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 721
Score = 188 (71.2 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 198 (74.8 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 192 (72.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L+ LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 721
Score = 188 (71.2 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 198 (74.8 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 192 (72.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L+ LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 721
Score = 188 (71.2 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 198 (74.8 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 192 (72.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L+ LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 721
Score = 188 (71.2 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 198 (74.8 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 193 (73.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 48/118 (40%), Positives = 70/118 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ + K
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA 667
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
K A DV+L+ LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 668 K--AGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 723
Score = 188 (71.2 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 198 (74.8 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 336 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 392
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 393 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 450
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 451 VTMDDFRWAL 460
Score = 190 (71.9 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 48/118 (40%), Positives = 70/118 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 612 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 667
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 668 SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 725
Score = 188 (71.2 bits), Expect = 7.7e-28, Sum P(2) = 7.7e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 577 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 636
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 637 ILRPGRLD 644
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 198 (74.8 bits), Expect = 8.1e-28, Sum P(2) = 8.1e-28
Identities = 49/130 (37%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 348 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM--- 404
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KLADDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 405 -KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 462
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 463 VTMDDFRWAL 472
Score = 192 (72.6 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E RV IL+ A +R
Sbjct: 624 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK---ANLRK- 679
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALE 114
+A DV+L+ LA +T FSGA+L + + A A+ I++ + E +P A+E
Sbjct: 680 SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAME 737
Score = 188 (71.2 bits), Expect = 8.1e-28, Sum P(2) = 8.1e-28
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 589 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 648
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 649 ILRPGRLD 656
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 308 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 364
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 365 RPNSIDPALRRFGRFD 380
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 196 (74.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 48/130 (36%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KL+DDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 188 (71.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 46/118 (38%), Positives = 69/118 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R+ IL+ A +R
Sbjct: 608 MDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLI----KATNKVEVDPQALE 114
+A DV+L LA +T FSGA+L + + A A+ I + + + +P A+E
Sbjct: 664 SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAME 721
Score = 119 (46.9 bits), Expect = 0.00068, P = 0.00068
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 192 (72.6 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ FDE+D+I KARG G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 575 ILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPA 634
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 635 ILRPGRLD 642
Score = 192 (72.6 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 45/129 (34%), Positives = 77/129 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + +D AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 334 MDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEILQIHTKNM--- 390
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE--VDPQALEKLCI 118
KL++DV+L++++A T GA+L L A A+ + + + + +D L L +
Sbjct: 391 -KLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAV 449
Query: 119 TRADFLHAL 127
T DF AL
Sbjct: 450 TMDDFKWAL 458
Score = 185 (70.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 45/112 (40%), Positives = 66/112 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+ R IL+ A +R
Sbjct: 610 MDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILR---ANLRK- 665
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQA 112
+A DV+L L+ +T+ FSGA+L + + A A+ I+A + E QA
Sbjct: 666 SPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQA 717
Score = 38 (18.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 133 PAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGLVSVLLEVDKVPTD 192
PA G+SD E F S IL ++ + R+ + ++ + ++S ++ + +V +
Sbjct: 2 PASGASDPKTEDF-STAIL------KQKIRPNRLIVDEATNEDNS-----IVCLSQVKME 49
Query: 193 ELSL 196
EL L
Sbjct: 50 ELQL 53
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 196 (74.1 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 48/130 (36%), Positives = 78/130 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ +++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 332 MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNM--- 388
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR---LIKATNKVEVDPQALEKLC 117
KL+DDV+L+++A T GA+L L A A+ + LI ++ +D + + L
Sbjct: 389 -KLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET-IDAEVMNSLA 446
Query: 118 ITRADFLHAL 127
+T DF AL
Sbjct: 447 VTMDDFRWAL 456
Score = 186 (70.5 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPA 632
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 633 ILRPGRLD 640
Score = 181 (68.8 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 45/111 (40%), Positives = 66/111 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R+ IL+ A +R
Sbjct: 608 MDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILK---ANLRK- 663
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
+A DV++ LA +T FSGA+L + + A A+ I+ + E D Q
Sbjct: 664 SPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQ 714
Score = 119 (46.9 bits), Expect = 0.00068, P = 0.00068
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DE+DAI R G V +V+QLL+ MDG+++ +++V+ TN
Sbjct: 292 EAEKNAPA-IIFIDELDAIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATN 348
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 349 RPNSIDPALRRFGRFD 364
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 312 (114.9 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 121/373 (32%), Positives = 178/373 (47%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
++ V +LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+R
Sbjct: 119 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR-- 176
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLCIT 119
L + LA LT F GA+L L R A CA+NR L+K + + +P+ +E L +
Sbjct: 177 --LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPE-MEDLP-S 232
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQE------CLEAGRIFIQQSKD 173
+ L T+ P + DE L+ L G+L P+ E C+E + S
Sbjct: 233 KGVQEERLGTE--PTSETQDE-LQRLL--GLLRDQDPLSEEQMQGLCIELNDFIVALSSV 287
Query: 174 TESS---GLVSV----LLEVDKVPT--DELSLSNFAAA-NKDDFVEDTKHIEVTTGPGRH 223
S+ G V+V ++ + +EL+++ A N D F K + + T G
Sbjct: 288 QPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQF----KALGLVTPAG-- 341
Query: 224 YIFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAG 281
LA P G +LL + A S I VK P N SE + +
Sbjct: 342 --VLLAGPPGC-----GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 394
Query: 282 PNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRD 341
NS +I FDE+DA+C R TG VVNQLL++MDG+E + ++ TNR D
Sbjct: 395 KNSAPCVIFFDEVDALCPRRSDR--ETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPD 452
Query: 342 MIDEALLRPGRLE 354
+ID A+LRPGRL+
Sbjct: 453 IIDPAILRPGRLD 465
Score = 162 (62.1 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 39/100 (39%), Positives = 59/100 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP R+ IL+ T K +
Sbjct: 433 MDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTIT-KNGTK 491
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNR 98
L DVNL+ +A + ++GA+L LVR A CA+ +
Sbjct: 492 PPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 531
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 192 (72.6 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 50/129 (38%), Positives = 75/129 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV+ +N++VI TNR + ID AL R GR + +++I +P+ GR++IL+IHT M
Sbjct: 338 MDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM--- 394
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAA---QSCAMNRLIKATNKVEVDPQALEKLC 117
KLADDV+L+++A F GA+L L A Q LI + ++D + L L
Sbjct: 395 -KLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDD-QIDAEVLNSLA 452
Query: 118 ITRADFLHA 126
+T +F A
Sbjct: 453 VTMENFRFA 461
Score = 189 (71.6 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 288 IIIFDEIDAICKARGT-AGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
++ FDE+D+I KARG AGG+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID
Sbjct: 579 VLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDP 638
Query: 346 ALLRPGRLE 354
A+LRPGRL+
Sbjct: 639 AVLRPGRLD 647
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/111 (40%), Positives = 66/111 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R QIL+ A +R
Sbjct: 615 MDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILK---ASLRK- 670
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
L+ D++L LA T FSGA+L + + A A+ I+ ++E + Q
Sbjct: 671 TPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQ 721
Score = 128 (50.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ DEIDAI R G V +V+QLL+ MDGV+ +N++VI TNR + ID AL
Sbjct: 306 ILFIDEIDAIAPKREKTNGE--VERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGAL 363
Query: 348 LRPGRLE 354
R GR +
Sbjct: 364 RRFGRFD 370
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 192 (72.6 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 50/129 (38%), Positives = 75/129 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGV+ +N++VI TNR + ID AL R GR + +++I +P+ GR++IL+IHT M
Sbjct: 338 MDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM--- 394
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAA---QSCAMNRLIKATNKVEVDPQALEKLC 117
KLADDV+L+++A F GA+L L A Q LI + ++D + L L
Sbjct: 395 -KLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDD-QIDAEVLNSLA 452
Query: 118 ITRADFLHA 126
+T +F A
Sbjct: 453 VTMENFRFA 461
Score = 189 (71.6 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 288 IIIFDEIDAICKARGT-AGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
++ FDE+D+I KARG AGG+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID
Sbjct: 579 VLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDP 638
Query: 346 ALLRPGRLE 354
A+LRPGRL+
Sbjct: 639 AVLRPGRLD 647
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/111 (40%), Positives = 66/111 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R QIL+ A +R
Sbjct: 615 MDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILK---ASLRK- 670
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
L+ D++L LA T FSGA+L + + A A+ I+ ++E + Q
Sbjct: 671 TPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQ 721
Score = 128 (50.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ DEIDAI R G V +V+QLL+ MDGV+ +N++VI TNR + ID AL
Sbjct: 306 ILFIDEIDAIAPKREKTNGE--VERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGAL 363
Query: 348 LRPGRLE 354
R GR +
Sbjct: 364 RRFGRFD 370
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 314 (115.6 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 122/373 (32%), Positives = 175/373 (46%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
++ V +LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+R
Sbjct: 394 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLR-- 451
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLCIT 119
L + N LA LT F GA+L L R A CA+NR L+K + + P+ +E L +
Sbjct: 452 --LPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPE-IEGLP-S 507
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQE------CLEAGRIFIQQSKD 173
D L + P + DE L+ L G+L P+ E C+E + ++
Sbjct: 508 EGDQEERLGAE--PTSETQDE-LQRLL--GLLRDQDPLSEEQMQGLCIELNDFIVALAEV 562
Query: 174 TESS---GLVSV----LLEVDKVPT--DELSLSNFAAA-NKDDFVEDTKHIEVTTGPGRH 223
S+ G V+V ++ + DEL ++ A N D F T G G
Sbjct: 563 QPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFR--------TLGLGTP 614
Query: 224 YIFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAG 281
LA P G +LL + A S I VK P N SE + +
Sbjct: 615 AGILLAGPPGC-----GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Query: 282 PNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRD 341
NS +I FDE+DA+C R TG VVNQLL++MDG+E + ++ TNR D
Sbjct: 670 KNSAPCVIFFDEVDALCPRRSDR--ETGASVRVVNQLLTEMDGLETRQQVFILAATNRPD 727
Query: 342 MIDEALLRPGRLE 354
+ID A+LRPGRL+
Sbjct: 728 IIDPAILRPGRLD 740
Score = 186 (70.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 54/152 (35%), Positives = 82/152 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP RV IL+ T K +
Sbjct: 708 MDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTIT-KNGTK 766
Query: 61 KKLADDVNLKELAA-LTKN-FSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCI 118
L +DVNL+ +A L N ++GA+L LVR A CA+ + I A K V L+ +
Sbjct: 767 PPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITA-QKNGVGAGELK---V 822
Query: 119 TRADFLHALETDIKPAFGSSDESLEHFLSRGI 150
+ F A + +KP+ D+ + L R +
Sbjct: 823 SHKHFEDAFKK-VKPSISIKDQVMYEALQRSL 853
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 312 (114.9 bits), Expect = 6.1e-27, P = 6.1e-27
Identities = 121/373 (32%), Positives = 178/373 (47%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
++ V +LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+R
Sbjct: 278 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR-- 335
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLCIT 119
L + LA LT F GA+L L R A CA+NR L+K + + +P+ +E L +
Sbjct: 336 --LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPE-MEDLP-S 391
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQE------CLEAGRIFIQQSKD 173
+ L T+ P + DE L+ L G+L P+ E C+E + S
Sbjct: 392 KGVQEERLGTE--PTSETQDE-LQRLL--GLLRDQDPLSEEQMQGLCIELNDFIVALSSV 446
Query: 174 TESS---GLVSV----LLEVDKVPT--DELSLSNFAAA-NKDDFVEDTKHIEVTTGPGRH 223
S+ G V+V ++ + +EL+++ A N D F K + + T G
Sbjct: 447 QPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQF----KALGLVTPAG-- 500
Query: 224 YIFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAG 281
LA P G +LL + A S I VK P N SE + +
Sbjct: 501 --VLLAGPPGC-----GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 553
Query: 282 PNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRD 341
NS +I FDE+DA+C R TG VVNQLL++MDG+E + ++ TNR D
Sbjct: 554 KNSAPCVIFFDEVDALCPRRSDR--ETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPD 611
Query: 342 MIDEALLRPGRLE 354
+ID A+LRPGRL+
Sbjct: 612 IIDPAILRPGRLD 624
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 39/100 (39%), Positives = 59/100 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP R+ IL+ T K +
Sbjct: 592 MDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTIT-KNGTK 650
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNR 98
L DVNL+ +A + ++GA+L LVR A CA+ +
Sbjct: 651 PPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 690
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 198 (74.8 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 47/132 (35%), Positives = 81/132 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +N++V+ TNR + ID AL R GR + +++I +P+ GR++ILQIHT M
Sbjct: 350 MDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNM--- 406
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE-----VDPQALEK 115
KL DDV+L+++AA T + G+++ L A AM ++ + + ++ +D + L+
Sbjct: 407 -KLGDDVDLEQIAAETHGYVGSDVAALCSEA---AMQQIREKMDLIDLDEDTIDAEVLDS 462
Query: 116 LCITRADFLHAL 127
L +T +F AL
Sbjct: 463 LGVTMENFRFAL 474
Score = 179 (68.1 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DE+D+I KARG + G+ G D VVNQLL++MDG+ N+ VIG TNR + +D A
Sbjct: 592 IVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPA 651
Query: 347 LLRPGRLE 354
L RPGRL+
Sbjct: 652 LCRPGRLD 659
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 42/102 (41%), Positives = 63/102 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ VIG TNR + +D AL RPGRL+ + + LP+E GR+ IL+ A++R
Sbjct: 627 MDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILK---AQLRK- 682
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
++DDV+L+ +A T FSGA+L + + A A+ I A
Sbjct: 683 TPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITA 724
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA NS II DEID+I R G V VV+QLL+ MDG++ +N++V+ TN
Sbjct: 310 EAEKNSPA-IIFIDEIDSIAPKREKTNGE--VERRVVSQLLTLMDGMKARSNVVVMAATN 366
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 367 RPNSIDPALRRFGRFD 382
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 312 (114.9 bits), Expect = 8.3e-27, P = 8.3e-27
Identities = 121/373 (32%), Positives = 178/373 (47%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
++ V +LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+R
Sbjct: 395 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR-- 452
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLCIT 119
L + LA LT F GA+L L R A CA+NR L+K + + +P+ +E L +
Sbjct: 453 --LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPE-MEDLP-S 508
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQE------CLEAGRIFIQQSKD 173
+ L T+ P + DE L+ L G+L P+ E C+E + S
Sbjct: 509 KGVQEERLGTE--PTSETQDE-LQRLL--GLLRDQDPLSEEQMQGLCIELNDFIVALSSV 563
Query: 174 TESS---GLVSV----LLEVDKVPT--DELSLSNFAAA-NKDDFVEDTKHIEVTTGPGRH 223
S+ G V+V ++ + +EL+++ A N D F K + + T G
Sbjct: 564 QPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQF----KALGLVTPAG-- 617
Query: 224 YIFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAG 281
LA P G +LL + A S I VK P N SE + +
Sbjct: 618 --VLLAGPPGC-----GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 670
Query: 282 PNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRD 341
NS +I FDE+DA+C R TG VVNQLL++MDG+E + ++ TNR D
Sbjct: 671 KNSAPCVIFFDEVDALCPRRSDR--ETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPD 728
Query: 342 MIDEALLRPGRLE 354
+ID A+LRPGRL+
Sbjct: 729 IIDPAILRPGRLD 741
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 39/100 (39%), Positives = 59/100 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP R+ IL+ T K +
Sbjct: 709 MDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTIT-KNGTK 767
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNR 98
L DVNL+ +A + ++GA+L LVR A CA+ +
Sbjct: 768 PPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 807
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 196 (74.1 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 45/129 (34%), Positives = 78/129 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +++V+G TNR + ID AL R GR + +++I +P+E GR+++L+IHT M
Sbjct: 336 MDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM--- 392
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL-VRAAQSCAMNRL-IKATNKVEVDPQALEKLCI 118
KLA+DV+L+ ++ T + GA+L L AA C ++ + + E+D + L + +
Sbjct: 393 -KLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAV 451
Query: 119 TRADFLHAL 127
+ F AL
Sbjct: 452 SNDHFQTAL 460
Score = 177 (67.4 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIG 335
I + S ++ FDE+D+I RG + G+ G D V+NQLL++MDG+ + +IG
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D+ID ALLRPGRL+
Sbjct: 626 ATNRPDIIDPALLRPGRLD 644
Score = 175 (66.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 45/120 (37%), Positives = 68/120 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ + +IG TNR D+ID ALLRPGRL+ + I LP+E+ R QI + K
Sbjct: 612 MDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK---- 667
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLI-----KATNKVEVDPQALEK 115
+A DV+L+ LA T+ FSGA++ + + + A+ I K + E P+A+E+
Sbjct: 668 SPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAE-SPEAMEE 726
Score = 122 (48.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DEID+I R G V +V+QLL+ MDG++ +++V+G TN
Sbjct: 296 EAEKNAP-SIIFIDEIDSIAPKREKTHGE--VERRIVSQLLTLMDGLKSRAHVIVMGATN 352
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 353 RPNSIDPALRRFGRFD 368
Score = 55 (24.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 63 LADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKV-EVDPQALEKLCITRA 121
+A+ + K+FS A LE +AA ++ I N V + P +EKL + R
Sbjct: 1 MANQAESSDSKGTKKDFSTAILEKK-KAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRG 59
Query: 122 D 122
D
Sbjct: 60 D 60
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 307 (113.1 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 115/373 (30%), Positives = 175/373 (46%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
++ V +LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+R
Sbjct: 394 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR-- 451
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLCIT 119
L + + + LA LT F GA+L L R A CA+NR L++ + + +P+ + +
Sbjct: 452 --LPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVLMELQGQHKKNPEI--EASPS 507
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQE------CLEAGRIFIQQSKD 173
D T +P + E L+ L G+L P+ E C+E + S
Sbjct: 508 EGD--QEERTGAEPT-SKTQEELQRLL--GLLRNQDPLSEEQLKGLCIELNDFIVALSSV 562
Query: 174 TESS---GLVSV----LLEVDKVPT--DELSLSN-FAAANKDDFVEDTKHIEVTTGPGRH 223
S+ G +V ++ + +EL+++ F N D F + + + T G
Sbjct: 563 QPSAKREGFATVPNVTWADIGALEDIREELTMAILFLLCNPDQF----RVLGLVTPAG-- 616
Query: 224 YIFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAG 281
LA P G +LL + A S I VK P N SE + +
Sbjct: 617 --VLLAGPPGC-----GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Query: 282 PNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRD 341
NS +I FDE+DA+C R TG VVNQLL++MDG+E + ++ TNR D
Sbjct: 670 KNSAPCVIFFDEVDALCPRRSAR--ETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPD 727
Query: 342 MIDEALLRPGRLE 354
+ID A+LRPGRL+
Sbjct: 728 IIDPAILRPGRLD 740
Score = 165 (63.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 52/154 (33%), Positives = 82/154 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP R+ IL+ T K +
Sbjct: 708 MDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTIT-KNGTK 766
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCI 118
L DVNL+ +A + ++GA+L LVR A CA+ + + A K + L+ I
Sbjct: 767 PPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQEM-ARQKSGSEKGELK---I 822
Query: 119 TRADFLHALETDIKPAFGSSD----ESLEHFLSR 148
++ F A + +K + D E+L+ LSR
Sbjct: 823 SQKHFEEAFKK-VKSSISKEDRAMYEALQWSLSR 855
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 190 (71.9 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 44/129 (34%), Positives = 76/129 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +++V+G TNR + ID AL R GR + +++I +P+E GR+++L+IHT M
Sbjct: 335 MDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM--- 391
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL-VRAAQSCAMNRL-IKATNKVEVDPQALEKLCI 118
KLA+DV+L+ ++ T + GA+L L AA C ++ + +D + L + +
Sbjct: 392 -KLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAV 450
Query: 119 TRADFLHAL 127
+ F AL
Sbjct: 451 SNEHFHTAL 459
Score = 181 (68.8 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIG 335
I + S ++ FDE+D+I RG + G+ G D V+NQLL++MDG+ + +IG
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 624
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D+ID ALLRPGRL+
Sbjct: 625 ATNRPDIIDSALLRPGRLD 643
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 45/119 (37%), Positives = 70/119 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ + +IG TNR D+ID ALLRPGRL+ + I LP+ED R+ I + A +R
Sbjct: 611 MDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFK---ACLRK- 666
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE----VDPQALEK 115
+A DV++ LA T+ FSGA++ + + A A+ I+ + E +P+A+E+
Sbjct: 667 SPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEE 725
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DEID+I R G V +V+QLL+ MDG++ +++V+G TN
Sbjct: 295 EAEKNAP-SIIFIDEIDSIAPKREKTNGE--VERRIVSQLLTLMDGLKSRAHVIVMGATN 351
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 352 RPNSIDPALRRFGRFD 367
Score = 44 (20.5 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 77 KNFSGAELEGLVRAAQSCAMNRLIKATNKV-EVDPQALEKLCITRAD 122
K+FS A LE ++ ++ I N V + P +EKL + R D
Sbjct: 14 KDFSTAILERK-KSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 59
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 186 (70.5 bits), Expect = 4.1e-26, Sum P(2) = 4.1e-26
Identities = 45/139 (32%), Positives = 84/139 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ ++++V+ TNR + ID AL R GR + +++I +P+ GR+++L+IHT M
Sbjct: 329 MDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNM--- 385
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE-----VDPQALEK 115
KL DDV+L+++AA + GA+L L A A+ ++ + + ++ +D + L
Sbjct: 386 -KLHDDVDLEQIAAESHGHVGADLASLCSEA---ALQQIREKMDLIDLEDDKIDAEVLAS 441
Query: 116 LCITRADFLHALETDIKPA 134
L +T +F +A+ T P+
Sbjct: 442 LAVTMENFRYAM-TKSSPS 459
Score = 185 (70.2 bits), Expect = 4.1e-26, Sum P(2) = 4.1e-26
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG G G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 570 VLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPA 629
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 630 ILRPGRLD 637
Score = 178 (67.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 42/102 (41%), Positives = 64/102 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP++ R IL+ A +R
Sbjct: 605 MDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILK---ANLRK- 660
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
LA +V+L +A +T+ FSGA+L + + A A+ + I+A
Sbjct: 661 SPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEA 702
Score = 128 (50.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA NS II DEIDAI R G V +V+QLL+ MDG+++ ++++V+ TN
Sbjct: 289 EAEKNSPA-IIFIDEIDAIAPKRDKTHGE--VERRIVSQLLTLMDGMKKSSHLIVMAATN 345
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 346 RPNSIDPALRRFGRFD 361
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 194 (73.4 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
Identities = 45/129 (34%), Positives = 76/129 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +++V+G TNR + ID AL R GR + +++I +P+E GR+++L+IHT M
Sbjct: 335 MDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM--- 391
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL-VRAAQSCAMNRL-IKATNKVEVDPQALEKLCI 118
KLA+DV+L+ ++ T + GA+L L AA C ++ + +D + L + +
Sbjct: 392 -KLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAV 450
Query: 119 TRADFLHAL 127
T F AL
Sbjct: 451 TNEHFHTAL 459
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/119 (37%), Positives = 70/119 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ + +IG TNR D+ID ALLRPGRL+ + I LP+ED R+ I + A +R
Sbjct: 612 MDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFK---AALRK- 667
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEV----DPQALEK 115
+A DV++ LA T+ FSGA++ + + A A+ I+ + E +P+A+E+
Sbjct: 668 SPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEE 726
Score = 175 (66.7 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARG--TAGGNTGVHDTVVNQLLSKMDGVERLNNILVI 334
I + S ++ FDE+D+I RG + G G D V+NQLL++MDG+ + +I
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFII 624
Query: 335 GMTNRRDMIDEALLRPGRLE 354
G TNR D+ID ALLRPGRL+
Sbjct: 625 GATNRPDIIDSALLRPGRLD 644
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DEID+I R G V +V+QLL+ MDG++ +++V+G TN
Sbjct: 295 EAEKNAP-SIIFIDEIDSIAPKREKTNGE--VERRIVSQLLTLMDGLKSRAHVIVMGATN 351
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 352 RPNSIDPALRRFGRFD 367
Score = 44 (20.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 77 KNFSGAELEGLVRAAQSCAMNRLIKATNKV-EVDPQALEKLCITRAD 122
K+FS A LE ++ ++ I N V + P +EKL + R D
Sbjct: 14 KDFSTAILERK-KSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 59
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 192 (72.6 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 46/132 (34%), Positives = 80/132 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +N++V+ TNR + ID AL R GR + +++I +P+ GR++IL IHT M
Sbjct: 353 MDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNM--- 409
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE-----VDPQALEK 115
KL +DV+L+ +AA T + G++L L A AM ++ + + ++ +D + L+
Sbjct: 410 -KLGEDVDLETIAAETHGYVGSDLASLCSEA---AMQQIREKMDLIDLDEDTIDAEVLDS 465
Query: 116 LCITRADFLHAL 127
L +T +F +AL
Sbjct: 466 LGVTMENFRYAL 477
Score = 177 (67.4 bits), Expect = 5.9e-26, Sum P(2) = 5.9e-26
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ DE+D+I K+RG + G+ G D VVNQLL++MDG+ N+ VIG TNR + +D A
Sbjct: 595 VVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAA 654
Query: 347 LLRPGRLE 354
L+RPGRL+
Sbjct: 655 LVRPGRLD 662
Score = 164 (62.8 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 39/102 (38%), Positives = 62/102 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ VIG TNR + +D AL+RPGRL+ + + LP++ R IL+ A++R
Sbjct: 630 MDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILK---AQLRK- 685
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
+A DV+++ +A+ T FSGA+L + + A A+ I A
Sbjct: 686 TPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISA 727
Score = 129 (50.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA NS II DEID+I R G V VV+QLL+ MDG++ +N++V+ TN
Sbjct: 313 EAEKNSPA-IIFIDEIDSIAPKREKTNGE--VERRVVSQLLTLMDGMKARSNVVVMAATN 369
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 370 RPNSIDPALRRFGRFD 385
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 302 (111.4 bits), Expect = 9.8e-26, P = 9.8e-26
Identities = 114/372 (30%), Positives = 171/372 (45%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
++ V +LV+G TNR D +D AL R GR + ++ + +P+E R +ILQ K+R
Sbjct: 394 LNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRERILQTLCRKLR-- 451
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLCIT 119
L + N LA LT F GA+L L R A CA++R L++ + +P+
Sbjct: 452 --LPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHRVLMRRQEQQRTEPETGG----L 505
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQE------CLEAGRIFIQQSKD 173
+D +P + DE L+ L G+L P+ E CLE + S+
Sbjct: 506 PSDGEQGRSLGAEPPSETQDE-LQRLL--GLLRDQDPISEEQMQGLCLELNDFIVALSEV 562
Query: 174 TESS---GLVSV----LLEVDKVPT--DELSLSNFAAANKDDFVEDTKHIEVTTGPGRHY 224
S+ G V+V +V + +EL+++ A E + + + G
Sbjct: 563 QPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNP---EQFRALGLVAPAG--- 616
Query: 225 IFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGP 282
LA P G +LL + A S I VK P N SE + +
Sbjct: 617 -VLLAGPPGC-----GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAK 670
Query: 283 NSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDM 342
NS +I FDE+DA+C R TG VVNQLL++MDG+E + ++ TNR D+
Sbjct: 671 NSAPCVIFFDEVDALCPRRSDR--ETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDI 728
Query: 343 IDEALLRPGRLE 354
ID A+LRPGRL+
Sbjct: 729 IDPAILRPGRLD 740
Score = 174 (66.3 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 48/152 (31%), Positives = 79/152 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP RV IL+ T K +
Sbjct: 708 MDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTIT-KNGTK 766
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCI 118
L +DV+L+ +A + ++GA+L LVR A CA+ + I + + +L +
Sbjct: 767 PPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALRQEITG----QKNGIGTAELTV 822
Query: 119 TRADFLHALETDIKPAFGSSDESLEHFLSRGI 150
+ F A +KP+ D+ + L R +
Sbjct: 823 SHKHFEEAFRK-VKPSISVKDQRMYEALQRSL 853
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 187 (70.9 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 33/68 (48%), Positives = 52/68 (76%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I ++RG++ G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 571 VLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPA 630
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 631 ILRPGRLD 638
Score = 175 (66.7 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 43/129 (33%), Positives = 76/129 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +++V+G TNR + ID AL R GR + +++I++P+ GR++I++IHT M
Sbjct: 330 MDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIMRIHTKNM--- 386
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL-VRAAQSCAMNRLIKATNKVE-VDPQALEKLCI 118
KL + V+L+ +A T + GA+L L +A C ++ + E + + LE + +
Sbjct: 387 -KLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETISAEILESMSV 445
Query: 119 TRADFLHAL 127
T+ F AL
Sbjct: 446 TQDHFRTAL 454
Score = 167 (63.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 62/194 (31%), Positives = 96/194 (49%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+ RV IL+ K
Sbjct: 606 MDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNK---- 661
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLI-------KATNK---VEVDP 110
+A DV+L+ L T+ FSGA+L + + A A+ I KA + +++
Sbjct: 662 SPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIEKDIESTKARQESGDTKMED 721
Query: 111 QALEKLC-ITRADFLHALETDIKPAFGSSDESLEHFL-----SRGI-LNWGTPVQECLEA 163
+++ + ITR F A+ + + + E F SRG+ N+ P QE +
Sbjct: 722 DSVDPVPEITRDHFQEAMRSARRSVSDNDIRKYESFAQTLVQSRGLGNNFKFPDQE--SS 779
Query: 164 GRIFIQQSKDTESS 177
G+ QS D S+
Sbjct: 780 GQFNQDQSDDLFSN 793
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
EA N+ II DEID+I R G V +V+QLL+ MDG++ +++V+G TN
Sbjct: 290 EAEKNAP-SIIFIDEIDSIAPKREKTQGE--VERRIVSQLLTLMDGLKSRAHVIVMGATN 346
Query: 339 RRDMIDEALLRPGRLE 354
R + ID AL R GR +
Sbjct: 347 RPNSIDPALRRFGRFD 362
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 187 (70.9 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG + G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 578 VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPA 637
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 638 VLRPGRLD 645
Score = 175 (66.7 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 43/129 (33%), Positives = 74/129 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +++VI TNR + ID AL R GR + +++I +P+ GR++IL+IHT M
Sbjct: 337 MDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM--- 393
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE--VDPQALEKLCI 118
KL +DV+L+++A F GA+L L A + ++ + + +D + L L +
Sbjct: 394 -KLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAV 452
Query: 119 TRADFLHAL 127
T +F A+
Sbjct: 453 TMENFRFAM 461
Score = 174 (66.3 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 44/111 (39%), Positives = 65/111 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R+QI + A +R
Sbjct: 613 MDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFK---ASLRK- 668
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
L+ D++L LA T FSGA+L + + A A+ I+ + E + Q
Sbjct: 669 TPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQ 719
Score = 122 (48.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ DEIDAI R A G V +V+QLL+ MDG++ +++VI TNR + ID AL
Sbjct: 305 ILFIDEIDAIAPKREKAHGE--VEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGAL 362
Query: 348 LRPGRLE 354
R GR +
Sbjct: 363 RRFGRFD 369
Score = 42 (19.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 180 VSVLLEVDKVPTDELSLSNFAAAN 203
VS++L D P D++ ++ N
Sbjct: 74 VSIVLNADNCPNDKIKMNKVVRNN 97
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 187 (70.9 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
++ FDE+D+I KARG + G+ G D V+NQ+L++MDG+ N+ +IG TNR D+ID A
Sbjct: 578 VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPA 637
Query: 347 LLRPGRLE 354
+LRPGRL+
Sbjct: 638 VLRPGRLD 645
Score = 175 (66.7 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 43/129 (33%), Positives = 74/129 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ +++VI TNR + ID AL R GR + +++I +P+ GR++IL+IHT M
Sbjct: 337 MDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM--- 393
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE--VDPQALEKLCI 118
KL +DV+L+++A F GA+L L A + ++ + + +D + L L +
Sbjct: 394 -KLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAV 452
Query: 119 TRADFLHAL 127
T +F A+
Sbjct: 453 TMENFRFAM 461
Score = 174 (66.3 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 44/111 (39%), Positives = 65/111 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP+E R+QI + A +R
Sbjct: 613 MDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFK---ASLRK- 668
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
L+ D++L LA T FSGA+L + + A A+ I+ + E + Q
Sbjct: 669 TPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQ 719
Score = 122 (48.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ DEIDAI R A G V +V+QLL+ MDG++ +++VI TNR + ID AL
Sbjct: 305 ILFIDEIDAIAPKREKAHGE--VEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGAL 362
Query: 348 LRPGRLE 354
R GR +
Sbjct: 363 RRFGRFD 369
Score = 42 (19.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 180 VSVLLEVDKVPTDELSLSNFAAAN 203
VS++L D P D++ ++ N
Sbjct: 74 VSIVLNADNCPNDKIKMNKVVRNN 97
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 183 (69.5 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 51/138 (36%), Positives = 75/138 (54%)
Query: 1 MDGV-ERLNN--ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKM 57
MDG+ ++ +LV+G TNR +D AL RPGR + ++EI +PN R+ ILQ +
Sbjct: 481 MDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQ---KLL 537
Query: 58 RSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKAT-NKVEVDPQALEKL 116
R L + L +LA + GA+L+ L A CA+ R++K N +V L K
Sbjct: 538 RRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVK- 596
Query: 117 CITRADFLHALETDIKPA 134
IT DFL A+ DI+P+
Sbjct: 597 -ITLKDFLQAMN-DIRPS 612
Score = 176 (67.0 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 33/67 (49%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+DA+ RG++ G V D V+ QLL++MDG+E+L ++ ++ TNR D ID+AL
Sbjct: 723 IIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKAL 782
Query: 348 LRPGRLE 354
+RPGR++
Sbjct: 783 MRPGRID 789
Score = 160 (61.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/102 (35%), Positives = 62/102 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E+L ++ ++ TNR D ID+AL+RPGR++ + + LP+ R +I ++ M
Sbjct: 757 MDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSM--- 813
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
++++V+L EL T +SGAE+ + R A A+ I+A
Sbjct: 814 -PVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQA 854
Score = 122 (48.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGV-ERLNN--ILVIGMTNRRDMID 344
II DE+DA+C R G V VV LL+ MDG+ ++ +LV+G TNR +D
Sbjct: 449 IIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALD 506
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 507 AALRRPGRFD 516
Score = 44 (20.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 18 RRDMIDEALLRPGRLELQMEIS-LPNEDGRVQILQIHTAKMRSYKKLADDVNLK 70
+R +++ + LEL +++S L ED QI T++ YK + D + K
Sbjct: 215 QRMAFEQSSMETSSLELSLQLSQLDLED-----TQIPTSRSTPYKPIDDRITNK 263
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 288 (106.4 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 116/376 (30%), Positives = 171/376 (45%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
++ V +LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+
Sbjct: 390 LNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREKILQTLCRKL--- 446
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLCIT 119
KL + LA LT + GA+L L R A C +NR LIK+ + QA
Sbjct: 447 -KLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVNRVLIKSEEQQRKYVQAGGNT--- 502
Query: 120 RADFLHALETDIKPAFGS----SDESLEHFLSRGILNWGTPVQE------CLEAGRIFIQ 169
A+ +ET+I + S E L+ L +L P+ E C+E +
Sbjct: 503 -AEESVGIETEIPVEENTKQLPSKEELQRLLY--LLKKQDPLPEDQLQKLCIEMNDFIVA 559
Query: 170 QSKDTESS---GLVSV----LLEVDKVPT--DELSLSNFAAANKDDFVEDTKHIEVTTGP 220
S S+ G V++ ++ + +EL+++ A E K + +TT
Sbjct: 560 LSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILAPVRNP---EQFKALGLTTPA 616
Query: 221 GRHYIFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIIL 278
G LA P G +LL + A S I VK P N SE +
Sbjct: 617 G----VLLAGPPGC-----GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVF 667
Query: 279 EAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
+ NS +I FDE+DA+C R V VVNQLL++MDG+E + ++ TN
Sbjct: 668 QRARNSAPCVIFFDEVDALCPRRSDRESGASVR--VVNQLLTEMDGLENRQQVFIMAATN 725
Query: 339 RRDMIDEALLRPGRLE 354
R D+ID A+LRPGRL+
Sbjct: 726 RPDIIDPAILRPGRLD 741
Score = 178 (67.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 49/153 (32%), Positives = 82/153 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP + R+ IL+ T K +
Sbjct: 709 MDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTIT-KDGTR 767
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLC 117
L DVNL+E+A + ++GA+L LVR A CA+ + + T K + + ++
Sbjct: 768 PPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQEMALPTTKSKKEKGEIK--- 824
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGI 150
I+R F A +K + D+ + L + +
Sbjct: 825 ISRKHFEEAFRK-VKSSVSKKDQIMYEELRQSL 856
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 182 (69.1 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 48/117 (41%), Positives = 63/117 (53%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A S I VK P N SE + + G NS +I FDEIDA+
Sbjct: 566 GKTLLAKAVANASGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDAL 625
Query: 298 CKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
C R V VVNQLL++MDG+E + ++ TNR D+ID A+LRPGRL+
Sbjct: 626 CPRRSEHESGASVR--VVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLD 680
Score = 178 (67.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 52/154 (33%), Positives = 82/154 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP R IL T K +
Sbjct: 648 MDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNTIT-KGGTK 706
Query: 61 KKLADDVNLKELA--ALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCI 118
+L DV+L+E+A A + F+GA+L LVR A C +N L + + ++ + + +
Sbjct: 707 PQLDSDVSLEEIAHDARCETFTGADLSALVREA--C-VNALRVHLDPAQTHTESAKDIRV 763
Query: 119 TRADFLHALETDIKPAFGSSD----ESLEHFLSR 148
+R F A + ++P+ D E L LSR
Sbjct: 764 SRVHFEDAFKK-VRPSVSKKDQLMYERLRETLSR 796
Score = 171 (65.3 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 43/109 (39%), Positives = 66/109 (60%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+LVIG TNR D +D AL R GR + ++ + +P+E R++IL+ K+R L DD +
Sbjct: 366 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGARMKILKTLCRKIR----LPDDFDF 421
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQ-ALEKL 116
+ LA LT + GA+L L R A A+NR L++ T + ++ P AL +L
Sbjct: 422 RHLARLTPGYVGADLMALCREAAMNAVNRILLEPTTEDQITPTLALARL 470
Score = 37 (18.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 135 FGSSDESLE 143
FG SDE+LE
Sbjct: 229 FGGSDETLE 237
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 186 (70.5 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+DA+ RG++ G V D V+ QLL++MDG+E+L N+ V+ TNR D ID+AL
Sbjct: 723 IIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKAL 782
Query: 348 LRPGRLE 354
+RPGR++
Sbjct: 783 MRPGRID 789
Score = 174 (66.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 39/102 (38%), Positives = 62/102 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E+L N+ V+ TNR D ID+AL+RPGR++ + + LP+ R +IL + M
Sbjct: 757 MDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSM--- 813
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
++++V+L EL T +SGAE+ + + A A+ IKA
Sbjct: 814 -PISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKA 854
Score = 159 (61.0 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 1 MDGVERLNN---ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKM 57
MDG+ + +LV+G TNR +D AL RPGR + ++EI +PN R+ ILQ +
Sbjct: 481 MDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQ---KLL 537
Query: 58 RSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLC 117
R L L LA + GA+L+ L A A+ R+++ + D + +
Sbjct: 538 RRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLP-DSKVAGMVK 596
Query: 118 ITRADFLHALETDIKPA 134
IT DFL + DI+P+
Sbjct: 597 ITLNDFLQGMN-DIRPS 612
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNN---ILVIGMTNRRDMID 344
II DE+DA+C R G + V VV LL+ MDG+ + +LV+G TNR +D
Sbjct: 449 IIFIDELDALCPKR--EGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALD 506
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 507 AALRRPGRFD 516
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 192 (72.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 41/102 (40%), Positives = 63/102 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ L N+ +IG TNR D+ID+A+LR GR++ + IS P+ D R +I IH K+
Sbjct: 750 MDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPH- 808
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
+ D+++ +L+ LT +SGAE+ + R A AM I A
Sbjct: 809 ---SSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDINA 847
Score = 173 (66.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 8 NNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDV 67
+ ++VIG TNR D ID AL RPGR + ++EIS+PN+ GR QIL I +K+ + + + ++
Sbjct: 467 DKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPN-QLTSQEI 525
Query: 68 NLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNK 105
+ +A+ T F GA++E L + A NR IK N+
Sbjct: 526 AM--IASKTHGFVGADIESLCKEASLKCFNR-IKNENQ 560
Score = 168 (64.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 36/79 (45%), Positives = 55/79 (69%)
Query: 276 IILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
I +A NS I+ FDEID + +R +G +G + VV+QLL++MDG++ L N+ +IG
Sbjct: 707 IFKKARQNSP-SILFFDEIDGLAISR--SGEGSGAVERVVSQLLTEMDGIQPLTNVTIIG 763
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D+ID+A+LR GR++
Sbjct: 764 ATNRPDIIDKAILRAGRID 782
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 179 (68.1 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 33/67 (49%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+DA+ RG++ G V D V+ QLL++MDG+E+L ++ ++ TNR D ID+AL
Sbjct: 723 IIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKAL 782
Query: 348 LRPGRLE 354
+RPGR++
Sbjct: 783 MRPGRID 789
Score = 174 (66.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 39/104 (37%), Positives = 63/104 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E+L ++ ++ TNR D ID+AL+RPGR++ + + LP+ R +IL + M
Sbjct: 757 MDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSM--- 813
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATN 104
+++DVNL EL T +SGAE+ + R A A+ I+A +
Sbjct: 814 -PISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQANS 856
Score = 161 (61.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 48/138 (34%), Positives = 72/138 (52%)
Query: 1 MDGVERLNN---ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKM 57
MDG+ + +LV+G TNR +D AL RPGR + ++EI +PN R+ ILQ +
Sbjct: 481 MDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQ---KLL 537
Query: 58 RSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLI-KATNKVEVDPQALEKL 116
+ L +V L +LA + GA+L+ L A A+ R++ K N + L K
Sbjct: 538 QRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPNLSDSKMAGLVK- 596
Query: 117 CITRADFLHALETDIKPA 134
IT DFL + DI+P+
Sbjct: 597 -ITLNDFLQGMN-DIRPS 612
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNN---ILVIGMTNRRDMID 344
II DE+DA+C R G V VV LL+ MDG+ + +LV+G TNR +D
Sbjct: 449 IIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALD 506
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 507 AALRRPGRFD 516
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 234 (87.4 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 51/98 (52%), Positives = 69/98 (70%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGVE+LN ++VIG TNR DMID ALLRPGR + +EI LP++ R++IL+I T +
Sbjct: 702 MDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSI--- 758
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
L+D+VNL E++ LT FSGA+LE L R A ++ R
Sbjct: 759 -PLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRR 795
Score = 178 (67.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ FDEIDAI R + ++G V++ L++MDGVE+LN ++VIG TNR DMID
Sbjct: 666 ILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDN 725
Query: 346 ALLRPGRLE-VSEI 358
ALLRPGR + + EI
Sbjct: 726 ALLRPGRFDKILEI 739
Score = 161 (61.7 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 46/156 (29%), Positives = 85/156 (54%)
Query: 1 MDGV-ERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRS 59
+DG+ R N+++I TNR + ID AL RPGRL+ ++EI +PN+ R+ IL+++ +K+
Sbjct: 420 LDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRLDILKLYCSKL-P 478
Query: 60 YKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR--LIKATNKVEVDPQALEKLC 117
++ L ++A T + GA ++ L R + A ++ L+K N + + + +K
Sbjct: 479 ISPTPSNL-LDQIADETVGYVGANIQFLCRDSAFIAFSKYNLLKYQNNEQNENENEKKYL 537
Query: 118 ITRADFLHALETDIKPAFGSSDESLEHFLSRGILNW 153
I DF +++ + PA E L +S ++W
Sbjct: 538 IEIEDFRESIKNN--PASILKGEHLVENISN--VSW 569
Score = 137 (53.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 38/92 (41%), Positives = 49/92 (53%)
Query: 269 TSEFLCTIILEAGPNS----GLHIIIF-DEIDAICKARGTAGGNTGVHDTVVNQLLSKMD 323
T E L I EA S I++F DEID IC R + N VV Q L+ +D
Sbjct: 365 TEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQN---ESRVVGQFLTLLD 421
Query: 324 GV-ERLNNILVIGMTNRRDMIDEALLRPGRLE 354
G+ R N+++I TNR + ID AL RPGRL+
Sbjct: 422 GIGARKGNLIIIAATNRPNQIDNALRRPGRLD 453
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 198 (74.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 45/102 (44%), Positives = 65/102 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+E L N+LV+ TNR DMID AL+RPGRL+ + + PN + R QI++I KM
Sbjct: 674 LDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKM--- 730
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
K A+DV+L +A T+ SGAE+ L + A AM+ ++A
Sbjct: 731 -KFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEA 771
Score = 169 (64.5 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 41/114 (35%), Positives = 67/114 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++VI TNR + IDEAL RPGRLE ++EI +P++ R+ I+++ +
Sbjct: 407 LDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKL---LLSGV 463
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALE 114
+D L++LA+ T + GA+L +VR A A+ R IK T ++ D L+
Sbjct: 464 PNEINDAQLEDLASRTHAYVGADLAAVVREA---AL-RAIKRTISLQKDTSGLD 513
Score = 166 (63.5 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
+I FDEIDA+ RG + D VV LL+++DG+E L N+LV+ TNR DMID AL
Sbjct: 644 VIFFDEIDALTANRGEDNSS----DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPAL 699
Query: 348 LRPGRLE 354
+RPGRL+
Sbjct: 700 MRPGRLD 706
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 242 SLLQRKWAELSLHQDIDVKPFFFNPKNTSE 271
S L KWA L Q +++ + +P +E
Sbjct: 71 SPLLAKWANLKAFQRVNISQYV-HPLKEAE 99
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 173 (66.0 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 46/117 (39%), Positives = 63/117 (53%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A S I VK P N SE + + +S +I FDE+DA+
Sbjct: 621 GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDAL 680
Query: 298 CKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
C R TG VVNQLL++MDG+E + ++ TNR D+ID A+LRPGRL+
Sbjct: 681 CPRRSDR--ETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLD 735
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 42/100 (42%), Positives = 60/100 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP R+ IL+ T K +
Sbjct: 703 MDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTIT-KNGTR 761
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNR 98
L DVNL+ LAA + +SGA+L LVR A CA+ +
Sbjct: 762 PPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQ 801
Score = 161 (61.7 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 39/103 (37%), Positives = 59/103 (57%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+R L +
Sbjct: 398 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR----LPETFPF 453
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE-VDPQ 111
+ LA LT F GA+L L R A CA++R++ + + DP+
Sbjct: 454 RHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQEQQPTDPE 496
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 173 (66.0 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 46/117 (39%), Positives = 63/117 (53%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A S I VK P N SE + + +S +I FDE+DA+
Sbjct: 626 GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDAL 685
Query: 298 CKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
C R TG VVNQLL++MDG+E + ++ TNR D+ID A+LRPGRL+
Sbjct: 686 CPRRSDR--ETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLD 740
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 42/100 (42%), Positives = 60/100 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP R+ IL+ T K +
Sbjct: 708 MDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTIT-KNGTR 766
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNR 98
L DVNL+ LAA + +SGA+L LVR A CA+ +
Sbjct: 767 PPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQ 806
Score = 161 (61.7 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 39/103 (37%), Positives = 59/103 (57%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+R L +
Sbjct: 398 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR----LPETFPF 453
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE-VDPQ 111
+ LA LT F GA+L L R A CA++R++ + + DP+
Sbjct: 454 RHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQEQQPTDPE 496
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 174 (66.3 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ NN+LV+ TNR + ID AL R GR + ++EI +P+E GR +IL T KM
Sbjct: 655 MDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKM--- 711
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLV-RAAQSC 94
KL DVNL+++A + GA+L L AA C
Sbjct: 712 -KLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQC 745
Score = 162 (62.1 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID++ K R + N D V+NQ+L+++DG+ I +I TNR D++D+AL
Sbjct: 1030 IIFFDEIDSLAKERNS-NTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKAL 1088
Query: 348 LRPGRLE 354
RPGRL+
Sbjct: 1089 TRPGRLD 1095
Score = 158 (60.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 40/113 (35%), Positives = 66/113 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ I +I TNR D++D+AL RPGRL+ + ISLP+ R I + A +++
Sbjct: 1063 IDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFK---AILKN- 1118
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATN--KVEVDPQ 111
L +DV++ ++A T+ FSGA++ L ++A + A+ I N K E + Q
Sbjct: 1119 TPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQ 1171
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II DEID+I R + N + VV+QLL+ MDG+++ NN+LV+ TNR + ID AL
Sbjct: 623 IIFIDEIDSIANKRSKS--NNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPAL 680
Query: 348 LRPGRLE 354
R GR +
Sbjct: 681 RRFGRFD 687
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 174 (66.3 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ NN+LV+ TNR + ID AL R GR + ++EI +P+E GR +IL T KM
Sbjct: 655 MDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKM--- 711
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLV-RAAQSC 94
KL DVNL+++A + GA+L L AA C
Sbjct: 712 -KLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQC 745
Score = 162 (62.1 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID++ K R + N D V+NQ+L+++DG+ I +I TNR D++D+AL
Sbjct: 1030 IIFFDEIDSLAKERNS-NTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKAL 1088
Query: 348 LRPGRLE 354
RPGRL+
Sbjct: 1089 TRPGRLD 1095
Score = 158 (60.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 40/113 (35%), Positives = 66/113 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ I +I TNR D++D+AL RPGRL+ + ISLP+ R I + A +++
Sbjct: 1063 IDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFK---AILKN- 1118
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATN--KVEVDPQ 111
L +DV++ ++A T+ FSGA++ L ++A + A+ I N K E + Q
Sbjct: 1119 TPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQ 1171
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II DEID+I R + N + VV+QLL+ MDG+++ NN+LV+ TNR + ID AL
Sbjct: 623 IIFIDEIDSIANKRSKS--NNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPAL 680
Query: 348 LRPGRLE 354
R GR +
Sbjct: 681 RRFGRFD 687
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 185 (70.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 53/155 (34%), Positives = 83/155 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ I VIG TNR DMID A+LRPGRL+ + I LPN + ++ I++ T +
Sbjct: 661 LDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGT- 719
Query: 61 KKLADDVNLKELAALTK--NFSGAELEGLVRAAQSCAMNRLIKATNKVE------VDPQ- 111
L+ DV+ +E+ K NFSGA+L LVR + A+ R + +++ +D +
Sbjct: 720 -PLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEF 778
Query: 112 -------ALEKLCITRADFLHALETDIKPAFGSSD 139
+ E++ +T +DF AL IKP+ D
Sbjct: 779 EDLSVGVSGEEIIVTMSDFRSALRK-IKPSVSDKD 812
Score = 171 (65.3 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 39/109 (35%), Positives = 65/109 (59%)
Query: 4 VERLNN--ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYK 61
+E+ N +++IG TNR D +D AL R GR + ++ +++PNE R+ IL+ KM
Sbjct: 339 MEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILK----KMSDNL 394
Query: 62 KLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP 110
K+ ++ +LA LT F GA+L+ LV AA +CA+ R+ + ++ P
Sbjct: 395 KIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIKSTP 443
Score = 156 (60.0 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
+I FDE+DA+ R T+ + VVN LL+++DG+ I VIG TNR DMID A+
Sbjct: 629 VIFFDELDALVPRRDTSLSESS--SRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAM 686
Query: 348 LRPGRLEVS 356
LRPGRL+ S
Sbjct: 687 LRPGRLDKS 695
Score = 118 (46.6 bits), Expect = 0.00093, P = 0.00093
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGV--ERLNN--ILVIGMTNRRDMI 343
++ FDEIDAI R G + +V QLL+ MD + E+ N +++IG TNR D +
Sbjct: 301 LVFFDEIDAITPKRD-GGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSL 359
Query: 344 DEALLRPGRLE 354
D AL R GR +
Sbjct: 360 DAALRRAGRFD 370
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 175 (66.7 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 50/134 (37%), Positives = 73/134 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ I+VIG TNR + ID AL RPGR + ++EI +P+ + R +IL AKM S
Sbjct: 359 MDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSE 418
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K + +A+ T + GA+L L R + A+NR + V + PQ K +T
Sbjct: 419 KCQITKEEIASIASKTHGYVGADLTALCRESVMKAINRGLT----VGI-PQTAIK--VTV 471
Query: 121 ADFLHALETDIKPA 134
D HAL +I+P+
Sbjct: 472 DDVYHALP-EIRPS 484
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 41/103 (39%), Positives = 64/103 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L ++++G TN+ ID ALLRPGRL+ + ++ P+ D R+QILQ + K +
Sbjct: 628 IDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKF-NL 686
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKAT 103
+ + V+L++LA LT SGAE+ L + A A+ +AT
Sbjct: 687 QSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENKEAT 729
Score = 149 (57.5 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEIDAI R T + V+ LL+++DGVE L ++++G TN+ ID AL
Sbjct: 595 IIFFDEIDAIAGDRDGDSSTTAASN-VLTSLLNEIDGVEELKGVVIVGATNKPTEIDPAL 653
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 654 LRPGRLD 660
Score = 132 (51.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/67 (47%), Positives = 41/67 (61%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II DEID+I +R T+ + VV QLL+ MDG+ I+VIG TNR + ID AL
Sbjct: 326 IIFMDEIDSIAPSR-TSDDSGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSAL 384
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 385 RRPGRFD 391
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 161 LEAGRIFIQQSKDTESSGLVSVLLEV-DKVPTDELSLS 197
L G + + S D+ S+G+V+ + D V + +++S
Sbjct: 61 LNNGNLVLVSSSDSGSAGVVATVYSSNDIVDKNVITIS 98
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 164 (62.8 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 1 MDGVERLNN---ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKM 57
MDG+ + +LV+G TNR +D AL RPGR + ++EI +PN R+ ILQ +
Sbjct: 475 MDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQ---KLL 531
Query: 58 RSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLC 117
R L + L +LA + GA+L+ L A A+ R+++ + D + +
Sbjct: 532 RRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRKQPNLP-DSKVAGLVK 590
Query: 118 ITRADFLHALETDIKPA 134
IT DFL + DI+P+
Sbjct: 591 ITLKDFLQGMN-DIRPS 606
Score = 159 (61.0 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 57/187 (30%), Positives = 84/187 (44%)
Query: 167 FIQQSKDTESSGLVSVLLEVDKVPTDELS-LSNFAAANKDDFVEDTKHIEVTTGPG-RHY 224
F+Q D S + V ++V V ++ L N K KH E T G +
Sbjct: 596 FLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPP 655
Query: 225 IFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGP 282
L Y P G +++ + A S + +K P N SE I
Sbjct: 656 KGVLLYGPP---G-CSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKAR 711
Query: 283 NSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDM 342
II FDE+DA+ RG++ G V D V+ QLL++MDG+E+L ++ ++ TNR D
Sbjct: 712 AVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDR 771
Query: 343 IDEALLR 349
ID+ LLR
Sbjct: 772 IDKELLR 778
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNN---ILVIGMTNRRDMID 344
II DE+DA+C R G V VV LL+ MDG+ + +LV+G TNR +D
Sbjct: 443 IIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALD 500
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 501 AALRRPGRFD 510
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 164 (62.8 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 43/134 (32%), Positives = 73/134 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ ++VI TNR + +D AL RPGR + ++EI +P+ D R IL ++M S
Sbjct: 374 MDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSD 433
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+ + D +K +A+ T + GA+L L R + + R + T+ +D +L+ +T
Sbjct: 434 RHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGL-GTD-ANIDKFSLK---VTL 488
Query: 121 ADFLHALETDIKPA 134
D A+ DI+P+
Sbjct: 489 KDVESAM-VDIRPS 501
Score = 164 (62.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 40/115 (34%), Positives = 67/115 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L ++++ TNR D ID ALLRPGRL+ + + P+ + R++IL+ T K +
Sbjct: 644 IDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTE 703
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEK 115
+ V+L ELA T+ +SGAE+ V Q + +++ + +V+ + EK
Sbjct: 704 ES---GVDLHELADRTEGYSGAEV---VLLCQEAGLAAIMEDLDVAKVELRHFEK 752
Score = 159 (61.0 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 39/95 (41%), Positives = 53/95 (55%)
Query: 261 PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLL 319
P FN SE I ++ II FDEIDA+ R G +T + V+ LL
Sbjct: 584 PEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRD--GSSTSAANHVLTSLL 641
Query: 320 SKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
+++DGVE L ++++ TNR D ID ALLRPGRL+
Sbjct: 642 NEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLD 676
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 288 IIIFDEIDAICKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEID+I R A ++G V VV LL+ MDG+ ++VI TNR + +D A
Sbjct: 341 IIFIDEIDSIAPNR--ANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPA 398
Query: 347 LLRPGRLE 354
L RPGR +
Sbjct: 399 LRRPGRFD 406
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 39/110 (35%), Positives = 65/110 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGVE + +IG TNR D++D A+LRPGRL+ + + P+ + RV IL+ T K +
Sbjct: 662 MDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKST-KNGTR 720
Query: 61 KKLADDVNLKELAALTK--NFSGAELEGLVRAAQSCAMN-RLIKATNKVE 107
L +D++ E+A L + F+GA+L L+ + A+ R+++ V+
Sbjct: 721 PMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARVLENDESVK 770
Score = 164 (62.8 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 45/117 (38%), Positives = 63/117 (53%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A + I VK P N SE + + +S +I FDEIDA+
Sbjct: 580 GKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
Query: 298 CKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
R + G +VNQLL++MDGVE + +IG TNR D++D A+LRPGRL+
Sbjct: 640 VPKRSHGESSGGAR--LVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLD 694
Score = 158 (60.7 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 36/90 (40%), Positives = 56/90 (62%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+LVIG T+R D +D L R GR E ++ + +P+E R +IL+ K+ LA DV L
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILE-KICKVN----LAGDVTL 425
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRL 99
K++A LT + GA+L+ L+R A A++R+
Sbjct: 426 KQIAKLTPGYVGADLQALIREAAKVAIDRV 455
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 39/110 (35%), Positives = 65/110 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGVE + +IG TNR D++D A+LRPGRL+ + + P+ + RV IL+ T K +
Sbjct: 662 MDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKST-KNGTR 720
Query: 61 KKLADDVNLKELAALTK--NFSGAELEGLVRAAQSCAMN-RLIKATNKVE 107
L +D++ E+A L + F+GA+L L+ + A+ R+++ V+
Sbjct: 721 PMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARVLENDESVK 770
Score = 164 (62.8 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 45/117 (38%), Positives = 63/117 (53%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A + I VK P N SE + + +S +I FDEIDA+
Sbjct: 580 GKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
Query: 298 CKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
R + G +VNQLL++MDGVE + +IG TNR D++D A+LRPGRL+
Sbjct: 640 VPKRSHGESSGGAR--LVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLD 694
Score = 158 (60.7 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 36/90 (40%), Positives = 56/90 (62%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+LVIG T+R D +D L R GR E ++ + +P+E R +IL+ K+ LA DV L
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILE-KICKVN----LAGDVTL 425
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRL 99
K++A LT + GA+L+ L+R A A++R+
Sbjct: 426 KQIAKLTPGYVGADLQALIREAAKVAIDRV 455
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 193 (73.0 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 56/163 (34%), Positives = 85/163 (52%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ + VIG TNR DMID A+LRPGRL+ + I LP + R++IL+ T S
Sbjct: 650 LDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILK--TLVRTSN 707
Query: 61 KKLADDVNLKELAALTK--NFSGAELEGLVRAAQSCAMNRLIKATNKV-EVDPQAL---- 113
L +V+L ++ ++ NFSGA+L LV+ A A+ + K+ E+D
Sbjct: 708 SPLHANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDS 767
Query: 114 ---EKLCITRADFLHALETDIKPAFGSSDESLEHFLSRGILNW 153
+ + IT DF HAL + I+P+ D L++ L W
Sbjct: 768 IGEDDISITAEDFDHALSS-IRPSVSDRDRMRYEKLNKK-LGW 808
Score = 163 (62.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 34/105 (32%), Positives = 65/105 (61%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
++VIG TNR D +D AL R GR + ++ +++PNE+ R+ IL+ T ++ + N
Sbjct: 335 VVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLEN--GEHFNY 392
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALE 114
+EL+ LT + GA+L+ LV AA A+ R+ + ++++ + +++
Sbjct: 393 RELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEESHSVK 437
Score = 158 (60.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 45/117 (38%), Positives = 61/117 (52%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A S I +K P N SE + + S II FDE+DA+
Sbjct: 568 GKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDAL 627
Query: 298 CKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
R T+ + VVN LL+++DG+ + VIG TNR DMID A+LRPGRL+
Sbjct: 628 VPRRDTSMSESS--SRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLD 682
Score = 40 (19.1 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 100 IKATNKVEVDP---QALEKLCITRADFLHALETDIKPA 134
IK + DP + L L IT DF++AL + ++P+
Sbjct: 471 IKKFLNMHPDPLNQEQLAPLAITYQDFVNALPS-VQPS 507
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 193 (73.0 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 56/163 (34%), Positives = 85/163 (52%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ + VIG TNR DMID A+LRPGRL+ + I LP + R++IL+ T S
Sbjct: 650 LDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILK--TLVRTSN 707
Query: 61 KKLADDVNLKELAALTK--NFSGAELEGLVRAAQSCAMNRLIKATNKV-EVDPQAL---- 113
L +V+L ++ ++ NFSGA+L LV+ A A+ + K+ E+D
Sbjct: 708 SPLHANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDS 767
Query: 114 ---EKLCITRADFLHALETDIKPAFGSSDESLEHFLSRGILNW 153
+ + IT DF HAL + I+P+ D L++ L W
Sbjct: 768 IGEDDISITAEDFDHALSS-IRPSVSDRDRMRYEKLNKK-LGW 808
Score = 163 (62.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 34/105 (32%), Positives = 65/105 (61%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
++VIG TNR D +D AL R GR + ++ +++PNE+ R+ IL+ T ++ + N
Sbjct: 335 VVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLEN--GEHFNY 392
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALE 114
+EL+ LT + GA+L+ LV AA A+ R+ + ++++ + +++
Sbjct: 393 RELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEESHSVK 437
Score = 158 (60.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 45/117 (38%), Positives = 61/117 (52%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A S I +K P N SE + + S II FDE+DA+
Sbjct: 568 GKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDAL 627
Query: 298 CKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
R T+ + VVN LL+++DG+ + VIG TNR DMID A+LRPGRL+
Sbjct: 628 VPRRDTSMSESS--SRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLD 682
Score = 40 (19.1 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 100 IKATNKVEVDP---QALEKLCITRADFLHALETDIKPA 134
IK + DP + L L IT DF++AL + ++P+
Sbjct: 471 IKKFLNMHPDPLNQEQLAPLAITYQDFVNALPS-VQPS 507
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 177 (67.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ + + VI TNR D ID ALLRPGR + + + PNE R IL+IH K+
Sbjct: 854 LDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKI--- 910
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIK 101
+ D+ LKELA++TK ++GA++ + R A A+ ++
Sbjct: 911 -PCSSDICLKELASITKGYTGADISLICREAAIAALEESLE 950
Score = 161 (61.7 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 38/105 (36%), Positives = 60/105 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+ R + ++VI TNR D I+ AL RPGRL+ ++EI +P+ R IL I +R
Sbjct: 512 MDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHII---LRGM 568
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLV-RAAQSCAMNRLIKATN 104
+ ++ +++LA T F GA+L L AA C L ++++
Sbjct: 569 RHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQSSS 613
Score = 159 (61.0 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 58/183 (31%), Positives = 88/183 (48%)
Query: 177 SGLVSVLLEVDKVPTDELSLSNFAAANKDDFVE-DTKHIEVTTGPG-RHYIFTLAYSPDV 234
S + V+LEV KV +++ N + VE KH + G R L + P
Sbjct: 709 SAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPP- 767
Query: 235 KRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNP--KNTSEFLCTIILEAGPNSGLHIIIF 291
G +L+ R A + + VK P F+ + + + ++ +A N+ II F
Sbjct: 768 --G-CSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP-SIIFF 823
Query: 292 DEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPG 351
DEID++ RG V D V++QLL ++DG+ + + VI TNR D ID ALLRPG
Sbjct: 824 DEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPG 883
Query: 352 RLE 354
R +
Sbjct: 884 RFD 886
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGM 336
+ + N+ ++ D++DAI AR GG + +V LL+ MDG+ R + ++VI
Sbjct: 469 VFRSASNATPAVVFIDDLDAIAPAR-KEGGEE-LSQRMVATLLNLMDGISRTDGVVVIAA 526
Query: 337 TNRRDMIDEALLRPGRLE 354
TNR D I+ AL RPGRL+
Sbjct: 527 TNRPDSIEPALRRPGRLD 544
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/152 (34%), Positives = 85/152 (55%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E+ + + +I TNR D+ID A+ RPGRL+ + + LP+ + R +IL+ T K+ +
Sbjct: 697 MDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIH 756
Query: 61 KKLADDVNLKELAALTK--NFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCI 118
+ DV+L ++ + +FSGA+L LV+ A + A++R N E D +
Sbjct: 757 Q----DVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFD-NNSTEPDT-------V 804
Query: 119 TRADFLHALETDIKPAFGSSDESLEHFLSRGI 150
T DF+ AL + IKP+ DE + L+ I
Sbjct: 805 TMEDFIFAL-SKIKPSVSRKDELMYDKLNNDI 835
Score = 171 (65.3 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 45/118 (38%), Positives = 62/118 (52%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A I VK P N SE + + S +I FDE DA+
Sbjct: 612 GKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDAL 671
Query: 298 CKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
RG GG + VVNQLL++MDG+E+ + + +I TNR D+ID A+ RPGRL+
Sbjct: 672 APKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLD 729
Score = 145 (56.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 31/91 (34%), Positives = 60/91 (65%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
+++VIG TNR + +D AL GR + ++ + +P++ R +IL++ T+KMR L ++ +
Sbjct: 402 HVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMR----LENNFD 457
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAMNRL 99
+E+A LT + GA++ LV+ A + ++NR+
Sbjct: 458 YEEIATLTPGYVGADINLLVKEAATNSVNRI 488
Score = 52 (23.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 66 DVNL--KELAA------LTKNFSGAELEGLVRAAQSCAMNRLIKAT----NKVEVDPQAL 113
D+NL KE A T N +GA ++ + +N + +T +K ++P+ L
Sbjct: 472 DINLLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKL 531
Query: 114 EKLCITRADFLHALETDIKPA 134
L I DF AL+ + PA
Sbjct: 532 NSLYIEMIDFKKALKK-VVPA 551
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 162 (62.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 1 MDGVERLNN---ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKM 57
MDG+ + +LV+G TNR +D AL RPGR + ++EI +PN R+ ILQ +
Sbjct: 472 MDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQ---KLL 528
Query: 58 RSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLC 117
R L + L +LA + GA+L+ L A A+ R+++ + D + +
Sbjct: 529 RRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRRQPNLP-DSKMAGLVK 587
Query: 118 ITRADFLHALETDIKPA 134
IT DFL + DI+P+
Sbjct: 588 ITLKDFLQGMN-DIRPS 603
Score = 150 (57.9 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 55/183 (30%), Positives = 81/183 (44%)
Query: 167 FIQQSKDTESSGLVSVLLEVDKVPTDELS-LSNFAAANKDDFVEDTKHIEVTTGPG-RHY 224
F+Q D S + V ++V V ++ L N K KH E T G +
Sbjct: 593 FLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPP 652
Query: 225 IFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGP 282
L Y P G +++ + A S + +K P N SE I
Sbjct: 653 KGVLLYGPP---G-CSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKAR 708
Query: 283 NSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDM 342
II FDE+DA+ RG++ G V D V+ QLL++MDG+E+L N+ ++ TNR D
Sbjct: 709 AVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDR 768
Query: 343 IDE 345
ID+
Sbjct: 769 IDK 771
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNN---ILVIGMTNRRDMID 344
II DE+DA+C R G V VV LL+ MDG+ + +LV+G TNR +D
Sbjct: 440 IIFIDELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALD 497
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 498 AALRRPGRFD 507
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 255 (94.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 105/358 (29%), Positives = 168/358 (46%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+LVIG TNR D +D AL R GR + ++ +++P++D R +IL+ M KL+ D +
Sbjct: 315 VLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRT----MAKGLKLSGDFDF 370
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITRADFLHALET 129
++LA T + GA+L+ L AA A+ R+ E+ P L KL + + L++
Sbjct: 371 RQLAKQTPGYVGADLKALTAAAGIIAIKRIFN-----EISP--LNKLDLNSDPRFNELDS 423
Query: 130 DIKPAFGSSDE-SLEH--FLSRGILNWGTPVQ-ECLEAGRI----FIQQSKDTESSGLVS 181
D+ A S+D L+H + R + P+ E LE I FI+ + S
Sbjct: 424 DM--ALDSNDSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKRE 481
Query: 182 VLLEVDKVPTDEL-SLSNFAAANKDDFVEDTKHIEVTTGPGRHY-IFTLAYSPDVKRGFI 239
V V + + +L + + V+ K E+ G L + P G
Sbjct: 482 GFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPP---G-C 537
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK--NTSEFLCTIILEAGPNSGLHIIIFDEIDA 296
G +LL + A S I ++ P N + + + L A +S +I FDE+DA
Sbjct: 538 GKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPC-VIFFDELDA 596
Query: 297 ICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
+ R + VVN LL+++DG+ + + VI TNR D+ID A+LRPGRL+
Sbjct: 597 MVPRRDDSLSEAS--SRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLD 652
Score = 195 (73.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 55/145 (37%), Positives = 82/145 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ + + VI TNR D+ID A+LRPGRL+ + + LP+ RV+IL+ T +
Sbjct: 620 LDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQT--- 676
Query: 61 KKLADDVNLKELAALTK--NFSGAELEGLVRAAQSCAMNRLIKA---TNKVEVDPQ-ALE 114
L ++VNL L + NFSGA+L LVR A A+ + A +N+ E+ ALE
Sbjct: 677 -PLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALE 735
Query: 115 KLCITRADFLHALETDIKPAFGSSD 139
+ +T ADF A + +IKP+ D
Sbjct: 736 PIRVTNADFELAFK-NIKPSVSDRD 759
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 160 (61.4 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 1 MDGVERLNN---ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKM 57
MDG+ + +LV+G TNR +D AL RPGR + ++EI +PN R+ ILQ +
Sbjct: 481 MDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQ---KLL 537
Query: 58 RSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLC 117
R L L LA + GA+L+ L A A+ R+++ + D + +
Sbjct: 538 RRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRRVLRKQPNLP-DSKVAGMVK 596
Query: 118 ITRADFLHALETDIKPA 134
IT DFL + DI+P+
Sbjct: 597 ITLNDFLQGMN-DIRPS 612
Score = 150 (57.9 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+DA+ RG++ G V D V+ QLL++MDG+E+L N+ V+ TNR D ID+ +
Sbjct: 723 IIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKII 782
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNN---ILVIGMTNRRDMID 344
II DE+DA+C R G + V VV LL+ MDG+ + +LV+G TNR +D
Sbjct: 449 IIFIDELDALCPKR--EGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALD 506
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 507 AALRRPGRFD 516
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 48/135 (35%), Positives = 69/135 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG ER N+ VIG TNR D++D A LRPGR + + LPN D R IL+ K
Sbjct: 656 LDGGER-RNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARK---- 710
Query: 61 KKLADDVNLKELAALT-KNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCIT 119
K + V+L +A + FSGA+L LV+ A A+ +I ++ E D + + I
Sbjct: 711 KPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIK 770
Query: 120 RADFLHALETDIKPA 134
F AL + P+
Sbjct: 771 TRHFEQALSL-VSPS 784
Score = 157 (60.3 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+LVIG TNR D +D AL R GR E ++ ++ P+ED R +IL + K+R L +
Sbjct: 380 VLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLR----LEGPFDK 435
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRLI 100
K +A LT F GA+LE + A A+ R++
Sbjct: 436 KRIARLTPGFVGADLESVAYLAGRKAIKRIL 466
Score = 151 (58.2 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
+I FDE+DA+ +RG G V + ++NQ L ++DG ER N+ VIG TNR D++D A
Sbjct: 624 VIFFDEVDALTTSRGKEGA--WVVERLLNQFLVELDGGER-RNVYVIGATNRPDVVDPAF 680
Query: 348 LRPGR 352
LRPGR
Sbjct: 681 LRPGR 685
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 206 (77.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 46/103 (44%), Positives = 65/103 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E ILV+ TNR ID AL+RPGR +L + + P+ + R +ILQ+HT M
Sbjct: 418 MDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMT-- 475
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKAT 103
L DDV+L+++A T F+GAELEGL R + + ++ I AT
Sbjct: 476 --LGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAAT 516
Score = 156 (60.0 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 36/89 (40%), Positives = 53/89 (59%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
++V+ TNR D ID AL R GR + +E+S PNE+ R++ILQ++T K+ L V+L
Sbjct: 165 VVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVN----LDPSVDL 220
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNR 98
+ +A + GA+LE L R A A R
Sbjct: 221 QAIAISCNGYVGADLEALCREATISASKR 249
Score = 137 (53.3 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 288 IIIFDEIDAI-CKARGTAGGNTG-VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II FDE D + CK + N+ V + +++ LL++MDG+E ILV+ TNR ID
Sbjct: 382 IIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDA 441
Query: 346 ALLRPGRLEV 355
AL+RPGR ++
Sbjct: 442 ALMRPGRFDL 451
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 222 (83.2 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 52/142 (36%), Positives = 82/142 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDGVE + ++ TNR D+ID A+LRPGRL+ + + P + R +IL+ T K
Sbjct: 792 MDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKA-TTKNGKR 850
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
LADDV+L E+AA T+ ++GA+L GLV+ A +M L ++ N + + L+ LC+
Sbjct: 851 PVLADDVDLDEIAAQTEGYTGADLAGLVKQA---SMFSLRQSLNNGDTN---LDDLCVRS 904
Query: 121 ADFLHALETDIKPAFGSSDESL 142
F AL+ ++P+ D +
Sbjct: 905 QHFQEALQ-QLRPSVNEQDRKI 925
Score = 176 (67.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 47/119 (39%), Positives = 64/119 (53%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +LL + A + I VK P N SE + NS +I FDE D++
Sbjct: 708 GKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSL 767
Query: 298 CKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
C R G G N+G +VNQLL++MDGVE + ++ TNR D+ID A+LRPGRL+
Sbjct: 768 CPKRSDGGDGNNSGTR--IVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLD 824
Score = 117 (46.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
+++VI T R D++D L R GR + ++ I +P+ R +IL+I + KL N
Sbjct: 389 SVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDPKL----N 444
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++A LT + GA+L LV A S A+ R
Sbjct: 445 YDKIAELTPGYVGADLMALVSRAASVAVKR 474
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 42/102 (41%), Positives = 62/102 (60%)
Query: 8 NNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDV 67
+N++++ TNR D++D+ALLRPGRL+ + I P+E R+ IL++ T M + DV
Sbjct: 622 SNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNM----PVGPDV 677
Query: 68 NLKELAALTKNFSGAELEGLVRAAQSCAM--NRLIKATNKVE 107
+L+ LAA T FSGA+L L + A A+ N L T K E
Sbjct: 678 SLENLAAETCLFSGADLGNLCKEAALLALQENGLEATTVKQE 719
Score = 158 (60.7 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 47/134 (35%), Positives = 72/134 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++V+G TNR D +D AL RPGR + ++ I P R ILQ+ T+KM
Sbjct: 331 LDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKM--- 387
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
++ V+L LA +T + GA+L L R A AM+ L+ + K + +P I
Sbjct: 388 -PISSQVDLSLLAEMTVGYVGADLTALCREA---AMHALLHS-GKNQDNP------LIDE 436
Query: 121 ADFLHALETDIKPA 134
DFL A + I+P+
Sbjct: 437 IDFLEAFKK-IQPS 449
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 266 PKNTSEFLCTIILEAGPNSGLH--IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMD 323
P T E + + A +G ++ DE+DA+C RG G + VV Q+L+ +D
Sbjct: 275 PGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRG--GPHQAPESRVVAQVLTLLD 332
Query: 324 GVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
G+ ++V+G TNR D +D AL RPGR +
Sbjct: 333 GISGDREVVVVGSTNRPDALDPALRRPGRFD 363
Score = 89 (36.4 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 14/26 (53%), Positives = 23/26 (88%)
Query: 329 NNILVIGMTNRRDMIDEALLRPGRLE 354
+N++++ TNR D++D+ALLRPGRL+
Sbjct: 622 SNVMIVAATNRPDVLDDALLRPGRLD 647
Score = 72 (30.4 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 264 FNP--KNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSK 321
F+P ++ + L + +A N+ ++ DEID+I +R + V + V++ LL++
Sbjct: 537 FSPFVGDSEKILSQVFQQARANTPA-VVFLDEIDSILGSRSISKTGCNVQERVLSVLLNE 595
Query: 322 MDGV 325
+DGV
Sbjct: 596 LDGV 599
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 154 (59.3 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 46/117 (39%), Positives = 60/117 (51%)
Query: 240 GFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDAI 297
G +L+ + A S I +K P N SE+ + +S I+ FDE+DA+
Sbjct: 551 GKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSSAPCILFFDELDAL 610
Query: 298 CKARG-TAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRPGRL 353
R T G T VVN LL+++DGV I VIG TNR D IDEA+ RPGRL
Sbjct: 611 VPTRDFTMSGATS---RVVNALLTELDGVGDRQGIYVIGATNRPDSIDEAIRRPGRL 664
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 49/149 (32%), Positives = 74/149 (49%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQ-IHTAKMRS 59
+DGV I VIG TNR D IDEA+ RPGRL + + LP + R IL+ I+ +
Sbjct: 633 LDGVGDRQGIYVIGATNRPDSIDEAIRRPGRLGTDIYVGLPTPEDRFDILRTIYETTVPG 692
Query: 60 YKKLADDVNLKELAALTKN-----FSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALE 114
+ A D K + + ++ F+GA+L L+ AA M R V+ D E
Sbjct: 693 GR--APDAVRKTIERVARDPRCGKFTGADLRQLLTAASEACMIR-------VQDD----E 739
Query: 115 KLCITRADFLHALETDIKPAFGSSDESLE 143
I+ D+ AL+ ++KP+ D+ +E
Sbjct: 740 APMISEEDWERALD-EVKPSVKDIDKYME 767
Score = 124 (48.7 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
N++VI TNR D I+ + R R + ++E+S+P+E R IL+ T K+L+DDV+
Sbjct: 337 NVVVIAATNRPDSIEPTVRR--RFQ-ELEMSMPDEAARESILRTMTRN----KRLSDDVD 389
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAM 96
LA LT + GA+L V A S AM
Sbjct: 390 FTALARLTPGYVGADLATAVDFAASEAM 417
Score = 40 (19.1 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 68 NLKELAALTKNFSGAELEGL 87
++KE AA+ + F+G +LE +
Sbjct: 180 SVKEAAAVPEVFNGPKLEDM 199
Score = 37 (18.1 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 147 SRGILNWGTP 156
S GIL WG P
Sbjct: 539 SAGILLWGPP 548
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 218 (81.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 49/118 (41%), Positives = 77/118 (65%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + ++ +IG TNR D++D A+LRPGR + +E+ P+E GR++IL+IHT KM
Sbjct: 301 MDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMN-- 358
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP--QALEKL 116
LA+DVNL+E+A +T+ GAEL+ + A MN + + + V +D +A+EK+
Sbjct: 359 --LAEDVNLEEIAKMTEGCVGAELKAICTEA---GMNAIRELRDYVTMDDFRKAVEKI 411
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 288 IIIFDEIDAICKARGTA--GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R A GG+ V T++ QLL++MDG + ++ +IG TNR D++D
Sbjct: 266 IIFIDEIDAIAAKRTDALTGGDREVQRTLM-QLLAEMDGFDARGDVKIIGATNRPDILDP 324
Query: 346 ALLRPGRLE 354
A+LRPGR +
Sbjct: 325 AILRPGRFD 333
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 157 (60.3 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 47/134 (35%), Positives = 73/134 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG ++V+G TNR D +D AL RPGR + ++ I P R +ILQ+ T+KM
Sbjct: 329 LDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKM--- 385
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
++ V+L LA +T + GA+L L R A AM+ L+ + K + +P I
Sbjct: 386 -PISSHVDLGLLAEMTVGYVGADLTALCREA---AMHALLHS-EKNQDNP------VIDE 434
Query: 121 ADFLHALETDIKPA 134
DFL A + +I+P+
Sbjct: 435 IDFLEAFK-NIQPS 447
Score = 156 (60.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 42/101 (41%), Positives = 59/101 (58%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
++++I TNR D++D ALLRPGRL+ + I P+ GR+ IL++ T M + DV+
Sbjct: 621 SVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTM----PIGPDVS 676
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAM--NRLIKATNKVE 107
L+ LAA T FSGA+L L A A+ N L T K E
Sbjct: 677 LENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQE 717
Score = 127 (49.8 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 285 GLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
G ++ DE+DA+C RG+ + VV Q+L+ +DG ++V+G TNR D +D
Sbjct: 296 GPSLLFLDEMDALCPQRGSRAPES----RVVAQVLTLLDGASGDREVVVVGATNRPDALD 351
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 352 PALRRPGRFD 361
Score = 82 (33.9 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 320 SKMDGVERLN-NILVIGMTNRRDMIDEALLRPGRLE 354
S+ + E N ++++I TNR D++D ALLRPGRL+
Sbjct: 610 SQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLD 645
Score = 72 (30.4 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 264 FNP-KNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKM 322
F+P SE + + I S I+ DEID+I AR + V + V++ LL+++
Sbjct: 535 FSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNEL 594
Query: 323 DGV 325
DGV
Sbjct: 595 DGV 597
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 162 (62.1 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 44/138 (31%), Positives = 75/138 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++V+G TNR D +D AL RPGR + ++ I P R IL + T+KM
Sbjct: 324 LDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKM--- 380
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP----QALEKL 116
++ ++L LA +T + GA+L L R A +CA+ + K N +++ +A +K
Sbjct: 381 -PISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKNEKNQNNPKIEETDFLEAFKK- 438
Query: 117 CITRADFLHALE-TDIKP 133
+ + F ++ TDI+P
Sbjct: 439 -VQPSSFRSSIGLTDIRP 455
Score = 155 (59.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 40/108 (37%), Positives = 66/108 (61%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
+++++ TNR D++D+ALLRPGRL+ + + P+ +GR+ IL++ T M + +V+
Sbjct: 616 SVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNM----PIGLNVS 671
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAM--NRLIKATNKVEVDPQALE 114
L+ LAA T FSGA+L L + A A+ N L T + E +AL+
Sbjct: 672 LENLAAETCYFSGADLRNLCKEAALFALQENGLEATTVEQEHFTEALK 719
Score = 137 (53.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 285 GLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
G ++ DE+DA+C RG G VV Q+L+ +DG+ ++V+G TNR D +D
Sbjct: 289 GPSLLFLDEVDALCPRRG--GPQRAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELD 346
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 347 PALRRPGRFD 356
Score = 80 (33.2 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 13/25 (52%), Positives = 22/25 (88%)
Query: 330 NILVIGMTNRRDMIDEALLRPGRLE 354
+++++ TNR D++D+ALLRPGRL+
Sbjct: 616 SVMIVVATNRPDVLDDALLRPGRLD 640
Score = 68 (29.0 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 264 FNP--KNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSK 321
F+P ++ + L + +A N+ ++ DEID++ +R + V++ LL++
Sbjct: 530 FSPFVGDSEKVLSQVFRQARANTPA-LVFLDEIDSVLGSRSVGSSGCDARERVLSVLLNE 588
Query: 322 MDGV 325
+DGV
Sbjct: 589 LDGV 592
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 192 (72.6 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 40/102 (39%), Positives = 69/102 (67%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L N+ ++ TNR DMID+ALLRPGR++ + + LP + R +IL+I K+R+
Sbjct: 668 LDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREILKI---KLRAM 724
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
+++DV++++L LT+ +SGAE++ + A A+ + +A
Sbjct: 725 P-ISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEA 765
Score = 172 (65.6 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 288 IIIFDEIDAICKARGTAGGNTG---VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
I+ FDEIDAI R G++ V + V+ QLL+++DGVE L N+ ++ TNR DMID
Sbjct: 631 IVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMID 690
Query: 345 EALLRPGRLE 354
+ALLRPGR++
Sbjct: 691 KALLRPGRID 700
Score = 96 (38.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 21/80 (26%), Positives = 47/80 (58%)
Query: 12 VIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKE 71
V+ +++ D + ++ R GRL+ ++E+ P+ R++I++ ++S + D ++
Sbjct: 420 VLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVR---CLIKSVEHQLSDEEVEH 476
Query: 72 LAALTKNFSGAELEGLVRAA 91
+A++T + GA+L LV AA
Sbjct: 477 VASITHGYVGADLANLVYAA 496
Score = 39 (18.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 32 LELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAAL 75
LE ++ G VQ+++I++ ++ Y K + K L A+
Sbjct: 321 LEAMCAVAEERSQGHVQLIRINSGEV--YSKFLGETEQK-LGAI 361
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 168 (64.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 42/101 (41%), Positives = 62/101 (61%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
N++++ TNR D++D+ALLRPGRL+ + I P+E GR+ IL++ T M + DV+
Sbjct: 657 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNM----PMGPDVS 712
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAM--NRLIKATNKVE 107
L+ +AA T FSGA+L L + A A+ N L T K E
Sbjct: 713 LENIAAETCFFSGADLGNLCKEAALLALQENGLEATTVKQE 753
Score = 148 (57.2 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 45/138 (32%), Positives = 70/138 (50%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ +++V+ TNR D +D AL RPGR + ++ I P R ILQ+ T+KM
Sbjct: 365 LDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKM--- 421
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP----QALEKL 116
++ V+L LA +T + GA+L L R A A+ K + +D +A +K
Sbjct: 422 -PISSQVDLSLLAEMTVGYVGADLTALCREAALHALLHSEKNKDNPAIDETDFFEAFKK- 479
Query: 117 CITRADFLHALET-DIKP 133
I + F + DIKP
Sbjct: 480 -IQPSSFRSVIGLMDIKP 496
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 285 GLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
G ++ DE+DA+C RG G + V Q+L+ +DG+ +++V+ TNR D +D
Sbjct: 330 GPTLLFLDEVDALCPRRG--GAHRAPESRAVAQVLTLLDGIRGDRDVVVVASTNRPDALD 387
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 388 PALRRPGRFD 397
Score = 88 (36.0 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 14/25 (56%), Positives = 22/25 (88%)
Query: 330 NILVIGMTNRRDMIDEALLRPGRLE 354
N++++ TNR D++D+ALLRPGRL+
Sbjct: 657 NVMIVAATNRPDVLDDALLRPGRLD 681
Score = 72 (30.4 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 264 FNP--KNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSK 321
F+P ++ + L + +A N+ I+ DEID+I +R + V + V++ LL++
Sbjct: 571 FSPFVGDSEKVLSQVFRQARANTPA-IVFLDEIDSILGSRSISKTECNVQERVLSVLLNE 629
Query: 322 MDGV 325
+DGV
Sbjct: 630 LDGV 633
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 42/101 (41%), Positives = 62/101 (61%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
N++++ TNR D++D+ALLRPGRL+ + I P+E GR+ IL++ T M + DV+
Sbjct: 615 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNM----PMGPDVS 670
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAM--NRLIKATNKVE 107
L+ +AA T FSGA+L L + A A+ N L T K E
Sbjct: 671 LENIAAETCFFSGADLGNLCKEAALLALQENGLEATTVKQE 711
Score = 148 (57.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 45/138 (32%), Positives = 70/138 (50%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ +++V+ TNR D +D AL RPGR + ++ I P R ILQ+ T+KM
Sbjct: 321 LDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKM--- 377
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP----QALEKL 116
++ V+L LA +T + GA+L L R A A+ K + +D +A +K
Sbjct: 378 -PISSQVDLSLLAEMTVGYVGADLTALCREAALHALLHSEKNKDNPAIDETDFFEAFKK- 435
Query: 117 CITRADFLHALET-DIKP 133
I + F + DIKP
Sbjct: 436 -IQPSSFRSVIGLMDIKP 452
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 285 GLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
G ++ DE+DA+C RG G + V Q+L+ +DG+ +++V+ TNR D +D
Sbjct: 286 GPTLLFLDEVDALCPRRG--GAHRAPESRAVAQVLTLLDGIRGDRDVVVVASTNRPDALD 343
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 344 PALRRPGRFD 353
Score = 88 (36.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 14/25 (56%), Positives = 22/25 (88%)
Query: 330 NILVIGMTNRRDMIDEALLRPGRLE 354
N++++ TNR D++D+ALLRPGRL+
Sbjct: 615 NVMIVAATNRPDVLDDALLRPGRLD 639
Score = 68 (29.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGV 325
I+ DEID+I +R + V + V++ LL+++DGV
Sbjct: 554 IVFLDEIDSILGSRSISKTECNVQERVLSVLLNELDGV 591
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 175 (66.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 33/69 (47%), Positives = 50/69 (72%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGV--ERLNNILVIGMTNRRDMIDE 345
+I FDE+D++ RG G + GV D +V+QLL+++DG+ E + + V+G TNR D++DE
Sbjct: 910 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDE 969
Query: 346 ALLRPGRLE 354
ALLRPGR +
Sbjct: 970 ALLRPGRFD 978
Score = 147 (56.8 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 1 MDGV--ERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGR-VQILQIHTAKM 57
+DG+ E + + V+G TNR D++DEALLRPGR + + + + + D + +IL+ T K
Sbjct: 944 LDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKF 1003
Query: 58 RSYKKLADDVNLKELAALTK-NFSGAELEGLVRAAQSCAMNRLIKATNKVE 107
KL D+VNL+++AA F+GA+ L +N + + N+V+
Sbjct: 1004 ----KLDDNVNLEQVAAKCSFTFTGADFYAL---CSDSMLNAMTRVANEVD 1047
Score = 85 (35.0 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 24/120 (20%), Positives = 61/120 (50%)
Query: 2 DGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQ--IHTAKMRS 59
D ++ N++++ N D +++ L ++ +E ++P+E+ R++I + I+ K ++
Sbjct: 654 DYLKTYRNLVIVMSCNDYDKLNDNL--KSIIKFTIEFTVPSENERLEIFKFLINNEKNKT 711
Query: 60 YKK--------LADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
+ K + D+N K LA + + +L +++ ++ A+ RL K + ++ Q
Sbjct: 712 FTKDINSYPFTIRKDINFKNLALQSAGLTPRDLISIIKKSKKLAIKRLTKLSKDSQISIQ 771
Score = 37 (18.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 63 LADDVNLKELAALTKNFSGAELEGLVRAAQSC 94
LA +NLK LT G LVR SC
Sbjct: 542 LASKINLKTSILLTSMSRGIGKTTLVR--NSC 571
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 175 (66.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 33/69 (47%), Positives = 50/69 (72%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGV--ERLNNILVIGMTNRRDMIDE 345
+I FDE+D++ RG G + GV D +V+QLL+++DG+ E + + V+G TNR D++DE
Sbjct: 910 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDE 969
Query: 346 ALLRPGRLE 354
ALLRPGR +
Sbjct: 970 ALLRPGRFD 978
Score = 147 (56.8 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 1 MDGV--ERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGR-VQILQIHTAKM 57
+DG+ E + + V+G TNR D++DEALLRPGR + + + + + D + +IL+ T K
Sbjct: 944 LDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKF 1003
Query: 58 RSYKKLADDVNLKELAALTK-NFSGAELEGLVRAAQSCAMNRLIKATNKVE 107
KL D+VNL+++AA F+GA+ L +N + + N+V+
Sbjct: 1004 ----KLDDNVNLEQVAAKCSFTFTGADFYAL---CSDSMLNAMTRVANEVD 1047
Score = 85 (35.0 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 24/120 (20%), Positives = 61/120 (50%)
Query: 2 DGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQ--IHTAKMRS 59
D ++ N++++ N D +++ L ++ +E ++P+E+ R++I + I+ K ++
Sbjct: 654 DYLKTYRNLVIVMSCNDYDKLNDNL--KSIIKFTIEFTVPSENERLEIFKFLINNEKNKT 711
Query: 60 YKK--------LADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQ 111
+ K + D+N K LA + + +L +++ ++ A+ RL K + ++ Q
Sbjct: 712 FTKDINSYPFTIRKDINFKNLALQSAGLTPRDLISIIKKSKKLAIKRLTKLSKDSQISIQ 771
Score = 37 (18.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 63 LADDVNLKELAALTKNFSGAELEGLVRAAQSC 94
LA +NLK LT G LVR SC
Sbjct: 542 LASKINLKTSILLTSMSRGIGKTTLVR--NSC 571
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 184 (69.8 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ +RG +G + GV D VV+QLL+++DG+ ++ VIG TNR D++D AL
Sbjct: 797 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 856
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 857 LRPGRFD 863
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 43/144 (29%), Positives = 73/144 (50%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D ALLRPGR + + + +ED R L++ +A R +
Sbjct: 831 LDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGA-SED-RASQLRVLSAITRKF 888
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K A + L +GA+L L A A+ R ++ + ++P++ L +T
Sbjct: 889 KLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEE-GLEPRS-SALLLTM 946
Query: 121 ADFLHALETDIKPAFGSSDESLEH 144
D L A ++P+ S E L +
Sbjct: 947 EDLLQAAAR-LQPSV-SEQELLRY 968
Score = 73 (30.8 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 2 DGVERLNNILVIGMTNR-RDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
D + R ++V+ T+R +D+ + +R ++E+ + +E R+ +LQ TA +
Sbjct: 559 DPLSRCPPLMVVATTSRVQDLPTD--VRTA-FPHELEVPVLSESQRLSVLQALTAHL--- 612
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
L +VNL +LA F +L L+ A A R IKA
Sbjct: 613 -PLGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTR-IKA 652
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 184 (69.8 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ +RG +G + GV D VV+QLL+++DG+ ++ VIG TNR D++D AL
Sbjct: 797 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 856
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 857 LRPGRFD 863
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 43/144 (29%), Positives = 73/144 (50%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D ALLRPGR + + + +ED R L++ +A R +
Sbjct: 831 LDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGA-SED-RASQLRVLSAITRKF 888
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K A + L +GA+L L A A+ R ++ + ++P++ L +T
Sbjct: 889 KLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEE-GLEPRS-SALLLTM 946
Query: 121 ADFLHALETDIKPAFGSSDESLEH 144
D L A ++P+ S E L +
Sbjct: 947 EDLLQAAAR-LQPSV-SEQELLRY 968
Score = 73 (30.8 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 2 DGVERLNNILVIGMTNR-RDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
D + R ++V+ T+R +D+ + +R ++E+ + +E R+ +LQ TA +
Sbjct: 559 DPLSRCPPLMVVATTSRVQDLPTD--VRTA-FPHELEVPVLSESQRLSVLQALTAHL--- 612
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA 102
L +VNL +LA F +L L+ A A R IKA
Sbjct: 613 -PLGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTR-IKA 652
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 207 (77.9 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 62/187 (33%), Positives = 101/187 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + ++V+ TNR D++D ALLRPGR + Q+ + P+ GRV+ILQ+H+ R
Sbjct: 392 MDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHS---RG- 447
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K L DV+ ++A T F+GA+L+ L+ A A R +K +K E+ ALE++ I
Sbjct: 448 KALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEIS-DALERI-IAG 505
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECL-----EAGRI-FIQQSKDT 174
+ +A+ ++ K + E+ H L ++ PV + +AG + F S++
Sbjct: 506 PEKKNAVVSEEKKRLVAYHEA-GHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 564
Query: 175 ESSGLVS 181
SGL S
Sbjct: 565 LESGLYS 571
Score = 157 (60.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG GG + +NQLL++MDG + ++V+ TNR D++D A
Sbjct: 357 IVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSA 416
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 417 LLRPGRFD 424
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 139 (54.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
+I FDEID+I R V + V+ QLL+++DG++ N++++ TNR D+ID AL
Sbjct: 931 VIFFDEIDSIAVNRNN--NQNFVSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPAL 988
Query: 348 LRPGRLE 354
+RPGR +
Sbjct: 989 MRPGRFD 995
Score = 122 (48.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 28/88 (31%), Positives = 51/88 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ + ++IG TN + ID AL R GR + ++E++LPN R+ I Q K+
Sbjct: 588 MDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQ---KKLNLI 644
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLV 88
K + +LA L ++F+ +++ L+
Sbjct: 645 KHNIGKKKIHKLADLCQSFTCSDINSLI 672
Score = 119 (46.9 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQ-------IH 53
+DG++ N++++ TNR D+ID AL+RPGR + + + LPN R IL+ IH
Sbjct: 963 IDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILKKNLKFFKIH 1022
Query: 54 TAKMRSYKKLADDVNLKEL 72
K+ +D+N E+
Sbjct: 1023 NLIEYDKKETINDLNHNEI 1041
Score = 78 (32.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 72 LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
LA TK +SGAE+ + R A CA+ + +K N ++++P+ K+
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRN-IKINPKIKIKI 1156
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 139 (54.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
+I FDEID+I R V + V+ QLL+++DG++ N++++ TNR D+ID AL
Sbjct: 931 VIFFDEIDSIAVNRNN--NQNFVSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPAL 988
Query: 348 LRPGRLE 354
+RPGR +
Sbjct: 989 MRPGRFD 995
Score = 122 (48.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 28/88 (31%), Positives = 51/88 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+++ + ++IG TN + ID AL R GR + ++E++LPN R+ I Q K+
Sbjct: 588 MDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQ---KKLNLI 644
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLV 88
K + +LA L ++F+ +++ L+
Sbjct: 645 KHNIGKKKIHKLADLCQSFTCSDINSLI 672
Score = 119 (46.9 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQ-------IH 53
+DG++ N++++ TNR D+ID AL+RPGR + + + LPN R IL+ IH
Sbjct: 963 IDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILKKNLKFFKIH 1022
Query: 54 TAKMRSYKKLADDVNLKEL 72
K+ +D+N E+
Sbjct: 1023 NLIEYDKKETINDLNHNEI 1041
Score = 78 (32.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 72 LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
LA TK +SGAE+ + R A CA+ + +K N ++++P+ K+
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRN-IKINPKIKIKI 1156
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/187 (32%), Positives = 102/187 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + ++V+ TNR D++D ALLRPGR + Q+ + P+ GRVQIL++H+ R
Sbjct: 380 MDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHS---RG- 435
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
K + DV+ +++A T F+GA+L+ L+ A A R +K +K E+ ALE++ I
Sbjct: 436 KAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEIS-DALERI-IAG 493
Query: 121 ADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECL-----EAGRI-FIQQSKDT 174
+ +A+ ++ K + E+ H L ++ PV + +AG + F S++
Sbjct: 494 PEKKNAVVSEEKKRLVAYHEA-GHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 552
Query: 175 ESSGLVS 181
SGL S
Sbjct: 553 LESGLYS 559
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG GG + +NQLL++MDG + ++V+ TNR D++D A
Sbjct: 345 IVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSA 404
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 405 LLRPGRFD 412
>UNIPROTKB|I3L0L3 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003338 Pfam:PF02359
GO:GO:0016192 GO:GO:0015031 GO:GO:0043198 GO:GO:0005795
GO:GO:0006813 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GO:GO:0017157 EMBL:AC138645 EMBL:AC217780 HGNC:HGNC:8016
ChiTaRS:NSF Ensembl:ENST00000571172 Bgee:I3L0L3 Uniprot:I3L0L3
Length = 161
Score = 181 (68.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 184 LEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPGRHYIFTLAYSPDVKRGFIGFSL 243
++ + PTDELSL+N A N+ DF + +H+ V T P Y FTL P V G I FSL
Sbjct: 1 MQAARCPTDELSLTNCAVVNEKDF-QSGQHVIVRTSPNHRYTFTLKTHPSVVPGSIAFSL 59
Query: 244 LQRKWAELSLHQDIDVKPFFFN 265
QRKWA LS+ Q+I+V + F+
Sbjct: 60 PQRKWAGLSIGQEIEVSLYTFD 81
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 50/137 (36%), Positives = 74/137 (54%)
Query: 8 NNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDV 67
+N++V+ TNR D++D+ALLRPGRL+ + I P+E GR+ IL++ T + DV
Sbjct: 634 SNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNT----PMGPDV 689
Query: 68 NLKELAALTKNFSGAELEGLVRAAQSCAM--NRLIKATNKVEVDPQALEKLCITRADFLH 125
+L+++AA T FSGA+L L + A A+ N L T K E LE L + H
Sbjct: 690 SLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQE---HFLESLKTVKPSLSH 746
Query: 126 ALETDIKPAFGSSDESL 142
T K F + S+
Sbjct: 747 KDLTLYKNLFQKKEFSI 763
Score = 158 (60.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 47/138 (34%), Positives = 71/138 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++V+G TNR D +D AL RPGR + ++ I P R ILQ+ T+KM
Sbjct: 331 LDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKM--- 387
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP----QALEKL 116
++ V+L LA +T + GA+L L R A A+ K + +D +A +K
Sbjct: 388 -PISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFLEAFKK- 445
Query: 117 CITRADFLHALE-TDIKP 133
I + F + TDIKP
Sbjct: 446 -IQPSSFRSVIGVTDIKP 462
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
++ DE+DA+C RG G + VV Q+L+ +DG+ ++V+G TNR D +D AL
Sbjct: 299 LLFLDEVDALCPRRG--GPHQAPESRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPAL 356
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 357 RRPGRFD 363
Score = 93 (37.8 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 289 IIFDEIDAI-CKARGTAGGNTGVHDTVVN-QLLSKMDGVERLN-NILVIGMTNRRDMIDE 345
++ +E+D + K G + H + +++ E N N++V+ TNR D++D+
Sbjct: 591 VLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDD 650
Query: 346 ALLRPGRLE 354
ALLRPGRL+
Sbjct: 651 ALLRPGRLD 659
Score = 77 (32.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 264 FNP--KNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSK 321
F+P ++ + L + +A N+ I+ DEID+I +R + V D V++ LL++
Sbjct: 537 FSPFVGDSEKILSQVFRQARANTPA-IVFLDEIDSILGSRSISRTECNVQDRVLSVLLNE 595
Query: 322 MDGV 325
+DGV
Sbjct: 596 LDGV 599
>UNIPROTKB|P63345 [details] [associations]
symbol:mpa "Proteasome-associated ATPase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA;IMP] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019941 "modification-dependent protein
catabolic process" evidence=IDA;IMP] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0032182 "small conjugating protein binding" evidence=IDA;IPI]
[GO:0043335 "protein unfolding" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051409 "response to
nitrosative stress" evidence=IMP] [GO:0070628 "proteasome binding"
evidence=IPI] [GO:0071732 "cellular response to nitric oxide"
evidence=IMP] HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0009405 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0051260 EMBL:BX842578 GO:GO:0016887
GO:GO:0071732 GO:GO:0051409 eggNOG:COG0464 EMBL:DQ888314 PIR:F70512
RefSeq:NP_216631.1 RefSeq:NP_336644.1 RefSeq:YP_006515531.1
PDB:3FP9 PDB:3M91 PDB:3M9B PDB:3M9D PDB:3M9H PDBsum:3FP9
PDBsum:3M91 PDBsum:3M9B PDBsum:3M9D PDBsum:3M9H
ProteinModelPortal:P63345 SMR:P63345 DIP:DIP-48292N
MINT:MINT-7262409 PRIDE:P63345 EnsemblBacteria:EBMYCT00000003259
EnsemblBacteria:EBMYCT00000070852 GeneID:13316922 GeneID:887297
GeneID:923659 KEGG:mtc:MT2175 KEGG:mtu:Rv2115c KEGG:mtv:RVBD_2115c
PATRIC:18126540 TubercuList:Rv2115c HOGENOM:HOG000245286 KO:K13527
OMA:VFFDEME ProtClustDB:CLSK872012 UniPathway:UPA00997
EvolutionaryTrace:P63345 GO:GO:0022623 GO:GO:0032182 GO:GO:0019941
GO:GO:0010499 GO:GO:0043335 PANTHER:PTHR23073:SF4
TIGRFAMs:TIGR03689 Uniprot:P63345
Length = 609
Score = 202 (76.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 41/68 (60%), Positives = 54/68 (79%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE+D+I + RGT G ++ V TVV QLLS++DGVE L N++VIG +NR DMID A+
Sbjct: 367 IVFFDEMDSIFRTRGT-GVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAI 425
Query: 348 LRPGRLEV 355
LRPGRL+V
Sbjct: 426 LRPGRLDV 433
Score = 135 (52.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQI 49
+DGVE L N++VIG +NR DMID A+LRPGRL+++++I P+ + I
Sbjct: 400 IDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDI 448
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 45/109 (41%), Positives = 66/109 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG++ L +++++G TNR D+ID ALLRPGRLE + + P+ R +IL+ TA +S
Sbjct: 593 LDGIDPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARREILR--TAG-KSI 649
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVD 109
L+ DV+L E+AA +S A+ L+R A AM R I A N D
Sbjct: 650 P-LSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRRSIDAANVTAAD 697
Score = 168 (64.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 33/72 (45%), Positives = 52/72 (72%)
Query: 283 NSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDM 342
+S ++ DE+DA+ RG + ++GV D VV LL+++DG++ L +++++G TNR D+
Sbjct: 555 DSAPSLVFLDELDALAPRRGQSF-DSGVSDRVVAALLTELDGIDPLRDVVMLGATNRPDL 613
Query: 343 IDEALLRPGRLE 354
ID ALLRPGRLE
Sbjct: 614 IDPALLRPGRLE 625
Score = 81 (33.6 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 10 ILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+++I + R D +D L P + ++ + LP+ R +L+ A + D+NL
Sbjct: 340 VVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLE---ALLNPVP--TGDLNL 394
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNR 98
E+A+ T F A+L LVR A A +R
Sbjct: 395 DEIASRTPGFVVADLAALVREAALRAASR 423
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 202 (76.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 48/116 (41%), Positives = 66/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E ++VI TNR D++D ALLRPGR + Q+ + LP+ GR QIL++H K+
Sbjct: 284 MDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDIRGREQILKVHMRKV--- 340
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L DDV + +A T FSGA+L LV A CA + + E D A +K+
Sbjct: 341 -PLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTARRVVSMKEFDA-AKDKI 394
Score = 154 (59.3 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEIDA+ + RG GG + +NQ+L +MDG E ++VI TNR D++D A
Sbjct: 249 IIFIDEIDAVGRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPA 308
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 309 LLRPGRFD 316
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 179 (68.1 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 33/67 (49%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ RG +G + GV D VV+QLL+++DG+ ++ VIG TNR D++D++L
Sbjct: 890 IIFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSL 949
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 950 LRPGRFD 956
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 47/146 (32%), Positives = 79/146 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D++LLRPGR + + + + NED Q LQ+ A +R +
Sbjct: 924 LDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVYVGI-NEDRESQ-LQVLKAILRKF 981
Query: 61 KKLADDVNLKELA-ALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCIT 119
K A V L ++ + +GA+L L A CA+ R I + VD + L L +
Sbjct: 982 KVDAS-VCLSDIVESCPPRLTGADLYSLCSDAMMCAVKRKISRITE-GVDSE-LSSLTLC 1038
Query: 120 RADFLHALETDIKPAFGSSDESLEHF 145
DF AL + ++P+ S++ + +
Sbjct: 1039 SEDFSEAL-SGLQPSV--SEQQISRY 1061
Score = 71 (30.1 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 30/99 (30%), Positives = 42/99 (42%)
Query: 35 QMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSC 94
Q+ I +ED R +L + + L DVNL +A T F +L L+ A
Sbjct: 681 QVAIESLSEDQRRMVL----SSLSEDLLLGKDVNLGRIAKQTAGFVLGDLCALLTNAGKA 736
Query: 95 AMNRLIKATNKVEVDPQALEKLCI-----TRADFLHALE 128
A RL++ V Q E LC+ T DF AL+
Sbjct: 737 AHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALD 775
>UNIPROTKB|O50202 [details] [associations]
symbol:arc "Proteasome-associated ATPase" species:1833
"Rhodococcus erythropolis" [GO:0000502 "proteasome complex"
evidence=IGC] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGC] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0022623 "proteasome-activating nucleotidase complex"
evidence=IGC] [GO:0043273 "CTPase activity" evidence=IDA]
HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 GO:GO:0010498
UniPathway:UPA00997 GO:GO:0022623 GO:GO:0019941
PANTHER:PTHR23073:SF4 TIGRFAMs:TIGR03689 EMBL:AF088800 PDB:2WFW
PDBsum:2WFW ProteinModelPortal:O50202 EvolutionaryTrace:O50202
GO:GO:0043273 Uniprot:O50202
Length = 591
Score = 199 (75.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 52/125 (41%), Positives = 76/125 (60%)
Query: 244 LQRKWAELSLHQDIDVKPFFFN---PKNTSEFL------CTIILEAG---PNSGLHIIIF 291
L +K AE D K +F N P+ ++F+ +I + + G +I+F
Sbjct: 292 LAKKIAEARGQDSKDAKSYFLNIKGPELLNKFVGETERHIRMIFQRAREKASEGTPVIVF 351
Query: 292 -DEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEALLRP 350
DE+D+I + RG+ G ++ V TVV QLLS++DGVE L N++VIG +NR DMID A+LRP
Sbjct: 352 FDEMDSIFRTRGS-GVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRP 410
Query: 351 GRLEV 355
GRL+V
Sbjct: 411 GRLDV 415
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQI 49
+DGVE L N++VIG +NR DMID A+LRPGRL+++++I P+ + I
Sbjct: 382 IDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAESAQDI 430
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 202 (76.2 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 47/109 (43%), Positives = 68/109 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E L+ + V+ T+R D+ID ALLRPGRL+ + +PN + R+ ILQ T KM
Sbjct: 863 MDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKM--- 919
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVD 109
L+DDVNL E+A T FSGA+++GL A A++ ++ ++ E D
Sbjct: 920 -DLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQREQD 967
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE D+I RG +TGV D VVNQ+L++MDG E L+ + V+ T+R D+ID AL
Sbjct: 831 ILFFDEFDSIAPKRGH--DSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSAL 888
Query: 348 LRPGRLEVSEI 358
LRPGRL+ S I
Sbjct: 889 LRPGRLDKSVI 899
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 202 (76.2 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 47/109 (43%), Positives = 68/109 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E L+ + V+ T+R D+ID ALLRPGRL+ + +PN + R+ ILQ T KM
Sbjct: 863 MDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDILQSITTKM--- 919
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVD 109
L+DDVNL E+A T FSGA+++GL A A++ ++ ++ E D
Sbjct: 920 -DLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQREQD 967
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE D+I RG +TGV D VVNQ+L++MDG E L+ + V+ T+R D+ID AL
Sbjct: 831 ILFFDEFDSIAPKRGH--DSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSAL 888
Query: 348 LRPGRLEVSEI 358
LRPGRL+ S I
Sbjct: 889 LRPGRLDKSVI 899
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 181 (68.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 48/120 (40%), Positives = 70/120 (58%)
Query: 240 GFSLLQRKWA-ELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAGPNSGLHIIIFDEIDA 296
G +LL + A ELSL + + +K P N SE + E NS +I FDE+D+
Sbjct: 700 GKTLLAKAVATELSL-EFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDS 758
Query: 297 ICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNN--ILVIGMTNRRDMIDEALLRPGRLE 354
I RG + + V D VV+QLL+++D + + NN + VIG TNR D++D +LLRPGR +
Sbjct: 759 IAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFD 818
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/116 (31%), Positives = 68/116 (58%)
Query: 1 MDGVERLNN--ILVIGMTNRRDMIDEALLRPGRLELQMEISL-PNEDGRVQILQIHTAKM 57
+D + + NN + VIG TNR D++D +LLRPGR + + + + +E+ + +L+ T
Sbjct: 784 LDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALT--- 840
Query: 58 RSYKKLADDVNLKELAA-LTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQA 112
+++K L + ++L E+A NF+GA++ L A A+ R TN++++ QA
Sbjct: 841 KTFK-LDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKR---KTNEIDLLIQA 892
Score = 66 (28.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 11 LVIGMTNRRDMIDEALLRPGRLELQM-EISLPNEDGRVQILQIHTAKMRSYKKLADDVNL 69
+VIG + + I +L EL+ E+ + D R+++L+I+ + K+ ++L
Sbjct: 527 IVIGTCHSIEKIPYEILSESFFELKFSELEM---DERLELLKIYANNVIIDKR----ISL 579
Query: 70 KELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITRAD 122
K++A T + S ELE L A++R IK T + D L IT D
Sbjct: 580 KDVALKTNSMSFGELECLPDHMTKAAVDR-IKRTG-YDNDSIILSGPIITEQD 630
Score = 50 (22.7 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 163 AGRIFIQQSKDTESSGLVSVLLEVDKVPTDELSLSNFAAANKDDFVE 209
AGRIF+ + + G V + D + D L +S A K DFV+
Sbjct: 51 AGRIFLPINNEDLEDGTVEIS-GYDNLLADALYISTIAPV-KLDFVQ 95
Score = 39 (18.8 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 210 DTKHIEVTTGPGRHY 224
DT+H V P HY
Sbjct: 239 DTEHDSVQLSPSLHY 253
Score = 39 (18.8 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 92 QSCAMNRLIKATNKVEVDPQALEKL 116
QSC +L+KA N V Q +K+
Sbjct: 292 QSCFSEKLLKAANLCVVQ-QVKQKV 315
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 184 (69.8 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ +RG +G + GV D VV+QLL+++DG+ ++ VIG TNR D++D AL
Sbjct: 800 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 859
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 860 LRPGRFD 866
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/146 (31%), Positives = 74/146 (50%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D ALLRPGR + + + +ED R L++ +A R +
Sbjct: 834 LDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGA-SED-RASQLRVLSAITRKF 891
Query: 61 KKLADDVNLKE-LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNK-VEVDPQALEKLCI 118
K L V+L L +GA+L L A A+ R ++ + +E+ AL +
Sbjct: 892 K-LEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLELRSSAL---LL 947
Query: 119 TRADFLHALETDIKPAFGSSDESLEH 144
T D L A ++P+ S E L +
Sbjct: 948 TMEDLLQAAAR-LQPSV-SEQELLRY 971
Score = 63 (27.2 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 28/100 (28%), Positives = 45/100 (45%)
Query: 2 DGVERLNNILVIGMTNR-RDM-IDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRS 59
D + R ++V+ T+R +D+ D P LE + + +E R+ ILQ TA +
Sbjct: 560 DALSRCPPLMVVATTSRVQDLPTDVQTAFPHELE----VPVLSEAQRLSILQALTAHL-- 613
Query: 60 YKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRL 99
L +VNL +LA F +L L+ A R+
Sbjct: 614 --PLGQEVNLPQLARRCAGFVVGDLYALLTHTCRAACTRI 651
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 184 (69.8 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ +RG +G + GV D VV+QLL+++DG+ ++ VIG TNR D++D AL
Sbjct: 389 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 448
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 449 LRPGRFD 455
Score = 143 (55.4 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 46/145 (31%), Positives = 74/145 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D ALLRPGR + + + NED R L++ +A R +
Sbjct: 423 LDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGA-NED-RASQLRVLSAITRKF 480
Query: 61 KKLADDVNLKE-LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCIT 119
K L V+L L +GA+L L A + A+ R + + ++P + L +T
Sbjct: 481 K-LEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEE-GLEPGS-SALMLT 537
Query: 120 RADFLHALETDIKPAFGSSDESLEH 144
D L A ++P+ S E L +
Sbjct: 538 MEDLLQAAAR-LQPSV-SEQELLRY 560
Score = 56 (24.8 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 35 QMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSC 94
++E+ +E R+ IL+ TA + L +VNL +LA F +L L+ +
Sbjct: 180 ELEVPALSEGQRLSILRALTAHL----PLGQEVNLAQLARRCAGFVVGDLYALLTHSSRA 235
Query: 95 AMNRL 99
A R+
Sbjct: 236 ACTRI 240
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 184 (69.8 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ +RG +G + GV D VV+QLL+++DG+ ++ VIG TNR D++D AL
Sbjct: 788 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 847
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 848 LRPGRFD 854
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 44/145 (30%), Positives = 74/145 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D ALLRPGR + + + +ED R L++ +A R +
Sbjct: 822 LDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGA-SED-RASQLRVLSAITRKF 879
Query: 61 KKLADDVNLKE-LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCIT 119
+ L V+L L +GA+L L A + A+ R ++ ++P + L +T
Sbjct: 880 R-LEPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKRRVRDLED-GLEPGS-SALLLT 936
Query: 120 RADFLHALETDIKPAFGSSDESLEH 144
D L A ++P+ S E L +
Sbjct: 937 MEDLLQAAAR-LQPSV-SEHELLRY 959
Score = 62 (26.9 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 35 QMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSC 94
++E+ + +E R+ ILQ TA + L +VNL +LA F +L L+ +
Sbjct: 579 ELEVPVLSEGQRLSILQALTAHL----PLGQEVNLAQLARRCAGFVVGDLYALLTHSSRA 634
Query: 95 AMNRL 99
A R+
Sbjct: 635 ACTRI 639
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 202 (76.2 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 70/204 (34%), Positives = 107/204 (52%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + SLP++D R +IL+IHT R +
Sbjct: 539 MDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHT---RDW 595
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D+ L+ELA + GA+++ + A CA+ R + + K+++D L +
Sbjct: 596 NPKPLDIFLEELAENCVGYCGADIKSICSEAALCALRRRYPQIYTTSEKLQLD---LSSI 652
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLSRGI--LNWGTPVQECLEA-GRIF----IQ 169
I+ DF A++ I PA + S LS + L T V + LEA R+F I+
Sbjct: 653 NISAKDFEVAMQKMI-PAAQRAVTSPGQALSTVVKPLLQST-VHKILEALQRVFPHAEIR 710
Query: 170 QSKDTESSGLVSVLLEVDKVPTDE 193
+K +S + LLE D +D+
Sbjct: 711 TNKALDSD-ISCPLLESDLAYSDD 733
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 507 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPAL 564
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 565 RRPGRFD 571
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 193 (73.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 44/98 (44%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG NI VI TNR D++D ALLR GRL+ ++E LPNE+ R ILQIH+ KM
Sbjct: 299 LDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMN-- 356
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN ELA +++F+GA+L+ + A A+ R
Sbjct: 357 --VSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRR 392
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 34/78 (43%), Positives = 45/78 (57%)
Query: 279 EAGPNSGLHIIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGM 336
E GP II DE+DAI R G+ V T++ +LL+++DG NI VI
Sbjct: 259 EKGPT----IIFIDELDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDANIKVIAA 313
Query: 337 TNRRDMIDEALLRPGRLE 354
TNR D++D ALLR GRL+
Sbjct: 314 TNRIDILDPALLRSGRLD 331
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 184 LEVDKVPTDELS 195
+E+D+ PT+E S
Sbjct: 157 MEIDEKPTEEYS 168
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 51/138 (36%), Positives = 79/138 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + SLP+++ R +IL+IHT R +
Sbjct: 214 MDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHT---RDW 270
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D+ L+ELA + GA+++ + A CA+ R + + K+++D L +
Sbjct: 271 NPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLD---LSSI 327
Query: 117 CITRADFLHALETDIKPA 134
I+ DF AL+ I+PA
Sbjct: 328 TISAKDFEAALQK-IRPA 344
Score = 147 (56.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 182 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPAL 239
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 240 RRPGRFD 246
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 55/145 (37%), Positives = 79/145 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VIG TNR D ID AL RPGR + + LP+ R +IL+IHT R +
Sbjct: 533 MDGMDNRGQVIVIGATNRPDAIDPALRRPGRFDREFYFPLPDLGSRKEILKIHT---RKW 589
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRL---IKATN-KVEVDPQALEKL 116
D+ L+ LA LTK + GA+L L A ++ R I TN K++V+P K+
Sbjct: 590 NPELPDLFLERLAQLTKGYGGADLRALCTEAALNSIQRKYPQIYGTNEKLKVNPS---KV 646
Query: 117 CITRADFLHALETDIKPAFGSSDES 141
+ DF+ A+E I P+ S S
Sbjct: 647 KVIAKDFMKAIEK-IVPSSARSTSS 670
Score = 153 (58.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 276 IILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
++ E N II FDEID + R + +H ++V+ LL+ MDG++ ++VIG
Sbjct: 489 LLFEEAKNQQPSIIFFDEIDGLAPVRSSK--QEQIHASIVSTLLALMDGMDNRGQVIVIG 546
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D ID AL RPGR +
Sbjct: 547 ATNRPDAIDPALRRPGRFD 565
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 193 (73.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 43/98 (43%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D +D ALLR GRL+ ++E+ PNE+ R +ILQIH+ KM +
Sbjct: 317 LDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVH 376
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
K DVN +ELA T +F+GA+L+ + A A+ R
Sbjct: 377 K----DVNFEELARSTDDFNGAQLKAVCVEAGMIALRR 410
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 193 (73.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 43/98 (43%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D +D ALLR GRL+ ++E+ PNE+ R +ILQIH+ KM +
Sbjct: 317 LDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVH 376
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
K DVN +ELA T +F+GA+L+ + A A+ R
Sbjct: 377 K----DVNFEELARSTDDFNGAQLKAVCVEAGMIALRR 410
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 337
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 338 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 304 ALLRPGRID 312
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 337
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 338 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 304 ALLRPGRID 312
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 337
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 338 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 304 ALLRPGRID 312
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 337
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 338 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 304 ALLRPGRID 312
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 337
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 338 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 304 ALLRPGRID 312
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 337
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 338 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 304 ALLRPGRID 312
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 280 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 337
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 338 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 381
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 304 ALLRPGRID 312
>UNIPROTKB|Q9ULI0 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HOVERGEN:HBG080873 HOGENOM:HOG000034119 EMBL:AC009242 EMBL:AC066692
EMBL:AC079924 EMBL:AK094821 EMBL:AK131301 EMBL:AB033066
IPI:IPI00456004 IPI:IPI00739581 RefSeq:NP_001229267.1
RefSeq:NP_060022.1 UniGene:Hs.467862 PDB:2DKW PDB:3LXJ PDBsum:2DKW
PDBsum:3LXJ ProteinModelPortal:Q9ULI0 SMR:Q9ULI0 PhosphoSite:Q9ULI0
DMDM:296439432 PaxDb:Q9ULI0 PRIDE:Q9ULI0 Ensembl:ENST00000238789
GeneID:54454 KEGG:hsa:54454 UCSC:uc002rei.4 UCSC:uc002rek.4
CTD:54454 GeneCards:GC02M023971 HGNC:HGNC:29230 HPA:HPA034555
neXtProt:NX_Q9ULI0 PharmGKB:PA162377039 InParanoid:Q9ULI0
OMA:NAQDFYH OrthoDB:EOG49KFQ1 EvolutionaryTrace:Q9ULI0
GenomeRNAi:54454 NextBio:56685 ArrayExpress:Q9ULI0 Bgee:Q9ULI0
CleanEx:HS_ATAD2B Genevestigator:Q9ULI0 GermOnline:ENSG00000119778
GO:GO:0070577 InterPro:IPR018359 Uniprot:Q9ULI0
Length = 1458
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 53/151 (35%), Positives = 82/151 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + +LP++ R ILQIHT R +
Sbjct: 533 MDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHT---RDW 589
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D L ELA + GA+++ L A A+ R + +++K+++D + +
Sbjct: 590 NPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLD---VSSI 646
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLS 147
++ DF HA++ +I PA + S H LS
Sbjct: 647 VLSAQDFYHAMQ-NIVPASQRAVMSSGHALS 676
Score = 148 (57.2 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 501 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPAL 558
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 559 RRPGRFD 565
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 96/320 (30%), Positives = 144/320 (45%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
++ V +LVIG TNR D +D AL R GR + ++ + +P+E R +ILQ K+R
Sbjct: 289 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR-- 346
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR-LIKATNKVEVDPQALEKLCIT 119
L + LA LT F GA+L L R A CA+NR L+K + + +P+ +E L +
Sbjct: 347 --LPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPE-MEDLP-S 402
Query: 120 RADFLHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQE------CLEAGRIFIQQSKD 173
+ L T+ P + DE L+ L G+L P+ E C+E + S
Sbjct: 403 KGVQEERLGTE--PTSETQDE-LQRLL--GLLRDQDPLSEEQMQGLCIELNDFIVALSSV 457
Query: 174 TESS---GLVSV----LLEVDKVPT--DELSLSNFAAA-NKDDFVEDTKHIEVTTGPGRH 223
S+ G V+V ++ + +EL+++ A N D F K + + T G
Sbjct: 458 QPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQF----KALGLVTPAG-- 511
Query: 224 YIFTLAYSPDVKRGFIGFSLLQRKWAELSLHQDIDVK-PFFFNPK-NTSEFLCTIILEAG 281
LA P G +LL + A S I VK P N SE + +
Sbjct: 512 --VLLAGPPGC-----GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 564
Query: 282 PNSGLHIIIFDEIDAICKAR 301
NS +I FDE+DA+C R
Sbjct: 565 KNSAPCVIFFDEVDALCPRR 584
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 286 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 343
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 344 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 387
Score = 150 (57.9 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 251 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 309
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 310 ALLRPGRID 318
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 288 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 345
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 346 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 389
Score = 150 (57.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 253 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 311
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 312 ALLRPGRID 320
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 288 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 345
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 346 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 389
Score = 150 (57.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R G +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 253 IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDS 311
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 312 ALLRPGRID 320
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 53/151 (35%), Positives = 81/151 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + +LP++ R ILQIHT R +
Sbjct: 423 MDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHT---RDW 479
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D L ELA + GA+++ L A A+ R + +++K+++D + +
Sbjct: 480 NPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLD---VSSI 536
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLS 147
+ DF HA++ +I PA + S H LS
Sbjct: 537 VLNAQDFYHAMQ-NIVPASQRAVMSSGHALS 566
Score = 148 (57.2 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 391 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPAL 448
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 449 RRPGRFD 455
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 195 (73.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 43/116 (37%), Positives = 67/116 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E I++I TNR D++D AL+RPGR + Q+ + P+ GR +IL++H
Sbjct: 302 MDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARN---- 357
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
KKLA +V++ +A T FSGA+L L+ A R A +E+D A++++
Sbjct: 358 KKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEID-DAVDRV 412
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
+I DEIDA+ + RG GG + +NQLL++MDG E I++I TNR D++D A
Sbjct: 267 LIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSA 326
Query: 347 LLRPGRLE 354
L+RPGR +
Sbjct: 327 LMRPGRFD 334
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 197 (74.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 49/120 (40%), Positives = 73/120 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG +I+VIG TNR D +D ALLRPGR + + + LP+ +GR +IL+I+ K++S
Sbjct: 281 MDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSD 340
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA---------MNRLIKATNKVEVDPQ 111
KL D ++++A LT FSGA+LE +V A A +N L +A +KV + P+
Sbjct: 341 LKLED---IEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARDKVSMGPE 397
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 34/70 (48%), Positives = 42/70 (60%)
Query: 288 IIIFDEIDAICKARGTA---GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
I+ DEIDAI R + G HD +NQLL +MDG +I+VIG TNR D +D
Sbjct: 244 IVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLD 303
Query: 345 EALLRPGRLE 354
ALLRPGR +
Sbjct: 304 SALLRPGRFD 313
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 197 (74.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 49/120 (40%), Positives = 73/120 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG +I+VIG TNR D +D ALLRPGR + + + LP+ +GR +IL+I+ K++S
Sbjct: 281 MDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSD 340
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA---------MNRLIKATNKVEVDPQ 111
KL D ++++A LT FSGA+LE +V A A +N L +A +KV + P+
Sbjct: 341 LKLED---IEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARDKVSMGPE 397
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 34/70 (48%), Positives = 42/70 (60%)
Query: 288 IIIFDEIDAICKARGTA---GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
I+ DEIDAI R + G HD +NQLL +MDG +I+VIG TNR D +D
Sbjct: 244 IVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLD 303
Query: 345 EALLRPGRLE 354
ALLRPGR +
Sbjct: 304 SALLRPGRFD 313
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 53/151 (35%), Positives = 81/151 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + +LP++ R ILQIHT R +
Sbjct: 371 MDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHT---RDW 427
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D L ELA + GA+++ L A A+ R + +++K+++D + +
Sbjct: 428 NPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLD---VSSI 484
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLS 147
+ DF HA++ +I PA + S H LS
Sbjct: 485 VLNAQDFYHAMQ-NIVPASQRAVMSSGHALS 514
Score = 148 (57.2 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 339 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPAL 396
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 397 RRPGRFD 403
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++I VI TNR D++D ALLR GRL+ ++E+ PNED R +I+QIH+ KM
Sbjct: 308 LDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVN 367
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
K DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 368 K----DVNFEELARCTDDFNGAQCKAVCVEAGMIALRR 401
Score = 119 (46.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DE+DAI R G+ V T++ +LL+++DG + ++I VI TNR D++D
Sbjct: 273 IIFIDELDAIGTKRFDSEKAGDREVQRTML-ELLNQLDGFQPNDDIKVIAATNRIDVLDP 331
Query: 346 ALLRPGRLE 354
ALLR GRL+
Sbjct: 332 ALLRSGRLD 340
Score = 37 (18.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 186 VDKVPTDELSLSNFAAANKDDFV 208
V V DEL + NKD ++
Sbjct: 128 VGLVDPDELKPGDLVGVNKDSYL 150
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++I VI TNR D++D ALLR GRL+ ++E+ PNED R +I+QIH+ KM
Sbjct: 308 LDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVN 367
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
K DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 368 K----DVNFEELARCTDDFNGAQCKAVCVEAGMIALRR 401
Score = 119 (46.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DE+DAI R G+ V T++ +LL+++DG + ++I VI TNR D++D
Sbjct: 273 IIFIDELDAIGTKRFDSEKAGDREVQRTML-ELLNQLDGFQPNDDIKVIAATNRIDVLDP 331
Query: 346 ALLRPGRLE 354
ALLR GRL+
Sbjct: 332 ALLRSGRLD 340
Score = 37 (18.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 186 VDKVPTDELSLSNFAAANKDDFV 208
V V DEL + NKD ++
Sbjct: 128 VGLVDPDELKPGDLVGVNKDSYL 150
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 69/203 (33%), Positives = 104/203 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + SLP++D R +IL+IHT R +
Sbjct: 545 MDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHT---RDW 601
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D+ L+ELA + + GA+++ + A CA+ R + + K+++D L +
Sbjct: 602 NPKPLDMFLEELAENSVGYCGADIKSVCSEAALCALRRRYPQIYTTSEKLQLD---LSSI 658
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLSRGI--LNWGTPVQECLEA-GRIFIQQSKD 173
I+ DF A++ I PA + S LS + L T V + LEA R+F
Sbjct: 659 NISAKDFEVAMQKMI-PASQRAVTSPGQALSTIVKPLLQST-VHKILEALQRVFPHAETR 716
Query: 174 TES---SGLVSVLLEVDKVPTDE 193
T S + LLE D +D+
Sbjct: 717 TNKALDSDISCPLLESDLAYSDD 739
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 513 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPAL 570
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 571 RRPGRFD 577
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 69/204 (33%), Positives = 108/204 (52%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + SLP++D R +IL+IHT R +
Sbjct: 555 MDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHT---RDW 611
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D+ L+ELA + GA+++ + A CA+ R + + K+++D L +
Sbjct: 612 NPKPLDMFLEELAENCVGYCGADIKSICSEAALCALRRRYPQIYTTSEKLQLD---LSSI 668
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLSRGI--LNWGTPVQECLEA-GRIF----IQ 169
I+ DF A++ I PA + S LS + L T V + LEA R+F I+
Sbjct: 669 TISAKDFEVAMQKMI-PASQRAVTSPGQALSTIVKPLLQST-VHKILEALQRVFPHAEIR 726
Query: 170 QSKDTESSGLVSVLLEVDKVPTDE 193
++K +S + LL+ D +D+
Sbjct: 727 KNKALDSD-ISCPLLKSDLAYSDD 749
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 523 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPAL 580
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 581 RRPGRFD 587
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 279 LDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 336
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 337 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 380
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEID+I +R +GG++ V T++ +LL+++DG E NI VI TNR D++D
Sbjct: 244 IIFMDEIDSIGSSRIESGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDP 302
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 303 ALLRPGRID 311
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 45/116 (38%), Positives = 70/116 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + + ++V+G TNR D++D AL RPGR + + + P++ GR IL++H +K
Sbjct: 456 MDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKEL- 514
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVD-PQALEK 115
L DDVNL +A++T F+GA+L LV A A + TN ++D QA+E+
Sbjct: 515 -PLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRK--NKTNVEKIDFIQAVER 567
Score = 146 (56.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 288 IIIFDEIDAICKAR-GTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDA+ K+R G G+ + +NQLL++MDG + + ++V+G TNR D++D
Sbjct: 420 IIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDP 479
Query: 346 ALLRPGRLE 354
AL RPGR +
Sbjct: 480 ALRRPGRFD 488
>UNIPROTKB|F1P871 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:AAEX03010776 EMBL:AAEX03010777
EMBL:AAEX03010778 Ensembl:ENSCAFT00000006311 Uniprot:F1P871
Length = 1464
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 53/151 (35%), Positives = 81/151 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + +LP++ R ILQIHT R +
Sbjct: 536 MDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHT---RDW 592
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D L ELA + GA+++ L A A+ R + +++K+++D + +
Sbjct: 593 NPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLD---VSSI 649
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLS 147
+ DF HA++ +I PA + S H LS
Sbjct: 650 VLNAQDFYHAMQ-NIVPASQRAVMSSGHALS 679
Score = 148 (57.2 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 504 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPAL 561
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 562 RRPGRFD 568
>UNIPROTKB|F1MEY1 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:DAAA02031678 EMBL:DAAA02031679
EMBL:DAAA02031680 EMBL:DAAA02031681 IPI:IPI01003034
Ensembl:ENSBTAT00000022935 Uniprot:F1MEY1
Length = 1465
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 53/151 (35%), Positives = 81/151 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + +LP++ R ILQIHT R +
Sbjct: 538 MDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHT---RDW 594
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D L ELA + GA+++ L A A+ R + +++K+++D + +
Sbjct: 595 NPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLD---VSSI 651
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLS 147
+ DF HA++ +I PA + S H LS
Sbjct: 652 VLNAQDFYHAMQ-NIVPASQRAVMSSGHALS 681
Score = 148 (57.2 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 506 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPAL 563
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 564 RRPGRFD 570
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 195 (73.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 42/109 (38%), Positives = 63/109 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E ++V+ TNR D++D ALLRPGR + Q+ + +P+ GR IL++H
Sbjct: 357 MDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGN---- 412
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVD 109
KK +DV+L+ +A T FSGA+L L+ A A R + + E+D
Sbjct: 413 KKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEID 461
Score = 165 (63.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RGT GG + +NQLL++MDG E ++V+ TNR D++D A
Sbjct: 322 IVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSA 381
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 382 LLRPGRFD 389
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 192 (72.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 274 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 331
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A L SGAE++G+ A A+ R + T +
Sbjct: 332 --LTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQE 375
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 288 IIIFDEIDAI-CKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEID+I + G +GG++ V T++ +LL+++DG E NI VI TNR D++D A
Sbjct: 240 IIFMDEIDSIGSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSA 298
Query: 347 LLRPGRLE 354
LLRPGR++
Sbjct: 299 LLRPGRID 306
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 190 (71.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E L N+ +I TNR D++D AL+RPGRL+ ++EI LPNE R++IL+IH KM
Sbjct: 268 LDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMT-- 325
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRL 99
KL D ++ + + L F+GA+L + A A+ +
Sbjct: 326 -KLGD-IDYESVCRLCDGFNGADLRNVCTEAGMFAIRAM 362
Score = 133 (51.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R + G + + T++ +LL+ +DG E L N+ +I TNR D++D
Sbjct: 233 IIFMDEIDAIGGRRFSQGTSADREIQRTLM-ELLNHLDGFEELGNVKIIMATNRPDVLDP 291
Query: 346 ALLRPGRLE 354
AL+RPGRL+
Sbjct: 292 ALVRPGRLD 300
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 190 (71.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E L N+ +I TNR D++D AL+RPGRL+ ++EI LPNE R++IL+IH KM
Sbjct: 268 LDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMT-- 325
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRL 99
KL D ++ + + L F+GA+L + A A+ +
Sbjct: 326 -KLGD-IDYESVCRLCDGFNGADLRNVCTEAGMFAIRAM 362
Score = 133 (51.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R + G + + T++ +LL+ +DG E L N+ +I TNR D++D
Sbjct: 233 IIFMDEIDAIGGRRFSQGTSADREIQRTLM-ELLNHLDGFEELGNVKIIMATNRPDVLDP 291
Query: 346 ALLRPGRLE 354
AL+RPGRL+
Sbjct: 292 ALVRPGRLD 300
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 191 (72.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 42/96 (43%), Positives = 61/96 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + V+ TNR D++D ALLR GRL+ ++E LP+ED R QILQIH+ KM +
Sbjct: 312 LDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTT- 370
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAM 96
DD+N +ELA T F+GA+L+ + A A+
Sbjct: 371 ---DDDINWQELARSTDEFNGAQLKAVTVEAGMIAL 403
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
+ +V+ TNR DM+D+ALLRPGRL+ + I P+ GR+ IL+I T K+ L DV+
Sbjct: 621 DFMVVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKI----PLDTDVS 676
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAM 96
L+++AA T FSGA++E L + A A+
Sbjct: 677 LQDIAARTDLFSGADIENLCKEAALLAL 704
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 285 GLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
G ++ DEIDA+C RG++ N+ D +V QLL+ +DGV R + ++V+ TNR D +D
Sbjct: 293 GPTVLFIDEIDALCPKRGSS--NSAPEDRLVAQLLTLLDGVGRKDRMVVVAATNRPDALD 350
Query: 345 EALLRPGRLE 354
AL RPGR +
Sbjct: 351 PALRRPGRFD 360
Score = 150 (57.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 47/134 (35%), Positives = 73/134 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGV R + ++V+ TNR D +D AL RPGR + ++ I P R ILQ+ T M
Sbjct: 328 LDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQMLTCSM--- 384
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
++ D++L +LA +T + GA+L L R A AM + ++ +D + E L I
Sbjct: 385 -PISTDIDLVKLAEMTTGYVGADLTALCREA---AMQAVFHSS----LD--SAEVL-INM 433
Query: 121 ADFLHALETDIKPA 134
ADF A + I+P+
Sbjct: 434 ADFQEAFKK-IQPS 446
Score = 92 (37.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 316 NQLLSKMDGVERLN-NILVIGMTNRRDMIDEALLRPGRLE 354
N+L +++ E L+ + +V+ TNR DM+D+ALLRPGRL+
Sbjct: 606 NKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRPGRLD 645
Score = 85 (35.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 264 FNPK--NTSEFLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSK 321
F+P ++ + L + +A N+ II DEID+I +R + GV + V++ LL++
Sbjct: 534 FSPYVGDSEKILSQVFRQARANTPA-IIFLDEIDSILGSRSHSKSGHGVSERVLSVLLNE 592
Query: 322 MDGV-----ERLNNILVIGM----TNRRD-MIDEALLRPGRLE 354
+DGV ER N L + + T RD M+ A RP L+
Sbjct: 593 LDGVGLKVTERRGNKLQLELEFQETLSRDFMVVAATNRPDMLD 635
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 193 (73.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 44/109 (40%), Positives = 66/109 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +++I TNR D++D ALLRPGR + Q+ IS+P+ +GR +I+ +H K+ +
Sbjct: 286 MDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIKKVPT- 344
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA--MNRLIKATNKVE 107
A DVN++ +A T FSGA+L LV A A +N+ I + E
Sbjct: 345 ---APDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFE 390
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
+ E G + II DEIDA+ + RG GG + +NQLL +MDG E +++I
Sbjct: 240 MFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIA 299
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 300 ATNRPDVLDSALLRPGRFD 318
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 193 (73.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 44/109 (40%), Positives = 66/109 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +++I TNR D++D ALLRPGR + Q+ IS+P+ +GR +I+ +H K+ +
Sbjct: 286 MDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIKKVPT- 344
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCA--MNRLIKATNKVE 107
A DVN++ +A T FSGA+L LV A A +N+ I + E
Sbjct: 345 ---APDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFE 390
Score = 162 (62.1 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
+ E G + II DEIDA+ + RG GG + +NQLL +MDG E +++I
Sbjct: 240 MFEQGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIA 299
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 300 ATNRPDVLDSALLRPGRFD 318
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 193 (73.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 45/116 (38%), Positives = 67/116 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG I++I TNR D++D ALLRPGR + + + P+ +GR +IL++H
Sbjct: 288 MDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKG---- 343
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
K L DDV+L LA T F+GA+L +V A A R K N E++ +A+E++
Sbjct: 344 KPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEME-EAIERV 398
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG GG + +NQLL +MDG I++I TNR D++D A
Sbjct: 253 IVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPA 312
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 313 LLRPGRFD 320
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 193 (73.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 45/116 (38%), Positives = 67/116 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG I++I TNR D++D ALLRPGR + + + P+ +GR +IL++H
Sbjct: 288 MDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKG---- 343
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
K L DDV+L LA T F+GA+L +V A A R K N E++ +A+E++
Sbjct: 344 KPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEME-EAIERV 398
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG GG + +NQLL +MDG I++I TNR D++D A
Sbjct: 253 IVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPA 312
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 313 LLRPGRFD 320
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 181 (68.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ +RG G + GV D VV+QLL+++DG+ ++ VIG TNR D++D AL
Sbjct: 799 IIFFDELDSLAPSRGRNGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 858
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 859 LRPGRFD 865
Score = 140 (54.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 45/145 (31%), Positives = 76/145 (52%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D ALLRPGR + + + + +ED R L++ +A R +
Sbjct: 833 LDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGV-SED-RASQLRVLSAITRKF 890
Query: 61 KKLADDVNLKE-LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCIT 119
K L V+L L +GA+L L A + A+ R ++ + ++P + L +T
Sbjct: 891 K-LEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRRVRDLEE-GLEPGS-STLLLT 947
Query: 120 RADFLHALETDIKPAFGSSDESLEH 144
D L A ++P+ S E L +
Sbjct: 948 MDDLLQAAAR-LQPSV-SEQELLRY 970
Score = 60 (26.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 35 QMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSC 94
++E+ + +E R+ +LQ TA + L +VNL +LA F +L L+ +
Sbjct: 590 ELEVPVLSEGQRLSVLQALTAHL----PLGQEVNLTQLARRCAGFVVGDLYALLTHSSRV 645
Query: 95 AMNRL 99
A R+
Sbjct: 646 ACTRI 650
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 188 (71.2 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 40/107 (37%), Positives = 67/107 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L + V T+R D++D ALLRPGRL+ + P+ R++IL + + K+
Sbjct: 972 LDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLL-- 1029
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE 107
+ADD++L+ +A +T+ FSGA+L+ L+ AQ A++ + +K E
Sbjct: 1030 --MADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPE 1074
Score = 173 (66.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE D+I RG NTGV D VVNQ L+++DGVE L + V T+R D++D AL
Sbjct: 940 ILFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPAL 997
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 998 LRPGRLD 1004
Score = 70 (29.7 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 31/114 (27%), Positives = 51/114 (44%)
Query: 20 DMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNF 79
+ I + L GR + ++++ P R IL+ H + R ++D+ L LAA + +
Sbjct: 723 EQIPQTLSSSGRFDFHVQLAAPATSERGAILK-HEIQKRLLD-CSEDI-LLNLAAKCEGY 779
Query: 80 SGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITRA--DFLHALETDI 131
+LE LV A A+ R + + + L K TRA DF+ DI
Sbjct: 780 DAYDLEILVDRAVHAAIGRHLPLESNIS--KYNLVKEDFTRAMHDFVPVAMRDI 831
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 184 (69.8 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ +RG +G + GV D VV+QLL+++DG+ ++ VIG TNR D++D AL
Sbjct: 799 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 858
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 859 LRPGRFD 865
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 46/145 (31%), Positives = 74/145 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D ALLRPGR + + + NED R L++ +A R +
Sbjct: 833 LDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGA-NED-RASQLRVLSAITRKF 890
Query: 61 KKLADDVNLKE-LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCIT 119
K L V+L L +GA+L L A + A+ R + + ++P + L +T
Sbjct: 891 K-LEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEE-GLEPGS-SALMLT 947
Query: 120 RADFLHALETDIKPAFGSSDESLEH 144
D L A ++P+ S E L +
Sbjct: 948 MEDLLQAAAR-LQPSV-SEQELLRY 970
Score = 56 (24.8 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 35 QMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSC 94
++E+ +E R+ IL+ TA + L +VNL +LA F +L L+ +
Sbjct: 590 ELEVPALSEGQRLSILRALTAHL----PLGQEVNLAQLARRCAGFVVGDLYALLTHSSRA 645
Query: 95 AMNRL 99
A R+
Sbjct: 646 ACTRI 650
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 68/203 (33%), Positives = 104/203 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + SLP+++ R +IL+IHT R +
Sbjct: 559 MDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHT---RDW 615
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D L+ELA + GA+++ + A CA+ R + + K+++D L +
Sbjct: 616 NPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLD---LSSI 672
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLSRGI--LNWGTPVQECLEA-GRIFIQ---Q 170
I+ DF A++ I PA + S LS + L T V + LEA R+F +
Sbjct: 673 NISAKDFEVAMQKMI-PASQRAVTSPGQALSTVVKPLLQNT-VDKILEALQRVFPHAEFR 730
Query: 171 SKDTESSGLVSVLLEVDKVPTDE 193
+ T S + LLE D +D+
Sbjct: 731 TNKTLDSDISCPLLESDLAYSDD 753
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 527 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPAL 584
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 585 RRPGRFD 591
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 188 (71.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 282 LDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 339
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 340 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRR 375
Score = 119 (46.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DE+DAI R G+ V T++ +LL+++DG + + VI TNR D++D
Sbjct: 247 IIFIDELDAIGNKRFDSEKAGDREVQRTML-ELLNQLDGFQPTTQVKVIAATNRVDILDP 305
Query: 346 ALLRPGRLE 354
ALLR GRL+
Sbjct: 306 ALLRSGRLD 314
Score = 37 (18.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 168 IQQSKDTESSGLVSVLLEVDKVPTDELS 195
I ++ TE V + EVD+ PT++ S
Sbjct: 125 ILETLPTEYDSRVKAM-EVDERPTEQYS 151
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 187 (70.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 263 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 320
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 321 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 356
Score = 116 (45.9 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DE+DAI R G+ V T++ +LL+++DG + + VI TNR D++D
Sbjct: 228 IIFIDELDAIGTKRFDSEKAGDREVQRTML-ELLNQLDGFQPNTQVKVIAATNRVDILDP 286
Query: 346 ALLRPGRLE 354
ALLR GRL+
Sbjct: 287 ALLRSGRLD 295
Score = 37 (18.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 168 IQQSKDTESSGLVSVLLEVDKVPTDELS 195
I ++ TE V + EVD+ PT++ S
Sbjct: 106 ILETLPTEYDSRVKAM-EVDERPTEQYS 132
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 196 (74.1 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 51/138 (36%), Positives = 76/138 (55%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VIG TNR D ID AL RPGR + + LPN +GR IL IHT
Sbjct: 702 MDGMDGRGQVIVIGATNRPDSIDPALRRPGRFDREFYFPLPNTEGRRAILDIHTKGWDP- 760
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
L + + ELA +TK + GA+L L A A+ R + K+ K+ +DP+ +E
Sbjct: 761 -PLPNSIK-DELAEITKGYGGADLRALCTEAALNAVQRRYPQIYKSDKKLLIDPRTIE-- 816
Query: 117 CITRADFLHALETDIKPA 134
+ DF+ A++ +I P+
Sbjct: 817 -VAPKDFMLAIK-NITPS 832
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 276 IILEAGPNSGLHIIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
++ E + II FDEID + R + +H ++V+ LL+ MDG++ ++VIG
Sbjct: 658 LLFEEARKTQPSIIFFDEIDGLAPVRSSK--QEQIHASIVSTLLALMDGMDGRGQVIVIG 715
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D ID AL RPGR +
Sbjct: 716 ATNRPDSIDPALRRPGRFD 734
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 267 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 324
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 325 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 360
>RGD|1304849 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 RGD:1304849 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OrthoDB:EOG441Q9S
GeneTree:ENSGT00550000074694 IPI:IPI00557599
Ensembl:ENSRNOT00000008508 UCSC:RGD:1304849 ArrayExpress:D3ZJD2
Uniprot:D3ZJD2
Length = 1373
Score = 195 (73.7 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 51/138 (36%), Positives = 78/138 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + SLP++D R +IL+IHT R +
Sbjct: 544 MDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHT---RDW 600
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D+ L+ELA + GA+++ + A CA+ R + + K+++D L +
Sbjct: 601 NPKPVDMFLEELAENCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLD---LSSI 657
Query: 117 CITRADFLHALETDIKPA 134
I+ DF A++ I PA
Sbjct: 658 NISAKDFETAMQKII-PA 674
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 187 (70.9 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 275 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 332
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 333 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 368
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 187 (70.9 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 43/106 (40%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E NI VI TNR D++D+ALLRPGR++ ++E PNE+ R+ IL+IH+ KM
Sbjct: 273 LDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN-- 330
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L +NL+++A SGAE++G+ A A+ R + T +
Sbjct: 331 --LTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQE 374
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 288 IIIFDEIDAICKARGTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEID+I AR G G++ V T++ +LL+++DG E NI VI TNR D++D+A
Sbjct: 239 IIFMDEIDSIGSARLETGTGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDVLDQA 297
Query: 347 LLRPGRLE 354
LLRPGR++
Sbjct: 298 LLRPGRID 305
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 192 (72.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 40/107 (37%), Positives = 64/107 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + + ++V+G TNR D++D AL RPGR + + + P++ GR IL++H +K
Sbjct: 460 MDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKEL- 518
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVE 107
L DDVNL +A++T F+GA+L LV A A + +K++
Sbjct: 519 -PLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKID 564
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKARGTAGG--NTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDA+ K+R + + +NQLL++MDG + + ++V+G TNR D++D
Sbjct: 424 IIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDP 483
Query: 346 ALLRPGRLE 354
AL RPGR +
Sbjct: 484 ALRRPGRFD 492
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 190 (71.9 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 45/101 (44%), Positives = 63/101 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +++I TNR D++D ALLRPGR + Q+ IS+P+ +GR +I+ +H K+
Sbjct: 288 MDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKV--- 344
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIK 101
LA DV+L+ +A T FSGA+L LV A A RL K
Sbjct: 345 -PLAPDVDLRVIARGTPGFSGADLANLVNEAALIAA-RLDK 383
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
+ E G II DEIDA+ + RG GG + +NQLL +MDG E +++I
Sbjct: 242 MFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIA 301
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 302 ATNRPDVLDPALLRPGRFD 320
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 190 (71.9 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 45/101 (44%), Positives = 63/101 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +++I TNR D++D ALLRPGR + Q+ IS+P+ +GR +I+ +H K+
Sbjct: 288 MDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKV--- 344
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIK 101
LA DV+L+ +A T FSGA+L LV A A RL K
Sbjct: 345 -PLAPDVDLRVIARGTPGFSGADLANLVNEAALIAA-RLDK 383
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
+ E G II DEIDA+ + RG GG + +NQLL +MDG E +++I
Sbjct: 242 MFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIA 301
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 302 ATNRPDVLDPALLRPGRFD 320
>ZFIN|ZDB-GENE-030131-5754 [details] [associations]
symbol:wu:fi16e04 "wu:fi16e04" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00674
PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-030131-5754 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01038330
IPI:IPI00901018 Ensembl:ENSDART00000111963 Uniprot:E7EXJ5
Length = 1358
Score = 194 (73.4 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VIG TNR D ID AL RPGR + + +LP+ + R IL+IHT R +
Sbjct: 523 MDGLDSRGEVVVIGATNRLDSIDPALRRPGRFDREFLFNLPDREARKDILKIHT---RHW 579
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D L+ELA + G +++ + A CA+ R + ++ K+ +D +E +
Sbjct: 580 DPQLSDAFLEELADKCVGYCGTDIKAVCAEAALCALRRRYPQIYASSQKLLLD---VESI 636
Query: 117 CITRADFLHALETDIKPA 134
C++ DFL A+ I PA
Sbjct: 637 CVSGRDFLSAMRK-IVPA 653
Score = 148 (57.2 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID I R + +H ++V+ LL+ MDG++ ++VIG TNR D ID AL
Sbjct: 491 IIFFDEIDGIAPVRSSRQDQ--IHSSIVSTLLALMDGLDSRGEVVVIGATNRLDSIDPAL 548
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 549 RRPGRFD 555
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 187 (70.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 317 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 374
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 375 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 410
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 187 (70.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 317 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 374
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 375 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 410
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 187 (70.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 317 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 374
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 375 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 410
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 187 (70.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 320 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 377
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 378 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 413
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 187 (70.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 320 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 377
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 378 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 413
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 187 (70.9 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 324 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 381
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 382 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 417
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 190 (71.9 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 42/109 (38%), Positives = 62/109 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E ++V+ TNR D++D ALLRPGR + Q+ + +P+ GR IL++H+
Sbjct: 350 MDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGN---- 405
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVD 109
KK V+L+ +A T FSGA+L L+ A A R A + E+D
Sbjct: 406 KKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEID 454
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RGT GG + +NQLL++MDG E ++V+ TNR D++D A
Sbjct: 315 IVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSA 374
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 375 LLRPGRFD 382
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 174 (66.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 42/104 (40%), Positives = 60/104 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+E+ + ++++ TNR D +D ALLRPGRL+ + + LP E R IL++ T KM
Sbjct: 588 LDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKM--- 644
Query: 61 KKLADDVN-LKELAALTKNFSGAELEGLVRAAQSCAMNRLIKAT 103
K D V + +L T +SGAEL + R A AM I AT
Sbjct: 645 -KFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRESIDAT 687
Score = 170 (64.9 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 32/67 (47%), Positives = 51/67 (76%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDEIDA+ +RG+ ++GV D V+ QLL+++DG+E+ + ++++ TNR D +D AL
Sbjct: 555 IVFFDEIDAVGSSRGSEK-SSGVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSAL 613
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 614 LRPGRLD 620
Score = 65 (27.9 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 18/62 (29%), Positives = 37/62 (59%)
Query: 31 RLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRA 90
R ++ EI++P +D R+ IL +K+ + +++L ++A T F+G +L L++A
Sbjct: 367 RFPIEAEITVPTQDERLDIL----SKIGNIYNFPLELHL-DVARHTHGFTGGDLCSLLKA 421
Query: 91 AQ 92
A+
Sbjct: 422 AK 423
Score = 37 (18.1 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 6/32 (18%), Positives = 17/32 (53%)
Query: 259 VKPFFFNPKNTSEFLCTIILEAGPNSGLHIII 290
++ + +P E C++++ P SG +++
Sbjct: 258 LEDYVISPVRQKESPCSVLIWGLPGSGKTLLL 289
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 187 (70.9 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 334 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 391
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 392 --VSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRR 427
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 185 (70.2 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 39/91 (42%), Positives = 58/91 (63%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + L+ + +I TNR D++D ALLRPGRL+ ++EI LPNE GRV +L+IH A + +
Sbjct: 268 MDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKH 327
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAA 91
DV+ + +A L F+ A+L + A
Sbjct: 328 ----GDVDYEAIAKLADGFNAADLRNVCTEA 354
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
+I DEIDAI R + G + + T++ +LL++MDG + L+ + +I TNR D++D
Sbjct: 233 VIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMDGFDTLSKVKIIMATNRPDVLDP 291
Query: 346 ALLRPGRLE 354
ALLRPGRL+
Sbjct: 292 ALLRPGRLD 300
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 185 (70.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 40/98 (40%), Positives = 61/98 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 305 LDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN-- 362
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
+ DVN +ELA T +F+GA+ + + A A+ R
Sbjct: 363 --VCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRR 398
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 41/118 (34%), Positives = 73/118 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ +G TNRRD++D ALLRPGR + ++ + PN GR+ IL+IH +K+
Sbjct: 568 LDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKV--- 624
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCI 118
K++D V+L A+ +SGA+L LV+ A A+ + + + ++D A+++L +
Sbjct: 625 -KMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMD-DAVDRLTV 680
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 288 IIIFDEIDAICKAR-GTAGGN--------TGVHDTVVNQLLSKMDGVERLNNILVIGMTN 338
+I DEIDA+ R G N T +T +NQLL ++DG + ++ +G TN
Sbjct: 525 VIFIDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATN 584
Query: 339 RRDMIDEALLRPGRLE 354
RRD++D ALLRPGR +
Sbjct: 585 RRDLLDPALLRPGRFD 600
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 179 (68.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVER-LNNILVIGMTNRRDMIDEA 346
+I FDEID++ RG G + GV D +V+QLL+++DG+ + + VIG TNR D++DEA
Sbjct: 827 VIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEA 886
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 887 LLRPGRFD 894
Score = 156 (60.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 41/108 (37%), Positives = 62/108 (57%)
Query: 1 MDGVER-LNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGR-VQILQIHTAKMR 58
+DG+ + + VIG TNR D++DEALLRPGR + + + +P+ D + + IL+ T K
Sbjct: 861 LDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKF- 919
Query: 59 SYKKLADDVNLKELAALTK-NFSGAELEGLVRAAQSCAMNRLIKATNK 105
L +DV L ELA L N++GA+ L A AM+R+ + K
Sbjct: 920 ---VLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMSRIARMVEK 964
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 25/122 (20%), Positives = 53/122 (43%)
Query: 13 IGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQ----IHTAKMRSYKKLA---- 64
+G N D + + R E+ + + P+E R++I Q H +K+
Sbjct: 593 VGSVNNIDNVPSSFRSHMRFEILVPV--PSEAQRLRIFQWYLSSHELNRDVQQKVPVSYM 650
Query: 65 DDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITRADFL 124
D+++ L++ + + +++ +V A+ A R + + K PQ++ IT+ D
Sbjct: 651 DNISFSSLSSYSAGLTPLDIKSIVETARMTATARFYQESKKCGWLPQSI---LITQEDLS 707
Query: 125 HA 126
A
Sbjct: 708 KA 709
>UNIPROTKB|I3LNW0 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GeneTree:ENSGT00570000079239 EMBL:FP340281
Ensembl:ENSSSCT00000027577 OMA:KQEMARH Uniprot:I3LNW0
Length = 151
Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG+E + ++ TNR D+ID A+LRPGRL+ + + LP R+ IL+ T K +
Sbjct: 1 MDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTIT-KNGTK 59
Query: 61 KKLADDVNLKELAALTKN--FSGAELEGLVRAAQSCAMNR 98
L DVNL+ LA + ++GA+L LVR A CA+ +
Sbjct: 60 PPLDADVNLEALAGDLRCDCYTGADLSALVREASICALKQ 99
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 188 (71.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 46/125 (36%), Positives = 76/125 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + ++V+G TNRRD +D+ALLRPGR ++++ +S P+ GR +IL ++ K+
Sbjct: 428 MDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKI--- 484
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLV-----RAA----QSCAMNRLIKATNKVEVDPQ 111
L D+++L LA T F+GA+LE ++ RAA ++ +M L A +KV + P+
Sbjct: 485 --LHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPE 542
Query: 112 ALEKL 116
+L
Sbjct: 543 RKARL 547
Score = 148 (57.2 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
+I DEID++ R + + + T+ NQLLS+MDG + ++V+G TNRRD +D+AL
Sbjct: 395 VIFIDEIDSVGAKRTNSVLHPYANQTI-NQLLSEMDGFHQNAGVIVLGATNRRDDLDQAL 453
Query: 348 LRPGRLEV 355
LRPGR +V
Sbjct: 454 LRPGRFDV 461
Score = 41 (19.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 100 IKATNKVEVDPQALEKLCITRADFLHALET--DIKPA--FGSSDESLEHF---LSRGILN 152
I+ N+VEVDP E++ +T D E ++K F S E + L +G+L
Sbjct: 282 IQLGNQVEVDP---EEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLL 338
Query: 153 WGTP 156
G P
Sbjct: 339 VGPP 342
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 48/109 (44%), Positives = 65/109 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + +++VI TNR D++D ALLRPGR + ++ + P+ GR IL+IH AK
Sbjct: 289 MDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAILKIH-AKG--- 344
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAM--NRLIKATNKVE 107
K LAD VNL+ LA T FSGA+L L+ A A NR + T +E
Sbjct: 345 KPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLE 393
Score = 152 (58.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEIDA+ + RG GG + +NQ+L +MDG + +++VI TNR D++D A
Sbjct: 254 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPA 313
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 314 LLRPGRFD 321
Score = 39 (18.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 179 LVSVLLEVDKVPTDELSLSNFAAANKD----DFVEDTKHIEVTTGPG 221
+ S L+ + P +E+ LS +++ + D+++IEVTT G
Sbjct: 26 IFSFLVPNSQKP-EEVPLSQIITLSQEHKIAEITVDSENIEVTTTDG 71
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 186 (70.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 43/116 (37%), Positives = 66/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG I++I TNR D++D ALLRPGR + Q+ + P+ GR +L++H
Sbjct: 291 MDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARN---- 346
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
K L + VNLK +A T FSGA+LE L+ A A + K + ++D +A +++
Sbjct: 347 KPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDID-EATDRV 401
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
+I DEIDA+ + RG GG + +NQLL +MDG I++I TNR D++D A
Sbjct: 256 LIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPA 315
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 316 LLRPGRFD 323
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 186 (70.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/109 (42%), Positives = 62/109 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E I+VI TNR D++D ALLRPGR + Q+ + LP+ GR QIL++H K+
Sbjct: 287 MDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQILKVHMRKV--- 343
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAM--NRLIKATNKVE 107
L++DV +A T FSGA+L LV A A NR + + E
Sbjct: 344 -PLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNRRVVGMEEFE 391
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
+ E S II DEIDA+ + RG GG + +NQ+L +MDG E I+VI
Sbjct: 241 MFEQAKKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIA 300
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 301 ATNRPDVLDSALLRPGRFD 319
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 181 (68.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ RG +G + GV D VV+QLL+++DG+ ++ VIG TNR D++D AL
Sbjct: 799 IIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 858
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 859 LRPGRFD 865
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/145 (31%), Positives = 77/145 (53%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ ++ VIG TNR D++D ALLRPGR + + + + NED R L++ +A R +
Sbjct: 833 LDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGV-NED-RASQLRVLSAITRKF 890
Query: 61 KKLADDVNLKE-LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCIT 119
+ L V+L + L +GA+L L A + A+ R ++ + ++P + L +T
Sbjct: 891 R-LEPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKRRVRDLEE-GLEPGS-SALLLT 947
Query: 120 RADFLHALETDIKPAFGSSDESLEH 144
D L A ++P+ S E L +
Sbjct: 948 MEDLLQAAAR-LQPSV-SEQELLRY 970
Score = 52 (23.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 35 QMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSC 94
++E+ + E R+ +L+ TA + L +VNL +LA F +L L+ +
Sbjct: 590 ELEVPVLAEAQRLSVLRALTAHL----PLGQEVNLAQLARRCAGFVVGDLFALLTHSSRA 645
Query: 95 AMNRL 99
A R+
Sbjct: 646 ACTRI 650
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 185 (70.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 41/116 (35%), Positives = 68/116 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG I++I TNR D++D ALLRPGR + Q+ + P+ +GR +L++H
Sbjct: 292 MDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHARN---- 347
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
K L +++NL+ +A T FSGA+LE L+ A A + K + ++D +A +++
Sbjct: 348 KPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSDID-EATDRV 402
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEIDA+ + RG GG + +NQLL +MDG I++I TNR D++D A
Sbjct: 257 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPA 316
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 317 LLRPGRFD 324
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 181 (68.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 47/123 (38%), Positives = 72/123 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG + L + +I TNR D +D ALLRPGRL+ ++EI LPNE R++IL+IH K+ +
Sbjct: 272 MDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKH 331
Query: 61 KKLADDVNLKELAALTKNFSGAELE------GL--VRAAQSCAMNR-LIKATNKVEVDPQ 111
+++ + + L+ NF+GA+L GL +RA + + +KA KV D +
Sbjct: 332 ----GEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFMKAVRKVS-DNK 386
Query: 112 ALE 114
LE
Sbjct: 387 KLE 389
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R + G + + T++ +LL++MDG + L + +I TNR D +D
Sbjct: 237 IIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMDGFDSLGQVKMIMATNRPDSLDP 295
Query: 346 ALLRPGRLE 354
ALLRPGRL+
Sbjct: 296 ALLRPGRLD 304
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 186 (70.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 40/116 (34%), Positives = 66/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG N++V+ TNR D++D AL+RPGR + Q+ I P+ GR I ++H ++
Sbjct: 433 MDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLE 492
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
+L + +++AALT FSGA++ + A A L A N+ + QA+E++
Sbjct: 493 AELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDAINQKHFE-QAIERV 547
Score = 147 (56.8 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG G + +NQLL +MDG N++V+ TNR D++D A
Sbjct: 398 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPA 457
Query: 347 LLRPGRLE 354
L+RPGR +
Sbjct: 458 LMRPGRFD 465
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 185 (70.2 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 47/115 (40%), Positives = 70/115 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQ-IHTAKMRS 59
MDG E L+ + ++ T+R D+ID ALLRPGRL+ + ++P E R+ ILQ I +K +
Sbjct: 825 MDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKD 884
Query: 60 --YKKLADDVN--LKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP 110
KK A + N LK +A T FSGA+L+GL A +++R + A ++ EV P
Sbjct: 885 TGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHRWLSAADQSEVVP 939
Score = 180 (68.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE D+I RG +TGV D VVNQLL++MDG E L+ + ++ T+R D+ID AL
Sbjct: 793 ILFFDEFDSIAPKRGH--DSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSAL 850
Query: 348 LRPGRLEVSEI 358
LRPGRL+ S I
Sbjct: 851 LRPGRLDKSVI 861
Score = 52 (23.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 41 PNEDGRVQILQIHTAKMRSYKKLADDVNLKELAALTKNFSGAELE 85
P++ R ++L+ +K KL D+ +L+ T+ FS +LE
Sbjct: 603 PDKHARAKLLEYFFSK-NQIMKLNRDLQFSDLSLETEGFSPLDLE 646
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 184 (69.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 46/116 (39%), Positives = 67/116 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E I+VI TNR D++D ALLRPGR + Q+ + LP+ GR QIL++H ++
Sbjct: 282 MDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRV--- 338
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
LA D++ +A T FSGA+L LV A A + + VE + +A +K+
Sbjct: 339 -PLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFE-KAKDKI 392
Score = 155 (59.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEIDA+ + RG GG + +NQ+L +MDG E I+VI TNR D++D A
Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPA 306
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 307 LLRPGRFD 314
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 188 (71.2 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 52/145 (35%), Positives = 80/145 (55%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VIG TNR D +D AL RPGR + + LP+ R +ILQI T K S
Sbjct: 546 MDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSS- 604
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
L+ + + +LA LTK + GA+L L A ++ R + ++ +K+ VDP K+
Sbjct: 605 -PLSTNF-IDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQIYRSNDKLLVDPS---KI 659
Query: 117 CITRADFLHALETDIKPAFGSSDES 141
+ +DF+ AL+ I P+ S S
Sbjct: 660 KVKVSDFMLALKK-IVPSSARSTGS 683
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ ++VIG TNR D +D AL
Sbjct: 514 IIFFDEIDGLAPVRSSK--QEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPAL 571
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 572 RRPGRFD 578
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 181 (68.8 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 39/98 (39%), Positives = 61/98 (62%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D++D ALLR GRL+ ++E +PNE+ R +I+QIH+ KM
Sbjct: 312 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQIHSRKMN-- 369
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
++ DVN +ELA +F+GA+ + + A A+ R
Sbjct: 370 --VSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRR 405
>POMBASE|SPCC553.03 [details] [associations]
symbol:pex1 "AAA family ATPase Pex1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
SMART:SM00382 PomBase:SPCC553.03 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464
GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12 PIR:T41400
RefSeq:NP_587770.1 ProteinModelPortal:O74941
EnsemblFungi:SPCC553.03.1 GeneID:2539405 KEGG:spo:SPCC553.03
OrthoDB:EOG4TQQJ3 NextBio:20800569 Uniprot:O74941
Length = 937
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 42/110 (38%), Positives = 67/110 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E L+ + ++ T R DMID ALLRPGRL+ + LPNE+ R+++LQ K+ +
Sbjct: 734 MDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQ----KLANR 789
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDP 110
+ + LK+L+ LT ++ A+L L+ A A+++L+K + VDP
Sbjct: 790 FHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVSINAVDP 839
Score = 176 (67.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
++ FDE D++ RG +TGV D VVNQ+L++MDG E L+ + ++ T R DMID AL
Sbjct: 702 VLFFDEFDSVAPRRGQ--DSTGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPAL 759
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 760 LRPGRLD 766
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 41/116 (35%), Positives = 65/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG N++++ TNR D++D ALLRPGR + Q+ I P+ GR I ++H ++
Sbjct: 437 MDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLD 496
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L D ++LA+LT FSGA++ + A A L A N+ + QA+E++
Sbjct: 497 SALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFE-QAIERV 551
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG G + +NQLL +MDG N++++ TNR D++D A
Sbjct: 402 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 461
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 462 LLRPGRFD 469
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 41/116 (35%), Positives = 65/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG N++++ TNR D++D ALLRPGR + Q+ I P+ GR I ++H ++
Sbjct: 437 MDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLD 496
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L D ++LA+LT FSGA++ + A A L A N+ + QA+E++
Sbjct: 497 SALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFE-QAIERV 551
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG G + +NQLL +MDG N++++ TNR D++D A
Sbjct: 402 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 461
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 462 LLRPGRFD 469
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 181 (68.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 42/98 (42%), Positives = 58/98 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + I V+ TNR D++D ALLR GRL+ ++E LPNE+ R ILQIH+ KM
Sbjct: 342 LDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIHSRKMT-- 399
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
+ D VN ELA T F GA+L+ + A A+ +
Sbjct: 400 --VEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRK 435
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 187 (70.9 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 63/211 (29%), Positives = 106/211 (50%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ ++VIG TNR D ID AL RPGR + + LPN++ R +I +IHT R +
Sbjct: 497 MDGLDGRGEVVVIGATNRLDSIDPALRRPGRFDREFLFGLPNKEARKEIFKIHT---RDW 553
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D + ELA + GA+++ L A CA+ R + ++ K+++D +++
Sbjct: 554 TPKLLDTFIDELATECVGYCGADIKSLCAEAALCALRRRYPQIYLSSEKLQLDVNSIK-- 611
Query: 117 CITRADFLHALETDIKPAFGSSDESLEHFLS---RGILNWGTPVQECLEA-GRIF----I 168
I DF+ A++ + PA + S LS + +L G + L+A R+F +
Sbjct: 612 -IKAKDFVMAMQKTV-PASQRAVPSPGRALSPVMKPLL--GNTLLRILQALQRVFPHAEL 667
Query: 169 QQSKDTESSGLVSVLLEVDKVPTDELSLSNF 199
KD + G + +L+ D + + S S F
Sbjct: 668 AMKKD-QQQGSSNPILKDDTIDRSDESPSIF 697
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ ++VIG TNR D ID AL
Sbjct: 465 IIFFDEIDGLAPVRSSKQDQ--IHSSIVSTLLALMDGLDGRGEVVVIGATNRLDSIDPAL 522
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 523 RRPGRFD 529
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 180 (68.4 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 41/98 (41%), Positives = 59/98 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG I VI TNR D++D AL+R GRL+ ++E P E+ R +ILQIH+ KM +
Sbjct: 302 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 361
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
DVN +ELA T +F+GA+L+ + A A+ R
Sbjct: 362 P----DVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 395
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R G+ V T++ +LL+++DG I VI TNR D++D
Sbjct: 267 IIFIDEIDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDERIKVIAATNRADILDP 325
Query: 346 ALLRPGRLE 354
AL+R GRL+
Sbjct: 326 ALMRSGRLD 334
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 183 (69.5 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E I+VI TNR D++D ALLRPGR + Q+ + LP+ GR QIL++H K+
Sbjct: 286 MDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKV--- 342
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAA 91
LA+DV +A T FSGA+L LV A
Sbjct: 343 -PLANDVEPSLIARGTPGFSGADLANLVNEA 372
Score = 155 (59.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEIDA+ + RG GG + +NQ+L +MDG E I+VI TNR D++D A
Sbjct: 251 IIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPA 310
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 311 LLRPGRFD 318
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 142 LEHFLSRGILNWGTPVQECLEAGRIFI 168
L+ +++ + GTP +E G IFI
Sbjct: 82 LDDLINQDVKVQGTPPEEQSLLGTIFI 108
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 183 (69.5 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E I+VI TNR D++D ALLRPGR + Q+ + LP+ GR QIL++H K+
Sbjct: 286 MDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKV--- 342
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAA 91
LA+DV +A T FSGA+L LV A
Sbjct: 343 -PLANDVEPSLIARGTPGFSGADLANLVNEA 372
Score = 155 (59.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEIDA+ + RG GG + +NQ+L +MDG E I+VI TNR D++D A
Sbjct: 251 IIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPA 310
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 311 LLRPGRFD 318
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 142 LEHFLSRGILNWGTPVQECLEAGRIFI 168
L+ +++ + GTP +E G IFI
Sbjct: 82 LDDLINQDVKVQGTPPEEQSLLGTIFI 108
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 180 (68.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 41/106 (38%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 314 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 371
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L EL + SGA+++ + A A+ R +K TN+
Sbjct: 372 --LADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 415
Score = 122 (48.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 279 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 337
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 338 ALIRPGRID 346
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 91 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 136
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 180 (68.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + + VI TNR D +D ALLR GRL+ ++E LPNE+ RV IL+IH+ KM
Sbjct: 316 LDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMA-- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
+ DD+N +ELA T ++GA L+ + A A+ +
Sbjct: 374 --IDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQ 409
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 180 (68.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 41/106 (38%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 315 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 372
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L EL + SGA+++ + A A+ R +K TN+
Sbjct: 373 --LADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 416
Score = 122 (48.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 280 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 338
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 339 ALIRPGRID 347
Score = 47 (21.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 92 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 137
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 180 (68.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 41/106 (38%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L EL + SGA+++ + A A+ R +K TN+
Sbjct: 374 --LADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 128 (50.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 34/91 (37%), Positives = 53/91 (58%)
Query: 266 PKNTSEFLCTIILEAGPNSGLHIIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMD 323
PK E L + E GP+ I+ DEIDAI R +GG + T++ +LL+++D
Sbjct: 264 PKLVRE-LFRVAEEHGPS----IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLD 317
Query: 324 GVERLNNILVIGMTNRRDMIDEALLRPGRLE 354
G + ++ VI TNR + +D AL+RPGR++
Sbjct: 318 GFDSRGDVKVIMATNRIETLDPALIRPGRID 348
Score = 47 (21.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 93 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 138
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 185 (70.2 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 61/202 (30%), Positives = 104/202 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L + V+ T+R D+ID ALLRPGRL+ + P++ R++IL + + +
Sbjct: 646 LDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSL--- 702
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
LADDV+L+ +A++T +F+GA+L+ L+ AQ A++ ++ ++ + + L ++
Sbjct: 703 -PLADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSSDSDLSLSS 761
Query: 121 ADFL-HALETDIKPAFGSS--DESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTE-- 175
FL H+ +D G D+SL IL P + R++ S ++E
Sbjct: 762 MVFLNHSSGSDDSAGDGECGLDQSLVSLEMSEIL----PDESKFNMYRLYFGSSYESELG 817
Query: 176 ---SSGLVSVLLEVDKVPTDEL 194
SS L S L T +L
Sbjct: 818 NGTSSDLSSQCLSAPSSMTQDL 839
Score = 177 (67.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE ++I RG NTGV D VVNQLL+++DGVE L + V+ T+R D+ID AL
Sbjct: 614 ILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 671
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 672 LRPGRLD 678
Score = 49 (22.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 38 ISLPNEDGRVQIL-QIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAM 96
I PN++ R +IL + K+ D++L+ +A T F + LV A +
Sbjct: 415 IQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLVDRAIHSRL 474
Query: 97 NRLIKATNKVEVDPQALEKLCITRADFLHAL 127
+R +T EKL +T DF AL
Sbjct: 475 SRQSISTR---------EKLVLTTLDFQKAL 496
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 180 (68.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D ALLRPGR++ ++E LP+ R +I QIHT+KM
Sbjct: 319 LDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMT-- 376
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNKVEVD-PQALEKLCI 118
LA+DVNL+E FSGA+++ + A A+ R +K T+ VD +A EK+
Sbjct: 377 --LAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH---VDFKKAKEKVMF 431
Query: 119 TRAD 122
+ +
Sbjct: 432 KKKE 435
Score = 122 (48.0 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDA+ R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 284 IVFIDEIDAVGTKRYDANSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDP 342
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 343 ALLRPGRID 351
Score = 43 (20.2 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E D+ D+L + + N ++ + D H V++ G +Y+ L++
Sbjct: 96 EEDRSKVDDLRGTPMSVGNLEELI-DENHAIVSSSVGPEYYVGILSF 141
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 179 (68.1 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 44/132 (33%), Positives = 75/132 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + L + +I TNR D++D ALLRPGRL+ ++EI LPNE R+++L+IH A + +
Sbjct: 271 LDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAKH 330
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL--------VRAAQSCAMNR-LIKATNKVEVDPQ 111
+++ + + L + F+GA+L + +RA + ++ +KA K+ D +
Sbjct: 331 ----GEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFMKAVRKLN-DAK 385
Query: 112 ALEKLCITRADF 123
LE ADF
Sbjct: 386 KLESSAHYSADF 397
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R + G + + T++ +LL+++DG + L + +I TNR D++D
Sbjct: 236 IIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDELGKVKMIMATNRPDVLDP 294
Query: 346 ALLRPGRLE 354
ALLRPGRL+
Sbjct: 295 ALLRPGRLD 303
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 168 (64.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGV----ERLNNILVIGMTNRRDMI 343
++ FDE+D++ RG G + GV D +V+QLL+++DG+ E + VIG TNR D++
Sbjct: 1120 VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLL 1179
Query: 344 DEALLRPGRLE 354
D ALLRPGR +
Sbjct: 1180 DTALLRPGRFD 1190
Score = 121 (47.7 bits), Expect = 0.00084, P = 0.00084
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 3 GVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPN-EDGRVQILQIHTAKMRSYK 61
G E + VIG TNR D++D ALLRPGR + + + + + + + IL+ T K
Sbjct: 1160 GEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFA--- 1216
Query: 62 KLADDVNLKELAA-LTKNFSGAELEGLVRAAQSCAMNRLIKAT 103
LA D++L ++ L ++GA+L L A A+ R KAT
Sbjct: 1217 -LAPDLSLARVSERLPLTYTGADLYALCSDAMLKAITR--KAT 1256
Score = 67 (28.6 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 11 LVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVNLK 70
++I T + I EA+ + E++ P E R IL+ + RS K LA DV+L
Sbjct: 878 VIIATTTDVEQIPEAIR--SMFTHEFELTAPEEKEREGILR-NAVSERSIK-LAPDVDLG 933
Query: 71 ELAALTKNFSGAELEGLV-RA--AQSCAMNRLIKATNK 105
+A T +L +V RA A+S + +L ++ +K
Sbjct: 934 TVALKTAALVAGDLVDVVERASVARSTRLEKLAESASK 971
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 183 LLEVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTT 218
L +V + D+ S F +A +D V+D+ +E T+
Sbjct: 298 LKQVAEDEADDTSNEQFYSAAEDKPVDDSTEMESTS 333
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 186 (70.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 59/209 (28%), Positives = 106/209 (50%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L + V+ T+R D+ID ALLRPGRL+ + P++ R++IL + +A +
Sbjct: 972 LDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSASL--- 1028
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
LA+DV+L+ +A+LT +F+GA+L+ L+ AQ A++ + + + + L ++
Sbjct: 1029 -PLAEDVDLQHVASLTDSFTGADLKALLYNAQLEALHGRLLSCGLQDGGSSSDSDLSLSS 1087
Query: 121 ADFL-HALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTESSGL 179
FL H+ +D + G + L+ L ++ P + + R++ S ++E
Sbjct: 1088 MVFLNHSSGSD--DSAGDGEYGLDQSLVSLEMSEVLPDESKINMYRLYFGSSYESELGNG 1145
Query: 180 VSVLLEVDKVPTDELSLSNFAAA-NKDDF 207
S L + +F A KD F
Sbjct: 1146 TSSDLSSQCLSAPSSITQDFPGAPGKDQF 1174
Score = 177 (67.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE ++I RG NTGV D VVNQLL+++DGVE L + V+ T+R D+ID AL
Sbjct: 940 ILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 997
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 998 LRPGRLD 1004
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 46/122 (37%), Positives = 71/122 (58%)
Query: 9 NILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSYKKLADDVN 68
+ILV+ TNR DMID+ALLRPGR + + + P+E R+ +L++H+ +M + ++V
Sbjct: 612 HILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPFH----ENVF 667
Query: 69 LKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITRADFLHALE 128
L+E+AA T +SGA+L L A A R KAT E++ Q EK+ + L +
Sbjct: 668 LQEIAARTDRYSGADLCNLCNEAAIEAFQRDFKAT---EIELQDFEKVLTKQKSSLTQSQ 724
Query: 129 TD 130
D
Sbjct: 725 ID 726
Score = 129 (50.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 272 FLCTIILEAGPNSGLHIIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVE--- 326
F+ I A N+ +I DEID++ R + G G V +++ LL++M+G+
Sbjct: 550 FISRIFDTARKNAPC-LIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGIVGGG 608
Query: 327 RLNNILVIGMTNRRDMIDEALLRPGRLE 354
+ILV+ TNR DMID+ALLRPGR +
Sbjct: 609 SQQHILVVAATNRPDMIDDALLRPGRFD 636
>UNIPROTKB|E9PSU0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 RGD:1566199 IPI:IPI00476926
Ensembl:ENSRNOT00000006877 ArrayExpress:E9PSU0 Uniprot:E9PSU0
Length = 1458
Score = 186 (70.5 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG++ I+VIG TNR D ID AL RPGR + + +LP++ R ILQIHT R +
Sbjct: 530 MDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQRARKHILQIHT---RDW 586
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR----LIKATNKVEVDPQALEKL 116
D L ELA + GA+++ L A A+ R + +++K+++D + +
Sbjct: 587 NPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQIYASSHKLQLD---VSSI 643
Query: 117 CITRADFLHALETDIKPA 134
++ DF A++ +I PA
Sbjct: 644 VLSAQDFYRAMQ-NIVPA 660
Score = 148 (57.2 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDEID + R + +H ++V+ LL+ MDG++ I+VIG TNR D ID AL
Sbjct: 498 IIFFDEIDGLAPVRSSRQDQ--IHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPAL 555
Query: 348 LRPGRLE 354
RPGR +
Sbjct: 556 RRPGRFD 562
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 178 (67.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 46/135 (34%), Positives = 74/135 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + L + VI TNR D +D ALLRPGRL+ ++EI LPNE R++IL+IH+ K+ +
Sbjct: 281 LDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKH 340
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+++ + + L+ FS A+L + A A I+A + +D ++ + +
Sbjct: 341 ----GEIDFEAVVKLSDGFSAADLRNVCTEAGMFA----IRAEREFVIDEDFMK--AVRK 390
Query: 121 ADFLHALET--DIKP 133
LET D KP
Sbjct: 391 VGDAKRLETKLDYKP 405
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R + G + + T++ +LL+++DG + L + VI TNR D +D
Sbjct: 246 IVFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDSLGKVKVIMATNRPDTLDP 304
Query: 346 ALLRPGRLE 354
ALLRPGRL+
Sbjct: 305 ALLRPGRLD 313
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 178 (67.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 46/135 (34%), Positives = 74/135 (54%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + L + VI TNR D +D ALLRPGRL+ ++EI LPNE R++IL+IH+ K+ +
Sbjct: 281 LDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKH 340
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
+++ + + L+ FS A+L + A A I+A + +D ++ + +
Sbjct: 341 ----GEIDFEAVVKLSDGFSAADLRNVCTEAGMFA----IRAEREFVIDEDFMK--AVRK 390
Query: 121 ADFLHALET--DIKP 133
LET D KP
Sbjct: 391 VGDAKRLETKLDYKP 405
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R + G + + T++ +LL+++DG + L + VI TNR D +D
Sbjct: 246 IVFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDSLGKVKVIMATNRPDTLDP 304
Query: 346 ALLRPGRLE 354
ALLRPGRL+
Sbjct: 305 ALLRPGRLD 313
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 177 (67.4 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 243 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 300
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L +L + SGA+++ + A A+ R +K TN+
Sbjct: 301 --LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 344
Score = 122 (48.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 208 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 266
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 267 ALIRPGRID 275
Score = 47 (21.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 20 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 65
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 185 (70.2 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 61/202 (30%), Positives = 104/202 (51%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L + V+ T+R D+ID ALLRPGRL+ + P++ R++IL + + +
Sbjct: 968 LDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSL--- 1024
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCITR 120
LADDV+L+ +A++T +F+GA+L+ L+ AQ A++ ++ ++ + + L ++
Sbjct: 1025 -PLADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSSDSDLSLSS 1083
Query: 121 ADFL-HALETDIKPAFGSS--DESLEHFLSRGILNWGTPVQECLEAGRIFIQQSKDTE-- 175
FL H+ +D G D+SL IL P + R++ S ++E
Sbjct: 1084 MVFLNHSSGSDDSAGDGECGLDQSLVSLEMSEIL----PDESKFNMYRLYFGSSYESELG 1139
Query: 176 ---SSGLVSVLLEVDKVPTDEL 194
SS L S L T +L
Sbjct: 1140 NGTSSDLSSQCLSAPSSMTQDL 1161
Score = 177 (67.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE ++I RG NTGV D VVNQLL+++DGVE L + V+ T+R D+ID AL
Sbjct: 936 ILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 993
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 994 LRPGRLD 1000
Score = 49 (22.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 38 ISLPNEDGRVQIL-QIHTAKMRSYKKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAM 96
I PN++ R +IL + K+ D++L+ +A T F + LV A +
Sbjct: 737 IQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLVDRAIHSRL 796
Query: 97 NRLIKATNKVEVDPQALEKLCITRADFLHAL 127
+R +T EKL +T DF AL
Sbjct: 797 SRQSISTR---------EKLVLTTLDFQKAL 818
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 178 (67.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 42/106 (39%), Positives = 63/106 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E N I V+ TNR D++D+ALLRPGR++ ++E PNE+ R IL+IH+ KM
Sbjct: 293 LDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMN-- 350
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L ++LK++A SGAEL+ + A A+ R + T +
Sbjct: 351 --LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQE 394
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 33/70 (47%), Positives = 49/70 (70%)
Query: 288 IIIFDEIDAICKAR---GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
II DEID+I AR G+ G++ V T++ +LL+++DG E N I V+ TNR D++D
Sbjct: 257 IIFMDEIDSIGSARMESGSGNGDSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILD 315
Query: 345 EALLRPGRLE 354
+ALLRPGR++
Sbjct: 316 QALLRPGRID 325
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 178 (67.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 42/106 (39%), Positives = 63/106 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG E N I V+ TNR D++D+ALLRPGR++ ++E PNE+ R IL+IH+ KM
Sbjct: 293 LDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMN-- 350
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
L ++LK++A SGAEL+ + A A+ R + T +
Sbjct: 351 --LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQE 394
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 33/70 (47%), Positives = 49/70 (70%)
Query: 288 IIIFDEIDAICKAR---GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMID 344
II DEID+I AR G+ G++ V T++ +LL+++DG E N I V+ TNR D++D
Sbjct: 257 IIFMDEIDSIGSARMESGSGNGDSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILD 315
Query: 345 EALLRPGRLE 354
+ALLRPGR++
Sbjct: 316 QALLRPGRID 325
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 181 (68.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 40/116 (34%), Positives = 65/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG N++++ TNR D++D AL+RPGR + Q+ I P+ GR I ++H ++
Sbjct: 282 MDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLD 341
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L D ++LA+LT FSGA++ + A A L A N+ + QA+E++
Sbjct: 342 TVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFE-QAIERV 396
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG G + +NQLL +MDG N++++ TNR D++D A
Sbjct: 247 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 306
Query: 347 LLRPGRLE 354
L+RPGR +
Sbjct: 307 LMRPGRFD 314
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 182 (69.1 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 40/116 (34%), Positives = 65/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG N++++ TNR D++D ALLRPGR + Q+ I P+ GR I ++H ++
Sbjct: 438 MDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLD 497
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L D ++LA+LT FSGA++ + A A L + N+ + QA+E++
Sbjct: 498 STLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFE-QAIERV 552
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG G + +NQLL +MDG N++++ TNR D++D A
Sbjct: 403 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 462
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 463 LLRPGRFD 470
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 181 (68.8 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 40/116 (34%), Positives = 65/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG N++++ TNR D++D AL+RPGR + Q+ I P+ GR I ++H ++
Sbjct: 438 MDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLD 497
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L D ++LA+LT FSGA++ + A A L A N+ + QA+E++
Sbjct: 498 TVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFE-QAIERV 552
Score = 146 (56.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG G + +NQLL +MDG N++++ TNR D++D A
Sbjct: 403 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 462
Query: 347 LLRPGRLE 354
L+RPGR +
Sbjct: 463 LMRPGRFD 470
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 177 (67.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L +L + SGA+++ + A A+ R +K TN+
Sbjct: 374 --LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 122 (48.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 340 ALIRPGRID 348
Score = 47 (21.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 93 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 138
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 177 (67.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L +L + SGA+++ + A A+ R +K TN+
Sbjct: 374 --LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 122 (48.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 340 ALIRPGRID 348
Score = 47 (21.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 93 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 138
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 177 (67.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L +L + SGA+++ + A A+ R +K TN+
Sbjct: 374 --LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 122 (48.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 340 ALIRPGRID 348
Score = 47 (21.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 93 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 138
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 177 (67.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L +L + SGA+++ + A A+ R +K TN+
Sbjct: 374 --LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 122 (48.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 340 ALIRPGRID 348
Score = 47 (21.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 93 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 138
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 177 (67.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L +L + SGA+++ + A A+ R +K TN+
Sbjct: 374 --LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 122 (48.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 340 ALIRPGRID 348
Score = 47 (21.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 93 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 138
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 177 (67.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I QIHT++M
Sbjct: 316 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT-- 373
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LADDV L +L + SGA+++ + A A+ R +K TN+
Sbjct: 374 --LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 122 (48.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDAI R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 340 ALIRPGRID 348
Score = 47 (21.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + ++ ++D H V+T G HY+ L++
Sbjct: 93 EEERSKVDDLRGTPMSVGTLEEIIDDN-HAIVSTSVGSEHYVSILSF 138
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 176 (67.0 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 44/132 (33%), Positives = 74/132 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + L + +I TNR D++D ALLRPGRL+ ++EI LPNE R+ IL+IH A + +
Sbjct: 270 LDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKH 329
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL--------VRAAQSCAMNR-LIKATNKVEVDPQ 111
+++ + + L + F+GA+L + +RA + ++ +KA K+ + +
Sbjct: 330 ----GEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLS-EAK 384
Query: 112 ALEKLCITRADF 123
LE ADF
Sbjct: 385 KLESSSHYNADF 396
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R + G + + T++ +LL+++DG + L + +I TNR D++D
Sbjct: 235 IIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDNLGKVKMIMATNRPDVLDP 293
Query: 346 ALLRPGRLE 354
ALLRPGRL+
Sbjct: 294 ALLRPGRLD 302
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 41/98 (41%), Positives = 60/98 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + I VI TNR D++D AL+R GRL+ ++E P E+ R +ILQIH+ KM
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMN-- 358
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
+ DVN +ELA T +F+GA+L+ + A A+ R
Sbjct: 359 --VNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 394
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R G+ V T++ +LL+++DG + I VI TNR D++D
Sbjct: 266 IIFIDEIDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDP 324
Query: 346 ALLRPGRLE 354
AL+R GRL+
Sbjct: 325 ALMRSGRLD 333
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 176 (67.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 40/106 (37%), Positives = 65/106 (61%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D AL+RPGR++ ++E LP+E + +I IHT++M
Sbjct: 315 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT-- 372
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATNK 105
LA+DVNL EL + SGA+++ + A A+ R +K TN+
Sbjct: 373 --LAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 416
Score = 121 (47.7 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKAR--GTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDA+ R +GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 280 IVFIDEIDAVGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDVKVIMATNRIETLDP 338
Query: 346 ALLRPGRLE 354
AL+RPGR++
Sbjct: 339 ALIRPGRID 347
Score = 53 (23.7 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E ++ D+L + + N ++ ++D H V+T G HY+ L++
Sbjct: 92 EEERSKVDDLRGTPMSVGNLEEIIDDN-HAIVSTSVGSEHYVSILSF 137
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 179 (68.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
II FDE+D++ RG +G + GV D VV+QLL+++DG+ + VIG TNR D++D AL
Sbjct: 499 IIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSREVFVIGATNRPDLLDPAL 558
Query: 348 LRPGRLE 354
LRPGR +
Sbjct: 559 LRPGRFD 565
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 50/147 (34%), Positives = 77/147 (52%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG+ + VIG TNR D++D ALLRPGR + + + + NED Q LQ+ +A R +
Sbjct: 533 LDGLHSSREVFVIGATNRPDLLDPALLRPGRFDKLVYVGV-NEDRESQ-LQVLSAVTRKF 590
Query: 61 KKLADDVNLKE-LAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKLCIT 119
K L VNL L +GA++ L A CA+ R ++ + +D ++ L +T
Sbjct: 591 K-LDPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIEE-GLDTES-SALILT 647
Query: 120 RADFLHALETDIKPAFGSSDESLEHFL 146
DFL A ++P+ S E L + L
Sbjct: 648 MEDFLQAAAR-LQPSV-SEQELLRYKL 672
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 39/116 (33%), Positives = 65/116 (56%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG N++++ TNR D++D ALLRPGR + Q+ I P+ GR I ++H ++
Sbjct: 230 MDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLD 289
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKATNKVEVDPQALEKL 116
L + ++LA+LT FSGA++ + A A L + N+ + QA+E++
Sbjct: 290 STLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFE-QAIERV 344
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 288 IIIFDEIDAICKARGTAG-GNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
I+ DEIDA+ + RG G + +NQLL +MDG N++++ TNR D++D A
Sbjct: 195 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 254
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 255 LLRPGRFD 262
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/98 (41%), Positives = 57/98 (58%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +++I TNR D++D ALLRPGR + Q+ + P+ GR IL++HT K
Sbjct: 283 MDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREMILKVHTKKT--- 339
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNR 98
LA DV+L +A T FSGA+L +V A A +
Sbjct: 340 -PLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARK 376
Score = 153 (58.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 288 IIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEA 346
II DEIDA+ + RG GG + +NQLL +MDG E +++I TNR D++D A
Sbjct: 248 IIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPA 307
Query: 347 LLRPGRLE 354
LLRPGR +
Sbjct: 308 LLRPGRFD 315
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 182 (69.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 42/101 (41%), Positives = 68/101 (67%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L + V+ T+R D+ID ALLRPGRL+ + P++ R++IL + + +
Sbjct: 967 LDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQASRLEILNVLSESL--- 1023
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLI 100
LADDV+L+ +A+LT +F+GA+L+ L+ AQ A++ RL+
Sbjct: 1024 -PLADDVDLQHVASLTDSFTGADLKALLYGAQLEALHGRLL 1063
Score = 177 (67.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE ++I RG NTGV D VVNQLL+++DGVE L + V+ T+R D+ID AL
Sbjct: 935 ILFFDEFESIAPRRGH--DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 992
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 993 LRPGRLD 999
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 182 (69.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 288 IIIFDEIDAICKARGTAGGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDEAL 347
I+ FDE D+I RG NTGV D VVNQLL+++DGVE L + V+ T+R D+ID AL
Sbjct: 944 IVFFDEFDSIAPRRGH--DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 1001
Query: 348 LRPGRLE 354
LRPGRL+
Sbjct: 1002 LRPGRLD 1008
Score = 174 (66.3 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 41/99 (41%), Positives = 65/99 (65%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DGVE L + V+ T+R D+ID ALLRPGRL+ + P++ R +IL+ + +
Sbjct: 976 LDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQSSRCEILKALSHSL--- 1032
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRL 99
LA+DV+L+ LAA T++F+GA+L+ L+ AQ A++ L
Sbjct: 1033 -SLANDVDLEYLAAKTEHFTGADLKALLYNAQLEAIHNL 1070
Score = 37 (18.1 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 124 LHALETDIKPAFGSSDESLEHFLSRGILNWGTPVQECLEAGRIFIQQS 171
+H L + + FGSS +S S LN + + G +QS
Sbjct: 1067 IHNLSSGLTQDFGSSSDSDFSLSSMVFLNHSSGSDDSAIDGEAAPEQS 1114
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 43/106 (40%), Positives = 63/106 (59%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
MDG E +++I TNR D++D ALLRPGR + Q+ IS+P+ GR +IL++H K+ +
Sbjct: 287 MDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKILEVHLKKIPT- 345
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMNRLIKA-TNK 105
A +V + +A T FSGA+L LV + A R K TN+
Sbjct: 346 ---APNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNE 388
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 277 ILEAGPNSGLHIIIFDEIDAICKARGTA-GGNTGVHDTVVNQLLSKMDGVERLNNILVIG 335
+ E G + +I DEIDA+ + RG GG + +NQLL +MDG E +++I
Sbjct: 241 MFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIA 300
Query: 336 MTNRRDMIDEALLRPGRLE 354
TNR D++D ALLRPGR +
Sbjct: 301 ATNRPDVLDPALLRPGRFD 319
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 41/105 (39%), Positives = 64/105 (60%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG + ++ VI TNR + +D ALLRPGR++ ++E LP+ R +I QIHT+KM
Sbjct: 319 LDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMT-- 376
Query: 61 KKLADDVNLKELAALTKNFSGAELEGLVRAAQSCAMN-RLIKATN 104
L++DVNL+E FSGA+++ + A A+ R +K T+
Sbjct: 377 --LSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 419
Score = 121 (47.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 288 IIIFDEIDAICKARGTA--GGNTGVHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
I+ DEIDA+ R A GG + T++ +LL+++DG + ++ VI TNR + +D
Sbjct: 284 IVFIDEIDAVGTKRYDAHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDP 342
Query: 346 ALLRPGRLE 354
ALLRPGR++
Sbjct: 343 ALLRPGRID 351
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 185 EVDKVPTDELSLSNFAAANKDDFVEDTKHIEVTTGPG-RHYIFTLAY 230
E D+ D+L + + N ++ + D H V++ G +Y+ L++
Sbjct: 96 EEDRSKVDDLRGTPMSVGNLEELI-DENHAIVSSSVGPEYYVGILSF 141
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 174 (66.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 43/132 (32%), Positives = 76/132 (57%)
Query: 1 MDGVERLNNILVIGMTNRRDMIDEALLRPGRLELQMEISLPNEDGRVQILQIHTAKMRSY 60
+DG ++L + +I TNR D++D ALLRPGRL+ ++EI LPNE R++IL+IH + + +
Sbjct: 270 LDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKH 329
Query: 61 KKLADDVNLKELAALTKNFSGAELEGL--------VRAAQSCAMNR-LIKATNKVEVDPQ 111
+++ + + L + F+GA+L + +RA + ++ +KA K+ + +
Sbjct: 330 ----GEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLS-EAK 384
Query: 112 ALEKLCITRADF 123
LE ADF
Sbjct: 385 KLESSSHYNADF 396
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 288 IIIFDEIDAICKARGTAGGNTG--VHDTVVNQLLSKMDGVERLNNILVIGMTNRRDMIDE 345
II DEIDAI R + G + + T++ +LL+++DG ++L + +I TNR D++D
Sbjct: 235 IIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDP 293
Query: 346 ALLRPGRLE 354
ALLRPGRL+
Sbjct: 294 ALLRPGRLD 302
WARNING: HSPs involving 264 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 358 358 0.00081 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 514
No. of states in DFA: 602 (64 KB)
Total size of DFA: 212 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 29.31u 0.09s 29.40t Elapsed: 00:00:17
Total cpu time: 29.38u 0.09s 29.47t Elapsed: 00:00:18
Start: Thu Aug 15 11:55:52 2013 End: Thu Aug 15 11:56:10 2013
WARNINGS ISSUED: 2