BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy363
(59 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28841|NEC2_RAT Neuroendocrine convertase 2 OS=Rattus norvegicus GN=Pcsk2 PE=1 SV=1
Length = 637
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 4 LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK 50
L++ F P G +KEWTLM+HGT+ PY V D SKLA+ KK
Sbjct: 569 LELGFVGSAPQKGLLKEWTLMLHGTQSAPYIDQVVRDYQSKLAMSKK 615
>sp|P21661|NEC2_MOUSE Neuroendocrine convertase 2 OS=Mus musculus GN=Pcsk2 PE=2 SV=1
Length = 637
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 4 LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK 50
L++ F P G +KEWTLM+HGT+ PY V D SKLA+ KK
Sbjct: 569 LELGFVGSAPQKGLLKEWTLMLHGTQSAPYIDQVVRDYQSKLAMSKK 615
>sp|Q5REC2|NEC2_PONAB Neuroendocrine convertase 2 OS=Pongo abelii GN=PCSK2 PE=2 SV=1
Length = 638
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 4 LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK 50
L++ F P G +KEWTLM+HGT+ PY V D SKLA+ KK
Sbjct: 570 LELGFVGSAPQKGVLKEWTLMLHGTQSAPYIDQVVRDYQSKLAMSKK 616
>sp|P16519|NEC2_HUMAN Neuroendocrine convertase 2 OS=Homo sapiens GN=PCSK2 PE=2 SV=2
Length = 638
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 4 LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK 50
L++ F P G +KEWTLM+HGT+ PY V D SKLA+ KK
Sbjct: 570 LELGFVGSAPQKGVLKEWTLMLHGTQSAPYIDQVVRDYQSKLAMSKK 616
>sp|Q03333|NEC2_PIG Neuroendocrine convertase 2 OS=Sus scrofa GN=PCSK2 PE=2 SV=1
Length = 638
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 4 LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK 50
L++ F P G +KEWTLM+HG++ PY V D SKLA+ KK
Sbjct: 570 LELGFVGSAPQKGAVKEWTLMLHGSQSAPYIDQVVRDYQSKLAMSKK 616
>sp|Q9GLR0|NEC2_BOVIN Neuroendocrine convertase 2 OS=Bos taurus GN=PCSK2 PE=2 SV=1
Length = 638
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 4 LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK 50
L++ F P G + EWTLM+HGT+ PY V D SKLA+ KK
Sbjct: 570 LELGFVGSAPQKGVLMEWTLMLHGTQSAPYIDQVVRDYQSKLAMSKK 616
>sp|P51559|BLI4_CAEEL Endoprotease bli-4 OS=Caenorhabditis elegans GN=bli-4 PE=2 SV=2
Length = 943
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 16 GFIKEWTLMIHGTRDPPYSSLPV--SDPHSKLAIVKKAHQ 53
G +WTL+++GT DP S PV + P + ++ + HQ
Sbjct: 614 GTFHDWTLLLYGTADPAQSGDPVYSATPATSQGVLSRVHQ 653
>sp|Q63415|PCSK6_RAT Proprotein convertase subtilisin/kexin type 6 OS=Rattus norvegicus
GN=Pcsk6 PE=2 SV=1
Length = 937
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 15 HGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKKAHQDRLK 57
G +KEW+L+++GT + PY + S++ + Q+ LK
Sbjct: 600 QGKLKEWSLILYGTAEHPYRTFSSHQSRSRMLELSVPEQEPLK 642
>sp|Q9FK91|PARP3_ARATH Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3
PE=2 SV=2
Length = 814
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 16 GFIKEWTLMIHGTRDPPYSSLPVSDP----HSKLAIVKKAHQD 54
G I EW + T+DPP PV P +S ++ + K HQD
Sbjct: 129 GEISEWCSCVFSTKDPPRKEEPVKIPDSVMNSAISDLIKKHQD 171
>sp|P29122|PCSK6_HUMAN Proprotein convertase subtilisin/kexin type 6 OS=Homo sapiens
GN=PCSK6 PE=1 SV=1
Length = 969
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 HGFIKEWTLMIHGTRDPPYSSLPVSDPHSKL 45
G +KEW+L+++GT + PY + S++
Sbjct: 619 QGKLKEWSLILYGTAEHPYHTFSAHQSRSRM 649
>sp|Q6GM16|NXN_XENLA Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1
Length = 414
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 4 LQISFNSQEPNHGFIKEWTLMIHGTRDPPYSSLPVSDPHSKLAIVKK 50
L+I F S +P+ K+W L + +D P+ +LP + H KL + K
Sbjct: 65 LEIVFVSSDPDQ---KKWQLFV---KDMPWLALPYQEKHRKLKLWNK 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,549,020
Number of Sequences: 539616
Number of extensions: 618309
Number of successful extensions: 1284
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1275
Number of HSP's gapped (non-prelim): 12
length of query: 59
length of database: 191,569,459
effective HSP length: 32
effective length of query: 27
effective length of database: 174,301,747
effective search space: 4706147169
effective search space used: 4706147169
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)