Query psy363
Match_columns 59
No_of_seqs 53 out of 55
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 21:37:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy363.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/363hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p8j_A Furin precursor; prohor 96.3 0.0057 1.9E-07 43.9 5.1 30 3-32 441-470 (471)
2 2id4_A Kexin; KEX2, kexin, fur 95.0 0.026 8.8E-07 41.0 4.1 29 3-32 456-484 (503)
3 3hjr_A Extracellular serine pr 94.6 0.049 1.7E-06 39.7 4.8 19 12-30 579-597 (600)
4 2oxa_A Extracellular serine pr 92.3 0.19 6.6E-06 37.0 4.7 18 13-30 580-597 (600)
5 2r0j_A Ubiquitin carrier prote 45.6 19 0.00066 22.0 3.0 19 17-35 29-47 (149)
6 2a7l_A Hypothetical ubiquitin- 44.7 16 0.00056 22.3 2.6 21 16-36 51-71 (136)
7 1z2u_A Ubiquitin-conjugating e 43.7 22 0.00074 21.7 3.0 19 17-35 32-50 (150)
8 2onu_A Ubiquitin-conjugating e 43.0 22 0.00075 21.9 3.0 20 16-35 26-45 (152)
9 1jat_A Ubiquitin-conjugating e 40.9 25 0.00085 21.6 3.0 19 17-35 33-51 (155)
10 2gjd_A Ubiquitin-conjugating e 36.7 32 0.0011 21.2 3.0 20 16-35 36-55 (157)
11 3rcz_B SUMO-conjugating enzyme 36.6 31 0.0011 21.5 3.0 19 17-35 43-61 (163)
12 1jat_B Ubiquitin-conjugating e 36.4 22 0.00075 21.5 2.2 18 18-35 39-56 (138)
13 2bep_A Ubiquitin-conjugating e 35.9 20 0.00068 22.1 1.9 18 18-35 40-57 (159)
14 2fo3_A Ubiquitin-conjugating e 35.4 18 0.00062 21.5 1.6 18 18-35 35-52 (125)
15 2f4z_A Tgtwinscan_2721 - E2 do 34.9 33 0.0011 22.2 3.0 19 17-35 73-91 (193)
16 2aak_A UBC1, ubiquitin conjuga 34.1 37 0.0013 20.6 3.0 20 16-35 31-50 (152)
17 2f4w_A Ubiquitin-conjugating e 33.7 36 0.0012 21.8 3.0 19 17-35 42-60 (187)
18 2grr_A Ubiquitin-conjugating e 33.5 38 0.0013 20.9 3.0 20 16-35 39-58 (161)
19 2h2y_A Ubiquitin-conjugating e 32.7 21 0.00071 21.6 1.6 19 18-36 49-67 (136)
20 1fxt_A Ubiquitin-conjugating e 32.6 23 0.0008 21.5 1.9 19 17-35 30-48 (149)
21 2q0v_A Ubiquitin-conjugating e 32.0 29 0.00098 21.7 2.2 18 18-35 54-71 (156)
22 1i7k_A Ubiquitin-conjugating e 31.7 41 0.0014 21.4 3.0 19 17-35 58-76 (179)
23 4gpr_A Ubiquitin-conjugating e 31.7 21 0.00073 21.8 1.6 20 17-36 32-51 (151)
24 1yrv_A Ubiquitin-conjugating l 30.8 28 0.00097 21.9 2.1 18 18-35 52-69 (169)
25 4fle_A Esterase; structural ge 30.8 24 0.00083 20.5 1.7 10 22-31 140-149 (202)
26 3rz3_A Ubiquitin-conjugating e 29.3 25 0.00085 22.3 1.6 19 17-35 36-54 (183)
27 2e2c_A Ubiquitin conjugating e 29.2 26 0.00088 21.5 1.6 19 17-35 37-55 (156)
28 2a4d_A Ubiquitin-conjugating e 28.9 34 0.0012 21.5 2.2 18 18-35 58-75 (160)
29 2c4o_A Ubiquitin-conjugating e 28.4 27 0.00091 21.9 1.6 19 17-35 47-65 (165)
30 1ayz_A UBC2, ubiquitin-conjuga 28.3 52 0.0018 20.6 3.0 19 17-35 32-50 (169)
31 2c2v_B Ubiquitin-conjugating e 28.0 28 0.00095 21.4 1.6 19 17-35 33-51 (154)
32 3h8k_A Ubiquitin-conjugating e 28.0 28 0.00095 21.5 1.6 18 18-35 33-50 (164)
33 2ayv_A Ubiquitin-conjugating e 27.3 29 0.00098 21.8 1.6 18 18-35 50-67 (166)
34 1yf9_A Ubiquitin carrier prote 26.9 29 0.001 21.9 1.6 19 17-35 36-54 (171)
35 2ucz_A UBC7, ubiquitin conjuga 26.4 38 0.0013 20.9 2.1 19 17-35 33-51 (165)
36 1zdn_A Ubiquitin-conjugating e 26.3 31 0.0011 21.3 1.6 18 18-35 42-59 (158)
37 3k9o_A Ubiquitin-conjugating e 26.2 35 0.0012 21.8 1.9 19 17-35 36-54 (201)
38 2hlw_A Ubiquitin-conjugating e 24.5 34 0.0012 21.6 1.6 18 18-35 68-85 (170)
39 2y9m_A Ubiquitin-conjugating e 23.1 38 0.0013 21.2 1.6 18 18-35 47-64 (172)
40 4h0c_A Phospholipase/carboxyle 21.4 43 0.0015 20.6 1.6 10 22-31 154-163 (210)
41 4ddg_A Ubiquitin-conjugating e 21.1 74 0.0025 22.5 2.9 20 17-36 31-50 (399)
42 2awf_A Ubiquitin-conjugating e 20.8 45 0.0016 20.9 1.6 18 18-35 47-64 (172)
43 3bzh_A Ubiquitin-conjugating e 20.7 45 0.0015 21.5 1.6 18 18-35 77-94 (194)
44 2z5d_A Ubiquitin-conjugating e 20.5 46 0.0016 21.3 1.6 18 18-35 50-67 (179)
45 4ds2_A Ubiquitin-conjugating e 20.5 31 0.0011 21.5 0.8 17 18-34 49-65 (167)
46 3e46_A Ubiquitin-conjugating e 20.3 53 0.0018 22.2 1.9 20 17-36 88-107 (253)
No 1
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=96.33 E-value=0.0057 Score=43.91 Aligned_cols=30 Identities=30% Similarity=0.429 Sum_probs=25.0
Q ss_pred eeEEEeCCCCCceeEEEEEEEEEeecCCCC
Q psy363 3 ALQISFNSQEPNHGFIKEWTLMIHGTRDPP 32 (59)
Q Consensus 3 ~L~v~~~~~~~~~G~l~eWtL~LhGT~~~P 32 (59)
+|+|...+.....|.|..|+|.|+||++.|
T Consensus 441 ~l~V~d~~~~~~~G~l~~w~L~~~G~~~~~ 470 (471)
T 1p8j_A 441 VLEIENTSEANNYGTLTKFTLVLYGTAPEG 470 (471)
T ss_dssp EEEEEECSSSCCCEEEEEEEEEEEEECCCC
T ss_pred EEEEEECCCCCCcEEEEEEEEEEEEecCCC
Confidence 577776655557899999999999999877
No 2
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=94.96 E-value=0.026 Score=40.97 Aligned_cols=29 Identities=10% Similarity=0.243 Sum_probs=23.6
Q ss_pred eeEEEeCCCCCceeEEEEEEEEEeecCCCC
Q psy363 3 ALQISFNSQEPNHGFIKEWTLMIHGTRDPP 32 (59)
Q Consensus 3 ~L~v~~~~~~~~~G~l~eWtL~LhGT~~~P 32 (59)
+|+|.... ....|.|+.|+|.||||...|
T Consensus 456 tL~V~d~~-~~~~G~l~~w~L~l~G~~~~~ 484 (503)
T 2id4_A 456 KIKVKTTE-NGHRIDFHSWRLKLFGESIDS 484 (503)
T ss_dssp EEEEEESS-TTCCEEEEEEEEEEEEEESCG
T ss_pred EEEEEeCC-CCCceEEEEEEEEEEeccCCc
Confidence 57777544 567899999999999998766
No 3
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=94.59 E-value=0.049 Score=39.68 Aligned_cols=19 Identities=21% Similarity=0.504 Sum_probs=15.0
Q ss_pred CCceeEEEEEEEEEeecCC
Q psy363 12 EPNHGFIKEWTLMIHGTRD 30 (59)
Q Consensus 12 ~~~~G~l~eWtL~LhGT~~ 30 (59)
....|.|+.|+|.||||..
T Consensus 579 ~~~~g~l~~w~l~~~G~~~ 597 (600)
T 3hjr_A 579 NRQPGKLISWSLRVLGHDA 597 (600)
T ss_dssp CCSCEEEEEEEEEEEEC--
T ss_pred cCCCcEEeEEEEEEEEeeC
Confidence 3456999999999999975
No 4
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=92.28 E-value=0.19 Score=36.97 Aligned_cols=18 Identities=22% Similarity=0.516 Sum_probs=14.5
Q ss_pred CceeEEEEEEEEEeecCC
Q psy363 13 PNHGFIKEWTLMIHGTRD 30 (59)
Q Consensus 13 ~~~G~l~eWtL~LhGT~~ 30 (59)
...|.|++|+|.|+||+-
T Consensus 580 ~~~g~l~~w~l~~~G~~~ 597 (600)
T 2oxa_A 580 RQPGKLISWSLRVLGHDA 597 (600)
T ss_dssp CSCEEEEEEEEEEEEC--
T ss_pred CCCceEeeEEEEEEeccc
Confidence 466999999999999973
No 5
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=45.58 E-value=19 Score=21.97 Aligned_cols=19 Identities=21% Similarity=0.646 Sum_probs=16.8
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 29 ~l~~w~~~i~Gp~~tpyeg 47 (149)
T 2r0j_A 29 NYRHFNILINGPDGTPYEG 47 (149)
T ss_dssp EEEEEEEEEECCTTSTTTT
T ss_pred cccEEEEEEECCCCCCcCC
Confidence 5889999999999999965
No 6
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=44.71 E-value=16 Score=22.32 Aligned_cols=21 Identities=19% Similarity=0.453 Sum_probs=17.8
Q ss_pred eEEEEEEEEEeecCCCCCCCC
Q psy363 16 GFIKEWTLMIHGTRDPPYSSL 36 (59)
Q Consensus 16 G~l~eWtL~LhGT~~~PY~~~ 36 (59)
.-+.+|..++.|-.+.||.+-
T Consensus 51 ~nl~~W~~~I~GP~~TpYegG 71 (136)
T 2a7l_A 51 NSITQWIVDMEGAPGTLYEGE 71 (136)
T ss_dssp CSCEEEEEEEECCTTSTTTTC
T ss_pred cccceeEEEEECCCCCccccE
Confidence 458899999999999999653
No 7
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=43.68 E-value=22 Score=21.72 Aligned_cols=19 Identities=26% Similarity=0.621 Sum_probs=16.8
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 32 ~l~~w~~~i~Gp~~tpyeg 50 (150)
T 1z2u_A 32 DLFHWQATIMGPPESPYQG 50 (150)
T ss_dssp EEEEEEEEEECCTTSTTTT
T ss_pred cceEEEEEEECCCCCCcCC
Confidence 4889999999999999965
No 8
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=43.05 E-value=22 Score=21.92 Aligned_cols=20 Identities=25% Similarity=0.667 Sum_probs=17.2
Q ss_pred eEEEEEEEEEeecCCCCCCC
Q psy363 16 GFIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 16 G~l~eWtL~LhGT~~~PY~~ 35 (59)
.-+.+|..++.|-.+.||.+
T Consensus 26 ~~l~~w~~~i~Gp~~tpyeg 45 (152)
T 2onu_A 26 GSTQDFDVMFHGPNGTAYEG 45 (152)
T ss_dssp TEEEEEEEEEECCTTSTTTT
T ss_pred CccceEEEEEECCCCCcccc
Confidence 35889999999999999965
No 9
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=40.95 E-value=25 Score=21.59 Aligned_cols=19 Identities=21% Similarity=0.587 Sum_probs=16.7
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 33 ~l~~w~~~I~Gp~~tpyeg 51 (155)
T 1jat_A 33 NLRYFQVTIEGPEQSPYED 51 (155)
T ss_dssp EEEEEEEEEECCTTSTTTT
T ss_pred chhEEEEEEECCCCCCccC
Confidence 5889999999999989864
No 10
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=36.69 E-value=32 Score=21.19 Aligned_cols=20 Identities=15% Similarity=0.365 Sum_probs=17.3
Q ss_pred eEEEEEEEEEeecCCCCCCC
Q psy363 16 GFIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 16 G~l~eWtL~LhGT~~~PY~~ 35 (59)
.-+.+|..++.|-.+.||.+
T Consensus 36 ~nl~~w~~~I~Gp~~tpyeg 55 (157)
T 2gjd_A 36 MDLQKWEAGIPGKEGTNWAG 55 (157)
T ss_dssp EEEEEEEEEEECCTTSTTTT
T ss_pred CcccEEEEEEECCCCCCcCC
Confidence 46889999999999989855
No 11
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=36.62 E-value=31 Score=21.54 Aligned_cols=19 Identities=16% Similarity=0.436 Sum_probs=16.8
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-|.+|..+|.|-.+.||.+
T Consensus 43 nl~~W~~~I~Gp~~Tpyeg 61 (163)
T 3rcz_B 43 DLMNWKVGIPGKPKTSWEG 61 (163)
T ss_dssp EEEEEEEEEECCTTSTTTT
T ss_pred CccEEEEEEECCCCCCcCC
Confidence 6889999999999989865
No 12
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=36.39 E-value=22 Score=21.49 Aligned_cols=18 Identities=17% Similarity=0.375 Sum_probs=16.0
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 39 l~~w~~~i~GP~~tpyeg 56 (138)
T 1jat_B 39 MTKWNGTILGPPHSNHEN 56 (138)
T ss_dssp CCEEEEEEECCSSSTTTT
T ss_pred ceEEEEEEECCCCCCccc
Confidence 678999999999999965
No 13
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=35.94 E-value=20 Score=22.14 Aligned_cols=18 Identities=33% Similarity=0.505 Sum_probs=16.0
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..+|.|-.+.||.+
T Consensus 40 l~~w~~~i~Gp~~tpyeg 57 (159)
T 2bep_A 40 FTELRGEIAGPPDTPYEG 57 (159)
T ss_dssp SSEEEEEEECCTTSTTTT
T ss_pred hheEEEEEECCCCCCccC
Confidence 778999999999999865
No 14
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=35.36 E-value=18 Score=21.52 Aligned_cols=18 Identities=22% Similarity=0.565 Sum_probs=15.9
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 35 l~~w~~~i~GP~~tpYeg 52 (125)
T 2fo3_A 35 IRIWIVKYVGLENTIYAN 52 (125)
T ss_dssp TTEEEEEEECCTTSTTTT
T ss_pred hhhhheEEeCCCCCCcCC
Confidence 678999999999999965
No 15
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=34.91 E-value=33 Score=22.17 Aligned_cols=19 Identities=32% Similarity=0.625 Sum_probs=16.7
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..+|.|-.+.||.+
T Consensus 73 nl~~W~~~I~GP~~TpYeg 91 (193)
T 2f4z_A 73 DIHRWRGFIAGPLGTPYEG 91 (193)
T ss_dssp EEEEEEEEEECCTTSTTTT
T ss_pred CcceEEEEEeCCCCCCcCC
Confidence 4889999999999999965
No 16
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=34.07 E-value=37 Score=20.64 Aligned_cols=20 Identities=30% Similarity=0.665 Sum_probs=16.9
Q ss_pred eEEEEEEEEEeecCCCCCCC
Q psy363 16 GFIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 16 G~l~eWtL~LhGT~~~PY~~ 35 (59)
.-+.+|..++.|-.+.||.+
T Consensus 31 ~~l~~w~~~i~Gp~~tpyeg 50 (152)
T 2aak_A 31 NNIMLWNAVIFGPDDTPWDG 50 (152)
T ss_dssp TEEEEEEEEEECCTTSTTTT
T ss_pred CCccEEEEEEeCCCCCCccC
Confidence 35889999999999989865
No 17
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=33.74 E-value=36 Score=21.76 Aligned_cols=19 Identities=32% Similarity=0.733 Sum_probs=16.8
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..+|.|-.+.||.+
T Consensus 42 nl~~W~~~I~GP~~TpYeg 60 (187)
T 2f4w_A 42 NILEWHYVVRGPEMTPYEG 60 (187)
T ss_dssp EEEEEEEEEECCTTSTTTT
T ss_pred ccceeEEEEeCCCCCCCCC
Confidence 5789999999999999965
No 18
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=33.47 E-value=38 Score=20.89 Aligned_cols=20 Identities=20% Similarity=0.541 Sum_probs=17.4
Q ss_pred eEEEEEEEEEeecCCCCCCC
Q psy363 16 GFIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 16 G~l~eWtL~LhGT~~~PY~~ 35 (59)
.-+.+|..++.|-.+.||.+
T Consensus 39 ~nl~~w~~~i~Gp~~tpyeg 58 (161)
T 2grr_A 39 MNLMNWECAIPGKKGTPWEG 58 (161)
T ss_dssp EEEEEEEEEEECCTTSTTTT
T ss_pred CCccEEEEEEECCCCCCccC
Confidence 46889999999999989865
No 19
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=32.71 E-value=21 Score=21.63 Aligned_cols=19 Identities=21% Similarity=0.494 Sum_probs=16.3
Q ss_pred EEEEEEEEeecCCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSSL 36 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~~ 36 (59)
+.+|..++.|-.+.||.+-
T Consensus 49 l~~W~~~I~GP~~tpYegg 67 (136)
T 2h2y_A 49 IRIWIVQYVGLENTIYANE 67 (136)
T ss_dssp TTEEEEEEECCTTSTTTTC
T ss_pred ccccEEEEECCCCCceeCC
Confidence 6789999999999999653
No 20
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=32.61 E-value=23 Score=21.52 Aligned_cols=19 Identities=21% Similarity=0.282 Sum_probs=16.3
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 30 ~l~~w~~~I~Gp~~tpyeg 48 (149)
T 1fxt_A 30 DIHHLKGTFLGPPGTPYEG 48 (149)
T ss_dssp CSSEEEEEEECCSSSTTCS
T ss_pred CceEEEEEEECCCCCCcCC
Confidence 3778999999999989865
No 21
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=31.97 E-value=29 Score=21.68 Aligned_cols=18 Identities=17% Similarity=0.586 Sum_probs=16.0
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 54 l~~W~~~I~GP~~TpYeg 71 (156)
T 2q0v_A 54 LSNWSCTIFGQPGTVFEN 71 (156)
T ss_dssp CCEEEEEEECCTTSTTTT
T ss_pred ceeeEEEEECCCCCCcCC
Confidence 678999999999999965
No 22
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=31.72 E-value=41 Score=21.44 Aligned_cols=19 Identities=26% Similarity=0.532 Sum_probs=16.8
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 58 nl~~W~~~I~GP~~TpYeg 76 (179)
T 1i7k_A 58 NLFKWVGTIHGAAGTVYED 76 (179)
T ss_dssp EEEEEEEEEEBCTTSTTBT
T ss_pred cccccEEEEECCCCCCcCC
Confidence 5888999999999999965
No 23
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=31.70 E-value=21 Score=21.80 Aligned_cols=20 Identities=40% Similarity=0.639 Sum_probs=16.5
Q ss_pred EEEEEEEEEeecCCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSSL 36 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~~ 36 (59)
-+.+|..+++|-.+.||.+-
T Consensus 32 nl~~w~~~i~Gp~~tpyegg 51 (151)
T 4gpr_A 32 DIFHWTATITGPDDSPYQGG 51 (151)
T ss_dssp CTTEEEEEEECCSSSTTTTC
T ss_pred CceEEEEEEeCCCCCCcCCC
Confidence 36789999999999898653
No 24
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=30.77 E-value=28 Score=21.92 Aligned_cols=18 Identities=22% Similarity=0.654 Sum_probs=16.0
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 52 l~~W~~~I~GP~~TpYeg 69 (169)
T 1yrv_A 52 MMEWEVEIEGLQNSVWQG 69 (169)
T ss_dssp SCEEEEEEECCTTSTTTT
T ss_pred cccceeEEECCCCCCccc
Confidence 678999999999999965
No 25
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=30.77 E-value=24 Score=20.51 Aligned_cols=10 Identities=20% Similarity=0.318 Sum_probs=8.8
Q ss_pred EEEEeecCCC
Q psy363 22 TLMIHGTRDP 31 (59)
Q Consensus 22 tL~LhGT~~~ 31 (59)
+|+|||++|.
T Consensus 140 ~LiihG~~D~ 149 (202)
T 4fle_A 140 LWLLQQTGDE 149 (202)
T ss_dssp EEEEEETTCS
T ss_pred EEEEEeCCCC
Confidence 6999999993
No 26
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=29.35 E-value=25 Score=22.32 Aligned_cols=19 Identities=21% Similarity=0.520 Sum_probs=16.1
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-|.+|..+|+|-.+.||.+
T Consensus 36 nl~~W~~~I~Gp~~tpyeg 54 (183)
T 3rz3_A 36 DLYNWEVAIFGPPNTYYEG 54 (183)
T ss_dssp CTTEEEEEEECCTTSTTTT
T ss_pred chhheeeeeeCCCCCCCCC
Confidence 3678999999999989854
No 27
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=29.20 E-value=26 Score=21.54 Aligned_cols=19 Identities=26% Similarity=0.628 Sum_probs=16.3
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 37 ~l~~w~~~i~Gp~~tpyeg 55 (156)
T 2e2c_A 37 NLFKWVATLDGPKDTVYES 55 (156)
T ss_dssp CTTEEEEEEECCTTSTTTT
T ss_pred CccEEEEEEECCCCCCcCC
Confidence 4678999999999999965
No 28
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=28.94 E-value=34 Score=21.53 Aligned_cols=18 Identities=33% Similarity=0.623 Sum_probs=15.9
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
|.+|..++.|-.+.||.+
T Consensus 58 l~~W~~~I~GP~~TpYeg 75 (160)
T 2a4d_A 58 LTRWTGMIIGPPRTIYEN 75 (160)
T ss_dssp CCEEEEEEECCTTSTTTT
T ss_pred ceeeEEEEECCCCCCccC
Confidence 678999999999999965
No 29
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=28.45 E-value=27 Score=21.87 Aligned_cols=19 Identities=32% Similarity=0.672 Sum_probs=16.3
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 47 nl~~W~~~I~GP~~TpYeg 65 (165)
T 2c4o_A 47 DMFHWQATIMGPNDSPYQG 65 (165)
T ss_dssp CTTEEEEEEECCTTSTTTT
T ss_pred CcceeEEEEECCCCCCccC
Confidence 3678999999999999965
No 30
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=28.33 E-value=52 Score=20.63 Aligned_cols=19 Identities=37% Similarity=0.760 Sum_probs=16.5
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 32 nl~~W~~~I~GP~~tpYeg 50 (169)
T 1ayz_A 32 NVMVWNAMIIGPADTPYED 50 (169)
T ss_dssp EEEEEEEEEECCTTSTTTT
T ss_pred ccccceEEEECCCCCCcCC
Confidence 4888999999999989865
No 31
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=27.96 E-value=28 Score=21.39 Aligned_cols=19 Identities=21% Similarity=0.573 Sum_probs=16.2
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..+++|-.+.||.+
T Consensus 33 ~l~~w~~~i~GP~~tpyeg 51 (154)
T 2c2v_B 33 NARYFHVVIAGPQDSPFEG 51 (154)
T ss_dssp CTTEEEEEEECCTTSTTTT
T ss_pred chheEEEEEECCCCCCcCC
Confidence 4678999999999999865
No 32
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=27.96 E-value=28 Score=21.46 Aligned_cols=18 Identities=28% Similarity=0.575 Sum_probs=15.6
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
|.+|..+++|-.+.||.+
T Consensus 33 l~~w~~~I~Gp~~tpyeg 50 (164)
T 3h8k_A 33 FFEWEALIMGPEDTCFEF 50 (164)
T ss_dssp TTEEEEEEECCTTSTTTT
T ss_pred ccEEEEEEeCCCCCCCCC
Confidence 668999999999989864
No 33
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=27.35 E-value=29 Score=21.79 Aligned_cols=18 Identities=39% Similarity=0.831 Sum_probs=15.9
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 50 l~~W~~~I~GP~~TpYeg 67 (166)
T 2ayv_A 50 MFHWQATIMGPEDSPYSG 67 (166)
T ss_dssp TTEEEEEEECCTTSTTTT
T ss_pred cceeeEEEECCCCCCcCC
Confidence 678999999999999965
No 34
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=26.90 E-value=29 Score=21.89 Aligned_cols=19 Identities=21% Similarity=0.510 Sum_probs=16.1
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 36 ~l~~w~~~I~GP~~tpyeg 54 (171)
T 1yf9_A 36 TVAEFWVEFKGPEGTPYED 54 (171)
T ss_dssp STTEEEEEEECCTTSTTTT
T ss_pred CceEEEEEEECCCCCCccC
Confidence 3678999999999999965
No 35
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=26.44 E-value=38 Score=20.87 Aligned_cols=19 Identities=37% Similarity=0.758 Sum_probs=16.2
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..++.|-.+.||.+
T Consensus 33 ~l~~w~~~i~GP~~tpYeg 51 (165)
T 2ucz_A 33 NIFIWDCLIQGPPDTPYAD 51 (165)
T ss_dssp CCSEEEEEEECCTTSTTTT
T ss_pred CccEEEEEEECCCCCCccC
Confidence 3668999999999999965
No 36
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=26.31 E-value=31 Score=21.26 Aligned_cols=18 Identities=22% Similarity=0.643 Sum_probs=15.7
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 42 l~~w~~~i~Gp~~tpyeg 59 (158)
T 1zdn_A 42 LTDLQVTIEGPEGTPYAG 59 (158)
T ss_dssp TTEEEEEEECCTTSTTTT
T ss_pred hhheeEEEECCCCCCccC
Confidence 678999999999989865
No 37
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=26.19 E-value=35 Score=21.81 Aligned_cols=19 Identities=32% Similarity=0.424 Sum_probs=16.3
Q ss_pred EEEEEEEEEeecCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~ 35 (59)
-+.+|..+++|-.+.||.+
T Consensus 36 nl~~w~~~i~Gp~~tpyeg 54 (201)
T 3k9o_A 36 NFTELRGEIAGPPDTPYEG 54 (201)
T ss_dssp TSSEEEEEEECCTTSTTTT
T ss_pred CccEEEEEEECCCCCCCCC
Confidence 3678999999999999965
No 38
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=24.54 E-value=34 Score=21.65 Aligned_cols=18 Identities=33% Similarity=0.623 Sum_probs=15.9
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
|.+|..++.|-.+.||.+
T Consensus 68 l~~W~~~I~GP~~TpYeg 85 (170)
T 2hlw_A 68 LTRWTGMIIGPPRTIYEN 85 (170)
T ss_dssp CCBEEEEECCCSSSTTSS
T ss_pred ceeeEEEEeCCCCCCcCC
Confidence 678999999999999965
No 39
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=23.15 E-value=38 Score=21.22 Aligned_cols=18 Identities=33% Similarity=0.946 Sum_probs=15.7
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 47 l~~w~~~I~Gp~~tpyeg 64 (172)
T 2y9m_A 47 LSKWEAIISGPSDTPYEN 64 (172)
T ss_dssp TTEEEEEEECCTTSTTTT
T ss_pred hhEEEEEEECCCCCcccC
Confidence 567999999999999965
No 40
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=21.40 E-value=43 Score=20.56 Aligned_cols=10 Identities=30% Similarity=0.697 Sum_probs=8.8
Q ss_pred EEEEeecCCC
Q psy363 22 TLMIHGTRDP 31 (59)
Q Consensus 22 tL~LhGT~~~ 31 (59)
.|++|||+|+
T Consensus 154 vl~~hG~~D~ 163 (210)
T 4h0c_A 154 VFISTGNPDP 163 (210)
T ss_dssp EEEEEEESCT
T ss_pred eEEEecCCCC
Confidence 5889999996
No 41
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=21.12 E-value=74 Score=22.48 Aligned_cols=20 Identities=30% Similarity=0.565 Sum_probs=17.0
Q ss_pred EEEEEEEEEeecCCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSSL 36 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~~ 36 (59)
-+.+|..+++|-.+.||.+-
T Consensus 31 nl~~w~~~i~Gp~~tpyegg 50 (399)
T 4ddg_A 31 DMFHWQATIMGPNDSPYQGG 50 (399)
T ss_dssp EEEEEEEEEECCTTSSSTTC
T ss_pred cceEEEEEEECCCCCCCCCC
Confidence 48889999999999998653
No 42
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=20.83 E-value=45 Score=20.91 Aligned_cols=18 Identities=28% Similarity=0.709 Sum_probs=15.4
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 47 l~~W~~~I~GP~~TpYeg 64 (172)
T 2awf_A 47 LYRWEVLIIGPPDTLYEG 64 (172)
T ss_dssp TTEEEEEEECCTTSTTTT
T ss_pred ccccEEEEeCCCCCCcCC
Confidence 557999999999999965
No 43
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=20.72 E-value=45 Score=21.51 Aligned_cols=18 Identities=33% Similarity=0.590 Sum_probs=15.8
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..+|.|-.+.||.+
T Consensus 77 l~~W~~~I~GP~~TpYeg 94 (194)
T 3bzh_A 77 IYEWRSTILGPPGSVYEG 94 (194)
T ss_dssp TTEEEEEEECCTTSTTTT
T ss_pred cccceEEEeCCCCCCccC
Confidence 678999999999999965
No 44
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=20.49 E-value=46 Score=21.28 Aligned_cols=18 Identities=22% Similarity=0.637 Sum_probs=15.7
Q ss_pred EEEEEEEEeecCCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYSS 35 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~~ 35 (59)
+.+|..++.|-.+.||.+
T Consensus 50 l~~W~~~I~GP~~tpYeg 67 (179)
T 2z5d_A 50 LNEFVVKFYGPQGTPYEG 67 (179)
T ss_dssp TTEEEEEEECCTTSTTTT
T ss_pred CceeEEEEECCCCCCccC
Confidence 578999999999999965
No 45
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=20.45 E-value=31 Score=21.46 Aligned_cols=17 Identities=29% Similarity=0.671 Sum_probs=15.2
Q ss_pred EEEEEEEEeecCCCCCC
Q psy363 18 IKEWTLMIHGTRDPPYS 34 (59)
Q Consensus 18 l~eWtL~LhGT~~~PY~ 34 (59)
+.+|..+++|-.+.||.
T Consensus 49 l~~w~~~i~Gp~~tpye 65 (167)
T 4ds2_A 49 IYNWILKVKAPADSVYG 65 (167)
T ss_dssp TTEEEEEEECCTTSGGG
T ss_pred ccEEEEEEECCCCCCcc
Confidence 56799999999999998
No 46
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=20.27 E-value=53 Score=22.23 Aligned_cols=20 Identities=30% Similarity=0.330 Sum_probs=16.7
Q ss_pred EEEEEEEEEeecCCCCCCCC
Q psy363 17 FIKEWTLMIHGTRDPPYSSL 36 (59)
Q Consensus 17 ~l~eWtL~LhGT~~~PY~~~ 36 (59)
-+.+|..+|+|-.+.||.+-
T Consensus 88 nl~~W~~~I~GP~~TpYegG 107 (253)
T 3e46_A 88 NFTELRGEIAGPPDTPYEGG 107 (253)
T ss_dssp TSSEEEEEEECCTTSTTTTC
T ss_pred cccEEEEEEECCCCCCcCCC
Confidence 36789999999999999653
Done!