RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3630
(172 letters)
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation,
mutant T356D, lipid binding protein; 2.65A {Homo
sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Length = 672
Score = 122 bits (306), Expect = 7e-33
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 23/177 (12%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
M ++C+R Y A+RL AM G+GT D TLIRI+V+RSE+D+ DI++ + YE +L
Sbjct: 241 MLAVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSL 300
Query: 61 EERIKDDTSGDYKRLLVAL----------------------SETSGSLEDGYLSIVRCVR 98
IK+DTSG+YK+ L+ L E S VR
Sbjct: 301 YSMIKNDTSGEYKKTLLKLSGGDDDAAGQFFPEAAQVAYQMWELSAVARVELKGDVRPAN 360
Query: 99 DKSAYL-AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
D + A+ L AM G+GT++ T+I II RS + I+Q + + L +K
Sbjct: 361 DFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLK 417
Score = 108 bits (270), Expect = 5e-28
Identities = 43/140 (30%), Positives = 78/140 (55%), Gaps = 15/140 (10%)
Query: 16 AQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKR 74
+ + +G + + + I+ TRS L + Q+++KM +E IK + SGD +
Sbjct: 528 ILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSGDVRD 587
Query: 75 LLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDL 134
VA IV+ V++K + A +L +M G GT+D+TL RI+V+RSEIDL
Sbjct: 588 AFVA--------------IVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIMVSRSEIDL 633
Query: 135 GDIKQDYLKMYETTLEERIK 154
+I++++++ Y+ +L + I+
Sbjct: 634 LNIRREFIEKYDKSLHQAIE 653
Score = 106 bits (265), Expect = 3e-27
Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 15/140 (10%)
Query: 16 AQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKR 74
Q L A GT++ I I+ RS+ L + +YLK +E I+ + SGD+++
Sbjct: 180 VQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEK 239
Query: 75 LLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDL 134
L++A +V+C+R Y A+RL AM G+GT D TLIRI+V+RSE+D+
Sbjct: 240 LMLA--------------VVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDM 285
Query: 135 GDIKQDYLKMYETTLEERIK 154
DI++ + YE +L IK
Sbjct: 286 LDIREIFRTKYEKSLYSMIK 305
Score = 102 bits (256), Expect = 4e-26
Identities = 40/150 (26%), Positives = 76/150 (50%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
L + + Y A++L+ AM G GT+++ LI I+ TR+ ++ I + Y + Y +LE+ +
Sbjct: 429 LGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDAL 488
Query: 65 KDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIR 124
DTSG ++R+L++L+ L R +A + + + + + +
Sbjct: 489 SSDTSGHFRRILISLATGHREEGGENLDQAREDAQVAAEILEIADTPSGDKTSLETRFMT 548
Query: 125 IIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
I+ TRS L + Q+++KM +E IK
Sbjct: 549 ILCTRSYPHLRRVFQEFIKMTNYDVEHTIK 578
Score = 102 bits (254), Expect = 7e-26
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
A+ L AM G G++ ++ II +RS ++ Q Y +Y L +K + +G ++RL
Sbjct: 25 AEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERL 84
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
+V L +R + A+ +++A++G+GT+++ LI I+ +R+ +
Sbjct: 85 IVGL-----------------MRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMH 127
Query: 136 DIKQDYLKMYETTLEERIK 154
+ Y YE LE I
Sbjct: 128 QLVAAYKDAYERDLEADII 146
Score = 99.3 bits (247), Expect = 6e-25
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
A+ L AM G+GT++ T+I II RS + I+Q + + L +K + SGD RL
Sbjct: 368 AKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARL 427
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
++ L + + Y A++L+ AM G GT+++ LI I+ TR+ ++
Sbjct: 428 ILGL-----------------MMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIR 470
Query: 136 DIKQDYLKMYETTLEERIK 154
I + Y + Y +LE+ +
Sbjct: 471 AINEAYKEDYHKSLEDALS 489
Score = 99.3 bits (247), Expect = 7e-25
Identities = 32/79 (40%), Positives = 57/79 (72%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
++ V++K + A +L +M G GT+D+TL RI+V+RSEIDL +I++++++ Y+ +L
Sbjct: 589 FVAIVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIMVSRSEIDLLNIRREFIEKYDKSL 648
Query: 61 EERIKDDTSGDYKRLLVAL 79
+ I+ DTSGD+ + L+AL
Sbjct: 649 HQAIEGDTSGDFLKALLAL 667
Score = 98.6 bits (245), Expect = 1e-24
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
R + +R + A+ +++A++G+GT+++ LI I+ +R+ + + Y YE L
Sbjct: 82 ERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDL 141
Query: 61 EERIKDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAG-MGTND 119
E I DTSG ++++LV L + + ED +S +D Q L A GT++
Sbjct: 142 EADIIGDTSGHFQKMLVVLLQGTRE-EDDVVSEDLVQQD-----VQDLYEAGELKWGTDE 195
Query: 120 RTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
I I+ RS+ L + +YLK +E I+
Sbjct: 196 AQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIR 230
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A
{Giardia intestinalis} PDB: 2iic_A
Length = 310
Score = 117 bits (294), Expect = 1e-32
Identities = 17/155 (10%), Positives = 48/155 (30%), Gaps = 14/155 (9%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETT 59
+ R R A A+ L++ + + ++R+I+T + + +I + + +
Sbjct: 145 AIRENRTPRGSVASDAEVLKHNLIDADEPDHEAVVRLIITSTADEYKEINHRFEVLTGKS 204
Query: 60 LEERIKDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTND 119
++E I+ + G + +A +A+ +
Sbjct: 205 VQEAIETRYADKE-------------NARGLCIAHYYNLAPARAVAYAFHSAVETQNDDM 251
Query: 120 RTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
+T DL + + ++ +
Sbjct: 252 AYEQAARITGLFHDLHKFAWVHYACWGVMRDDILS 286
Score = 87.2 bits (216), Expect = 2e-21
Identities = 6/74 (8%), Positives = 20/74 (27%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
+ +A +A+ + +T DL + + ++ +
Sbjct: 226 HYYNLAPARAVAYAFHSAVETQNDDMAYEQAARITGLFHDLHKFAWVHYACWGVMRDDIL 285
Query: 65 KDDTSGDYKRLLVA 78
S + ++
Sbjct: 286 SRFQSKEANKVNFR 299
Score = 86.8 bits (215), Expect = 4e-21
Identities = 19/145 (13%), Positives = 52/145 (35%), Gaps = 15/145 (10%)
Query: 13 AYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDD--TSG 70
+ ++ AM + R + +++ + + + Q Y + L + D +
Sbjct: 78 SARVNVIKKAMKN-VNDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTS 136
Query: 71 DYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAG-MGTNDRTLIRIIVTR 129
L + R R A A+ L++ + + ++R+I+T
Sbjct: 137 AASYLCHLA-----------IRENRTPRGSVASDAEVLKHNLIDADEPDHEAVVRLIITS 185
Query: 130 SEIDLGDIKQDYLKMYETTLEERIK 154
+ + +I + + +++E I+
Sbjct: 186 TADEYKEINHRFEVLTGKSVQEAIE 210
Score = 75.3 bits (185), Expect = 5e-17
Identities = 12/141 (8%), Positives = 40/141 (28%), Gaps = 21/141 (14%)
Query: 15 LAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDD-TSGDYK 73
++ + N+ L+ S + +++ + +K +G Y+
Sbjct: 9 AIPEVKAILEA--KNEEELVTFTSRWSAEERKELRTQFQDTTGLEFIAFLKKCIKNGPYE 66
Query: 74 RLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEID 133
++ + ++ AM + R + +++ + +
Sbjct: 67 DVMALG-----------------WDCNISARVNVIKKAMKN-VNDFRAIHDVVLIATPDE 108
Query: 134 LGDIKQDYLKMYETTLEERIK 154
+ Q Y + L +
Sbjct: 109 RLKLAQAYKEKTGNDLLQDFV 129
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein;
2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A
1ycn_A 2q4c_A 1dk5_A
Length = 321
Score = 114 bits (287), Expect = 2e-31
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
A+ L ++ +D +IR++ TRS+ + Y Y + + +K D ++ L
Sbjct: 177 AKLLHEKISNKAYSDDDVIRVLATRSKAQINATLNHYKNEYGNDINKDLKADPKDEFLAL 236
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
L + V+C+ Y + L A+ GT++ L R++ TR+E+DL
Sbjct: 237 LRS--------------TVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLK 282
Query: 136 DIKQDYLKMYETTLEERIK 154
I +Y + L I
Sbjct: 283 VIADEYQRRNSVPLTRAIV 301
Score = 102 bits (255), Expect = 6e-27
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
+R ++C+ Y + L A+ GT++ L R++ TR+E+DL I +Y + L
Sbjct: 237 LRSTVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPL 296
Query: 61 EERIKDDTSGDYKRLLVAL 79
I DT GDY++LL+ L
Sbjct: 297 TRAIVKDTHGDYEKLLLVL 315
Score = 95.8 bits (238), Expect = 2e-24
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
++L A +G GTN+ +I I+ R+ I++ Y + Y L + + + S D++RL
Sbjct: 22 CEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALDKELSNDFERL 81
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
++ D + A A ++++ L+ I TRS L
Sbjct: 82 VLLW-----------------ALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLL 124
Query: 136 DIKQDYLKMYETTLEERIK 154
+Q Y Y+ +LEE +
Sbjct: 125 HARQAYHARYKKSLEEDVA 143
Score = 93.1 bits (231), Expect = 2e-23
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
L D + A A ++++ L+ I TRS L +Q Y Y+ +LEE +
Sbjct: 83 LLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARYKKSLEEDV 142
Query: 65 KDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIR 124
T+GD+ +LL+ L + E +++ + A+ L ++ +D +IR
Sbjct: 143 AHHTTGDFHKLLLPLVSSYRY-EGEEVNMTLAKTE-----AKLLHEKISNKAYSDDDVIR 196
Query: 125 IIVTRSEIDLGDIKQDYLKMYETTLEERI 153
++ TRS+ + Y Y + + +
Sbjct: 197 VLATRSKAQINATLNHYKNEYGNDINKDL 225
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form,
FULL-length protein comprising protein core and
N-terminal domain, metal; 1.80A {Sus scrofa} SCOP:
a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Length = 346
Score = 109 bits (273), Expect = 3e-29
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 16 AQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKR 74
A+ L A GT+ I I+ TRS L + Q Y K + + + +
Sbjct: 203 ARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKVLD--------- 253
Query: 75 LLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDL 134
E G +E+ +V+C K + A++L AM G+GT +TLIRI+V+RSEID+
Sbjct: 254 -----LELKGDIENCLTVVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDM 308
Query: 135 GDIKQDYLKMYETTLEERIK 154
DIK Y K+Y +L + I
Sbjct: 309 NDIKACYQKLYGISLCQAIL 328
Score = 97.8 bits (243), Expect = 4e-25
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
+ ++C K + A++L AM G+GT +TLIRI+V+RSEID+ DIK Y K+Y +L
Sbjct: 264 LTVVVKCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISL 323
Query: 61 EERIKDDTSGDYKRLLVAL 79
+ I D+T GDY+++LVAL
Sbjct: 324 CQAILDETKGDYEKILVAL 342
Score = 97.0 bits (241), Expect = 1e-24
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 7/151 (4%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
L ++ + + A L AM G+GT++ TL I+ +R+ ++ +I + Y + + L + I
Sbjct: 109 LALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDI 168
Query: 65 KDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAG-MGTNDRTLI 123
DTSGDY++ L++L++ S ED ++ D A+ L A GT+ I
Sbjct: 169 TSDTSGDYQKALLSLAKGDRS-EDLAINDDLADTD-----ARALYEAGERRKGTDLNVFI 222
Query: 124 RIIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
I+ TRS L + Q Y K + + + +
Sbjct: 223 TILTTRSYPHLRRVFQKYSKYSKHDMNKVLD 253
Score = 96.6 bits (240), Expect = 1e-24
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
+ L A+ G ++ T+I I+ R+ IK YL+ L+E +K +G + +
Sbjct: 48 VEALHKAITVKGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEV 107
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
+AL ++ + + A L AM G+GT++ TL I+ +R+ ++
Sbjct: 108 ALAL-----------------LKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIR 150
Query: 136 DIKQDYLKMYETTLEERIK 154
+I + Y + + L + I
Sbjct: 151 EINRVYKEELKRDLAKDIT 169
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid
binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Length = 327
Score = 108 bits (271), Expect = 3e-29
Identities = 57/147 (38%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
Query: 9 RDKSAYLAQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDD 67
+ AQ L A GT++ I I+ TRS L + ++Y K+ ++E+ IK
Sbjct: 176 PALALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIK-- 233
Query: 68 TSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIV 127
SET GSLE+ L++V+C ++ +Y A+RL AM G GT D TLIR IV
Sbjct: 234 ------------SETHGSLEEAMLTVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIV 281
Query: 128 TRSEIDLGDIKQDYLKMYETTLEERIK 154
+RSEIDL IK + KMY TL I
Sbjct: 282 SRSEIDLNLIKCHFKKMYGKTLSSMIM 308
Score = 98.5 bits (245), Expect = 2e-25
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
A+ L AM G+GTN++ +I ++ RS I + + + L E +K + SG ++RL
Sbjct: 27 AETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERL 86
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
+VAL + Y A+ L +AM G+GT + +I I+ +R++ L
Sbjct: 87 IVAL-----------------MYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLR 129
Query: 136 DIKQDYLKMYETTLEERIK 154
+I + Y + Y ++LEE I+
Sbjct: 130 EIMKAYEEDYGSSLEEDIQ 148
Score = 98.1 bits (244), Expect = 3e-25
Identities = 41/79 (51%), Positives = 52/79 (65%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
M ++C ++ +Y A+RL AM G GT D TLIR IV+RSEIDL IK + KMY TL
Sbjct: 244 MLTVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTL 303
Query: 61 EERIKDDTSGDYKRLLVAL 79
I +DTSGDYK L++L
Sbjct: 304 SSMIMEDTSGDYKNALLSL 322
Score = 96.2 bits (239), Expect = 2e-24
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Query: 2 RKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLE 61
R + + Y A+ L +AM G+GT + +I I+ +R++ L +I + Y + Y ++LE
Sbjct: 85 RLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLE 144
Query: 62 ERIKDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAG-MGTNDR 120
E I+ DTSG +R+LV L + S ++ + AQ L A GT++
Sbjct: 145 EDIQADTSGYLERILVCLLQGSRDDVSSFVD-----PALALQDAQDLYAAGEKIRGTDEM 199
Query: 121 TLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
I I+ TRS L + ++Y K+ ++E+ IK
Sbjct: 200 KFITILCTRSATHLLRVFEEYEKIANKSIEDSIK 233
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein,
helix BUN heparin, hexasaccharide, metal binding
protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB:
2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Length = 308
Score = 107 bits (269), Expect = 6e-29
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 15/140 (10%)
Query: 16 AQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKR 74
A+ L +A GT+ I I+ RS L + Y + E I+ + GD +
Sbjct: 164 ARDLYDAGVKRKGTDVPKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIRKEVKGDLEN 223
Query: 75 LLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDL 134
+ +V+C+++K Y A RL ++M G GT D+ LIRI+V+RSE+D+
Sbjct: 224 AFLN--------------LVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDM 269
Query: 135 GDIKQDYLKMYETTLEERIK 154
I+ ++ + Y +L I+
Sbjct: 270 LKIRSEFKRKYGKSLYYYIQ 289
Score = 102 bits (255), Expect = 6e-27
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
A +E A+ G ++ T++ I+ RS DI Y + + L +K SG + +
Sbjct: 8 ALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHLETV 67
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
++ L ++ + Y A L+ +M G+GT++ +LI II +R+ +L
Sbjct: 68 ILGL-----------------LKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQ 110
Query: 136 DIKQDYLKMYETTLEERIK 154
+I + Y +MY+T LE+ I
Sbjct: 111 EINRVYKEMYKTDLEKDII 129
Score = 99 bits (249), Expect = 4e-26
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
L ++ + Y A L+ +M G+GT++ +LI II +R+ +L +I + Y +MY+T L
Sbjct: 65 ETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDL 124
Query: 61 EERIKDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAG-MGTND 119
E+ I DTSGD+++L+VAL++ + + + +D A+ L +A GT+
Sbjct: 125 EKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQD-----ARDLYDAGVKRKGTDV 179
Query: 120 RTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
I I+ RS L + Y + E I+
Sbjct: 180 PKWISIMTERSVPHLQKVFDRYKSYSPYDMLESIR 214
Score = 98.4 bits (245), Expect = 2e-25
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
++C+++K Y A RL ++M G GT D+ LIRI+V+RSE+D+ I+ ++ + Y +L
Sbjct: 225 FLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSL 284
Query: 61 EERIKDDTSGDYKRLLVAL 79
I+ DT GDY++ L+ L
Sbjct: 285 YYYIQQDTKGDYQKALLYL 303
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein
complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Length = 323
Score = 107 bits (269), Expect = 8e-29
Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 16 AQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKR 74
AQ L A GT++ I+ RS L +Y + + + + IK
Sbjct: 179 AQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIK--------- 229
Query: 75 LLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDL 134
E SG ED L+IV CVR+ A+LA+RL A+ G+GT++ TL RI+V+RSEIDL
Sbjct: 230 -----GELSGHFEDLLLAIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDL 284
Query: 135 GDIKQDYLKMYETTLEERIK 154
DI+ ++ K Y +L IK
Sbjct: 285 LDIRTEFKKHYGYSLYSAIK 304
Score = 101 bits (252), Expect = 2e-26
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
+ + CVR+ A+LA+RL A+ G+GT++ TL RI+V+RSEIDL DI+ ++ K Y +L
Sbjct: 240 LLAIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSL 299
Query: 61 EERIKDDTSGDYKRLLVAL 79
IK DTSGDY+ L+ +
Sbjct: 300 YSAIKSDTSGDYEITLLKI 318
Score = 100 bits (251), Expect = 2e-26
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
A+ ++ A+ G+GT+++ LI I+ RS I ++Y Y L++ +K D SG ++ L
Sbjct: 24 AEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHL 83
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
+VAL V + + A++L+ +M G GTN+ LI I+ TR+ +
Sbjct: 84 MVAL-----------------VTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMK 126
Query: 136 DIKQDYLKMYETTLEERIK 154
DI Q Y +Y+ +L + I
Sbjct: 127 DISQAYYTVYKKSLGDDIS 145
Score = 97.3 bits (242), Expect = 6e-25
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
+ V + + A++L+ +M G GTN+ LI I+ TR+ + DI Q Y +Y+ +L + I
Sbjct: 85 VALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDI 144
Query: 65 KDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIR 124
+TSGD+++ L+ L++ G ++ + + L + EN GT++
Sbjct: 145 SSETSGDFRKALLTLAD--GRRDESLKVDEHLAKQDAQILYKAGEN---RWGTDEDKFTE 199
Query: 125 IIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
I+ RS L +Y + + + + IK
Sbjct: 200 ILCLRSFPQLKLTFDEYRNISQKDIVDSIK 229
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal
binding protein, calcium, calcium/phospholipid-binding;
1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A
1i4a_A 1aow_A
Length = 322
Score = 106 bits (265), Expect = 2e-28
Identities = 48/140 (34%), Positives = 83/140 (59%), Gaps = 15/140 (10%)
Query: 16 AQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKR 74
AQ L A GT++ + I+ +R+ L + +Y ++ + +E+ IK +TSG ++
Sbjct: 178 AQDLYEAGEKRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIEQSIKSETSGSFED 237
Query: 75 LLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDL 134
L L+IV+C+R+K AY A+RL +M G+GT+D TLIR++V+R+EID+
Sbjct: 238 AL--------------LAIVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDM 283
Query: 135 GDIKQDYLKMYETTLEERIK 154
DI+ ++ ++Y +L IK
Sbjct: 284 LDIRANFKRLYGKSLYSFIK 303
Score = 101 bits (254), Expect = 1e-26
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
AQ L AM G+GT++ +I ++ R+ +I+ Y L E +K + S +++++
Sbjct: 23 AQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQV 82
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
++ + + Y Q L AM G GT++ LI I+ +R+ ++
Sbjct: 83 ILGM-----------------MTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIR 125
Query: 136 DIKQDYLKMYETTLEERIK 154
I Q Y + Y +LEE I
Sbjct: 126 RINQTYQQQYGRSLEEDIC 144
Score = 98.5 bits (245), Expect = 2e-25
Identities = 36/79 (45%), Positives = 60/79 (75%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
+ ++C+R+K AY A+RL +M G+GT+D TLIR++V+R+EID+ DI+ ++ ++Y +L
Sbjct: 239 LLAIVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGKSL 298
Query: 61 EERIKDDTSGDYKRLLVAL 79
IK DTSGDY+++L+ L
Sbjct: 299 YSFIKGDTSGDYRKVLLIL 317
Score = 98.1 bits (244), Expect = 3e-25
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
L + Y Q L AM G GT++ LI I+ +R+ ++ I Q Y + Y +LEE I
Sbjct: 84 LGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDI 143
Query: 65 KDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAG-MGTNDRTLI 123
DTS ++R+LV+L+ E YL +D AQ L A GT++ +
Sbjct: 144 CSDTSFMFQRVLVSLTAGGRD-EGNYLDDALVKQD-----AQDLYEAGEKRWGTDEVKFL 197
Query: 124 RIIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
I+ +R+ L + +Y ++ + +E+ IK
Sbjct: 198 SILCSRNRNHLLHVFDEYKRISQKDIEQSIK 228
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent
hexamerization switch E76, low calcium form; 1.93A
{Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Length = 315
Score = 105 bits (262), Expect = 6e-28
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 15/140 (10%)
Query: 16 AQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKR 74
A + A G +GT++ ++ TRS L I +Y K+ T+ + I+++ SGD K
Sbjct: 173 AAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKN 232
Query: 75 LLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDL 134
L+A IV+ V ++ AY A+RL +AM G+GT+D+TLIRI+V+RSEIDL
Sbjct: 233 GLLA--------------IVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDL 278
Query: 135 GDIKQDYLKMYETTLEERIK 154
+IK+ + MY +L E I
Sbjct: 279 ANIKETFQAMYGKSLYEFIA 298
Score = 99.2 bits (247), Expect = 8e-26
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
A+ L AM G+GT+++++ I+ TRS IK DY ++ LE+ +K + SG+Y+
Sbjct: 18 AETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAA 77
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
+AL +R +LA++L AM G+GT+ LI I+ T+S +
Sbjct: 78 ALAL-----------------LRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIH 120
Query: 136 DIKQDYLKMYETTLEERIK 154
IK + +Y+ LE+ I
Sbjct: 121 AIKAAFKLLYKEDLEKEII 139
Score = 98.9 bits (246), Expect = 1e-25
Identities = 40/79 (50%), Positives = 58/79 (73%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
+ ++ V ++ AY A+RL +AM G+GT+D+TLIRI+V+RSEIDL +IK+ + MY +L
Sbjct: 234 LLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSL 293
Query: 61 EERIKDDTSGDYKRLLVAL 79
E I DD SGDYK LL+ +
Sbjct: 294 YEFIADDCSGDYKDLLLQI 312
Score = 96.9 bits (241), Expect = 8e-25
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
L +R +LA++L AM G+GT+ LI I+ T+S + IK + +Y+ L
Sbjct: 75 EAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDL 134
Query: 61 EERIKDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAG-MGTND 119
E+ I +TSG+++RLLV++ + ED ++ D A + A G +GT++
Sbjct: 135 EKEIISETSGNFQRLLVSMLQGGRK-EDEPVNAAHAAED-----AAAIYQAGEGQIGTDE 188
Query: 120 RTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
++ TRS L I +Y K+ T+ + I+
Sbjct: 189 SRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIE 223
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane
binding, matrix vessicle, protein and metal binding
protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A
1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A
1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A
1bcw_A 2ran_A ...
Length = 320
Score = 103 bits (258), Expect = 2e-27
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 15/140 (10%)
Query: 16 AQRLENAMAG-MGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKR 74
AQ L A GT++ T I I+ TRS L + Y+ + +EE I +TSGD ++
Sbjct: 175 AQVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEK 234
Query: 75 LLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDL 134
LL+A +V+C+R AY A+ L +M G GT+D TLIR++V+RSEIDL
Sbjct: 235 LLLA--------------VVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDL 280
Query: 135 GDIKQDYLKMYETTLEERIK 154
DI+ ++ K + +L + I+
Sbjct: 281 LDIRHEFRKNFAKSLYQMIQ 300
Score = 99.7 bits (248), Expect = 7e-26
Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Query: 16 AQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRL 75
A+ L AM GMGT++ T+++I+ +R+ +I + ++ L + +K + +G ++ L
Sbjct: 20 AEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETL 79
Query: 76 LVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLG 135
+V+L +R + A L++A+ G GTN++ L I+ +R+ ++
Sbjct: 80 MVSL-----------------MRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQ 122
Query: 136 DIKQDYLKMYETTLEERIK 154
+IKQ Y++ YE LE++I
Sbjct: 123 NIKQVYMQEYEANLEDKIT 141
Score = 98.5 bits (245), Expect = 2e-25
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 1 MRKHLRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTL 60
+ ++C+R AY A+ L +M G GT+D TLIR++V+RSEIDL DI+ ++ K + +L
Sbjct: 236 LLAVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFAKSL 295
Query: 61 EERIKDDTSGDYKRLLVAL 79
+ I+ DTSGDY++ L+ L
Sbjct: 296 YQMIQKDTSGDYRKALLLL 314
Score = 91.9 bits (228), Expect = 5e-23
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 7 CVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKD 66
+R + A L++A+ G GTN++ L I+ +R+ ++ +IKQ Y++ YE LE++I
Sbjct: 83 LMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITG 142
Query: 67 DTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRII 126
+TSG ++RLLV L + + + V + L + E GT++ T I I+
Sbjct: 143 ETSGHFQRLLVVLLQ--ANRDPDGRVDEALVEKDAQVLFRAGEL---KWGTDEETFITIL 197
Query: 127 VTRSEIDLGDIKQDYLKMYETTLEERIK 154
TRS L + Y+ + +EE I
Sbjct: 198 GTRSVSHLRRVFDKYMTISGFQIEETID 225
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding
protein, membrane-binding protein, binding protein;
1.90A {Giardia intestinalis} PDB: 4evh_A
Length = 295
Score = 93.7 bits (233), Expect = 9e-24
Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 11/150 (7%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
+ D+ AQ + +A++G + ++ + D + Y +M++ L E
Sbjct: 68 MDLFSDRHEVRAQHIRDALSG-RNDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLVEDF 126
Query: 65 KDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIR 124
D L+ + AQRL A N LI
Sbjct: 127 MKDVGRKEDWCLLMEKWMAHERVSRP--------GSPEDEAQRL--DQAFDQKNTAYLID 176
Query: 125 IIVTRSEIDLGDIKQDYLKMYETTLEERIK 154
T + I + + ++E+ I
Sbjct: 177 FFGTVPSAEYRPIAEAFKAQNGKSIEQAIA 206
Score = 89.5 bits (222), Expect = 3e-22
Identities = 25/144 (17%), Positives = 39/144 (27%), Gaps = 19/144 (13%)
Query: 1 MRKHLRCVRDKSA-YLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETT 59
H R R S AQRL A N LI T + I + + +
Sbjct: 143 WMAHERVSRPGSPEDEAQRL--DQAFDQKNTAYLIDFFGTVPSAEYRPIAEAFKAQNGKS 200
Query: 60 LEERIKDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTND 119
+E+ I + + + + + A + A G
Sbjct: 201 IEQAIA--------------TIYTKTDYYTFYCAHFALLGMHRLAAYLINCACNDKGDEK 246
Query: 120 RTLIRIIVTRSEIDLGDIKQDYLK 143
R + RI + L K Y
Sbjct: 247 R-MRRITGMMVDKCL-GAKHAYKI 268
Score = 81.4 bits (201), Expect = 3e-19
Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 19/142 (13%)
Query: 13 AYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDY 72
+A L+ A+ ++ + I S I + Y+ Y L + IK G
Sbjct: 5 TDIANELKQAIDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIKKALKGGS 62
Query: 73 KRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEI 132
+ L ++ D+ AQ + +A++G + ++ +
Sbjct: 63 EESL----------------LMDLFSDRHEVRAQHIRDALSG-RNDHMAFFDTVILCTPE 105
Query: 133 DLGDIKQDYLKMYETTLEERIK 154
D + Y +M++ L E
Sbjct: 106 DWHETVAAYTRMFKKPLVEDFM 127
Score = 64.4 bits (157), Expect = 5e-13
Identities = 14/75 (18%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
+ A + A G R + RI + L K Y K+Y + I
Sbjct: 221 HFALLGMHRLAAYLINCACNDKGDEKR-MRRITGMMVDKCL-GAKHAY-KIYGD-MGTDI 276
Query: 65 KDDTSGDYKRLLVAL 79
+ +L L
Sbjct: 277 ERCFDKRMAPILRTL 291
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein;
1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Length = 337
Score = 94.3 bits (234), Expect = 1e-23
Identities = 27/149 (18%), Positives = 45/149 (30%), Gaps = 19/149 (12%)
Query: 10 DKSAYLAQRLENAMAGM---GTNDRTLIRIIVTRSEIDLGDIKQDYLKMYE-TTLEERIK 65
+ + A+ T IRI T + D + + Y Y +L ++
Sbjct: 163 HELEEDLVLVRKAIETKGVKKDEVSTWIRIFATYTRADFRQLHKMYSAKYNGDSLRAGVE 222
Query: 66 DDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRI 125
D+ G + + D A + A AG G++ L RI
Sbjct: 223 DEFQGLDEYAFKL--------------AHDFLYDPCCAAAFSMNVAFAGSGSDSNRLNRI 268
Query: 126 IVTRSEIDLGDIKQDYLKMYETTLEERIK 154
+ K Y K+Y +ER
Sbjct: 269 TAMHFR-ECKGCKYYYKKVYGQAFDERCA 296
Score = 93.9 bits (233), Expect = 1e-23
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
+ D A + A AG G++ L RI + K Y K+Y +ER
Sbjct: 237 HDFLYDPCCAAAFSMNVAFAGSGSDSNRLNRITAMHFR-ECKGCKYYYKKVYGQAFDERC 295
Query: 65 KDDTSGDYKRLLVAL 79
+ G Y + L
Sbjct: 296 ATELKGVYGDAIKLL 310
Score = 87.4 bits (216), Expect = 4e-21
Identities = 24/147 (16%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Query: 10 DKSAYLAQRLENAMAGMGTN--DRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDD 67
S + ++ + LI I + L ++++ + + T L+ +K
Sbjct: 7 QMSTGVTAVVQKVVEACQDESKRLDLIEIARSYPPNQLRNMQRTFQAITGTFLDAFLKKH 66
Query: 68 TSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIV 127
S D++ L++ L + ++ L + + A G GT+++ L+ +++
Sbjct: 67 LSKDFESLVLML-----------------YKPRAQLLCELIRGATKGAGTDEKCLVDVLL 109
Query: 128 TRSEIDLGDIKQDYLKMYETTLEERIK 154
T ++ +I+Q Y ++Y +L + ++
Sbjct: 110 TIETHEVREIRQLYYQLYNDSLGDVVR 136
Score = 82.7 bits (204), Expect = 1e-19
Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 5 LRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERI 64
L + ++ L + + A G GT+++ L+ +++T ++ +I+Q Y ++Y +L + +
Sbjct: 76 LMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDSLGDVV 135
Query: 65 KDDTSGDY--KRLLVALSETSGSLEDGYLSIVRCVRDKSAYLAQRLENAMAGM---GTND 119
+ D Y +L+ A++ D + + A+
Sbjct: 136 RKDCGDKYMWAKLINAVATGDRIPRD---------THELEEDLVLVRKAIETKGVKKDEV 186
Query: 120 RTLIRIIVTRSEIDLGDIKQDYLKMYE-TTLEERI 153
T IRI T + D + + Y Y +L +
Sbjct: 187 STWIRIFATYTRADFRQLHKMYSAKYNGDSLRAGV 221
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.4 bits (65), Expect = 0.70
Identities = 17/146 (11%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 42 EIDLGDIKQDYLKMYETTLEERIKD----DTSGDYKRLLVALSE-----TSGSLEDGYLS 92
+ + G+ + Y + + + + D D + +++ E S G L
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-DMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 93 IVRCVRDKSAYLAQRLENAMAGMGTNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEER 152
+ + K + Q+ + R + +++ + + +MY E+R
Sbjct: 67 LFWTLLSKQEEMVQKF------VEEVLRINYKFLMSPIKTEQRQPSMMT-RMYI---EQR 116
Query: 153 IKVRNEEE--------RRRWVWSIQR 170
++ N+ + R + +++
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQ 142
Score = 26.0 bits (56), Expect = 7.8
Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 24/120 (20%)
Query: 51 DYLKMY-----ETTLEERIKDDTSGDYKRLLVALSETSGSLEDGYLSIVRCVRDKSAYL- 104
D K T +E + +Y+++ LS V SA++
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS----------------VFPPSAHIP 388
Query: 105 AQRLENAMAGMGTND-RTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKVRNEEERRR 163
L + +D ++ + S ++ K+ + + LE ++K+ NE R
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVE-KQPKESTISIPSIYLELKVKLENEYALHR 447
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.4 bits (62), Expect = 0.87
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 18/42 (42%)
Query: 48 IK--QDYLKMYETTLEERIKDDTSGDYKRLLVALSETSGSLE 87
+K Q LK+Y DD++ AL+ ++E
Sbjct: 22 LKKLQASLKLYA--------DDSAP-------ALA-IKATME 47
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK
repeat, cytoplasm, GTP-binding, GTPase activation,
metal-binding, nucleotide-binding; NMR {Homo sapiens}
Length = 128
Score = 26.7 bits (58), Expect = 2.6
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 152 RIKVRNEEERRRWVWSIQR 170
+ + EER WV +I+
Sbjct: 103 HFEAASFEERDAWVQAIES 121
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology,
lipid transport; NMR {Homo sapiens}
Length = 94
Score = 25.8 bits (57), Expect = 3.7
Identities = 3/19 (15%), Positives = 14/19 (73%)
Query: 152 RIKVRNEEERRRWVWSIQR 170
++ ++ + R++W+ +I++
Sbjct: 73 YLRAQDPDHRQQWIDAIEQ 91
>2d9x_A Oxysterol binding protein-related protein 11; PH domain,
OSBP-related protein 11, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 120
Score = 26.0 bits (57), Expect = 4.4
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 153 IKVRNEEERRRWVWSIQR 170
++ + +ER+ WV +Q
Sbjct: 84 LRATDAKERQHWVSRLQI 101
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH
domain, lipid-binding, membrane, membrane protein; 1.90A
{Homo sapiens} PDB: 2kcj_A
Length = 103
Score = 25.2 bits (55), Expect = 7.2
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 153 IKVRNEEERRRWVWSIQR 170
+K N ER+RW+ ++
Sbjct: 73 MKAVNAAERQRWLVALGS 90
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine
decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP;
2.11A {Methanocaldococcus jannaschii}
Length = 397
Score = 25.8 bits (57), Expect = 8.8
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 87 EDGYLSIVRCVRDKSAYLAQRLEN 110
+G IV + + YL ++L+
Sbjct: 304 REGQRKIVNECMENTLYLYKKLKE 327
>2wzk_A Cullin-5, CUL-5; UBL conjugation pathway, HIV, phosphoprotein,
isopeptide bond, protein binding; 2.05A {Mus musculus}
Length = 391
Score = 25.6 bits (55), Expect = 9.2
Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 28 TNDRTLIRIIVTRSEIDLGDIKQDYLKMYETTLEERIKDDTSGDYKRLLVALSETSG 84
D L+ + S ++L +D L++Y E+ D T Y+ + + +G
Sbjct: 171 AFDSQLVIGVR-ESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNG 226
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.134 0.372
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,657,634
Number of extensions: 152943
Number of successful extensions: 573
Number of sequences better than 10.0: 1
Number of HSP's gapped: 504
Number of HSP's successfully gapped: 79
Length of query: 172
Length of database: 6,701,793
Length adjustment: 87
Effective length of query: 85
Effective length of database: 4,272,666
Effective search space: 363176610
Effective search space used: 363176610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (24.8 bits)