BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3632
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46461|NSF1_DROME Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=2
SV=1
Length = 745
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 100/112 (89%), Positives = 108/112 (96%)
Query: 6 RQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGT 65
RQSII+P +DF KMGIGGLDKEF +IFRRAFASRVFPPE+VEQLGC+HVKGILLYGPPGT
Sbjct: 205 RQSIINPDWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKGILLYGPPGT 264
Query: 66 GKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
GKTLMARQIG MLNAREPKIVNGPQ+LDKYVGESEANVRRLFA+AEEEEKR+
Sbjct: 265 GKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRL 316
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 57 ILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEA-NVRRLFADA 110
+L+ G P +GKT +A Q+ +M + K+ + P+ + Y ++ ++R++F DA
Sbjct: 539 VLVAGAPNSGKTALAAQLAKMSDFPFVKVCS-PEDMVGYTESAKCLHIRKIFDDA 592
>sp|P54351|NSF2_DROME Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2
SV=2
Length = 752
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/112 (88%), Positives = 107/112 (95%)
Query: 6 RQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGT 65
RQSII+P +DF KMGIGGLDKEF AIFRRAFASRVFPPE+VEQLG +HVKGILLYGPPGT
Sbjct: 210 RQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLYGPPGT 269
Query: 66 GKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
GKTLMARQIG MLNAREPKIVNGPQ+LDKYVGESEAN+RRLFA+AEEEEKR+
Sbjct: 270 GKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRL 321
>sp|Q5R410|NSF_PONAB Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1
Length = 744
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 90/112 (80%), Positives = 108/112 (96%)
Query: 6 RQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGT 65
RQSII+P ++F KMGIGGLDKEF+ IFRRAFASRVFPPE+VEQ+GC+HVKGILLYGPPG
Sbjct: 205 RQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGC 264
Query: 66 GKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
GKTL+ARQIG+MLNAREPK+VNGP++L+KYVGESEAN+R+LFADAEEE++R+
Sbjct: 265 GKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRL 316
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 57 ILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEA----NVRRLFADA 110
+LL GPP +GKT +A +I + N KI + DK +G SE ++++F DA
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSP----DKMIGFSETAKCQAMKKIFDDA 592
>sp|P46459|NSF_HUMAN Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3
Length = 744
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 90/112 (80%), Positives = 108/112 (96%)
Query: 6 RQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGT 65
RQSII+P ++F KMGIGGLDKEF+ IFRRAFASRVFPPE+VEQ+GC+HVKGILLYGPPG
Sbjct: 205 RQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGC 264
Query: 66 GKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
GKTL+ARQIG+MLNAREPK+VNGP++L+KYVGESEAN+R+LFADAEEE++R+
Sbjct: 265 GKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRL 316
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 57 ILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEA----NVRRLFADA 110
+LL GPP +GKT +A +I + N KI + DK +G SE ++++F DA
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSP----DKMIGFSETAKCQAMKKIFDDA 592
>sp|P18708|NSF_CRIGR Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1
Length = 744
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 90/112 (80%), Positives = 108/112 (96%)
Query: 6 RQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGT 65
RQSII+P ++F KMGIGGLDKEF+ IFRRAFASRVFPPE+VEQ+GC+HVKGILLYGPPG
Sbjct: 205 RQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGC 264
Query: 66 GKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
GKTL+ARQIG+MLNAREPK+VNGP++L+KYVGESEAN+R+LFADAEEE++R+
Sbjct: 265 GKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRL 316
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 57 ILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEA----NVRRLFADA 110
+LL GPP +GKT +A +I + N KI + DK +G SE ++++F DA
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSP----DKMIGFSETAKCQAMKKIFDDA 592
>sp|Q9QUL6|NSF_RAT Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1
Length = 744
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 90/112 (80%), Positives = 108/112 (96%)
Query: 6 RQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGT 65
RQSII+P ++F KMGIGGLDKEF+ IFRRAFASRVFPPE+VEQ+GC+HVKGILLYGPPG
Sbjct: 205 RQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGC 264
Query: 66 GKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
GKTL+ARQIG+MLNAREPK+VNGP++L+KYVGESEAN+R+LFADAEEE++R+
Sbjct: 265 GKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRL 316
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 57 ILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEA----NVRRLFADA 110
+LL GPP +GKT +A +I + N KI + DK +G SE ++++F DA
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSP----DKMIGFSETAKCQAMKKIFDDA 592
>sp|P46460|NSF_MOUSE Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2
Length = 744
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 90/112 (80%), Positives = 108/112 (96%)
Query: 6 RQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGT 65
RQSII+P ++F KMGIGGLDKEF+ IFRRAFASRVFPPE+VEQ+GC+HVKGILLYGPPG
Sbjct: 205 RQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGC 264
Query: 66 GKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
GKTL+ARQIG+MLNAREPK+VNGP++L+KYVGESEAN+R+LFADAEEE++R+
Sbjct: 265 GKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRL 316
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 57 ILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEA----NVRRLFADA 110
+LL GPP +GKT +A +I + N KI + DK +G SE ++++F DA
Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSP----DKMIGFSETAKCQAMKKIFDDA 592
>sp|Q94392|NSF_CAEEL Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2
Length = 824
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/111 (80%), Positives = 103/111 (92%)
Query: 7 QSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTG 66
+SII+P +DF +MGIGGLD EF+ IFRRAFASRVFPPE +EQLG +HV+GILL+GPPGTG
Sbjct: 283 RSIINPDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTG 342
Query: 67 KTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
KTLMARQIG+MLNAREPKIVNGPQ+LDKYVGESE+NVR+LFADAEEE +R
Sbjct: 343 KTLMARQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAEEEWRRC 393
>sp|Q9P7Q4|SEC18_SCHPO Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sec18 PE=1 SV=1
Length = 792
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 95/107 (88%)
Query: 7 QSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTG 66
+I+ P F F MGIGGLD EF+AIFRRAFASR+FPP +VE+LG HVKGILLYGPPGTG
Sbjct: 257 NAILQPGFKFEDMGIGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTG 316
Query: 67 KTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEE 113
KTL+ARQIG+MLNAREPKIVNGP++L+KYVG+SE NVR+LFADAE E
Sbjct: 317 KTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAERE 363
>sp|P18759|SEC18_YEAST Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC18 PE=1 SV=2
Length = 758
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 94/112 (83%), Gaps = 1/112 (0%)
Query: 3 VQPR-QSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYG 61
++PR ++I P F F +G+GGLDKEFT IFRRAFASR+FPP V+E+LG HVKG+LLYG
Sbjct: 222 LRPRSNAVIRPDFKFEDLGVGGLDKEFTKIFRRAFASRIFPPSVIEKLGISHVKGLLLYG 281
Query: 62 PPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEE 113
PPGTGKTL+AR+IG MLNA+EPKIVNGP++L KYVG SE N+R LF DAE E
Sbjct: 282 PPGTGKTLIARKIGTMLNAKEPKIVNGPEILSKYVGSSEENIRNLFKDAEAE 333
>sp|Q75JI3|NSF_DICDI Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1
Length = 738
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 90/107 (84%)
Query: 9 IISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKT 68
I + +DF MGIGGLD EF IFRRAF+SR+FPP +V++LG HVKG+LLYGPPGTGKT
Sbjct: 212 IFTSDWDFENMGIGGLDAEFRDIFRRAFSSRIFPPAIVKKLGVNHVKGMLLYGPPGTGKT 271
Query: 69 LMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEK 115
L+ARQIG+MLN REPK+V+GP +L+KYVG+SE N+R LF DAE E+K
Sbjct: 272 LIARQIGKMLNGREPKVVSGPSILNKYVGQSEENIRMLFRDAEIEQK 318
>sp|Q9M0Y8|NSF_ARATH Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2
Length = 742
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 71/104 (68%), Positives = 88/104 (84%)
Query: 14 FDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQ 73
F+ +GIGGL EF IFRRAFASRVFPP V +LG +HVKG+LL+GPPGTGKTLMARQ
Sbjct: 210 FNLESLGIGGLGAEFADIFRRAFASRVFPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQ 269
Query: 74 IGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEKRV 117
IG+MLN ++PKIVNGP+VL K+VGE+E NVR LFADAE++++ +
Sbjct: 270 IGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTL 313
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 58 LLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADA 110
LL GP G+GKT +A IG + KIV+ ++ A++ ++F DA
Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDA 586
>sp|P34732|SEC18_CANAX Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3
SV=2
Length = 794
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 86/110 (78%)
Query: 6 RQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGT 65
R+ II+P F +GIGGLD EF IFRRAF SR+ PPE+ E+L +H KG+LLYGPPGT
Sbjct: 262 RKQIINPDFKLEDLGIGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPPGT 321
Query: 66 GKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEEEK 115
GKTL+AR++ +MLN +EPKIVNGP++L KYVG SE N+R LF DAE E K
Sbjct: 322 GKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYK 371
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 27 EFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNAREPKI 85
+F R F +VV +H++ ILLYGPPG GKT +A + LN+ P I
Sbjct: 566 QFNQTIRNIFEKGQSIIDVVRSSETEHLRSILLYGPPGVGKTSIATTLA--LNSDFPFI 622
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 15 DFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQI 74
D IGGL +E + R + PE+ E+LG + KG+LL GPPGTGKTL+A+ +
Sbjct: 175 DVTYEDIGGLKEEVKKV-REMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAV 233
Query: 75 GQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
A ++NGP+++ KYVGE+E N+R++F +AEE
Sbjct: 234 ANEAGAN-FYVINGPEIMSKYVGETEENLRKIFEEAEE 270
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGL+ E R A + EV E++G + KG+LL+GPPGTGKTL+A+ + A
Sbjct: 454 IGGLE-EVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGA 512
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADA 110
V GP++ K+VGESE +R +F A
Sbjct: 513 NFIS-VKGPEIFSKWVGESEKAIREIFRKA 541
>sp|Q5UQE0|YR476_MIMIV Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R476 PE=3 SV=1
Length = 855
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
+GG+ KE + R SR + G + VKGI+L+GPPGTGKT ++R +G++L
Sbjct: 570 VGGISKELETVVRTLCLSRGILKQEYLARGLRPVKGIILHGPPGTGKTSLSRNLGKILGC 629
Query: 81 REP--KIVNGPQVLDKYVGESEANVRRLFADAEEEEKR 116
++++GP++ +K+VG SE+N+R +F A++ K+
Sbjct: 630 EGDRFRLMSGPEIFNKWVGGSESNIRAIFKPAKDAWKK 667
>sp|B2GIP2|ARC_KOCRD AAA ATPase forming ring-shaped complexes OS=Kocuria rhizophila
(strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)
GN=arc PE=3 SV=1
Length = 572
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 7 QSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTG 66
Q ++ D + IGGL + AI R A PE+ + G + KGILLYGPPG G
Sbjct: 214 QLVLEEVPDVSYTDIGGLGPQIEAI-RDAVELPHVHPEIFREHGLRPPKGILLYGPPGNG 272
Query: 67 KTLMARQIGQMLNAREPKI------------VNGPQVLDKYVGESEANVRRLFADAEEEE 114
KTL+A+ + + L R + GP++LDKYVGE+E +R +FA+A E+
Sbjct: 273 KTLIAKAVARSLAERSAAKAGRSRPEGYFLNIKGPELLDKYVGETERQIRSIFANAREQA 332
Query: 115 KR 116
R
Sbjct: 333 AR 334
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 4 QPRQSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPP 63
+P + + D IGGL +E + R + PE+ ++LG + KG+LLYGPP
Sbjct: 167 KPAEEVKRAVPDVTYEDIGGLKRELR-LVREMIELPLKHPELFQRLGIEPPKGVLLYGPP 225
Query: 64 GTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
GTGKTL+A+ + ++A I +GP+++ KY GESE +R +F +A+E
Sbjct: 226 GTGKTLIAKAVANEVDAHFIPI-SGPEIMSKYYGESEQRLREIFEEAKE 273
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 43 PEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEAN 102
PEV + +GILL+GPPGTGKTL+A+ + NA V GP++L K+VGESE +
Sbjct: 478 PEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFIS-VKGPELLSKWVGESEKH 536
Query: 103 VRRLFADA 110
VR +F A
Sbjct: 537 VREMFRKA 544
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGL ++ I R + PE+ E+LG KG++LYGPPGTGKTL+AR + A
Sbjct: 192 IGGLSEQLGKI-REMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGA 250
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
I NGP+++ KY G+SE +R +F+ AEE
Sbjct: 251 NFLSI-NGPEIMSKYYGQSEQKLREIFSKAEE 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGL+ + + + P+V ++LG + KG LLYGPPG GKTL+A+ + NA
Sbjct: 469 IGGLE-DVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNA 527
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
I GP+VL K+VGESE +R +F A++
Sbjct: 528 NFISI-KGPEVLSKWVGESEKAIREIFKKAKQ 558
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGL+ + AI R + PE+ + G +G+LLYGPPGTGKT++AR + + A
Sbjct: 355 IGGLNSQLKAI-REIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGA 413
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADA 110
++NGP+++ K+ GE+EA +R++FA+A
Sbjct: 414 YV-SVINGPEIISKFYGETEARLRQIFAEA 442
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGL+ ++A + P+ ++G Q KG+LLYGPPG KT++A+ + A
Sbjct: 629 IGGLEN-IKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKAL-----A 682
Query: 81 REPKI----VNGPQVLDKYVGESEANVRRLFADA 110
E + + GP++++KYVGESE VR +F A
Sbjct: 683 NESGLNFLAIKGPELMNKYVGESERAVREIFRKA 716
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 43 PEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEAN 102
PE+ ++LG KGILLYGPPGTGKTL+AR + + A VNGP+++ K+ GESE
Sbjct: 235 PELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYF-ITVNGPEIMSKFYGESEQR 293
Query: 103 VRRLFADAEE 112
+R +F +AEE
Sbjct: 294 IREIFKEAEE 303
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 12 PSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMA 71
P ++N IGGLD R A + PE+ + G KGILL+GPPGTGKT++A
Sbjct: 482 PKVNWN--DIGGLDN-VKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLA 538
Query: 72 RQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ + A V GP++L K+VGESE +R +F A +
Sbjct: 539 KAVATESGANFIA-VRGPEILSKWVGESEKAIREIFRKARQ 578
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGL + AI R + PE+ + G +G+LLYGPPGTGKT++AR + + A
Sbjct: 355 IGGLSSQLKAI-REIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGA 413
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADA 110
++NGP+++ K+ GE+EA +R++FA+A
Sbjct: 414 Y-VSVINGPEIISKFYGETEAKLRQIFAEA 442
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 43 PEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNAREPKI----VNGPQVLDKYVGE 98
PE ++G Q KG+LLYGPPG KT++A+ + A E + + GP++++KYVGE
Sbjct: 650 PESFIRMGIQPPKGVLLYGPPGCSKTMIAKAL-----ANESGLNFLAIKGPELMNKYVGE 704
Query: 99 SEANVRRLFADA 110
SE VR F A
Sbjct: 705 SERAVRETFRKA 716
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 20 GIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLN 79
+GGLDKE ++ + A + P + G +GILL+GPPGTGKT++ R + N
Sbjct: 246 AVGGLDKEIESL-KSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSN 304
Query: 80 AREPKIVNGPQVLDKYVGESEANVRRLFADA 110
A I NGP ++ KY+GE+EA +R +F +A
Sbjct: 305 AHVLTI-NGPSIVSKYLGETEAALRDIFNEA 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 44 EVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNAREPKI----VNGPQVLDKYVGES 99
E +LG KG+LLYGPPG KTL A+ + A E I V GP++ +KYVGES
Sbjct: 540 ETFARLGISAPKGVLLYGPPGCSKTLTAKAL-----ATESGINFLAVKGPEIFNKYVGES 594
Query: 100 EANVRRLFADA 110
E +R +F A
Sbjct: 595 ERAIREIFRKA 605
>sp|C5CBU4|ARC_MICLC AAA ATPase forming ring-shaped complexes OS=Micrococcus luteus
(strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 /
NCIMB 9278 / NCTC 2665 / VKM Ac-2230) GN=arc PE=3 SV=1
Length = 584
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Query: 12 PSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMA 71
P F IGGL + I R A PEV + G + KGI+LYGPPGTGKT++A
Sbjct: 243 PDVTFED--IGGLGPQIDRI-REAVEIPFLHPEVYREHGLRAPKGIMLYGPPGTGKTMLA 299
Query: 72 RQIGQMLNAREPK-------IVNGPQVLDKYVGESEANVRRLFADAEEE 113
+ + L+AR V GP++L+KYVGE+E +R +F A E+
Sbjct: 300 KAVANALSARSADGERSFFLNVKGPELLNKYVGETERQIRVIFDRAREK 348
>sp|A9WSI4|ARC_RENSM Proteasome-associated ATPase OS=Renibacterium salmoninarum (strain
ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB
2235) GN=arc PE=3 SV=1
Length = 594
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Query: 15 DFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQI 74
D + IGGL + I R A P++ + G + KGILLYGPPG GKTL+A+ +
Sbjct: 234 DISYHDIGGLGPQIEQI-RDAVELPFLHPDLYREHGLKAPKGILLYGPPGCGKTLIAKAV 292
Query: 75 GQMLNAREPK------------IVNGPQVLDKYVGESEANVRRLFADAEEE 113
L AR + + GP++LDKYVGE+E +R +FA A E+
Sbjct: 293 ANSLAARAAERNGLKETKSFFLNIKGPELLDKYVGETERKIRLIFARAREK 343
>sp|B8H8L3|ARC_ARTCA Proteasome-associated ATPase OS=Arthrobacter chlorophenolicus
(strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=arc
PE=3 SV=1
Length = 583
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Query: 15 DFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQI 74
D IGGL + I R A P++ + G + KGILLYGPPG GKTL+A+ +
Sbjct: 223 DITYEDIGGLGPQIEQI-RDAVELPFLHPDLYREHGLKAPKGILLYGPPGCGKTLIAKAV 281
Query: 75 GQMLNAREPK------------IVNGPQVLDKYVGESEANVRRLFADAEEE 113
L AR + + GP++LDKYVGE+E ++R +FA A E+
Sbjct: 282 ANSLAARAAERSGNVDLKSYFLNIKGPELLDKYVGETERHIRLIFARAREK 332
>sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpt4 PE=3 SV=2
Length = 388
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 11/122 (9%)
Query: 1 MEVQPRQ--------SIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQ 52
M + PR+ SI P D + G+GGL+++ + R + PE+ ++G +
Sbjct: 107 MRILPREVDPLVYNMSIEDPG-DISFAGVGGLNEQIREL-REVIELPLKNPELFLRVGIK 164
Query: 53 HVKGILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
KG+LLYGPPGTGKTL+AR + L K+V+ ++DKY+GES +R +F A+E
Sbjct: 165 PPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSA-IVDKYIGESARIIREMFGYAKE 223
Query: 113 EE 114
E
Sbjct: 224 HE 225
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGLD++ I R + PE+ E LG KG+LLYGPPGTGKTL+AR +
Sbjct: 198 IGGLDEQIKEI-REVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQC 256
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ + V+G +++ KY+GE VR LF A E
Sbjct: 257 KFIR-VSGSELVQKYIGEGSRLVRELFIMARE 287
>sp|O13764|PEX6_SCHPO Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex6 PE=3 SV=1
Length = 948
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGL+ E + R + PE+ Q G + G+LLYGPPGTGKTL+A+ + L+
Sbjct: 657 IGGLE-EAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSL 714
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADA 110
E + GP++L+ YVGESEANVR +F A
Sbjct: 715 -EFVSIKGPELLNMYVGESEANVRNVFEKA 743
>sp|A1R6Q4|ARC_ARTAT Proteasome-associated ATPase OS=Arthrobacter aurescens (strain TC1)
GN=arc PE=3 SV=1
Length = 602
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Query: 15 DFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQI 74
D IGGL + I R A P++ + G + KGILLYGPPG GKTL+A+ +
Sbjct: 242 DITYQDIGGLGPQIEQI-RDAVELPFLHPDLYREHGLKAPKGILLYGPPGCGKTLIAKAV 300
Query: 75 GQMLNAREPK------------IVNGPQVLDKYVGESEANVRRLFADAEEE 113
L AR + + GP++LDKYVGE+E ++R +F+ A E+
Sbjct: 301 ANSLAARAAERAGNTDLKSYFLNIKGPELLDKYVGETERHIRLIFSRAREK 351
>sp|P41836|PRS8_SCHPO 26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=let1 PE=3 SV=1
Length = 403
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
+GGL+K+ I + V PE+ E LG KGILLYGPPGTGKTL+AR + +
Sbjct: 147 VGGLEKQIKEI-KEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDC 205
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ + V+G +++ KY+GE VR LF A E
Sbjct: 206 KFIR-VSGSELVQKYIGEGSRMVRELFVMARE 236
>sp|P34124|PRS8_DICDI 26S protease regulatory subunit 8 OS=Dictyostelium discoideum
GN=psmC5 PE=1 SV=2
Length = 403
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
+GGLDK+ I + + PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 147 VGGLDKQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 205
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ V+G +++ KY+GE VR LF A E
Sbjct: 206 TFIR-VSGSELVQKYIGEGSRMVRELFIMARE 236
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 15 DFNKMG---IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMA 71
+ N++G IGG K+ I R + P++ + +G + +GIL+YGPPGTGKTLMA
Sbjct: 218 NLNEVGYDDIGGCRKQMAQI-RELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMA 276
Query: 72 RQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
R + A ++NGP+++ K GESE+N+R+ F +AE+
Sbjct: 277 RAVANETGAF-FFLINGPEIMSKMAGESESNLRKAFEEAEK 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 21 IGGLDKEFTAIFRRAFASRVFP---PEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQM 77
IGGL++ + R S +P PE ++ G +G+L YGPPGTGKT++A+ +
Sbjct: 501 IGGLEE----VKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANE 556
Query: 78 LNAREPKIVNGPQVLDKYVGESEANVRRLFADA 110
A V GP++L + GESE+N+R +F A
Sbjct: 557 CAANFIS-VKGPELLSMWFGESESNIRDIFDKA 588
>sp|Q4JVP5|ARC_CORJK AAA ATPase forming ring-shaped complexes OS=Corynebacterium
jeikeium (strain K411) GN=arc PE=3 SV=1
Length = 517
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 8/107 (7%)
Query: 15 DFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQI 74
D IGGL ++ T I R A PE+ + G + KG+LLYGPPG GKTL+A+ +
Sbjct: 185 DVTYDDIGGLGQQITQI-RDAVELPFLHPEIYTRYGLRPPKGVLLYGPPGNGKTLIAKAV 243
Query: 75 GQML-NAREPKIVN--GPQVLDKYVGESEANVRRLFADAEEEEKRVS 118
L + P +N GP++L+K+VGE+E +R +F E+ +RV+
Sbjct: 244 ANSLAQSDSPYFLNIKGPELLNKFVGETERQIRAIF----EQARRVA 286
>sp|A0JWY3|ARC_ARTS2 Proteasome-associated ATPase OS=Arthrobacter sp. (strain FB24)
GN=arc PE=3 SV=1
Length = 594
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Query: 15 DFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQI 74
D IGGL + I R A P++ + G + KGILLYGPPG GKTL+A+ +
Sbjct: 234 DITYEDIGGLGPQIEQI-RDAVELPFLHPDLYREHGLKAPKGILLYGPPGCGKTLIAKAV 292
Query: 75 GQMLNAREPK------------IVNGPQVLDKYVGESEANVRRLFADAEEE 113
L AR + + GP++LDKYVGE+E ++R +F+ A E+
Sbjct: 293 ANSLAARAAERTGNVDLKSYFLNIKGPELLDKYVGETERHIRLIFSRAREK 343
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGLD++ I + + PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 163 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 221
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ V+G +++ KY+GE VR LF A E
Sbjct: 222 TFIR-VSGSELVQKYIGEGSRMVRELFVMARE 252
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGLD++ I + + PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 163 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 221
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ V+G +++ KY+GE VR LF A E
Sbjct: 222 TFIR-VSGSELVQKYIGEGSRMVRELFVMARE 252
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Query: 12 PSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMA 71
P+ +N IGGLDK+ + R A + PE+ E++G + KG+LLYGPPG GKTLMA
Sbjct: 134 PTVSYND--IGGLDKQLQEL-REAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMA 190
Query: 72 RQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEE 113
+ + +NA ++V G +++ K++GE V LF A+E+
Sbjct: 191 KALAHEVNATFIRVV-GSELVRKFIGEGARLVHELFELAKEK 231
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGLDK+ I + V PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ V+G +++ K++GE VR LF A E
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMARE 240
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGLDK+ I + V PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ V+G +++ K++GE VR LF A E
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMARE 240
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGLDK+ I + V PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ V+G +++ K++GE VR LF A E
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMARE 240
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGLDK+ I + V PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ V+G +++ K++GE VR LF A E
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMARE 240
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGLDK+ I + V PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 151 IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 209
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ V+G +++ K++GE VR LF A E
Sbjct: 210 TFIR-VSGSELVQKFIGEGARMVRELFVMARE 240
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 15 DFNKMG---IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMA 71
+ N++G IGG K+ I R + P++ + +G + +G+L+YGPPGTGKTLMA
Sbjct: 207 NMNEVGYDDIGGCRKQMAQI-REMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMA 265
Query: 72 RQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
R + A ++NGP+V+ K GESE+N+R+ F +AE+
Sbjct: 266 RAVANETGAF-FFLINGPEVMSKMAGESESNLRKAFEEAEK 305
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
+GGLD E + V P+ + G KG+L YGPPGTGKTL+A+ + ++A
Sbjct: 489 VGGLD-EIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSA 547
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADA 110
V GP++L + GESE+N+R +F A
Sbjct: 548 NFIS-VKGPELLSMWYGESESNIRDIFDKA 576
>sp|P33760|PEX6_YEAST Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX6 PE=1 SV=1
Length = 1030
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 43 PEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEAN 102
PE+ G + GIL YGPPGTGKTLMA+ I + V GP++L+ Y+GESEAN
Sbjct: 755 PELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFS-VKGPELLNMYIGESEAN 812
Query: 103 VRRLFADAEE 112
VRR+F A E
Sbjct: 813 VRRVFQKARE 822
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 7 QSIISPSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTG 66
+ I P +N IGGL+K+ + R A + PE+ EQ+G + KG+LLYGPPG G
Sbjct: 128 EVIERPKVTYND--IGGLEKQLQEL-REAIELPLKHPELFEQVGIEPPKGVLLYGPPGCG 184
Query: 67 KTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEE 113
KTLMA+ + +NA ++V G +++ K++GE V LF A+E+
Sbjct: 185 KTLMAKAVANHVNATFIRVV-GSELVRKFIGEGARLVHELFELAKEK 230
>sp|C3PGA0|ARC_CORA7 AAA ATPase forming ring-shaped complexes OS=Corynebacterium
aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)
GN=arc PE=3 SV=1
Length = 524
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 8/105 (7%)
Query: 15 DFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQI 74
D + IGGLD++ + I R + PE+ + Q KG+LLYGPPG GKTL+A+ +
Sbjct: 188 DVSYEDIGGLDEQISLI-RDSVELPFLHPELYRKYDLQPPKGVLLYGPPGCGKTLIAKAV 246
Query: 75 GQMLN----AREPKI---VNGPQVLDKYVGESEANVRRLFADAEE 112
L+ A P V GP++L+K+VGE+E +R +F A E
Sbjct: 247 AHSLSVSLGATAPSYFLNVKGPELLNKFVGETERRIRLIFERARE 291
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 43 PEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNAREPKIVNGPQVLDKYVGESEAN 102
P++ + +G + +GIL+YGPPGTGKTLMAR + A ++NGP+++ K GESE+N
Sbjct: 247 PQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFF-FLINGPEIMSKMAGESESN 305
Query: 103 VRRLFADAEE 112
+R+ F +AE+
Sbjct: 306 LRKAFEEAEK 315
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
IGGL +E R V E + G KG+L +GPPGTGKTL+A+ I +A
Sbjct: 499 IGGL-EEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSA 557
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADA 110
V GP++L + GESE+NVR +F A
Sbjct: 558 NFIS-VKGPELLSMWFGESESNVRDIFDKA 586
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 21 IGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLNA 80
+GGL K+ I + V PE+ E LG KG++LYGPPGTGKTL+AR + +
Sbjct: 150 VGGLTKQIKEI-KEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDC 208
Query: 81 REPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
+ + V+G +++ KY+GE VR LF A E
Sbjct: 209 KFIR-VSGAELVQKYIGEGSRMVRELFVMARE 239
>sp|A3CV35|PAN_METMJ Proteasome-activating nucleotidase OS=Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1
Length = 412
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 20 GIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMARQIGQMLN 79
IGGL+ + I R A + P++ E++G KG+LLYGPPGTGKTL+AR + N
Sbjct: 154 NIGGLEPQIEEI-REAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTN 212
Query: 80 AREPKIVNGPQVLDKYVGESEANVRRLFADAEE 112
A ++V G +++ KY+GE VR LF A++
Sbjct: 213 AHFLRVV-GSELVQKYIGEGARLVRELFDLAKQ 244
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 12 PSFDFNKMGIGGLDKEFTAIFRRAFASRVFPPEVVEQLGCQHVKGILLYGPPGTGKTLMA 71
P+ +N IGGL K+ + R A + PE+ E++G KG+LLYGPPG GKTLMA
Sbjct: 132 PNVTYND--IGGLKKQLQEL-REAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMA 188
Query: 72 RQIGQMLNAREPKIVNGPQVLDKYVGESEANVRRLFADAEEE 113
+ I +NA ++V G +++ KY+GE V LF A+E+
Sbjct: 189 KAIAHEVNATFIRVV-GSELVRKYIGEGARLVHELFELAKEK 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,806,197
Number of Sequences: 539616
Number of extensions: 1862981
Number of successful extensions: 13033
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1980
Number of HSP's successfully gapped in prelim test: 500
Number of HSP's that attempted gapping in prelim test: 10516
Number of HSP's gapped (non-prelim): 2630
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)