Query psy3639
Match_columns 113
No_of_seqs 173 out of 1983
Neff 11.8
Searched_HMMs 46136
Date Fri Aug 16 21:49:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3639.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3639hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0263|consensus 100.0 9.7E-29 2.1E-33 156.3 12.0 112 1-113 538-649 (707)
2 KOG0272|consensus 100.0 7.3E-29 1.6E-33 148.6 7.3 111 2-113 265-375 (459)
3 KOG0271|consensus 99.9 9E-27 2E-31 138.8 10.7 110 3-113 120-235 (480)
4 KOG0266|consensus 99.9 7.7E-26 1.7E-30 142.0 14.8 111 2-113 207-318 (456)
5 PTZ00421 coronin; Provisional 99.9 3.2E-25 6.9E-30 139.7 15.2 111 3-113 80-198 (493)
6 KOG0286|consensus 99.9 1.5E-25 3.3E-30 129.6 12.1 111 2-113 149-259 (343)
7 KOG0272|consensus 99.9 7.9E-26 1.7E-30 135.7 10.1 110 2-112 307-417 (459)
8 KOG0263|consensus 99.9 6E-26 1.3E-30 143.8 9.9 110 3-113 498-607 (707)
9 KOG0291|consensus 99.9 3.7E-25 8E-30 140.6 12.6 111 1-112 353-507 (893)
10 KOG0284|consensus 99.9 2.3E-25 5E-30 133.4 9.7 112 1-113 183-294 (464)
11 KOG0271|consensus 99.9 3E-25 6.6E-30 132.4 10.0 109 2-111 371-479 (480)
12 KOG0319|consensus 99.9 2.6E-24 5.7E-29 136.2 12.8 112 1-113 466-577 (775)
13 KOG0266|consensus 99.9 1.6E-23 3.4E-28 131.7 14.2 111 2-113 250-364 (456)
14 KOG0279|consensus 99.9 1.4E-23 3.1E-28 120.7 12.8 109 4-113 69-180 (315)
15 KOG0273|consensus 99.9 7.3E-24 1.6E-28 128.9 11.2 113 1-113 362-482 (524)
16 KOG0316|consensus 99.9 1.7E-23 3.6E-28 118.5 10.7 111 2-113 21-131 (307)
17 KOG0285|consensus 99.9 1.4E-23 3E-28 124.6 10.4 111 2-113 155-265 (460)
18 PTZ00420 coronin; Provisional 99.9 1.5E-22 3.2E-27 129.0 15.4 110 3-113 79-197 (568)
19 KOG0295|consensus 99.9 3.7E-23 8.1E-28 122.6 11.0 112 2-113 239-364 (406)
20 KOG0279|consensus 99.9 1E-22 2.2E-27 117.3 12.4 110 3-113 110-222 (315)
21 KOG0275|consensus 99.9 1.1E-23 2.3E-28 124.3 4.3 110 3-113 268-378 (508)
22 KOG0269|consensus 99.9 2E-22 4.3E-27 128.5 9.9 110 3-112 138-249 (839)
23 KOG0286|consensus 99.9 9.1E-22 2E-26 114.2 11.4 108 4-112 192-302 (343)
24 KOG0283|consensus 99.9 1.5E-22 3.2E-27 129.3 8.6 107 3-112 272-439 (712)
25 KOG0319|consensus 99.9 6.6E-22 1.4E-26 125.5 11.4 108 3-111 510-617 (775)
26 KOG0315|consensus 99.9 1.3E-21 2.8E-26 111.6 10.5 109 2-113 44-154 (311)
27 KOG0302|consensus 99.9 2.1E-21 4.5E-26 115.8 11.8 107 4-112 263-377 (440)
28 KOG0273|consensus 99.9 2.1E-21 4.5E-26 118.4 11.9 109 2-112 239-388 (524)
29 KOG0281|consensus 99.9 1.7E-22 3.6E-27 120.0 6.9 104 5-113 325-428 (499)
30 KOG0315|consensus 99.9 2.2E-21 4.8E-26 110.7 11.1 110 2-113 87-245 (311)
31 KOG0276|consensus 99.9 3.4E-21 7.4E-26 121.1 12.8 113 1-113 100-215 (794)
32 PTZ00421 coronin; Provisional 99.9 1E-20 2.2E-25 119.6 15.0 111 2-113 129-245 (493)
33 KOG0318|consensus 99.9 7.7E-21 1.7E-25 117.3 14.0 111 1-112 193-349 (603)
34 KOG0282|consensus 99.9 2.5E-22 5.3E-27 122.5 7.3 110 2-113 218-330 (503)
35 KOG0645|consensus 99.9 1.3E-20 2.8E-25 108.4 13.4 110 2-112 65-179 (312)
36 KOG0264|consensus 99.9 3.4E-21 7.3E-26 116.5 11.2 110 4-113 233-347 (422)
37 KOG0285|consensus 99.9 2E-21 4.4E-26 115.6 9.7 109 4-113 199-307 (460)
38 KOG0284|consensus 99.9 6.9E-22 1.5E-26 118.7 7.6 110 2-112 226-336 (464)
39 KOG0265|consensus 99.9 7E-21 1.5E-25 110.7 11.1 111 2-113 51-163 (338)
40 KOG0277|consensus 99.9 1.1E-20 2.4E-25 108.1 11.7 104 10-113 117-221 (311)
41 KOG0277|consensus 99.9 4.3E-21 9.4E-26 109.7 10.0 110 4-113 66-178 (311)
42 KOG0292|consensus 99.9 4.9E-21 1.1E-25 124.3 11.1 110 2-112 55-164 (1202)
43 KOG0282|consensus 99.9 4.4E-21 9.6E-26 117.1 10.0 110 3-113 263-372 (503)
44 PLN00181 protein SPA1-RELATED; 99.9 5E-20 1.1E-24 122.4 15.8 109 4-113 538-648 (793)
45 KOG0647|consensus 99.9 1.1E-20 2.3E-25 110.1 10.6 111 1-113 30-145 (347)
46 PLN00181 protein SPA1-RELATED; 99.9 4.4E-20 9.5E-25 122.6 14.8 111 2-113 487-606 (793)
47 KOG0295|consensus 99.9 3.6E-20 7.9E-25 110.1 12.8 103 10-113 304-406 (406)
48 KOG0645|consensus 99.9 5.6E-20 1.2E-24 105.8 13.2 110 2-112 109-224 (312)
49 KOG0283|consensus 99.9 1.4E-20 3.1E-25 120.4 11.6 109 3-113 372-481 (712)
50 KOG0289|consensus 99.9 4.8E-20 1.1E-24 111.7 13.1 110 3-113 308-419 (506)
51 KOG0275|consensus 99.9 9.7E-22 2.1E-26 116.2 5.2 110 2-112 217-335 (508)
52 KOG0276|consensus 99.9 7.9E-21 1.7E-25 119.5 9.5 110 3-112 145-256 (794)
53 KOG0310|consensus 99.9 4.7E-21 1E-25 116.9 8.3 110 4-113 74-184 (487)
54 KOG0294|consensus 99.9 2.4E-20 5.1E-25 109.2 10.6 111 2-112 45-156 (362)
55 KOG0318|consensus 99.8 7.1E-20 1.5E-24 113.1 13.0 110 2-112 151-264 (603)
56 KOG0278|consensus 99.8 6.4E-20 1.4E-24 105.0 11.7 106 5-112 150-296 (334)
57 KOG0313|consensus 99.8 2.4E-20 5.3E-25 111.3 10.2 109 2-111 304-416 (423)
58 KOG0973|consensus 99.8 3.7E-20 8E-25 121.2 11.5 111 1-112 72-200 (942)
59 PTZ00420 coronin; Provisional 99.8 4.5E-19 9.9E-24 113.3 15.3 110 2-113 129-248 (568)
60 KOG0310|consensus 99.8 1.8E-19 3.8E-24 110.2 12.7 109 2-112 114-224 (487)
61 cd00200 WD40 WD40 domain, foun 99.8 7E-19 1.5E-23 103.3 14.5 111 2-113 13-123 (289)
62 cd00200 WD40 WD40 domain, foun 99.8 4.6E-19 1E-23 104.1 13.4 109 2-111 181-289 (289)
63 KOG0265|consensus 99.8 1.2E-19 2.7E-24 105.6 10.4 109 4-113 96-204 (338)
64 KOG0305|consensus 99.8 1.5E-19 3.2E-24 112.6 11.1 111 2-112 305-460 (484)
65 KOG0303|consensus 99.8 1.4E-19 3.1E-24 108.8 10.0 108 5-113 88-203 (472)
66 KOG0291|consensus 99.8 4.3E-19 9.2E-24 113.6 12.7 109 4-113 313-422 (893)
67 KOG0289|consensus 99.8 3E-19 6.6E-24 108.3 11.2 108 3-111 352-460 (506)
68 KOG1034|consensus 99.8 1.9E-19 4.2E-24 106.0 9.5 104 10-113 105-211 (385)
69 KOG0264|consensus 99.8 2.9E-19 6.4E-24 108.2 10.4 109 5-113 184-303 (422)
70 KOG0308|consensus 99.8 4E-19 8.7E-24 112.1 10.6 111 2-113 121-243 (735)
71 KOG0293|consensus 99.8 5.2E-19 1.1E-23 107.0 10.4 109 4-113 230-342 (519)
72 KOG1445|consensus 99.8 8.3E-20 1.8E-24 115.7 7.3 107 6-112 635-749 (1012)
73 KOG0296|consensus 99.8 2.1E-18 4.5E-23 102.7 12.4 111 2-113 110-220 (399)
74 KOG0772|consensus 99.8 2.9E-19 6.4E-24 110.5 8.9 111 2-113 272-394 (641)
75 KOG0274|consensus 99.8 2.3E-18 5.1E-23 109.6 12.8 106 4-113 295-400 (537)
76 KOG0267|consensus 99.8 6.1E-20 1.3E-24 116.8 4.9 110 2-112 74-183 (825)
77 KOG0316|consensus 99.8 3.1E-18 6.6E-23 97.4 10.6 106 5-111 66-211 (307)
78 KOG0296|consensus 99.8 9.6E-18 2.1E-22 99.9 13.2 109 3-112 69-177 (399)
79 KOG0292|consensus 99.8 6.9E-19 1.5E-23 114.5 8.7 109 3-112 14-122 (1202)
80 KOG0274|consensus 99.8 9.7E-18 2.1E-22 106.8 13.6 104 5-113 256-359 (537)
81 KOG1332|consensus 99.8 4.3E-18 9.3E-23 97.1 10.8 107 6-112 19-133 (299)
82 KOG1274|consensus 99.8 6.7E-18 1.5E-22 109.7 12.8 112 1-113 99-262 (933)
83 KOG0643|consensus 99.8 1.9E-17 4.1E-22 95.6 13.0 77 2-79 14-90 (327)
84 KOG0281|consensus 99.8 6.7E-19 1.5E-23 104.9 7.3 106 3-113 200-305 (499)
85 KOG0313|consensus 99.8 2.9E-18 6.3E-23 102.6 9.8 105 6-113 268-376 (423)
86 KOG0305|consensus 99.8 2.2E-18 4.8E-23 107.5 9.6 108 2-112 221-330 (484)
87 KOG0293|consensus 99.8 1.1E-18 2.4E-23 105.6 7.5 109 4-112 401-512 (519)
88 KOG0640|consensus 99.8 3.5E-18 7.6E-23 100.6 9.3 110 1-111 175-289 (430)
89 KOG0640|consensus 99.8 7.7E-18 1.7E-22 99.2 10.7 110 2-112 220-334 (430)
90 KOG0308|consensus 99.8 8.3E-18 1.8E-22 106.3 11.4 109 4-113 177-285 (735)
91 KOG0269|consensus 99.8 9.1E-19 2E-23 112.1 7.2 105 9-113 99-207 (839)
92 KOG1407|consensus 99.8 9E-18 2E-22 96.6 10.0 110 3-113 25-136 (313)
93 KOG0643|consensus 99.8 6.5E-18 1.4E-22 97.5 9.4 109 3-112 152-316 (327)
94 KOG1446|consensus 99.8 4.4E-17 9.4E-22 95.4 12.9 111 2-113 18-130 (311)
95 KOG0646|consensus 99.8 3.3E-17 7.2E-22 100.0 12.9 112 1-112 126-306 (476)
96 KOG0306|consensus 99.8 1.4E-17 3E-22 106.8 11.7 109 3-112 513-621 (888)
97 KOG1273|consensus 99.8 1.1E-17 2.4E-22 98.6 10.4 101 2-104 27-128 (405)
98 KOG0641|consensus 99.8 2.9E-17 6.3E-22 93.4 11.8 107 6-113 190-303 (350)
99 KOG1446|consensus 99.8 5.4E-17 1.2E-21 95.0 12.9 108 3-113 61-170 (311)
100 KOG0300|consensus 99.8 4.2E-18 9.2E-23 100.7 8.2 109 3-113 277-386 (481)
101 KOG0306|consensus 99.8 5.9E-18 1.3E-22 108.4 9.3 109 3-112 555-663 (888)
102 KOG0299|consensus 99.8 1.1E-17 2.3E-22 102.0 9.0 109 3-112 207-315 (479)
103 KOG0639|consensus 99.7 6.7E-18 1.5E-22 104.6 7.2 111 2-113 469-581 (705)
104 KOG0302|consensus 99.7 1.1E-17 2.5E-22 100.1 7.9 109 4-113 217-332 (440)
105 KOG0646|consensus 99.7 3.2E-17 7E-22 100.1 9.8 109 3-112 86-205 (476)
106 KOG1036|consensus 99.7 9.8E-17 2.1E-21 93.8 11.3 107 3-113 18-124 (323)
107 KOG0294|consensus 99.7 1.4E-16 3.1E-21 93.7 11.7 111 2-113 87-281 (362)
108 KOG4283|consensus 99.7 4.6E-17 1E-21 95.3 9.1 103 10-112 158-275 (397)
109 KOG0267|consensus 99.7 9.4E-18 2E-22 107.1 6.2 109 4-113 118-226 (825)
110 KOG0270|consensus 99.7 1.6E-16 3.5E-21 96.6 11.1 102 11-113 257-360 (463)
111 KOG1407|consensus 99.7 2E-16 4.4E-21 91.1 10.5 108 4-112 153-260 (313)
112 KOG1539|consensus 99.7 3.4E-16 7.3E-21 101.3 12.6 110 2-112 452-605 (910)
113 KOG0278|consensus 99.7 1.7E-17 3.6E-22 95.2 6.0 108 2-112 104-212 (334)
114 KOG2110|consensus 99.7 1.1E-15 2.4E-20 91.4 13.8 110 3-113 132-248 (391)
115 KOG0639|consensus 99.7 3E-17 6.5E-22 101.8 7.1 107 4-112 515-621 (705)
116 KOG0973|consensus 99.7 1.6E-16 3.5E-21 104.5 10.5 109 4-113 19-159 (942)
117 PF08662 eIF2A: Eukaryotic tra 99.7 2.1E-15 4.6E-20 85.7 13.7 104 3-112 64-178 (194)
118 KOG1539|consensus 99.7 7E-17 1.5E-21 104.4 8.5 103 7-111 543-646 (910)
119 KOG2394|consensus 99.7 8.5E-17 1.8E-21 100.1 8.4 90 2-92 294-383 (636)
120 KOG4283|consensus 99.7 7.2E-16 1.6E-20 90.4 10.8 104 9-113 113-219 (397)
121 KOG2096|consensus 99.7 6.5E-16 1.4E-20 91.4 10.5 105 7-113 196-308 (420)
122 KOG1310|consensus 99.7 2.7E-16 5.8E-21 98.5 9.4 113 1-113 53-178 (758)
123 KOG2445|consensus 99.7 3.5E-15 7.5E-20 87.7 13.2 111 2-112 17-143 (361)
124 KOG0322|consensus 99.7 2.7E-16 5.9E-21 90.7 8.5 67 45-112 256-322 (323)
125 KOG0270|consensus 99.7 9.3E-17 2E-21 97.7 6.7 105 9-113 191-317 (463)
126 KOG1273|consensus 99.7 2.3E-15 5.1E-20 88.9 12.0 112 1-113 68-226 (405)
127 KOG0642|consensus 99.7 6.9E-16 1.5E-20 96.2 9.9 109 3-112 299-425 (577)
128 KOG0641|consensus 99.7 5.8E-15 1.3E-19 84.1 12.2 111 2-113 235-349 (350)
129 KOG0644|consensus 99.7 3.7E-17 8.1E-22 106.1 3.7 107 2-113 194-300 (1113)
130 KOG0268|consensus 99.7 2.1E-16 4.6E-21 94.5 6.5 110 2-112 233-344 (433)
131 KOG2111|consensus 99.7 5.5E-15 1.2E-19 87.1 12.1 98 15-113 154-256 (346)
132 KOG1408|consensus 99.7 3.7E-15 7.9E-20 96.0 11.8 108 4-112 602-712 (1080)
133 KOG1063|consensus 99.7 1.7E-15 3.8E-20 96.5 10.0 110 2-112 529-647 (764)
134 KOG0772|consensus 99.7 2.6E-15 5.6E-20 93.4 10.5 111 2-112 218-346 (641)
135 KOG0268|consensus 99.7 3.9E-16 8.5E-21 93.4 6.5 110 2-113 191-302 (433)
136 KOG0301|consensus 99.7 2.2E-15 4.9E-20 96.0 10.0 96 12-112 153-248 (745)
137 KOG4378|consensus 99.7 1.7E-15 3.6E-20 94.0 9.2 109 4-113 170-280 (673)
138 KOG0290|consensus 99.7 6.7E-15 1.5E-19 86.1 11.2 105 9-113 162-318 (364)
139 KOG0647|consensus 99.7 7.9E-15 1.7E-19 86.0 11.4 107 3-113 77-184 (347)
140 KOG1009|consensus 99.7 6.2E-16 1.3E-20 93.4 7.0 110 1-111 68-193 (434)
141 KOG1188|consensus 99.6 4.5E-15 9.7E-20 88.2 10.0 103 11-113 41-196 (376)
142 KOG1036|consensus 99.6 1.9E-14 4.2E-19 84.4 12.2 99 10-113 65-163 (323)
143 KOG0288|consensus 99.6 1.1E-14 2.4E-19 88.4 11.5 102 9-112 311-416 (459)
144 KOG0649|consensus 99.6 3E-14 6.5E-19 81.8 12.4 108 2-113 118-235 (325)
145 KOG0299|consensus 99.6 6.1E-15 1.3E-19 90.3 10.1 111 2-113 146-274 (479)
146 KOG0300|consensus 99.6 1E-14 2.2E-19 86.6 10.5 108 3-113 319-428 (481)
147 KOG0321|consensus 99.6 3.2E-15 6.9E-20 94.7 8.9 109 5-113 107-248 (720)
148 KOG1007|consensus 99.6 4.3E-15 9.4E-20 86.9 8.8 106 5-111 177-287 (370)
149 KOG1272|consensus 99.6 7.1E-16 1.5E-20 94.7 5.5 108 5-113 216-323 (545)
150 KOG0288|consensus 99.6 1.2E-14 2.5E-19 88.2 10.4 106 4-110 347-458 (459)
151 KOG0301|consensus 99.6 3.1E-14 6.8E-19 90.9 12.7 98 10-112 190-287 (745)
152 KOG1009|consensus 99.6 1E-14 2.2E-19 88.3 9.5 107 6-113 21-153 (434)
153 KOG2394|consensus 99.6 1.3E-14 2.8E-19 90.7 10.0 109 3-112 224-361 (636)
154 KOG1274|consensus 99.6 3.8E-14 8.2E-19 92.7 12.5 110 3-113 59-168 (933)
155 KOG2096|consensus 99.6 7.9E-14 1.7E-18 82.7 12.7 110 1-112 89-257 (420)
156 KOG0771|consensus 99.6 1.6E-14 3.4E-19 87.5 9.6 108 3-112 149-310 (398)
157 KOG1332|consensus 99.6 1.3E-14 2.8E-19 83.1 8.6 101 11-111 176-284 (299)
158 KOG2106|consensus 99.6 5.3E-14 1.1E-18 87.5 11.8 102 5-112 375-476 (626)
159 KOG4328|consensus 99.6 1.3E-14 2.9E-19 88.9 8.9 112 2-113 190-353 (498)
160 KOG1007|consensus 99.6 5.3E-14 1.2E-18 82.4 9.5 111 1-113 126-245 (370)
161 KOG2919|consensus 99.6 5.8E-14 1.3E-18 83.3 9.6 111 2-113 211-327 (406)
162 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 3.7E-13 7.9E-18 80.4 13.3 108 4-113 162-279 (300)
163 KOG0321|consensus 99.6 1.8E-14 3.9E-19 91.4 7.7 103 10-113 64-175 (720)
164 KOG2048|consensus 99.6 3.1E-13 6.6E-18 86.2 13.1 108 4-113 75-184 (691)
165 KOG4227|consensus 99.6 1.1E-13 2.4E-18 84.3 10.6 112 1-113 59-179 (609)
166 KOG1034|consensus 99.6 1E-13 2.2E-18 82.3 10.0 67 4-71 141-211 (385)
167 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 5.6E-13 1.2E-17 79.7 13.0 101 10-113 1-103 (300)
168 KOG4328|consensus 99.6 5.3E-14 1.1E-18 86.3 8.5 108 5-112 286-398 (498)
169 KOG0303|consensus 99.5 8E-14 1.7E-18 84.5 8.9 109 2-112 135-248 (472)
170 KOG0649|consensus 99.5 6.4E-13 1.4E-17 76.5 11.4 70 43-113 117-186 (325)
171 KOG2919|consensus 99.5 4.2E-13 9.1E-18 79.8 10.5 110 3-113 163-281 (406)
172 KOG2055|consensus 99.5 5.6E-13 1.2E-17 82.1 11.2 106 4-112 309-416 (514)
173 KOG1408|consensus 99.5 4.7E-13 1E-17 86.6 11.2 62 51-112 606-670 (1080)
174 KOG0307|consensus 99.5 2.7E-14 6E-19 94.9 4.9 110 4-113 70-192 (1049)
175 KOG1538|consensus 99.5 5.6E-13 1.2E-17 85.8 9.8 107 3-111 17-160 (1081)
176 KOG2445|consensus 99.5 1.6E-12 3.5E-17 76.8 10.5 101 11-112 185-317 (361)
177 PF08662 eIF2A: Eukaryotic tra 99.5 1.5E-11 3.2E-16 70.1 13.8 106 4-113 11-133 (194)
178 KOG0280|consensus 99.5 3.1E-12 6.8E-17 75.1 11.1 110 4-113 127-241 (339)
179 KOG2048|consensus 99.5 2.7E-12 5.8E-17 82.0 11.5 106 4-111 160-273 (691)
180 KOG4378|consensus 99.5 6.5E-13 1.4E-17 82.8 8.0 106 7-113 88-195 (673)
181 KOG1188|consensus 99.5 4E-12 8.6E-17 75.9 11.0 75 38-113 163-242 (376)
182 COG2319 FOG: WD40 repeat [Gene 99.5 1.2E-11 2.6E-16 75.9 13.7 109 3-113 160-271 (466)
183 KOG2110|consensus 99.4 6.5E-12 1.4E-16 75.6 11.6 107 4-112 91-203 (391)
184 KOG3881|consensus 99.4 5.6E-12 1.2E-16 76.3 11.3 103 10-113 216-320 (412)
185 KOG2055|consensus 99.4 3.7E-12 8.1E-17 78.6 10.5 111 1-113 260-374 (514)
186 KOG1523|consensus 99.4 4.3E-12 9.3E-17 75.3 10.4 110 2-112 14-129 (361)
187 KOG0307|consensus 99.4 5E-13 1.1E-17 89.1 7.1 110 3-112 211-326 (1049)
188 KOG1445|consensus 99.4 1E-12 2.3E-17 84.2 8.2 104 9-113 91-200 (1012)
189 KOG1587|consensus 99.4 2.1E-12 4.5E-17 82.8 8.7 107 5-112 405-515 (555)
190 KOG0642|consensus 99.4 4.1E-12 8.8E-17 79.8 9.5 67 3-70 349-425 (577)
191 KOG0290|consensus 99.4 3.6E-12 7.9E-17 74.9 8.6 101 11-113 114-227 (364)
192 KOG2111|consensus 99.4 4.4E-11 9.6E-16 71.0 13.1 71 1-72 184-257 (346)
193 KOG1963|consensus 99.4 1.4E-11 3.1E-16 80.5 12.0 109 2-112 209-321 (792)
194 KOG1524|consensus 99.4 3.8E-12 8.1E-17 80.2 8.6 107 3-112 109-215 (737)
195 KOG0322|consensus 99.4 8.6E-13 1.9E-17 76.6 5.2 67 3-70 256-322 (323)
196 KOG2106|consensus 99.4 4.4E-11 9.5E-16 74.9 12.8 106 3-111 412-519 (626)
197 COG2319 FOG: WD40 repeat [Gene 99.4 9.1E-11 2E-15 72.0 13.9 105 7-112 119-228 (466)
198 KOG1272|consensus 99.4 2.7E-12 5.8E-17 79.4 6.6 104 3-110 256-359 (545)
199 KOG1063|consensus 99.3 3.6E-11 7.7E-16 77.4 10.4 109 3-112 577-698 (764)
200 KOG1523|consensus 99.3 2.5E-11 5.4E-16 72.1 8.9 109 2-111 59-174 (361)
201 KOG1240|consensus 99.3 1.7E-10 3.6E-15 78.5 13.4 107 6-113 1057-1225(1431)
202 KOG0280|consensus 99.3 1.6E-11 3.5E-16 72.2 7.6 100 9-109 177-280 (339)
203 PF00400 WD40: WD domain, G-be 99.3 1.3E-11 2.8E-16 52.6 5.4 39 73-111 1-39 (39)
204 KOG0650|consensus 99.3 1.2E-11 2.6E-16 78.6 7.1 107 3-110 612-732 (733)
205 KOG1517|consensus 99.3 8.7E-11 1.9E-15 79.0 11.1 109 5-113 1172-1287(1387)
206 KOG0974|consensus 99.3 3.5E-11 7.6E-16 80.0 9.2 103 6-112 183-287 (967)
207 KOG2321|consensus 99.3 5.2E-11 1.1E-15 75.6 8.6 111 1-112 178-301 (703)
208 KOG1587|consensus 99.3 9.4E-11 2E-15 75.4 9.5 108 5-113 354-472 (555)
209 PF02239 Cytochrom_D1: Cytochr 99.3 1.3E-09 2.9E-14 67.6 14.2 99 13-113 9-108 (369)
210 KOG0974|consensus 99.3 2.1E-10 4.6E-15 76.5 11.0 104 6-112 141-245 (967)
211 KOG1538|consensus 99.2 3.5E-10 7.6E-15 73.4 11.3 109 2-112 136-292 (1081)
212 KOG1310|consensus 99.2 4.6E-11 1E-15 75.6 7.2 81 32-113 42-125 (758)
213 PF00400 WD40: WD domain, G-be 99.2 1.1E-10 2.3E-15 49.7 6.3 39 30-69 1-39 (39)
214 KOG2139|consensus 99.2 5.5E-10 1.2E-14 67.7 11.2 108 2-112 144-267 (445)
215 PRK01742 tolB translocation pr 99.2 7.3E-10 1.6E-14 70.1 12.3 107 3-112 208-321 (429)
216 KOG2139|consensus 99.2 5.8E-10 1.3E-14 67.6 11.0 101 3-104 200-301 (445)
217 PRK11028 6-phosphogluconolacto 99.2 1.2E-09 2.5E-14 66.9 12.5 107 4-112 85-204 (330)
218 KOG0650|consensus 99.2 4.5E-11 9.8E-16 76.1 5.7 108 2-111 570-678 (733)
219 PRK11028 6-phosphogluconolacto 99.2 2E-09 4.4E-14 65.8 12.6 108 4-112 180-303 (330)
220 KOG2321|consensus 99.2 5.4E-10 1.2E-14 71.1 10.0 101 11-113 147-258 (703)
221 KOG0771|consensus 99.2 1.2E-10 2.5E-15 71.1 6.4 68 44-113 148-215 (398)
222 KOG4547|consensus 99.1 2E-09 4.2E-14 68.3 10.9 99 12-113 72-172 (541)
223 KOG2315|consensus 99.1 4.2E-09 9.1E-14 66.7 12.1 104 3-112 275-389 (566)
224 KOG1517|consensus 99.1 3.6E-09 7.8E-14 71.6 11.0 102 9-112 1220-1332(1387)
225 PRK05137 tolB translocation pr 99.1 1.5E-08 3.4E-13 64.2 13.1 107 3-112 206-321 (435)
226 KOG4497|consensus 99.1 4.7E-10 1E-14 67.4 5.9 108 3-112 13-121 (447)
227 KOG4547|consensus 99.1 6.9E-09 1.5E-13 65.9 10.8 101 7-110 111-217 (541)
228 KOG4227|consensus 99.1 8.5E-09 1.8E-13 63.5 10.7 109 4-113 111-225 (609)
229 KOG1240|consensus 99.1 2.5E-09 5.4E-14 73.1 9.1 87 25-112 1034-1127(1431)
230 KOG1524|consensus 99.0 3.8E-09 8.1E-14 67.1 9.2 106 1-109 148-282 (737)
231 KOG3914|consensus 99.0 1.2E-09 2.7E-14 66.5 6.6 75 3-79 156-231 (390)
232 PF02239 Cytochrom_D1: Cytochr 99.0 1E-07 2.2E-12 59.4 15.1 107 4-112 42-157 (369)
233 KOG4714|consensus 99.0 4.7E-10 1E-14 65.4 4.5 72 41-112 180-253 (319)
234 PF11768 DUF3312: Protein of u 99.0 1.5E-08 3.2E-13 64.7 10.9 71 39-112 258-328 (545)
235 PRK03629 tolB translocation pr 99.0 4.6E-08 1E-12 62.1 13.2 105 3-110 203-314 (429)
236 PRK02889 tolB translocation pr 99.0 2.6E-08 5.7E-13 63.1 12.1 106 3-111 200-312 (427)
237 PRK01742 tolB translocation pr 99.0 1.4E-08 3E-13 64.4 10.3 104 3-112 252-360 (429)
238 KOG4714|consensus 99.0 2.7E-09 5.8E-14 62.3 6.3 107 3-111 184-316 (319)
239 KOG3881|consensus 99.0 1.8E-08 4E-13 61.5 9.8 105 9-113 160-277 (412)
240 PRK04922 tolB translocation pr 99.0 7.3E-08 1.6E-12 61.2 12.9 106 4-112 209-323 (433)
241 PRK03629 tolB translocation pr 98.9 1.3E-07 2.8E-12 60.1 13.4 106 4-112 248-362 (429)
242 TIGR02800 propeller_TolB tol-p 98.9 1.3E-07 2.8E-12 59.6 13.1 106 4-112 195-309 (417)
243 KOG2695|consensus 98.9 1.7E-08 3.7E-13 61.1 7.7 107 6-113 260-376 (425)
244 KOG3621|consensus 98.9 2.3E-08 4.9E-13 65.1 8.8 109 3-112 38-153 (726)
245 KOG3914|consensus 98.9 1.7E-08 3.6E-13 61.7 7.7 77 35-113 146-223 (390)
246 KOG1963|consensus 98.9 1E-07 2.2E-12 63.1 11.7 110 1-112 254-374 (792)
247 PF15492 Nbas_N: Neuroblastoma 98.9 6.3E-07 1.4E-11 53.1 13.7 30 83-112 229-258 (282)
248 KOG1334|consensus 98.9 7.9E-09 1.7E-13 64.8 6.3 111 1-111 339-464 (559)
249 PRK04922 tolB translocation pr 98.9 2.5E-07 5.4E-12 58.8 13.1 107 3-112 252-367 (433)
250 KOG2041|consensus 98.9 2.6E-08 5.7E-13 65.6 8.7 107 2-109 18-141 (1189)
251 KOG1064|consensus 98.9 4E-08 8.7E-13 69.8 9.2 106 7-113 2217-2366(2439)
252 KOG1275|consensus 98.8 6.3E-08 1.4E-12 64.9 9.7 103 6-111 183-340 (1118)
253 PRK04792 tolB translocation pr 98.8 5.9E-07 1.3E-11 57.4 13.5 107 3-112 222-337 (448)
254 PRK00178 tolB translocation pr 98.8 5.3E-07 1.1E-11 57.3 13.0 106 4-112 204-318 (430)
255 PRK02889 tolB translocation pr 98.8 2.2E-07 4.9E-12 59.0 11.1 107 3-112 244-359 (427)
256 PRK05137 tolB translocation pr 98.8 9.5E-07 2.1E-11 56.3 13.9 107 3-112 250-365 (435)
257 KOG0644|consensus 98.8 1.9E-08 4.1E-13 66.9 6.3 101 12-112 367-467 (1113)
258 COG4946 Uncharacterized protei 98.8 1.1E-06 2.3E-11 55.7 13.4 106 5-112 366-476 (668)
259 KOG4532|consensus 98.8 1.1E-06 2.5E-11 51.9 12.5 111 2-113 162-282 (344)
260 TIGR02800 propeller_TolB tol-p 98.8 1.1E-06 2.4E-11 55.4 13.3 107 3-112 238-353 (417)
261 PF11768 DUF3312: Protein of u 98.8 7.8E-08 1.7E-12 61.5 8.1 67 2-71 263-329 (545)
262 PLN02919 haloacid dehalogenase 98.8 1.1E-06 2.4E-11 61.3 13.8 109 4-113 745-888 (1057)
263 KOG1645|consensus 98.7 5.9E-08 1.3E-12 59.8 6.7 91 22-113 175-266 (463)
264 KOG1409|consensus 98.7 7E-08 1.5E-12 58.5 6.8 68 2-70 201-269 (404)
265 KOG1354|consensus 98.7 5.6E-08 1.2E-12 59.0 6.3 108 3-112 169-300 (433)
266 PRK01029 tolB translocation pr 98.7 1.7E-06 3.7E-11 55.1 12.9 107 4-112 286-402 (428)
267 KOG1409|consensus 98.7 3E-07 6.5E-12 55.8 8.3 82 31-113 188-270 (404)
268 PRK01029 tolB translocation pr 98.7 1.9E-06 4.1E-11 54.9 11.9 108 4-112 236-358 (428)
269 KOG3617|consensus 98.7 9.9E-08 2.1E-12 64.0 6.1 108 2-112 19-130 (1416)
270 PRK00178 tolB translocation pr 98.6 6.3E-06 1.4E-10 52.4 13.4 107 3-112 247-362 (430)
271 KOG1334|consensus 98.6 2.6E-07 5.7E-12 58.2 6.8 111 3-113 147-263 (559)
272 TIGR02658 TTQ_MADH_Hv methylam 98.6 1.2E-05 2.6E-10 49.9 13.5 102 9-113 11-136 (352)
273 KOG4532|consensus 98.6 4.2E-06 9.1E-11 49.6 10.7 101 12-113 130-233 (344)
274 KOG2314|consensus 98.6 1.3E-06 2.8E-11 56.2 9.0 106 2-112 214-333 (698)
275 KOG4640|consensus 98.5 9.2E-07 2E-11 57.4 8.0 88 3-92 25-114 (665)
276 PRK04792 tolB translocation pr 98.5 1.5E-05 3.4E-10 51.1 13.0 103 4-109 267-376 (448)
277 KOG4640|consensus 98.5 1.1E-06 2.5E-11 57.0 7.9 72 40-113 20-92 (665)
278 KOG1064|consensus 98.5 4E-07 8.8E-12 65.1 6.2 65 37-112 2333-2397(2439)
279 KOG2066|consensus 98.5 4.4E-06 9.6E-11 55.7 10.5 100 8-112 81-186 (846)
280 KOG1275|consensus 98.5 2.5E-06 5.4E-11 57.7 9.3 100 9-113 146-254 (1118)
281 KOG4190|consensus 98.5 6.8E-07 1.5E-11 57.8 6.6 63 9-74 746-815 (1034)
282 KOG4497|consensus 98.5 1E-05 2.2E-10 49.4 10.6 97 5-103 55-153 (447)
283 smart00320 WD40 WD40 repeats. 98.5 8.7E-07 1.9E-11 36.2 4.7 37 75-111 4-40 (40)
284 COG5170 CDC55 Serine/threonine 98.5 6.7E-07 1.5E-11 54.0 5.7 108 4-113 178-309 (460)
285 PF10282 Lactonase: Lactonase, 98.4 4.3E-05 9.4E-10 47.5 13.5 108 4-112 197-321 (345)
286 PF14783 BBS2_Mid: Ciliary BBS 98.4 2.5E-05 5.4E-10 40.5 13.2 96 5-108 9-109 (111)
287 COG4946 Uncharacterized protei 98.4 1E-05 2.3E-10 51.5 10.0 95 4-100 407-505 (668)
288 TIGR03300 assembly_YfgL outer 98.4 1.1E-05 2.3E-10 50.6 10.2 97 9-110 278-376 (377)
289 smart00320 WD40 WD40 repeats. 98.4 3.3E-06 7.2E-11 34.4 5.7 38 31-69 3-40 (40)
290 TIGR02658 TTQ_MADH_Hv methylam 98.4 6E-05 1.3E-09 46.9 13.0 101 9-112 205-329 (352)
291 KOG4190|consensus 98.4 3.3E-07 7.2E-12 59.1 3.2 77 33-112 728-811 (1034)
292 PLN02919 haloacid dehalogenase 98.3 6.8E-05 1.5E-09 52.8 13.6 107 4-112 688-832 (1057)
293 PF10282 Lactonase: Lactonase, 98.3 0.00016 3.4E-09 45.0 14.3 109 3-112 41-173 (345)
294 PRK04043 tolB translocation pr 98.3 0.00019 4.1E-09 45.9 14.1 106 4-112 193-308 (419)
295 KOG1912|consensus 98.3 1.7E-05 3.7E-10 53.2 9.2 106 5-112 22-142 (1062)
296 KOG1354|consensus 98.3 3.5E-05 7.5E-10 47.3 9.5 111 2-113 29-193 (433)
297 KOG1912|consensus 98.3 2E-05 4.3E-10 52.9 9.1 99 12-110 81-183 (1062)
298 KOG2444|consensus 98.2 9.6E-06 2.1E-10 47.0 6.5 103 10-112 70-176 (238)
299 TIGR03300 assembly_YfgL outer 98.2 0.0001 2.2E-09 46.2 11.5 99 9-112 64-162 (377)
300 PF04762 IKI3: IKI3 family; I 98.2 4.5E-05 9.8E-10 52.9 10.6 105 4-112 215-332 (928)
301 COG2706 3-carboxymuconate cycl 98.2 0.00028 6E-09 43.4 12.5 108 3-112 93-220 (346)
302 PF13360 PQQ_2: PQQ-like domai 98.1 0.00011 2.3E-09 43.0 10.0 102 9-113 35-140 (238)
303 KOG2066|consensus 98.1 2.8E-05 6E-10 52.1 7.9 93 7-110 46-143 (846)
304 KOG0309|consensus 98.1 1.9E-05 4.1E-10 52.9 7.1 109 5-113 74-188 (1081)
305 KOG2695|consensus 98.1 2.1E-05 4.6E-10 48.2 6.6 83 9-92 310-401 (425)
306 KOG2079|consensus 98.1 2E-05 4.4E-10 54.3 7.1 96 10-106 99-198 (1206)
307 KOG0309|consensus 98.1 6.9E-06 1.5E-10 54.8 4.8 102 10-112 127-231 (1081)
308 KOG1832|consensus 98.1 5.7E-06 1.2E-10 56.3 4.1 106 2-112 1105-1213(1516)
309 COG5354 Uncharacterized protei 98.0 4.9E-05 1.1E-09 48.7 7.1 104 3-111 37-158 (561)
310 PRK04043 tolB translocation pr 97.9 0.0016 3.5E-08 41.8 13.4 97 3-104 237-339 (419)
311 KOG4649|consensus 97.9 0.00043 9.3E-09 41.4 9.6 83 10-93 63-145 (354)
312 KOG1645|consensus 97.9 9.6E-05 2.1E-09 46.2 7.2 69 4-73 199-268 (463)
313 KOG2314|consensus 97.9 0.00018 3.9E-09 46.8 8.3 96 2-99 253-362 (698)
314 KOG4649|consensus 97.9 0.0013 2.9E-08 39.4 11.6 101 10-113 23-123 (354)
315 PRK11138 outer membrane biogen 97.9 0.00095 2.1E-08 42.3 11.2 97 11-112 295-393 (394)
316 PF12894 Apc4_WD40: Anaphase-p 97.9 0.00013 2.9E-09 32.0 5.2 30 83-112 11-40 (47)
317 KOG2315|consensus 97.8 0.0011 2.4E-08 43.1 10.7 87 21-112 252-343 (566)
318 PF08553 VID27: VID27 cytoplas 97.8 0.00071 1.5E-08 46.3 10.3 97 12-111 544-645 (794)
319 COG5354 Uncharacterized protei 97.8 0.0011 2.4E-08 42.8 10.2 103 4-112 280-394 (561)
320 PF08450 SGL: SMP-30/Gluconola 97.7 0.0025 5.3E-08 37.8 13.2 97 4-102 139-244 (246)
321 PF12894 Apc4_WD40: Anaphase-p 97.7 0.00034 7.3E-09 30.8 5.4 35 39-75 10-44 (47)
322 KOG2114|consensus 97.7 0.00099 2.2E-08 45.5 9.6 106 3-110 28-152 (933)
323 PF07433 DUF1513: Protein of u 97.7 0.0033 7.3E-08 38.5 11.3 98 4-102 10-117 (305)
324 PF07433 DUF1513: Protein of u 97.7 0.0034 7.3E-08 38.5 12.2 99 5-104 57-183 (305)
325 KOG1920|consensus 97.7 0.00097 2.1E-08 47.1 9.3 107 4-112 201-321 (1265)
326 KOG1832|consensus 97.6 0.00011 2.4E-09 50.5 4.4 81 31-112 1092-1174(1516)
327 PRK02888 nitrous-oxide reducta 97.6 0.005 1.1E-07 41.3 11.6 50 63-113 296-351 (635)
328 PF08450 SGL: SMP-30/Gluconola 97.6 0.0042 9.1E-08 36.8 14.1 103 5-112 46-163 (246)
329 PF04762 IKI3: IKI3 family; I 97.6 0.0047 1E-07 43.5 11.9 106 3-111 261-377 (928)
330 KOG0882|consensus 97.5 0.0028 6.1E-08 40.6 9.1 98 15-113 117-231 (558)
331 KOG2041|consensus 97.5 0.0003 6.5E-09 47.4 5.1 109 2-112 75-185 (1189)
332 COG5170 CDC55 Serine/threonine 97.5 0.0016 3.5E-08 40.0 7.5 109 3-112 31-200 (460)
333 KOG2395|consensus 97.4 0.0028 6.2E-08 41.4 8.6 95 14-111 398-498 (644)
334 COG2706 3-carboxymuconate cycl 97.4 0.0097 2.1E-07 37.0 13.2 109 3-112 44-174 (346)
335 PF13360 PQQ_2: PQQ-like domai 97.4 0.0071 1.5E-07 35.4 14.6 99 9-113 121-230 (238)
336 KOG1008|consensus 97.4 5.8E-05 1.3E-09 49.8 1.2 108 3-112 159-274 (783)
337 KOG1008|consensus 97.4 3E-05 6.4E-10 51.1 -0.2 103 11-113 71-184 (783)
338 PRK11138 outer membrane biogen 97.4 0.011 2.4E-07 37.5 11.2 98 9-112 68-177 (394)
339 KOG0882|consensus 97.4 0.0032 7E-08 40.4 8.5 107 5-112 60-173 (558)
340 KOG3617|consensus 97.4 0.0011 2.4E-08 45.7 6.8 67 4-71 65-131 (1416)
341 PF02897 Peptidase_S9_N: Proly 97.3 0.015 3.3E-07 37.1 13.2 108 3-112 128-259 (414)
342 PRK13616 lipoprotein LpqB; Pro 97.3 0.014 3.1E-07 39.2 11.3 99 3-109 354-472 (591)
343 PRK02888 nitrous-oxide reducta 97.3 0.013 2.7E-07 39.5 10.7 102 6-112 284-403 (635)
344 PF08553 VID27: VID27 cytoplas 97.3 0.015 3.3E-07 40.3 11.3 99 11-111 494-604 (794)
345 PF00930 DPPIV_N: Dipeptidyl p 97.3 0.0032 6.9E-08 39.5 7.6 95 7-104 1-121 (353)
346 PF04053 Coatomer_WDAD: Coatom 97.3 0.015 3.2E-07 37.8 10.5 55 53-111 117-171 (443)
347 COG0823 TolB Periplasmic compo 97.2 0.013 2.7E-07 37.9 9.8 98 3-103 242-345 (425)
348 PF06977 SdiA-regulated: SdiA- 97.2 0.017 3.7E-07 34.6 12.4 105 4-110 123-247 (248)
349 PF03178 CPSF_A: CPSF A subuni 97.2 0.019 4E-07 35.6 10.0 104 5-112 93-201 (321)
350 PF14783 BBS2_Mid: Ciliary BBS 97.2 0.0097 2.1E-07 31.1 9.0 65 43-111 2-69 (111)
351 PF00780 CNH: CNH domain; Int 97.2 0.02 4.3E-07 34.5 11.7 66 5-74 2-67 (275)
352 PF12234 Rav1p_C: RAVE protein 97.1 0.036 7.9E-07 37.5 12.2 101 9-111 40-154 (631)
353 PF07569 Hira: TUP1-like enhan 97.1 0.014 3E-07 34.3 8.8 69 3-73 15-97 (219)
354 PF10313 DUF2415: Uncharacteri 97.1 0.0037 8.1E-08 26.8 4.6 29 85-113 2-33 (43)
355 KOG3621|consensus 97.1 0.0011 2.3E-08 44.4 4.2 69 3-72 81-155 (726)
356 PF15492 Nbas_N: Neuroblastoma 97.0 0.0061 1.3E-07 36.8 6.7 45 40-85 229-273 (282)
357 COG0823 TolB Periplasmic compo 97.0 0.0098 2.1E-07 38.4 8.0 104 4-110 198-309 (425)
358 PF07569 Hira: TUP1-like enhan 97.0 0.028 6E-07 33.1 9.4 68 41-112 13-94 (219)
359 COG3391 Uncharacterized conser 97.0 0.042 9.2E-07 35.0 13.4 106 4-112 79-189 (381)
360 KOG2079|consensus 96.9 0.0085 1.8E-07 42.3 7.4 65 2-69 134-201 (1206)
361 PF10313 DUF2415: Uncharacteri 96.8 0.01 2.3E-07 25.5 5.2 32 42-73 2-35 (43)
362 PF14655 RAB3GAP2_N: Rab3 GTPa 96.8 0.036 7.8E-07 35.7 8.8 78 3-80 312-407 (415)
363 PF06977 SdiA-regulated: SdiA- 96.5 0.074 1.6E-06 32.0 11.8 107 4-112 27-146 (248)
364 KOG3630|consensus 96.5 0.013 2.7E-07 41.9 5.9 96 15-111 119-226 (1405)
365 PF04053 Coatomer_WDAD: Coatom 96.5 0.12 2.6E-06 33.8 10.5 56 10-70 117-172 (443)
366 COG3391 Uncharacterized conser 96.5 0.11 2.4E-06 33.1 13.7 107 4-112 121-238 (381)
367 PF06433 Me-amine-dh_H: Methyl 96.4 0.048 1E-06 34.2 7.5 61 21-82 270-331 (342)
368 KOG2114|consensus 96.2 0.24 5.2E-06 34.8 12.1 108 2-112 129-242 (933)
369 KOG2444|consensus 96.2 0.02 4.3E-07 33.7 4.9 62 10-72 114-178 (238)
370 COG3386 Gluconolactonase [Carb 96.1 0.16 3.4E-06 31.6 11.2 99 3-103 167-275 (307)
371 PF03178 CPSF_A: CPSF A subuni 96.0 0.15 3.2E-06 31.7 8.4 98 10-111 42-155 (321)
372 PF14655 RAB3GAP2_N: Rab3 GTPa 96.0 0.23 4.9E-06 32.3 11.6 90 3-93 6-118 (415)
373 PF12234 Rav1p_C: RAVE protein 95.9 0.32 7E-06 33.3 10.3 76 35-111 24-102 (631)
374 cd00216 PQQ_DH Dehydrogenases 95.9 0.28 6.1E-06 32.4 10.5 70 10-81 61-138 (488)
375 PRK13616 lipoprotein LpqB; Pro 95.9 0.33 7.2E-06 33.0 10.6 105 3-110 401-522 (591)
376 COG5167 VID27 Protein involved 95.8 0.33 7E-06 32.5 10.0 59 53-112 573-631 (776)
377 PF10168 Nup88: Nuclear pore c 95.8 0.32 6.9E-06 33.9 9.7 70 4-73 90-181 (717)
378 PF08596 Lgl_C: Lethal giant l 95.8 0.29 6.3E-06 31.6 12.1 107 4-112 7-172 (395)
379 KOG4499|consensus 95.7 0.21 4.6E-06 30.0 9.2 88 4-92 163-262 (310)
380 PF04841 Vps16_N: Vps16, N-ter 95.7 0.31 6.6E-06 31.6 12.4 65 4-71 34-109 (410)
381 KOG1920|consensus 95.7 0.25 5.4E-06 35.9 8.9 67 41-109 69-135 (1265)
382 PF11715 Nup160: Nucleoporin N 95.6 0.24 5.2E-06 33.1 8.5 70 9-78 157-255 (547)
383 KOG1897|consensus 95.5 0.57 1.2E-05 33.6 10.1 101 6-110 782-895 (1096)
384 PF05096 Glu_cyclase_2: Glutam 95.5 0.3 6.4E-06 29.7 12.2 100 8-112 54-156 (264)
385 KOG1916|consensus 95.4 0.026 5.5E-07 39.7 3.6 92 20-112 153-264 (1283)
386 cd00216 PQQ_DH Dehydrogenases 95.3 0.52 1.1E-05 31.3 11.1 67 11-80 111-192 (488)
387 PF10168 Nup88: Nuclear pore c 95.2 0.68 1.5E-05 32.4 13.6 70 42-112 86-178 (717)
388 PF14583 Pectate_lyase22: Olig 95.2 0.47 1E-05 30.5 9.4 94 4-98 41-139 (386)
389 PF08596 Lgl_C: Lethal giant l 95.1 0.31 6.6E-06 31.5 7.6 92 12-104 228-327 (395)
390 KOG2395|consensus 95.0 0.12 2.7E-06 34.3 5.6 64 5-70 435-499 (644)
391 KOG4460|consensus 95.0 0.46 1E-05 31.9 8.1 72 5-76 110-203 (741)
392 PF05694 SBP56: 56kDa selenium 94.9 0.65 1.4E-05 30.4 10.8 95 18-112 220-341 (461)
393 PF14870 PSII_BNR: Photosynthe 94.8 0.56 1.2E-05 29.2 12.6 98 6-107 152-255 (302)
394 TIGR03075 PQQ_enz_alc_DH PQQ-d 94.6 0.58 1.3E-05 31.4 8.1 61 20-82 441-501 (527)
395 PRK10115 protease 2; Provision 94.4 1.1 2.4E-05 31.2 11.7 105 4-111 132-253 (686)
396 PHA02713 hypothetical protein; 94.0 0.91 2E-05 30.7 8.0 59 52-112 463-532 (557)
397 KOG4499|consensus 93.9 0.81 1.7E-05 27.7 8.2 55 5-59 218-272 (310)
398 COG3490 Uncharacterized protei 93.9 0.91 2E-05 28.3 10.4 98 5-103 120-245 (366)
399 PHA02713 hypothetical protein; 93.9 1.3 2.9E-05 30.0 9.0 24 7-30 349-377 (557)
400 PF11715 Nup160: Nucleoporin N 93.8 0.26 5.5E-06 33.0 5.3 29 9-37 229-257 (547)
401 COG3204 Uncharacterized protei 93.8 0.98 2.1E-05 28.1 11.1 109 3-112 90-209 (316)
402 KOG4441|consensus 93.7 1.1 2.3E-05 30.5 8.0 97 7-105 330-438 (571)
403 PF10647 Gmad1: Lipoprotein Lp 93.7 0.91 2E-05 27.4 11.8 105 3-109 28-140 (253)
404 COG4590 ABC-type uncharacteriz 93.6 1.4 3.1E-05 29.3 8.8 100 10-112 280-385 (733)
405 KOG1916|consensus 93.5 0.049 1.1E-06 38.4 1.6 76 6-83 191-282 (1283)
406 TIGR02276 beta_rpt_yvtn 40-res 93.5 0.26 5.6E-06 20.4 4.6 27 55-81 6-32 (42)
407 PF12657 TFIIIC_delta: Transcr 93.4 0.81 1.8E-05 25.9 8.7 28 84-111 86-119 (173)
408 PF14761 HPS3_N: Hermansky-Pud 93.1 1.1 2.3E-05 26.6 7.2 49 54-103 29-79 (215)
409 PF00780 CNH: CNH domain; Int 93.1 1.2 2.5E-05 26.9 7.6 59 51-112 5-63 (275)
410 PF10214 Rrn6: RNA polymerase 93.0 2.3 5E-05 30.1 8.9 72 40-112 145-231 (765)
411 COG3490 Uncharacterized protei 92.8 1.5 3.2E-05 27.4 10.2 80 23-103 94-181 (366)
412 PF07676 PD40: WD40-like Beta 92.5 0.37 8.1E-06 19.7 5.1 27 84-110 9-38 (39)
413 smart00564 PQQ beta-propeller 92.3 0.35 7.6E-06 18.9 3.9 25 11-35 7-31 (33)
414 PF14781 BBS2_N: Ciliary BBSom 92.0 1.2 2.6E-05 24.4 11.8 86 3-91 3-100 (136)
415 KOG3630|consensus 92.0 0.79 1.7E-05 33.6 5.7 86 13-100 171-260 (1405)
416 PHA03098 kelch-like protein; P 91.8 2.7 5.9E-05 28.2 8.9 100 8-112 388-510 (534)
417 TIGR03074 PQQ_membr_DH membran 91.8 3.5 7.6E-05 29.3 12.3 71 10-80 194-287 (764)
418 PF03088 Str_synth: Strictosid 91.7 0.86 1.9E-05 23.0 4.3 41 60-101 34-74 (89)
419 PF14269 Arylsulfotran_2: Aryl 91.3 2.4 5.2E-05 26.4 7.1 68 43-111 146-218 (299)
420 KOG4441|consensus 91.2 3.2 6.9E-05 28.4 7.8 92 10-106 285-392 (571)
421 KOG2247|consensus 91.1 0.065 1.4E-06 35.3 0.0 91 7-98 83-174 (615)
422 PF15390 DUF4613: Domain of un 90.7 4 8.7E-05 28.1 10.2 97 12-111 75-184 (671)
423 TIGR03075 PQQ_enz_alc_DH PQQ-d 90.2 4.3 9.3E-05 27.5 11.4 68 10-80 69-147 (527)
424 PF01011 PQQ: PQQ enzyme repea 90.0 0.79 1.7E-05 18.8 4.2 26 13-38 3-28 (38)
425 PF02897 Peptidase_S9_N: Proly 89.8 3.9 8.4E-05 26.4 9.0 59 43-103 126-189 (414)
426 PF04841 Vps16_N: Vps16, N-ter 89.7 4.1 8.9E-05 26.6 12.9 54 41-95 217-271 (410)
427 PF14727 PHTB1_N: PTHB1 N-term 89.6 4.3 9.3E-05 26.7 12.9 102 10-112 37-162 (418)
428 KOG4460|consensus 89.3 5.3 0.00011 27.3 10.9 70 42-112 105-197 (741)
429 PF14870 PSII_BNR: Photosynthe 89.2 3.9 8.4E-05 25.7 13.2 71 39-111 143-213 (302)
430 KOG3616|consensus 89.1 1.1 2.4E-05 31.7 4.4 62 4-69 20-81 (1636)
431 PF05096 Glu_cyclase_2: Glutam 89.1 3.7 8E-05 25.2 11.4 94 8-103 137-250 (264)
432 PHA03098 kelch-like protein; P 88.7 5.6 0.00012 26.8 9.4 62 9-74 294-369 (534)
433 PF01436 NHL: NHL repeat; Int 88.6 0.86 1.9E-05 17.4 3.8 25 86-110 4-28 (28)
434 COG5167 VID27 Protein involved 88.1 3.1 6.6E-05 28.3 5.7 59 10-70 573-631 (776)
435 PF12341 DUF3639: Protein of u 88.0 0.99 2.2E-05 17.3 2.8 24 3-26 4-27 (27)
436 COG3386 Gluconolactonase [Carb 87.8 5 0.00011 25.2 11.0 106 5-112 117-242 (307)
437 KOG1900|consensus 87.1 11 0.00024 28.5 8.9 87 17-104 96-199 (1311)
438 TIGR03074 PQQ_membr_DH membran 86.9 9.3 0.0002 27.4 8.7 79 20-99 641-740 (764)
439 PF14761 HPS3_N: Hermansky-Pud 86.3 5.2 0.00011 23.8 10.5 50 11-62 29-80 (215)
440 PF06433 Me-amine-dh_H: Methyl 85.9 7 0.00015 25.0 12.2 104 4-111 41-163 (342)
441 PF12768 Rax2: Cortical protei 85.5 5.5 0.00012 24.7 5.6 50 63-112 16-71 (281)
442 PHA02790 Kelch-like protein; P 85.5 8.7 0.00019 25.7 9.6 97 7-112 360-469 (480)
443 PF08728 CRT10: CRT10; InterP 85.4 11 0.00024 26.8 11.1 102 10-112 114-245 (717)
444 COG3823 Glutamine cyclotransfe 85.2 6.1 0.00013 23.7 8.8 97 10-110 56-155 (262)
445 PF07995 GSDH: Glucose / Sorbo 83.9 8.6 0.00019 24.3 10.7 45 4-50 7-58 (331)
446 smart00036 CNH Domain found in 83.6 8.5 0.00018 24.0 11.5 59 11-72 14-74 (302)
447 COG3204 Uncharacterized protei 83.6 8.7 0.00019 24.2 6.9 74 37-111 82-156 (316)
448 PF00930 DPPIV_N: Dipeptidyl p 82.9 9.8 0.00021 24.2 10.8 95 8-103 245-347 (353)
449 TIGR02604 Piru_Ver_Nterm putat 82.8 10 0.00022 24.4 10.3 96 4-102 19-142 (367)
450 KOG3616|consensus 82.7 8.4 0.00018 27.8 6.0 33 40-73 14-46 (1636)
451 PF11635 Med16: Mediator compl 82.6 15 0.00033 26.3 8.0 67 41-108 260-345 (753)
452 KOG2247|consensus 82.3 0.1 2.2E-06 34.4 -2.7 101 6-111 42-145 (615)
453 PF12768 Rax2: Cortical protei 82.2 9.7 0.00021 23.7 10.2 72 19-92 15-97 (281)
454 PF08728 CRT10: CRT10; InterP 81.7 16 0.00036 26.0 11.9 59 53-112 114-194 (717)
455 PF13570 PQQ_3: PQQ-like domai 81.6 2.9 6.2E-05 17.2 4.7 20 53-72 21-40 (40)
456 TIGR03054 photo_alph_chp1 puta 81.5 6.8 0.00015 21.5 5.7 64 12-76 43-118 (135)
457 COG5308 NUP170 Nuclear pore co 81.4 8.3 0.00018 28.3 5.7 92 17-112 99-208 (1263)
458 TIGR02171 Fb_sc_TIGR02171 Fibr 81.2 19 0.00041 26.4 9.3 80 19-100 328-415 (912)
459 PHA02790 Kelch-like protein; P 80.8 14 0.00031 24.7 9.3 62 9-73 271-341 (480)
460 COG1520 FOG: WD40-like repeat 80.1 13 0.00028 23.8 9.8 70 12-83 70-141 (370)
461 PF07995 GSDH: Glucose / Sorbo 79.3 11 0.00024 23.9 5.5 55 54-108 272-330 (331)
462 KOG2280|consensus 79.3 18 0.0004 25.9 6.6 81 21-104 65-148 (829)
463 COG5276 Uncharacterized conser 79.1 14 0.0003 23.5 12.3 99 9-112 95-198 (370)
464 KOG1898|consensus 78.5 26 0.00056 26.3 8.3 31 46-78 939-969 (1205)
465 TIGR02604 Piru_Ver_Nterm putat 78.4 15 0.00033 23.6 10.5 60 42-103 125-203 (367)
466 PF07250 Glyoxal_oxid_N: Glyox 78.0 12 0.00027 22.7 5.1 80 23-105 49-139 (243)
467 PF10647 Gmad1: Lipoprotein Lp 77.7 13 0.00029 22.5 12.0 100 4-104 71-186 (253)
468 TIGR02171 Fb_sc_TIGR02171 Fibr 76.6 19 0.0004 26.5 6.2 50 63-112 329-384 (912)
469 KOG1983|consensus 76.1 30 0.00065 25.9 7.5 26 3-28 40-65 (993)
470 TIGR03118 PEPCTERM_chp_1 conse 75.8 18 0.00039 23.1 7.7 69 42-111 24-116 (336)
471 PF14269 Arylsulfotran_2: Aryl 72.8 21 0.00045 22.5 6.9 35 5-39 150-184 (299)
472 PF13449 Phytase-like: Esteras 72.5 22 0.00047 22.5 11.1 58 44-103 88-166 (326)
473 KOG2377|consensus 70.3 32 0.00068 23.5 8.6 96 4-102 72-172 (657)
474 KOG1900|consensus 70.2 48 0.001 25.6 8.1 70 39-112 177-271 (1311)
475 PF01731 Arylesterase: Arylest 69.9 12 0.00027 18.7 5.9 49 20-71 36-84 (86)
476 PF08801 Nucleoporin_N: Nup133 69.0 30 0.00064 22.7 7.5 29 84-112 190-218 (422)
477 PF05694 SBP56: 56kDa selenium 68.3 34 0.00073 23.1 6.1 61 41-102 312-392 (461)
478 PF10584 Proteasome_A_N: Prote 67.4 1.3 2.8E-05 16.3 -0.4 8 90-97 7-14 (23)
479 PF14781 BBS2_N: Ciliary BBSom 66.4 20 0.00043 19.8 8.5 60 51-112 8-80 (136)
480 PF14779 BBS1: Ciliary BBSome 66.4 28 0.00061 21.5 7.3 71 40-110 176-255 (257)
481 PF13964 Kelch_6: Kelch motif 64.3 11 0.00024 16.1 2.8 25 5-29 7-37 (50)
482 KOG2467|consensus 64.3 7.3 0.00016 25.4 2.2 20 94-113 340-359 (477)
483 KOG2377|consensus 64.2 44 0.00095 22.9 10.3 57 39-96 65-125 (657)
484 PF06739 SBBP: Beta-propeller 63.1 11 0.00023 15.5 3.3 21 85-105 14-34 (38)
485 KOG1897|consensus 63.1 63 0.0014 24.3 9.8 61 9-72 839-899 (1096)
486 TIGR02608 delta_60_rpt delta-6 62.4 14 0.00031 16.8 4.3 15 87-101 4-18 (55)
487 PRK13684 Ycf48-like protein; P 61.6 39 0.00086 21.5 11.2 97 6-107 180-282 (334)
488 KOG1983|consensus 61.5 40 0.00086 25.3 5.5 21 92-112 243-263 (993)
489 PRK10115 protease 2; Provision 60.7 59 0.0013 23.2 7.8 59 42-103 128-191 (686)
490 KOG1520|consensus 56.5 16 0.00035 23.8 2.7 43 59-102 195-237 (376)
491 cd01211 GAPCenA GAPCenA Phosph 56.3 32 0.00068 18.7 3.6 21 60-80 48-68 (125)
492 PF14779 BBS1: Ciliary BBSome 56.1 47 0.001 20.6 7.1 56 11-67 196-254 (257)
493 PF01344 Kelch_1: Kelch motif; 54.8 17 0.00037 15.1 3.1 16 5-20 7-22 (47)
494 PF12904 Collagen_bind_2: Puta 54.1 29 0.00064 17.7 7.0 48 11-60 17-66 (93)
495 PF15390 DUF4613: Domain of un 54.0 77 0.0017 22.5 7.4 67 4-72 118-187 (671)
496 KOG1896|consensus 51.2 1.2E+02 0.0025 23.7 8.8 90 20-111 1116-1211(1366)
497 TIGR03118 PEPCTERM_chp_1 conse 51.1 65 0.0014 20.8 8.0 75 18-93 220-307 (336)
498 KOG3611|consensus 50.8 96 0.0021 22.6 6.8 56 11-67 426-489 (737)
499 COG4880 Secreted protein conta 50.6 78 0.0017 21.6 8.6 81 31-112 416-502 (603)
500 COG4257 Vgb Streptogramin lyas 50.4 65 0.0014 20.6 8.7 97 5-103 68-167 (353)
No 1
>KOG0263|consensus
Probab=99.96 E-value=9.7e-29 Score=156.33 Aligned_cols=112 Identities=29% Similarity=0.587 Sum_probs=108.4
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
+.|+.|+|+..++++|+.|.+|++||..+|..++.|.+|.++|.+++++ |+|.++++|+.||.|.+||+.+++.+..+.
T Consensus 538 V~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~S-p~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~ 616 (707)
T KOG0263|consen 538 VDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFS-PCGRYLASGDEDGLIKIWDLANGSLVKQLK 616 (707)
T ss_pred cceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEc-CCCceEeecccCCcEEEEEcCCCcchhhhh
Confidence 4689999999999999999999999999999999999999999999999 799999999999999999999999999999
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|++.+.++.|+.+|..|++++.|.+|++||+.
T Consensus 617 ~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 617 GHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT 649 (707)
T ss_pred cccCceeEEEEecCCCEEEecCCCCeEEEEEch
Confidence 999999999999999999999999999999973
No 2
>KOG0272|consensus
Probab=99.96 E-value=7.3e-29 Score=148.60 Aligned_cols=111 Identities=29% Similarity=0.527 Sum_probs=107.3
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.-++|+|+|+++++++.|.+-++||+.++..+...++|...|.+++|. ++|.++++|+.|..-++||++++.++..+.+
T Consensus 265 s~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~-~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g 343 (459)
T KOG0272|consen 265 SRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQ-PDGSLAATGGLDSLGRVWDLRTGRCIMFLAG 343 (459)
T ss_pred eeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEec-CCCceeeccCccchhheeecccCcEEEEecc
Confidence 357899999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|..+|.+++|+|+|..+++|+.|++++|||+|
T Consensus 344 H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR 375 (459)
T KOG0272|consen 344 HIKEILSVAFSPNGYHLATGSSDNTCKVWDLR 375 (459)
T ss_pred cccceeeEeECCCceEEeecCCCCcEEEeeec
Confidence 99999999999999999999999999999986
No 3
>KOG0271|consensus
Probab=99.95 E-value=9e-27 Score=138.84 Aligned_cols=110 Identities=33% Similarity=0.572 Sum_probs=102.5
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc-ceeecc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC-IQTYRG 81 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~-~~~~~~ 81 (113)
+++|+|++..+++|+.|.++|+||..+..+.++.++|...|.+++|+ |++..+++|+.||.|++||.++++. ...+.+
T Consensus 120 ~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvaws-PDgk~iASG~~dg~I~lwdpktg~~~g~~l~g 198 (480)
T KOG0271|consen 120 SVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWS-PDGKKIASGSKDGSIRLWDPKTGQQIGRALRG 198 (480)
T ss_pred EEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEEC-CCcchhhccccCCeEEEecCCCCCcccccccC
Confidence 56799999999999999999999999999999999999999999999 8999999999999999999998865 478899
Q ss_pred cccceEEEEEcc-----CCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSP-----DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~-----~~~~~~~~~~~~~i~~~~~~ 113 (113)
|...|.+++|.| ..+.+++++.||.++|||+.
T Consensus 199 H~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~ 235 (480)
T KOG0271|consen 199 HKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTK 235 (480)
T ss_pred cccceeEEeecccccCCCccceecccCCCCEEEEEcc
Confidence 999999999976 66789999999999999973
No 4
>KOG0266|consensus
Probab=99.94 E-value=7.7e-26 Score=142.00 Aligned_cols=111 Identities=34% Similarity=0.662 Sum_probs=104.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeC-CCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDI-KSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
..++|+|+++++++++.|+++++||+ ..+..++++++|...|++++|+ +.++.+++|+.|++|++||+++++++..+.
T Consensus 207 ~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~-p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~ 285 (456)
T KOG0266|consen 207 SDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFS-PDGNLLVSGSDDGTVRIWDVRTGECVRKLK 285 (456)
T ss_pred eeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEec-CCCCEEEEecCCCcEEEEeccCCeEEEeee
Confidence 45789999999999999999999999 5558899999999999999999 667999999999999999999999999999
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|.+.|..++|+++++++++++.|+.+++||+.
T Consensus 286 ~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~ 318 (456)
T KOG0266|consen 286 GHSDGISGLAFSPDGNLLVSASYDGTIRVWDLE 318 (456)
T ss_pred ccCCceEEEEECCCCCEEEEcCCCccEEEEECC
Confidence 999999999999999999999999999999974
No 5
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=3.2e-25 Score=139.74 Aligned_cols=111 Identities=22% Similarity=0.385 Sum_probs=100.2
Q ss_pred cceEcC-CCCEEEeeecCCeEEEeeCCCC-------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc
Q psy3639 3 VPRVTS-SPQRCLTGSYDRTCKLWDIKSG-------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE 74 (113)
Q Consensus 3 ~~~~~~-~~~~~~~~~~d~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~ 74 (113)
.++|+| +++++++++.|++|++||+.++ +++..+.+|...|.+++|+|..+..+++++.|+.|++||+.+++
T Consensus 80 ~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~ 159 (493)
T PTZ00421 80 DVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK 159 (493)
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe
Confidence 467888 7889999999999999998764 35678889999999999996556799999999999999999998
Q ss_pred cceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 75 CIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 75 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+..+..|...|.+++|+|+|+.+++++.|+.|++||++
T Consensus 160 ~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~r 198 (493)
T PTZ00421 160 AVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPR 198 (493)
T ss_pred EEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECC
Confidence 888888899999999999999999999999999999975
No 6
>KOG0286|consensus
Probab=99.94 E-value=1.5e-25 Score=129.64 Aligned_cols=111 Identities=33% Similarity=0.664 Sum_probs=104.3
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.++.|.. +.++++++.|.+..+||+++++.+..+.+|.+-|.+++++|.+++.+++|+-|+..++||++.+.+.+++.+
T Consensus 149 ScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~g 227 (343)
T KOG0286|consen 149 SCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEG 227 (343)
T ss_pred EEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecc
Confidence 4556666 667889999999999999999999999999999999999976999999999999999999999999999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|++.|++++|.|+|.-|++|++|++.++||+|
T Consensus 228 hesDINsv~ffP~G~afatGSDD~tcRlyDlR 259 (343)
T KOG0286|consen 228 HESDINSVRFFPSGDAFATGSDDATCRLYDLR 259 (343)
T ss_pred cccccceEEEccCCCeeeecCCCceeEEEeec
Confidence 99999999999999999999999999999986
No 7
>KOG0272|consensus
Probab=99.94 E-value=7.9e-26 Score=135.73 Aligned_cols=110 Identities=31% Similarity=0.469 Sum_probs=105.0
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
..++|.++|.++++|+.|..-+|||+++++++-.+.+|..+|..++|+ |+|..+++|+.|+++++||++....+.++.+
T Consensus 307 ~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fs-PNGy~lATgs~Dnt~kVWDLR~r~~ly~ipA 385 (459)
T KOG0272|consen 307 FSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFS-PNGYHLATGSSDNTCKVWDLRMRSELYTIPA 385 (459)
T ss_pred ceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeEC-CCceEEeecCCCCcEEEeeecccccceeccc
Confidence 357899999999999999999999999999999999999999999999 8999999999999999999999988999999
Q ss_pred cccceEEEEEcc-CCCEEEEeecCCcEEEeec
Q psy3639 82 HSAEVVGVTFSP-DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 82 ~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~ 112 (113)
|..-|..+.|+| .|.+|++++.|+++++|..
T Consensus 386 H~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~ 417 (459)
T KOG0272|consen 386 HSNLVSQVKYSPQEGYFLVTASYDNTVKIWST 417 (459)
T ss_pred ccchhhheEecccCCeEEEEcccCcceeeecC
Confidence 999999999999 8889999999999999975
No 8
>KOG0263|consensus
Probab=99.94 E-value=6e-26 Score=143.85 Aligned_cols=110 Identities=25% Similarity=0.460 Sum_probs=105.8
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
.+.|+|.|-++++++.|++.++|......+++.+.+|.+-+.|++|+ |+..++++|+.|.+|++||+.++..++.+.+|
T Consensus 498 dV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FH-PNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH 576 (707)
T KOG0263|consen 498 DVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFH-PNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH 576 (707)
T ss_pred eEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEEC-CcccccccCCCCceEEEEEcCCCcEEEEecCC
Confidence 36789999999999999999999999999999999999999999999 88999999999999999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.++|.+++|||+|++|++|+.|+.|++||+.
T Consensus 577 ~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~ 607 (707)
T KOG0263|consen 577 KGPVTALAFSPCGRYLASGDEDGLIKIWDLA 607 (707)
T ss_pred CCceEEEEEcCCCceEeecccCCcEEEEEcC
Confidence 9999999999999999999999999999973
No 9
>KOG0291|consensus
Probab=99.93 E-value=3.7e-25 Score=140.65 Aligned_cols=111 Identities=32% Similarity=0.530 Sum_probs=100.9
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-------
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE------- 73 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~------- 73 (113)
|++.+++|+|+++++|++||+|++||...+-+..++..|+..|+.+.|+ ..++.+++.+.||+|+.||+...
T Consensus 353 i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~-~~g~~llssSLDGtVRAwDlkRYrNfRTft 431 (893)
T KOG0291|consen 353 ITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFT-ARGNVLLSSSLDGTVRAWDLKRYRNFRTFT 431 (893)
T ss_pred eeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEE-ecCCEEEEeecCCeEEeeeecccceeeeec
Confidence 4678899999999999999999999999999999999999999999999 88999999999999999995433
Q ss_pred -------------------------------------ccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 74 -------------------------------------ECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 74 -------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+.+-.+.+|+++|.+++|+|.+..|++++.|.+|++||+
T Consensus 432 ~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~i 507 (893)
T KOG0291|consen 432 SPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDI 507 (893)
T ss_pred CCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEe
Confidence 334445789999999999999999999999999999986
No 10
>KOG0284|consensus
Probab=99.93 E-value=2.3e-25 Score=133.43 Aligned_cols=112 Identities=29% Similarity=0.494 Sum_probs=106.0
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
+...+|+|++..|+++++|++|+|||....+....+.+|...|.+++|+ |...++++++.|+.|++||.+++.++.++.
T Consensus 183 IRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWH-P~kgLiasgskDnlVKlWDprSg~cl~tlh 261 (464)
T KOG0284|consen 183 IRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWH-PTKGLIASGSKDNLVKLWDPRSGSCLATLH 261 (464)
T ss_pred hheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccC-CccceeEEccCCceeEeecCCCcchhhhhh
Confidence 3567899999999999999999999999888888889999999999999 777899999999999999999999999999
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.|+..|..+.|+|++++|++++.|..++++|+|
T Consensus 262 ~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR 294 (464)
T KOG0284|consen 262 GHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR 294 (464)
T ss_pred hccceEEEEEEcCCCCeeEEccCCceEEEEehh
Confidence 999999999999999999999999999999985
No 11
>KOG0271|consensus
Probab=99.93 E-value=3e-25 Score=132.39 Aligned_cols=109 Identities=31% Similarity=0.561 Sum_probs=105.0
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
+-+.|+|+++++++++.|..|++|+.++|+-+.++++|-.+|..++|+ .+.+++++++.|.++++||+++.+....+.+
T Consensus 371 n~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvaws-aDsRLlVS~SkDsTLKvw~V~tkKl~~DLpG 449 (480)
T KOG0271|consen 371 NHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWS-ADSRLLVSGSKDSTLKVWDVRTKKLKQDLPG 449 (480)
T ss_pred eeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEec-cCccEEEEcCCCceEEEEEeeeeeecccCCC
Confidence 456899999999999999999999999999999999999999999999 8899999999999999999999999999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
|...|+++.|+|||..+++++.|..+++|.
T Consensus 450 h~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 450 HADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred CCceEEEEEecCCCceeecCCCceEEEeec
Confidence 999999999999999999999999999995
No 12
>KOG0319|consensus
Probab=99.92 E-value=2.6e-24 Score=136.21 Aligned_cols=112 Identities=27% Similarity=0.498 Sum_probs=108.2
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
+++++++|+++++++|+.|++.++|+++......++.+|+..+.++.|+ ++.+.+++++.|++|++|.+.+..++.++.
T Consensus 466 IN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs-~~dq~laT~SgD~TvKIW~is~fSClkT~e 544 (775)
T KOG0319|consen 466 INCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFS-KNDQLLATCSGDKTVKIWSISTFSCLKTFE 544 (775)
T ss_pred ccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEec-cccceeEeccCCceEEEEEeccceeeeeec
Confidence 5789999999999999999999999999999999999999999999999 888999999999999999999999999999
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|...|...+|-.+|..|++++.||.+++|+++
T Consensus 545 GH~~aVlra~F~~~~~qliS~~adGliKlWnik 577 (775)
T KOG0319|consen 545 GHTSAVLRASFIRNGKQLISAGADGLIKLWNIK 577 (775)
T ss_pred CccceeEeeeeeeCCcEEEeccCCCcEEEEecc
Confidence 999999999999999999999999999999974
No 13
>KOG0266|consensus
Probab=99.92 E-value=1.6e-23 Score=131.68 Aligned_cols=111 Identities=26% Similarity=0.575 Sum_probs=101.8
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc--cceee
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE--CIQTY 79 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~--~~~~~ 79 (113)
.+++|+|+++++++|+.|++|++||++++++...+.+|...|++++|+ +++..+++++.|+.+++||+.++. ++..+
T Consensus 250 ~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~-~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~ 328 (456)
T KOG0266|consen 250 TSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFS-PDGNLLVSASYDGTIRVWDLETGSKLCLKLL 328 (456)
T ss_pred EEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEEC-CCCCEEEEcCCCccEEEEECCCCceeeeecc
Confidence 467899999999999999999999999999999999999999999999 889999999999999999999998 45666
Q ss_pred ccccc--ceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSA--EVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~--~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..+.. ++..++|+|++.++++++.|+.+++||++
T Consensus 329 ~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~ 364 (456)
T KOG0266|consen 329 SGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR 364 (456)
T ss_pred cCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc
Confidence 65544 48999999999999999999999999974
No 14
>KOG0279|consensus
Probab=99.92 E-value=1.4e-23 Score=120.74 Aligned_cols=109 Identities=32% Similarity=0.485 Sum_probs=96.8
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc-
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH- 82 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~- 82 (113)
+..++++++.++++.|+++++||+.+++..+.|.+|..-|.+++++ ++...+++|+.|.++++|+.............
T Consensus 69 v~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s-~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~ 147 (315)
T KOG0279|consen 69 VVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFS-TDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSH 147 (315)
T ss_pred eEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEec-CCCceeecCCCcceeeeeeecccEEEEEecCCC
Confidence 5678999999999999999999999999999999999999999999 88999999999999999998766544333332
Q ss_pred ccceEEEEEccC--CCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPD--QSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~--~~~~~~~~~~~~i~~~~~~ 113 (113)
...|.++.|+|+ ..++++++.|+++++||++
T Consensus 148 ~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~ 180 (315)
T KOG0279|consen 148 REWVSCVRFSPNESNPIIVSASWDKTVKVWNLR 180 (315)
T ss_pred cCcEEEEEEcCCCCCcEEEEccCCceEEEEccC
Confidence 678999999997 6789999999999999985
No 15
>KOG0273|consensus
Probab=99.92 E-value=7.3e-24 Score=128.90 Aligned_cols=113 Identities=25% Similarity=0.406 Sum_probs=103.7
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCC--------CCCEEEEEeCCCcEEEEeCCc
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEP--------YGDKILTGSFDKTLKLWASAK 72 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~~~~~~~~~~v~~wd~~~ 72 (113)
+++..|+|.+.+|+++++|++++||+.........+..|...|..+.|+|. .+..+++++.|++|++||+..
T Consensus 362 V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~ 441 (524)
T KOG0273|consen 362 VNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVES 441 (524)
T ss_pred eEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccC
Confidence 356789999999999999999999999888888999999999999999962 235789999999999999999
Q ss_pred cccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 73 EECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 73 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.++.++..|..+|++++|+|+|+++++|+.||.|++|+++
T Consensus 442 gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~ 482 (524)
T KOG0273|consen 442 GVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK 482 (524)
T ss_pred CceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc
Confidence 99999998899999999999999999999999999999864
No 16
>KOG0316|consensus
Probab=99.91 E-value=1.7e-23 Score=118.53 Aligned_cols=111 Identities=31% Similarity=0.482 Sum_probs=106.1
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.++.++-+|++.++++.|++|++||...+.+++++.+|...|.+++.+ .++..+++++.|..+.+||+.+++.++.+.+
T Consensus 21 ~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s-~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rg 99 (307)
T KOG0316|consen 21 RAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALS-SDNSKFASCGGDKAVQVWDVNTGKVDRRFRG 99 (307)
T ss_pred EEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeecccc-ccccccccCCCCceEEEEEcccCeeeeeccc
Confidence 456789999999999999999999999999999999999999999999 8889999999999999999999999999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|...|+.++|+.+...+++++.|.++++||-|
T Consensus 100 H~aqVNtV~fNeesSVv~SgsfD~s~r~wDCR 131 (307)
T KOG0316|consen 100 HLAQVNTVRFNEESSVVASGSFDSSVRLWDCR 131 (307)
T ss_pred ccceeeEEEecCcceEEEeccccceeEEEEcc
Confidence 99999999999999999999999999999964
No 17
>KOG0285|consensus
Probab=99.91 E-value=1.4e-23 Score=124.58 Aligned_cols=111 Identities=28% Similarity=0.432 Sum_probs=106.5
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.++++.|..+.|++|+.|++++|||+.+++...++.+|...|..++++ +...++.+++.|+.|+.||+...+.++.+.+
T Consensus 155 r~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS-~rHpYlFs~gedk~VKCwDLe~nkvIR~YhG 233 (460)
T KOG0285|consen 155 RSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVS-KRHPYLFSAGEDKQVKCWDLEYNKVIRHYHG 233 (460)
T ss_pred EEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeec-ccCceEEEecCCCeeEEEechhhhhHHHhcc
Confidence 567899999999999999999999999999999999999999999999 7788999999999999999999999999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|-+.|++++.+|.-+.+++++.|.++++||+|
T Consensus 234 HlS~V~~L~lhPTldvl~t~grDst~RvWDiR 265 (460)
T KOG0285|consen 234 HLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR 265 (460)
T ss_pred ccceeEEEeccccceeEEecCCcceEEEeeec
Confidence 99999999999999999999999999999986
No 18
>PTZ00420 coronin; Provisional
Probab=99.91 E-value=1.5e-22 Score=129.00 Aligned_cols=110 Identities=13% Similarity=0.286 Sum_probs=93.1
Q ss_pred cceEcCC-CCEEEeeecCCeEEEeeCCCCe--------eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 3 VPRVTSS-PQRCLTGSYDRTCKLWDIKSGH--------EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 3 ~~~~~~~-~~~~~~~~~d~~v~i~~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
.++|+|+ ++++++|+.|+.|++|++.++. ++..+.+|...|.+++|+|.....+++++.|+.|++||++++
T Consensus 79 ~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg 158 (568)
T PTZ00420 79 DLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENE 158 (568)
T ss_pred EEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCC
Confidence 4678886 7899999999999999997542 344678899999999999544445679999999999999998
Q ss_pred ccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 74 ECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 74 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.+..+. +...+.+++|+|+|+.+++++.|+.+++||++
T Consensus 159 ~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~R 197 (568)
T PTZ00420 159 KRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR 197 (568)
T ss_pred cEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECC
Confidence 8776665 55789999999999999999999999999975
No 19
>KOG0295|consensus
Probab=99.91 E-value=3.7e-23 Score=122.56 Aligned_cols=112 Identities=29% Similarity=0.474 Sum_probs=103.4
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcC--------------CCCCEEEEEeCCCcEEE
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSE--------------PYGDKILTGSFDKTLKL 67 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~--------------~~~~~~~~~~~~~~v~~ 67 (113)
.+++++.+|.++++++.|.++++|-..++++...+..|..++.+++|.| ..++.+.+++.|++|++
T Consensus 239 r~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~ 318 (406)
T KOG0295|consen 239 RMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKI 318 (406)
T ss_pred EEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEE
Confidence 3567788999999999999999999999988899999999999999986 12358899999999999
Q ss_pred EeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 68 WASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 68 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
||+.++.++.++.+|...|..++|+|.|++++++.+|+++++||++
T Consensus 319 wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~ 364 (406)
T KOG0295|consen 319 WDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK 364 (406)
T ss_pred EeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec
Confidence 9999999999999999999999999999999999999999999974
No 20
>KOG0279|consensus
Probab=99.91 E-value=1e-22 Score=117.30 Aligned_cols=110 Identities=31% Similarity=0.405 Sum_probs=97.8
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCC--CCeEEEEEEcCCC-CCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGH--QNVVYAVAFSEPY-GDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~--~~~v~~~~~~~~~-~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
.++++++...+++|+.|.++++||+. +.+..++..+ .+.|.++.|+|.. ...+++++.|+++++||+++.+....+
T Consensus 110 sva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~ 188 (315)
T KOG0279|consen 110 SVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTF 188 (315)
T ss_pred EEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcc
Confidence 46789999999999999999999987 4444444433 7889999999554 678999999999999999999999999
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+|.+.++.+.+||||...++|+.||.+.+||++
T Consensus 189 ~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~ 222 (315)
T KOG0279|consen 189 IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN 222 (315)
T ss_pred ccccccEEEEEECCCCCEEecCCCCceEEEEEcc
Confidence 9999999999999999999999999999999985
No 21
>KOG0275|consensus
Probab=99.89 E-value=1.1e-23 Score=124.33 Aligned_cols=110 Identities=27% Similarity=0.496 Sum_probs=104.6
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee-CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR-GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
|.+|+.+.+++++|+.||.|++|.+.+|.+++.++ .|...|+++.|+ .++..+.+++.|.++++.-+++++++..+++
T Consensus 268 ci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FS-rD~SqiLS~sfD~tvRiHGlKSGK~LKEfrG 346 (508)
T KOG0275|consen 268 CISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFS-RDNSQILSASFDQTVRIHGLKSGKCLKEFRG 346 (508)
T ss_pred EEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEc-cCcchhhcccccceEEEeccccchhHHHhcC
Confidence 56788889999999999999999999999999987 799999999999 8899999999999999999999999999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|.+.|+...|+++|+++++++.||++++|+.+
T Consensus 347 HsSyvn~a~ft~dG~~iisaSsDgtvkvW~~K 378 (508)
T KOG0275|consen 347 HSSYVNEATFTDDGHHIISASSDGTVKVWHGK 378 (508)
T ss_pred ccccccceEEcCCCCeEEEecCCccEEEecCc
Confidence 99999999999999999999999999999863
No 22
>KOG0269|consensus
Probab=99.89 E-value=2e-22 Score=128.47 Aligned_cols=110 Identities=25% Similarity=0.469 Sum_probs=100.7
Q ss_pred cceEcC-CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceeec
Q psy3639 3 VPRVTS-SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTYR 80 (113)
Q Consensus 3 ~~~~~~-~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~~ 80 (113)
..+|++ .++++++|++||.|++||++..+...++.+....|.+++|+|..+..|+++...|.+++||++.. ++...+.
T Consensus 138 ~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~ 217 (839)
T KOG0269|consen 138 KLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLT 217 (839)
T ss_pred eeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhh
Confidence 445655 45789999999999999999999999999889999999999999999999999999999999875 5778889
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+|.++|.++.|+|++.+|++|+.|++++|||+
T Consensus 218 AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~ 249 (839)
T KOG0269|consen 218 AHNGPVLCLNWHPNREWLATGGRDKMVKIWDM 249 (839)
T ss_pred cccCceEEEeecCCCceeeecCCCccEEEEec
Confidence 99999999999999999999999999999996
No 23
>KOG0286|consensus
Probab=99.89 E-value=9.1e-22 Score=114.17 Aligned_cols=108 Identities=27% Similarity=0.500 Sum_probs=99.6
Q ss_pred ceEcC-CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 4 PRVTS-SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 4 ~~~~~-~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
..++| +++.+++|+-|+..++||++.+.+.++|.+|..-|..++|. |+|.-+++|+.|+++++||++..+.+..+...
T Consensus 192 lsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ff-P~G~afatGSDD~tcRlyDlRaD~~~a~ys~~ 270 (343)
T KOG0286|consen 192 LSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFF-PSGDAFATGSDDATCRLYDLRADQELAVYSHD 270 (343)
T ss_pred EecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEc-cCCCeeeecCCCceeEEEeecCCcEEeeeccC
Confidence 45677 88999999999999999999999999999999999999999 88999999999999999999998877777633
Q ss_pred --ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 --SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 --~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..+|.+++||..|++|+.|..|....+||.
T Consensus 271 ~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 271 SIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred cccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 458999999999999999999999999996
No 24
>KOG0283|consensus
Probab=99.88 E-value=1.5e-22 Score=129.28 Aligned_cols=107 Identities=24% Similarity=0.581 Sum_probs=94.7
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCC--------------------------------C--------------------
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKS--------------------------------G-------------------- 30 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~--------------------------------~-------------------- 30 (113)
++.|+++|+++|+|++|+.|+||.+.. .
T Consensus 272 ~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p 351 (712)
T KOG0283|consen 272 AMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVLLP 351 (712)
T ss_pred EEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCccccCC
Confidence 567999999999999999999998754 0
Q ss_pred --------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEcc-CCCEEEEe
Q psy3639 31 --------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSP-DQSTFCSC 101 (113)
Q Consensus 31 --------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~ 101 (113)
+++..+.+|.+.|.++.|+ . .++|++++.|.+|++|++...+++..|. |...|++++|+| |.++|++|
T Consensus 352 ~~~f~f~ekP~~ef~GHt~DILDlSWS-K-n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSG 428 (712)
T KOG0283|consen 352 LKAFVFSEKPFCEFKGHTADILDLSWS-K-NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISG 428 (712)
T ss_pred Cccccccccchhhhhccchhheecccc-c-CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeec
Confidence 1223455899999999998 4 5788999999999999999999999998 899999999999 88999999
Q ss_pred ecCCcEEEeec
Q psy3639 102 SMDHTARIFNT 112 (113)
Q Consensus 102 ~~~~~i~~~~~ 112 (113)
+-|+.++||++
T Consensus 429 SLD~KvRiWsI 439 (712)
T KOG0283|consen 429 SLDGKVRLWSI 439 (712)
T ss_pred ccccceEEeec
Confidence 99999999986
No 25
>KOG0319|consensus
Probab=99.88 E-value=6.6e-22 Score=125.52 Aligned_cols=108 Identities=25% Similarity=0.404 Sum_probs=104.4
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
++.|++.++.+++++.|++|+||.+.+.++++++.+|+..|....|- .++..+++++.||.+++|++++..++.++..|
T Consensus 510 ~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~-~~~~qliS~~adGliKlWnikt~eC~~tlD~H 588 (775)
T KOG0319|consen 510 CVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFI-RNGKQLISAGADGLIKLWNIKTNECEMTLDAH 588 (775)
T ss_pred EEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeee-eCCcEEEeccCCCcEEEEeccchhhhhhhhhc
Confidence 57899999999999999999999999999999999999999999999 88999999999999999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
+..|++++-+|.+..+++|+.||.|.+|.
T Consensus 589 ~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 589 NDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred cceeEEEeecCccceeEecCCCeEEEEee
Confidence 99999999999999999999999999993
No 26
>KOG0315|consensus
Probab=99.88 E-value=1.3e-21 Score=111.62 Aligned_cols=109 Identities=26% Similarity=0.452 Sum_probs=97.4
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCe--eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGH--EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
+...+.|+++.|++++. ..||+||+.++. ++.++++|+..|..+.|. .+++.+++|++||++++||++...+.+.+
T Consensus 44 NrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~-~dgrWMyTgseDgt~kIWdlR~~~~qR~~ 121 (311)
T KOG0315|consen 44 NRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQ-CDGRWMYTGSEDGTVKIWDLRSLSCQRNY 121 (311)
T ss_pred eeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEe-ecCeEEEecCCCceEEEEeccCcccchhc
Confidence 45678899999999886 469999998875 588999999999999999 89999999999999999999997766666
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+ +..+|+++..+|+...|+++..+|.|++||++
T Consensus 122 ~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~ 154 (311)
T KOG0315|consen 122 Q-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLG 154 (311)
T ss_pred c-CCCCcceEEecCCcceEEeecCCCcEEEEEcc
Confidence 6 66899999999999999999999999999984
No 27
>KOG0302|consensus
Probab=99.88 E-value=2.1e-21 Score=115.85 Aligned_cols=107 Identities=21% Similarity=0.447 Sum_probs=92.0
Q ss_pred ceEcCCCC-EEEeeecCCeEEEeeCCCC---eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc---cccc
Q psy3639 4 PRVTSSPQ-RCLTGSYDRTCKLWDIKSG---HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK---EECI 76 (113)
Q Consensus 4 ~~~~~~~~-~~~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~---~~~~ 76 (113)
.+|+|..+ .|++++-|+.|+|||++.+ ..+.+ +.|..-|.-+.|+ ....++++|+.||++++||+++ ++++
T Consensus 263 LqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWn-r~~~lLasG~DdGt~~iwDLR~~~~~~pV 340 (440)
T KOG0302|consen 263 LQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDVNVISWN-RREPLLASGGDDGTLSIWDLRQFKSGQPV 340 (440)
T ss_pred hccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCceeeEEcc-CCcceeeecCCCceEEEEEhhhccCCCcc
Confidence 36778664 8889999999999999987 34444 6799999999999 5556999999999999999976 4677
Q ss_pred eeecccccceEEEEEcc-CCCEEEEeecCCcEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~ 112 (113)
..++.|..+|.++.|+| +...+++++.|++|.+||+
T Consensus 341 A~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDl 377 (440)
T KOG0302|consen 341 ATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDL 377 (440)
T ss_pred eeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEe
Confidence 89999999999999999 5567889999999999997
No 28
>KOG0273|consensus
Probab=99.88 E-value=2.1e-21 Score=118.35 Aligned_cols=109 Identities=28% Similarity=0.490 Sum_probs=96.0
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-------
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE------- 74 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~------- 74 (113)
...+|+.+|.+|++|.+||.+++|+.. +..+.++..|++||.+++|+ ..+.++++++.|+++.+||..+++
T Consensus 239 T~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~~HkgPI~slKWn-k~G~yilS~~vD~ttilwd~~~g~~~q~f~~ 316 (524)
T KOG0273|consen 239 TSLDWNNDGTLLATGSEDGEARIWNKD-GNLISTLGQHKGPIFSLKWN-KKGTYILSGGVDGTTILWDAHTGTVKQQFEF 316 (524)
T ss_pred ceEEecCCCCeEEEeecCcEEEEEecC-chhhhhhhccCCceEEEEEc-CCCCEEEeccCCccEEEEeccCceEEEeeee
Confidence 456778889999999999999999965 88888998999999999999 899999999999999999964332
Q ss_pred ----------------------------------cceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 75 ----------------------------------CIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 75 ----------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
++.++.+|.++|..+.|+|.|..|++++.|+++++|..
T Consensus 317 ~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~ 388 (524)
T KOG0273|consen 317 HSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSM 388 (524)
T ss_pred ccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeec
Confidence 23344678999999999999999999999999999985
No 29
>KOG0281|consensus
Probab=99.88 E-value=1.7e-22 Score=120.02 Aligned_cols=104 Identities=23% Similarity=0.445 Sum_probs=96.4
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccccc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSA 84 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~ 84 (113)
.+..+.+++++++.|.++++|++.+++.+.++.+|...|-|+... ++++++|+.|.+|++||+..+.+++.+++|+.
T Consensus 325 vVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEe 401 (499)
T KOG0281|consen 325 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 401 (499)
T ss_pred eeccccceEEEecCCceEEEEeccceeeehhhhcccccceehhcc---CeEEEecCCCceEEEEeccccHHHHHHhchHH
Confidence 345677899999999999999999999999999999999999876 89999999999999999999999999999999
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
-|.++.| +.+.+++|..||+|++||+.
T Consensus 402 LvRciRF--d~krIVSGaYDGkikvWdl~ 428 (499)
T KOG0281|consen 402 LVRCIRF--DNKRIVSGAYDGKIKVWDLQ 428 (499)
T ss_pred hhhheee--cCceeeeccccceEEEEecc
Confidence 9999999 56789999999999999973
No 30
>KOG0315|consensus
Probab=99.88 E-value=2.2e-21 Score=110.66 Aligned_cols=110 Identities=25% Similarity=0.495 Sum_probs=88.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-------
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE------- 74 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~------- 74 (113)
..+.|..+|+.+++|++||+++|||++...+.+.++ |..+|.++..+ |+...++++..+|.|++||+....
T Consensus 87 taVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlh-pnQteLis~dqsg~irvWDl~~~~c~~~liP 164 (311)
T KOG0315|consen 87 TAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLH-PNQTELISGDQSGNIRVWDLGENSCTHELIP 164 (311)
T ss_pred EEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEec-CCcceEEeecCCCcEEEEEccCCccccccCC
Confidence 345678899999999999999999999865555555 78999999999 666777889999999999964431
Q ss_pred ------------------------------------------cceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 75 ------------------------------------------CIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 75 ------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
++.+++.|++.+....+||++++|++++.|.+++||++
T Consensus 165 e~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~ 244 (311)
T KOG0315|consen 165 EDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNT 244 (311)
T ss_pred CCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEec
Confidence 12334567778888889999999999999999999986
Q ss_pred C
Q psy3639 113 M 113 (113)
Q Consensus 113 ~ 113 (113)
+
T Consensus 245 ~ 245 (311)
T KOG0315|consen 245 D 245 (311)
T ss_pred C
Confidence 3
No 31
>KOG0276|consensus
Probab=99.88 E-value=3.4e-21 Score=121.08 Aligned_cols=113 Identities=27% Similarity=0.375 Sum_probs=104.3
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCC-eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSG-HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
+.+++++|...+++++++|-+|++||.+.. .+.+++++|..-|.+++|+|.+.+.+++++.|++|++|.+.+..+..++
T Consensus 100 IR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl 179 (794)
T KOG0276|consen 100 IRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTL 179 (794)
T ss_pred eeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceee
Confidence 457789999999999999999999998754 6788999999999999999999999999999999999999999999999
Q ss_pred cccccceEEEEEcc--CCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSP--DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+|...|+++.|-+ +..++++|+.|.++++||..
T Consensus 180 ~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ 215 (794)
T KOG0276|consen 180 EGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ 215 (794)
T ss_pred eccccCcceEEeccCCCcceEEecCCCceEEEeecc
Confidence 99999999999987 44699999999999999963
No 32
>PTZ00421 coronin; Provisional
Probab=99.88 E-value=1e-20 Score=119.59 Aligned_cols=111 Identities=14% Similarity=0.276 Sum_probs=96.1
Q ss_pred CcceEcCCC-CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSP-QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
..++|+|++ +++++++.|+.|++||+.+++.+..+.+|...|.+++|+ +++..+++++.|+.|++||+++++.+..+.
T Consensus 129 ~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~s-pdG~lLatgs~Dg~IrIwD~rsg~~v~tl~ 207 (493)
T PTZ00421 129 GIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWN-LDGSLLCTTSKDKKLNIIDPRDGTIVSSVE 207 (493)
T ss_pred EEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEE-CCCCEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 356788875 699999999999999999999999999999999999999 789999999999999999999998888888
Q ss_pred ccccc-eEEEEEccCCCEEEEee----cCCcEEEeecC
Q psy3639 81 GHSAE-VVGVTFSPDQSTFCSCS----MDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~-v~~~~~~~~~~~~~~~~----~~~~i~~~~~~ 113 (113)
.|.+. ...+.|.+++..+++++ .|+.|++||++
T Consensus 208 ~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr 245 (493)
T PTZ00421 208 AHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTR 245 (493)
T ss_pred cCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCC
Confidence 77653 45678999888777654 47899999975
No 33
>KOG0318|consensus
Probab=99.88 E-value=7.7e-21 Score=117.31 Aligned_cols=111 Identities=26% Similarity=0.460 Sum_probs=100.0
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee---CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc--
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR---GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC-- 75 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~-- 75 (113)
+++++++|+|+++++.+.||++.+||-.+++.+..+. .|++.|.+++|+ |++..+++.+.|.++++||+.+.++
T Consensus 193 V~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWs-PDs~~~~T~SaDkt~KIWdVs~~slv~ 271 (603)
T KOG0318|consen 193 VNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWS-PDSTQFLTVSADKTIKIWDVSTNSLVS 271 (603)
T ss_pred eeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEEC-CCCceEEEecCCceEEEEEeeccceEE
Confidence 4688999999999999999999999999999999987 799999999999 8899999999999999999755433
Q ss_pred -----------------------------------------ceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 -----------------------------------------IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 -----------------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+..+.+|...|.++..+|++.++++++.||.|.-|+.
T Consensus 272 t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~ 349 (603)
T KOG0318|consen 272 TWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDS 349 (603)
T ss_pred EeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEec
Confidence 2233578899999999999999999999999999986
No 34
>KOG0282|consensus
Probab=99.88 E-value=2.5e-22 Score=122.46 Aligned_cols=110 Identities=25% Similarity=0.465 Sum_probs=99.6
Q ss_pred CcceEcC-CCCEEEeeecCCeEEEeeCCC-CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 2 GVPRVTS-SPQRCLTGSYDRTCKLWDIKS-GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 2 ~~~~~~~-~~~~~~~~~~d~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
.++.|.| .++++++++.|+.|+||++.. +++++++.+|..+|.+++|+ ..+..+.+++.|+.+++||..+|+++..+
T Consensus 218 sai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s-~~g~~fLS~sfD~~lKlwDtETG~~~~~f 296 (503)
T KOG0282|consen 218 SAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFN-NCGTSFLSASFDRFLKLWDTETGQVLSRF 296 (503)
T ss_pred chhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhcc-ccCCeeeeeecceeeeeeccccceEEEEE
Confidence 3455667 789999999999999999876 78999999999999999999 88999999999999999999999999988
Q ss_pred cccccceEEEEEccCC-CEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPDQ-STFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 113 (113)
. ....+.++.|+|++ +.+++|+.|+.|+.||+|
T Consensus 297 ~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiR 330 (503)
T KOG0282|consen 297 H-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIR 330 (503)
T ss_pred e-cCCCceeeecCCCCCcEEEEecCCCcEEEEecc
Confidence 7 34567899999988 889999999999999986
No 35
>KOG0645|consensus
Probab=99.87 E-value=1.3e-20 Score=108.42 Aligned_cols=110 Identities=28% Similarity=0.530 Sum_probs=100.0
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCC--eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc---ccc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSG--HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE---ECI 76 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~---~~~ 76 (113)
.-++++|.+++|++++.|.++.||.-..+ +++.++++|...|.+++|+ .+|++|++++.|..|-+|.+... ++.
T Consensus 65 RsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws-~sG~~LATCSRDKSVWiWe~deddEfec~ 143 (312)
T KOG0645|consen 65 RSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWS-ASGNYLATCSRDKSVWIWEIDEDDEFECI 143 (312)
T ss_pred eeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEc-CCCCEEEEeeCCCeEEEEEecCCCcEEEE
Confidence 34689999999999999999999987644 6889999999999999999 88999999999999999998754 567
Q ss_pred eeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..++.|.+.|..+.|+|....|++++.|++|++|+-
T Consensus 144 aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~ 179 (312)
T KOG0645|consen 144 AVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRD 179 (312)
T ss_pred eeeccccccccEEEEcCCcceeEEeccCCeEEEEee
Confidence 888999999999999999999999999999999963
No 36
>KOG0264|consensus
Probab=99.87 E-value=3.4e-21 Score=116.47 Aligned_cols=110 Identities=24% Similarity=0.352 Sum_probs=96.4
Q ss_pred ceEcCC-CCEEEeeecCCeEEEeeCC--CCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceee
Q psy3639 4 PRVTSS-PQRCLTGSYDRTCKLWDIK--SGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTY 79 (113)
Q Consensus 4 ~~~~~~-~~~~~~~~~d~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~ 79 (113)
++|++. ..+|++.++|+.+.|||++ +.++....+.|.+++.+++|+|.++..+++|+.|++|.+||+++. +++.++
T Consensus 233 V~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~ 312 (422)
T KOG0264|consen 233 VAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTF 312 (422)
T ss_pred hhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceec
Confidence 345554 4588999999999999999 566777888899999999999999999999999999999999985 578899
Q ss_pred cccccceEEEEEccC-CCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPD-QSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 113 (113)
.+|+..|..+.|+|. ...|++++.|+.+.+||+.
T Consensus 313 e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls 347 (422)
T KOG0264|consen 313 EGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLS 347 (422)
T ss_pred cCCCcceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence 999999999999994 4567889999999999973
No 37
>KOG0285|consensus
Probab=99.87 E-value=2e-21 Score=115.56 Aligned_cols=109 Identities=25% Similarity=0.470 Sum_probs=102.7
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
+++++...++.++++|+.|+.||++..+.++.+.+|-..|.+++.+ |.-..+++++.|.++++||+++...+..+.+|.
T Consensus 199 vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lh-PTldvl~t~grDst~RvWDiRtr~~V~~l~GH~ 277 (460)
T KOG0285|consen 199 VAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLH-PTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHT 277 (460)
T ss_pred eeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEecc-ccceeEEecCCcceEEEeeecccceEEEecCCC
Confidence 5678888899999999999999999999999999999999999999 778899999999999999999999999999999
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+|.++.+.|-.-.+++++.|++|++||++
T Consensus 278 ~~V~~V~~~~~dpqvit~S~D~tvrlWDl~ 307 (460)
T KOG0285|consen 278 NPVASVMCQPTDPQVITGSHDSTVRLWDLR 307 (460)
T ss_pred CcceeEEeecCCCceEEecCCceEEEeeec
Confidence 999999999877779999999999999985
No 38
>KOG0284|consensus
Probab=99.87 E-value=6.9e-22 Score=118.73 Aligned_cols=110 Identities=34% Similarity=0.516 Sum_probs=103.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.+++|+|...++++++.|..|++||.++++++.++.+|+..|..+.|+ +++++|++++.|..++++|+++.+.++.+++
T Consensus 226 ksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~-~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~ 304 (464)
T KOG0284|consen 226 KSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFN-PNGNWLLTGSKDQSCKVFDIRTMKELFTYRG 304 (464)
T ss_pred ceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEc-CCCCeeEEccCCceEEEEehhHhHHHHHhhc
Confidence 467899999999999999999999999999999999999999999999 7789999999999999999999999999999
Q ss_pred cccceEEEEEcc-CCCEEEEeecCCcEEEeec
Q psy3639 82 HSAEVVGVTFSP-DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 82 ~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~ 112 (113)
|+..+.++.|+| ....|.+++.||.+..|.+
T Consensus 305 Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v 336 (464)
T KOG0284|consen 305 HKKDVTSLTWHPLNESLFTSGGSDGSVVHWVV 336 (464)
T ss_pred chhhheeeccccccccceeeccCCCceEEEec
Confidence 999999999999 6667889999999999975
No 39
>KOG0265|consensus
Probab=99.87 E-value=7e-21 Score=110.75 Aligned_cols=111 Identities=23% Similarity=0.344 Sum_probs=97.8
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCC-CCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIK-SGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
....|+|++..|++|+.|..|.+|+.. ..+....+++|.+.|..+.+. +++..+++++.|.+++.||.++++..+.++
T Consensus 51 ~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~-~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k 129 (338)
T KOG0265|consen 51 YTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGM-RDGSHILSCGTDKTVRGWDAETGKRIRKHK 129 (338)
T ss_pred EEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeec-cCCCEEEEecCCceEEEEecccceeeehhc
Confidence 456899999999999999999999954 445677888999999999999 889999999999999999999999999999
Q ss_pred ccccceEEEEEccCCC-EEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQS-TFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 113 (113)
+|..-++.+.-+..|. .+.+++.|+++++||+|
T Consensus 130 ~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R 163 (338)
T KOG0265|consen 130 GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR 163 (338)
T ss_pred cccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence 9999988887544444 45678889999999986
No 40
>KOG0277|consensus
Probab=99.87 E-value=1.1e-20 Score=108.06 Aligned_cols=104 Identities=26% Similarity=0.459 Sum_probs=94.5
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGV 89 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~ 89 (113)
.+.+++++.|++|++|+...+..+.++.+|...|...+|+|..++++++++.|+++++||++..-....+..|...+.++
T Consensus 117 r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~c 196 (311)
T KOG0277|consen 117 RRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCC 196 (311)
T ss_pred ceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEee
Confidence 45788889999999999999999999999999999999999999999999999999999998765455588888899999
Q ss_pred EEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 90 TFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 90 ~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
.|+. +.+.+++++.|+.|+.||+|
T Consensus 197 dw~ky~~~vl~Tg~vd~~vr~wDir 221 (311)
T KOG0277|consen 197 DWSKYNHNVLATGGVDNLVRGWDIR 221 (311)
T ss_pred cccccCCcEEEecCCCceEEEEehh
Confidence 9998 67788999999999999986
No 41
>KOG0277|consensus
Probab=99.87 E-value=4.3e-21 Score=109.69 Aligned_cols=110 Identities=27% Similarity=0.490 Sum_probs=98.6
Q ss_pred ceEcCCC-CEEEeeecCCeEEEeeCCC-CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 4 PRVTSSP-QRCLTGSYDRTCKLWDIKS-GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 4 ~~~~~~~-~~~~~~~~d~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
++|+++. +.+++++.||.+++||... .++++.++.|...|.++.|++...+.+++++-|++|++|+....+.+.++.+
T Consensus 66 V~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g 145 (311)
T KOG0277|consen 66 VAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNG 145 (311)
T ss_pred eeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecC
Confidence 3566654 5788899999999999643 3578889999999999999988889999999999999999999999999999
Q ss_pred cccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
|...|+..+|+| .++.+++++.|+++++||++
T Consensus 146 h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr 178 (311)
T KOG0277|consen 146 HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVR 178 (311)
T ss_pred CccEEEEEecCCCCCCeEEEccCCceEEEEEec
Confidence 999999999999 78899999999999999985
No 42
>KOG0292|consensus
Probab=99.86 E-value=4.9e-21 Score=124.26 Aligned_cols=110 Identities=26% Similarity=0.444 Sum_probs=105.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.-++|+|++.++++|++|-+|++|+.++.+++.++.+|-.-|..+.|+ +.-.++++++.|.+|++|+.++.+++..+.+
T Consensus 55 Rgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FH-heyPWIlSASDDQTIrIWNwqsr~~iavltG 133 (1202)
T KOG0292|consen 55 RGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFH-HEYPWILSASDDQTIRIWNWQSRKCIAVLTG 133 (1202)
T ss_pred ceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeecc-CCCceEEEccCCCeEEEEeccCCceEEEEec
Confidence 456899999999999999999999999999999999999999999999 7788999999999999999999999999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
|...|-+-+|+|....+++++-|.+|++||+
T Consensus 134 HnHYVMcAqFhptEDlIVSaSLDQTVRVWDi 164 (1202)
T KOG0292|consen 134 HNHYVMCAQFHPTEDLIVSASLDQTVRVWDI 164 (1202)
T ss_pred CceEEEeeccCCccceEEEecccceEEEEee
Confidence 9999999999999999999999999999997
No 43
>KOG0282|consensus
Probab=99.86 E-value=4.4e-21 Score=117.06 Aligned_cols=110 Identities=25% Similarity=0.477 Sum_probs=101.9
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
-++|+.++..+++++.|+.+++||+++|+++..+. ....+.++.++|.+.+.+++|+.|+.|+.||+++++.++.+..|
T Consensus 263 d~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~h 341 (503)
T KOG0282|consen 263 DASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRH 341 (503)
T ss_pred hhhccccCCeeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhh
Confidence 35788999999999999999999999999999987 56678999999766689999999999999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
-+.+..+.|-++|+.+++.++|+.+++|+.+
T Consensus 342 Lg~i~~i~F~~~g~rFissSDdks~riWe~~ 372 (503)
T KOG0282|consen 342 LGAILDITFVDEGRRFISSSDDKSVRIWENR 372 (503)
T ss_pred hhheeeeEEccCCceEeeeccCccEEEEEcC
Confidence 9999999999999999999999999999853
No 44
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.86 E-value=5e-20 Score=122.35 Aligned_cols=109 Identities=18% Similarity=0.362 Sum_probs=96.2
Q ss_pred ceEcC-CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 4 PRVTS-SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 4 ~~~~~-~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
.+|++ .+..+++++.|+.|++||+.+++.+..+.+|...|.+++|+|.++..+++++.|+.|++||++++..+..+..+
T Consensus 538 l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~ 617 (793)
T PLN00181 538 ICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK 617 (793)
T ss_pred EEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC
Confidence 45554 46789999999999999999999999999999999999999778899999999999999999998887777643
Q ss_pred ccceEEEEEc-cCCCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFS-PDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~-~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..+.++.|+ ++|.++++++.|+.|++||++
T Consensus 618 -~~v~~v~~~~~~g~~latgs~dg~I~iwD~~ 648 (793)
T PLN00181 618 -ANICCVQFPSESGRSLAFGSADHKVYYYDLR 648 (793)
T ss_pred -CCeEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 578889995 579999999999999999974
No 45
>KOG0647|consensus
Probab=99.86 E-value=1.1e-20 Score=110.12 Aligned_cols=111 Identities=23% Similarity=0.443 Sum_probs=94.0
Q ss_pred CCcceEcCCC-CEEEeeecCCeEEEeeCCCC-ee-eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce
Q psy3639 1 MGVPRVTSSP-QRCLTGSYDRTCKLWDIKSG-HE-ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 1 ~~~~~~~~~~-~~~~~~~~d~~v~i~~~~~~-~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~ 77 (113)
|..++|+|.. .+++.++.|++||+|++... .. -.....|.+++.+++|+ .++..+++++.|+.+++||+.+++ +.
T Consensus 30 IS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Ws-ddgskVf~g~~Dk~~k~wDL~S~Q-~~ 107 (347)
T KOG0647|consen 30 ISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWS-DDGSKVFSGGCDKQAKLWDLASGQ-VS 107 (347)
T ss_pred hheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEc-cCCceEEeeccCCceEEEEccCCC-ee
Confidence 3567899954 56668999999999998763 32 24455699999999999 889999999999999999999996 67
Q ss_pred eecccccceEEEEEccCCC--EEEEeecCCcEEEeecC
Q psy3639 78 TYRGHSAEVVGVTFSPDQS--TFCSCSMDHTARIFNTM 113 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~i~~~~~~ 113 (113)
+...|..+|..+.|-+... .|++|+.|.+|++||+|
T Consensus 108 ~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R 145 (347)
T KOG0647|consen 108 QVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR 145 (347)
T ss_pred eeeecccceeEEEEecCCCcceeEecccccceeecccC
Confidence 7777999999999987555 78999999999999986
No 46
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.86 E-value=4.4e-20 Score=122.65 Aligned_cols=111 Identities=12% Similarity=0.282 Sum_probs=94.9
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCC----e----eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSG----H----EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~----~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
..++|+|+++++++|+.|+.|++|+.... . +...+. +...+.+++|+|..+..+++++.||.|++||+.++
T Consensus 487 ~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~ 565 (793)
T PLN00181 487 CAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARS 565 (793)
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCC
Confidence 35689999999999999999999997531 1 222333 34678999999777889999999999999999999
Q ss_pred ccceeecccccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 74 ECIQTYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 74 ~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.+..+.+|...|++++|+| ++.+|++++.|+.|++||++
T Consensus 566 ~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~ 606 (793)
T PLN00181 566 QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 606 (793)
T ss_pred eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECC
Confidence 88899999999999999997 78999999999999999974
No 47
>KOG0295|consensus
Probab=99.86 E-value=3.6e-20 Score=110.06 Aligned_cols=103 Identities=34% Similarity=0.551 Sum_probs=97.7
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGV 89 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~ 89 (113)
++.+.+++.|++|++||+.++.++.++.+|.+.|..++|+ |.|++++++..|+++++||++..++...+..|+.-+.++
T Consensus 304 ~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~-p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~l 382 (406)
T KOG0295|consen 304 GQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFS-PGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSL 382 (406)
T ss_pred ccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEc-CCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEE
Confidence 3689999999999999999999999999999999999999 889999999999999999999999999999999999999
Q ss_pred EEccCCCEEEEeecCCcEEEeecC
Q psy3639 90 TFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|+.+..++++|+-|.++++|.-|
T Consensus 383 Dfh~~~p~VvTGsVdqt~KvwEcr 406 (406)
T KOG0295|consen 383 DFHKTAPYVVTGSVDQTVKVWECR 406 (406)
T ss_pred ecCCCCceEEeccccceeeeeecC
Confidence 999988899999999999999743
No 48
>KOG0645|consensus
Probab=99.86 E-value=5.6e-20 Score=105.84 Aligned_cols=110 Identities=28% Similarity=0.432 Sum_probs=99.7
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCC---eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC---cccc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSG---HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA---KEEC 75 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~---~~~~ 75 (113)
.+++|+++|++||+++.|+.|-+|.+..+ ++...++.|..-|..+.|+ |...+|++++.|++|++|+-. ..++
T Consensus 109 K~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WH-Pt~dlL~S~SYDnTIk~~~~~~dddW~c 187 (312)
T KOG0645|consen 109 KCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWH-PTEDLLFSCSYDNTIKVYRDEDDDDWEC 187 (312)
T ss_pred eEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEc-CCcceeEEeccCCeEEEEeecCCCCeeE
Confidence 57899999999999999999999998744 4678889999999999999 678899999999999999765 3478
Q ss_pred ceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+.++.+|+..|++++|++.|..+++++.|++++||.+
T Consensus 188 ~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~ 224 (312)
T KOG0645|consen 188 VQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRL 224 (312)
T ss_pred EEEecCccceEEEEEecCCCceEEEecCCcceEeeee
Confidence 8999999999999999999999999999999999973
No 49
>KOG0283|consensus
Probab=99.86 E-value=1.4e-20 Score=120.41 Aligned_cols=109 Identities=21% Similarity=0.384 Sum_probs=96.0
Q ss_pred cceEcCCC-CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 3 VPRVTSSP-QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 3 ~~~~~~~~-~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
+..+++.. ++|++++-|++|++|++....++.+|. |...|+|++|+|.+.++|++|+.||++++|++...+.+.-..
T Consensus 372 ILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D- 449 (712)
T KOG0283|consen 372 ILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND- 449 (712)
T ss_pred heecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh-
Confidence 34455544 588999999999999999999999998 999999999999999999999999999999998887655554
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
-..-|.+++|.|+|++.++|+.+|..++|+++
T Consensus 450 l~~lITAvcy~PdGk~avIGt~~G~C~fY~t~ 481 (712)
T KOG0283|consen 450 LRDLITAVCYSPDGKGAVIGTFNGYCRFYDTE 481 (712)
T ss_pred hhhhheeEEeccCCceEEEEEeccEEEEEEcc
Confidence 34678999999999999999999999999864
No 50
>KOG0289|consensus
Probab=99.86 E-value=4.8e-20 Score=111.72 Aligned_cols=110 Identities=21% Similarity=0.331 Sum_probs=99.4
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeC--CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRG--HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
....+|+++++++++.|++..+.|+.+++.+..... ..-.+++.+|+ |+|.+|.+|..|+.+++||+.+...+..|.
T Consensus 308 ~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH-pDgLifgtgt~d~~vkiwdlks~~~~a~Fp 386 (506)
T KOG0289|consen 308 GLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFH-PDGLIFGTGTPDGVVKIWDLKSQTNVAKFP 386 (506)
T ss_pred eeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEc-CCceEEeccCCCceEEEEEcCCccccccCC
Confidence 345789999999999999999999999987765542 22358999999 899999999999999999999999999999
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|+++|..++|+.+|-++++++.|+.|++||+|
T Consensus 387 ght~~vk~i~FsENGY~Lat~add~~V~lwDLR 419 (506)
T KOG0289|consen 387 GHTGPVKAISFSENGYWLATAADDGSVKLWDLR 419 (506)
T ss_pred CCCCceeEEEeccCceEEEEEecCCeEEEEEeh
Confidence 999999999999999999999999999999986
No 51
>KOG0275|consensus
Probab=99.85 E-value=9.7e-22 Score=116.15 Aligned_cols=110 Identities=25% Similarity=0.459 Sum_probs=99.1
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEe--------eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTY--------RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
-|..|+|+++++++|+.||.|.+||..+|+....+ --+...|.|+.|+ .+...+++|+.||.|++|.+.++
T Consensus 217 EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FS-RDsEMlAsGsqDGkIKvWri~tG 295 (508)
T KOG0275|consen 217 ECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFS-RDSEMLASGSQDGKIKVWRIETG 295 (508)
T ss_pred hheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeec-ccHHHhhccCcCCcEEEEEEecc
Confidence 36789999999999999999999999988754433 2467889999999 88999999999999999999999
Q ss_pred ccceeec-ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 74 ECIQTYR-GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 74 ~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+++.+. .|...|.++.|+.|+..+++++.|.++++.-+
T Consensus 296 ~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGl 335 (508)
T KOG0275|consen 296 QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGL 335 (508)
T ss_pred hHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEecc
Confidence 9999997 78999999999999999999999999998755
No 52
>KOG0276|consensus
Probab=99.85 E-value=7.9e-21 Score=119.47 Aligned_cols=110 Identities=31% Similarity=0.483 Sum_probs=100.7
Q ss_pred cceEcCCC-CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcC-CCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 3 VPRVTSSP-QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSE-PYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 3 ~~~~~~~~-~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
.++|+|.+ +.+++++-|++|++|++.+..+.+++++|...|.++.+-+ .+..++++|+.|.++++||.++..++.++.
T Consensus 145 qv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLe 224 (794)
T KOG0276|consen 145 QVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLE 224 (794)
T ss_pred EEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhh
Confidence 35677754 6999999999999999999999999999999999999873 234699999999999999999999999999
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+|...|..+.|+|.-..+++|++||++++|+.
T Consensus 225 GHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs 256 (794)
T KOG0276|consen 225 GHTNNVSFVFFHPELPIIISGSEDGTVRIWNS 256 (794)
T ss_pred cccccceEEEecCCCcEEEEecCCccEEEecC
Confidence 99999999999999999999999999999974
No 53
>KOG0310|consensus
Probab=99.85 E-value=4.7e-21 Score=116.92 Aligned_cols=110 Identities=24% Similarity=0.297 Sum_probs=99.7
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
.+|-.+|+++++|++.|.|++||+.+...+..+..|+.++..+.|+|.++..+++|+.|+.+++||+.+......+.+|+
T Consensus 74 ~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~ht 153 (487)
T KOG0310|consen 74 VDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHT 153 (487)
T ss_pred EEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCc
Confidence 46778899999999999999999777667889999999999999998888899999999999999999987666888999
Q ss_pred cceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 84 AEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 84 ~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
..|.+.+|+| ++..+++|+.||.|++||+|
T Consensus 154 DYVR~g~~~~~~~hivvtGsYDg~vrl~DtR 184 (487)
T KOG0310|consen 154 DYVRCGDISPANDHIVVTGSYDGKVRLWDTR 184 (487)
T ss_pred ceeEeeccccCCCeEEEecCCCceEEEEEec
Confidence 9999999999 45678999999999999986
No 54
>KOG0294|consensus
Probab=99.85 E-value=2.4e-20 Score=109.24 Aligned_cols=111 Identities=21% Similarity=0.389 Sum_probs=102.2
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCC-CEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG-DKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
.+.++.-++.++++|+.|.+|+|||+.....+..+-.|.+.++++.|.++.. ..+++|+.||.|.+|+....+++.+++
T Consensus 45 sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK 124 (362)
T KOG0294|consen 45 SITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLK 124 (362)
T ss_pred ceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeec
Confidence 3567788899999999999999999999999999999999999999985432 388999999999999999999999999
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+|...|+.++.+|.++..++.+.|+.++.||+
T Consensus 125 ~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL 156 (362)
T KOG0294|consen 125 AHKGQVTDLSIHPSGKLALSVGGDQVLRTWNL 156 (362)
T ss_pred ccccccceeEecCCCceEEEEcCCceeeeehh
Confidence 99999999999999999999999999999997
No 55
>KOG0318|consensus
Probab=99.85 E-value=7.1e-20 Score=113.13 Aligned_cols=110 Identities=24% Similarity=0.398 Sum_probs=98.5
Q ss_pred CcceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
+.+.+-|... +++++++|..|.+|+-...+-..++..|...|.++.++ |++..+++.+.||++.+||-.+++.+..+.
T Consensus 151 ns~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRys-PDG~~Fat~gsDgki~iyDGktge~vg~l~ 229 (603)
T KOG0318|consen 151 NSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYS-PDGSRFATAGSDGKIYIYDGKTGEKVGELE 229 (603)
T ss_pred eeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEEC-CCCCeEEEecCCccEEEEcCCCccEEEEec
Confidence 3455666554 78999999999999876666667788899999999999 789999999999999999999999888887
Q ss_pred ---ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 ---GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+|.+.|++++|+||+..+++++.|.++++||+
T Consensus 230 ~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdV 264 (603)
T KOG0318|consen 230 DSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDV 264 (603)
T ss_pred CCCCccccEEEEEECCCCceEEEecCCceEEEEEe
Confidence 88999999999999999999999999999997
No 56
>KOG0278|consensus
Probab=99.85 E-value=6.4e-20 Score=104.99 Aligned_cols=106 Identities=27% Similarity=0.421 Sum_probs=85.5
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCe----------------------------------------EE
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNV----------------------------------------VY 44 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~----------------------------------------v~ 44 (113)
-|...++-++++.+|++||+||.+++..++++. ...+ |.
T Consensus 150 ~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~ 228 (334)
T KOG0278|consen 150 LWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVE 228 (334)
T ss_pred EEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccc
Confidence 455667788888999999999999998777665 2222 33
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee-cccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 45 AVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY-RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+..++ |+...++.|+.|..++-||..+++.+..+ ++|.++|.++.|+|+|...++|++||+|++|.+
T Consensus 229 SASL~-P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt 296 (334)
T KOG0278|consen 229 SASLH-PKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQT 296 (334)
T ss_pred ccccc-CCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEe
Confidence 44445 55577788888888888888888777775 789999999999999999999999999999975
No 57
>KOG0313|consensus
Probab=99.85 E-value=2.4e-20 Score=111.30 Aligned_cols=109 Identities=28% Similarity=0.478 Sum_probs=98.8
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCe---eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-cce
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGH---EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE-CIQ 77 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~-~~~ 77 (113)
.++..+|..+++++|+.|..+++||.+++. ..+++.+|.+.|..+.|+|.+..+|++++.|+++++||+++.+ +++
T Consensus 304 ~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~ply 383 (423)
T KOG0313|consen 304 NCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLY 383 (423)
T ss_pred eEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcce
Confidence 456678888999999999999999998764 4678889999999999999989999999999999999999987 899
Q ss_pred eecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.+.+|...|.++.|+ ++..+++|+.|.+++++.
T Consensus 384 dI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 384 DIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred eeccCCceEEEEecc-CCceEEeccCcceEEEec
Confidence 999999999999998 467899999999999985
No 58
>KOG0973|consensus
Probab=99.85 E-value=3.7e-20 Score=121.19 Aligned_cols=111 Identities=28% Similarity=0.497 Sum_probs=102.3
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCC----------C--------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCC
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKS----------G--------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFD 62 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~----------~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 62 (113)
++|++|+++|++||+|++|+.|.+|.... + +....+.+|...|.+++|+ |++.++++++.|
T Consensus 72 v~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Ws-p~~~~lvS~s~D 150 (942)
T KOG0973|consen 72 VNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWS-PDDSLLVSVSLD 150 (942)
T ss_pred eeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccC-CCccEEEEeccc
Confidence 46889999999999999999999999762 0 2456778999999999999 689999999999
Q ss_pred CcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 63 KTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 63 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
++|.+|+.++.+.+..+.+|.+.|..+.|.|-|++|++-+.|++|++|++
T Consensus 151 nsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt 200 (942)
T KOG0973|consen 151 NSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRT 200 (942)
T ss_pred ceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEc
Confidence 99999999999999999999999999999999999999999999999985
No 59
>PTZ00420 coronin; Provisional
Probab=99.84 E-value=4.5e-19 Score=113.27 Aligned_cols=110 Identities=10% Similarity=0.184 Sum_probs=91.6
Q ss_pred CcceEcCCCCE-EEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSPQR-CLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
..++|+|++.. +++++.|+.|++||+.+++....+. +...+.+++|+ +++.++++++.|+.|++||+++++.+.++.
T Consensus 129 ~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slsws-pdG~lLat~s~D~~IrIwD~Rsg~~i~tl~ 206 (568)
T PTZ00420 129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWN-IKGNLLSGTCVGKHMHIIDPRKQEIASSFH 206 (568)
T ss_pred EEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEEC-CCCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 45688998875 5789999999999999988777776 66789999999 789999999999999999999999888888
Q ss_pred ccccceE-----EEEEccCCCEEEEeecCC----cEEEeecC
Q psy3639 81 GHSAEVV-----GVTFSPDQSTFCSCSMDH----TARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~-----~~~~~~~~~~~~~~~~~~----~i~~~~~~ 113 (113)
+|.+.+. ...|++++.++++++.++ .|++||++
T Consensus 207 gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr 248 (568)
T PTZ00420 207 IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLK 248 (568)
T ss_pred cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECC
Confidence 8876432 234568889999887764 79999975
No 60
>KOG0310|consensus
Probab=99.84 E-value=1.8e-19 Score=110.18 Aligned_cols=109 Identities=21% Similarity=0.402 Sum_probs=95.0
Q ss_pred CcceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceee
Q psy3639 2 GVPRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTY 79 (113)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~ 79 (113)
..+.|+|+++ .+++|++|+.+++||+.+......+.+|+.-|.+.+++|.++..+++|+.||+|++||.+.. ..+.++
T Consensus 114 ~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el 193 (487)
T KOG0310|consen 114 HVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL 193 (487)
T ss_pred eEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe
Confidence 3567888765 77789999999999999888766889999999999999888889999999999999999987 566666
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
. |+.+|.++.+-|.|..+++++ .+.+++||+
T Consensus 194 n-hg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl 224 (487)
T KOG0310|consen 194 N-HGCPVESVLALPSGSLIASAG-GNSVKVWDL 224 (487)
T ss_pred c-CCCceeeEEEcCCCCEEEEcC-CCeEEEEEe
Confidence 6 889999999999999888775 578999997
No 61
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.84 E-value=7e-19 Score=103.30 Aligned_cols=111 Identities=35% Similarity=0.567 Sum_probs=99.7
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
..++++|+++++++++.++.+++|+..+++....+..|...+..+.++ +++..+++++.+|.+++||+..++.+..+..
T Consensus 13 ~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~ 91 (289)
T cd00200 13 TCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS-ADGTYLASGSSDKTIRLWDLETGECVRTLTG 91 (289)
T ss_pred EEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEEC-CCCCEEEEEcCCCeEEEEEcCcccceEEEec
Confidence 456789999999999999999999999888888888899999999999 6678999999999999999998887888888
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+...+.++.|+|+++++++++.++.+.+||++
T Consensus 92 ~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~ 123 (289)
T cd00200 92 HTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE 123 (289)
T ss_pred cCCcEEEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 88899999999998888888889999999974
No 62
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.83 E-value=4.6e-19 Score=104.05 Aligned_cols=109 Identities=39% Similarity=0.643 Sum_probs=98.1
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
...+++|+++.+++++.++.+++||+.+++.+..+..|...+.++.++ +++.++++++.++.+++||+.+++....+..
T Consensus 181 ~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 259 (289)
T cd00200 181 NSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFS-PDGYLLASGSEDGTIRVWDLRTGECVQTLSG 259 (289)
T ss_pred ceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEc-CCCcEEEEEcCCCcEEEEEcCCceeEEEccc
Confidence 356788999889998889999999999888888887888899999999 5688888888899999999998888888888
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
+...+.+++|+|++..+++++.|+.+++|+
T Consensus 260 ~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 260 HTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 888999999999999999999999999996
No 63
>KOG0265|consensus
Probab=99.83 E-value=1.2e-19 Score=105.64 Aligned_cols=109 Identities=25% Similarity=0.398 Sum_probs=97.1
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
+.+..+++.+++++.|++++.||+++|+..+.+++|...+..+.-+.....++.+++.|+++++||+++..+++++. ..
T Consensus 96 l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~k 174 (338)
T KOG0265|consen 96 LHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NK 174 (338)
T ss_pred eeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cc
Confidence 35788999999999999999999999999999999999999998664555677899999999999999998888886 33
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
-++.++.|..++..+++|+-|+.|++||+|
T Consensus 175 yqltAv~f~d~s~qv~sggIdn~ikvWd~r 204 (338)
T KOG0265|consen 175 YQLTAVGFKDTSDQVISGGIDNDIKVWDLR 204 (338)
T ss_pred eeEEEEEecccccceeeccccCceeeeccc
Confidence 467899999999999999999999999984
No 64
>KOG0305|consensus
Probab=99.83 E-value=1.5e-19 Score=112.59 Aligned_cols=111 Identities=23% Similarity=0.361 Sum_probs=96.7
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC--CCcEEEEeCCcccc----
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF--DKTLKLWASAKEEC---- 75 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~v~~wd~~~~~~---- 75 (113)
+...|++++.++++|+.|..+.|||.....+...+..|.+.|..++|+|-...+|++|+. |+.|++||..+++.
T Consensus 305 CgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v 384 (484)
T KOG0305|consen 305 CGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV 384 (484)
T ss_pred eeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc
Confidence 456789999999999999999999998888899999999999999999988889988665 88999999655433
Q ss_pred ---------------------------------------ceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 ---------------------------------------IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 ---------------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+..+.+|...|..++++|+|..+++++.|+++++|++
T Consensus 385 dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~ 460 (484)
T KOG0305|consen 385 DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNL 460 (484)
T ss_pred ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccc
Confidence 2223578889999999999999999999999999975
No 65
>KOG0303|consensus
Probab=99.83 E-value=1.4e-19 Score=108.76 Aligned_cols=108 Identities=22% Similarity=0.392 Sum_probs=97.6
Q ss_pred eEcC-CCCEEEeeecCCeEEEeeCCCC-------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccc
Q psy3639 5 RVTS-SPQRCLTGSYDRTCKLWDIKSG-------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECI 76 (113)
Q Consensus 5 ~~~~-~~~~~~~~~~d~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~ 76 (113)
+|+| +++.+|+|++|.+|.+|.+..+ +++..+.+|...|--++|+|.-.+.+++++.|++|.+|++.+++.+
T Consensus 88 ~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeal 167 (472)
T KOG0303|consen 88 DWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEAL 167 (472)
T ss_pred ccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCcee
Confidence 4555 5678999999999999998765 3567888999999999999888899999999999999999999988
Q ss_pred eeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.++. |..-|+++.|+.+|..+++.+.|..|+|||.+
T Consensus 168 i~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr 203 (472)
T KOG0303|consen 168 ITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPR 203 (472)
T ss_pred eecC-CCCeEEEEEeccCCceeeeecccceeEEEcCC
Confidence 8888 88899999999999999999999999999964
No 66
>KOG0291|consensus
Probab=99.83 E-value=4.3e-19 Score=113.58 Aligned_cols=109 Identities=25% Similarity=0.426 Sum_probs=99.9
Q ss_pred ceEcCCCCEEEeeec-CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 4 PRVTSSPQRCLTGSY-DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+.++..|+.++.|+. -|.+.+|+..+..-+...++|...+.+++.+ |+|+.+++|+.||+|++||..++-|+.++..|
T Consensus 313 ~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YS-pDgq~iaTG~eDgKVKvWn~~SgfC~vTFteH 391 (893)
T KOG0291|consen 313 VSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYS-PDGQLIATGAEDGKVKVWNTQSGFCFVTFTEH 391 (893)
T ss_pred EEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEEC-CCCcEEEeccCCCcEEEEeccCceEEEEeccC
Confidence 456777999998765 4789999998877777778899999999999 89999999999999999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
++.|..++|+..|+.+++++-||+++.||+.
T Consensus 392 ts~Vt~v~f~~~g~~llssSLDGtVRAwDlk 422 (893)
T KOG0291|consen 392 TSGVTAVQFTARGNVLLSSSLDGTVRAWDLK 422 (893)
T ss_pred CCceEEEEEEecCCEEEEeecCCeEEeeeec
Confidence 9999999999999999999999999999974
No 67
>KOG0289|consensus
Probab=99.82 E-value=3e-19 Score=108.33 Aligned_cols=108 Identities=25% Similarity=0.349 Sum_probs=97.0
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
..+|+|+|.+|.+|..|+.+++||+.++..+..|.+|.++|..++|+ .+|.+++++..|+.|++||++..+.+.++...
T Consensus 352 s~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~Fs-ENGY~Lat~add~~V~lwDLRKl~n~kt~~l~ 430 (506)
T KOG0289|consen 352 SAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFS-ENGYWLATAADDGSVKLWDLRKLKNFKTIQLD 430 (506)
T ss_pred EeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEec-cCceEEEEEecCCeEEEEEehhhcccceeecc
Confidence 45799999999999999999999999999999999999999999999 99999999999999999999998888777644
Q ss_pred c-cceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 83 S-AEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 83 ~-~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
+ .++.++.|.+.|.+++.++.+=.|++++
T Consensus 431 ~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~ 460 (506)
T KOG0289|consen 431 EKKEVNSLSFDQSGTYLGIAGSDLQVYICK 460 (506)
T ss_pred ccccceeEEEcCCCCeEEeecceeEEEEEe
Confidence 3 4789999999999999997776666654
No 68
>KOG1034|consensus
Probab=99.82 E-value=1.9e-19 Score=106.04 Aligned_cols=104 Identities=28% Similarity=0.545 Sum_probs=96.4
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec---ccccce
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR---GHSAEV 86 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~---~~~~~v 86 (113)
..+++.++.-|.|++.|+.+++....+.+|...|..+++.|.+.++++++++|..|++|++++..++..+. +|...|
T Consensus 105 ~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeV 184 (385)
T KOG1034|consen 105 NPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEV 184 (385)
T ss_pred CeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcE
Confidence 34788888999999999999999999999999999999999889999999999999999999999888775 577899
Q ss_pred EEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 87 VGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.++.|+++|.++++++.|..+++|++.
T Consensus 185 LSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 185 LSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred EEEEEcCCCCeeeccCCcceEEEEecC
Confidence 999999999999999999999999874
No 69
>KOG0264|consensus
Probab=99.82 E-value=2.9e-19 Score=108.20 Aligned_cols=109 Identities=28% Similarity=0.411 Sum_probs=93.6
Q ss_pred eEcCCCC-EEEeeecCCeEEEeeCCCCe-------eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC--ccc
Q psy3639 5 RVTSSPQ-RCLTGSYDRTCKLWDIKSGH-------EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA--KEE 74 (113)
Q Consensus 5 ~~~~~~~-~~~~~~~d~~v~i~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~--~~~ 74 (113)
+|++..+ .+++++.|+.|++||+.... +...+.+|...|.+++|+|....+|++.+.|+.+.+||.+ +.+
T Consensus 184 sWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~ 263 (422)
T KOG0264|consen 184 SWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSK 263 (422)
T ss_pred ccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCC
Confidence 4566554 78899999999999986432 3456789999999999998888999999999999999999 556
Q ss_pred cceeecccccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 75 CIQTYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 75 ~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
......+|.+.+++++|+| ++..|++++.|++|.+||+|
T Consensus 264 ~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlR 303 (422)
T KOG0264|consen 264 PSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLR 303 (422)
T ss_pred CcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeech
Confidence 6677788999999999999 56678899999999999986
No 70
>KOG0308|consensus
Probab=99.81 E-value=4e-19 Score=112.07 Aligned_cols=111 Identities=26% Similarity=0.468 Sum_probs=97.1
Q ss_pred CcceE-cCCCCEEEeeecCCeEEEeeCCCCe--eeE--------Eee-CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q psy3639 2 GVPRV-TSSPQRCLTGSYDRTCKLWDIKSGH--EIC--------TYR-GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA 69 (113)
Q Consensus 2 ~~~~~-~~~~~~~~~~~~d~~v~i~~~~~~~--~~~--------~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd 69 (113)
.|.++ .++..++++|+-|+.|.+||+.++. .+. .+. ++..++.+++.+ +.+..+++|+..+.+++||
T Consensus 121 kcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N-~t~t~ivsGgtek~lr~wD 199 (735)
T KOG0308|consen 121 KCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMN-QTGTIIVSGGTEKDLRLWD 199 (735)
T ss_pred eeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecC-CcceEEEecCcccceEEec
Confidence 34455 6678899999999999999998772 222 122 678899999999 7789999999999999999
Q ss_pred CCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 70 SAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 70 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+++.+.+..+.+|...|..+..+++|+.+++++.||+|++||+.
T Consensus 200 prt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg 243 (735)
T KOG0308|consen 200 PRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG 243 (735)
T ss_pred cccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecc
Confidence 99999999999999999999999999999999999999999984
No 71
>KOG0293|consensus
Probab=99.81 E-value=5.2e-19 Score=106.99 Aligned_cols=109 Identities=22% Similarity=0.320 Sum_probs=96.7
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCC---eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSG---HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
+.|+++|+++|+++.|.+.-+|.+... +..+++.+|..+|..+.|+ |+.+++++++.+..+.+||..++.+...+.
T Consensus 230 l~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wS-PDdryLlaCg~~e~~~lwDv~tgd~~~~y~ 308 (519)
T KOG0293|consen 230 LQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWS-PDDRYLLACGFDEVLSLWDVDTGDLRHLYP 308 (519)
T ss_pred EEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEEC-CCCCeEEecCchHheeeccCCcchhhhhcc
Confidence 578999999999999999999987543 4578889999999999999 788999999999999999999999887776
Q ss_pred cc-ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GH-SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~-~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.. .-.+.+.+|.|||..+++|+.|+++..||+.
T Consensus 309 ~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD 342 (519)
T KOG0293|consen 309 SGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD 342 (519)
T ss_pred cCcCCCcceeEEccCCceeEecCCCCcEEEecCC
Confidence 33 4678899999999999999999999999974
No 72
>KOG1445|consensus
Probab=99.81 E-value=8.3e-20 Score=115.66 Aligned_cols=107 Identities=21% Similarity=0.407 Sum_probs=96.7
Q ss_pred EcC-CCCEEEeeecCCeEEEeeCCCC-------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce
Q psy3639 6 VTS-SPQRCLTGSYDRTCKLWDIKSG-------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 6 ~~~-~~~~~~~~~~d~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~ 77 (113)
|+| +.+.++++++||.|++|.+..+ .+...+..|...|+++.|+|-....+++++.|-+|++||+.+.+...
T Consensus 635 WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~ 714 (1012)
T KOG1445|consen 635 WDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYS 714 (1012)
T ss_pred cCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhh
Confidence 444 5679999999999999998654 24567788999999999998888899999999999999999999999
Q ss_pred eecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+.+|...|..++|+|+|+.+++.+.||++++|+-
T Consensus 715 ~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~P 749 (1012)
T KOG1445|consen 715 RLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEP 749 (1012)
T ss_pred eeccCcCceeEEEECCCCcceeeeecCceEEEeCC
Confidence 99999999999999999999999999999999975
No 73
>KOG0296|consensus
Probab=99.81 E-value=2.1e-18 Score=102.71 Aligned_cols=111 Identities=16% Similarity=0.243 Sum_probs=102.2
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.++.|+.++.++++|+-+|.|++|...++.....+......+.=+.|+ |....++.|+.||.+-+|.+.+....+.+.+
T Consensus 110 t~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WH-p~a~illAG~~DGsvWmw~ip~~~~~kv~~G 188 (399)
T KOG0296|consen 110 TCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWH-PRAHILLAGSTDGSVWMWQIPSQALCKVMSG 188 (399)
T ss_pred EEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEec-ccccEEEeecCCCcEEEEECCCcceeeEecC
Confidence 467899999999999999999999999998888887666778889999 6899999999999999999999877899999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|..++.+=.|.|+|+.++++..||+|++||..
T Consensus 189 h~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~k 220 (399)
T KOG0296|consen 189 HNSPCTCGEFIPDGKRILTGYDDGTIIVWNPK 220 (399)
T ss_pred CCCCcccccccCCCceEEEEecCceEEEEecC
Confidence 99999999999999999999999999999973
No 74
>KOG0772|consensus
Probab=99.81 E-value=2.9e-19 Score=110.46 Aligned_cols=111 Identities=21% Similarity=0.432 Sum_probs=89.0
Q ss_pred CcceEcCCC-CEEEeeecCCeEEEeeCCCCe-eeEEee-----CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc
Q psy3639 2 GVPRVTSSP-QRCLTGSYDRTCKLWDIKSGH-EICTYR-----GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE 74 (113)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~d~~v~i~~~~~~~-~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~ 74 (113)
.+-+|+|.. +.+++++.||++|+|++...+ .+++++ +..-+++..+|+ +++..+++|..||.|.+|+.....
T Consensus 272 t~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~n-rdg~~iAagc~DGSIQ~W~~~~~~ 350 (641)
T KOG0772|consen 272 TCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWN-RDGKLIAAGCLDGSIQIWDKGSRT 350 (641)
T ss_pred eccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecC-CCcchhhhcccCCceeeeecCCcc
Confidence 566888865 589999999999999986543 444544 234568899999 889999999999999999975432
Q ss_pred ---cceeeccccc--ceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 75 ---CIQTYRGHSA--EVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 75 ---~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
....-.+|.. .+.++.||++|++|++-+.|+++++||+|
T Consensus 351 v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 351 VRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred cccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence 1233345554 89999999999999999999999999986
No 75
>KOG0274|consensus
Probab=99.80 E-value=2.3e-18 Score=109.60 Aligned_cols=106 Identities=27% Similarity=0.560 Sum_probs=95.2
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
.++...+..+++|+.|.+|++|++.++..+.++.+|..+|.++..+ +..+++|+.|++|++||+.+++++.++.+|.
T Consensus 295 ~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~ 371 (537)
T KOG0274|consen 295 RCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHT 371 (537)
T ss_pred EEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCCc
Confidence 3555666777888899999999999899999998899999999987 7899999999999999999999999999999
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..|.++.+.+. ..+++|+.|++|++||++
T Consensus 372 ~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~ 400 (537)
T KOG0274|consen 372 GRVYSLIVDSE-NRLLSGSLDTTIKVWDLR 400 (537)
T ss_pred ceEEEEEecCc-ceEEeeeeccceEeecCC
Confidence 99999988655 889999999999999985
No 76
>KOG0267|consensus
Probab=99.80 E-value=6.1e-20 Score=116.82 Aligned_cols=110 Identities=31% Similarity=0.514 Sum_probs=102.7
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.++.+++...+++.|+.+|+|++||+++.+.++++.+|..++..+.|+ |.+.++++|+.|+.+.+||++..-+.+.+.+
T Consensus 74 eSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~-P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s 152 (825)
T KOG0267|consen 74 ESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFH-PYGEFFASGSTDTDLKIWDIRKKGCSHTYKS 152 (825)
T ss_pred eeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeec-cceEEeccccccccceehhhhccCceeeecC
Confidence 345677788899999999999999999999999999999999999999 7789999999999999999998888999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
|...+..+.|+|+|++++.+++|..+++||+
T Consensus 153 ~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~ 183 (825)
T KOG0267|consen 153 HTRVVDVLRLSPDGRWVASGGEDNTVKIWDL 183 (825)
T ss_pred CcceeEEEeecCCCceeeccCCcceeeeecc
Confidence 9889999999999999999999999999997
No 77
>KOG0316|consensus
Probab=99.79 E-value=3.1e-18 Score=97.44 Aligned_cols=106 Identities=26% Similarity=0.493 Sum_probs=83.1
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc--ccceeeccc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE--ECIQTYRGH 82 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~--~~~~~~~~~ 82 (113)
+.+.+...+++++.|+.+.+||+.+|+..+.+.+|.+.|..++|+ .....+++|+.|.++++||+++. ++++.+...
T Consensus 66 ~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fN-eesSVv~SgsfD~s~r~wDCRS~s~ePiQildea 144 (307)
T KOG0316|consen 66 ALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFN-EESSVVASGSFDSSVRLWDCRSRSFEPIQILDEA 144 (307)
T ss_pred cccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEec-CcceEEEeccccceeEEEEcccCCCCccchhhhh
Confidence 345667789999999999999999999999999999999999999 77899999999999999998764 344444322
Q ss_pred --------------------------------------ccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 83 --------------------------------------SAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 83 --------------------------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
..+|++++|+++++..+.++.|+++++.|
T Consensus 145 ~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlD 211 (307)
T KOG0316|consen 145 KDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLD 211 (307)
T ss_pred cCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecc
Confidence 34556666666666666666666666554
No 78
>KOG0296|consensus
Probab=99.79 E-value=9.6e-18 Score=99.93 Aligned_cols=109 Identities=17% Similarity=0.271 Sum_probs=98.5
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+++.+|+.+++++|+.|-..++|+..++.....+.+|+..|+++.|+ .++.++++|+.+|.|++|+..++.....+...
T Consensus 69 avsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fs-hdgtlLATGdmsG~v~v~~~stg~~~~~~~~e 147 (399)
T KOG0296|consen 69 AVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFS-HDGTLLATGDMSGKVLVFKVSTGGEQWKLDQE 147 (399)
T ss_pred EEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEc-cCceEEEecCCCccEEEEEcccCceEEEeecc
Confidence 35678888999999999999999999999999999999999999999 89999999999999999999999877777644
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...+.=+.|+|.+..|+.|+.||.+.+|.+
T Consensus 148 ~~dieWl~WHp~a~illAG~~DGsvWmw~i 177 (399)
T KOG0296|consen 148 VEDIEWLKWHPRAHILLAGSTDGSVWMWQI 177 (399)
T ss_pred cCceEEEEecccccEEEeecCCCcEEEEEC
Confidence 455666899999999999999999999976
No 79
>KOG0292|consensus
Probab=99.79 E-value=6.9e-19 Score=114.52 Aligned_cols=109 Identities=28% Similarity=0.369 Sum_probs=104.2
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
-.+|+|....++++-.+|.|.+||.+=+.++..|..|.++|..++|+ +...++++|+.|.+|++|+.++.+++.++.+|
T Consensus 14 glsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH-~~qplFVSGGDDykIkVWnYk~rrclftL~GH 92 (1202)
T KOG0292|consen 14 GLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFH-PTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGH 92 (1202)
T ss_pred ceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeec-CCCCeEEecCCccEEEEEecccceehhhhccc
Confidence 35789999999999999999999999999999999999999999999 77899999999999999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
-..|..+.|++.-.++++++.|.+|+||+.
T Consensus 93 lDYVRt~~FHheyPWIlSASDDQTIrIWNw 122 (1202)
T KOG0292|consen 93 LDYVRTVFFHHEYPWILSASDDQTIRIWNW 122 (1202)
T ss_pred cceeEEeeccCCCceEEEccCCCeEEEEec
Confidence 999999999999999999999999999985
No 80
>KOG0274|consensus
Probab=99.79 E-value=9.7e-18 Score=106.83 Aligned_cols=104 Identities=26% Similarity=0.506 Sum_probs=94.8
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccccc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSA 84 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~ 84 (113)
++..-+..+++|+.|.++++||..++++...+.+|...+.++... +..+++|+.|.+|++|++.++..+..+.+|..
T Consensus 256 ~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~ 332 (537)
T KOG0274|consen 256 AFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID---PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTG 332 (537)
T ss_pred EEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc---CceEeeccCCceEEEEeccCcceEEEeccccc
Confidence 344447899999999999999999999999999999999999876 57788899999999999999999999999999
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|+++..+ +..+++++.|++|++||.+
T Consensus 333 ~V~~v~~~--~~~lvsgs~d~~v~VW~~~ 359 (537)
T KOG0274|consen 333 PVNCVQLD--EPLLVSGSYDGTVKVWDPR 359 (537)
T ss_pred cEEEEEec--CCEEEEEecCceEEEEEhh
Confidence 99999996 8899999999999999963
No 81
>KOG1332|consensus
Probab=99.79 E-value=4.3e-18 Score=97.13 Aligned_cols=107 Identities=21% Similarity=0.366 Sum_probs=91.8
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCC---eeeEEeeCCCCeEEEEEE-cCCCCCEEEEEeCCCcEEEEeCCccc--cceee
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSG---HEICTYRGHQNVVYAVAF-SEPYGDKILTGSFDKTLKLWASAKEE--CIQTY 79 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~v~~wd~~~~~--~~~~~ 79 (113)
++..|++|++++.|++|+|+..+.. ..+.++.+|.+|+..++| +|..|.++++++.||.|.+|.-..++ ....+
T Consensus 19 lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~ 98 (299)
T KOG1332|consen 19 LDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEH 98 (299)
T ss_pred hhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhh
Confidence 4556889999999999999998754 467899999999999999 55679999999999999999987763 45666
Q ss_pred cccccceEEEEEcc--CCCEEEEeecCCcEEEeec
Q psy3639 80 RGHSAEVVGVTFSP--DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 80 ~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~~~~ 112 (113)
..|...|++++|.| -|-.|++++.||.|.+++.
T Consensus 99 ~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~ 133 (299)
T KOG1332|consen 99 AAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTY 133 (299)
T ss_pred hhhcccceeecccccccceEEEEeeCCCcEEEEEE
Confidence 77899999999998 4567899999999999875
No 82
>KOG1274|consensus
Probab=99.79 E-value=6.7e-18 Score=109.72 Aligned_cols=112 Identities=20% Similarity=0.335 Sum_probs=95.7
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee-
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY- 79 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~- 79 (113)
+.+++++-+|++++.|++|-.|++-+..+......+++|.++|.++.++ |++.++++.+-||.|++||+.++....++
T Consensus 99 ~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~-p~~~fLAvss~dG~v~iw~~~~~~~~~tl~ 177 (933)
T KOG1274|consen 99 IRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYD-PKGNFLAVSSCDGKVQIWDLQDGILSKTLT 177 (933)
T ss_pred ceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEc-CCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence 4678899999999999999999999999999999999999999999999 88999999999999999997655331111
Q ss_pred ---------------------------------------------------cccccceEEEEEccCCCEEEEeecCCcEE
Q psy3639 80 ---------------------------------------------------RGHSAEVVGVTFSPDQSTFCSCSMDHTAR 108 (113)
Q Consensus 80 ---------------------------------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~i~ 108 (113)
+.+...+..++|+|+|.|+++++.+|.|.
T Consensus 178 ~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~ 257 (933)
T KOG1274|consen 178 GVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQIL 257 (933)
T ss_pred cCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEE
Confidence 11234478899999999999999999999
Q ss_pred EeecC
Q psy3639 109 IFNTM 113 (113)
Q Consensus 109 ~~~~~ 113 (113)
|||++
T Consensus 258 vWnv~ 262 (933)
T KOG1274|consen 258 VWNVD 262 (933)
T ss_pred EEecc
Confidence 99874
No 83
>KOG0643|consensus
Probab=99.79 E-value=1.9e-17 Score=95.58 Aligned_cols=77 Identities=23% Similarity=0.395 Sum_probs=69.9
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
.-+.++.+|.+|.+++.|....+|-...|+.+.++.+|++.|.+++.. .....+++|+.|.++++||+++++.+.++
T Consensus 14 TqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did-~~s~~liTGSAD~t~kLWDv~tGk~la~~ 90 (327)
T KOG0643|consen 14 TQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDID-WDSKHLITGSADQTAKLWDVETGKQLATW 90 (327)
T ss_pred ceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEec-CCcceeeeccccceeEEEEcCCCcEEEEe
Confidence 345788999999999999999999988899999999999999999998 78899999999999999999888765554
No 84
>KOG0281|consensus
Probab=99.79 E-value=6.7e-19 Score=104.91 Aligned_cols=106 Identities=25% Similarity=0.446 Sum_probs=96.5
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+-|+--++..+++|..|.+|++||..+-.++..+.+|++.|.|+.+. .+.+++|+.|.+|++||.++++++.++-.|
T Consensus 200 VYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd---~rviisGSSDsTvrvWDv~tge~l~tlihH 276 (499)
T KOG0281|consen 200 VYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD---ERVIVSGSSDSTVRVWDVNTGEPLNTLIHH 276 (499)
T ss_pred eEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc---ceEEEecCCCceEEEEeccCCchhhHHhhh
Confidence 34556677889999999999999999999999999999999999987 569999999999999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
...|..+.|+ ..++++++.|.++.+||+.
T Consensus 277 ceaVLhlrf~--ng~mvtcSkDrsiaVWdm~ 305 (499)
T KOG0281|consen 277 CEAVLHLRFS--NGYMVTCSKDRSIAVWDMA 305 (499)
T ss_pred cceeEEEEEe--CCEEEEecCCceeEEEecc
Confidence 9999999996 5689999999999999973
No 85
>KOG0313|consensus
Probab=99.78 E-value=2.9e-18 Score=102.58 Aligned_cols=105 Identities=25% Similarity=0.472 Sum_probs=90.5
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc---cceeeccc
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE---CIQTYRGH 82 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~---~~~~~~~~ 82 (113)
|++ ...+++++.|.+|+.||+.++....++. ......++..+ +...++++|+.|..+++||++++. ..+++.+|
T Consensus 268 w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~-~~ksl~~i~~~-~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH 344 (423)
T KOG0313|consen 268 WSD-ATVIYSVSWDHTIKVWDLETGGLKSTLT-TNKSLNCISYS-PLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGH 344 (423)
T ss_pred EcC-CCceEeecccceEEEEEeecccceeeee-cCcceeEeecc-cccceeeecCCCCceeecCCCCCCCceeEEeeecc
Confidence 444 5678899999999999999999888877 55678999999 678999999999999999998752 45678899
Q ss_pred ccceEEEEEccCC-CEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPDQ-STFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 113 (113)
...|.++.|+|.. ..|++++.|+++++||+|
T Consensus 345 ~nwVssvkwsp~~~~~~~S~S~D~t~klWDvR 376 (423)
T KOG0313|consen 345 KNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVR 376 (423)
T ss_pred hhhhhheecCCCCceEEEEEecCCeEEEEEec
Confidence 9999999999954 567899999999999986
No 86
>KOG0305|consensus
Probab=99.78 E-value=2.2e-18 Score=107.46 Aligned_cols=108 Identities=24% Similarity=0.402 Sum_probs=99.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeC-CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccccee-e
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRG-HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQT-Y 79 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~-~ 79 (113)
+.+.++++|.+|++|..+|.|.|||..+.+.+..+.+ |...|.+++|+ ...+.+|+.++.|..+|++..+.... +
T Consensus 221 tSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~ 297 (484)
T KOG0305|consen 221 TSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTL 297 (484)
T ss_pred EEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhh
Confidence 3467899999999999999999999999999999988 99999999998 68889999999999999998765554 8
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+|.+.|+.++|+++++++++|+.|+.+.|||.
T Consensus 298 ~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~ 330 (484)
T KOG0305|consen 298 QGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDG 330 (484)
T ss_pred hcccceeeeeEECCCCCeeccCCCccceEeccC
Confidence 889999999999999999999999999999996
No 87
>KOG0293|consensus
Probab=99.78 E-value=1.1e-18 Score=105.63 Aligned_cols=109 Identities=26% Similarity=0.437 Sum_probs=94.2
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCe--EEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNV--VYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.+++.+++++++.-.+..+.+||++..+.+..+.+|+.. +-.-+|--.+..++++|++|+.|++|+..+++.+..+.+
T Consensus 401 ~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsG 480 (519)
T KOG0293|consen 401 FSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSG 480 (519)
T ss_pred EEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecC
Confidence 356788999999999999999999988888888888654 444445434457899999999999999999999999999
Q ss_pred cccceEEEEEcc-CCCEEEEeecCCcEEEeec
Q psy3639 82 HSAEVVGVTFSP-DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 82 ~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~ 112 (113)
|...|++++|+| +...+++++.||+|+||..
T Consensus 481 Hs~~vNcVswNP~~p~m~ASasDDgtIRIWg~ 512 (519)
T KOG0293|consen 481 HSKTVNCVSWNPADPEMFASASDDGTIRIWGP 512 (519)
T ss_pred CcceeeEEecCCCCHHHhhccCCCCeEEEecC
Confidence 999999999999 6778899999999999964
No 88
>KOG0640|consensus
Probab=99.78 E-value=3.5e-18 Score=100.58 Aligned_cols=110 Identities=21% Similarity=0.401 Sum_probs=93.6
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee--CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccccee
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR--GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQT 78 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~ 78 (113)
++...|+|...+|++++.|++|++||+......+.++ ....++.++.|+ |.|.+++.|..-..+++||+.+.++...
T Consensus 175 vn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfH-PsGefllvgTdHp~~rlYdv~T~Qcfvs 253 (430)
T KOG0640|consen 175 VNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFH-PSGEFLLVGTDHPTLRLYDVNTYQCFVS 253 (430)
T ss_pred ccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeec-CCCceEEEecCCCceeEEeccceeEeee
Confidence 4567899999999999999999999986543322222 256789999999 7899999999999999999999887655
Q ss_pred ec---ccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 79 YR---GHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 79 ~~---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.. .|.+.|.++.+++.|+..++++.||.|++||
T Consensus 254 anPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwD 289 (430)
T KOG0640|consen 254 ANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWD 289 (430)
T ss_pred cCcccccccceeEEEecCCccEEEEeccCCcEEeec
Confidence 43 4678999999999999999999999999998
No 89
>KOG0640|consensus
Probab=99.78 E-value=7.7e-18 Score=99.16 Aligned_cols=110 Identities=23% Similarity=0.387 Sum_probs=97.5
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEE---eeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccccee
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICT---YRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQT 78 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~ 78 (113)
.+..|+|.|++++.|.+-..+++||+.+.++... -.+|++.|+++..+ +.+.+.++++.||.|++||-.+.+++.+
T Consensus 220 rsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys-~t~~lYvTaSkDG~IklwDGVS~rCv~t 298 (430)
T KOG0640|consen 220 RSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYS-STGSLYVTASKDGAIKLWDGVSNRCVRT 298 (430)
T ss_pred eeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEec-CCccEEEEeccCCcEEeeccccHHHHHH
Confidence 4567899999999999999999999998775433 24689999999999 8899999999999999999999999988
Q ss_pred ec-cc-ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 79 YR-GH-SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 79 ~~-~~-~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+. .| ...|.+..|..+|+++++.+.|..+++|.+
T Consensus 299 ~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi 334 (430)
T KOG0640|consen 299 IGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEI 334 (430)
T ss_pred HHhhcCCceeeeEEEccCCeEEeecCCcceeeeeee
Confidence 86 34 457899999999999999999999999986
No 90
>KOG0308|consensus
Probab=99.78 E-value=8.3e-18 Score=106.27 Aligned_cols=109 Identities=23% Similarity=0.405 Sum_probs=101.4
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
.+.++++..++.|+-.+-+++||.++++.+-.+++|+..|..+..+ ++|..+++++.||+|++||+...+++.++..|+
T Consensus 177 LA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~-dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~ 255 (735)
T KOG0308|consen 177 LAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVN-DDGTRLLSASSDGTIRLWDLGQQRCLATYIVHK 255 (735)
T ss_pred eecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEc-CCCCeEeecCCCceEEeeeccccceeeeEEecc
Confidence 3556777799999999999999999999998999999999999999 899999999999999999999999999999999
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..|++++.+|+-.++.+|+.||.|..-|++
T Consensus 256 e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~ 285 (735)
T KOG0308|consen 256 EGVWALQSSPSFTHVYSGGRDGNIYRTDLR 285 (735)
T ss_pred CceEEEeeCCCcceEEecCCCCcEEecccC
Confidence 999999999999999999999999887764
No 91
>KOG0269|consensus
Probab=99.78 E-value=9.1e-19 Score=112.12 Aligned_cols=105 Identities=20% Similarity=0.361 Sum_probs=96.4
Q ss_pred CCCEEEeeecCCeEEEeeCCC---CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccc
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKS---GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE 85 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~ 85 (113)
..+++++++.+|.|.+||+.. .+.+..+..|...+.++.|++....++++|+.||.|++||++..+...++.+....
T Consensus 99 ~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSES 178 (839)
T KOG0269|consen 99 YSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSES 178 (839)
T ss_pred hhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchh
Confidence 356899999999999999976 45677888999999999999888899999999999999999999999999988889
Q ss_pred eEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 86 VVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 86 v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
|..++|+| .+..|+++.+.|.+.+||+|
T Consensus 179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlR 207 (839)
T KOG0269|consen 179 IRDVKFSPGYGNKFASIHDSGYLQLWDLR 207 (839)
T ss_pred hhceeeccCCCceEEEecCCceEEEeecc
Confidence 99999999 78899999999999999986
No 92
>KOG1407|consensus
Probab=99.77 E-value=9e-18 Score=96.56 Aligned_cols=110 Identities=21% Similarity=0.408 Sum_probs=96.1
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeE--EeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEIC--TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
-++|+.+|..+++|+.|+++.+|++...+... ...+|...|-.++|.|+.+..+++++.|..|++||++++++.....
T Consensus 25 Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~ 104 (313)
T KOG1407|consen 25 SVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIE 104 (313)
T ss_pred EEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEee
Confidence 36788999999999999999999998765433 4567999999999999999999999999999999999999988887
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
...+.+ .+.|+|+|.++++++.|..|.+.|.+
T Consensus 105 ~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r 136 (313)
T KOG1407|consen 105 TKGENI-NITWSPDGEYIAVGNKDDRITFIDAR 136 (313)
T ss_pred ccCcce-EEEEcCCCCEEEEecCcccEEEEEec
Confidence 555554 58999999999999999999998864
No 93
>KOG0643|consensus
Probab=99.77 E-value=6.5e-18 Score=97.46 Aligned_cols=109 Identities=24% Similarity=0.355 Sum_probs=93.4
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCe-eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee--
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGH-EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY-- 79 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~-- 79 (113)
..-|.|.++.+++|.+||.|..||+++++ .+...+.|...|+++.++ ++..++++++.|.+.++||..+.+.+.++
T Consensus 152 ~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s-~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t 230 (327)
T KOG0643|consen 152 SALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFS-RDRTYFITGSKDTTAKLVDVRTLEVLKTYTT 230 (327)
T ss_pred eeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhcccccccccc-CCcceEEecccCccceeeeccceeeEEEeee
Confidence 34588999999999999999999999985 455557799999999999 88999999999999999997654433322
Q ss_pred -----------------------------------------------------cccccceEEEEEccCCCEEEEeecCCc
Q psy3639 80 -----------------------------------------------------RGHSAEVVGVTFSPDQSTFCSCSMDHT 106 (113)
Q Consensus 80 -----------------------------------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~ 106 (113)
++|-+++++++|+|+|...++|++||.
T Consensus 231 e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~ 310 (327)
T KOG0643|consen 231 ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGY 310 (327)
T ss_pred cccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCce
Confidence 568899999999999999999999999
Q ss_pred EEEeec
Q psy3639 107 ARIFNT 112 (113)
Q Consensus 107 i~~~~~ 112 (113)
|++...
T Consensus 311 VR~h~F 316 (327)
T KOG0643|consen 311 VRLHHF 316 (327)
T ss_pred EEEEEe
Confidence 998753
No 94
>KOG1446|consensus
Probab=99.77 E-value=4.4e-17 Score=95.40 Aligned_cols=111 Identities=23% Similarity=0.373 Sum_probs=98.1
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC--CCcEEEEeCCccccceee
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF--DKTLKLWASAKEECIQTY 79 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~v~~wd~~~~~~~~~~ 79 (113)
....++++|..++++++|-.+++||..+++.+.++..+...+..++|..+ ...+..++. |.+|+.-++.+.+.++.+
T Consensus 18 ~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~-~~~~i~sStk~d~tIryLsl~dNkylRYF 96 (311)
T KOG1446|consen 18 NSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHH-SNTVIHSSTKEDDTIRYLSLHDNKYLRYF 96 (311)
T ss_pred eEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecC-CceEEEccCCCCCceEEEEeecCceEEEc
Confidence 34678999999999999999999999999999999888888888888734 444444444 789999999999999999
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+|...|.+++.+|-++.+++++.|++|++||+|
T Consensus 97 ~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR 130 (311)
T KOG1446|consen 97 PGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLR 130 (311)
T ss_pred CCCCceEEEEEecCCCCeEEecccCCeEEeeEec
Confidence 9999999999999988999999999999999986
No 95
>KOG0646|consensus
Probab=99.77 E-value=3.3e-17 Score=100.04 Aligned_cols=112 Identities=18% Similarity=0.310 Sum_probs=92.3
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCC---------CCeeeEEeeCCCCeEEEEEEcCC-CCCEEEEEeCCCcEEEEeC
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIK---------SGHEICTYRGHQNVVYAVAFSEP-YGDKILTGSFDKTLKLWAS 70 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~---------~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~v~~wd~ 70 (113)
+.|..|+-++.++++|+.||.|.+|.+. +-++++.+..|+-+|+++.+.+. ....+++++.|.++++||+
T Consensus 126 ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdl 205 (476)
T KOG0646|consen 126 ITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDL 205 (476)
T ss_pred eeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEe
Confidence 4577899999999999999999999863 23577888999999999999743 3468999999999999996
Q ss_pred Cccccce---------------------------------------------------------eeccccc--ceEEEEE
Q psy3639 71 AKEECIQ---------------------------------------------------------TYRGHSA--EVVGVTF 91 (113)
Q Consensus 71 ~~~~~~~---------------------------------------------------------~~~~~~~--~v~~~~~ 91 (113)
..+..+. .+.+|.. .|.++++
T Consensus 206 S~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLai 285 (476)
T KOG0646|consen 206 SLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAI 285 (476)
T ss_pred ccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEE
Confidence 5543322 1234554 8999999
Q ss_pred ccCCCEEEEeecCCcEEEeec
Q psy3639 92 SPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 92 ~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+.||..|++|+.||.+.+||+
T Consensus 286 s~DgtlLlSGd~dg~VcvWdi 306 (476)
T KOG0646|consen 286 STDGTLLLSGDEDGKVCVWDI 306 (476)
T ss_pred ecCccEEEeeCCCCCEEEEec
Confidence 999999999999999999996
No 96
>KOG0306|consensus
Probab=99.77 E-value=1.4e-17 Score=106.78 Aligned_cols=109 Identities=24% Similarity=0.423 Sum_probs=103.9
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
|+.++|++++++++--|.++++|-+++-+..-.+.+|.-||.++.++ ++...+++|+.|..|++|-++-|.|-.++-+|
T Consensus 513 ~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS-~DSklivTgSADKnVKiWGLdFGDCHKS~fAH 591 (888)
T KOG0306|consen 513 CVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDIS-PDSKLIVTGSADKNVKIWGLDFGDCHKSFFAH 591 (888)
T ss_pred EEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEecc-CCcCeEEeccCCCceEEeccccchhhhhhhcc
Confidence 56789999999999999999999999999888999999999999999 88999999999999999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...|.++.|-|....+++++.|+.++.||-
T Consensus 592 dDSvm~V~F~P~~~~FFt~gKD~kvKqWDg 621 (888)
T KOG0306|consen 592 DDSVMSVQFLPKTHLFFTCGKDGKVKQWDG 621 (888)
T ss_pred cCceeEEEEcccceeEEEecCcceEEeech
Confidence 999999999999999999999999999974
No 97
>KOG1273|consensus
Probab=99.77 E-value=1.1e-17 Score=98.56 Aligned_cols=101 Identities=19% Similarity=0.275 Sum_probs=88.7
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.++.|++.|.++++|..||.|.+||+.|...-..+..|..+|++++|+ ++|+.+++++.|..+.+||+..+.+++.+.
T Consensus 27 ~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS-~dgr~LltsS~D~si~lwDl~~gs~l~rir- 104 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWS-RDGRKLLTSSRDWSIKLWDLLKGSPLKRIR- 104 (405)
T ss_pred ceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEec-CCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence 468899999999999999999999999998888899999999999999 899999999999999999999999888877
Q ss_pred cccceEEEEEccCCC-EEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQS-TFCSCSMD 104 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~-~~~~~~~~ 104 (113)
..++|+..+|+|..+ .+++.-.+
T Consensus 105 f~spv~~~q~hp~k~n~~va~~~~ 128 (405)
T KOG1273|consen 105 FDSPVWGAQWHPRKRNKCVATIME 128 (405)
T ss_pred ccCccceeeeccccCCeEEEEEec
Confidence 678999999999443 33333333
No 98
>KOG0641|consensus
Probab=99.77 E-value=2.9e-17 Score=93.35 Aligned_cols=107 Identities=27% Similarity=0.443 Sum_probs=96.6
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeC--C-----CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccccee
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRG--H-----QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQT 78 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~--~-----~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~ 78 (113)
+++++-++++|++|.+|++||++-..++.++.. | ...|..++.. |.++++++|-.|....+||++.++.++.
T Consensus 190 yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vd-psgrll~sg~~dssc~lydirg~r~iq~ 268 (350)
T KOG0641|consen 190 YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVD-PSGRLLASGHADSSCMLYDIRGGRMIQR 268 (350)
T ss_pred EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEEC-CCcceeeeccCCCceEEEEeeCCceeee
Confidence 577889999999999999999998888877642 2 2568889998 7899999999999999999999999999
Q ss_pred ecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 79 YRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+..|...|.++.|+|...++++++.|..|++-|+.
T Consensus 269 f~phsadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 269 FHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred eCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 99999999999999999999999999999998873
No 99
>KOG1446|consensus
Probab=99.77 E-value=5.4e-17 Score=95.02 Aligned_cols=108 Identities=19% Similarity=0.388 Sum_probs=92.8
Q ss_pred cceEcCCCCEEEeeec--CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 3 VPRVTSSPQRCLTGSY--DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
..+|....+.++.++. |.+|+.-++.+.+.++.+.||...|..++.+ |.+..+++++.|++|++||++..++...+.
T Consensus 61 ~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~s-P~~d~FlS~S~D~tvrLWDlR~~~cqg~l~ 139 (311)
T KOG1446|consen 61 LACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVS-PKDDTFLSSSLDKTVRLWDLRVKKCQGLLN 139 (311)
T ss_pred EEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEec-CCCCeEEecccCCeEEeeEecCCCCceEEe
Confidence 4566666776666655 8899999999999999999999999999999 556999999999999999999888777776
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
....++ .+|+|+|-+++++...+.|++||+|
T Consensus 140 ~~~~pi--~AfDp~GLifA~~~~~~~IkLyD~R 170 (311)
T KOG1446|consen 140 LSGRPI--AAFDPEGLIFALANGSELIKLYDLR 170 (311)
T ss_pred cCCCcc--eeECCCCcEEEEecCCCeEEEEEec
Confidence 544444 6899999999999998899999986
No 100
>KOG0300|consensus
Probab=99.77 E-value=4.2e-18 Score=100.68 Aligned_cols=109 Identities=27% Similarity=0.500 Sum_probs=97.4
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceeecc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTYRG 81 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~~~ 81 (113)
++.|-..++.+++++.|.+..+||+++++.+..+.+|....+..+-+ |..+++++.+.|-+.++||++.. ..+..+++
T Consensus 277 a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstH-ptQrLVvTsSrDtTFRLWDFReaI~sV~VFQG 355 (481)
T KOG0300|consen 277 ACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTH-PTQRLVVTSSRDTTFRLWDFREAIQSVAVFQG 355 (481)
T ss_pred ehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccC-CcceEEEEeccCceeEeccchhhcceeeeecc
Confidence 34566678899999999999999999999999999999999998888 77889999999999999999854 56788999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|...|.+..|..+. .+++++.|.++++||++
T Consensus 356 HtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLr 386 (481)
T KOG0300|consen 356 HTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLR 386 (481)
T ss_pred cccceeEEEEecCC-ceeecCCCceEEEeeec
Confidence 99999999998754 58899999999999985
No 101
>KOG0306|consensus
Probab=99.76 E-value=5.9e-18 Score=108.44 Aligned_cols=109 Identities=28% Similarity=0.444 Sum_probs=102.3
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+..++|+++++++|+.|+.|++|=+.=|.+-..+..|...|.++.|. |....+.+++.|+.++.||-..-+.++.+.+|
T Consensus 555 smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~-P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H 633 (888)
T KOG0306|consen 555 SMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFL-PKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGH 633 (888)
T ss_pred EEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEc-ccceeEEEecCcceEEeechhhhhhheeeccc
Confidence 45679999999999999999999998888888888999999999999 67889999999999999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...|++++.+|+|.++++++.|..|++|..
T Consensus 634 ~~ev~cLav~~~G~~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 634 HSEVWCLAVSPNGSFVVSSSHDKSIRLWER 663 (888)
T ss_pred hheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence 999999999999999999999999999963
No 102
>KOG0299|consensus
Probab=99.75 E-value=1.1e-17 Score=102.02 Aligned_cols=109 Identities=23% Similarity=0.444 Sum_probs=95.8
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+++++++++++++|+.|..|.||+..+.++++.+.+|...|.+++|. .....+++++.|+.+++|++.....+.++.+|
T Consensus 207 ~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr-~gt~~lys~s~Drsvkvw~~~~~s~vetlyGH 285 (479)
T KOG0299|consen 207 TLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFR-KGTSELYSASADRSVKVWSIDQLSYVETLYGH 285 (479)
T ss_pred EEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeee-cCccceeeeecCCceEEEehhHhHHHHHHhCC
Confidence 46889999999999999999999999999999999999999999998 77888999999999999999888888888888
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...|..+.-....+.+-+++.|+++++|++
T Consensus 286 qd~v~~IdaL~reR~vtVGgrDrT~rlwKi 315 (479)
T KOG0299|consen 286 QDGVLGIDALSRERCVTVGGRDRTVRLWKI 315 (479)
T ss_pred ccceeeechhcccceEEeccccceeEEEec
Confidence 888877776666666666667888888865
No 103
>KOG0639|consensus
Probab=99.75 E-value=6.7e-18 Score=104.58 Aligned_cols=111 Identities=16% Similarity=0.348 Sum_probs=96.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCee--eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHE--ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
.-+.+.|+++.|++|++-.++.|||+....+ ...+......+..++.+ ++.+..+++..||.|.+||+.+...++.+
T Consensus 469 RSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~s-pDakvcFsccsdGnI~vwDLhnq~~Vrqf 547 (705)
T KOG0639|consen 469 RSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS-PDAKVCFSCCSDGNIAVWDLHNQTLVRQF 547 (705)
T ss_pred eeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcC-CccceeeeeccCCcEEEEEcccceeeecc
Confidence 3467899999999999999999999875432 23334344567888999 78889999999999999999999999999
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
++|...+.++..+++|..|++|+-|++++-||+|
T Consensus 548 qGhtDGascIdis~dGtklWTGGlDntvRcWDlr 581 (705)
T KOG0639|consen 548 QGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLR 581 (705)
T ss_pred cCCCCCceeEEecCCCceeecCCCccceeehhhh
Confidence 9999999999999999999999999999999985
No 104
>KOG0302|consensus
Probab=99.74 E-value=1.1e-17 Score=100.14 Aligned_cols=109 Identities=18% Similarity=0.356 Sum_probs=90.0
Q ss_pred ceEcCCCC-EEEeeecCCeEEEeeCCCCe---eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc---cc
Q psy3639 4 PRVTSSPQ-RCLTGSYDRTCKLWDIKSGH---EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE---CI 76 (113)
Q Consensus 4 ~~~~~~~~-~~~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~---~~ 76 (113)
.+|+|--. .+++|.--+.|++|...++. -...+.+|+..|-.+.|+|.....|++++-||+|++||++.+. ++
T Consensus 217 LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~ 296 (440)
T KOG0302|consen 217 LDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAV 296 (440)
T ss_pred eecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcccee
Confidence 35666333 47788888889999988764 1234567999999999998888899999999999999999873 33
Q ss_pred eeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.. +.|.+.|+-++|+..-.+|++|+.||+++|||+|
T Consensus 297 ~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR 332 (440)
T KOG0302|consen 297 ST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLR 332 (440)
T ss_pred Ee-eccCCceeeEEccCCcceeeecCCCceEEEEEhh
Confidence 33 7788999999999877799999999999999986
No 105
>KOG0646|consensus
Probab=99.74 E-value=3.2e-17 Score=100.08 Aligned_cols=109 Identities=18% Similarity=0.364 Sum_probs=96.4
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC---------cc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA---------KE 73 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~---------~~ 73 (113)
+.+-+|+|.+++.|+..+.+++|.+.+|..+..+..|=..|+++.|+ .++..+++++.||.|.+|++. +-
T Consensus 86 al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs-~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~ 164 (476)
T KOG0646|consen 86 ALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFS-DDGSHIITGSKDGAVLVWLLTDLVSADNDHSV 164 (476)
T ss_pred eeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEe-CCCcEEEecCCCccEEEEEEEeecccccCCCc
Confidence 45567889999999899999999999999999999999999999999 999999999999999999752 23
Q ss_pred ccceeecccccceEEEEEccC--CCEEEEeecCCcEEEeec
Q psy3639 74 ECIQTYRGHSAEVVGVTFSPD--QSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 74 ~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~~~~~ 112 (113)
+++..+..|.-+|.++...+. ..++++++.|+++++||+
T Consensus 165 ~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdl 205 (476)
T KOG0646|consen 165 KPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDL 205 (476)
T ss_pred cceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEe
Confidence 567888899999999887653 457999999999999997
No 106
>KOG1036|consensus
Probab=99.74 E-value=9.8e-17 Score=93.84 Aligned_cols=107 Identities=18% Similarity=0.314 Sum_probs=93.1
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
-+.|+|..+.|++++.||.+++|+....+....++ |..++.+.+|. + ...+++|+.||.|+.+|+.+++. ..+..|
T Consensus 18 ~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~-d-~~~~~~G~~dg~vr~~Dln~~~~-~~igth 93 (323)
T KOG1036|consen 18 SVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFA-D-ESTIVTGGLDGQVRRYDLNTGNE-DQIGTH 93 (323)
T ss_pred eEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeecc-C-CceEEEeccCceEEEEEecCCcc-eeeccC
Confidence 35678888899999999999999999887666666 99999999997 3 57789999999999999988874 455558
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..++.++.+++....+++|+.|++|++||.|
T Consensus 94 ~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R 124 (323)
T KOG1036|consen 94 DEGIRCIEYSYEVGCVISGSWDKTIKFWDPR 124 (323)
T ss_pred CCceEEEEeeccCCeEEEcccCccEEEEecc
Confidence 8999999999988889999999999999975
No 107
>KOG0294|consensus
Probab=99.74 E-value=1.4e-16 Score=93.66 Aligned_cols=111 Identities=17% Similarity=0.321 Sum_probs=89.6
Q ss_pred CcceEcCCCC--EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-----
Q psy3639 2 GVPRVTSSPQ--RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE----- 74 (113)
Q Consensus 2 ~~~~~~~~~~--~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~----- 74 (113)
+++.|.+.-. .|++|++||.|.+|+...-..+..++.|...|+.++++ |.+.+..+.+.|+.+++||+..++
T Consensus 87 taL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiH-PS~KLALsVg~D~~lr~WNLV~Gr~a~v~ 165 (362)
T KOG0294|consen 87 TALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIH-PSGKLALSVGGDQVLRTWNLVRGRVAFVL 165 (362)
T ss_pred EEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEec-CCCceEEEEcCCceeeeehhhcCccceee
Confidence 3445555543 89999999999999999999999999999999999999 678888888899999999853332
Q ss_pred ---------------------------------------------------------------------------cceee
Q psy3639 75 ---------------------------------------------------------------------------CIQTY 79 (113)
Q Consensus 75 ---------------------------------------------------------------------------~~~~~ 79 (113)
++..+
T Consensus 166 ~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~ 245 (362)
T KOG0294|consen 166 NLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEF 245 (362)
T ss_pred ccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCccceee
Confidence 12223
Q ss_pred cccccceEEEEE--ccCCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTF--SPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+|+.+|..+.+ .|++.++++++.||.|++||++
T Consensus 246 ~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~ 281 (362)
T KOG0294|consen 246 LAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDID 281 (362)
T ss_pred ecchhheeeeEEEecCCceEEEEeccCceEEEEEcc
Confidence 457778887774 5678899999999999999974
No 108
>KOG4283|consensus
Probab=99.73 E-value=4.6e-17 Score=95.32 Aligned_cols=103 Identities=30% Similarity=0.485 Sum_probs=90.4
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccc------------
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECI------------ 76 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~------------ 76 (113)
..++++|..+-.|++=|+.+|...+++.+|...|.++.|+|...-.+++|+.||.|++||++.. -++
T Consensus 158 HcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p 237 (397)
T KOG4283|consen 158 HCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPP 237 (397)
T ss_pred ceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCc
Confidence 4578899999999999999999999999999999999999887788999999999999998653 122
Q ss_pred --eeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 77 --QTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 77 --~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.....|.+.++.++|+.++.++++++.|..+++|+.
T Consensus 238 ~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~ 275 (397)
T KOG4283|consen 238 ILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM 275 (397)
T ss_pred cccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence 223456788999999999999999999999999986
No 109
>KOG0267|consensus
Probab=99.73 E-value=9.4e-18 Score=107.09 Aligned_cols=109 Identities=26% Similarity=0.438 Sum_probs=103.0
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
+.|+|-+.+++.|+.|.-+++||.+...+.+.+.+|...+..++|+ |+|.+++.+++|..+++||...++....|+.|+
T Consensus 118 v~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~ls-P~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e 196 (825)
T KOG0267|consen 118 VDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLS-PDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHE 196 (825)
T ss_pred eeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeec-CCCceeeccCCcceeeeeccccccccccccccc
Confidence 4588999999999999999999999888999999999999999999 889999999999999999999999999999999
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.+..+.|+|..-.+++|+.|+++++||++
T Consensus 197 ~~v~sle~hp~e~Lla~Gs~d~tv~f~dle 226 (825)
T KOG0267|consen 197 GKVQSLEFHPLEVLLAPGSSDRTVRFWDLE 226 (825)
T ss_pred ccccccccCchhhhhccCCCCceeeeeccc
Confidence 999999999988889999999999999985
No 110
>KOG0270|consensus
Probab=99.73 E-value=1.6e-16 Score=96.64 Aligned_cols=102 Identities=25% Similarity=0.407 Sum_probs=87.7
Q ss_pred CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-cceeecccccceEEE
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE-CIQTYRGHSAEVVGV 89 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~-~~~~~~~~~~~v~~~ 89 (113)
+.|++|+.|.+|.+||+.++++...+..|..+|.++.|+|..+..+++|+.|+++.+.|++... .-...+ ..+.|-.+
T Consensus 257 nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv 335 (463)
T KOG0270|consen 257 NVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKV 335 (463)
T ss_pred eeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEE
Confidence 5799999999999999999999999999999999999998889999999999999999998532 222233 45778899
Q ss_pred EEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 90 TFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 90 ~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|.| ....++++..||.++-+|+|
T Consensus 336 ~w~~~se~~f~~~tddG~v~~~D~R 360 (463)
T KOG0270|consen 336 AWDPHSENSFFVSTDDGTVYYFDIR 360 (463)
T ss_pred EecCCCceeEEEecCCceEEeeecC
Confidence 9998 44567888899999999986
No 111
>KOG1407|consensus
Probab=99.72 E-value=2e-16 Score=91.09 Aligned_cols=108 Identities=20% Similarity=0.229 Sum_probs=95.4
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
++|+-+++++..-...|.|.|-....-+++..++.|.....|++|+ |+|+++++|+.|-.+.+||+...-+++.+..+.
T Consensus 153 ~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~-p~GryfA~GsADAlvSLWD~~ELiC~R~isRld 231 (313)
T KOG1407|consen 153 ISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFD-PDGRYFATGSADALVSLWDVDELICERCISRLD 231 (313)
T ss_pred eeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEEC-CCCceEeeccccceeeccChhHhhhheeecccc
Confidence 3455555655555556899999999999999999999999999999 889999999999999999999999999999888
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
=+|..++|+.+|++|+++++|..|-|-++
T Consensus 232 wpVRTlSFS~dg~~lASaSEDh~IDIA~v 260 (313)
T KOG1407|consen 232 WPVRTLSFSHDGRMLASASEDHFIDIAEV 260 (313)
T ss_pred CceEEEEeccCcceeeccCccceEEeEec
Confidence 89999999999999999999998877554
No 112
>KOG1539|consensus
Probab=99.72 E-value=3.4e-16 Score=101.33 Aligned_cols=110 Identities=24% Similarity=0.366 Sum_probs=96.4
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEe---eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc---
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTY---RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC--- 75 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~--- 75 (113)
.++++++.|++.+.|...|.|-+||+.+|-....+ ..|..+|+.++.. ..++.+++++.+|.+.+||......
T Consensus 452 ~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D-~~n~~~vsa~~~Gilkfw~f~~k~l~~~ 530 (910)
T KOG1539|consen 452 TAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVD-GTNRLLVSAGADGILKFWDFKKKVLKKS 530 (910)
T ss_pred EEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEec-CCCceEEEccCcceEEEEecCCcceeee
Confidence 35788999999999999999999999999887777 4699999999998 7788999999999999999654431
Q ss_pred --------------------------------------ceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 --------------------------------------IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 --------------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
++.+.+|...+++++|||||+++++++.|++|++||+
T Consensus 531 l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDl 605 (910)
T KOG1539|consen 531 LRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDL 605 (910)
T ss_pred eccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEec
Confidence 2334578999999999999999999999999999997
No 113
>KOG0278|consensus
Probab=99.72 E-value=1.7e-17 Score=95.22 Aligned_cols=108 Identities=17% Similarity=0.304 Sum_probs=94.1
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCe-eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGH-EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
..++|+.+.+.+++|+.++.+|+||+...+ +...+.+|...|..+.|+ ...+.+++...|++||+||.++++.++++.
T Consensus 104 k~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc-~eD~~iLSSadd~tVRLWD~rTgt~v~sL~ 182 (334)
T KOG0278|consen 104 KAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWC-HEDKCILSSADDKTVRLWDHRTGTEVQSLE 182 (334)
T ss_pred eeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEe-ccCceEEeeccCCceEEEEeccCcEEEEEe
Confidence 457899999999999999999999987554 677889999999999999 777888888999999999999999888887
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+.+|.++.++++|+++. ....+.|.+||.
T Consensus 183 -~~s~VtSlEvs~dG~ilT-ia~gssV~Fwda 212 (334)
T KOG0278|consen 183 -FNSPVTSLEVSQDGRILT-IAYGSSVKFWDA 212 (334)
T ss_pred -cCCCCcceeeccCCCEEE-EecCceeEEecc
Confidence 567889999999999664 446788999985
No 114
>KOG2110|consensus
Probab=99.72 E-value=1.1e-15 Score=91.39 Aligned_cols=110 Identities=20% Similarity=0.308 Sum_probs=94.4
Q ss_pred cceEcCCCC--EEEe--eecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCc-EEEEeCCccccce
Q psy3639 3 VPRVTSSPQ--RCLT--GSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKT-LKLWASAKEECIQ 77 (113)
Q Consensus 3 ~~~~~~~~~--~~~~--~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-v~~wd~~~~~~~~ 77 (113)
.++++++.. +++. ....|.|.+||..+-++...+..|.+++-+++|+ ++|.+++++++.|+ ||++.+.+++.+.
T Consensus 132 l~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs-~~G~llATASeKGTVIRVf~v~~G~kl~ 210 (391)
T KOG2110|consen 132 LCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFS-PDGTLLATASEKGTVIRVFSVPEGQKLY 210 (391)
T ss_pred eEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEEC-CCCCEEEEeccCceEEEEEEcCCccEee
Confidence 456666553 6664 3346889999999999999999999999999999 88999999999996 8999999999999
Q ss_pred eecccc--cceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 78 TYRGHS--AEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 78 ~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+++... ..+++++|+|++.+|.+.+..++|++|.++
T Consensus 211 eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 211 EFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLE 248 (391)
T ss_pred eeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence 887543 467899999999999999999999999763
No 115
>KOG0639|consensus
Probab=99.72 E-value=3e-17 Score=101.76 Aligned_cols=107 Identities=17% Similarity=0.407 Sum_probs=97.1
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
.+++|+.+...++..||.|.|||+.....++.+++|+..+.||.++ ++|..+.+|+.|++|+.||++++..+.... ..
T Consensus 515 La~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis-~dGtklWTGGlDntvRcWDlregrqlqqhd-F~ 592 (705)
T KOG0639|consen 515 LAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-KDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FS 592 (705)
T ss_pred hhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEec-CCCceeecCCCccceeehhhhhhhhhhhhh-hh
Confidence 4678999999999999999999999999999999999999999999 899999999999999999999998777665 56
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+.|.++.++|.+.++++|-+++.+.+...
T Consensus 593 SQIfSLg~cP~~dWlavGMens~vevlh~ 621 (705)
T KOG0639|consen 593 SQIFSLGYCPTGDWLAVGMENSNVEVLHT 621 (705)
T ss_pred hhheecccCCCccceeeecccCcEEEEec
Confidence 78999999999999999999888877543
No 116
>KOG0973|consensus
Probab=99.71 E-value=1.6e-16 Score=104.53 Aligned_cols=109 Identities=30% Similarity=0.552 Sum_probs=94.4
Q ss_pred ceEcCCCCEEEeee--cCCeEEEeeCCC------------CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q psy3639 4 PRVTSSPQRCLTGS--YDRTCKLWDIKS------------GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA 69 (113)
Q Consensus 4 ~~~~~~~~~~~~~~--~d~~v~i~~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd 69 (113)
+.++|++..+++|+ .|+.+++|+... .+.+.+...|.+.|.|+.|+ ++|+++++|+.|+.|.+|+
T Consensus 19 Idv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S-~dG~~lAsGSDD~~v~iW~ 97 (942)
T KOG0973|consen 19 IDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFS-PDGSYLASGSDDRLVMIWE 97 (942)
T ss_pred EEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEEC-CCCCeEeeccCcceEEEee
Confidence 56799999999999 899999998742 23456777899999999999 8999999999999999998
Q ss_pred CCc------------------cccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 70 SAK------------------EECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 70 ~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
... .+.+..+.+|...|..+.|+|++.++++++.|++|.+||.+
T Consensus 98 ~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~ 159 (942)
T KOG0973|consen 98 RAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK 159 (942)
T ss_pred ecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccc
Confidence 652 13566778899999999999999999999999999999863
No 117
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.71 E-value=2.1e-15 Score=85.70 Aligned_cols=104 Identities=21% Similarity=0.433 Sum_probs=81.3
Q ss_pred cceEcCCCCEEEe--eecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC---CCcEEEEeCCccccce
Q psy3639 3 VPRVTSSPQRCLT--GSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF---DKTLKLWASAKEECIQ 77 (113)
Q Consensus 3 ~~~~~~~~~~~~~--~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~v~~wd~~~~~~~~ 77 (113)
.++|+|+++.+++ |..+..+.+||.+ ++.+..+. ...+..+.|+ |.|++++.++. .|.+.+||.++.+.+.
T Consensus 64 ~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~ws-P~G~~l~~~g~~n~~G~l~~wd~~~~~~i~ 139 (194)
T PF08662_consen 64 DVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWS-PDGRFLVLAGFGNLNGDLEFWDVRKKKKIS 139 (194)
T ss_pred EEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEEC-CCCCEEEEEEccCCCcEEEEEECCCCEEee
Confidence 4678999987654 4456789999996 66666664 4566789999 77888888765 4679999999888777
Q ss_pred eecccccceEEEEEccCCCEEEEeec------CCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSM------DHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~------~~~i~~~~~ 112 (113)
.... ..+..++|+|+|++++++.. |+.++||+.
T Consensus 140 ~~~~--~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 140 TFEH--SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred cccc--CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe
Confidence 7653 34678999999999998764 788999975
No 118
>KOG1539|consensus
Probab=99.71 E-value=7e-17 Score=104.40 Aligned_cols=103 Identities=17% Similarity=0.341 Sum_probs=92.3
Q ss_pred cCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccce
Q psy3639 7 TSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEV 86 (113)
Q Consensus 7 ~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v 86 (113)
+....+++.+.+|-.|+++|..+.+.++.+.+|.+.++++.|+ ++|+++++++.|++|++||+.++.++-.+. -..++
T Consensus 543 hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS-~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~ 620 (910)
T KOG1539|consen 543 HRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFS-PDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPC 620 (910)
T ss_pred eehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeC-CCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcc
Confidence 3344577888889999999999999999999999999999999 899999999999999999999999887776 45677
Q ss_pred EEEEEccCCCEEEEeecC-CcEEEee
Q psy3639 87 VGVTFSPDQSTFCSCSMD-HTARIFN 111 (113)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~-~~i~~~~ 111 (113)
.++.|+|+|.+|++.+.| ..|++|.
T Consensus 621 ~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 621 TSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred eeeEECCCCCEEEEEEecCceEEEEE
Confidence 889999999999999998 7799984
No 119
>KOG2394|consensus
Probab=99.71 E-value=8.5e-17 Score=100.11 Aligned_cols=90 Identities=20% Similarity=0.286 Sum_probs=83.9
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
+-.+|+|+|+++|+.++||.+||||..+.+.+..++..-+...|++|+ |+++++++|++|..|.+|.+...+.+..-++
T Consensus 294 n~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWS-PDGKyIvtGGEDDLVtVwSf~erRVVARGqG 372 (636)
T KOG2394|consen 294 NEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWS-PDGKYIVTGGEDDLVTVWSFEERRVVARGQG 372 (636)
T ss_pred cceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEc-CCccEEEecCCcceEEEEEeccceEEEeccc
Confidence 346889999999999999999999999988888888888889999999 8999999999999999999999998999899
Q ss_pred cccceEEEEEc
Q psy3639 82 HSAEVVGVTFS 92 (113)
Q Consensus 82 ~~~~v~~~~~~ 92 (113)
|++.|..++|.
T Consensus 373 HkSWVs~VaFD 383 (636)
T KOG2394|consen 373 HKSWVSVVAFD 383 (636)
T ss_pred cccceeeEeec
Confidence 99999999998
No 120
>KOG4283|consensus
Probab=99.70 E-value=7.2e-16 Score=90.42 Aligned_cols=104 Identities=25% Similarity=0.367 Sum_probs=88.1
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCC--CEEEEEeCCCcEEEEeCCccccceeecccccce
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG--DKILTGSFDKTLKLWASAKEECIQTYRGHSAEV 86 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v 86 (113)
+.-++.+++.|.++++||..+-+....|+ -.+.|..-+++|-.. -++++|..+-.|++.|+.++..-+++.+|.+.|
T Consensus 113 DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~v 191 (397)
T KOG4283|consen 113 DTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGV 191 (397)
T ss_pred cCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCce
Confidence 44478899999999999999888777776 567788888885333 356777788899999999999999999999999
Q ss_pred EEEEEccCCCE-EEEeecCCcEEEeecC
Q psy3639 87 VGVTFSPDQST-FCSCSMDHTARIFNTM 113 (113)
Q Consensus 87 ~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 113 (113)
.++.|+|...+ |++++.||.+++||+|
T Consensus 192 laV~Wsp~~e~vLatgsaDg~irlWDiR 219 (397)
T KOG4283|consen 192 LAVEWSPSSEWVLATGSADGAIRLWDIR 219 (397)
T ss_pred EEEEeccCceeEEEecCCCceEEEEEee
Confidence 99999997776 5789999999999986
No 121
>KOG2096|consensus
Probab=99.70 E-value=6.5e-16 Score=91.39 Aligned_cols=105 Identities=26% Similarity=0.451 Sum_probs=92.4
Q ss_pred cCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC--------cccccee
Q psy3639 7 TSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA--------KEECIQT 78 (113)
Q Consensus 7 ~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~--------~~~~~~~ 78 (113)
.-++.++++++.|..|.+|+++ |+.++.+......-...+.+ |+|+++++++..-.|++|.+- .-..+.+
T Consensus 196 A~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavS-P~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~ 273 (420)
T KOG2096|consen 196 AGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVS-PDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFS 273 (420)
T ss_pred cCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeC-CCCcEEEEecCCCCceEEEEEeccCcchhhhhhhhe
Confidence 4466789999999999999998 99999998777777888899 899999999999999999862 2245678
Q ss_pred ecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 79 YRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+++|...|...+|+++.+.+++.+.||++++||+.
T Consensus 274 LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 274 LKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred eccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 89999999999999999999999999999999973
No 122
>KOG1310|consensus
Probab=99.70 E-value=2.7e-16 Score=98.49 Aligned_cols=113 Identities=23% Similarity=0.334 Sum_probs=97.3
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee-CCCCeEEEEEEcCCCC-CEEEEEeCCCcEEEEeCCcc-----
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR-GHQNVVYAVAFSEPYG-DKILTGSFDKTLKLWASAKE----- 73 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~~~~~~~~~~~v~~wd~~~~----- 73 (113)
+++..|+.+|.+|++|++|-.+.|||.-..+.++.+. +|...|.+++|-|..+ +++++|..|..|+++|+...
T Consensus 53 VN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~ 132 (758)
T KOG1310|consen 53 VNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGM 132 (758)
T ss_pred ecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccccccccc
Confidence 4678899999999999999999999998888888774 7999999999987544 57789999999999998752
Q ss_pred -----ccceeecccccceEEEEEccCC-CEEEEeecCCcEEEeecC
Q psy3639 74 -----ECIQTYRGHSAEVVGVTFSPDQ-STFCSCSMDHTARIFNTM 113 (113)
Q Consensus 74 -----~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 113 (113)
.....+..|...|..++-.|++ +.++++++||+++.+|+|
T Consensus 133 d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiR 178 (758)
T KOG1310|consen 133 DHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIR 178 (758)
T ss_pred ccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeeccc
Confidence 3345566788899999999977 889999999999999986
No 123
>KOG2445|consensus
Probab=99.69 E-value=3.5e-15 Score=87.75 Aligned_cols=111 Identities=24% Similarity=0.401 Sum_probs=89.9
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCC----eeeEEeeCCCCeEEEEEEc-CCCCCEEEEEeCCCcEEEEeCCc----
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSG----HEICTYRGHQNVVYAVAFS-EPYGDKILTGSFDKTLKLWASAK---- 72 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~v~~wd~~~---- 72 (113)
.++.|++.|+++++++.|.+++|||.... .+....+.|.+.|..+.|. |..|+.+++++.|+++.+|.-..
T Consensus 17 hdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~ 96 (361)
T KOG2445|consen 17 HDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEE 96 (361)
T ss_pred eeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccc
Confidence 46778999999999999999999996433 3455667899999999995 45588999999999999997521
Q ss_pred -----cccceeecccccceEEEEEcc--CCCEEEEeecCCcEEEeec
Q psy3639 73 -----EECIQTYRGHSAEVVGVTFSP--DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 73 -----~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~~~~ 112 (113)
.....++......|..+.|.| -|-.+++++.||.++||+.
T Consensus 97 ~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA 143 (361)
T KOG2445|consen 97 AHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEA 143 (361)
T ss_pred cccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEec
Confidence 123345555667899999999 5678899999999999975
No 124
>KOG0322|consensus
Probab=99.69 E-value=2.7e-16 Score=90.74 Aligned_cols=67 Identities=24% Similarity=0.395 Sum_probs=62.1
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 45 AVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+.+. ++++.+++++.|+.+++|..++.+++..++.|...|++++|+|+...++.++.|+.|.+|++
T Consensus 256 gvrIR-pD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 256 GVRIR-PDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ceEEc-cCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 34444 88899999999999999999999999999999999999999999999999999999999986
No 125
>KOG0270|consensus
Probab=99.69 E-value=9.3e-17 Score=97.68 Aligned_cols=105 Identities=23% Similarity=0.406 Sum_probs=88.7
Q ss_pred CCCEEEeeecCCeEEEeeCCCCe---eeE------------------EeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEE
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGH---EIC------------------TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKL 67 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~---~~~------------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~ 67 (113)
.|+++|.|+.+..|.|||+.--. +.. .-.+|+..|.+++|+....+.|++|+.|.+|.+
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 36799999999999999985321 111 112577788899998566678999999999999
Q ss_pred EeCCccccceeecccccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 68 WASAKEECIQTYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 68 wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
||+.++++..++..|+..|.+++|+| .+.++++|+.|+++.+.|.|
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R 317 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR 317 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeecc
Confidence 99999999999998999999999999 67789999999999999976
No 126
>KOG1273|consensus
Probab=99.69 E-value=2.3e-15 Score=88.90 Aligned_cols=112 Identities=21% Similarity=0.342 Sum_probs=94.3
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcC------------------------------
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSE------------------------------ 50 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~------------------------------ 50 (113)
+++.||+++|+.|++++.|..+.+||+..|.+++.+. ...+|....|+|
T Consensus 68 i~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~ 146 (405)
T KOG1273|consen 68 ITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPK 146 (405)
T ss_pred eeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccC
Confidence 3567999999999999999999999999888777665 334444433333
Q ss_pred ----------------CCCCEEEEEeCCCcEEEEeCCccccceeecccc-cceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 51 ----------------PYGDKILTGSFDKTLKLWASAKEECIQTYRGHS-AEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 51 ----------------~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.|+++++|...|.+.++|..+.+++..++... +.|..+.++..|+.++..+.|+.|+.|+++
T Consensus 147 d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 147 DDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred CCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 567899999999999999999999998888665 788999999999999999999999999863
No 127
>KOG0642|consensus
Probab=99.68 E-value=6.9e-16 Score=96.25 Aligned_cols=109 Identities=28% Similarity=0.446 Sum_probs=93.0
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCC--------CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKS--------GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE- 73 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~- 73 (113)
...+++....++++++|+.+.+|++.. -+++.++++|.++|.|+++. .++..+++|+.||.|+.|++...
T Consensus 299 ~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~-~n~~~~ysgg~Dg~I~~w~~p~n~ 377 (577)
T KOG0642|consen 299 ALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVP-SNGEHCYSGGIDGTIRCWNLPPNQ 377 (577)
T ss_pred hhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEec-CCceEEEeeccCceeeeeccCCCC
Confidence 345677788999999999999999922 24788999999999999998 88999999999999999965421
Q ss_pred ---------ccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 74 ---------ECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 74 ---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.....+.+|...++.+++|+....|++++.||+++.|+.
T Consensus 378 dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~ 425 (577)
T KOG0642|consen 378 DPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEP 425 (577)
T ss_pred CcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeecc
Confidence 233566789999999999999899999999999999974
No 128
>KOG0641|consensus
Probab=99.67 E-value=5.8e-15 Score=84.12 Aligned_cols=111 Identities=27% Similarity=0.397 Sum_probs=97.5
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc----ccce
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE----ECIQ 77 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~----~~~~ 77 (113)
..+++.|.|+++++|..|....+||++.+++++.+..|...|.++.|+ |...++.+++.|..|++-|++.. ..+.
T Consensus 235 aav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfs-p~a~yllt~syd~~ikltdlqgdla~el~~~ 313 (350)
T KOG0641|consen 235 AAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFS-PGAHYLLTCSYDMKIKLTDLQGDLAHELPIM 313 (350)
T ss_pred EEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeC-CCceEEEEecccceEEEeecccchhhcCceE
Confidence 356889999999999999999999999999999999999999999999 77889999999999999998653 2234
Q ss_pred eecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
....|+..+..+.|+|..--+++.+.|.+..+|.+.
T Consensus 314 vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 314 VVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 445678888889999988889999999999999763
No 129
>KOG0644|consensus
Probab=99.67 E-value=3.7e-17 Score=106.09 Aligned_cols=107 Identities=28% Similarity=0.483 Sum_probs=99.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.|+.++..+.++++|++|..++||.++++.++....+|.+.+++++.+ .++..+++++.|..|++|.++.+.++..+.+
T Consensus 194 yca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs-~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrg 272 (1113)
T KOG0644|consen 194 YCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVS-SNNTMIAAASNDKVIRVWRLPDGAPVSVLRG 272 (1113)
T ss_pred eeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccc-hhhhhhhhcccCceEEEEecCCCchHHHHhc
Confidence 467788999999999999999999999999999999999999999998 7788889999999999999999999999999
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|++.|.+++|+|-. +.+.||++++||.+
T Consensus 273 htgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 273 HTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred cccceeeeccCccc----cCCCCCceEecccc
Confidence 99999999999954 66889999999964
No 130
>KOG0268|consensus
Probab=99.67 E-value=2.1e-16 Score=94.48 Aligned_cols=110 Identities=20% Similarity=0.343 Sum_probs=94.8
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCC-eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSG-HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
+-++|+|..--+.++++|..++.||++.- .++....+|.+.|.+++|+ |.|.-+++|+.|.+|++|..+.+..--.+.
T Consensus 233 N~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfs-ptG~EfvsgsyDksIRIf~~~~~~SRdiYh 311 (433)
T KOG0268|consen 233 NTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFS-PTGQEFVSGSYDKSIRIFPVNHGHSRDIYH 311 (433)
T ss_pred cceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccC-CCcchhccccccceEEEeecCCCcchhhhh
Confidence 34689997778999999999999998754 4778889999999999999 889999999999999999998876544443
Q ss_pred c-cccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 G-HSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
. ..+.|.++.||.|.+++++|+.|+.|++|..
T Consensus 312 tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 312 TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKA 344 (433)
T ss_pred HhhhheeeEEEEeccccEEEecCCCcceeeeec
Confidence 2 2467999999999999999999999999964
No 131
>KOG2111|consensus
Probab=99.67 E-value=5.5e-15 Score=87.09 Aligned_cols=98 Identities=21% Similarity=0.295 Sum_probs=85.2
Q ss_pred eeecCCeEEEeeCCCCee--eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCc-EEEEeCCccccceeeccc--ccceEEE
Q psy3639 15 TGSYDRTCKLWDIKSGHE--ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKT-LKLWASAKEECIQTYRGH--SAEVVGV 89 (113)
Q Consensus 15 ~~~~d~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-v~~wd~~~~~~~~~~~~~--~~~v~~~ 89 (113)
.|-.-|.|.+-|+...+. ...+..|...|.+++++ .+|..+++++..|+ ||+||..+++.+..++.. ...++++
T Consensus 154 Pg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln-~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~i 232 (346)
T KOG2111|consen 154 PGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALN-LQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCI 232 (346)
T ss_pred CCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEc-CCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEE
Confidence 366678899988865554 46778899999999999 99999999999997 899999999998888743 3579999
Q ss_pred EEccCCCEEEEeecCCcEEEeecC
Q psy3639 90 TFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|||++.++++++..|++++|.++
T Consensus 233 aFSp~~s~LavsSdKgTlHiF~l~ 256 (346)
T KOG2111|consen 233 AFSPNSSWLAVSSDKGTLHIFSLR 256 (346)
T ss_pred EeCCCccEEEEEcCCCeEEEEEee
Confidence 999999999999999999999874
No 132
>KOG1408|consensus
Probab=99.66 E-value=3.7e-15 Score=96.03 Aligned_cols=108 Identities=29% Similarity=0.439 Sum_probs=100.0
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeC---CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRG---HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
.++.|+.+++++++.|+.|+||++..++..+.|++ |.+....+... |.+.++++...|.++.++|..+++++..+.
T Consensus 602 m~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lD-PSgiY~atScsdktl~~~Df~sgEcvA~m~ 680 (1080)
T KOG1408|consen 602 MAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILD-PSGIYLATSCSDKTLCFVDFVSGECVAQMT 680 (1080)
T ss_pred eeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEEC-CCccEEEEeecCCceEEEEeccchhhhhhc
Confidence 46788999999999999999999999999999975 55667788888 779999999999999999999999999999
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+|...|..+.|.+|-++|++.+.||.|-+|.+
T Consensus 681 GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~l 712 (1080)
T KOG1408|consen 681 GHSEAVTGVKFLNDCKHLISVSGDGCIFVWKL 712 (1080)
T ss_pred CcchheeeeeecccchhheeecCCceEEEEEC
Confidence 99999999999999999999999999999976
No 133
>KOG1063|consensus
Probab=99.66 E-value=1.7e-15 Score=96.53 Aligned_cols=110 Identities=20% Similarity=0.369 Sum_probs=95.1
Q ss_pred CcceEcCCCCEEEeeecC-----CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc--
Q psy3639 2 GVPRVTSSPQRCLTGSYD-----RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE-- 74 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~-- 74 (113)
.+++.+|++++++++... ..|++|+..+-...+.+.+|.-.|+.++|+ |+++++++.+.|+++.+|......
T Consensus 529 ~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FS-pdg~~LLsvsRDRt~sl~~~~~~~~~ 607 (764)
T KOG1063|consen 529 YALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFS-PDGRYLLSVSRDRTVSLYEVQEDIKD 607 (764)
T ss_pred EEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEEC-CCCcEEEEeecCceEEeeeeecccch
Confidence 467889999999998763 457899998888888999999999999999 889999999999999999875432
Q ss_pred --cceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 75 --CIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 75 --~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.....+.|...|++.+|+|++.+|++++.|.++++|..
T Consensus 608 e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~ 647 (764)
T KOG1063|consen 608 EFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEE 647 (764)
T ss_pred hhhhccccccceEEEEcccCcccceeEEecCCceEEEEec
Confidence 22335678889999999999999999999999999965
No 134
>KOG0772|consensus
Probab=99.66 E-value=2.6e-15 Score=93.37 Aligned_cols=111 Identities=18% Similarity=0.289 Sum_probs=88.4
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeE------------EeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEIC------------TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA 69 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd 69 (113)
+..++++.+..+++.+.....+++|-.....+. .-++|...+++.+|+|.+...+++++.||++++||
T Consensus 218 ~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWd 297 (641)
T KOG0772|consen 218 NSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWD 297 (641)
T ss_pred ceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEe
Confidence 456889999988888778889999965333222 23589999999999998889999999999999999
Q ss_pred CCccc-cceeec-----ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 70 SAKEE-CIQTYR-----GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 70 ~~~~~-~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+...+ .+..++ +..-++...+|+|+|..++.++.||.|.+|+.
T Consensus 298 v~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~ 346 (641)
T KOG0772|consen 298 VNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDK 346 (641)
T ss_pred cCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeec
Confidence 97653 233332 12235788999999999999999999999985
No 135
>KOG0268|consensus
Probab=99.66 E-value=3.9e-16 Score=93.36 Aligned_cols=110 Identities=17% Similarity=0.238 Sum_probs=94.0
Q ss_pred CcceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceee
Q psy3639 2 GVPRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTY 79 (113)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~ 79 (113)
.++.++|... .|++++.|+.|.+||++++.+++.+. .+.....++|+| ....++++++|..+..+|++.. .++..+
T Consensus 191 ~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnP-eafnF~~a~ED~nlY~~DmR~l~~p~~v~ 268 (433)
T KOG0268|consen 191 SSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNP-EAFNFVAANEDHNLYTYDMRNLSRPLNVH 268 (433)
T ss_pred eEEecCCCcchheeeeccCCceEEEecccCCccceee-eeccccceecCc-cccceeeccccccceehhhhhhcccchhh
Confidence 3456777654 67778899999999999998887665 445568999995 8889999999999999999875 577888
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..|.+.|.+++|||.|.-+++|+.|.+|+||.++
T Consensus 269 ~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~ 302 (433)
T KOG0268|consen 269 KDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVN 302 (433)
T ss_pred cccceeEEEeccCCCcchhccccccceEEEeecC
Confidence 8999999999999999999999999999999763
No 136
>KOG0301|consensus
Probab=99.65 E-value=2.2e-15 Score=95.99 Aligned_cols=96 Identities=29% Similarity=0.489 Sum_probs=87.5
Q ss_pred EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEE
Q psy3639 12 RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTF 91 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~ 91 (113)
.+++|+.|++|++|.- ++.++++.+|+.-|..+++- + ...+++++.||.|++|++ +++++..+.+|..-+++++.
T Consensus 153 ~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl-~-~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~ 227 (745)
T KOG0301|consen 153 TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVL-D-DSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISM 227 (745)
T ss_pred cEEeccCcceeeeccC--CchhhhhccchhheeeeEEe-c-CCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEe
Confidence 7899999999999985 77889999999999999997 3 457889999999999998 88889999999999999998
Q ss_pred ccCCCEEEEeecCCcEEEeec
Q psy3639 92 SPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 92 ~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+++..++++++|+++++|+-
T Consensus 228 ~~~~~~Ivs~gEDrtlriW~~ 248 (745)
T KOG0301|consen 228 ALSDGLIVSTGEDRTLRIWKK 248 (745)
T ss_pred cCCCCeEEEecCCceEEEeec
Confidence 888889999999999999974
No 137
>KOG4378|consensus
Probab=99.65 E-value=1.7e-15 Score=94.04 Aligned_cols=109 Identities=16% Similarity=0.247 Sum_probs=92.6
Q ss_pred ceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEe-eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 4 PRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTY-RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 4 ~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
..+++..+ +|.+++++|.|.+||+....+...+ +.|..|...++|+|.+..++++.+.|..|.+||....+....+.
T Consensus 170 l~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~- 248 (673)
T KOG4378|consen 170 LRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT- 248 (673)
T ss_pred eecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-
Confidence 45677665 5667999999999999876666544 56999999999999999999999999999999998776555554
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
...+...++|.++|.+|+.|+..|.|..||+|
T Consensus 249 y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R 280 (673)
T KOG4378|consen 249 YSHPLSTVAFSECGTYLCAGNSKGELIAYDMR 280 (673)
T ss_pred ecCCcceeeecCCceEEEeecCCceEEEEecc
Confidence 45678899999999999999999999999986
No 138
>KOG0290|consensus
Probab=99.65 E-value=6.7e-15 Score=86.14 Aligned_cols=105 Identities=28% Similarity=0.491 Sum_probs=85.1
Q ss_pred CCCEEEeeecCCeEEEeeCCCCee---eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc----------
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHE---ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC---------- 75 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~---------- 75 (113)
+.+++.+++-|.+..+||++++.. ...+-.|...|.+++|....-..|++.+.||.+++||++..+.
T Consensus 162 dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~ 241 (364)
T KOG0290|consen 162 DPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSP 241 (364)
T ss_pred CcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCC
Confidence 457899999999999999998732 3345569999999999954456899999999999999754311
Q ss_pred --------------------------------------ceeecccccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 76 --------------------------------------IQTYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 76 --------------------------------------~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
+..++.|...|+.++|.| .+.++++++.|-...+||+.
T Consensus 242 ~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~ 318 (364)
T KOG0290|consen 242 STPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQ 318 (364)
T ss_pred CCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecc
Confidence 222356889999999999 66789999999999999973
No 139
>KOG0647|consensus
Probab=99.65 E-value=7.9e-15 Score=86.03 Aligned_cols=107 Identities=21% Similarity=0.361 Sum_probs=88.2
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCC-CEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG-DKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.++|+.+|..+++|+-|+.+++||+.+++. ..+..|..+|..+.|-+... .++++|+.|.+++.||.+....+.++.
T Consensus 77 ~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~-~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~- 154 (347)
T KOG0647|consen 77 DVCWSDDGSKVFSGGCDKQAKLWDLASGQV-SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ- 154 (347)
T ss_pred EEEEccCCceEEeeccCCceEEEEccCCCe-eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-
Confidence 468899999999999999999999998854 45566999999999984333 489999999999999999998888877
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..++++++.. .-..++++..++.|.+++|+
T Consensus 155 LPeRvYa~Dv--~~pm~vVata~r~i~vynL~ 184 (347)
T KOG0647|consen 155 LPERVYAADV--LYPMAVVATAERHIAVYNLE 184 (347)
T ss_pred ccceeeehhc--cCceeEEEecCCcEEEEEcC
Confidence 3456666554 34568888999999999884
No 140
>KOG1009|consensus
Probab=99.65 E-value=6.2e-16 Score=93.37 Aligned_cols=110 Identities=24% Similarity=0.403 Sum_probs=96.4
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCC--------C-----C---eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCc
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIK--------S-----G---HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKT 64 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~--------~-----~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 64 (113)
+++++|+|+|+++++|+++|.+.+|-.. + . .....+.+|...+..++|+ +++..+++++.|+.
T Consensus 68 VN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws-~d~~~l~s~s~dns 146 (434)
T KOG1009|consen 68 VNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWS-PDSNFLVSGSVDNS 146 (434)
T ss_pred eEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhcc-CCCceeeeeeccce
Confidence 4788999999999999999999999765 2 1 1234556799999999999 88999999999999
Q ss_pred EEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 65 LKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 65 v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
+++||+..++.+..+..|...+..++|.|.+.++++-+.|+..+.+.
T Consensus 147 ~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~ 193 (434)
T KOG1009|consen 147 VRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFS 193 (434)
T ss_pred EEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceee
Confidence 99999999999999999999999999999999999988887666554
No 141
>KOG1188|consensus
Probab=99.64 E-value=4.5e-15 Score=88.17 Aligned_cols=103 Identities=20% Similarity=0.348 Sum_probs=84.8
Q ss_pred CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCC-CCCEEEEEeCCCcEEEEeCCccccce------------
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEP-YGDKILTGSFDKTLKLWASAKEECIQ------------ 77 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~v~~wd~~~~~~~~------------ 77 (113)
..++++-.+|.|++||..++..+..++++...+..++|... .+..+.+++.||+|++||+++.....
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 45888888999999999999999999999998888888733 57789999999999999975431100
Q ss_pred -e--------------------------------------ecccccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 78 -T--------------------------------------YRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 78 -~--------------------------------------~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
. ...|...|.+++|+| +.+.|++|+.||-+.+||++
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 0 024677899999999 77889999999999999974
No 142
>KOG1036|consensus
Probab=99.64 E-value=1.9e-14 Score=84.42 Aligned_cols=99 Identities=19% Similarity=0.368 Sum_probs=83.4
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGV 89 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~ 89 (113)
...+++|+.||.|+.+|+.++...+.. .|..++.++..+ +....+++|+.|++|++||.+.......+. ....|.++
T Consensus 65 ~~~~~~G~~dg~vr~~Dln~~~~~~ig-th~~~i~ci~~~-~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~ 141 (323)
T KOG1036|consen 65 ESTIVTGGLDGQVRRYDLNTGNEDQIG-THDEGIRCIEYS-YEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCM 141 (323)
T ss_pred CceEEEeccCceEEEEEecCCcceeec-cCCCceEEEEee-ccCCeEEEcccCccEEEEeccccccccccc-cCceEEEE
Confidence 567899999999999999988766444 499999999999 667889999999999999999866556555 33478877
Q ss_pred EEccCCCEEEEeecCCcEEEeecC
Q psy3639 90 TFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.. .|+.|++|+.+..+.+||+|
T Consensus 142 ~v--~g~~LvVg~~~r~v~iyDLR 163 (323)
T KOG1036|consen 142 DV--SGNRLVVGTSDRKVLIYDLR 163 (323)
T ss_pred ec--cCCEEEEeecCceEEEEEcc
Confidence 65 68899999999999999986
No 143
>KOG0288|consensus
Probab=99.64 E-value=1.1e-14 Score=88.35 Aligned_cols=102 Identities=27% Similarity=0.402 Sum_probs=87.9
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc----cc
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH----SA 84 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~----~~ 84 (113)
.+..+++|..|++|++||.++.........+. .|+++..+ .++..+.+++-|..+.+.|.++.+....+... ..
T Consensus 311 ~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls-~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~as 388 (459)
T KOG0288|consen 311 SISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLS-MDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCAS 388 (459)
T ss_pred cceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeec-cCCeEEeeecCCCceeeeecccccEEEEeecccccccc
Confidence 36678889999999999999998888888665 89999999 78888888999999999999998766666532 23
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
....+.|||++.|+++|+.||.|+||++
T Consensus 389 DwtrvvfSpd~~YvaAGS~dgsv~iW~v 416 (459)
T KOG0288|consen 389 DWTRVVFSPDGSYVAAGSADGSVYIWSV 416 (459)
T ss_pred ccceeEECCCCceeeeccCCCcEEEEEc
Confidence 4678999999999999999999999986
No 144
>KOG0649|consensus
Probab=99.64 E-value=3e-14 Score=81.82 Aligned_cols=108 Identities=16% Similarity=0.216 Sum_probs=83.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
+..-+.|+.+.++.++.|+.++-||+++|+...++++|+.-+.++.-. .....+.+|++||++++||+++.+.+..+..
T Consensus 118 Nam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R-~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 118 NAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGR-NANGQILSGAEDGTVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred ceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeec-ccCcceeecCCCccEEEEeccccceeEEecc
Confidence 445567888878877789999999999999999999999999999986 4556788999999999999999988776653
Q ss_pred cc----------cceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HS----------AEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~----------~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+ ..|-+++ .+..++++ +....+.+|+++
T Consensus 197 yk~~~~lRp~~g~wigala--~~edWlvC-GgGp~lslwhLr 235 (325)
T KOG0649|consen 197 YKNPNLLRPDWGKWIGALA--VNEDWLVC-GGGPKLSLWHLR 235 (325)
T ss_pred ccChhhcCcccCceeEEEe--ccCceEEe-cCCCceeEEecc
Confidence 22 2233333 34555544 456678889875
No 145
>KOG0299|consensus
Probab=99.64 E-value=6.1e-15 Score=90.27 Aligned_cols=111 Identities=23% Similarity=0.449 Sum_probs=97.5
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeee----EE-------------e-eCCCCeEEEEEEcCCCCCEEEEEeCCC
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEI----CT-------------Y-RGHQNVVYAVAFSEPYGDKILTGSFDK 63 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~----~~-------------~-~~~~~~v~~~~~~~~~~~~~~~~~~~~ 63 (113)
.+++++|++++.++++.+++|.-|++.+++.. .. - +.|...+.+++.+ +++.++++|+.|.
T Consensus 146 ~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS-~Dgkylatgg~d~ 224 (479)
T KOG0299|consen 146 TSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVS-SDGKYLATGGRDR 224 (479)
T ss_pred eEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEc-CCCcEEEecCCCc
Confidence 45678999999999999999999998877532 01 1 2577789999999 8999999999999
Q ss_pred cEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 64 TLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 64 ~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.|.+|++++.+.+..+.+|.+.|.+++|-...+-+++++.|+.+++|+++
T Consensus 225 ~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~ 274 (479)
T KOG0299|consen 225 HVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSID 274 (479)
T ss_pred eEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehh
Confidence 99999999999999999999999999998877889999999999999863
No 146
>KOG0300|consensus
Probab=99.63 E-value=1e-14 Score=86.59 Aligned_cols=108 Identities=23% Similarity=0.441 Sum_probs=91.5
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCC-eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-cceeec
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSG-HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE-CIQTYR 80 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~-~~~~~~ 80 (113)
-++-+|+.+++++++.|.+.++||++.. ..+..|.+|+..|++..|. . +..+++|+.|.+|++||+++.. ++.++.
T Consensus 319 HcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~-~-dd~vVSgSDDrTvKvWdLrNMRsplATIR 396 (481)
T KOG0300|consen 319 HCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFN-T-DDRVVSGSDDRTVKVWDLRNMRSPLATIR 396 (481)
T ss_pred ccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEe-c-CCceeecCCCceEEEeeeccccCcceeee
Confidence 4567889999999999999999999744 4678899999999999997 4 5678999999999999999874 455665
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
-.++++.++.+..+..++.-..++.+++||+.
T Consensus 397 -tdS~~NRvavs~g~~iIAiPhDNRqvRlfDln 428 (481)
T KOG0300|consen 397 -TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLN 428 (481)
T ss_pred -cCCccceeEeecCCceEEeccCCceEEEEecC
Confidence 45678889999877788888889999999984
No 147
>KOG0321|consensus
Probab=99.63 E-value=3.2e-15 Score=94.69 Aligned_cols=109 Identities=22% Similarity=0.356 Sum_probs=85.3
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEE--eeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc--c-----
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICT--YRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE--C----- 75 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~--~----- 75 (113)
.+.|....|++++.|.+++.||+++.++... +.+|...+.+++|.|.+...|++|+.||.+.+||++-.. .
T Consensus 107 ~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~ 186 (720)
T KOG0321|consen 107 KWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFD 186 (720)
T ss_pred ccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHh
Confidence 3566556888999999999999999988766 889999999999998888999999999999999975321 0
Q ss_pred --------------------ceeecccccceEE---EEEccCCCEEEEeec-CCcEEEeecC
Q psy3639 76 --------------------IQTYRGHSAEVVG---VTFSPDQSTFCSCSM-DHTARIFNTM 113 (113)
Q Consensus 76 --------------------~~~~~~~~~~v~~---~~~~~~~~~~~~~~~-~~~i~~~~~~ 113 (113)
......+...+.+ +-+..|...|++++. |+.|+|||++
T Consensus 187 ~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLR 248 (720)
T KOG0321|consen 187 NRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLR 248 (720)
T ss_pred hhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeec
Confidence 0111123333443 555678889999888 9999999986
No 148
>KOG1007|consensus
Probab=99.63 E-value=4.3e-15 Score=86.90 Aligned_cols=106 Identities=22% Similarity=0.317 Sum_probs=87.9
Q ss_pred eEcC--CCCEEEeeecCCeEEEeeCCCCeeeEEe-eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceeec
Q psy3639 5 RVTS--SPQRCLTGSYDRTCKLWDIKSGHEICTY-RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTYR 80 (113)
Q Consensus 5 ~~~~--~~~~~~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~~ 80 (113)
+|+| +++.+++.+ |+++..||+++.+....+ ..|...+.++.|+|.....+++++.||.|++||.+.. .++..+.
T Consensus 177 ~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~ 255 (370)
T KOG1007|consen 177 AWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELP 255 (370)
T ss_pred ccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccC
Confidence 4555 667787775 688999999987765555 4588899999999777778999999999999999864 5788999
Q ss_pred ccccceEEEEEccC-CCEEEEeecCCcEEEee
Q psy3639 81 GHSAEVVGVTFSPD-QSTFCSCSMDHTARIFN 111 (113)
Q Consensus 81 ~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~ 111 (113)
+|.-.++++.|+|. ...+++++.|..+.+|.
T Consensus 256 ~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsc 287 (370)
T KOG1007|consen 256 GHSHWVWAVRFNPEHDQLILSGGSDSAVNLSC 287 (370)
T ss_pred CCceEEEEEEecCccceEEEecCCCceeEEEe
Confidence 99999999999994 45678899999988875
No 149
>KOG1272|consensus
Probab=99.63 E-value=7.1e-16 Score=94.69 Aligned_cols=108 Identities=16% Similarity=0.234 Sum_probs=98.9
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccccc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSA 84 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~ 84 (113)
.|-|..-+|++++..|.++.-|+.+|+.+..+....+.+..++.+ |.+..+-.|..+|+|.+|...+.+++-.+-.|.+
T Consensus 216 eFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qN-P~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g 294 (545)
T KOG1272|consen 216 EFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQN-PYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRG 294 (545)
T ss_pred cccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcC-CccceEEEcCCCceEEecCCCCcchHHHHHhcCC
Confidence 456666788899999999999999999999998888888999999 6678889999999999999999998888888999
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+|.++++.++|+++++.+.|+.++|||+|
T Consensus 295 ~V~siAv~~~G~YMaTtG~Dr~~kIWDlR 323 (545)
T KOG1272|consen 295 PVSSIAVDRGGRYMATTGLDRKVKIWDLR 323 (545)
T ss_pred CcceEEECCCCcEEeecccccceeEeeec
Confidence 99999999999999999999999999986
No 150
>KOG0288|consensus
Probab=99.63 E-value=1.2e-14 Score=88.25 Aligned_cols=106 Identities=18% Similarity=0.285 Sum_probs=91.3
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeC----CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRG----HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
...++++..+++++.|.++.+.|.++....+++.. .....+.+.|+ |++.++++|+.||.|++|++.++++...+
T Consensus 347 l~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfS-pd~~YvaAGS~dgsv~iW~v~tgKlE~~l 425 (459)
T KOG0288|consen 347 LDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFS-PDGSYVAAGSADGSVYIWSVFTGKLEKVL 425 (459)
T ss_pred EeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEEC-CCCceeeeccCCCcEEEEEccCceEEEEe
Confidence 45678899999999999999999998887776642 22346788899 88999999999999999999999888777
Q ss_pred ccccc--ceEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 80 RGHSA--EVVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 80 ~~~~~--~v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
..... .|.++.|+|.|..+++++.++.+.+|
T Consensus 426 ~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 426 SLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred ccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 76554 49999999999999999999999998
No 151
>KOG0301|consensus
Probab=99.62 E-value=3.1e-14 Score=90.92 Aligned_cols=98 Identities=23% Similarity=0.475 Sum_probs=85.3
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGV 89 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~ 89 (113)
+..+++++.||.|++|++ +++.+.++.+|+..+.+++.. .++..++++++|+++++|+.. ++.+.+......+++.
T Consensus 190 ~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~-~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa 265 (745)
T KOG0301|consen 190 DSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMA-LSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSA 265 (745)
T ss_pred CCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEec-CCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEE
Confidence 346899999999999998 699999999999999999977 668899999999999999876 6667777566689999
Q ss_pred EEccCCCEEEEeecCCcEEEeec
Q psy3639 90 TFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+-++|+ +++|+.||.|+||..
T Consensus 266 ~~L~NgD-Ivvg~SDG~VrVfT~ 287 (745)
T KOG0301|consen 266 KVLLNGD-IVVGGSDGRVRVFTV 287 (745)
T ss_pred EEeeCCC-EEEeccCceEEEEEe
Confidence 9888887 778889999999964
No 152
>KOG1009|consensus
Probab=99.62 E-value=1e-14 Score=88.26 Aligned_cols=107 Identities=21% Similarity=0.452 Sum_probs=87.4
Q ss_pred EcCCCC-EEEeeecCCeEEEeeCCCCe---------eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC----
Q psy3639 6 VTSSPQ-RCLTGSYDRTCKLWDIKSGH---------EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA---- 71 (113)
Q Consensus 6 ~~~~~~-~~~~~~~d~~v~i~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~---- 71 (113)
+..+.. .+++|+.|..|++|-+..+. -...+..|...|+.+.|+ ++++.+++|+.+|.+.+|...
T Consensus 21 fq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~-p~gelLASg~D~g~v~lWk~~~~~~ 99 (434)
T KOG1009|consen 21 FQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFS-PDGELLASGGDGGEVFLWKQGDVRI 99 (434)
T ss_pred eccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEc-CCcCeeeecCCCceEEEEEecCcCC
Confidence 445554 89999999999999875432 234566799999999999 889999999999999999654
Q ss_pred ----c--------cccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 72 ----K--------EECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 72 ----~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+ ......+.+|...++.++|+|+++++++++.|+.+++||+.
T Consensus 100 ~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~ 153 (434)
T KOG1009|consen 100 FDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVH 153 (434)
T ss_pred ccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEec
Confidence 2 12234556788899999999999999999999999999974
No 153
>KOG2394|consensus
Probab=99.61 E-value=1.3e-14 Score=90.65 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=87.1
Q ss_pred cceEcCCC-CEEEeeecCCeEEEeeCCC--------------C--------------eeeEEeeCCCCeEEEEEEcCCCC
Q psy3639 3 VPRVTSSP-QRCLTGSYDRTCKLWDIKS--------------G--------------HEICTYRGHQNVVYAVAFSEPYG 53 (113)
Q Consensus 3 ~~~~~~~~-~~~~~~~~d~~v~i~~~~~--------------~--------------~~~~~~~~~~~~v~~~~~~~~~~ 53 (113)
++.|-|.+ ..++.+-.+|.+++||..- + .++..+......+..++|+ +++
T Consensus 224 ~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS-~DG 302 (636)
T KOG2394|consen 224 CIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFS-PDG 302 (636)
T ss_pred EEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEc-CCC
Confidence 45565644 5778888899999997531 0 0111122223467889999 699
Q ss_pred CEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 54 DKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 54 ~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.++++.+.||.+++||..+.+.+-.++..-+...+++|||||+++++|++|.-|.||.+
T Consensus 303 ~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf 361 (636)
T KOG2394|consen 303 KYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSF 361 (636)
T ss_pred ceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEe
Confidence 99999999999999999999988888888889999999999999999999999999976
No 154
>KOG1274|consensus
Probab=99.61 E-value=3.8e-14 Score=92.74 Aligned_cols=110 Identities=25% Similarity=0.318 Sum_probs=98.9
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+.++.....+|++++.+++|..|.+..+..-..+...+-++.+++++ .+|..++.|+.|-.|++-+..+......+++|
T Consensus 59 v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~-g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh 137 (933)
T KOG1274|consen 59 VSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVS-GSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGH 137 (933)
T ss_pred eEEEeecccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEe-cCCcEEEeecCceeEEEEeccccchheeeccc
Confidence 34566677899999999999999999887665565577889999999 88999999999999999999999889999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..+|.++.|+|.+++|++.+.||.+++||+.
T Consensus 138 ~apVl~l~~~p~~~fLAvss~dG~v~iw~~~ 168 (933)
T KOG1274|consen 138 DAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ 168 (933)
T ss_pred CCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence 9999999999999999999999999999974
No 155
>KOG2096|consensus
Probab=99.61 E-value=7.9e-14 Score=82.73 Aligned_cols=110 Identities=19% Similarity=0.382 Sum_probs=85.6
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCe------------------------------------eeEEee-------
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGH------------------------------------EICTYR------- 37 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~------------------------------------~~~~~~------- 37 (113)
+.+++|+.+|+.|++++.|+.|++|+++... .+..+.
T Consensus 89 vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG 168 (420)
T KOG2096|consen 89 VTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDG 168 (420)
T ss_pred eeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecccC
Confidence 3578999999999999999999999986310 011110
Q ss_pred ----------------CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEe
Q psy3639 38 ----------------GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSC 101 (113)
Q Consensus 38 ----------------~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 101 (113)
.|...+..+-.. .++.++++++.|..|.+|+++ ++.+..+.......+..+.||+|++++++
T Consensus 169 ~~~~~~v~~D~~~f~~kh~v~~i~iGiA-~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~ 246 (420)
T KOG2096|consen 169 SGSHHFVHIDNLEFERKHQVDIINIGIA-GNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVS 246 (420)
T ss_pred CCCcccccccccccchhcccceEEEeec-CCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEe
Confidence 123334444444 567789999999999999998 88888888777777888999999999999
Q ss_pred ecCCcEEEeec
Q psy3639 102 SMDHTARIFNT 112 (113)
Q Consensus 102 ~~~~~i~~~~~ 112 (113)
+.--.+++|..
T Consensus 247 gFTpDVkVwE~ 257 (420)
T KOG2096|consen 247 GFTPDVKVWEP 257 (420)
T ss_pred cCCCCceEEEE
Confidence 99999999964
No 156
>KOG0771|consensus
Probab=99.61 E-value=1.6e-14 Score=87.50 Aligned_cols=108 Identities=19% Similarity=0.302 Sum_probs=89.7
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee---
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY--- 79 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~--- 79 (113)
+++++.++..+++++.||++|+|+.+.-..+.....|...|.++.|+ +++..+++.+.| ..++|+..++.++...
T Consensus 149 ~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS-~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 149 VVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFS-PDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred EEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeC-CCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 57899999999999999999999987777666777799999999999 889999999999 8999998766211100
Q ss_pred ----------------------------------------c-----------ccccceEEEEEccCCCEEEEeecCCcEE
Q psy3639 80 ----------------------------------------R-----------GHSAEVVGVTFSPDQSTFCSCSMDHTAR 108 (113)
Q Consensus 80 ----------------------------------------~-----------~~~~~v~~~~~~~~~~~~~~~~~~~~i~ 108 (113)
. .....+.+++.+++|++++.|+.+|.|.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 0 0124678899999999999999999999
Q ss_pred Eeec
Q psy3639 109 IFNT 112 (113)
Q Consensus 109 ~~~~ 112 (113)
+++.
T Consensus 307 i~~~ 310 (398)
T KOG0771|consen 307 IYDA 310 (398)
T ss_pred EEEe
Confidence 9875
No 157
>KOG1332|consensus
Probab=99.60 E-value=1.3e-14 Score=83.13 Aligned_cols=101 Identities=23% Similarity=0.363 Sum_probs=82.3
Q ss_pred CEEEeeecCCeEEEeeCCCCe--eeEEeeCCCCeEEEEEEcCCCC---CEEEEEeCCCcEEEEeCCcc--c-cceeeccc
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGH--EICTYRGHQNVVYAVAFSEPYG---DKILTGSFDKTLKLWASAKE--E-CIQTYRGH 82 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~v~~wd~~~~--~-~~~~~~~~ 82 (113)
+.|++|+-|..|+||....++ ...++.+|...|.+++|.|..+ ..+++++.||++.+|-.... . ....+...
T Consensus 176 krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f 255 (299)
T KOG1332|consen 176 KRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEF 255 (299)
T ss_pred ceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccC
Confidence 569999999999999987653 4456889999999999997654 47999999999999965522 1 12233334
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
...+++++||+.|+.|++++.|+.+.+|.
T Consensus 256 ~~~~w~vSWS~sGn~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 256 PDVVWRVSWSLSGNILAVSGGDNKVTLWK 284 (299)
T ss_pred CcceEEEEEeccccEEEEecCCcEEEEEE
Confidence 57899999999999999999999999995
No 158
>KOG2106|consensus
Probab=99.60 E-value=5.3e-14 Score=87.52 Aligned_cols=102 Identities=18% Similarity=0.273 Sum_probs=87.4
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccccc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSA 84 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~ 84 (113)
+.+|+.+.+++++.|+.+++|+ ..+++.+.. ...++.++.|+ |.+ .++.|...|...+.|..+...+.... .+.
T Consensus 375 a~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fh-psg-~va~Gt~~G~w~V~d~e~~~lv~~~~-d~~ 448 (626)
T KOG2106|consen 375 ATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFH-PSG-VVAVGTATGRWFVLDTETQDLVTIHT-DNE 448 (626)
T ss_pred EcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeecc-Ccc-eEEEeeccceEEEEecccceeEEEEe-cCC
Confidence 5678889999999999999999 566666655 66788999999 556 89999999999999998866555554 488
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
++..++|+|+|.++++++.|+.|++|.+
T Consensus 449 ~ls~v~ysp~G~~lAvgs~d~~iyiy~V 476 (626)
T KOG2106|consen 449 QLSVVRYSPDGAFLAVGSHDNHIYIYRV 476 (626)
T ss_pred ceEEEEEcCCCCEEEEecCCCeEEEEEE
Confidence 9999999999999999999999999865
No 159
>KOG4328|consensus
Probab=99.60 E-value=1.3e-14 Score=88.91 Aligned_cols=112 Identities=19% Similarity=0.317 Sum_probs=89.0
Q ss_pred CcceEcCCCC--EEEeeecCCeEEEeeCCCC----eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc
Q psy3639 2 GVPRVTSSPQ--RCLTGSYDRTCKLWDIKSG----HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC 75 (113)
Q Consensus 2 ~~~~~~~~~~--~~~~~~~d~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~ 75 (113)
.+.+|+|..+ ++++|+..|.|-+||+.+. ..+..+..|..+|.++.|+|.+...+++.+.||+|++-|+.....
T Consensus 190 t~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~ 269 (498)
T KOG4328|consen 190 TSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNIS 269 (498)
T ss_pred EEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhh
Confidence 4567888664 8899999999999999533 235567789999999999999999999999999999998643210
Q ss_pred ---------------------------------------------ceeecccccceEEEEEcc-CCCEEEEeecCCcEEE
Q psy3639 76 ---------------------------------------------IQTYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARI 109 (113)
Q Consensus 76 ---------------------------------------------~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~ 109 (113)
...+..|+..|.+++++| ...++++++.|++.+|
T Consensus 270 e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kI 349 (498)
T KOG4328|consen 270 EEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKI 349 (498)
T ss_pred HHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceee
Confidence 011123567899999999 5567899999999999
Q ss_pred eecC
Q psy3639 110 FNTM 113 (113)
Q Consensus 110 ~~~~ 113 (113)
||+|
T Consensus 350 WD~R 353 (498)
T KOG4328|consen 350 WDLR 353 (498)
T ss_pred eehh
Confidence 9986
No 160
>KOG1007|consensus
Probab=99.57 E-value=5.3e-14 Score=82.44 Aligned_cols=111 Identities=18% Similarity=0.357 Sum_probs=86.2
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCee-eEEee-----CCCCeEEEEEEcC-CCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHE-ICTYR-----GHQNVVYAVAFSE-PYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~-~~~~~-----~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
|+|+-|.|++..+++-. |..|.+|++..++. +..+. ++....++-+|+| .+++.+++ ..|+++..||+++.
T Consensus 126 i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t-t~d~tl~~~D~RT~ 203 (370)
T KOG1007|consen 126 INCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT-TSDSTLQFWDLRTM 203 (370)
T ss_pred eeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE-eCCCcEEEEEccch
Confidence 46788999999888876 56789999987765 33332 3456678899997 45555554 56789999999998
Q ss_pred ccceee-cccccceEEEEEccCCC-EEEEeecCCcEEEeecC
Q psy3639 74 ECIQTY-RGHSAEVVGVTFSPDQS-TFCSCSMDHTARIFNTM 113 (113)
Q Consensus 74 ~~~~~~-~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 113 (113)
++...+ ..|.+.+..+.|+|+.. +|++++.|+.+++||+|
T Consensus 204 ~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R 245 (370)
T KOG1007|consen 204 KKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR 245 (370)
T ss_pred hhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence 766555 46788899999999766 46788999999999986
No 161
>KOG2919|consensus
Probab=99.57 E-value=5.8e-14 Score=83.34 Aligned_cols=111 Identities=14% Similarity=0.276 Sum_probs=90.8
Q ss_pred CcceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-CCcEEEEeCCcc-cccee
Q psy3639 2 GVPRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-DKTLKLWASAKE-ECIQT 78 (113)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~v~~wd~~~~-~~~~~ 78 (113)
.+.+++|... .++.++....+-||+-...++++.+-+|.+.|+.+.|+ ++|+.+.+|.. +-+|..||++.. ..+..
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~-edGn~lfsGaRk~dkIl~WDiR~~~~pv~~ 289 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWC-EDGNKLFSGARKDDKILCWDIRYSRDPVYA 289 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEec-cCcCeecccccCCCeEEEEeehhccchhhh
Confidence 4667888654 89999999999999988889999999999999999999 77888777765 668999999865 56666
Q ss_pred eccccc-ceEE--EEEccCCCEEEEeecCCcEEEeecC
Q psy3639 79 YRGHSA-EVVG--VTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 79 ~~~~~~-~v~~--~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+..|.. .-.. +...|++++|++|+.+|.|++||++
T Consensus 290 L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk 327 (406)
T KOG2919|consen 290 LERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLK 327 (406)
T ss_pred hhhhccCccceEEEecCCCCceeeccCCCccEEEEecC
Confidence 665543 2333 4557899999999999999999974
No 162
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.57 E-value=3.7e-13 Score=80.44 Aligned_cols=108 Identities=9% Similarity=0.115 Sum_probs=79.4
Q ss_pred ceEcCCCCEEEe-eecCCeEEEeeCCCCeeeEEeeCCC-------CeEEEEEEcCCCCCEE-EEEeCCCcEEEEeCCccc
Q psy3639 4 PRVTSSPQRCLT-GSYDRTCKLWDIKSGHEICTYRGHQ-------NVVYAVAFSEPYGDKI-LTGSFDKTLKLWASAKEE 74 (113)
Q Consensus 4 ~~~~~~~~~~~~-~~~d~~v~i~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~-~~~~~~~~v~~wd~~~~~ 74 (113)
.+++++++.++. +..++.+++||+.+++.+..+..+. .....++++ ++++.+ ++...++.+.+||..+++
T Consensus 162 ~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s-~dg~~~~~~~~~~~~i~v~d~~~~~ 240 (300)
T TIGR03866 162 AEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLT-KDGKTAFVALGPANRVAVVDAKTYE 240 (300)
T ss_pred EEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEEC-CCCCEEEEEcCCCCeEEEEECCCCc
Confidence 467899987754 4568999999999888766654221 123467888 667664 444556789999998877
Q ss_pred cceeecccccceEEEEEccCCCEEEEe-ecCCcEEEeecC
Q psy3639 75 CIQTYRGHSAEVVGVTFSPDQSTFCSC-SMDHTARIFNTM 113 (113)
Q Consensus 75 ~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 113 (113)
.+.... +...+.+++|+|+|.+++++ ..++.|.+||++
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~ 279 (300)
T TIGR03866 241 VLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVA 279 (300)
T ss_pred EEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECC
Confidence 655443 34568899999999998876 468999999974
No 163
>KOG0321|consensus
Probab=99.57 E-value=1.8e-14 Score=91.41 Aligned_cols=103 Identities=19% Similarity=0.322 Sum_probs=87.7
Q ss_pred CCEEEeeecCCeEEEeeCCCCee------eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccccee--ecc
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHE------ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQT--YRG 81 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~--~~~ 81 (113)
.+.|+.+.+||.|.++|...... +.....|...|.++.|- +....|++++.|.++++||+..++.... +.+
T Consensus 64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wa-pge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~G 142 (720)
T KOG0321|consen 64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWA-PGESLLVSASGDSTIRPWDVKTSRLVGGRLNLG 142 (720)
T ss_pred cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccC-CCceeEEEccCCceeeeeeeccceeecceeecc
Confidence 35788999999999999864321 23344689999999999 5778899999999999999999887766 888
Q ss_pred cccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
|...+.+++|.| +...|++|+.||.+.|||++
T Consensus 143 H~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R 175 (720)
T KOG0321|consen 143 HTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR 175 (720)
T ss_pred cccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence 999999999999 66788999999999999985
No 164
>KOG2048|consensus
Probab=99.57 E-value=3.1e-13 Score=86.22 Aligned_cols=108 Identities=13% Similarity=0.281 Sum_probs=90.3
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccc--eeecc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECI--QTYRG 81 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~--~~~~~ 81 (113)
.+|+ .+..|.+.+.+|.|.-||+.+.+....++...+.+.+++.+ +.+..++.|+.||.+..++...++.. ..+..
T Consensus 75 L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~-p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~r 152 (691)
T KOG2048|consen 75 LAWA-EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAIN-PENTILAIGCDDGVLYDFSIGPDKITYKRSLMR 152 (691)
T ss_pred EEEc-cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeC-CccceEEeecCCceEEEEecCCceEEEEeeccc
Confidence 3555 34567777789999999999999999999999999999999 66788999999997777777666533 33445
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.++++.+++|+|++..++.|+.||.|++||..
T Consensus 153 q~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~ 184 (691)
T KOG2048|consen 153 QKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVK 184 (691)
T ss_pred ccceEEEEEecCCccEEEecccCceEEEEEcC
Confidence 57899999999999999999999999999973
No 165
>KOG4227|consensus
Probab=99.56 E-value=1.1e-13 Score=84.27 Aligned_cols=112 Identities=11% Similarity=0.196 Sum_probs=95.8
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCC------CeeeEEee-CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKS------GHEICTYR-GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
++...|+.++++|++|+.|..+++|++.. .++++... .|...|.+++|. ..+..+++|..+++|...|+.+.
T Consensus 59 iNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~-~~N~~~~SG~~~~~VI~HDiEt~ 137 (609)
T KOG4227|consen 59 INALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFD-LENRFLYSGERWGTVIKHDIETK 137 (609)
T ss_pred cceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEc-cCCeeEecCCCcceeEeeecccc
Confidence 35667899999999999999999999853 35565554 367899999999 77889999999999999999999
Q ss_pred ccceeeccc--ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 74 ECIQTYRGH--SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 74 ~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.+..+... .+.|+.+..+|..+.|++.+.++.+.+||.+
T Consensus 138 qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~R 179 (609)
T KOG4227|consen 138 QSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNR 179 (609)
T ss_pred eeeeeecccCcccceeecccCCCCceEEEEecCceEEEEecc
Confidence 888877633 3589999999999999999999999999975
No 166
>KOG1034|consensus
Probab=99.56 E-value=1e-13 Score=82.34 Aligned_cols=67 Identities=33% Similarity=0.646 Sum_probs=59.6
Q ss_pred ceEcCC-CCEEEeeecCCeEEEeeCCCCeeeEEe---eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q psy3639 4 PRVTSS-PQRCLTGSYDRTCKLWDIKSGHEICTY---RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA 71 (113)
Q Consensus 4 ~~~~~~-~~~~~~~~~d~~v~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~ 71 (113)
+.+.|. .+++++++.|..|++||+.+..++..+ .+|...|.++.|+ .++..+++++.|..+++|++.
T Consensus 141 ik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~-~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 141 IKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFS-LDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred hhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEc-CCCCeeeccCCcceEEEEecC
Confidence 455664 479999999999999999999988776 5799999999999 889999999999999999976
No 167
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.55 E-value=5.6e-13 Score=79.66 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=79.4
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEE-EEEeCCCcEEEEeCCccccceeecccccceEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKI-LTGSFDKTLKLWASAKEECIQTYRGHSAEVVG 88 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~ 88 (113)
+..+++++.|+.+++||..+++.+..+..+.. +..++++ +++..+ +++..++.+++||..+++.+..+..+. .+..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~ 77 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLS-KDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-DPEL 77 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEEC-CCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-CccE
Confidence 35788999999999999999998888875544 5679999 666655 667788999999999887766665433 3467
Q ss_pred EEEccCCCEEEEe-ecCCcEEEeecC
Q psy3639 89 VTFSPDQSTFCSC-SMDHTARIFNTM 113 (113)
Q Consensus 89 ~~~~~~~~~~~~~-~~~~~i~~~~~~ 113 (113)
+.|+|+++.++++ ..++.+++||++
T Consensus 78 ~~~~~~g~~l~~~~~~~~~l~~~d~~ 103 (300)
T TIGR03866 78 FALHPNGKILYIANEDDNLVTVIDIE 103 (300)
T ss_pred EEECCCCCEEEEEcCCCCeEEEEECC
Confidence 8999999977655 568999999974
No 168
>KOG4328|consensus
Probab=99.55 E-value=5.3e-14 Score=86.35 Aligned_cols=108 Identities=20% Similarity=0.286 Sum_probs=87.6
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCee-eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccc----eee
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHE-ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECI----QTY 79 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~----~~~ 79 (113)
.++.....++.++.=|...+||.+++.. ...+..|...|..++++|-...++++++.|+++++||++..... ..-
T Consensus 286 d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst 365 (498)
T KOG4328|consen 286 DFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLST 365 (498)
T ss_pred cccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceec
Confidence 3445555677777767889999988764 56667788899999999988999999999999999999864322 222
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
-.|...|.+..|||.+-.+++.+.|..|+|||.
T Consensus 366 ~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ds 398 (498)
T KOG4328|consen 366 LPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDS 398 (498)
T ss_pred ccccceeeeeEEcCCCCceEeeccCCceEEeec
Confidence 347889999999998888999999999999985
No 169
>KOG0303|consensus
Probab=99.55 E-value=8e-14 Score=84.47 Aligned_cols=109 Identities=17% Similarity=0.357 Sum_probs=89.3
Q ss_pred CcceEcCCC-CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 2 GVPRVTSSP-QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
..++|+|.- +.|++++.|..|.+||+.+++.+.++. |...|.++.|+ .+|.++++.+.|.+|++||.++++.+..-.
T Consensus 135 g~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn-~dGs~l~TtckDKkvRv~dpr~~~~v~e~~ 212 (472)
T KOG0303|consen 135 GLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFN-RDGSLLCTTCKDKKVRVIDPRRGTVVSEGV 212 (472)
T ss_pred EEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEec-cCCceeeeecccceeEEEcCCCCcEeeecc
Confidence 356777754 578899999999999999999988888 99999999999 999999999999999999999999888777
Q ss_pred cccc-ceEEEEEccCCCEEEEee---cCCcEEEeec
Q psy3639 81 GHSA-EVVGVTFSPDQSTFCSCS---MDHTARIFNT 112 (113)
Q Consensus 81 ~~~~-~v~~~~~~~~~~~~~~~~---~~~~i~~~~~ 112 (113)
+|.+ .-....|-.+|..+-+|- .++.+-+||.
T Consensus 213 ~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp 248 (472)
T KOG0303|consen 213 AHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDP 248 (472)
T ss_pred cccCCCcceeEEeccCceeeeccccccccceeccCc
Confidence 6754 344566777888443332 2577888874
No 170
>KOG0649|consensus
Probab=99.53 E-value=6.4e-13 Score=76.48 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=55.2
Q ss_pred EEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 43 VYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 43 v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
|.++...|..+..+ .++.|+.++.||+++++...++++|+..+.++.--.....+++|++||++++||++
T Consensus 117 INam~ldP~enSi~-~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~k 186 (325)
T KOG0649|consen 117 INAMWLDPSENSIL-FAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTK 186 (325)
T ss_pred cceeEeccCCCcEE-EecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEecc
Confidence 45555554444444 44588999999999999999999999999999873334458899999999999975
No 171
>KOG2919|consensus
Probab=99.52 E-value=4.2e-13 Score=79.77 Aligned_cols=110 Identities=16% Similarity=0.341 Sum_probs=90.6
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeC-CCCee--eE-E----eeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDI-KSGHE--IC-T----YRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE 74 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~-~~~~~--~~-~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~ 74 (113)
..+|+|+|..+++|- ...|++||+ +.|.. .. + -.+..+-+.+++++|.+...++.++....+-+|.-....
T Consensus 163 sL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~ 241 (406)
T KOG2919|consen 163 SLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRR 241 (406)
T ss_pred eEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCC
Confidence 468999999988775 578999998 44432 11 1 123467789999998888899999999999999888888
Q ss_pred cceeecccccceEEEEEccCCCEEEEeec-CCcEEEeecC
Q psy3639 75 CIQTYRGHSAEVVGVTFSPDQSTFCSCSM-DHTARIFNTM 113 (113)
Q Consensus 75 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 113 (113)
++..+.+|.+.|..++|.++|+.|++|.. +..|..||+|
T Consensus 242 pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR 281 (406)
T KOG2919|consen 242 PLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIR 281 (406)
T ss_pred ceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeeh
Confidence 89999999999999999999999988765 6789999986
No 172
>KOG2055|consensus
Probab=99.52 E-value=5.6e-13 Score=82.09 Aligned_cols=106 Identities=15% Similarity=0.260 Sum_probs=93.1
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
..+++++++++..+..|.|.+-...+++.+..++ ..+.+..+.|+ .++..+++.+.+|.|.+||++...+++.+...
T Consensus 309 FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fs-Sdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~- 385 (514)
T KOG2055|consen 309 FEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFS-SDSKELLASGGTGEVYVWNLRQNSCLHRFVDD- 385 (514)
T ss_pred eEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEe-cCCcEEEEEcCCceEEEEecCCcceEEEEeec-
Confidence 4678999999999999999999999999998888 77889999999 88899999999999999999999888888733
Q ss_pred cce--EEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 84 AEV--VGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 84 ~~v--~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+.+ .+++.+++|.+|++|+..|.|.|||.
T Consensus 386 G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~ 416 (514)
T KOG2055|consen 386 GSVHGTSLCISLNGSYLATGSDSGIVNIYDG 416 (514)
T ss_pred CccceeeeeecCCCceEEeccCcceEEEecc
Confidence 333 45777789999999999999999985
No 173
>KOG1408|consensus
Probab=99.52 E-value=4.7e-13 Score=86.64 Aligned_cols=62 Identities=15% Similarity=0.392 Sum_probs=53.8
Q ss_pred CCCCEEEEEeCCCcEEEEeCCccccceeecc---cccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 51 PYGDKILTGSFDKTLKLWASAKEECIQTYRG---HSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 51 ~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
|.-.++++++.|..|++||+.+++..+.+++ +++....+...|.|.++++.+.|.++.++|.
T Consensus 606 p~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df 670 (1080)
T KOG1408|consen 606 PTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDF 670 (1080)
T ss_pred CCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEe
Confidence 5566788999999999999999988888875 4466778999999999999999999999985
No 174
>KOG0307|consensus
Probab=99.50 E-value=2.7e-14 Score=94.92 Aligned_cols=110 Identities=20% Similarity=0.182 Sum_probs=88.0
Q ss_pred ceEcCCCCE----EEeeecCCeEEEeeCCCC------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 4 PRVTSSPQR----CLTGSYDRTCKLWDIKSG------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 4 ~~~~~~~~~----~~~~~~d~~v~i~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
.+|.+.+.. ++.|.+||.|.+||...- ..+.++..|.+.|..+.|++..++.+++|+.||.|.+||+...
T Consensus 70 L~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~ 149 (1049)
T KOG0307|consen 70 LAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKP 149 (1049)
T ss_pred eeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCc
Confidence 356665554 888999999999998652 2456777899999999999888889999999999999999876
Q ss_pred ccceeecc--cccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 74 ECIQTYRG--HSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 74 ~~~~~~~~--~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.-..+.. ..+.|.+++|+. ..+.|++++.+|...|||+|
T Consensus 150 ~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr 192 (1049)
T KOG0307|consen 150 ETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLR 192 (1049)
T ss_pred CCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecccc
Confidence 54444421 346789999987 44567889999999999986
No 175
>KOG1538|consensus
Probab=99.49 E-value=5.6e-13 Score=85.84 Aligned_cols=107 Identities=21% Similarity=0.383 Sum_probs=86.0
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc--------c
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE--------E 74 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~--------~ 74 (113)
-+++.|+|..++.+..+ .+.+||...|..++++++|...|.+++++ .+|..+++|+.|..|.+|..+-. .
T Consensus 17 d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys-~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D 94 (1081)
T KOG1538|consen 17 DIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYA-KDGKRFASGSADKSVIIWTSKLEGILKYSHND 94 (1081)
T ss_pred eeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEc-cCCceeccCCCceeEEEecccccceeeeccCC
Confidence 36899999877776654 58899999999999999999999999999 99999999999999999974321 0
Q ss_pred cceee----------------------------c-ccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 75 CIQTY----------------------------R-GHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 75 ~~~~~----------------------------~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.++.+ + .....+.+.+|..||.+++.|-.+|+|.+-+
T Consensus 95 ~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRN 160 (1081)
T KOG1538|consen 95 AIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRN 160 (1081)
T ss_pred eeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeec
Confidence 11100 0 1234678889999999999999999998754
No 176
>KOG2445|consensus
Probab=99.48 E-value=1.6e-12 Score=76.77 Aligned_cols=101 Identities=14% Similarity=0.287 Sum_probs=80.3
Q ss_pred CEEEeeecC-----CeEEEeeCCCCe----eeEEeeCCCCeEEEEEEcCCCCC---EEEEEeCCCcEEEEeCCcc-----
Q psy3639 11 QRCLTGSYD-----RTCKLWDIKSGH----EICTYRGHQNVVYAVAFSEPYGD---KILTGSFDKTLKLWASAKE----- 73 (113)
Q Consensus 11 ~~~~~~~~d-----~~v~i~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~v~~wd~~~~----- 73 (113)
.+++.|+.+ +.+.||....+. .+.++.+|+.+|.+++|.|..|. .+++++.|| |++|.+...
T Consensus 185 p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~ 263 (361)
T KOG2445|consen 185 PLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIE 263 (361)
T ss_pred ceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhh
Confidence 467777765 367888765442 34566789999999999976664 689999999 999987631
Q ss_pred ---------------ccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 74 ---------------ECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 74 ---------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+.+..+..|.++|+.+.|+-.|..|.+.+.||.+++|..
T Consensus 264 ~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWka 317 (361)
T KOG2445|consen 264 EEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKA 317 (361)
T ss_pred hhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhh
Confidence 234556788999999999999999999999999999953
No 177
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.47 E-value=1.5e-11 Score=70.06 Aligned_cols=106 Identities=14% Similarity=0.209 Sum_probs=70.6
Q ss_pred ceEcCCCCEEEeeec----------CCeEEEeeCCC-CeeeEEeeC-CCCeEEEEEEcCCCCCEEEE--EeCCCcEEEEe
Q psy3639 4 PRVTSSPQRCLTGSY----------DRTCKLWDIKS-GHEICTYRG-HQNVVYAVAFSEPYGDKILT--GSFDKTLKLWA 69 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~----------d~~v~i~~~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~--~~~~~~v~~wd 69 (113)
..|+++|+.|+.-.. -+...+|-++. +.....+.- ..++|.+++|+ |++..++. |..++.+.+||
T Consensus 11 ~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~Ws-P~g~~favi~g~~~~~v~lyd 89 (194)
T PF08662_consen 11 LHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWS-PNGNEFAVIYGSMPAKVTLYD 89 (194)
T ss_pred EEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEEC-cCCCEEEEEEccCCcccEEEc
Confidence 357888987664333 12334444422 223333332 34579999999 66666543 44567999999
Q ss_pred CCccccceeecccccceEEEEEccCCCEEEEeecC---CcEEEeecC
Q psy3639 70 SAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMD---HTARIFNTM 113 (113)
Q Consensus 70 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~ 113 (113)
++ .+.+..+. ......+.|+|+|+++++++.+ |.+.+||++
T Consensus 90 ~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~ 133 (194)
T PF08662_consen 90 VK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR 133 (194)
T ss_pred Cc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECC
Confidence 96 55556554 4567889999999999998754 569999974
No 178
>KOG0280|consensus
Probab=99.47 E-value=3.1e-12 Score=75.15 Aligned_cols=110 Identities=18% Similarity=0.240 Sum_probs=88.7
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCe--eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC-cccccee-e
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGH--EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA-KEECIQT-Y 79 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~-~~~~~~~-~ 79 (113)
..|++.+..++++..+|.+.+-+..... ..+.++.|.-+..-.+|+..+++.+++|+.|+.+..||++ .++.+.. .
T Consensus 127 lD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~ 206 (339)
T KOG0280|consen 127 LDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNS 206 (339)
T ss_pred EEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecc
Confidence 3467778888888888988855544443 3447888999999999987778899999999999999999 4444544 4
Q ss_pred cccccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.|...|.++.-+| .+.++++|+.|..|++||+|
T Consensus 207 kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR 241 (339)
T KOG0280|consen 207 KVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR 241 (339)
T ss_pred eeeecceEEEecCCCCCceEEEeccccceeeeehh
Confidence 56788999998887 67899999999999999986
No 179
>KOG2048|consensus
Probab=99.47 E-value=2.7e-12 Score=82.04 Aligned_cols=106 Identities=22% Similarity=0.390 Sum_probs=89.2
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee--------CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR--------GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC 75 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~ 75 (113)
+.|++++..++.|+.||.|++||..++..+.... ....-|.++.+- ....+++|+..|+|.+||...+..
T Consensus 160 lsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L--rd~tI~sgDS~G~V~FWd~~~gTL 237 (691)
T KOG2048|consen 160 LSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL--RDSTIASGDSAGTVTFWDSIFGTL 237 (691)
T ss_pred EEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEe--ecCcEEEecCCceEEEEcccCcch
Confidence 4678888999999999999999999887666221 123346777765 356789999999999999999999
Q ss_pred ceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 76 IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 76 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
+.++..|...|.+++-+++++.+++++.|+.+-.+.
T Consensus 238 iqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~ 273 (691)
T KOG2048|consen 238 IQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYS 273 (691)
T ss_pred hhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEE
Confidence 999999999999999999999999999999887664
No 180
>KOG4378|consensus
Probab=99.45 E-value=6.5e-13 Score=82.84 Aligned_cols=106 Identities=15% Similarity=0.219 Sum_probs=89.6
Q ss_pred cCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc-ccc
Q psy3639 7 TSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH-SAE 85 (113)
Q Consensus 7 ~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~-~~~ 85 (113)
.....++++|+..+.|+|||++.....+.+++|+..|+++..+ -...++++++..|.|.+..+.++..-..+... .+.
T Consensus 88 ~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN-~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqs 166 (673)
T KOG4378|consen 88 ASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYN-NTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQS 166 (673)
T ss_pred hhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEec-CCcceeEEeccCCcEEEEecccCccccceecCCCCe
Confidence 3344688899999999999999666667788999999999999 88899999999999999999998877777755 456
Q ss_pred eEEEEEccCCCEE-EEeecCCcEEEeecC
Q psy3639 86 VVGVTFSPDQSTF-CSCSMDHTARIFNTM 113 (113)
Q Consensus 86 v~~~~~~~~~~~~-~~~~~~~~i~~~~~~ 113 (113)
+..+.|+|..+++ .+++.+|.+.+||+.
T Consensus 167 vRll~ys~skr~lL~~asd~G~VtlwDv~ 195 (673)
T KOG4378|consen 167 VRLLRYSPSKRFLLSIASDKGAVTLWDVQ 195 (673)
T ss_pred EEEeecccccceeeEeeccCCeEEEEecc
Confidence 7789999977654 578999999999973
No 181
>KOG1188|consensus
Probab=99.45 E-value=4e-12 Score=75.91 Aligned_cols=75 Identities=16% Similarity=0.280 Sum_probs=60.7
Q ss_pred CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc----ccceeecccccceEEEEEccCC-CEEEEeecCCcEEEeec
Q psy3639 38 GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE----ECIQTYRGHSAEVVGVTFSPDQ-STFCSCSMDHTARIFNT 112 (113)
Q Consensus 38 ~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~----~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~ 112 (113)
.|..-|++++|+|.+++.+++|+.||.+.+||+... ..+.++. +...|..+.|...+ ..+.+-+..++..+|++
T Consensus 163 SH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN-~~sSI~~igw~~~~ykrI~clTH~Etf~~~el 241 (376)
T KOG1188|consen 163 SHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVIN-HGSSIHLIGWLSKKYKRIMCLTHMETFAIYEL 241 (376)
T ss_pred hccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhc-ccceeeeeeeecCCcceEEEEEccCceeEEEc
Confidence 577889999999999999999999999999998653 2334444 66789999998877 24777778889999987
Q ss_pred C
Q psy3639 113 M 113 (113)
Q Consensus 113 ~ 113 (113)
+
T Consensus 242 e 242 (376)
T KOG1188|consen 242 E 242 (376)
T ss_pred c
Confidence 4
No 182
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.45 E-value=1.2e-11 Score=75.91 Aligned_cols=109 Identities=37% Similarity=0.582 Sum_probs=90.8
Q ss_pred cceEcCCCCEEEeeec-CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCC-EEEEEeCCCcEEEEeCCccccce-ee
Q psy3639 3 VPRVTSSPQRCLTGSY-DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGD-KILTGSFDKTLKLWASAKEECIQ-TY 79 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~v~~wd~~~~~~~~-~~ 79 (113)
..+++|++..++.++. ++.+++|+...+..+..+.+|...+.+++++ +.+. .+++++.|+.+++||...+..+. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~ 238 (466)
T COG2319 160 SLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFS-PDGGLLIASGSSDGTIRLWDLSTGKLLRSTL 238 (466)
T ss_pred EEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEc-CCcceEEEEecCCCcEEEEECCCCcEEeeec
Confidence 4578899988888875 9999999999888888999899999999999 6666 55555899999999988776666 56
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..+.... -..|+|++..+++++.++.+++|+++
T Consensus 239 ~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~ 271 (466)
T COG2319 239 SGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLR 271 (466)
T ss_pred CCCCcce-eEeECCCCCEEEEecCCCcEEEeeec
Confidence 6666554 33899999888899999999999864
No 183
>KOG2110|consensus
Probab=99.45 E-value=6.5e-12 Score=75.61 Aligned_cols=107 Identities=19% Similarity=0.240 Sum_probs=82.2
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCC---CCeEEEEEEcCCCCCEEEE-Ee-CCCcEEEEeCCcccccee
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGH---QNVVYAVAFSEPYGDKILT-GS-FDKTLKLWASAKEECIQT 78 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~-~~-~~~~v~~wd~~~~~~~~~ 78 (113)
.++--+.+++++.-++. |+|||+++-+.++++... ...+.++..+ ..+.+++. ++ ..|.|.+||..+.+.+..
T Consensus 91 L~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n-~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~ 168 (391)
T KOG2110|consen 91 LAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPN-NANCYLAYPGSTTSGDVVLFDTINLQPVNT 168 (391)
T ss_pred EEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccC-CCCceEEecCCCCCceEEEEEcccceeeeE
Confidence 34445667777776654 999999999999888754 3345666665 33334443 33 358999999999999999
Q ss_pred ecccccceEEEEEccCCCEEEEeecCCc-EEEeec
Q psy3639 79 YRGHSAEVVGVTFSPDQSTFCSCSMDHT-ARIFNT 112 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~-i~~~~~ 112 (113)
+..|++.+.+++|+++|..++++++.|+ |+|+.+
T Consensus 169 I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v 203 (391)
T KOG2110|consen 169 INAHKGPLAALAFSPDGTLLATASEKGTVIRVFSV 203 (391)
T ss_pred EEecCCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence 9999999999999999999999999997 677754
No 184
>KOG3881|consensus
Probab=99.44 E-value=5.6e-12 Score=76.34 Aligned_cols=103 Identities=17% Similarity=0.320 Sum_probs=92.9
Q ss_pred CCEEEeeecCCeEEEeeCCCCe-eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccccee-ecccccceE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGH-EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQT-YRGHSAEVV 87 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~-~~~~~~~v~ 87 (113)
...|++++.-+.+++||.+.++ ++..+.....+++++... +.++.++++...+.+..||.+.++.+.. +.+..+.+.
T Consensus 216 ~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~-p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsir 294 (412)
T KOG3881|consen 216 NYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLT-PSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIR 294 (412)
T ss_pred CceEEEEecceeEEEecCcccCcceeEeccccCcceeeeec-CCCcEEEEecccchhheecccCceeeccccCCccCCcc
Confidence 5689999999999999998764 677888788899999999 7899999999999999999999987766 888889999
Q ss_pred EEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 88 GVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
++..+|.+.++++++-|+-++|+|++
T Consensus 295 sih~hp~~~~las~GLDRyvRIhD~k 320 (412)
T KOG3881|consen 295 SIHCHPTHPVLASCGLDRYVRIHDIK 320 (412)
T ss_pred eEEEcCCCceEEeeccceeEEEeecc
Confidence 99999999999999999999999974
No 185
>KOG2055|consensus
Probab=99.44 E-value=3.7e-12 Score=78.56 Aligned_cols=111 Identities=13% Similarity=0.146 Sum_probs=93.8
Q ss_pred CCcceEcCCCC-EEEeeecCCeEEEeeCCCCeee--EEeeCCC-CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccc
Q psy3639 1 MGVPRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEI--CTYRGHQ-NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECI 76 (113)
Q Consensus 1 ~~~~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~--~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~ 76 (113)
+..++|.|+|+ .+++++....++.||+.+.+.. ....++. ..+..+..+ +++++++..+..|.|.+....+++.+
T Consensus 260 i~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVS-hd~~fia~~G~~G~I~lLhakT~eli 338 (514)
T KOG2055|consen 260 IQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVS-HDSNFIAIAGNNGHIHLLHAKTKELI 338 (514)
T ss_pred cceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEec-CCCCeEEEcccCceEEeehhhhhhhh
Confidence 35678999999 8889999999999999887643 3333433 346777888 78889999999999999999999999
Q ss_pred eeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+++ .++.+..+.|+.+++.++.++.+|.|++||++
T Consensus 339 ~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~ 374 (514)
T KOG2055|consen 339 TSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLR 374 (514)
T ss_pred heee-eccEEeeEEEecCCcEEEEEcCCceEEEEecC
Confidence 9988 66789999999999999999999999999985
No 186
>KOG1523|consensus
Probab=99.44 E-value=4.3e-12 Score=75.29 Aligned_cols=110 Identities=15% Similarity=0.235 Sum_probs=94.1
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCC---eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc-c--cc
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSG---HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK-E--EC 75 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~-~--~~ 75 (113)
.|-+++++...++.+..+..+.||..... +..+++..|...++.++|+ +..+.+++++.|.-.++|...+ + ++
T Consensus 14 tchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWa-p~snrIvtcs~drnayVw~~~~~~~Wkp 92 (361)
T KOG1523|consen 14 TCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWA-PKSNRIVTCSHDRNAYVWTQPSGGTWKP 92 (361)
T ss_pred eeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeec-CCCCceeEccCCCCccccccCCCCeecc
Confidence 46688999999999999999999997654 4678889999999999999 6788899999999999998843 3 44
Q ss_pred ceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...+..++....++.|+|.++.|++++..+.|.+|-+
T Consensus 93 tlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~ 129 (361)
T KOG1523|consen 93 TLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYY 129 (361)
T ss_pred ceeEEEeccceeeEeecCcCceEEeccCccEEEEEEE
Confidence 5556667888999999999999999999999998854
No 187
>KOG0307|consensus
Probab=99.44 E-value=5e-13 Score=89.15 Aligned_cols=110 Identities=18% Similarity=0.329 Sum_probs=93.5
Q ss_pred cceEcCCCC-EEEeeecC---CeEEEeeCCCC-eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce
Q psy3639 3 VPRVTSSPQ-RCLTGSYD---RTCKLWDIKSG-HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 3 ~~~~~~~~~-~~~~~~~d---~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~ 77 (113)
.+.|+|+.- .++++++| -.|.+||++-. .+++++++|...|.++.|++.+.+++++++.|+.+.+|+..+++.+.
T Consensus 211 ~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~ 290 (1049)
T KOG0307|consen 211 VLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLG 290 (1049)
T ss_pred eeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEee
Confidence 567888774 55555553 45789998643 57788889999999999998888999999999999999999999999
Q ss_pred eecccccceEEEEEcc-CCCEEEEeecCCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~ 112 (113)
.+......+..+.|+| +...++.++.||.|.|+.+
T Consensus 291 ~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl 326 (1049)
T KOG0307|consen 291 ELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSL 326 (1049)
T ss_pred ecCCCCcceeeeeecCCCcchhhhheeccceeeeee
Confidence 9998888999999999 4558889999999999876
No 188
>KOG1445|consensus
Probab=99.44 E-value=1e-12 Score=84.21 Aligned_cols=104 Identities=18% Similarity=0.296 Sum_probs=84.5
Q ss_pred CCCEEEeeecCCeEEEeeCCCCee------eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHE------ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
.+.++++++.|..|+||.+..+-. ...+-+..-.+.++.|+|....+++ .+..|.+.+||+.+.+.+..+.+|
T Consensus 91 ~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~-s~a~g~v~i~D~stqk~~~el~~h 169 (1012)
T KOG1445|consen 91 ADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILA-SGAHGSVYITDISTQKTAVELSGH 169 (1012)
T ss_pred chhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEE-eccCceEEEEEcccCceeecccCC
Confidence 556899999999999999874421 1122333456889999955444554 455689999999999999999999
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
...|.+..|+.||..+++++.|..|+|||-|
T Consensus 170 ~d~vQSa~WseDG~llatscKdkqirifDPR 200 (1012)
T KOG1445|consen 170 TDKVQSADWSEDGKLLATSCKDKQIRIFDPR 200 (1012)
T ss_pred chhhhccccccCCceEeeecCCcceEEeCCc
Confidence 9999999999999999999999999999964
No 189
>KOG1587|consensus
Probab=99.42 E-value=2.1e-12 Score=82.83 Aligned_cols=107 Identities=18% Similarity=0.245 Sum_probs=86.4
Q ss_pred eEcCCC-CEEEeeecCCeEEEeeCC-CCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc--ccceeec
Q psy3639 5 RVTSSP-QRCLTGSYDRTCKLWDIK-SGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE--ECIQTYR 80 (113)
Q Consensus 5 ~~~~~~-~~~~~~~~d~~v~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~--~~~~~~~ 80 (113)
.++|=+ +.+++++ |.++++|... ...++..++.+...+++++|+|.....|+++..+|.+.+||+... .++.+.+
T Consensus 405 ~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~ 483 (555)
T KOG1587|consen 405 SRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQK 483 (555)
T ss_pred ecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccc
Confidence 334433 4555665 8899999987 667787888788889999999888899999999999999998654 3444444
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
........+.|++.|+.+++|...|.++++++
T Consensus 484 ~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l 515 (555)
T KOG1587|consen 484 VCSPALTRVRWSPNGKLLAVGDANGTTHILKL 515 (555)
T ss_pred ccccccceeecCCCCcEEEEecCCCcEEEEEc
Confidence 44566678899999999999999999999987
No 190
>KOG0642|consensus
Probab=99.41 E-value=4.1e-12 Score=79.85 Aligned_cols=67 Identities=30% Similarity=0.546 Sum_probs=57.2
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCC----------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSG----------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWAS 70 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~ 70 (113)
|+++.++++.+++|+.||+|+.|++... .....+.||+..+..++++ .....+++++.||++++|+.
T Consensus 349 ~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s-~~~~~Llscs~DgTvr~w~~ 425 (577)
T KOG0642|consen 349 CVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALS-STKDRLLSCSSDGTVRLWEP 425 (577)
T ss_pred EEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeec-ccccceeeecCCceEEeecc
Confidence 5678999999999999999999976422 2345778999999999999 77788999999999999974
No 191
>KOG0290|consensus
Probab=99.41 E-value=3.6e-12 Score=74.94 Aligned_cols=101 Identities=21% Similarity=0.276 Sum_probs=79.3
Q ss_pred CEEEeeecCCeEEEeeCCCCeee----EE-----eeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc---cee
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEI----CT-----YRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC---IQT 78 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~----~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~---~~~ 78 (113)
+++++.+ -.+|+|.+...+.. .. -..+..+++++.|+..+.+++.+.+-|-++.+||+.++.. ..+
T Consensus 114 dlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQ 191 (364)
T KOG0290|consen 114 DLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQ 191 (364)
T ss_pred chhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeE
Confidence 4566665 36999998632211 11 1236789999999988899999999999999999988633 466
Q ss_pred ecccccceEEEEEccCC-CEEEEeecCCcEEEeecC
Q psy3639 79 YRGHSAEVVGVTFSPDQ-STFCSCSMDHTARIFNTM 113 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 113 (113)
+-.|..+|+.++|...+ +.|++.+.||.+++||+|
T Consensus 192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR 227 (364)
T KOG0290|consen 192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR 227 (364)
T ss_pred EEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence 77899999999999854 468899999999999986
No 192
>KOG2111|consensus
Probab=99.41 E-value=4.4e-11 Score=70.98 Aligned_cols=71 Identities=20% Similarity=0.295 Sum_probs=62.4
Q ss_pred CCcceEcCCCCEEEeeecCCe-EEEeeCCCCeeeEEeeC--CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRT-CKLWDIKSGHEICTYRG--HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK 72 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~-v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~ 72 (113)
+.|++++.+|.++|+++..|+ |||||..+|..+++++. ....+.+++|+ ++..+++.++..|+++++.++.
T Consensus 184 Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFS-p~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 184 IACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFS-PNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred eeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeC-CCccEEEEEcCCCeEEEEEeec
Confidence 457788999999999999988 68999999999988863 35679999999 8899999999999999998754
No 193
>KOG1963|consensus
Probab=99.41 E-value=1.4e-11 Score=80.48 Aligned_cols=109 Identities=17% Similarity=0.276 Sum_probs=91.5
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCC--C--eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKS--G--HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~ 77 (113)
.+.+++|+++.++++..||.|.+|.--. . .....+.=|-..|.+++|+ ++|.++++|+..+.+.+|...+++ .+
T Consensus 209 t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS-~~G~~LlSGG~E~VLv~Wq~~T~~-kq 286 (792)
T KOG1963|consen 209 TCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFS-SDGAYLLSGGREGVLVLWQLETGK-KQ 286 (792)
T ss_pred eeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEe-cCCceEeecccceEEEEEeecCCC-cc
Confidence 5788999999999999999999997432 1 2234555588899999999 899999999999999999999987 34
Q ss_pred eecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
-+..-.+++..+.++||+...+....|+.|++...
T Consensus 287 fLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 287 FLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred cccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence 44446789999999999999999999999988643
No 194
>KOG1524|consensus
Probab=99.40 E-value=3.8e-12 Score=80.20 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=84.8
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+-+|+|+|.-++++++||.|++|.- +|-.-.++.....+|.|++|.|.....+++.+ +.+.+=-+.....+-..+.|
T Consensus 109 ~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g--~h~~IKpL~~n~k~i~WkAH 185 (737)
T KOG1524|consen 109 SGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQG--GHISIKPLAANSKIIRWRAH 185 (737)
T ss_pred hcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEecC--CeEEEeecccccceeEEecc
Confidence 4468999999999999999999984 45444455557789999999966555555444 45555445555556777889
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+-|.+++|+|..+.+++|++|=..++||-
T Consensus 186 DGiiL~~~W~~~s~lI~sgGED~kfKvWD~ 215 (737)
T KOG1524|consen 186 DGLVLSLSWSTQSNIIASGGEDFRFKIWDA 215 (737)
T ss_pred CcEEEEeecCccccceeecCCceeEEeecc
Confidence 999999999999999999999999999984
No 195
>KOG0322|consensus
Probab=99.39 E-value=8.6e-13 Score=76.56 Aligned_cols=67 Identities=22% Similarity=0.344 Sum_probs=62.8
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWAS 70 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~ 70 (113)
-+.+-|+++.+++++.|+.+|+|+.++..++..++.|...|.+++|+ ++...++++++|+.|.+|++
T Consensus 256 gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfs-pd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 256 GVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFS-PDCELMAAASKDARISLWKL 322 (323)
T ss_pred ceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeC-CCCchhhhccCCceEEeeec
Confidence 45678999999999999999999999999999999999999999999 77789999999999999985
No 196
>KOG2106|consensus
Probab=99.39 E-value=4.4e-11 Score=74.89 Aligned_cols=106 Identities=14% Similarity=0.181 Sum_probs=87.9
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc-ceee-c
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC-IQTY-R 80 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~-~~~~-~ 80 (113)
+..|+|.+ .++.|...|.-.+.|.++...+..-. ..++++.++++ |+|..++.|+.|+.|.+|.+..... .... +
T Consensus 412 ~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~-d~~~ls~v~ys-p~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k 488 (626)
T KOG2106|consen 412 CADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHT-DNEQLSVVRYS-PDGAFLAVGSHDNHIYIYRVSANGRKYSRVGK 488 (626)
T ss_pred EeeccCcc-eEEEeeccceEEEEecccceeEEEEe-cCCceEEEEEc-CCCCEEEEecCCCeEEEEEECCCCcEEEEeee
Confidence 56789999 89999999999999998866555444 48999999999 8899999999999999998865432 2222 2
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.+.+++.++.|++|++++.+.+.|-.|.+|.
T Consensus 489 ~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 489 CSGSPITHLDWSSDSQFLVSNSGDYEILYWK 519 (626)
T ss_pred ecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence 2348999999999999999999999999994
No 197
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.38 E-value=9.1e-11 Score=72.00 Aligned_cols=105 Identities=37% Similarity=0.583 Sum_probs=87.5
Q ss_pred cCCCC-EEEeeec-CCeEEEeeCCC-CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-CCcEEEEeCCccccceeeccc
Q psy3639 7 TSSPQ-RCLTGSY-DRTCKLWDIKS-GHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-DKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 7 ~~~~~-~~~~~~~-d~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~v~~wd~~~~~~~~~~~~~ 82 (113)
.+++. .++..+. |+.+.+|+... ......+..|...+..++++ +++..+++++. ++.+++|+......+..+..|
T Consensus 119 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
T COG2319 119 SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFS-PDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGH 197 (466)
T ss_pred CCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEEC-CCCCEEEecCCCCCceEEEEcCCCceEEeeccC
Confidence 55565 4554444 89999999987 77888888999999999999 66777777775 999999999988888888888
Q ss_pred ccceEEEEEccCCC-EEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQS-TFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~-~~~~~~~~~~i~~~~~ 112 (113)
...+..++|+|++. .+++++.|+.+++||.
T Consensus 198 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~ 228 (466)
T COG2319 198 TDPVSSLAFSPDGGLLIASGSSDGTIRLWDL 228 (466)
T ss_pred CCceEEEEEcCCcceEEEEecCCCcEEEEEC
Confidence 99999999999998 4555589999999975
No 198
>KOG1272|consensus
Probab=99.37 E-value=2.7e-12 Score=79.38 Aligned_cols=104 Identities=19% Similarity=0.291 Sum_probs=84.1
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+.+-+|-.-.+-+|..+|+|.+|.....+++..+-.|.++|.++++. +.|.++++.+.|..+++||++.-..+.++..
T Consensus 256 vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~-~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t- 333 (545)
T KOG1272|consen 256 VMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVD-RGGRYMATTGLDRKVKIWDLRNFYQLHTYRT- 333 (545)
T ss_pred hhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEEC-CCCcEEeecccccceeEeeeccccccceeec-
Confidence 34456666678899999999999998888887777799999999999 8899999999999999999998876776664
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
.-+...+++|..| ++..+....+.+|
T Consensus 334 p~~a~~ls~Sqkg--lLA~~~G~~v~iw 359 (545)
T KOG1272|consen 334 PHPASNLSLSQKG--LLALSYGDHVQIW 359 (545)
T ss_pred CCCcccccccccc--ceeeecCCeeeee
Confidence 3455678887655 4455566678877
No 199
>KOG1063|consensus
Probab=99.33 E-value=3.6e-11 Score=77.44 Aligned_cols=109 Identities=18% Similarity=0.304 Sum_probs=86.6
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCee----eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc--ccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHE----ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE--ECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~--~~~ 76 (113)
-.+|+|++++|++.+.|+++.+|+...... ....+.|+.-|.+..|+ |++.++++++.|.+|++|..... +.+
T Consensus 577 ~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~-pde~~FaTaSRDK~VkVW~~~~~~d~~i 655 (764)
T KOG1063|consen 577 RLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWS-PDEKYFATASRDKKVKVWEEPDLRDKYI 655 (764)
T ss_pred EEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccC-cccceeEEecCCceEEEEeccCchhhhh
Confidence 357999999999999999999999754321 22356799999999999 78889999999999999988776 433
Q ss_pred ee--ecccccceEEEEEcc-----CCCEEEEeecCCcEEEeec
Q psy3639 77 QT--YRGHSAEVVGVTFSP-----DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 77 ~~--~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~i~~~~~ 112 (113)
.. ...+...|..++|.| .+..+++|-+.|.|.+|..
T Consensus 656 ~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~ 698 (764)
T KOG1063|consen 656 SRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRR 698 (764)
T ss_pred hhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEec
Confidence 33 223567899999987 2336788999999999973
No 200
>KOG1523|consensus
Probab=99.33 E-value=2.5e-11 Score=72.13 Aligned_cols=109 Identities=19% Similarity=0.258 Sum_probs=87.8
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCC---eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc---
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSG---HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC--- 75 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~--- 75 (113)
++++|+|..+.+++++.|..-++|....+ ++..++..+....+++.|+ |.++.+++|+....|.+|-....+.
T Consensus 59 tgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~Ws-P~enkFAVgSgar~isVcy~E~ENdWWV 137 (361)
T KOG1523|consen 59 TGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWS-PKENKFAVGSGARLISVCYYEQENDWWV 137 (361)
T ss_pred eEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeec-CcCceEEeccCccEEEEEEEecccceeh
Confidence 46789999999999999999999998444 3444555588889999999 7789999999999999987654321
Q ss_pred -ceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 76 -IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 76 -~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.+.-+.+.+.|.+++|+|++-+++.|+.|+..++|.
T Consensus 138 sKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfS 174 (361)
T KOG1523|consen 138 SKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFS 174 (361)
T ss_pred hhhhCCccccceeeeeccCCcceecccccCcceeEEE
Confidence 122233567899999999999999999999999985
No 201
>KOG1240|consensus
Probab=99.32 E-value=1.7e-10 Score=78.47 Aligned_cols=107 Identities=15% Similarity=0.197 Sum_probs=81.0
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCC-------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc--cc-
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSG-------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE--EC- 75 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~--~~- 75 (113)
.++++.++++|+.||+|++||...- +...++......+..+... +.+..++.++.||.|++.++... +.
T Consensus 1057 s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~-~~~~~~Av~t~DG~v~~~~id~~~~~~~ 1135 (1431)
T KOG1240|consen 1057 SSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC-GNGDQFAVSTKDGSVRVLRIDHYNVSKR 1135 (1431)
T ss_pred cCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec-cCCCeEEEEcCCCeEEEEEccccccccc
Confidence 3455689999999999999998532 2334454456778888888 77889999999999999876441 00
Q ss_pred ----------------c---------ee---------------------------ecccccceEEEEEccCCCEEEEeec
Q psy3639 76 ----------------I---------QT---------------------------YRGHSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 76 ----------------~---------~~---------------------------~~~~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
+ .+ .....+.|.+++.+|.+++++.|+.
T Consensus 1136 ~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts 1215 (1431)
T KOG1240|consen 1136 VATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTS 1215 (1431)
T ss_pred eeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecC
Confidence 0 00 0123467899999999999999999
Q ss_pred CCcEEEeecC
Q psy3639 104 DHTARIFNTM 113 (113)
Q Consensus 104 ~~~i~~~~~~ 113 (113)
.|.+.+||+|
T Consensus 1216 ~G~l~lWDLR 1225 (1431)
T KOG1240|consen 1216 RGQLVLWDLR 1225 (1431)
T ss_pred CceEEEEEee
Confidence 9999999986
No 202
>KOG0280|consensus
Probab=99.32 E-value=1.6e-11 Score=72.21 Aligned_cols=100 Identities=22% Similarity=0.320 Sum_probs=75.2
Q ss_pred CCCEEEeeecCCeEEEeeCCC-CeeeEE-eeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc-cccceeecccccc
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKS-GHEICT-YRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK-EECIQTYRGHSAE 85 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~-~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~-~~~~~~~~~~~~~ 85 (113)
+++++.+|++|+.+.-||++. ++.+.. .+.|...|.+|..+|+.+..+++|+.|..+++||.+. ++++..-+ ..+.
T Consensus 177 ~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GG 255 (339)
T KOG0280|consen 177 EPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGG 255 (339)
T ss_pred CCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccc
Confidence 457999999999999999983 333333 5569999999999999999999999999999999985 45555444 4578
Q ss_pred eEEEEEccCCC-EEEEeecCCcEEE
Q psy3639 86 VVGVTFSPDQS-TFCSCSMDHTARI 109 (113)
Q Consensus 86 v~~~~~~~~~~-~~~~~~~~~~i~~ 109 (113)
|+.+.++|.-. .++.++..+..++
T Consensus 256 VWRi~~~p~~~~~lL~~CMh~G~ki 280 (339)
T KOG0280|consen 256 VWRIKHHPEIFHRLLAACMHNGAKI 280 (339)
T ss_pred eEEEEecchhhhHHHHHHHhcCceE
Confidence 99999998432 2333344333333
No 203
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.31 E-value=1.3e-11 Score=52.56 Aligned_cols=39 Identities=36% Similarity=0.750 Sum_probs=36.3
Q ss_pred cccceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 73 EECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 73 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
++++.++.+|.+.|.+++|+|+++++++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 356788999999999999999999999999999999997
No 204
>KOG0650|consensus
Probab=99.31 E-value=1.2e-11 Score=78.65 Aligned_cols=107 Identities=25% Similarity=0.359 Sum_probs=89.2
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCC-eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeC------Ccc--
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSG-HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWAS------AKE-- 73 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~------~~~-- 73 (113)
-.+++|.|.-++.++.|+.+..||+.-. ++.+++.-|...+.+++++ +.-.++++++.||++.++-- ...
T Consensus 612 ~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H-~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpl 690 (733)
T KOG0650|consen 612 SMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFH-KRYPLFASGSDDGTVIVFHGMVYNDLLQNPL 690 (733)
T ss_pred eeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhc-cccceeeeecCCCcEEEEeeeeehhhhcCCc
Confidence 4578999999999999999999998754 5677888899999999999 77789999999999999842 221
Q ss_pred -ccceeeccccc----ceEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 74 -ECIQTYRGHSA----EVVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 74 -~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
-.+..+.+|.. .|....|+|...+|++++.||+|++|
T Consensus 691 iVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 691 IVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 23456666654 48888999999999999999999998
No 205
>KOG1517|consensus
Probab=99.30 E-value=8.7e-11 Score=79.02 Aligned_cols=109 Identities=17% Similarity=0.271 Sum_probs=82.7
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee-CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc---cceeec
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR-GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE---CIQTYR 80 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~---~~~~~~ 80 (113)
.|..+..+++++++-..|+|||.......+.+. +....++.+.-.-..++.+++|..||.+++||.+... .+...+
T Consensus 1172 dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R 1251 (1387)
T KOG1517|consen 1172 DWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYR 1251 (1387)
T ss_pred ehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeec
Confidence 444444566666667899999998766666553 2445577777665668999999999999999987542 455666
Q ss_pred ccccc--eEEEEEccCCCE-EEEeecCCcEEEeecC
Q psy3639 81 GHSAE--VVGVTFSPDQST-FCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~~~~~--v~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 113 (113)
.|... |.++.+.+.|-. +++++.+|.|++||+|
T Consensus 1252 ~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1252 EHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLR 1287 (1387)
T ss_pred ccCCcccceeEEeecCCCcceeeeccCCeEEEEecc
Confidence 67655 999999886655 9999999999999986
No 206
>KOG0974|consensus
Probab=99.30 E-value=3.5e-11 Score=80.02 Aligned_cols=103 Identities=23% Similarity=0.337 Sum_probs=88.5
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCCeeeE-EeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc-
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSGHEIC-TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS- 83 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~- 83 (113)
++.++.++++.++|..+|+|++++.+... +..+|...+..+.+. ++ .+++++.|.+.++|+... +.+..+.+|.
T Consensus 183 ~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~-~n--~i~t~gedctcrvW~~~~-~~l~~y~~h~g 258 (967)
T KOG0974|consen 183 TSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFL-PN--RIITVGEDCTCRVWGVNG-TQLEVYDEHSG 258 (967)
T ss_pred EccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEec-cc--eeEEeccceEEEEEeccc-ceehhhhhhhh
Confidence 46689999999999999999999988766 677899999999999 44 899999999999996543 3355777664
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..++.++..+.....++++.|+.+++||+
T Consensus 259 ~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l 287 (967)
T KOG0974|consen 259 KGIWKIAVPIGVIIKVTGGNDSTLKLWDL 287 (967)
T ss_pred cceeEEEEcCCceEEEeeccCcchhhhhh
Confidence 57899999998889999999999999986
No 207
>KOG2321|consensus
Probab=99.27 E-value=5.2e-11 Score=75.58 Aligned_cols=111 Identities=13% Similarity=0.218 Sum_probs=85.0
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee------CCC-----CeEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR------GHQ-----NVVYAVAFSEPYGDKILTGSFDKTLKLWA 69 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~------~~~-----~~v~~~~~~~~~~~~~~~~~~~~~v~~wd 69 (113)
++++.+++-..++++|+.+|.|-.||.++.+.+..+. .|. ..|++++|+ .+|..++.|..+|.+.+||
T Consensus 178 lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~-d~gL~~aVGts~G~v~iyD 256 (703)
T KOG2321|consen 178 LNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFR-DDGLHVAVGTSTGSVLIYD 256 (703)
T ss_pred ceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEec-CCceeEEeeccCCcEEEEE
Confidence 4577788888999999999999999998877665553 122 348999999 7799999999999999999
Q ss_pred CCccccceeec-ccccceEEEEEccCC-CEEEEeecCCcEEEeec
Q psy3639 70 SAKEECIQTYR-GHSAEVVGVTFSPDQ-STFCSCSMDHTARIFNT 112 (113)
Q Consensus 70 ~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~ 112 (113)
++..+++..-. ....++..+.|.+.+ .--++......++|||-
T Consensus 257 LRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~ 301 (703)
T KOG2321|consen 257 LRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDE 301 (703)
T ss_pred cccCCceeecccCCccceeeecccccCCCceEEecchHHhhhccc
Confidence 99988765544 335688899997742 22333445678888973
No 208
>KOG1587|consensus
Probab=99.26 E-value=9.4e-11 Score=75.42 Aligned_cols=108 Identities=19% Similarity=0.309 Sum_probs=82.0
Q ss_pred eEcC-CCCEEEeeecCCeEEEeeCCC---Ce-----eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC-ccc
Q psy3639 5 RVTS-SPQRCLTGSYDRTCKLWDIKS---GH-----EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA-KEE 74 (113)
Q Consensus 5 ~~~~-~~~~~~~~~~d~~v~i~~~~~---~~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~-~~~ 74 (113)
.|.+ +...++.|+++|.|..-+-.. .. ....+..|.++|..+.++|-....+.+++ |.++++|... ...
T Consensus 354 ~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~ 432 (555)
T KOG1587|consen 354 KFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIAS 432 (555)
T ss_pred eeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCC
Confidence 4444 557899999999987633221 11 12345568899999999966566666666 8999999887 666
Q ss_pred cceeecccccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 75 CIQTYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 75 ~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
++..+..+...+.+++||| ....|+++..+|.+.+||+.
T Consensus 433 Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl 472 (555)
T KOG1587|consen 433 PLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLL 472 (555)
T ss_pred cchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhh
Confidence 7777777777899999999 45678889999999999984
No 209
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.26 E-value=1.3e-09 Score=67.63 Aligned_cols=99 Identities=14% Similarity=0.152 Sum_probs=75.8
Q ss_pred EEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEc
Q psy3639 13 CLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFS 92 (113)
Q Consensus 13 ~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~ 92 (113)
+++-..++.|.+.|..+.+.+..+......-..+.++ +++++++..+.||.|.++|+.+.+.+.+.+.. .....++++
T Consensus 9 ~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s-~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~~~~~i~~s 86 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFS-PDGRYLYVANRDGTVSVIDLATGKVVATIKVG-GNPRGIAVS 86 (369)
T ss_dssp EEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-T-T-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-SEEEEEEE-
T ss_pred EEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEec-CCCCEEEEEcCCCeEEEEECCcccEEEEEecC-CCcceEEEc
Confidence 3456678999999999999999998655554456677 88999988899999999999999988888754 345789999
Q ss_pred cCCCEEEEee-cCCcEEEeecC
Q psy3639 93 PDQSTFCSCS-MDHTARIFNTM 113 (113)
Q Consensus 93 ~~~~~~~~~~-~~~~i~~~~~~ 113 (113)
++|+++++++ ..+.+.++|.+
T Consensus 87 ~DG~~~~v~n~~~~~v~v~D~~ 108 (369)
T PF02239_consen 87 PDGKYVYVANYEPGTVSVIDAE 108 (369)
T ss_dssp -TTTEEEEEEEETTEEEEEETT
T ss_pred CCCCEEEEEecCCCceeEeccc
Confidence 9999998775 58899999863
No 210
>KOG0974|consensus
Probab=99.25 E-value=2.1e-10 Score=76.46 Aligned_cols=104 Identities=23% Similarity=0.376 Sum_probs=89.3
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce-eeccccc
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ-TYRGHSA 84 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~-~~~~~~~ 84 (113)
.+++.-++++|+.-+.+.+|..........+.+|.+.+..+.++ .++.++++.+.|.++++|++.+.+.+. ..-+|..
T Consensus 141 ~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s-~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsa 219 (967)
T KOG0974|consen 141 DSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTS-LDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSA 219 (967)
T ss_pred ccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEc-cCCcEEEEEecCcceeeeecccccccCcccccccc
Confidence 35555688889999999999987444444688999999999999 889999999999999999999987665 5567999
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+++.+.|.|. .++++++|-+.++|+.
T Consensus 220 Rvw~~~~~~n--~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 220 RVWACCFLPN--RIITVGEDCTCRVWGV 245 (967)
T ss_pred eeEEEEeccc--eeEEeccceEEEEEec
Confidence 9999999987 8999999999999954
No 211
>KOG1538|consensus
Probab=99.25 E-value=3.5e-10 Score=73.40 Aligned_cols=109 Identities=19% Similarity=0.253 Sum_probs=78.4
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee---CCCCeEEEEEEcC----------------------------
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR---GHQNVVYAVAFSE---------------------------- 50 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~---~~~~~v~~~~~~~---------------------------- 50 (113)
++++|..+|++++.|..+|+|.+-|.. +++...++ +..++|.+++|+|
T Consensus 136 ~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~ 214 (1081)
T KOG1538|consen 136 ICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQ 214 (1081)
T ss_pred EEeeecCCCcEEEEeccCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEeccee
Confidence 467889999999999999999998753 44333333 3566788888876
Q ss_pred -----------------CCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 51 -----------------PYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 51 -----------------~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
++|+++..|+.|+.+++|- +.+-.+.+.......|+.++..|++.+++.|+.||+|..|++
T Consensus 215 Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 215 IGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred ecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhh
Confidence 4445555555555555542 334334444445678999999999999999999999988765
No 212
>KOG1310|consensus
Probab=99.24 E-value=4.6e-11 Score=75.65 Aligned_cols=81 Identities=22% Similarity=0.420 Sum_probs=71.6
Q ss_pred eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec-ccccceEEEEEcc--CCCEEEEeecCCcEE
Q psy3639 32 EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR-GHSAEVVGVTFSP--DQSTFCSCSMDHTAR 108 (113)
Q Consensus 32 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~~~~i~ 108 (113)
..+.+.+|++-|.++.|+ .+|.++++|+.|-.+.+||.-..+.+..+. +|...|.++.|-| +.+.+++|..|..|+
T Consensus 42 lE~eL~GH~GCVN~LeWn-~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWN-ADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhhhccccceecceeec-CCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 345778999999999999 999999999999999999998888777765 6888999999998 556788999999999
Q ss_pred EeecC
Q psy3639 109 IFNTM 113 (113)
Q Consensus 109 ~~~~~ 113 (113)
+||+.
T Consensus 121 lfdl~ 125 (758)
T KOG1310|consen 121 LFDLD 125 (758)
T ss_pred EEecc
Confidence 99973
No 213
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.24 E-value=1.1e-10 Score=49.66 Aligned_cols=39 Identities=36% Similarity=0.777 Sum_probs=35.9
Q ss_pred CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q psy3639 30 GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA 69 (113)
Q Consensus 30 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd 69 (113)
++++.++++|..+|.+++|+ +++..+++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~-~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWS-PDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEE-TTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEe-cccccceeeCCCCEEEEEC
Confidence 35778999999999999999 7799999999999999997
No 214
>KOG2139|consensus
Probab=99.24 E-value=5.5e-10 Score=67.71 Aligned_cols=108 Identities=16% Similarity=0.260 Sum_probs=80.0
Q ss_pred CcceEcCCC-CEEEeeecCCeEEEeeCCCCe------------eeE--EeeCCCCeEEEEEEcCCCCCEEEEEeC-CCcE
Q psy3639 2 GVPRVTSSP-QRCLTGSYDRTCKLWDIKSGH------------EIC--TYRGHQNVVYAVAFSEPYGDKILTGSF-DKTL 65 (113)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~d~~v~i~~~~~~~------------~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~v 65 (113)
.+.+|-|.+ ..++.|...| |.+|...... +.+ ...+| .+|+++.|+ +++..+++++. +..|
T Consensus 144 tclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn-~dgt~l~tAS~gsssi 220 (445)
T KOG2139|consen 144 TCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWN-EDGTILVTASFGSSSI 220 (445)
T ss_pred eEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEc-CCCCEEeecccCcceE
Confidence 456777754 4677777755 8899864321 111 22234 689999999 77888887766 5689
Q ss_pred EEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 66 KLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 66 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+||..++..+.......+.+.-+.|||||.+++.++-|+..++|+.
T Consensus 221 ~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 221 MIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred EEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 99999998766555444567788999999999999999999999953
No 215
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=7.3e-10 Score=70.06 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=71.9
Q ss_pred cceEcCCCCEEEeeecC---CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEE-eCCCcEEEE--eCCccccc
Q psy3639 3 VPRVTSSPQRCLTGSYD---RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTG-SFDKTLKLW--ASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~v~~w--d~~~~~~~ 76 (113)
..+|+|+++.++..+.+ ..|++||+.+++.... ..........+|+ |+++.++.+ ..+|...+| |+.+++ .
T Consensus 208 ~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~~g~~~~~~wS-PDG~~La~~~~~~g~~~Iy~~d~~~~~-~ 284 (429)
T PRK01742 208 SPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASFRGHNGAPAFS-PDGSRLAFASSKDGVLNIYVMGANGGT-P 284 (429)
T ss_pred cceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecCCCccCceeEC-CCCCEEEEEEecCCcEEEEEEECCCCC-e
Confidence 36799999988876543 4699999987754222 2122233468999 778776654 467776655 665554 3
Q ss_pred eeecccccceEEEEEccCCCEEEEee-cCCcEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCS-MDHTARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~ 112 (113)
..+..+...+....|+|+|+.++..+ .++...+|++
T Consensus 285 ~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~ 321 (429)
T PRK01742 285 SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRM 321 (429)
T ss_pred EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 44554555677899999999876554 5677788764
No 216
>KOG2139|consensus
Probab=99.23 E-value=5.8e-10 Score=67.59 Aligned_cols=101 Identities=18% Similarity=0.258 Sum_probs=76.3
Q ss_pred cceEcCCCCEEEeeec-CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 3 VPRVTSSPQRCLTGSY-DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
..++++++..+++++. |..|.+||..++..+.......+.++-+.|+ |++..+.++.-|+..++|+............
T Consensus 200 smqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwS-Pdgd~lfaAt~davfrlw~e~q~wt~erw~l 278 (445)
T KOG2139|consen 200 SMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWS-PDGDVLFAATCDAVFRLWQENQSWTKERWIL 278 (445)
T ss_pred EEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEc-CCCCEEEEecccceeeeehhcccceecceec
Confidence 4578889988888765 6779999999887665554456778899999 8899999999999999996654322222222
Q ss_pred cccceEEEEEccCCCEEEEeecC
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMD 104 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~ 104 (113)
..+.|..-.|+|+|++++.+...
T Consensus 279 gsgrvqtacWspcGsfLLf~~sg 301 (445)
T KOG2139|consen 279 GSGRVQTACWSPCGSFLLFACSG 301 (445)
T ss_pred cCCceeeeeecCCCCEEEEEEcC
Confidence 34589999999999987665443
No 217
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.22 E-value=1.2e-09 Score=66.88 Aligned_cols=107 Identities=8% Similarity=0.125 Sum_probs=73.5
Q ss_pred ceEcCCCCEEEeeec-CCeEEEeeCCCCe----eeEEeeCCCCeEEEEEEcCCCCCEE-EEEeCCCcEEEEeCCccccce
Q psy3639 4 PRVTSSPQRCLTGSY-DRTCKLWDIKSGH----EICTYRGHQNVVYAVAFSEPYGDKI-LTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~-d~~v~i~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~v~~wd~~~~~~~~ 77 (113)
+.++|+++++++++. ++.+.+|++.+.. .+..+. +......++++ ++++.+ ++...++.|.+||+.+...+.
T Consensus 85 i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~-p~g~~l~v~~~~~~~v~v~d~~~~g~l~ 162 (330)
T PRK11028 85 ISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANID-PDNRTLWVPCLKEDRIRLFTLSDDGHLV 162 (330)
T ss_pred EEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeC-CCCCEEEEeeCCCCEEEEEEECCCCccc
Confidence 567899998887664 7889999986422 223332 22345678888 566666 555567999999997633221
Q ss_pred e-----ec-ccccceEEEEEccCCCEEEEeec-CCcEEEeec
Q psy3639 78 T-----YR-GHSAEVVGVTFSPDQSTFCSCSM-DHTARIFNT 112 (113)
Q Consensus 78 ~-----~~-~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~ 112 (113)
. .. ........+.|+|+|+++++++. ++.|.+|++
T Consensus 163 ~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~ 204 (330)
T PRK11028 163 AQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQL 204 (330)
T ss_pred ccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEE
Confidence 1 11 12334578999999999988876 899999986
No 218
>KOG0650|consensus
Probab=99.20 E-value=4.5e-11 Score=76.12 Aligned_cols=108 Identities=20% Similarity=0.309 Sum_probs=92.9
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceeec
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTYR 80 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~~ 80 (113)
..+.|+|...++++++. ..|++||+..+..+..+......+..++++ +.|..++.++.|+.+..+|+.-+ +..+++.
T Consensus 570 q~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msih-p~GDnli~gs~d~k~~WfDldlsskPyk~lr 647 (733)
T KOG0650|consen 570 QRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIH-PNGDNLILGSYDKKMCWFDLDLSSKPYKTLR 647 (733)
T ss_pred eEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeec-CCCCeEEEecCCCeeEEEEcccCcchhHHhh
Confidence 35678999888888886 569999998877777776677789999999 78899999999999999999754 6677888
Q ss_pred ccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 81 GHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.|...+.+++|++.=..|++++.||++.|+.
T Consensus 648 ~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh 678 (733)
T KOG0650|consen 648 LHEKAVRSVAFHKRYPLFASGSDDGTVIVFH 678 (733)
T ss_pred hhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence 8889999999999889999999999999884
No 219
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.19 E-value=2e-09 Score=65.83 Aligned_cols=108 Identities=10% Similarity=0.262 Sum_probs=73.3
Q ss_pred ceEcCCCCEEEeeec-CCeEEEeeCCC--C--eeeEEeeCC------CCeEEEEEEcCCCCCEEEEEeC-CCcEEEEeCC
Q psy3639 4 PRVTSSPQRCLTGSY-DRTCKLWDIKS--G--HEICTYRGH------QNVVYAVAFSEPYGDKILTGSF-DKTLKLWASA 71 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~-d~~v~i~~~~~--~--~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~-~~~v~~wd~~ 71 (113)
+.++|++++++++.+ ++.|.+|++.. + +.+..+... ......+.++ |++++++++.. ++.|.+|++.
T Consensus 180 ~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~-pdg~~lyv~~~~~~~I~v~~i~ 258 (330)
T PRK11028 180 MVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHIT-PDGRHLYACDRTASLISVFSVS 258 (330)
T ss_pred EEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEEC-CCCCEEEEecCCCCeEEEEEEe
Confidence 578999998888776 89999999873 2 233333221 1123468888 77888777754 6899999985
Q ss_pred ccccceeeccc---ccceEEEEEccCCCEEEEeec-CCcEEEeec
Q psy3639 72 KEECIQTYRGH---SAEVVGVTFSPDQSTFCSCSM-DHTARIFNT 112 (113)
Q Consensus 72 ~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~ 112 (113)
.......+..+ ......+.++|+|++++++.. ++.|.+|++
T Consensus 259 ~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~ 303 (330)
T PRK11028 259 EDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEI 303 (330)
T ss_pred CCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEE
Confidence 43211111111 224467899999999988776 889999975
No 220
>KOG2321|consensus
Probab=99.19 E-value=5.4e-10 Score=71.12 Aligned_cols=101 Identities=14% Similarity=0.257 Sum_probs=82.1
Q ss_pred CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc------c--
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG------H-- 82 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~------~-- 82 (113)
.+++.|+ ...|+-+|++.|.-+..+....+.+..+..+ +...++++|+.+|.+..||.+....+..+.. +
T Consensus 147 Dly~~gs-g~evYRlNLEqGrfL~P~~~~~~~lN~v~in-~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg 224 (703)
T KOG2321|consen 147 DLYLVGS-GSEVYRLNLEQGRFLNPFETDSGELNVVSIN-EEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPG 224 (703)
T ss_pred cEEEeec-CcceEEEEccccccccccccccccceeeeec-CccceEEecccCceEEEecchhhhhheeeecccccCCCcc
Confidence 3444444 4468888999999998888888899999999 6778899999999999999988765544432 1
Q ss_pred ---ccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 83 ---SAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 83 ---~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
...|.++.|+-+|-.+++|+..|.+.|||+|
T Consensus 225 ~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLR 258 (703)
T KOG2321|consen 225 GDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLR 258 (703)
T ss_pred ccccCcceEEEecCCceeEEeeccCCcEEEEEcc
Confidence 1248999999889999999999999999986
No 221
>KOG0771|consensus
Probab=99.18 E-value=1.2e-10 Score=71.10 Aligned_cols=68 Identities=35% Similarity=0.494 Sum_probs=62.0
Q ss_pred EEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 44 YAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..++++ .++..+++++.||++|+|+.++...+.....|...|.++.|+|||.++++.+.| ...||+++
T Consensus 148 k~vaf~-~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~ 215 (398)
T KOG0771|consen 148 KVVAFN-GDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVN 215 (398)
T ss_pred eEEEEc-CCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEec
Confidence 678888 889999999999999999988888788888899999999999999999999999 99999874
No 222
>KOG4547|consensus
Probab=99.14 E-value=2e-09 Score=68.28 Aligned_cols=99 Identities=13% Similarity=0.168 Sum_probs=77.0
Q ss_pred EEEeeecCCeEEEeeCCCCeeeEEee--CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEE
Q psy3639 12 RCLTGSYDRTCKLWDIKSGHEICTYR--GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGV 89 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~ 89 (113)
.++-|...|.|.+|+...++.-..+. .|.++|.++.++ .+-.++.+++.|+.+..|+....+.+.........+.++
T Consensus 72 ~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~-~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl 150 (541)
T KOG4547|consen 72 MLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDA-QRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSL 150 (541)
T ss_pred EEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecc-cccCceEecCCceeEEEEecccceeeeeeccCCCccceE
Confidence 34445555555555555555444443 577888888888 777899999999999999999999888888888889999
Q ss_pred EEccCCCEEEEeecCCcEEEeecC
Q psy3639 90 TFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+++|||..+++++ +.|++||++
T Consensus 151 ~is~D~~~l~~as--~~ik~~~~~ 172 (541)
T KOG4547|consen 151 CISPDGKILLTAS--RQIKVLDIE 172 (541)
T ss_pred EEcCCCCEEEecc--ceEEEEEcc
Confidence 9999999998875 689999874
No 223
>KOG2315|consensus
Probab=99.14 E-value=4.2e-09 Score=66.72 Aligned_cols=104 Identities=16% Similarity=0.384 Sum_probs=79.1
Q ss_pred cceEcCCCCEEEe--eecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC---CCcEEEEeCCccccce
Q psy3639 3 VPRVTSSPQRCLT--GSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF---DKTLKLWASAKEECIQ 77 (113)
Q Consensus 3 ~~~~~~~~~~~~~--~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~v~~wd~~~~~~~~ 77 (113)
.+.|++++.-+++ |---.++.+||++ +.++..+ -.++-.++-|+ |.|++++.++. .|.+-+||..+.+++.
T Consensus 275 dv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fn-p~g~ii~lAGFGNL~G~mEvwDv~n~K~i~ 350 (566)
T KOG2315|consen 275 DVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFN-PHGNIILLAGFGNLPGDMEVWDVPNRKLIA 350 (566)
T ss_pred EEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEEC-CCCCEEEEeecCCCCCceEEEeccchhhcc
Confidence 4678898875543 4446778899986 6655555 44566788899 77888877666 4789999999988888
Q ss_pred eecccccceEEEEEccCCCEEEEeec------CCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSM------DHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~------~~~i~~~~~ 112 (113)
.+...... -+.|+|||+++++++. |+.++||+.
T Consensus 351 ~~~a~~tt--~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy 389 (566)
T KOG2315|consen 351 KFKAANTT--VFEWSPDGEYFLTATTAPRLRVDNGIKIWHY 389 (566)
T ss_pred ccccCCce--EEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence 88765443 3799999999998866 688999975
No 224
>KOG1517|consensus
Probab=99.10 E-value=3.6e-09 Score=71.63 Aligned_cols=102 Identities=19% Similarity=0.329 Sum_probs=80.1
Q ss_pred CCCEEEeeecCCeEEEeeCCCCe---eeEEeeCCCCe--EEEEEEcCCCCC-EEEEEeCCCcEEEEeCCcccc--ceeec
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGH---EICTYRGHQNV--VYAVAFSEPYGD-KILTGSFDKTLKLWASAKEEC--IQTYR 80 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~---~~~~~~~~~~~--v~~~~~~~~~~~-~~~~~~~~~~v~~wd~~~~~~--~~~~~ 80 (113)
.++.++.|-.||.+++||.+... .+...+.|... |..+.+. +.|. .+++|+.+|.|++||++.... ..+..
T Consensus 1220 ~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq-~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv 1298 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQ-RQGLGELVSGSQDGDIQLLDLRMSSKETFLTIV 1298 (1387)
T ss_pred CCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEee-cCCCcceeeeccCCeEEEEecccCcccccceee
Confidence 47899999999999999986543 46677778776 9999998 4444 599999999999999987422 22222
Q ss_pred cc---ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 GH---SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~~---~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+ ++...++..++....+++|+. +.|+||++
T Consensus 1299 ~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~ 1332 (1387)
T KOG1517|consen 1299 AHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL 1332 (1387)
T ss_pred eccccCccceeeeeccCCCeeeecCc-ceEEEEec
Confidence 22 234889999999999999988 99999987
No 225
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.08 E-value=1.5e-08 Score=64.24 Aligned_cols=107 Identities=21% Similarity=0.238 Sum_probs=73.7
Q ss_pred cceEcCCCCEEEeeec---CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEE-EEEeCCCc--EEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCLTGSY---DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKI-LTGSFDKT--LKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~--v~~wd~~~~~~~ 76 (113)
..+|+|+++.++..+. +..|++||+.+++.. .+..+...+...+|+ |++..+ ++.+.++. |.+||+.+++.
T Consensus 206 ~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~S-PDG~~la~~~~~~g~~~Iy~~d~~~~~~- 282 (435)
T PRK05137 206 TPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFS-PDGRKVVMSLSQGGNTDIYTMDLRSGTT- 282 (435)
T ss_pred eeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEEC-CCCCEEEEEEecCCCceEEEEECCCCce-
Confidence 3578999998877653 467999999877653 344456667788999 667655 46666655 66778877653
Q ss_pred eeecccccceEEEEEccCCCEEEEeec-CC--cEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSM-DH--TARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~ 112 (113)
..+..+........|+|+|+.++..+. ++ .|+++|+
T Consensus 283 ~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~ 321 (435)
T PRK05137 283 TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 321 (435)
T ss_pred EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence 444444445567899999998877654 33 5666664
No 226
>KOG4497|consensus
Probab=99.08 E-value=4.7e-10 Score=67.39 Aligned_cols=108 Identities=9% Similarity=0.102 Sum_probs=83.6
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
.++|+|+|+++++.+.- .+.+-|..+-+..+.+. --..|.-+.|.......+.....++.|.+|++...+...++...
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~-cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg 90 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFL-CLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG 90 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHH-HHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC
Confidence 57899999999999876 67788877665444333 34556778887444456777888999999999988877778777
Q ss_pred ccceEEEEEccCCCEE-EEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTF-CSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~-~~~~~~~~i~~~~~ 112 (113)
..++..++|||+|+.+ .+...+-.|.+|.+
T Consensus 91 ~agls~~~WSPdgrhiL~tseF~lriTVWSL 121 (447)
T KOG4497|consen 91 QAGLSSISWSPDGRHILLTSEFDLRITVWSL 121 (447)
T ss_pred CCcceeeeECCCcceEeeeecceeEEEEEEe
Confidence 7889999999999765 45666889999976
No 227
>KOG4547|consensus
Probab=99.06 E-value=6.9e-09 Score=65.90 Aligned_cols=101 Identities=18% Similarity=0.234 Sum_probs=84.5
Q ss_pred cCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccce
Q psy3639 7 TSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEV 86 (113)
Q Consensus 7 ~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v 86 (113)
+.+-..+.+++.|..+..|+..++.....++.....+..++.+ +++..+++++ +.|++||+.+++.+..+.+|.++|
T Consensus 111 ~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is-~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v 187 (541)
T KOG4547|consen 111 AQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCIS-PDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPV 187 (541)
T ss_pred ccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEc-CCCCEEEecc--ceEEEEEccCceEEEEecCCCcce
Confidence 4445578899999999999999999999998888999999999 7788888776 689999999999999999999999
Q ss_pred EEEEEccC-----CCEEEEe-ecCCcEEEe
Q psy3639 87 VGVTFSPD-----QSTFCSC-SMDHTARIF 110 (113)
Q Consensus 87 ~~~~~~~~-----~~~~~~~-~~~~~i~~~ 110 (113)
.+++|..+ |.+++++ ..+.-+.+|
T Consensus 188 ~t~~f~~~~~g~~G~~vLssa~~~r~i~~w 217 (541)
T KOG4547|consen 188 RTLSFTTLIDGIIGKYVLSSAAAERGITVW 217 (541)
T ss_pred EEEEEEEeccccccceeeeccccccceeEE
Confidence 99999876 6666554 334455555
No 228
>KOG4227|consensus
Probab=99.05 E-value=8.5e-09 Score=63.51 Aligned_cols=109 Identities=12% Similarity=0.119 Sum_probs=86.0
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeC--CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-c--cee
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRG--HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE-C--IQT 78 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~-~--~~~ 78 (113)
.+|+.....+.+|+.+++|...|+++.+.+.++.. ..+.|..+..+ |..+.+++.+.++.|.+||.+..+ . +..
T Consensus 111 L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~-P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~ 189 (609)
T KOG4227|consen 111 LEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQH-PTDNTLIVVTRAKLVSFIDNRDRQNPISLVL 189 (609)
T ss_pred EEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccC-CCCceEEEEecCceEEEEeccCCCCCCceee
Confidence 45566667899999999999999999888877752 23479999999 557889999999999999998764 2 222
Q ss_pred ecccccceEEEEEcc-CCCEEEEeecCCcEEEeecC
Q psy3639 79 YRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.......+.+.|+| ...++++.+..+.+-+||.+
T Consensus 190 ~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R 225 (609)
T KOG4227|consen 190 PANSGKNFYTAEFHPETPALILVNSETGGPNVFDRR 225 (609)
T ss_pred ecCCCccceeeeecCCCceeEEeccccCCCCceeec
Confidence 333445678899999 56778899999999999975
No 229
>KOG1240|consensus
Probab=99.05 E-value=2.5e-09 Score=73.07 Aligned_cols=87 Identities=24% Similarity=0.389 Sum_probs=71.1
Q ss_pred eeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-------ccceeecccccceEEEEEccCCCE
Q psy3639 25 WDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-------ECIQTYRGHSAEVVGVTFSPDQST 97 (113)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ 97 (113)
|+.+ |..+..+..|...+..++.+++.+.++++|+.||+|++||.+.. +...++...+.++..+...+.++.
T Consensus 1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCcc-ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 5543 77888888899999999999787799999999999999998643 222334434567888999999999
Q ss_pred EEEeecCCcEEEeec
Q psy3639 98 FCSCSMDHTARIFNT 112 (113)
Q Consensus 98 ~~~~~~~~~i~~~~~ 112 (113)
+++++.||.|.+.++
T Consensus 1113 ~Av~t~DG~v~~~~i 1127 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRI 1127 (1431)
T ss_pred EEEEcCCCeEEEEEc
Confidence 999999999999876
No 230
>KOG1524|consensus
Probab=99.05 E-value=3.8e-09 Score=67.14 Aligned_cols=106 Identities=13% Similarity=0.232 Sum_probs=78.5
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee-
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY- 79 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~- 79 (113)
+.|++|.|+.+.++.+.. +.+.+=.+.....+-..+.|.+-|.++.|+ +...++++|++|-..++||.... .++.-
T Consensus 148 v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~-~~s~lI~sgGED~kfKvWD~~G~-~Lf~S~ 224 (737)
T KOG1524|consen 148 IRCARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWRAHDGLVLSLSWS-TQSNIIASGGEDFRFKIWDAQGA-NLFTSA 224 (737)
T ss_pred eEEEEECCCCCceEEecC-CeEEEeecccccceeEEeccCcEEEEeecC-ccccceeecCCceeEEeecccCc-ccccCC
Confidence 357889998876665543 457777777677777888999999999999 77899999999999999994211 11111
Q ss_pred ----------------------------cccccceEEEEEccCCCEEEEeecCCcEEE
Q psy3639 80 ----------------------------RGHSAEVVGVTFSPDQSTFCSCSMDHTARI 109 (113)
Q Consensus 80 ----------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 109 (113)
+...+.|.+++||+||..+++|+..|.+.+
T Consensus 225 ~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 225 AEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred hhccceeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 123467788888888888888887776643
No 231
>KOG3914|consensus
Probab=99.04 E-value=1.2e-09 Score=66.51 Aligned_cols=75 Identities=24% Similarity=0.356 Sum_probs=62.7
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEe-eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTY-RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
-++++|++++++++..|..|++-.......+..+ -||+..|..+++- + +..+++++.|+++++||+.+++.+.++
T Consensus 156 dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~-~-~~~LlS~sGD~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 156 DVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLT-D-NYLLLSGSGDKTLRLWDITSGKLLDTC 231 (390)
T ss_pred eeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeec-c-CceeeecCCCCcEEEEecccCCccccc
Confidence 3578999999999999999999887655555544 4699999999986 3 566899999999999999999877655
No 232
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.04 E-value=1e-07 Score=59.43 Aligned_cols=107 Identities=15% Similarity=0.186 Sum_probs=74.3
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEe-CCCcEEEEeCCccccceeeccc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS-FDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
..++|+++++++++.|+.|.++|+.+.+.+.++.. ......++++ ++++++++++ ..+.+.++|.++.+.+..+...
T Consensus 42 ~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~~~~i~~s-~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~ 119 (369)
T PF02239_consen 42 LKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-GGNPRGIAVS-PDGKYVYVANYEPGTVSVIDAETLEPVKTIPTG 119 (369)
T ss_dssp EE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEEEE---TTTEEEEEEEETTEEEEEETTT--EEEEEE--
T ss_pred EEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-CCCcceEEEc-CCCCEEEEEecCCCceeEeccccccceeecccc
Confidence 35789999999999999999999999999999884 4456889999 7888877655 6889999999998887766532
Q ss_pred -------ccceEEEEEccCCCEEEEeec-CCcEEEeec
Q psy3639 83 -------SAEVVGVTFSPDQSTFCSCSM-DHTARIFNT 112 (113)
Q Consensus 83 -------~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~ 112 (113)
+.++..+.-+|....+++.-. .+.|.+.|.
T Consensus 120 ~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy 157 (369)
T PF02239_consen 120 GMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDY 157 (369)
T ss_dssp EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEET
T ss_pred cccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEe
Confidence 345677777887775555544 467766663
No 233
>KOG4714|consensus
Probab=99.03 E-value=4.7e-10 Score=65.36 Aligned_cols=72 Identities=21% Similarity=0.374 Sum_probs=63.0
Q ss_pred CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-cceeecccccceEEEEEcc-CCCEEEEeecCCcEEEeec
Q psy3639 41 NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE-CIQTYRGHSAEVVGVTFSP-DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 41 ~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~ 112 (113)
..+.+++-+|...+.++.|+.+|.+-+||.+... ....++.|+.+++.+-|+| ++..|+++++||.+.-||.
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence 3488999998888889999999999999998874 4456778999999999999 8889999999999999985
No 234
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.01 E-value=1.5e-08 Score=64.70 Aligned_cols=71 Identities=20% Similarity=0.261 Sum_probs=59.2
Q ss_pred CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 39 HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 39 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
....+.+.+++ +....++.|+.||.|.+||...+..... ...-....++|+|+|..+++++..|.+.+||+
T Consensus 258 L~s~v~~ca~s-p~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ 328 (545)
T PF11768_consen 258 LPSQVICCARS-PSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDM 328 (545)
T ss_pred cCCcceEEecC-cccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence 66788999999 7789999999999999999877643332 22334578999999999999999999999996
No 235
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.01 E-value=4.6e-08 Score=62.06 Aligned_cols=105 Identities=15% Similarity=0.091 Sum_probs=68.6
Q ss_pred cceEcCCCCEEEeee---cCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEE-EeCCC--cEEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCLTGS---YDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILT-GSFDK--TLKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~---~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~--~v~~wd~~~~~~~ 76 (113)
..+|+|+|+.++..+ .+..+.+|++.+++.... ...........|+ |+++.++. ...+| .|.+||+.+++..
T Consensus 203 ~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~S-PDG~~La~~~~~~g~~~I~~~d~~tg~~~ 280 (429)
T PRK03629 203 SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFS-PDGSKLAFALSKTGSLNLYVMDLASGQIR 280 (429)
T ss_pred eeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEEC-CCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence 467999999887543 245688999987754332 2233334568899 67776654 44455 4888899877643
Q ss_pred eeecccccceEEEEEccCCCEEEEeecC-CcEEEe
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMD-HTARIF 110 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~ 110 (113)
.+......+....|+|+|+.++..+.+ +...+|
T Consensus 281 -~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy 314 (429)
T PRK03629 281 -QVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVY 314 (429)
T ss_pred -EccCCCCCcCceEECCCCCEEEEEeCCCCCceEE
Confidence 333334456788999999988766653 444444
No 236
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.01 E-value=2.6e-08 Score=63.10 Aligned_cols=106 Identities=17% Similarity=0.205 Sum_probs=69.9
Q ss_pred cceEcCCCCEEEeeec---CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCCcEEEEe--CCccccc
Q psy3639 3 VPRVTSSPQRCLTGSY---DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDKTLKLWA--SAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~v~~wd--~~~~~~~ 76 (113)
..+|+|+++.++..+. ...|.+||+.+++... +...........|+ |++..++ +.+.++...+|. ...+. .
T Consensus 200 ~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~S-PDG~~la~~~~~~g~~~Iy~~d~~~~~-~ 276 (427)
T PRK02889 200 SPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWS-PDGRTLAVALSRDGNSQIYTVNADGSG-L 276 (427)
T ss_pred cceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEEC-CCCCEEEEEEccCCCceEEEEECCCCC-c
Confidence 4579999998886654 2458999998876543 33234456688999 6776664 667788766665 44333 4
Q ss_pred eeecccccceEEEEEccCCCEEEEeec-CCcEEEee
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSM-DHTARIFN 111 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~ 111 (113)
..+..+........|+|||+.++..+. ++...+|.
T Consensus 277 ~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~ 312 (427)
T PRK02889 277 RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYR 312 (427)
T ss_pred EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEE
Confidence 444434444566789999998876554 45555654
No 237
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.99 E-value=1.4e-08 Score=64.35 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=65.9
Q ss_pred cceEcCCCCEEEee-ecCCeEEEe--eCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCCcEEEEeCCcc-ccce
Q psy3639 3 VPRVTSSPQRCLTG-SYDRTCKLW--DIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDKTLKLWASAKE-ECIQ 77 (113)
Q Consensus 3 ~~~~~~~~~~~~~~-~~d~~v~i~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~v~~wd~~~~-~~~~ 77 (113)
..+|+|+++.++.+ +.++.+.+| |..++. ...+..+...+....|+ +++..++ +...++..++|++... ....
T Consensus 252 ~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wS-pDG~~i~f~s~~~g~~~I~~~~~~~~~~~ 329 (429)
T PRK01742 252 APAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWS-PDGQSILFTSDRSGSPQVYRMSASGGGAS 329 (429)
T ss_pred ceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEEC-CCCCEEEEEECCCCCceEEEEECCCCCeE
Confidence 35799999988765 457765555 665554 34455566677889999 6777655 4456788888876432 1122
Q ss_pred eecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+ .+.. ...+|+|+|+.++..+.++ +.+||+
T Consensus 330 ~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl 360 (429)
T PRK01742 330 LV-GGRG--YSAQISADGKTLVMINGDN-VVKQDL 360 (429)
T ss_pred Ee-cCCC--CCccCCCCCCEEEEEcCCC-EEEEEC
Confidence 22 2222 3467888888887776654 444665
No 238
>KOG4714|consensus
Probab=98.98 E-value=2.7e-09 Score=62.32 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=76.8
Q ss_pred cceEcCCC-CEEEeeecCCeEEEeeCCCCe-eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc------
Q psy3639 3 VPRVTSSP-QRCLTGSYDRTCKLWDIKSGH-EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE------ 74 (113)
Q Consensus 3 ~~~~~~~~-~~~~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~------ 74 (113)
+.|-+|.. +.+++|++||.+.+||.+... +...++.|+.++..+-|+|.++..+.++++||.+-.||..+..
T Consensus 184 ~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~l~i~~~ 263 (319)
T KOG4714|consen 184 ALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTFLSISNQ 263 (319)
T ss_pred hhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCceEEecCc
Confidence 44556655 577789999999999998764 3445677999999999999999999999999999999975321
Q ss_pred -----------ccee-------ecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 75 -----------CIQT-------YRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 75 -----------~~~~-------~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.... +......|++ |.-.|..+++|+.-+.|++.+
T Consensus 264 ~s~~s~WLsgD~v~s~i~i~~ll~~~~~Sins--fDV~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 264 ASVISSWLSGDPVKSRIEITSLLPSRSLSINS--FDVLGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred cccccccccCCcccceEeeeccccccceeeee--eeccCceEEeccccceEEEec
Confidence 0111 0001112332 333677899999889998875
No 239
>KOG3881|consensus
Probab=98.97 E-value=1.8e-08 Score=61.55 Aligned_cols=105 Identities=13% Similarity=0.224 Sum_probs=81.9
Q ss_pred CCCEEEeeecC--CeEEEeeCCCCeeeEEeeCC---------CCeEEEEEEcCCC-CCEEEEEeCCCcEEEEeCCcc-cc
Q psy3639 9 SPQRCLTGSYD--RTCKLWDIKSGHEICTYRGH---------QNVVYAVAFSEPY-GDKILTGSFDKTLKLWASAKE-EC 75 (113)
Q Consensus 9 ~~~~~~~~~~d--~~v~i~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~-~~~~~~~~~~~~v~~wd~~~~-~~ 75 (113)
...++++|+.. ..+.+||+...+.++.-+.- .-.++++.|-|+. ...|++++.-+.+++||.+.+ ++
T Consensus 160 ~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP 239 (412)
T KOG3881|consen 160 DPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP 239 (412)
T ss_pred CCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc
Confidence 34577789988 78999999877554433211 1234677777331 678999999999999999876 56
Q ss_pred ceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 76 IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 76 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+.++...+.++.++...|.+++++++...+.+..||++
T Consensus 240 V~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r 277 (412)
T KOG3881|consen 240 VAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLR 277 (412)
T ss_pred eeEeccccCcceeeeecCCCcEEEEecccchhheeccc
Confidence 77777778899999999999999999999999999975
No 240
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.97 E-value=7.3e-08 Score=61.22 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=70.5
Q ss_pred ceEcCCCCEEEeeec---CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEE-EEEeCCC--cEEEEeCCccccce
Q psy3639 4 PRVTSSPQRCLTGSY---DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKI-LTGSFDK--TLKLWASAKEECIQ 77 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~--~v~~wd~~~~~~~~ 77 (113)
.+|+|+++.++..+. ...+++||+.+++... +..........+|+ ++++.+ ++.+.+| .|.+||+.+++. .
T Consensus 209 p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~S-pDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~ 285 (433)
T PRK04922 209 PAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFS-PDGRRLALTLSRDGNPEIYVMDLGSRQL-T 285 (433)
T ss_pred ccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceEC-CCCCEEEEEEeCCCCceEEEEECCCCCe-E
Confidence 578999998887653 3469999998776533 33334445678999 667655 4555555 588899987763 3
Q ss_pred eecccccceEEEEEccCCCEEEEeec-CCc--EEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSM-DHT--ARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~--i~~~~~ 112 (113)
.+..+.......+|+|+|+.++..+. ++. ++++|+
T Consensus 286 ~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl 323 (433)
T PRK04922 286 RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAA 323 (433)
T ss_pred ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 44434444567899999998877654 444 555553
No 241
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.95 E-value=1.3e-07 Score=60.07 Aligned_cols=106 Identities=10% Similarity=0.025 Sum_probs=68.6
Q ss_pred ceEcCCCCEEEee-ecCC--eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-CCcEEEE--eCCccccce
Q psy3639 4 PRVTSSPQRCLTG-SYDR--TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-DKTLKLW--ASAKEECIQ 77 (113)
Q Consensus 4 ~~~~~~~~~~~~~-~~d~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~v~~w--d~~~~~~~~ 77 (113)
..|+|+++.++.. +.++ .|++||+.+++.... ..+...+....|+ |+++.++..+. ++...+| |+.+++. .
T Consensus 248 ~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~l-t~~~~~~~~~~wS-PDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~ 324 (429)
T PRK03629 248 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWF-PDSQNLAYTSDQAGRPQVYKVNINGGAP-Q 324 (429)
T ss_pred eEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEc-cCCCCCcCceEEC-CCCCEEEEEeCCCCCceEEEEECCCCCe-E
Confidence 5799999977754 4344 588899987765443 3344567889999 77877665554 4554555 6655542 3
Q ss_pred eecccccceEEEEEccCCCEEEEeecC---CcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMD---HTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~ 112 (113)
.+...........|+|+|++++..+.+ ..+.+||+
T Consensus 325 ~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl 362 (429)
T PRK03629 325 RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 362 (429)
T ss_pred EeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEEC
Confidence 333333345568899999998776543 34777775
No 242
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.94 E-value=1.3e-07 Score=59.60 Aligned_cols=106 Identities=17% Similarity=0.171 Sum_probs=69.0
Q ss_pred ceEcCCCCEEEeeecC---CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCC--cEEEEeCCccccce
Q psy3639 4 PRVTSSPQRCLTGSYD---RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDK--TLKLWASAKEECIQ 77 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~--~v~~wd~~~~~~~~ 77 (113)
.+|+|+++.++..... ..|++|++.+++.... ..+.......+|+ +++..++ +.+.++ .+.+||+.+++. .
T Consensus 195 p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~~~s-pDg~~l~~~~~~~~~~~i~~~d~~~~~~-~ 271 (417)
T TIGR02800 195 PAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAPAFS-PDGSKLAVSLSKDGNPDIYVMDLDGKQL-T 271 (417)
T ss_pred ccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccceEEC-CCCCEEEEEECCCCCccEEEEECCCCCE-E
Confidence 4689999988876543 4799999988754432 3345556678899 6676554 555444 588888877643 3
Q ss_pred eecccccceEEEEEccCCCEEEEeec-CC--cEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSM-DH--TARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~ 112 (113)
.+..+........|+|+|+.++..+. ++ .|+++|+
T Consensus 272 ~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~ 309 (417)
T TIGR02800 272 RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDA 309 (417)
T ss_pred ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence 33333333446789999998876554 33 4666664
No 243
>KOG2695|consensus
Probab=98.90 E-value=1.7e-08 Score=61.13 Aligned_cols=107 Identities=15% Similarity=0.239 Sum_probs=81.6
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCC-----eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc---ce
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSG-----HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC---IQ 77 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~---~~ 77 (113)
|...++++..|..+|.|..+|++.+ .+.+.+. |...++++..---.++.+++.+.+|+|.+||++--++ +.
T Consensus 260 f~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~ 338 (425)
T KOG2695|consen 260 FAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVM 338 (425)
T ss_pred hcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhhhccccee
Confidence 4556789999999999999999865 3455555 8888998887633678899999999999999987766 78
Q ss_pred eecccccceEE--EEEccCCCEEEEeecCCcEEEeecC
Q psy3639 78 TYRGHSAEVVG--VTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 78 ~~~~~~~~v~~--~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
++.+|.....- +-..+....++++++|=-.+||.++
T Consensus 339 qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~ 376 (425)
T KOG2695|consen 339 QYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD 376 (425)
T ss_pred eeecccccccccccccccccceEEEccCeeEEEEEecc
Confidence 88877432221 2234556677788899999999764
No 244
>KOG3621|consensus
Probab=98.90 E-value=2.3e-08 Score=65.11 Aligned_cols=109 Identities=13% Similarity=0.149 Sum_probs=82.8
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEee-CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce----
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYR-GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ---- 77 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~---- 77 (113)
..|++.++++++.|+..|.+++|+-..++....-. +....+....++ +...+++.|+..|.|.++.+....+-.
T Consensus 38 lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs-~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~ 116 (726)
T KOG3621|consen 38 LTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVS-SVEYLVAAGTASGRVSVFQLNKELPRDLDYV 116 (726)
T ss_pred EEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEec-chhHhhhhhcCCceEEeehhhccCCCcceee
Confidence 45788899999999999999999987776543333 233445555566 778899999999999999876643211
Q ss_pred -ee-cccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 78 -TY-RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 78 -~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.. +.|...|.++.|++++..+.+|...|+|..-.+
T Consensus 117 t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L 153 (726)
T KOG3621|consen 117 TPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTEL 153 (726)
T ss_pred ccccccCCceEEEEEecccccEEeecCCCceEEEEEe
Confidence 11 235678999999999999999999999987644
No 245
>KOG3914|consensus
Probab=98.89 E-value=1.7e-08 Score=61.74 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=62.9
Q ss_pred EeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec-ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 35 TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR-GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 35 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+-+|-.-+++++++ ++++.++++..|+.|++-.......+.++- +|+.-|..++.-+ +..|++++.|+++++||++
T Consensus 146 ~~lGhvSml~dVavS-~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~tlr~Wd~~ 223 (390)
T KOG3914|consen 146 PILGHVSMLLDVAVS-PDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGDKTLRLWDIT 223 (390)
T ss_pred hhhhhhhhhheeeec-CCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCCCcEEEEecc
Confidence 344688889999999 888999999999999997766554455443 5888899998865 4568999999999999974
No 246
>KOG1963|consensus
Probab=98.89 E-value=1e-07 Score=63.13 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=86.9
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
+.+..|+++|.++++|+..+.+.+|.+.+++ .+-+..-.+++..+.++ +++...+....|+.|.+-...+.....+..
T Consensus 254 V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS-~ds~~~sl~~~DNqI~li~~~dl~~k~tIs 331 (792)
T KOG1963|consen 254 VNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVS-PDSDLYSLVLEDNQIHLIKASDLEIKSTIS 331 (792)
T ss_pred cceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEc-CCCCeEEEEecCceEEEEeccchhhhhhcc
Confidence 3567899999999999999999999999988 33444477899999999 888888889999999998776654433332
Q ss_pred cc-----------ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 81 GH-----------SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 81 ~~-----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+. .+-...++++|..+.++-.+..+++.+||+
T Consensus 332 gi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl 374 (792)
T KOG1963|consen 332 GIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDL 374 (792)
T ss_pred CccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEec
Confidence 21 223467888997777888888999999986
No 247
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.89 E-value=6.3e-07 Score=53.08 Aligned_cols=30 Identities=13% Similarity=0.329 Sum_probs=27.9
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...|..+..||+|..|++.+.+|.|.+|++
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~i 258 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEI 258 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEec
Confidence 457899999999999999999999999986
No 248
>KOG1334|consensus
Probab=98.89 E-value=7.9e-09 Score=64.79 Aligned_cols=111 Identities=22% Similarity=0.349 Sum_probs=87.6
Q ss_pred CCcceEcCCCCEEEeeecCCeEEEeeCCC--C----------eee-EEeeCCCC--eEEEEEEcCCCCCEEEEEeCCCcE
Q psy3639 1 MGVPRVTSSPQRCLTGSYDRTCKLWDIKS--G----------HEI-CTYRGHQN--VVYAVAFSEPYGDKILTGSFDKTL 65 (113)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~d~~v~i~~~~~--~----------~~~-~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~v 65 (113)
|++.+++.++.-++++-.|..|++++..- + ..+ ..+++|.. .|..+-|--|...++++|+.-|.|
T Consensus 339 ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhI 418 (559)
T KOG1334|consen 339 ITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHI 418 (559)
T ss_pred ceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceE
Confidence 45667786666556555677788886432 2 112 23778754 477787766778999999999999
Q ss_pred EEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 66 KLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 66 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.+|+-.+++.+.-+.+...-|+++.-+|.--.|++++.|..|+||-
T Consensus 419 FiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWT 464 (559)
T KOG1334|consen 419 FIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWT 464 (559)
T ss_pred EEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeec
Confidence 9999999999999998878899999999888999999999999995
No 249
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.88 E-value=2.5e-07 Score=58.82 Aligned_cols=107 Identities=15% Similarity=0.123 Sum_probs=68.9
Q ss_pred cceEcCCCCEEE-eeecCC--eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEe-CCCc--EEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCL-TGSYDR--TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS-FDKT--LKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~-~~~~d~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~--v~~wd~~~~~~~ 76 (113)
..+|+|+++.++ +.+.++ .|++||+.+++.. .+..+.......+|+ ++++.++..+ .+|. +.++|+.+++.
T Consensus 252 ~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~s-pDG~~l~f~sd~~g~~~iy~~dl~~g~~- 328 (433)
T PRK04922 252 APSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWA-PDGKSIYFTSDRGGRPQIYRVAASGGSA- 328 (433)
T ss_pred CceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEEC-CCCCEEEEEECCCCCceEEEEECCCCCe-
Confidence 357999998765 444444 5899999877643 344454455678999 6777766554 4454 55566665542
Q ss_pred eeecccccceEEEEEccCCCEEEEeecCC---cEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMDH---TARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~i~~~~~ 112 (113)
..+..........+|+|+|+.++..+.++ .|.+||+
T Consensus 329 ~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~ 367 (433)
T PRK04922 329 ERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDL 367 (433)
T ss_pred EEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEEC
Confidence 22222223344689999999988765433 5888886
No 250
>KOG2041|consensus
Probab=98.88 E-value=2.6e-08 Score=65.55 Aligned_cols=107 Identities=16% Similarity=0.216 Sum_probs=86.9
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCC---------------eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEE
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSG---------------HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLK 66 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~---------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ 66 (113)
.|+.|+....++++|+.||.+++-.+.+. ..-+++++|...|.-+.|+ .+.+.+-+...+|.|.
T Consensus 18 ~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWN-e~~QKLTtSDt~GlIi 96 (1189)
T KOG2041|consen 18 HCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWN-ENNQKLTTSDTSGLII 96 (1189)
T ss_pred EEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEec-cccccccccCCCceEE
Confidence 56788888999999999999999876542 1235778999999999999 7788889999999999
Q ss_pred EEeCCccccceeec--ccccceEEEEEccCCCEEEEeecCCcEEE
Q psy3639 67 LWASAKEECIQTYR--GHSAEVVGVTFSPDQSTFCSCSMDHTARI 109 (113)
Q Consensus 67 ~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 109 (113)
+|-+-.+.....+. ..++.|.+++|+.+|..++....||.|.+
T Consensus 97 VWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV 141 (1189)
T KOG2041|consen 97 VWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV 141 (1189)
T ss_pred EEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence 99887765554433 34567889999999999998888887754
No 251
>KOG1064|consensus
Probab=98.85 E-value=4e-08 Score=69.83 Aligned_cols=106 Identities=20% Similarity=0.348 Sum_probs=84.4
Q ss_pred cCCCCEEEeeecCCeEEEeeCCCCeeeEEeeC-CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-----cc-----
Q psy3639 7 TSSPQRCLTGSYDRTCKLWDIKSGHEICTYRG-HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-----EC----- 75 (113)
Q Consensus 7 ~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-----~~----- 75 (113)
+|...++++|+.||.+++|....+..+..++. ....++.+.|+ .+|+.+..+..||.+.+|..... ++
T Consensus 2217 Hp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~-~qGnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~ 2295 (2439)
T KOG1064|consen 2217 HPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFN-HQGNKFGIVDGDGDLSLWQASPKPYTSWQCHNKAL 2295 (2439)
T ss_pred CCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhc-ccCCceeeeccCCceeecccCCcceeccccCCccc
Confidence 56677999999999999999887777766653 33778899999 88999999999999999975311 00
Q ss_pred ---------------------------------ceeecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 76 ---------------------------------IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 76 ---------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
-.....|.+.+..+++.|....+++|+.+|.+++||++
T Consensus 2296 ~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~r 2366 (2439)
T KOG1064|consen 2296 SDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIR 2366 (2439)
T ss_pred cceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehH
Confidence 00013577888999999999999999999999999975
No 252
>KOG1275|consensus
Probab=98.85 E-value=6.3e-08 Score=64.94 Aligned_cols=103 Identities=13% Similarity=0.214 Sum_probs=82.2
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC---------CCcEEEEeCCccccc
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF---------DKTLKLWASAKEECI 76 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~~v~~wd~~~~~~~ 76 (113)
+-.+++.+.+|...|+|.+-|..+.+.++++..|.+.+.++... |+.+++++. |..|++||++..+.+
T Consensus 183 mR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~---GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral 259 (1118)
T KOG1275|consen 183 MRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQ---GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRAL 259 (1118)
T ss_pred EEecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeecc---CCeEEEeecccccccccccchhhhhhhhhhhcc
Confidence 44567889999999999999999999999999999999998876 888888876 445889997654321
Q ss_pred eee----------------------------------------------cccccceEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 77 QTY----------------------------------------------RGHSAEVVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 77 ~~~----------------------------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
..+ ......+..++++++|+.++.+..+|.|.+|
T Consensus 260 ~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~w 339 (1118)
T KOG1275|consen 260 SPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLW 339 (1118)
T ss_pred CCcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeee
Confidence 111 1123347888999999999999999999999
Q ss_pred e
Q psy3639 111 N 111 (113)
Q Consensus 111 ~ 111 (113)
.
T Consensus 340 a 340 (1118)
T KOG1275|consen 340 A 340 (1118)
T ss_pred c
Confidence 5
No 253
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.83 E-value=5.9e-07 Score=57.41 Aligned_cols=107 Identities=18% Similarity=0.108 Sum_probs=67.3
Q ss_pred cceEcCCCCEEEeeec-C--CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCCc--EEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCLTGSY-D--RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDKT--LKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~-d--~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~--v~~wd~~~~~~~ 76 (113)
...|+|+++.++..+. + ..|+++|+.+++... +...........|+ |+++.++ +.+.++. |.++|+.+++.
T Consensus 222 ~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wS-PDG~~La~~~~~~g~~~Iy~~dl~tg~~- 298 (448)
T PRK04792 222 SPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFS-PDGKKLALVLSKDGQPEIYVVDIATKAL- 298 (448)
T ss_pred CceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeEC-CCCCEEEEEEeCCCCeEEEEEECCCCCe-
Confidence 4579999998876543 3 358888988776432 22223334567899 6677554 5666665 77778877653
Q ss_pred eeecccccceEEEEEccCCCEEEEeec-CC--cEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSM-DH--TARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~ 112 (113)
..+..+........|+|+|+.++..+. ++ .|+++|+
T Consensus 299 ~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl 337 (448)
T PRK04792 299 TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNL 337 (448)
T ss_pred EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 333334444567899999998876554 33 3555453
No 254
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.82 E-value=5.3e-07 Score=57.25 Aligned_cols=106 Identities=19% Similarity=0.151 Sum_probs=68.2
Q ss_pred ceEcCCCCEEEeeecC---CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCC--cEEEEeCCccccce
Q psy3639 4 PRVTSSPQRCLTGSYD---RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDK--TLKLWASAKEECIQ 77 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d---~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~--~v~~wd~~~~~~~~ 77 (113)
..|+|+++.++..+.+ ..|.+|++.+++... +...........|+ |+++.++ +...+| .|.++|+.+++. .
T Consensus 204 p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~S-pDG~~la~~~~~~g~~~Iy~~d~~~~~~-~ 280 (430)
T PRK00178 204 PRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWS-PDGSKLAFVLSKDGNPEIYVMDLASRQL-S 280 (430)
T ss_pred eeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEEC-CCCCEEEEEEccCCCceEEEEECCCCCe-E
Confidence 4789999988765433 468889998776433 22233445578899 6777655 555555 577789887653 3
Q ss_pred eecccccceEEEEEccCCCEEEEeec-CC--cEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSM-DH--TARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~ 112 (113)
.+..+........|+|+|+.++..+. ++ .|+++|+
T Consensus 281 ~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~ 318 (430)
T PRK00178 281 RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNV 318 (430)
T ss_pred EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEEC
Confidence 34334444556789999998766553 33 4555554
No 255
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.81 E-value=2.2e-07 Score=58.96 Aligned_cols=107 Identities=13% Similarity=0.085 Sum_probs=66.3
Q ss_pred cceEcCCCCEEE-eeecCCeEEEee--CCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEe-CCCcEEEEeC--Cccccc
Q psy3639 3 VPRVTSSPQRCL-TGSYDRTCKLWD--IKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS-FDKTLKLWAS--AKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~-~~~~d~~v~i~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~v~~wd~--~~~~~~ 76 (113)
...|+|+++.++ +.+.++...+|. ...+. ...+..+........|+ ++++.++..+ .++...+|.+ ..++ .
T Consensus 244 ~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wS-pDG~~l~f~s~~~g~~~Iy~~~~~~g~-~ 320 (427)
T PRK02889 244 APAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFS-PDGRSIYFTSDRGGAPQIYRMPASGGA-A 320 (427)
T ss_pred ceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEc-CCCCEEEEEecCCCCcEEEEEECCCCc-e
Confidence 457999998776 566677666665 44333 44454455555677899 6787666444 4566666654 3333 2
Q ss_pred eeecccccceEEEEEccCCCEEEEeecCC---cEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMDH---TARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~i~~~~~ 112 (113)
..+..........+|+|+|++++..+.++ .|.+||+
T Consensus 321 ~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~ 359 (427)
T PRK02889 321 QRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDL 359 (427)
T ss_pred EEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEEC
Confidence 22221223334578999999988766544 5888886
No 256
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.81 E-value=9.5e-07 Score=56.27 Aligned_cols=107 Identities=13% Similarity=0.166 Sum_probs=69.4
Q ss_pred cceEcCCCCEEE-eeecCCe--EEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEe-CCC--cEEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCL-TGSYDRT--CKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS-FDK--TLKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~-~~~~d~~--v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~--~v~~wd~~~~~~~ 76 (113)
..+|+|+++.++ +.+.++. |+++|+.+++. ..+..+........|+ ++++.++..+ .+| .|.++|+..++.
T Consensus 250 ~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~s-pDG~~i~f~s~~~g~~~Iy~~d~~g~~~- 326 (435)
T PRK05137 250 APRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYS-PDGSQIVFESDRSGSPQLYVMNADGSNP- 326 (435)
T ss_pred CcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEc-CCCCEEEEEECCCCCCeEEEEECCCCCe-
Confidence 357899998765 4555544 77778876654 3444455556778999 6777766554 333 577778766543
Q ss_pred eeecccccceEEEEEccCCCEEEEeecC---CcEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMD---HTARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~ 112 (113)
..+...........|+|+|+.++....+ ..|.++|+
T Consensus 327 ~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~ 365 (435)
T PRK05137 327 RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKP 365 (435)
T ss_pred EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEEC
Confidence 3333234445668899999998876543 35666664
No 257
>KOG0644|consensus
Probab=98.81 E-value=1.9e-08 Score=66.88 Aligned_cols=101 Identities=18% Similarity=0.284 Sum_probs=84.9
Q ss_pred EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEE
Q psy3639 12 RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTF 91 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~ 91 (113)
+.+++-.+..+++|++.++...+.+.+|...+..+.++|-+.....+++.||...+||+-.+.+++.+......+..-+|
T Consensus 367 ~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kF 446 (1113)
T KOG0644|consen 367 IVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKF 446 (1113)
T ss_pred cceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeecccc
Confidence 34444456677899999999999999999999999999888888899999999999999888776666544567778899
Q ss_pred ccCCCEEEEeecCCcEEEeec
Q psy3639 92 SPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 92 ~~~~~~~~~~~~~~~i~~~~~ 112 (113)
|++|..++.....|.++|...
T Consensus 447 Sqdgts~~lsd~hgql~i~g~ 467 (1113)
T KOG0644|consen 447 SQDGTSIALSDDHGQLYILGT 467 (1113)
T ss_pred CCCCceEecCCCCCceEEecc
Confidence 999999999888899988753
No 258
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.80 E-value=1.1e-06 Score=55.74 Aligned_cols=106 Identities=13% Similarity=0.218 Sum_probs=83.5
Q ss_pred eEcCCCCEEEeeecCC-eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 5 RVTSSPQRCLTGSYDR-TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~-~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
.+..+++-++.|..|| .+-+||..+++ +..+...-+.|.++..+ ++|..++.+.....+.+.|+.+++....-+...
T Consensus 366 r~~~~~e~~vigt~dgD~l~iyd~~~~e-~kr~e~~lg~I~av~vs-~dGK~~vvaNdr~el~vididngnv~~idkS~~ 443 (668)
T COG4946 366 RIQVDPEGDVIGTNDGDKLGIYDKDGGE-VKRIEKDLGNIEAVKVS-PDGKKVVVANDRFELWVIDIDNGNVRLIDKSEY 443 (668)
T ss_pred EEccCCcceEEeccCCceEEEEecCCce-EEEeeCCccceEEEEEc-CCCcEEEEEcCceEEEEEEecCCCeeEeccccc
Confidence 4455666788888888 88999988655 44666677889999999 889999999999999999999997544444456
Q ss_pred cceEEEEEccCCCEEEEeec----CCcEEEeec
Q psy3639 84 AEVVGVTFSPDQSTFCSCSM----DHTARIFNT 112 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~----~~~i~~~~~ 112 (113)
+-|..+.|+|++++++=+-- -..|+++|+
T Consensus 444 ~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm 476 (668)
T COG4946 444 GLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDM 476 (668)
T ss_pred ceeEEEEEcCCceeEEEecCcceeeeeEEEEec
Confidence 67899999999999875533 357888876
No 259
>KOG4532|consensus
Probab=98.79 E-value=1.1e-06 Score=51.94 Aligned_cols=111 Identities=11% Similarity=-0.025 Sum_probs=78.3
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCe--eeE-EeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccc--
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGH--EIC-TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECI-- 76 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~--~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~-- 76 (113)
+-+++++++++.++.++...|..|.++... .+. ........-.+..|+ .+...++++..||++.+||++.....
T Consensus 162 ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s-~~~~~FAv~~Qdg~~~I~DVR~~~tpm~ 240 (344)
T KOG4532|consen 162 NSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFS-ENDLQFAVVFQDGTCAIYDVRNMATPMA 240 (344)
T ss_pred eeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeec-cCcceEEEEecCCcEEEEEecccccchh
Confidence 346789999999999999999999886543 233 223344455778888 77889999999999999999875322
Q ss_pred ---eeecccccceEEEEEccCCC--EEEEeecCCcEEEeecC
Q psy3639 77 ---QTYRGHSAEVVGVTFSPDQS--TFCSCSMDHTARIFNTM 113 (113)
Q Consensus 77 ---~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~i~~~~~~ 113 (113)
.+...|++.+..+.|++-|. .|+..-.-+.+++.|+|
T Consensus 241 ~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R 282 (344)
T KOG4532|consen 241 EISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR 282 (344)
T ss_pred hhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcc
Confidence 23344788899999998543 33333334567777664
No 260
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.78 E-value=1.1e-06 Score=55.42 Aligned_cols=107 Identities=12% Similarity=0.118 Sum_probs=69.6
Q ss_pred cceEcCCCCEEEe-eecC--CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-CC--cEEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCLT-GSYD--RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-DK--TLKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~-~~~d--~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~--~v~~wd~~~~~~~ 76 (113)
..+|+|+++.++. .+.+ ..|++|++.++... .+..+........|+ +++..++..+. .+ .|.++|+.+++.
T Consensus 238 ~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s-~dg~~l~~~s~~~g~~~iy~~d~~~~~~- 314 (417)
T TIGR02800 238 APAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWS-PDGKSIAFTSDRGGSPQIYMMDADGGEV- 314 (417)
T ss_pred ceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEEC-CCCCEEEEEECCCCCceEEEEECCCCCE-
Confidence 3578999986664 4443 35888898866543 333344444567888 67777665443 33 477778776553
Q ss_pred eeecccccceEEEEEccCCCEEEEeecCC---cEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMDH---TARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~i~~~~~ 112 (113)
..+...........|+|+|++++..+.++ .|.++|+
T Consensus 315 ~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~ 353 (417)
T TIGR02800 315 RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDL 353 (417)
T ss_pred EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeC
Confidence 33333445566789999999998877765 6777775
No 261
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.77 E-value=7.8e-08 Score=61.54 Aligned_cols=67 Identities=19% Similarity=0.245 Sum_probs=55.8
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA 71 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~ 71 (113)
.+++.+|+.+.++.|+.||.|.+||...+....+ ...-..+.++|+ |++..+++|+..|.+.+||+.
T Consensus 263 ~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWH-p~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 263 ICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWH-PDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred eEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEc-CCCcEEEEEcCCceEEEEEee
Confidence 4678899999999999999999999876543322 244557899999 889999999999999999963
No 262
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.76 E-value=1.1e-06 Score=61.29 Aligned_cols=109 Identities=13% Similarity=0.164 Sum_probs=75.9
Q ss_pred ceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeC---------------------CCCeEEEEEEcCCCCCEEEEEeC
Q psy3639 4 PRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRG---------------------HQNVVYAVAFSEPYGDKILTGSF 61 (113)
Q Consensus 4 ~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~~~~~~~~ 61 (113)
++++|+++ ++++-..++.|++||+.++.......+ .......+++. +++..+++-..
T Consensus 745 IavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd-~dG~LYVADs~ 823 (1057)
T PLN02919 745 ISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCA-KDGQIYVADSY 823 (1057)
T ss_pred EEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEe-CCCcEEEEECC
Confidence 56788887 556667779999999887653211100 01123578888 67888888888
Q ss_pred CCcEEEEeCCccccceeec-------------ccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 62 DKTLKLWASAKEECIQTYR-------------GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 62 ~~~v~~wd~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
++.|++||..++....... +.-.....++++++|+.+++-+.++.|++||++
T Consensus 824 N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~ 888 (1057)
T PLN02919 824 NHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLN 888 (1057)
T ss_pred CCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 9999999987765332111 111245789999999988888889999999973
No 263
>KOG1645|consensus
Probab=98.75 E-value=5.9e-08 Score=59.79 Aligned_cols=91 Identities=9% Similarity=0.112 Sum_probs=72.8
Q ss_pred EEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCC-CEEEE
Q psy3639 22 CKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQ-STFCS 100 (113)
Q Consensus 22 v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~ 100 (113)
+++.+..+-+..+.+.++...|.+++++|.+..++..++.+++|.+.|+++...+.++..+ ..+++.+|+-+. +++..
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA 253 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence 4455544455555556678889999999666557888999999999999999988888876 788999998754 56778
Q ss_pred eecCCcEEEeecC
Q psy3639 101 CSMDHTARIFNTM 113 (113)
Q Consensus 101 ~~~~~~i~~~~~~ 113 (113)
|...|.|.+||+|
T Consensus 254 Gl~nG~VlvyD~R 266 (463)
T KOG1645|consen 254 GLQNGMVLVYDMR 266 (463)
T ss_pred eccCceEEEEEcc
Confidence 8889999999986
No 264
>KOG1409|consensus
Probab=98.74 E-value=7e-08 Score=58.46 Aligned_cols=68 Identities=16% Similarity=0.383 Sum_probs=55.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCe-eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGH-EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWAS 70 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~ 70 (113)
.+.+|.+...++.++..|..+.+||+.-.+ ......+|...|..+..- +..+.+.+++.||.|.+||.
T Consensus 201 ~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~-~~t~~l~S~~edg~i~~w~m 269 (404)
T KOG1409|consen 201 TCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA-QHTRQLISCGEDGGIVVWNM 269 (404)
T ss_pred EEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh-hhheeeeeccCCCeEEEEec
Confidence 345788888999999999999999986543 345667888888888766 55688899999999999985
No 265
>KOG1354|consensus
Probab=98.74 E-value=5.6e-08 Score=58.99 Aligned_cols=108 Identities=15% Similarity=0.186 Sum_probs=77.1
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEE---eeCC-----CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICT---YRGH-----QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE 74 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~---~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~ 74 (113)
-+.++.+.+.++++. |-.|.+|+++-....+. ++.+ +.-|++..|+|...+.++..+..|+|++.|++...
T Consensus 169 SIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~a 247 (433)
T KOG1354|consen 169 SISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSA 247 (433)
T ss_pred eeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhh
Confidence 345677778888775 67899999864433222 2222 34578899998888999999999999999998532
Q ss_pred ------cceeec----------ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 75 ------CIQTYR----------GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 75 ------~~~~~~----------~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+.... +.-..|..+.|+++|+++++-+. -++++||+
T Consensus 248 LCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~ 300 (433)
T KOG1354|consen 248 LCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDL 300 (433)
T ss_pred hhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEec
Confidence 111111 12346788999999999887653 58999997
No 266
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.72 E-value=1.7e-06 Score=55.08 Aligned_cols=107 Identities=14% Similarity=0.151 Sum_probs=66.8
Q ss_pred ceEcCCCCEEEeee-cCCeEEEe--eCCC-CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-C--CcEEEEeCCccccc
Q psy3639 4 PRVTSSPQRCLTGS-YDRTCKLW--DIKS-GHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-D--KTLKLWASAKEECI 76 (113)
Q Consensus 4 ~~~~~~~~~~~~~~-~d~~v~i~--~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~--~~v~~wd~~~~~~~ 76 (113)
.+|+|+|+.++..+ .++...+| ++.. +.....+......+....|+ |+++.++.... + ..|.+||+.+++..
T Consensus 286 p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wS-PDG~~Laf~~~~~g~~~I~v~dl~~g~~~ 364 (428)
T PRK01029 286 PSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWS-PDGKKIAFCSVIKGVRQICVYDLATGRDY 364 (428)
T ss_pred eEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeEC-CCCCEEEEEEcCCCCcEEEEEECCCCCeE
Confidence 47899999777544 45654555 4432 22334444444556788999 77877765543 2 36889999887643
Q ss_pred eeecccccceEEEEEccCCCEEEEeec---CCcEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSM---DHTARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~~~~~ 112 (113)
.+......+....|+|+|+.++.... ...+.++|+
T Consensus 365 -~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 365 -QLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISL 402 (428)
T ss_pred -EccCCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 33322334567899999998875433 345777765
No 267
>KOG1409|consensus
Probab=98.69 E-value=3e-07 Score=55.82 Aligned_cols=82 Identities=20% Similarity=0.436 Sum_probs=69.6
Q ss_pred eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-cceeecccccceEEEEEccCCCEEEEeecCCcEEE
Q psy3639 31 HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE-CIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARI 109 (113)
Q Consensus 31 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 109 (113)
.++.++.+|...+.+++|. +....+.++..|..+.+||+.-.+ ....+.+|...|..+.+-+--+.+++++.||.|.+
T Consensus 188 ~~i~~~~~h~~~~~~l~Wd-~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~ 266 (404)
T KOG1409|consen 188 QLITTFNGHTGEVTCLKWD-PGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVV 266 (404)
T ss_pred ceEEEEcCcccceEEEEEc-CCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEE
Confidence 4567788999999999999 778899999999999999986543 24566678888888888887888999999999999
Q ss_pred eecC
Q psy3639 110 FNTM 113 (113)
Q Consensus 110 ~~~~ 113 (113)
|+++
T Consensus 267 w~mn 270 (404)
T KOG1409|consen 267 WNMN 270 (404)
T ss_pred Eecc
Confidence 9974
No 268
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.66 E-value=1.9e-06 Score=54.86 Aligned_cols=108 Identities=13% Similarity=0.156 Sum_probs=63.4
Q ss_pred ceEcCCCCEEEeeec-----CCeEEEeeCCCC---eeeEEeeCCCCeEEEEEEcCCCCCEEEEE-eCCCcEEEE--eCCc
Q psy3639 4 PRVTSSPQRCLTGSY-----DRTCKLWDIKSG---HEICTYRGHQNVVYAVAFSEPYGDKILTG-SFDKTLKLW--ASAK 72 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~-----d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~v~~w--d~~~ 72 (113)
.+|+|+|+.++..+. +..+..|++..+ +................|+ |++..++.. ..+|...+| ++..
T Consensus 236 p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wS-PDG~~Laf~s~~~g~~~ly~~~~~~ 314 (428)
T PRK01029 236 PTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFS-PDGTRLVFVSNKDGRPRIYIMQIDP 314 (428)
T ss_pred eEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEEC-CCCCEEEEEECCCCCceEEEEECcc
Confidence 478999987775442 223344676542 3233333222334567899 778766544 456655555 4432
Q ss_pred -cccceeecccccceEEEEEccCCCEEEEeecC---CcEEEeec
Q psy3639 73 -EECIQTYRGHSAEVVGVTFSPDQSTFCSCSMD---HTARIFNT 112 (113)
Q Consensus 73 -~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~ 112 (113)
+.....+......+....|+|+|+.++....+ ..|.+||+
T Consensus 315 ~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl 358 (428)
T PRK01029 315 EGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDL 358 (428)
T ss_pred cccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEEC
Confidence 22233343334456678999999988766543 36888876
No 269
>KOG3617|consensus
Probab=98.65 E-value=9.9e-08 Score=64.02 Aligned_cols=108 Identities=10% Similarity=0.119 Sum_probs=84.0
Q ss_pred CcceEcCCCCEEEeeec----CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce
Q psy3639 2 GVPRVTSSPQRCLTGSY----DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~----d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~ 77 (113)
.+..|+|...++++++. .|.|.||- ++|++-.... ..-.+++++|+ |....++.|-.-|.+.+|...+.+.-.
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWH-pe~~vLa~gwe~g~~~v~~~~~~e~ht 95 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWH-PEEFVLAQGWEMGVSDVQKTNTTETHT 95 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccC-hHHHHHhhccccceeEEEecCCceeee
Confidence 35678999998887764 47777774 4565433222 23345679999 667788899999999999987777656
Q ss_pred eecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
....|..++..+.||++|..++++..-|.+++|..
T Consensus 96 v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~ 130 (1416)
T KOG3617|consen 96 VVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRY 130 (1416)
T ss_pred eccCCCCCceeEEecCCCCeEEEcCCCceeEEEEe
Confidence 66678889999999999999999999999999964
No 270
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.62 E-value=6.3e-06 Score=52.43 Aligned_cols=107 Identities=10% Similarity=-0.014 Sum_probs=66.1
Q ss_pred cceEcCCCCEEE-eeecCC--eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEe-CCC--cEEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCL-TGSYDR--TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS-FDK--TLKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~-~~~~d~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~--~v~~wd~~~~~~~ 76 (113)
..+|+|+++.++ +...++ .|+++|+.+++.. .+..+........|+ +++..++..+ .++ .|.++|+.+++.
T Consensus 247 ~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~s-pDg~~i~f~s~~~g~~~iy~~d~~~g~~- 323 (430)
T PRK00178 247 APAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWG-KDGRTLYFTSDRGGKPQIYKVNVNGGRA- 323 (430)
T ss_pred CeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEEC-CCCCEEEEEECCCCCceEEEEECCCCCE-
Confidence 357999999776 444444 5788898876643 344444455677899 6677655444 344 466677766653
Q ss_pred eeecccccceEEEEEccCCCEEEEeecC-C--cEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMD-H--TARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~--~i~~~~~ 112 (113)
..+...........|+|+|+.++....+ + .|.++|+
T Consensus 324 ~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl 362 (430)
T PRK00178 324 ERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDL 362 (430)
T ss_pred EEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEEC
Confidence 2222122233457899999998776543 3 4666765
No 271
>KOG1334|consensus
Probab=98.61 E-value=2.6e-07 Score=58.24 Aligned_cols=111 Identities=23% Similarity=0.307 Sum_probs=86.1
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEe-eCCCCeEEEEEEcCCCC-CEEEEEeCCCcEEEEeCCccc---cce
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTY-RGHQNVVYAVAFSEPYG-DKILTGSFDKTLKLWASAKEE---CIQ 77 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~~~~~~~~~~~v~~wd~~~~~---~~~ 77 (113)
-+.|+..|..+++++.|..|.+||...++....+ .+|...|...+|-|..+ ..+++.+.||.+++=.+.... ...
T Consensus 147 tV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~ 226 (559)
T KOG1334|consen 147 TVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTK 226 (559)
T ss_pred eeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecce
Confidence 3557778999999999999999999888776665 46888888888875443 568899999999987664432 234
Q ss_pred eecccccceEEEEEccC-CCEEEEeecCCcEEEeecC
Q psy3639 78 TYRGHSAEVVGVTFSPD-QSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 113 (113)
.+..|.++++.++.-|+ ...|.+++.|+.+.-+|++
T Consensus 227 rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr 263 (559)
T KOG1334|consen 227 RLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLR 263 (559)
T ss_pred ecccccCccceeeecCCCCCcccccccccceeeeeec
Confidence 45568889999999884 4568899999998887764
No 272
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.59 E-value=1.2e-05 Score=49.94 Aligned_cols=102 Identities=11% Similarity=0.016 Sum_probs=73.3
Q ss_pred CCCEEEeeecC-----CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC----------CCcEEEEeCCcc
Q psy3639 9 SPQRCLTGSYD-----RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF----------DKTLKLWASAKE 73 (113)
Q Consensus 9 ~~~~~~~~~~d-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------~~~v~~wd~~~~ 73 (113)
+++.+++.... +.|.+.|..+.+.+.++..-..+-. + ++ ++++.++.+.. +..|.+||..+.
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~-~-~s-pDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~ 87 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNP-V-VA-SDGSFFAHASTVYSRIARGKRTDYVEVIDPQTH 87 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCce-e-EC-CCCCEEEEEeccccccccCCCCCEEEEEECccC
Confidence 45555554443 7899999999999888875444433 4 78 66666655544 789999999999
Q ss_pred ccceeecccc-------cceEEEEEccCCCEEEEeec--CCcEEEeecC
Q psy3639 74 ECIQTYRGHS-------AEVVGVTFSPDQSTFCSCSM--DHTARIFNTM 113 (113)
Q Consensus 74 ~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~--~~~i~~~~~~ 113 (113)
+.+..+.... .....++++|+|+++++... ++.+.+.|+.
T Consensus 88 ~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~ 136 (352)
T TIGR02658 88 LPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLE 136 (352)
T ss_pred cEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECC
Confidence 8887766321 12347899999999988763 6789888863
No 273
>KOG4532|consensus
Probab=98.58 E-value=4.2e-06 Score=49.63 Aligned_cols=101 Identities=16% Similarity=0.073 Sum_probs=70.2
Q ss_pred EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-cc-ceee-cccccceEE
Q psy3639 12 RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-EC-IQTY-RGHSAEVVG 88 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~-~~~~-~~~~~~v~~ 88 (113)
.+..++.|.++++.++.-+..-.......-.+..+..+ +++.++++.+....|..|.+... +. +... ...+..-.+
T Consensus 130 ~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~s-nd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~ 208 (344)
T KOG4532|consen 130 PLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYS-NDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFY 208 (344)
T ss_pred ceeeccCCcceeEEEEecCcccceeeccccceeeeEEc-CCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCcee
Confidence 35566677777777776443322222122237788888 88999999999999999988654 22 2212 222334467
Q ss_pred EEEccCCCEEEEeecCCcEEEeecC
Q psy3639 89 VTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..|+.....++++..||.+.|||+|
T Consensus 209 ~S~s~~~~~FAv~~Qdg~~~I~DVR 233 (344)
T KOG4532|consen 209 NSFSENDLQFAVVFQDGTCAIYDVR 233 (344)
T ss_pred eeeccCcceEEEEecCCcEEEEEec
Confidence 8999988999999999999999986
No 274
>KOG2314|consensus
Probab=98.57 E-value=1.3e-06 Score=56.20 Aligned_cols=106 Identities=20% Similarity=0.189 Sum_probs=77.9
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-----------CCcEEEEeC
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-----------DKTLKLWAS 70 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----------~~~v~~wd~ 70 (113)
+.+.|+|.|.+|++-...| |.+|=-..-..++.+. |.+ |..+.|+ |+..+|++-+. ...+++||+
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp~-Vq~idfS-P~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI 289 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HPG-VQFIDFS-PNEKYLVTYSPEPIIVEEDDNEGQQLIIWDI 289 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CCC-ceeeecC-CccceEEEecCCccccCcccCCCceEEEEEc
Confidence 3578999999999999877 6789655555555655 654 7889999 77888887543 246999999
Q ss_pred Cccccceeecccc--cceE-EEEEccCCCEEEEeecCCcEEEeec
Q psy3639 71 AKEECIQTYRGHS--AEVV-GVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 71 ~~~~~~~~~~~~~--~~v~-~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.+|.....+.... ...+ -+.||.|+.+++.-.. +.|.|++.
T Consensus 290 ~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEt 333 (698)
T KOG2314|consen 290 ATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYET 333 (698)
T ss_pred cccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEec
Confidence 9998887776532 2222 4789999999876655 56777764
No 275
>KOG4640|consensus
Probab=98.54 E-value=9.2e-07 Score=57.39 Aligned_cols=88 Identities=11% Similarity=0.093 Sum_probs=71.2
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEE-EEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec-
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVY-AVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR- 80 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~- 80 (113)
...|+|...++|++..+|.+.+.... ...+.++..+..+++ +++|. ++|+.++.|-.||+|++.|...+..+..+.
T Consensus 25 ~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~-~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~ 102 (665)
T KOG4640|consen 25 RIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWR-PDGKLLAVGFKDGTIRLHDVEKGGRLVSFLF 102 (665)
T ss_pred EEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeec-CCCCEEEEEecCCeEEEEEccCCCceecccc
Confidence 34688999999999999999998877 677778887777777 99999 789999999999999999999887766632
Q ss_pred ccccceEEEEEc
Q psy3639 81 GHSAEVVGVTFS 92 (113)
Q Consensus 81 ~~~~~v~~~~~~ 92 (113)
.....+..+-|+
T Consensus 103 s~e~~is~~~w~ 114 (665)
T KOG4640|consen 103 SVETDISKGIWD 114 (665)
T ss_pred ccccchheeecc
Confidence 134456666665
No 276
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.51 E-value=1.5e-05 Score=51.09 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=62.4
Q ss_pred ceEcCCCCEEEe-eecCCe--EEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEe-CCCc--EEEEeCCccccce
Q psy3639 4 PRVTSSPQRCLT-GSYDRT--CKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS-FDKT--LKLWASAKEECIQ 77 (113)
Q Consensus 4 ~~~~~~~~~~~~-~~~d~~--v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~--v~~wd~~~~~~~~ 77 (113)
..|+|+++.++. .+.++. |+++|+.+++.. .+..+........|+ +++..++..+ .++. +.++|+.+++..
T Consensus 267 ~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wS-pDG~~I~f~s~~~g~~~Iy~~dl~~g~~~- 343 (448)
T PRK04792 267 PRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-RITRHRAIDTEPSWH-PDGKSLIFTSERGGKPQIYRVNLASGKVS- 343 (448)
T ss_pred eeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECccCCCCccceEEC-CCCCEEEEEECCCCCceEEEEECCCCCEE-
Confidence 478999997764 555664 777788766543 344344556778899 6677665444 3444 555677666532
Q ss_pred eecccccceEEEEEccCCCEEEEeec-CCcEEE
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSM-DHTARI 109 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~ 109 (113)
.+..........+|+|+|++++..+. ++...+
T Consensus 344 ~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I 376 (448)
T PRK04792 344 RLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNI 376 (448)
T ss_pred EEecCCCCCcCeeECCCCCEEEEEEecCCceEE
Confidence 22212222345689999998877654 343333
No 277
>KOG4640|consensus
Probab=98.51 E-value=1.1e-06 Score=56.98 Aligned_cols=72 Identities=17% Similarity=0.131 Sum_probs=62.1
Q ss_pred CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceE-EEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 40 QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVV-GVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 40 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
...+..+.|+ |.-.++|.+..+|.+.+..+. .+.+.++..++..+. +++|.|||+.+++|-.||+|++.|++
T Consensus 20 ~~~i~~~ewn-P~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve 92 (665)
T KOG4640|consen 20 PINIKRIEWN-PKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVE 92 (665)
T ss_pred ccceEEEEEc-CccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEcc
Confidence 4457889999 667899999999999998877 777888886666666 99999999999999999999999874
No 278
>KOG1064|consensus
Probab=98.51 E-value=4e-07 Score=65.10 Aligned_cols=65 Identities=14% Similarity=0.298 Sum_probs=56.0
Q ss_pred eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 37 RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 37 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.-|...++++++. |..+.+++|+.+|.|++||++..+..+.++. +. ...++++++..|.++||++
T Consensus 2333 ~~H~~gaT~l~~~-P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~ 2397 (2439)
T KOG1064|consen 2333 TCHDGGATVLAYA-PKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRL 2397 (2439)
T ss_pred eecCCCceEEEEc-CcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEc
Confidence 4578889999999 7789999999999999999999887777764 44 4678999999999999986
No 279
>KOG2066|consensus
Probab=98.51 E-value=4.4e-06 Score=55.68 Aligned_cols=100 Identities=11% Similarity=0.139 Sum_probs=74.1
Q ss_pred CCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCC----CCCEEEEEeCCCcEEEEeCCcc-ccc-eeecc
Q psy3639 8 SSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEP----YGDKILTGSFDKTLKLWASAKE-ECI-QTYRG 81 (113)
Q Consensus 8 ~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~~v~~wd~~~~-~~~-~~~~~ 81 (113)
..|+++++++.||+|.|..+.+.+...++. ...++..++++|. ....+++|+..| +.++.-.-. ... ..+..
T Consensus 81 ~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~ 158 (846)
T KOG2066|consen 81 LEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSE 158 (846)
T ss_pred cCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeec
Confidence 368899999999999999988888776666 6678999999953 245789999988 777653221 111 13455
Q ss_pred cccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..++|.++.| .|++++.++.+ .++++|+
T Consensus 159 ~eG~I~~i~W--~g~lIAWand~-Gv~vyd~ 186 (846)
T KOG2066|consen 159 GEGPIHSIKW--RGNLIAWANDD-GVKVYDT 186 (846)
T ss_pred CccceEEEEe--cCcEEEEecCC-CcEEEec
Confidence 6789999999 58888887655 4677775
No 280
>KOG1275|consensus
Probab=98.50 E-value=2.5e-06 Score=57.72 Aligned_cols=100 Identities=16% Similarity=0.240 Sum_probs=78.9
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEE
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVG 88 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~ 88 (113)
++..++.|+....+..+|+.+.+..+...-....+.-++ .+++.+.+|...|+|.+-|..+.+.++++..|.+.+..
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR---~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD 222 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR---YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD 222 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEE---ecCcEEEeecccceEEeecCCcCceeeeeeccccceee
Confidence 456677777777788899988877666654444555555 44789999999999999999999999999999999875
Q ss_pred EEEccCCCEEEEeec---------CCcEEEeecC
Q psy3639 89 VTFSPDQSTFCSCSM---------DHTARIFNTM 113 (113)
Q Consensus 89 ~~~~~~~~~~~~~~~---------~~~i~~~~~~ 113 (113)
+ +-.|+.|++++. |.-++|||+|
T Consensus 223 f--Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLR 254 (1118)
T KOG1275|consen 223 F--DVQGNLLITCGYSMRRYNLAMDPFVKVYDLR 254 (1118)
T ss_pred e--eccCCeEEEeecccccccccccchhhhhhhh
Confidence 5 457999998876 4567888875
No 281
>KOG4190|consensus
Probab=98.50 E-value=6.8e-07 Score=57.76 Aligned_cols=63 Identities=27% Similarity=0.439 Sum_probs=48.0
Q ss_pred CCCEEEeeecCCeEEEeeCCC-------CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKS-------GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE 74 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~ 74 (113)
+.+.+++++.|++|++|.++. ..+..++..|+.+|.++-|- .+.+.++ +-||-+++||.--++
T Consensus 746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL-~~lr~i~--ScD~giHlWDPFigr 815 (1034)
T KOG4190|consen 746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFL-ADLRSIA--SCDGGIHLWDPFIGR 815 (1034)
T ss_pred cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeee-eccceee--eccCcceeecccccc
Confidence 556799999999999999853 23667888899999999887 5555554 456789999864443
No 282
>KOG4497|consensus
Probab=98.47 E-value=1e-05 Score=49.37 Aligned_cols=97 Identities=20% Similarity=0.331 Sum_probs=71.5
Q ss_pred eEcCCCCEEE-eeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCC-CEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 5 RVTSSPQRCL-TGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG-DKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 5 ~~~~~~~~~~-~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
.|..+..+++ ....++.|.+|++...+=-..++....++..++|+ |+| ..+.+...+-.|.+|.+.+.+.... +..
T Consensus 55 eW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WS-PdgrhiL~tseF~lriTVWSL~t~~~~~~-~~p 132 (447)
T KOG4497|consen 55 EWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWS-PDGRHILLTSEFDLRITVWSLNTQKGYLL-PHP 132 (447)
T ss_pred eeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeEC-CCcceEeeeecceeEEEEEEeccceeEEe-ccc
Confidence 3555555555 45668899999998776666677778889999999 556 6677888899999999887664332 223
Q ss_pred ccceEEEEEccCCCEEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~ 103 (113)
+..+..++|+|+|++.+..+.
T Consensus 133 K~~~kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 133 KTNVKGYAFHPDGQFCAILSR 153 (447)
T ss_pred ccCceeEEECCCCceeeeeec
Confidence 445678999999998776543
No 283
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.47 E-value=8.7e-07 Score=36.23 Aligned_cols=37 Identities=35% Similarity=0.625 Sum_probs=31.5
Q ss_pred cceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 75 CIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 75 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
....+..+...+.++.|++.+..+++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3455556777899999999999999999999999996
No 284
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.47 E-value=6.7e-07 Score=53.99 Aligned_cols=108 Identities=15% Similarity=0.198 Sum_probs=75.0
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeee---EEeeCC-----CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEI---CTYRGH-----QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE- 74 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~---~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~- 74 (113)
+.++.+.+.++++. |-.|.+|++...... ..++.| ..-|++..|+|.....+...+..|.|++-|++...
T Consensus 178 iS~NsD~et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~al 256 (460)
T COG5170 178 ISFNSDKETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSAL 256 (460)
T ss_pred eeecCchheeeecc-ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhh
Confidence 34556666677664 678999998654322 233333 34578889998888889999999999999998532
Q ss_pred -----cceee----------cccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 75 -----CIQTY----------RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 75 -----~~~~~----------~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.+... .+....|..+.|+++|+++++-+. -++++||++
T Consensus 257 cdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvn 309 (460)
T COG5170 257 CDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVN 309 (460)
T ss_pred ccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecc
Confidence 11111 122356788999999998877654 689999974
No 285
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.45 E-value=4.3e-05 Score=47.47 Aligned_cols=108 Identities=18% Similarity=0.224 Sum_probs=69.8
Q ss_pred ceEcCCCCEEEee-ecCCeEEEeeCC--CCe--eeEEeeCC------CCeEEEEEEcCCCCCEEEEEe-CCCcEEEEeCC
Q psy3639 4 PRVTSSPQRCLTG-SYDRTCKLWDIK--SGH--EICTYRGH------QNVVYAVAFSEPYGDKILTGS-FDKTLKLWASA 71 (113)
Q Consensus 4 ~~~~~~~~~~~~~-~~d~~v~i~~~~--~~~--~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~-~~~~v~~wd~~ 71 (113)
..|+|+++++++. -.++.|.++++. ++. .++.+... ......++++ +++++++.+. ..+.|.+|++.
T Consensus 197 ~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~is-pdg~~lyvsnr~~~sI~vf~~d 275 (345)
T PF10282_consen 197 LAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAIS-PDGRFLYVSNRGSNSISVFDLD 275 (345)
T ss_dssp EEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE--TTSSEEEEEECTTTEEEEEEEC
T ss_pred EEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEe-cCCCEEEEEeccCCEEEEEEEe
Confidence 4689999876654 447789999887 442 22333211 2257889999 7788776655 46789999983
Q ss_pred c--cc--cceeecccccceEEEEEccCCCEEEEeec-CCcEEEeec
Q psy3639 72 K--EE--CIQTYRGHSAEVVGVTFSPDQSTFCSCSM-DHTARIFNT 112 (113)
Q Consensus 72 ~--~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~ 112 (113)
. ++ .+............+.++|+|++|+++.. ++.|.+|++
T Consensus 276 ~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 276 PATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDI 321 (345)
T ss_dssp TTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred cCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence 2 22 23333333445688999999999988875 568888864
No 286
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.44 E-value=2.5e-05 Score=40.51 Aligned_cols=96 Identities=9% Similarity=0.123 Sum_probs=63.6
Q ss_pred eEcCCC-CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 5 RVTSSP-QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 5 ~~~~~~-~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
.+.-++ +.|++|++|..|++|+- .+.+..+. ....+..+.-. . +..++.+..+|+|-+|+- .+.+...+...
T Consensus 9 d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~-e~~~v~~L~~~-~-~~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~ 81 (111)
T PF14783_consen 9 DFDGDGENELLVGSDDFEIRVFKG--DEIVAEIT-ETDKVTSLCSL-G-GGRFAYALANGTVGVYDR--SQRLWRIKSKN 81 (111)
T ss_pred ecCCCCcceEEEecCCcEEEEEeC--CcEEEEEe-cccceEEEEEc-C-CCEEEEEecCCEEEEEeC--cceeeeeccCC
Confidence 334444 48999999999999984 35666766 44556666654 2 477999999999999975 33345555444
Q ss_pred cceEEEEE-ccCC--C-EEEEeecCCcEE
Q psy3639 84 AEVVGVTF-SPDQ--S-TFCSCSMDHTAR 108 (113)
Q Consensus 84 ~~v~~~~~-~~~~--~-~~~~~~~~~~i~ 108 (113)
. +.++.+ ..++ . -|++|-.+|.|-
T Consensus 82 ~-~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 82 Q-VTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred C-eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 4 444443 3333 2 478888888774
No 287
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.41 E-value=1e-05 Score=51.50 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=72.0
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCC----cEEEEeCCccccceee
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDK----TLKLWASAKEECIQTY 79 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~v~~wd~~~~~~~~~~ 79 (113)
+.++++|+.++.+.....+.+.|++++.....=+...+.|+.+.|+ +++++++.+--+| .|+++|+..++. ...
T Consensus 407 v~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~-~nsr~iAYafP~gy~tq~Iklydm~~~Ki-y~v 484 (668)
T COG4946 407 VKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWH-PNSRWIAYAFPEGYYTQSIKLYDMDGGKI-YDV 484 (668)
T ss_pred EEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEc-CCceeEEEecCcceeeeeEEEEecCCCeE-EEe
Confidence 5678999999999999999999999887654445567789999999 8888888765554 589999988763 333
Q ss_pred cccccceEEEEEccCCCEEEE
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCS 100 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~ 100 (113)
......-.+-+|.|++++|.-
T Consensus 485 TT~ta~DfsPaFD~d~ryLYf 505 (668)
T COG4946 485 TTPTAYDFSPAFDPDGRYLYF 505 (668)
T ss_pred cCCcccccCcccCCCCcEEEE
Confidence 333444466788889987643
No 288
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.41 E-value=1.1e-05 Score=50.57 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=64.2
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCC-eEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceE
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQN-VVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVV 87 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~ 87 (113)
.+..++.++.++.+..+|..+++.+........ ....... .+..++.++.+|.+.++|..+++.+..++.+...+.
T Consensus 278 ~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i---~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~ 354 (377)
T TIGR03300 278 DDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV---VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIA 354 (377)
T ss_pred eCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE---ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccc
Confidence 455666777788888888888876655422111 1122222 256788899999999999999998887775543332
Q ss_pred E-EEEccCCCEEEEeecCCcEEEe
Q psy3639 88 G-VTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 88 ~-~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
. ..+ -++.+++++.||.|+.|
T Consensus 355 ~sp~~--~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 355 SPPVV--VGDGLLVQTRDGDLYAF 376 (377)
T ss_pred cCCEE--ECCEEEEEeCCceEEEe
Confidence 2 122 23458889999998876
No 289
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.40 E-value=3.3e-06 Score=34.37 Aligned_cols=38 Identities=42% Similarity=0.638 Sum_probs=31.9
Q ss_pred eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q psy3639 31 HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA 69 (113)
Q Consensus 31 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd 69 (113)
+....+..|...+.++.+. +.+..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFS-PDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEEC-CCCCEEEEecCCCeEEEcC
Confidence 4455666788899999999 5668999999999999996
No 290
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.39 E-value=6e-05 Score=46.92 Aligned_cols=101 Identities=18% Similarity=0.138 Sum_probs=68.8
Q ss_pred CCCEEEeeecCCeEEEeeCCCC-----eeeEEeeC-------CCCeEEEEEEcCCCCCEEEEEe----------CCCcEE
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSG-----HEICTYRG-------HQNVVYAVAFSEPYGDKILTGS----------FDKTLK 66 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~-----~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~~----------~~~~v~ 66 (113)
++.++.+..+ |.|.+.|+... +.+..+.. ......-++++ +++..++... ..+.|.
T Consensus 205 dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~-~dg~~lyV~~~~~~~~thk~~~~~V~ 282 (352)
T TIGR02658 205 SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYH-RARDRIYLLADQRAKWTHKTASRFLF 282 (352)
T ss_pred CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEc-CCCCEEEEEecCCccccccCCCCEEE
Confidence 6777777666 99999995432 22222211 11223348899 5555555432 124799
Q ss_pred EEeCCccccceeecccccceEEEEEccCCC-EEEEee-cCCcEEEeec
Q psy3639 67 LWASAKEECIQTYRGHSAEVVGVTFSPDQS-TFCSCS-MDHTARIFNT 112 (113)
Q Consensus 67 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-~~~~i~~~~~ 112 (113)
++|..+.+.+..+.. ...+..++++|+++ ++++.+ .++.|.++|+
T Consensus 283 ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~ 329 (352)
T TIGR02658 283 VVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDA 329 (352)
T ss_pred EEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEEC
Confidence 999999998887773 45789999999999 887766 5788999986
No 291
>KOG4190|consensus
Probab=98.38 E-value=3.3e-07 Score=59.13 Aligned_cols=77 Identities=29% Similarity=0.601 Sum_probs=62.9
Q ss_pred eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc-------cccceeecccccceEEEEEccCCCEEEEeecCC
Q psy3639 33 ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK-------EECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDH 105 (113)
Q Consensus 33 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 105 (113)
+..+.+|+..|..+.-- .+.+-+++++.|.+|++|.++. ..+..++..|+.+|.++.|-.+.++++++ |+
T Consensus 728 L~nf~GH~~~iRai~Ai-dNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~ 804 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAI-DNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG 804 (1034)
T ss_pred eecccCcHHHhHHHHhc-ccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence 45667888888888766 6778899999999999998754 34678889999999999998887766554 78
Q ss_pred cEEEeec
Q psy3639 106 TARIFNT 112 (113)
Q Consensus 106 ~i~~~~~ 112 (113)
.|++||-
T Consensus 805 giHlWDP 811 (1034)
T KOG4190|consen 805 GIHLWDP 811 (1034)
T ss_pred cceeecc
Confidence 9999984
No 292
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.34 E-value=6.8e-05 Score=52.81 Aligned_cols=107 Identities=10% Similarity=0.119 Sum_probs=71.1
Q ss_pred ceEcC-CCCEEEeeecCCeEEEeeCCCCeeeEEeeC---------------CCCeEEEEEEcCCCCC-EEEEEeCCCcEE
Q psy3639 4 PRVTS-SPQRCLTGSYDRTCKLWDIKSGHEICTYRG---------------HQNVVYAVAFSEPYGD-KILTGSFDKTLK 66 (113)
Q Consensus 4 ~~~~~-~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~-~~~~~~~~~~v~ 66 (113)
++++| ++.++++...++.|++||..++... .+.+ .......++++ +++. ++++-..++.|+
T Consensus 688 Va~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavs-pdG~~LYVADs~n~~Ir 765 (1057)
T PLN02919 688 VCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLS-PDLKELYIADSESSSIR 765 (1057)
T ss_pred EEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEe-CCCCEEEEEECCCCeEE
Confidence 46777 5567777777889999998766432 2211 11234578898 5555 566666778999
Q ss_pred EEeCCcccccee-------------ecc--------cccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 67 LWASAKEECIQT-------------YRG--------HSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 67 ~wd~~~~~~~~~-------------~~~--------~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+||+.++..... +.. .......++++++|+.+++-..++.|++||.
T Consensus 766 v~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~ 832 (1057)
T PLN02919 766 ALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDP 832 (1057)
T ss_pred EEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEEC
Confidence 999876532110 000 0112357899999998888888999999986
No 293
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.33 E-value=0.00016 Score=45.02 Aligned_cols=109 Identities=12% Similarity=0.124 Sum_probs=71.4
Q ss_pred cceEcCCCCEEEeeec----CCeEEEeeCCCC--e--eeEEeeCCCCeEEEEEEcCCCCCEEEEEe-CCCcEEEEeCCc-
Q psy3639 3 VPRVTSSPQRCLTGSY----DRTCKLWDIKSG--H--EICTYRGHQNVVYAVAFSEPYGDKILTGS-FDKTLKLWASAK- 72 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~----d~~v~i~~~~~~--~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~v~~wd~~~- 72 (113)
..+++|++++|++..+ ++.|..|.+... . .+..........+.++++ +++.+++++. .+|.+.++++..
T Consensus 41 ~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~-~~g~~l~vany~~g~v~v~~l~~~ 119 (345)
T PF10282_consen 41 WLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVD-PDGRFLYVANYGGGSVSVFPLDDD 119 (345)
T ss_dssp CEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTT
T ss_pred eEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEe-cCCCEEEEEEccCCeEEEEEccCC
Confidence 4577889998888766 568888887653 3 333333344556789998 6677777666 588999999876
Q ss_pred cccce---eec----------ccccceEEEEEccCCCEEEEeec-CCcEEEeec
Q psy3639 73 EECIQ---TYR----------GHSAEVVGVTFSPDQSTFCSCSM-DHTARIFNT 112 (113)
Q Consensus 73 ~~~~~---~~~----------~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~ 112 (113)
+.... ... ......+.+.++|+|+++++... ...|.+|++
T Consensus 120 g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~ 173 (345)
T PF10282_consen 120 GSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDI 173 (345)
T ss_dssp SEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred cccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEE
Confidence 32211 111 11245688999999998887654 356777765
No 294
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.31 E-value=0.00019 Score=45.88 Aligned_cols=106 Identities=16% Similarity=0.140 Sum_probs=64.2
Q ss_pred ceEcCCCCE-EEeeec---CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEE-EEEeCC--CcEEEEeCCccccc
Q psy3639 4 PRVTSSPQR-CLTGSY---DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKI-LTGSFD--KTLKLWASAKEECI 76 (113)
Q Consensus 4 ~~~~~~~~~-~~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~--~~v~~wd~~~~~~~ 76 (113)
..|+|+++. ++..+. +..|.++|+.+++...... .........|+ |++..+ ++.+.+ ..|.++|+..++ .
T Consensus 193 p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~S-PDG~~la~~~~~~g~~~Iy~~dl~~g~-~ 269 (419)
T PRK04043 193 PKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVS-KDGSKLLLTMAPKGQPDIYLYDTNTKT-L 269 (419)
T ss_pred EEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEEC-CCCCEEEEEEccCCCcEEEEEECCCCc-E
Confidence 578999984 554333 3568889998876554433 44555667899 667654 444444 457777877665 3
Q ss_pred eeecccccceEEEEEccCCCEEEEeec-CC--cEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSM-DH--TARIFNT 112 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~ 112 (113)
..+...........|+|||+.++..+. .+ .|.+.|+
T Consensus 270 ~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl 308 (419)
T PRK04043 270 TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL 308 (419)
T ss_pred EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence 333322222334689999998766553 33 4554443
No 295
>KOG1912|consensus
Probab=98.28 E-value=1.7e-05 Score=53.25 Aligned_cols=106 Identities=18% Similarity=0.126 Sum_probs=82.2
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCC-----------CCCEEEEEeCCCcEEEEeCCcc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEP-----------YGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
.|+|+| +++.|+. ..|.+-|..+-+.++.+..|...|+.+.|.|. ....++++...|.|.+||....
T Consensus 22 Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~ 99 (1062)
T KOG1912|consen 22 DWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLA 99 (1062)
T ss_pred ccCccc-eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhh
Confidence 344444 3555554 46889999989999999999999999999862 2235778888999999999988
Q ss_pred ccceeecccccceEEEEEcc---CC-CEEEEeecCCcEEEeec
Q psy3639 74 ECIQTYRGHSAEVVGVTFSP---DQ-STFCSCSMDHTARIFNT 112 (113)
Q Consensus 74 ~~~~~~~~~~~~v~~~~~~~---~~-~~~~~~~~~~~i~~~~~ 112 (113)
..+..+..+..++..++|-+ +. ..+++-+....+.+|+.
T Consensus 100 s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwnt 142 (1062)
T KOG1912|consen 100 SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNT 142 (1062)
T ss_pred hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEc
Confidence 87788887888888999866 33 46677777888999864
No 296
>KOG1354|consensus
Probab=98.26 E-value=3.5e-05 Score=47.33 Aligned_cols=111 Identities=18% Similarity=0.316 Sum_probs=74.6
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCe-----eeEEeeCC------------CCeEEEEEEcCCCC-CEEEEEeCCC
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGH-----EICTYRGH------------QNVVYAVAFSEPYG-DKILTGSFDK 63 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~-----~~~~~~~~------------~~~v~~~~~~~~~~-~~~~~~~~~~ 63 (113)
.++.+...|++|++|..+|.|.+|.-.... ....++.| ...|..+.|.++.+ ..+.....|.
T Consensus 29 s~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdk 108 (433)
T KOG1354|consen 29 SAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDK 108 (433)
T ss_pred eeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCc
Confidence 456788899999999999999998743222 11222223 35678899984433 3566777889
Q ss_pred cEEEEeCCcccc--------------------cee---------------e-cccccceEEEEEccCCCEEEEeecCCcE
Q psy3639 64 TLKLWASAKEEC--------------------IQT---------------Y-RGHSAEVVGVTFSPDQSTFCSCSMDHTA 107 (113)
Q Consensus 64 ~v~~wd~~~~~~--------------------~~~---------------~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i 107 (113)
++++|.+..... +.. + .+|.--+++++++.|+.+++++. |=.|
T Consensus 109 tiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD-dLRI 187 (433)
T KOG1354|consen 109 TIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD-DLRI 187 (433)
T ss_pred ceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc-ceee
Confidence 999997643210 000 0 13555678899999999888774 6678
Q ss_pred EEeecC
Q psy3639 108 RIFNTM 113 (113)
Q Consensus 108 ~~~~~~ 113 (113)
.+|+++
T Consensus 188 NLWnle 193 (433)
T KOG1354|consen 188 NLWNLE 193 (433)
T ss_pred eecccc
Confidence 888763
No 297
>KOG1912|consensus
Probab=98.26 E-value=2e-05 Score=52.91 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=80.3
Q ss_pred EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCC--C-CEEEEEeCCCcEEEEeCCccccceeecccccceEE
Q psy3639 12 RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPY--G-DKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVG 88 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~-~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~ 88 (113)
+++++...|.|.+||...+.....+..+..++.++.|-+.. . ..++.-....++.+|+..+|+.+..+........+
T Consensus 81 liAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~ 160 (1062)
T KOG1912|consen 81 LIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSC 160 (1062)
T ss_pred eEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceee
Confidence 67788889999999999988888888889999999986422 2 45666777789999999999999988877777888
Q ss_pred EEEcc-CCCEEEEeecCCcEEEe
Q psy3639 89 VTFSP-DQSTFCSCSMDHTARIF 110 (113)
Q Consensus 89 ~~~~~-~~~~~~~~~~~~~i~~~ 110 (113)
+.+.| +.+.+..-+..|.+-+-
T Consensus 161 f~~DPfd~rh~~~l~s~g~vl~~ 183 (1062)
T KOG1912|consen 161 FRVDPFDSRHFCVLGSKGFVLSC 183 (1062)
T ss_pred eeeCCCCcceEEEEccCceEEEE
Confidence 99998 77778777777766554
No 298
>KOG2444|consensus
Probab=98.23 E-value=9.6e-06 Score=46.96 Aligned_cols=103 Identities=9% Similarity=0.046 Sum_probs=69.1
Q ss_pred CCEEEeeecCCeEEEeeCCC-CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc-cceE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKS-GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS-AEVV 87 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~-~~v~ 87 (113)
+.-+++|+.+|.|++|+... +.....+......+.++.-.-..+.+.+++..+|.++.|++...+.+.....|+ .+..
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e 149 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGE 149 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcc
Confidence 45688999999999998752 222222222334444443332445588899999999999998888776666665 4555
Q ss_pred EEEEccCCCEEEEe--ecCCcEEEeec
Q psy3639 88 GVTFSPDQSTFCSC--SMDHTARIFNT 112 (113)
Q Consensus 88 ~~~~~~~~~~~~~~--~~~~~i~~~~~ 112 (113)
....+..++.+..+ +.+..++.|++
T Consensus 150 ~~ivv~sd~~i~~a~~S~d~~~k~W~v 176 (238)
T KOG2444|consen 150 ELIVVGSDEFLKIADTSHDRVLKKWNV 176 (238)
T ss_pred eeEEecCCceEEeeccccchhhhhcch
Confidence 55555566777666 77888888876
No 299
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.22 E-value=0.0001 Score=46.23 Aligned_cols=99 Identities=9% Similarity=0.053 Sum_probs=66.3
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEE
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVG 88 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~ 88 (113)
.+..+++++.++.+.-+|..+++.+............... .+..++.++.++.+..+|..+++.+............
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v---~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~ 140 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA---DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSP 140 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE---cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecC
Confidence 3567788888899999999999988776543322222222 2567778888999999999999877666533221111
Q ss_pred EEEccCCCEEEEeecCCcEEEeec
Q psy3639 89 VTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
... .+..++.++.++.++.+|.
T Consensus 141 p~v--~~~~v~v~~~~g~l~a~d~ 162 (377)
T TIGR03300 141 PLV--ANGLVVVRTNDGRLTALDA 162 (377)
T ss_pred CEE--ECCEEEEECCCCeEEEEEc
Confidence 111 3456677777888888875
No 300
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.22 E-value=4.5e-05 Score=52.94 Aligned_cols=105 Identities=10% Similarity=0.174 Sum_probs=70.2
Q ss_pred ceEcCCCCEEEeeec------CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC---CCcEEEEeCCccc
Q psy3639 4 PRVTSSPQRCLTGSY------DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF---DKTLKLWASAKEE 74 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~------d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~v~~wd~~~~~ 74 (113)
++|-.||+++++.+. -+.+++|+-+ |....+-+.-.+.-..++|. |.|+++++.-. ...|.+|.- +|.
T Consensus 215 ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~Wr-PsG~lIA~~q~~~~~~~VvFfEr-NGL 291 (928)
T PF04762_consen 215 ISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWR-PSGNLIASSQRLPDRHDVVFFER-NGL 291 (928)
T ss_pred EEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCC-CCCCEEEEEEEcCCCcEEEEEec-CCc
Confidence 456678889998765 2578999965 66554444444445688999 77888876654 235666653 332
Q ss_pred ccee----ecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 75 CIQT----YRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 75 ~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.-.. +......+..+.|++++..|++...|. |.+|-.
T Consensus 292 rhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~ 332 (928)
T PF04762_consen 292 RHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTR 332 (928)
T ss_pred EeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEe
Confidence 2222 223456789999999999999876554 888854
No 301
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.20 E-value=0.00028 Score=43.42 Aligned_cols=108 Identities=12% Similarity=0.223 Sum_probs=74.3
Q ss_pred cceEcCCCCEEEeeec-CCeEEEeeCCC-Cee---eEEeeCCCCe----------EEEEEEcCCCCCEEEEEeC-CCcEE
Q psy3639 3 VPRVTSSPQRCLTGSY-DRTCKLWDIKS-GHE---ICTYRGHQNV----------VYAVAFSEPYGDKILTGSF-DKTLK 66 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~-d~~v~i~~~~~-~~~---~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~~-~~~v~ 66 (113)
-+++++++++++++.. .+.|.++.+.+ |.. ++.+. |... +....+. |+++++++.+. --.|.
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~-h~g~~p~~rQ~~~h~H~a~~t-P~~~~l~v~DLG~Dri~ 170 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVK-HTGSGPHERQESPHVHSANFT-PDGRYLVVPDLGTDRIF 170 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeee-cCCCCCCccccCCccceeeeC-CCCCEEEEeecCCceEE
Confidence 3578899998888776 47788998855 332 22222 4444 7788888 77877776655 34689
Q ss_pred EEeCCccccceeec---ccccceEEEEEccCCCEEEEeec-CCcEEEeec
Q psy3639 67 LWASAKEECIQTYR---GHSAEVVGVTFSPDQSTFCSCSM-DHTARIFNT 112 (113)
Q Consensus 67 ~wd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~ 112 (113)
+|++..++....-. .....-+++.|+|++++..+.++ +++|.+|..
T Consensus 171 ~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y 220 (346)
T COG2706 171 LYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEY 220 (346)
T ss_pred EEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEE
Confidence 99998765322111 23456689999999998877666 788888864
No 302
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.14 E-value=0.00011 Score=43.02 Aligned_cols=102 Identities=13% Similarity=0.078 Sum_probs=66.6
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee-cccc---c
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY-RGHS---A 84 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~-~~~~---~ 84 (113)
.+..+++++.++.+..||..+|+.+..+........... ..+..++.+..++.+..+|..+++.+... .... .
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~---~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~ 111 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPV---VDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG 111 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEE---EETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceee---ecccccccccceeeeEecccCCcceeeeeccccccccc
Confidence 566677778899999999999998877764221111112 22456666778889999999999888773 3221 1
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
..........+..++++..++.+..+|++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 140 (238)
T PF13360_consen 112 VRSSSSPAVDGDRLYVGTSSGKLVALDPK 140 (238)
T ss_dssp TB--SEEEEETTEEEEEETCSEEEEEETT
T ss_pred cccccCceEecCEEEEEeccCcEEEEecC
Confidence 11122222347778888888888888753
No 303
>KOG2066|consensus
Probab=98.13 E-value=2.8e-05 Score=52.12 Aligned_cols=93 Identities=16% Similarity=0.163 Sum_probs=69.5
Q ss_pred cCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccce
Q psy3639 7 TSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEV 86 (113)
Q Consensus 7 ~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v 86 (113)
.-.+++++-|+.+|.+++++.. +.+ .+...|... . ..|.++++++.||++.+-.+-+.+...++. ...++
T Consensus 46 av~~~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~-~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpi 115 (846)
T KOG2066|consen 46 AVHDKFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------I-LEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPI 115 (846)
T ss_pred HhhcceeeeccccceEEEEecC-Ccc-ccccccccc------c-cCCceEEEecCCCcEEEeeccCCccceeEe-cCCcc
Confidence 4457889999999999999875 333 333334333 3 679999999999999999888877666666 45688
Q ss_pred EEEEEccC-----CCEEEEeecCCcEEEe
Q psy3639 87 VGVTFSPD-----QSTFCSCSMDHTARIF 110 (113)
Q Consensus 87 ~~~~~~~~-----~~~~~~~~~~~~i~~~ 110 (113)
.+++++|+ .+.+++|+..| +.++
T Consensus 116 ksial~Pd~~~~~sk~fv~GG~ag-lvL~ 143 (846)
T KOG2066|consen 116 KSIALHPDFSRQQSKQFVSGGMAG-LVLS 143 (846)
T ss_pred eeEEeccchhhhhhhheeecCcce-EEEe
Confidence 89999996 55688888877 5544
No 304
>KOG0309|consensus
Probab=98.13 E-value=1.9e-05 Score=52.86 Aligned_cols=109 Identities=11% Similarity=0.231 Sum_probs=76.1
Q ss_pred eEcCCC--CEEEeeecCCeEEEeeCCCC---eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc-ccee
Q psy3639 5 RVTSSP--QRCLTGSYDRTCKLWDIKSG---HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE-CIQT 78 (113)
Q Consensus 5 ~~~~~~--~~~~~~~~d~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~-~~~~ 78 (113)
.|++.. .+-++........+|++... .....+.+|...++++.|+|.....+++++.|-.+..||+++.. .+..
T Consensus 74 qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys 153 (1081)
T KOG0309|consen 74 QWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYS 153 (1081)
T ss_pred ecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceee
Confidence 445543 23333334444568987543 34567788999999999998888899999999999999998763 4444
Q ss_pred ecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 79 YRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
...-...-..++|+...-.+.+.+..+.+.+||++
T Consensus 154 ~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r 188 (1081)
T KOG0309|consen 154 TSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLR 188 (1081)
T ss_pred eecccccCceeeecccCcchhhhccCCceEEEecc
Confidence 44333444668898744445566677889999975
No 305
>KOG2695|consensus
Probab=98.11 E-value=2.1e-05 Score=48.20 Aligned_cols=83 Identities=18% Similarity=0.290 Sum_probs=60.7
Q ss_pred CCCEEEeeecCCeEEEeeCCCCee---eEEeeCCCCeEEEEE--EcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHE---ICTYRGHQNVVYAVA--FSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~---~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
+++.+.+++-+|+|++||.+--++ +.++.+|...-.-+. .. +....+++++.|...++|.++++..+.+++...
T Consensus 310 s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~-~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~ 388 (425)
T KOG2695|consen 310 SQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVK-EEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPY 388 (425)
T ss_pred ccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccc-cccceEEEccCeeEEEEEecccCceeeccCCCC
Confidence 567888888899999999976665 888888865433333 34 445567789999999999999998877766432
Q ss_pred ----cceEEEEEc
Q psy3639 84 ----AEVVGVTFS 92 (113)
Q Consensus 84 ----~~v~~~~~~ 92 (113)
..+.++++.
T Consensus 389 s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 389 SASEVDIPSVAFD 401 (425)
T ss_pred ccccccccceehh
Confidence 234556664
No 306
>KOG2079|consensus
Probab=98.11 E-value=2e-05 Score=54.32 Aligned_cols=96 Identities=19% Similarity=0.247 Sum_probs=69.1
Q ss_pred CCEEEeeecCCeEEEeeCCCC-eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccc---
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSG-HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE--- 85 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~--- 85 (113)
+-.++.|+..|.+...|.... .+...-+.-..+|++++++ .+|..++.|-.+|.|.+||...++.++.+..+..+
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn-~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFN-QDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEec-CCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 345677777777777776542 1112222346789999999 99999999999999999999998888777655443
Q ss_pred eEEEEEccCCCEEEEeecCCc
Q psy3639 86 VVGVTFSPDQSTFCSCSMDHT 106 (113)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~ 106 (113)
+..+.+..++..++++...|.
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc
Confidence 444555556667888877776
No 307
>KOG0309|consensus
Probab=98.11 E-value=6.9e-06 Score=54.80 Aligned_cols=102 Identities=21% Similarity=0.330 Sum_probs=77.0
Q ss_pred CCEEEeeecCCeEEEeeCCCCe-eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceeecccccceE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGH-EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTYRGHSAEVV 87 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~~~~~~~v~ 87 (113)
+..+++++-|..+..||+++.. ++..+.........++|+-.++..++ .+..+.|++||.+.+ ..+..++++...++
T Consensus 127 pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vla-sshg~~i~vwd~r~gs~pl~s~K~~vs~vn 205 (1081)
T KOG0309|consen 127 PDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLA-SSHGNDIFVWDLRKGSTPLCSLKGHVSSVN 205 (1081)
T ss_pred CcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhh-hccCCceEEEeccCCCcceEEecccceeee
Confidence 3578899999999999998654 45555555556688999855555554 445567999999865 67788888888888
Q ss_pred EEEEcc-CCCEEEEeecCCcEEEeec
Q psy3639 88 GVTFSP-DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 88 ~~~~~~-~~~~~~~~~~~~~i~~~~~ 112 (113)
.++|.. .-..+.+++.|+++++||.
T Consensus 206 ~~~fnr~~~s~~~s~~~d~tvkfw~y 231 (1081)
T KOG0309|consen 206 SIDFNRFKYSEIMSSSNDGTVKFWDY 231 (1081)
T ss_pred hHHHhhhhhhhhcccCCCCceeeecc
Confidence 888875 2234678899999999985
No 308
>KOG1832|consensus
Probab=98.08 E-value=5.7e-06 Score=56.33 Aligned_cols=106 Identities=19% Similarity=0.186 Sum_probs=79.0
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-CC-cEEEEeCCc-ccccee
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-DK-TLKLWASAK-EECIQT 78 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~-~v~~wd~~~-~~~~~~ 78 (113)
.|++|+-..++++.|+..|.|++|++.+|........|...++.+.-+ .++..+.+.+. .. ...+|+..+ +...++
T Consensus 1105 Tc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs-~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hs 1183 (1516)
T KOG1832|consen 1105 TCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPS-VDGSTQLTSSSSSSPLSALWDASSTGGPRHS 1183 (1516)
T ss_pred eeEEeecCCceEEeeeccceEEEEEccCcccccccccccccccccccc-CCcceeeeeccccCchHHHhccccccCcccc
Confidence 477888999999999999999999999999999999999999999988 66766554443 33 467898765 344455
Q ss_pred ecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 79 YRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+.+ ..++.|+.....-+.|+......+||+
T Consensus 1184 f~e----d~~vkFsn~~q~r~~gt~~d~a~~YDv 1213 (1516)
T KOG1832|consen 1184 FDE----DKAVKFSNSLQFRALGTEADDALLYDV 1213 (1516)
T ss_pred ccc----cceeehhhhHHHHHhcccccceEEEec
Confidence 543 345677665555556666667777775
No 309
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.02 E-value=4.9e-05 Score=48.66 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=75.5
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCC---------------cEEE
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDK---------------TLKL 67 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---------------~v~~ 67 (113)
..+++|.|.++++....+ |.+|.-.....+..+. | ..|..+.|+ |++.+|.+-+..+ .+.+
T Consensus 37 ~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~-~-~~V~~~~fS-P~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~v 112 (561)
T COG5354 37 YVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFR-H-PDVKYLDFS-PNEKYLVTWSREPIIEPEIEISPFTSKNNVFV 112 (561)
T ss_pred heeecCcchheehhhccc-eEEccccchhheeeee-c-CCceecccC-cccceeeeeccCCccChhhccCCccccCceeE
Confidence 457899999999887755 8899877666555554 4 447889999 7788888765533 4899
Q ss_pred EeCCccccceeecccccc--eE-EEEEccCCCEEEEeecCCcEEEee
Q psy3639 68 WASAKEECIQTYRGHSAE--VV-GVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 68 wd~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
||+.++..+..+....++ .+ -++|+.+..+++-. ....+++++
T Consensus 113 wd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e 158 (561)
T COG5354 113 WDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHE 158 (561)
T ss_pred EeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEe
Confidence 999999998888876655 45 57888877765433 334566665
No 310
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.94 E-value=0.0016 Score=41.78 Aligned_cols=97 Identities=11% Similarity=0.032 Sum_probs=56.8
Q ss_pred cceEcCCCCEEEe-eec--CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCC--cEEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCLT-GSY--DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDK--TLKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~-~~~--d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~--~v~~wd~~~~~~~ 76 (113)
...|+|+++.++. .+. +..|.++++.+++.. .+..+........|+ |+++.++ +....+ .|.+.|+.+++..
T Consensus 237 ~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~~~~~d~~p~~S-PDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~ 314 (419)
T PRK04043 237 VSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT-QITNYPGIDVNGNFV-EDDKRIVFVSDRLGYPNIFMKKLNSGSVE 314 (419)
T ss_pred eeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE-EcccCCCccCccEEC-CCCCEEEEEECCCCCceEEEEECCCCCeE
Confidence 3578999986654 333 356778888766533 333333333456799 6676554 443444 4666677766542
Q ss_pred eeecccccceEEEEEccCCCEEEEeecC
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSMD 104 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 104 (113)
.... ... ....|+|+|+.++.....
T Consensus 315 rlt~-~g~--~~~~~SPDG~~Ia~~~~~ 339 (419)
T PRK04043 315 QVVF-HGK--NNSSVSTYKNYIVYSSRE 339 (419)
T ss_pred eCcc-CCC--cCceECCCCCEEEEEEcC
Confidence 2221 111 134899999988766543
No 311
>KOG4649|consensus
Probab=97.94 E-value=0.00043 Score=41.41 Aligned_cols=83 Identities=18% Similarity=0.221 Sum_probs=59.6
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGV 89 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~ 89 (113)
+++++.|...|.+++-+..+|+....+... +.|..-+...+++..+..++.|+..+..|.++..++.+.+.......+-
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP 141 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSP 141 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeeh-hhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccc
Confidence 667888999999999999999877666532 2333333333678899999999999999999988888776444333334
Q ss_pred EEcc
Q psy3639 90 TFSP 93 (113)
Q Consensus 90 ~~~~ 93 (113)
...|
T Consensus 142 ~i~~ 145 (354)
T KOG4649|consen 142 VIAP 145 (354)
T ss_pred eecC
Confidence 4455
No 312
>KOG1645|consensus
Probab=97.93 E-value=9.6e-05 Score=46.21 Aligned_cols=69 Identities=10% Similarity=0.140 Sum_probs=58.3
Q ss_pred ceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 4 PRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 4 ~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
.+++|..+ ++..++.+.+|++.|+++...+..+..+ ..+.+.+|.-.+.+.++.|..+|.|.+||++..
T Consensus 199 lafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 199 LAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred hccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 46788777 6778899999999999998888888866 778999998556678889999999999998764
No 313
>KOG2314|consensus
Probab=97.91 E-value=0.00018 Score=46.85 Aligned_cols=96 Identities=9% Similarity=0.070 Sum_probs=66.0
Q ss_pred CcceEcCCCCEEEeeec-----------CCeEEEeeCCCCeeeEEeeCC---CCeEEEEEEcCCCCCEEEEEeCCCcEEE
Q psy3639 2 GVPRVTSSPQRCLTGSY-----------DRTCKLWDIKSGHEICTYRGH---QNVVYAVAFSEPYGDKILTGSFDKTLKL 67 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-----------d~~v~i~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~v~~ 67 (113)
..+.|+|+.++|++-+. ...++|||+.+|.....+... ...-.-+.|+ .++.+++--.. ..|.+
T Consensus 253 q~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS-~DdKy~Arm~~-~sisI 330 (698)
T KOG2314|consen 253 QFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWS-HDDKYFARMTG-NSISI 330 (698)
T ss_pred eeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEec-cCCceeEEecc-ceEEE
Confidence 35678999999987543 256899999999877766542 2223457788 77888776655 57889
Q ss_pred EeCCccccceeecccccceEEEEEccCCCEEE
Q psy3639 68 WASAKEECIQTYRGHSAEVVGVTFSPDQSTFC 99 (113)
Q Consensus 68 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (113)
|+..+...+-.-...-..|....|+|.++.|+
T Consensus 331 yEtpsf~lld~Kslki~gIr~FswsP~~~llA 362 (698)
T KOG2314|consen 331 YETPSFMLLDKKSLKISGIRDFSWSPTSNLLA 362 (698)
T ss_pred EecCceeeecccccCCccccCcccCCCcceEE
Confidence 98766443322222345678889999877665
No 314
>KOG4649|consensus
Probab=97.89 E-value=0.0013 Score=39.40 Aligned_cols=101 Identities=16% Similarity=0.070 Sum_probs=72.4
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGV 89 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~ 89 (113)
..+++.|+..+.+.--|..+|+...+-. -...+.+-++- -+.+++.|..+|.+++.+.+++.....+...+.-=..-
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v--vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a 99 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV--VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRA 99 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE--ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccce
Confidence 3477788888988888999888765432 22333333332 26789999999999999999997777665433211234
Q ss_pred EEccCCCEEEEeecCCcEEEeecC
Q psy3639 90 TFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
...+++..+..++.|++.+..|.+
T Consensus 100 ~~d~~~glIycgshd~~~yalD~~ 123 (354)
T KOG4649|consen 100 QCDFDGGLIYCGSHDGNFYALDPK 123 (354)
T ss_pred EEcCCCceEEEecCCCcEEEeccc
Confidence 557789999999999999988753
No 315
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.88 E-value=0.00095 Score=42.29 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=57.3
Q ss_pred CEEEeeecCCeEEEeeCCCCeeeEEeeCCC-CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEE-
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEICTYRGHQ-NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVG- 88 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~- 88 (113)
..++.++.++.+...|..+++.+....... ........ .+..++.++.+|.+...|..+++.+...+.....+.+
T Consensus 295 ~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v---~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~ 371 (394)
T PRK11138 295 GRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL---YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSE 371 (394)
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE---ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeC
Confidence 344445556666666666665443322111 11111111 1456778899999999999999877776543333322
Q ss_pred EEEccCCCEEEEeecCCcEEEeec
Q psy3639 89 VTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..+ .+..+++++.+|.++.+++
T Consensus 372 P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 372 PVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CEE--ECCEEEEEeCCceEEEEeC
Confidence 111 3557888999999988764
No 316
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.86 E-value=0.00013 Score=32.04 Aligned_cols=30 Identities=10% Similarity=0.225 Sum_probs=27.2
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...|..++|+|....++.++.+|.|.++.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 356889999999999999999999999976
No 317
>KOG2315|consensus
Probab=97.83 E-value=0.0011 Score=43.13 Aligned_cols=87 Identities=11% Similarity=0.177 Sum_probs=58.7
Q ss_pred eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE--EEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEE
Q psy3639 21 TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL--TGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTF 98 (113)
Q Consensus 21 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (113)
++++.++...+....+. ..++|.++.|+ +.+.-++ .|-.=-.+.++|++-. .+..+. +++=+++-|+|.|+++
T Consensus 252 ~Lyll~t~g~s~~V~L~-k~GPVhdv~W~-~s~~EF~VvyGfMPAkvtifnlr~~-~v~df~--egpRN~~~fnp~g~ii 326 (566)
T KOG2315|consen 252 TLYLLATQGESVSVPLL-KEGPVHDVTWS-PSGREFAVVYGFMPAKVTIFNLRGK-PVFDFP--EGPRNTAFFNPHGNII 326 (566)
T ss_pred eEEEEEecCceEEEecC-CCCCceEEEEC-CCCCEEEEEEecccceEEEEcCCCC-EeEeCC--CCCccceEECCCCCEE
Confidence 45556655333333333 57899999999 5565443 3444557889987543 344443 4555789999999999
Q ss_pred EEeecC---CcEEEeec
Q psy3639 99 CSCSMD---HTARIFNT 112 (113)
Q Consensus 99 ~~~~~~---~~i~~~~~ 112 (113)
+.++.+ |.|-+||+
T Consensus 327 ~lAGFGNL~G~mEvwDv 343 (566)
T KOG2315|consen 327 LLAGFGNLPGDMEVWDV 343 (566)
T ss_pred EEeecCCCCCceEEEec
Confidence 887775 78999996
No 318
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.82 E-value=0.00071 Score=46.32 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=65.5
Q ss_pred EEEeeecCCeEEEeeCCCCe--eeE-Eee--CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccce
Q psy3639 12 RCLTGSYDRTCKLWDIKSGH--EIC-TYR--GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEV 86 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~--~~~-~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v 86 (113)
.-+.|-.+..+..||.+-.. .+. ..+ .......|++-. . ...++.|+.+|.||+||-...+....+.+.+.+|
T Consensus 544 ~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt-~-~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI 621 (794)
T PF08553_consen 544 QTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATT-E-DGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPI 621 (794)
T ss_pred ceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEec-C-CceEEEEeCCCcEEeecccchhhhhcCCCCCCCe
Confidence 34556566778899987542 221 111 134456677655 4 4578899999999999965445556667778999
Q ss_pred EEEEEccCCCEEEEeecCCcEEEee
Q psy3639 87 VGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.++..+.||++++..+.. -+.+.+
T Consensus 622 ~~iDvt~DGkwilaTc~t-yLlLi~ 645 (794)
T PF08553_consen 622 IGIDVTADGKWILATCKT-YLLLID 645 (794)
T ss_pred eEEEecCCCcEEEEeecc-eEEEEE
Confidence 999999999998766543 344443
No 319
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.79 E-value=0.0011 Score=42.81 Aligned_cols=103 Identities=15% Similarity=0.240 Sum_probs=67.9
Q ss_pred ceEcCCCCEEEee--ecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCC---CcEEEEeCCcccc-ce
Q psy3639 4 PRVTSSPQRCLTG--SYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFD---KTLKLWASAKEEC-IQ 77 (113)
Q Consensus 4 ~~~~~~~~~~~~~--~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~v~~wd~~~~~~-~~ 77 (113)
.+|.|.++.+++. -.+..+.+++++.. ....+. ...-..+.|+ |..++++.++.+ |.+-+||...... ..
T Consensus 280 f~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~P--e~~rNT~~fs-p~~r~il~agF~nl~gni~i~~~~~rf~~~~ 355 (561)
T COG5354 280 FTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFP--EQKRNTIFFS-PHERYILFAGFDNLQGNIEIFDPAGRFKVAG 355 (561)
T ss_pred eeecccCCceeEEecccccceeecccccc-eEEecC--Cccccccccc-CcccEEEEecCCccccceEEeccCCceEEEE
Confidence 3677887766654 35677888998755 333333 2233556677 667777776665 5799999876533 33
Q ss_pred eecccccceEEEEEccCCCEEEEeec------CCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSM------DHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~------~~~i~~~~~ 112 (113)
.+.+.+ ..-+.|+|++.++.+... |+.+++||+
T Consensus 356 ~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v 394 (561)
T COG5354 356 AFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDV 394 (561)
T ss_pred EeecCC--ceEeeccCCceEEEecCCCcccccCcceEEEEe
Confidence 555433 234689999999877543 778999986
No 320
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.74 E-value=0.0025 Score=37.79 Aligned_cols=97 Identities=9% Similarity=0.136 Sum_probs=66.5
Q ss_pred ceEcCCCCEEE-eeecCCeEEEeeCCCC-e------eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc
Q psy3639 4 PRVTSSPQRCL-TGSYDRTCKLWDIKSG-H------EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC 75 (113)
Q Consensus 4 ~~~~~~~~~~~-~~~~d~~v~i~~~~~~-~------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~ 75 (113)
++++|+++.++ +-+..+.|..|++... . ....+.......-.+++. .+++++++....+.|.+++.. ++.
T Consensus 139 i~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD-~~G~l~va~~~~~~I~~~~p~-G~~ 216 (246)
T PF08450_consen 139 IAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVD-SDGNLWVADWGGGRIVVFDPD-GKL 216 (246)
T ss_dssp EEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEB-TTS-EEEEEETTTEEEEEETT-SCE
T ss_pred eEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEc-CCCCEEEEEcCCCEEEEECCC-ccE
Confidence 57899998655 5666788888887532 1 111222222347789998 788988888889999999987 877
Q ss_pred ceeecccccceEEEEE-ccCCCEEEEee
Q psy3639 76 IQTYRGHSAEVVGVTF-SPDQSTFCSCS 102 (113)
Q Consensus 76 ~~~~~~~~~~v~~~~~-~~~~~~~~~~~ 102 (113)
+..+......+.+++| -++.+.|++.+
T Consensus 217 ~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 217 LREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred EEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 7777766567889999 46666665543
No 321
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.73 E-value=0.00034 Score=30.77 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=29.3
Q ss_pred CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc
Q psy3639 39 HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC 75 (113)
Q Consensus 39 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~ 75 (113)
....|..++|+ |...+++.++.+|.|.++.+ +++.
T Consensus 10 l~~~v~~~~w~-P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 10 LPSRVSCMSWC-PTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCCcEEEEEEC-CCCCEEEEEECCCeEEEEEC-CCcC
Confidence 34568999999 77889999999999999988 5543
No 322
>KOG2114|consensus
Probab=97.72 E-value=0.00099 Score=45.51 Aligned_cols=106 Identities=14% Similarity=0.210 Sum_probs=71.9
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCe-EEEEEEcCCCCCEEEEEeCCC-----cEEEEeCCcc---
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNV-VYAVAFSEPYGDKILTGSFDK-----TLKLWASAKE--- 73 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~-----~v~~wd~~~~--- 73 (113)
+.++++++..++.|+.+|.|.+.+-. -+.++.++.+... +..+-.. .....+++.+.|+ .+++|++...
T Consensus 28 isc~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~-~~~~~L~sv~Ed~~~np~llkiw~lek~~~n 105 (933)
T KOG2114|consen 28 ISCCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYIL-NKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN 105 (933)
T ss_pred eeEEcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcc-cCceEEEEEeecCCCCceEEEEecccccCCC
Confidence 56889999999999999998887742 3444666666555 4444333 4445777766664 4899997543
Q ss_pred ---ccc---eee----cccccceEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 74 ---ECI---QTY----RGHSAEVVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 74 ---~~~---~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
+++ +.+ .....++..++.+.+-..+++|-.+|.|..+
T Consensus 106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~ 152 (933)
T KOG2114|consen 106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICY 152 (933)
T ss_pred CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEE
Confidence 222 111 1124567888999888889999999988765
No 323
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.71 E-value=0.0033 Score=38.52 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=70.8
Q ss_pred ceEcC-CCCEEEeeecCCe-EEEeeCCCCeeeEEeeCCCCe--EEEEEEcCCCCCEEEEEeC-----CCcEEEEeCC-cc
Q psy3639 4 PRVTS-SPQRCLTGSYDRT-CKLWDIKSGHEICTYRGHQNV--VYAVAFSEPYGDKILTGSF-----DKTLKLWASA-KE 73 (113)
Q Consensus 4 ~~~~~-~~~~~~~~~~d~~-v~i~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~-----~~~v~~wd~~-~~ 73 (113)
.+.+| .+..++.+-..|. ..+||..+++..+.+...... --.-.|+ ++++++++.-. .|.|-+||.. ..
T Consensus 10 ~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs-~dG~~LytTEnd~~~g~G~IgVyd~~~~~ 88 (305)
T PF07433_consen 10 VAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFS-PDGRLLYTTENDYETGRGVIGVYDAARGY 88 (305)
T ss_pred eeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEc-CCCCEEEEeccccCCCcEEEEEEECcCCc
Confidence 35667 4556667766665 458999999888776543222 2245677 88888887654 4789999998 56
Q ss_pred ccceeecccccceEEEEEccCCCEEEEee
Q psy3639 74 ECIQTYRGHSAEVVGVTFSPDQSTFCSCS 102 (113)
Q Consensus 74 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 102 (113)
+.+.++..+.-.-..+.+.|+|+.|+++.
T Consensus 89 ~ri~E~~s~GIGPHel~l~pDG~tLvVAN 117 (305)
T PF07433_consen 89 RRIGEFPSHGIGPHELLLMPDGETLVVAN 117 (305)
T ss_pred EEEeEecCCCcChhhEEEcCCCCEEEEEc
Confidence 77788887776778899999998888764
No 324
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.71 E-value=0.0034 Score=38.49 Aligned_cols=99 Identities=9% Similarity=0.089 Sum_probs=69.1
Q ss_pred eEcCCCCEEEee-----ecCCeEEEeeCC-CCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-------CC--------
Q psy3639 5 RVTSSPQRCLTG-----SYDRTCKLWDIK-SGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-------DK-------- 63 (113)
Q Consensus 5 ~~~~~~~~~~~~-----~~d~~v~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~-------- 63 (113)
.|+++|++|++. ...|.|-+||.. +-+.+.++..+.-.-..+.+. ++++.|+.++. .|
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~-pDG~tLvVANGGI~Thpd~GR~kLNl~t 135 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLM-PDGETLVVANGGIETHPDSGRAKLNLDT 135 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEc-CCCCEEEEEcCCCccCcccCceecChhh
Confidence 689999987764 335889999998 556788888777777888888 77766666543 12
Q ss_pred ---cEEEEeCCccccceeec----ccccceEEEEEccCCCEEEEeecC
Q psy3639 64 ---TLKLWASAKEECIQTYR----GHSAEVVGVTFSPDQSTFCSCSMD 104 (113)
Q Consensus 64 ---~v~~wd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~ 104 (113)
.+..-|..+++.+.+.. -+...+.++++.++|..++.....
T Consensus 136 M~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~q 183 (305)
T PF07433_consen 136 MQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQ 183 (305)
T ss_pred cCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecC
Confidence 23344556666555532 255689999999998876665443
No 325
>KOG1920|consensus
Probab=97.67 E-value=0.00097 Score=47.05 Aligned_cols=107 Identities=11% Similarity=0.172 Sum_probs=68.8
Q ss_pred ceEcCCCCEEEee-----ecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC---CCcEEEEeCCc---
Q psy3639 4 PRVTSSPQRCLTG-----SYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF---DKTLKLWASAK--- 72 (113)
Q Consensus 4 ~~~~~~~~~~~~~-----~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~v~~wd~~~--- 72 (113)
++|--+|+++++. ...+.+++||.+ +..-.+-......-.+++|- |.|..+++--. ++.|.++....
T Consensus 201 IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWk-Psgs~iA~iq~~~sd~~IvffErNGL~h 278 (1265)
T KOG1920|consen 201 ISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWK-PSGSLIAAIQCKTSDSDIVFFERNGLRH 278 (1265)
T ss_pred EEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeec-CCCCeEeeeeecCCCCcEEEEecCCccc
Confidence 4567788888873 323789999976 44332222233344688999 56777766433 45688886432
Q ss_pred cccceeecccccceEEEEEccCCCEEEE---eecCCcEEEeec
Q psy3639 73 EECIQTYRGHSAEVVGVTFSPDQSTFCS---CSMDHTARIFNT 112 (113)
Q Consensus 73 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~i~~~~~ 112 (113)
+.....+.....++..++|+.++..|++ ......|++|-+
T Consensus 279 g~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 279 GEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred cccccCCcccccchheeeecCCCCceeeeecccccceEEEEEe
Confidence 2323333434455899999999999887 444556999964
No 326
>KOG1832|consensus
Probab=97.63 E-value=0.00011 Score=50.49 Aligned_cols=81 Identities=19% Similarity=0.242 Sum_probs=67.1
Q ss_pred eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCC--cEE
Q psy3639 31 HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDH--TAR 108 (113)
Q Consensus 31 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~ 108 (113)
+.+.++..+....++++|+ ...+.++.|+..|.|++++..+|........|.+.+..+.-+.+|..+++.+.-. -..
T Consensus 1092 r~w~~frd~~~~fTc~afs-~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFS-GGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred ccchhhhccccceeeEEee-cCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHH
Confidence 4566777788999999999 8889999999999999999999998899999999999999888999887655432 234
Q ss_pred Eeec
Q psy3639 109 IFNT 112 (113)
Q Consensus 109 ~~~~ 112 (113)
+|++
T Consensus 1171 LW~~ 1174 (1516)
T KOG1832|consen 1171 LWDA 1174 (1516)
T ss_pred Hhcc
Confidence 4543
No 327
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.62 E-value=0.005 Score=41.28 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=35.2
Q ss_pred CcEEEEeCCc-----cccceeecccccceEEEEEccCCCEEEEeec-CCcEEEeecC
Q psy3639 63 KTLKLWASAK-----EECIQTYRGHSAEVVGVTFSPDQSTFCSCSM-DHTARIFNTM 113 (113)
Q Consensus 63 ~~v~~wd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 113 (113)
+.|.+.|..+ .+.+..+. -....+.+.++|||+++++++. ++++.+.|++
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~ 351 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVR 351 (635)
T ss_pred CEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEECh
Confidence 4577777776 23333333 3445688999999999877665 7899999873
No 328
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.61 E-value=0.0042 Score=36.80 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=62.2
Q ss_pred eEc-CCCCEEEeeecCCeEEEeeCCCCeeeEEeeC-----CCCeEEEEEEcCCCCCEEEEEeCC--------CcEEEEeC
Q psy3639 5 RVT-SSPQRCLTGSYDRTCKLWDIKSGHEICTYRG-----HQNVVYAVAFSEPYGDKILTGSFD--------KTLKLWAS 70 (113)
Q Consensus 5 ~~~-~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~--------~~v~~wd~ 70 (113)
++. ++ ..++.+...+ +.++|..+++....... ......++++. ++|.+.++.... |.+..++.
T Consensus 46 ~~~~~~-g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd-~~G~ly~t~~~~~~~~~~~~g~v~~~~~ 122 (246)
T PF08450_consen 46 AFDRPD-GRLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVD-PDGNLYVTDSGGGGASGIDPGSVYRIDP 122 (246)
T ss_dssp EEECTT-SEEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE--TTS-EEEEEECCBCTTCGGSEEEEEEET
T ss_pred EEEccC-CEEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEc-CCCCEEEEecCCCccccccccceEEECC
Confidence 344 44 4445555544 56669888764433322 34567899999 778877776654 44666776
Q ss_pred CccccceeecccccceEEEEEccCCCEEEE-eecCCcEEEeec
Q psy3639 71 AKEECIQTYRGHSAEVVGVTFSPDQSTFCS-CSMDHTARIFNT 112 (113)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~i~~~~~ 112 (113)
. ++. ......-...+.++|+|+++.|++ -+..+.|..+++
T Consensus 123 ~-~~~-~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~ 163 (246)
T PF08450_consen 123 D-GKV-TVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDL 163 (246)
T ss_dssp T-SEE-EEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred C-CeE-EEEecCcccccceEECCcchheeecccccceeEEEec
Confidence 6 442 323223445688999999997764 455677777764
No 329
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.60 E-value=0.0047 Score=43.50 Aligned_cols=106 Identities=14% Similarity=0.167 Sum_probs=68.5
Q ss_pred cceEcCCCCEEEeeec---CCeEEEeeCCCCeee--EEee--CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc
Q psy3639 3 VPRVTSSPQRCLTGSY---DRTCKLWDIKSGHEI--CTYR--GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC 75 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~---d~~v~i~~~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~ 75 (113)
..+|-|+|+++++... ...|.+|.- .|-.- +.+. .....+..+.|+ +++..++....|. |.+|-..+...
T Consensus 261 ~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn-~ds~iLAv~~~~~-vqLWt~~NYHW 337 (928)
T PF04762_consen 261 ALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWN-SDSEILAVWLEDR-VQLWTRSNYHW 337 (928)
T ss_pred CccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEEC-CCCCEEEEEecCC-ceEEEeeCCEE
Confidence 5688999999998765 344555653 23222 2222 356689999999 8899998877655 99998776543
Q ss_pred ce--eecc-cccceEEEEEcc-CCCEEEEeecCCcEEEee
Q psy3639 76 IQ--TYRG-HSAEVVGVTFSP-DQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 76 ~~--~~~~-~~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~ 111 (113)
.. .+.. ....+..+.|+| +...|...+.+|.+..++
T Consensus 338 YLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~ 377 (928)
T PF04762_consen 338 YLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYD 377 (928)
T ss_pred EEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEE
Confidence 22 2221 223344589999 445577777767766654
No 330
>KOG0882|consensus
Probab=97.52 E-value=0.0028 Score=40.64 Aligned_cols=98 Identities=14% Similarity=0.122 Sum_probs=71.7
Q ss_pred eeecCCeEEEeeCCCCe--eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc------cccceee-------
Q psy3639 15 TGSYDRTCKLWDIKSGH--EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK------EECIQTY------- 79 (113)
Q Consensus 15 ~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~------~~~~~~~------- 79 (113)
+.-+++.+.++|-.... ....-.-|..+|..+..+ +.+..+.+....|.|.-|.... .+....+
T Consensus 117 s~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~-qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy 195 (558)
T KOG0882|consen 117 SLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYN-QAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLY 195 (558)
T ss_pred ecccCCCcEEECCcCCcCccceecccccCceEEEEee-ccccceeeccccceeEeecCCCcccCccccccccccccchhh
Confidence 34557889999965443 233334599999999999 7788899999999999997652 1111112
Q ss_pred --cccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 80 --RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 80 --~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
.-......++.|+|+|..+.+-..|..|++++++
T Consensus 196 ~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~K 231 (558)
T KOG0882|consen 196 GFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFK 231 (558)
T ss_pred cccccccCccceEEccccCcccccCcccEEEEEEec
Confidence 1223456789999999999999999999998763
No 331
>KOG2041|consensus
Probab=97.51 E-value=0.0003 Score=47.42 Aligned_cols=109 Identities=14% Similarity=0.082 Sum_probs=77.7
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEe--eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTY--RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY 79 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~ 79 (113)
.++.|+.+.+.+.++..+|.|.+|=+..++=...+ ...++.|.+++|+ .+|..++....||.|.+=.+... .+.--
T Consensus 75 ~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn-~dG~kIcIvYeDGavIVGsvdGN-RIwgK 152 (1189)
T KOG2041|consen 75 MVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWN-LDGTKICIVYEDGAVIVGSVDGN-RIWGK 152 (1189)
T ss_pred EEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEc-CCCcEEEEEEccCCEEEEeeccc-eecch
Confidence 35567788888999999999999988766422111 2245678999999 89999999999999876544322 22211
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.-......++.|++|.+.++.+-.+|..+++|.
T Consensus 153 eLkg~~l~hv~ws~D~~~~Lf~~ange~hlydn 185 (1189)
T KOG2041|consen 153 ELKGQLLAHVLWSEDLEQALFKKANGETHLYDN 185 (1189)
T ss_pred hcchheccceeecccHHHHHhhhcCCcEEEecc
Confidence 111233457899999988888888888888874
No 332
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.48 E-value=0.0016 Score=39.99 Aligned_cols=109 Identities=19% Similarity=0.355 Sum_probs=69.6
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCe-----eeEEeeCC------------CCeEEEEEEcCCCC-CEEEEEeCCCc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGH-----EICTYRGH------------QNVVYAVAFSEPYG-DKILTGSFDKT 64 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~-----~~~~~~~~------------~~~v~~~~~~~~~~-~~~~~~~~~~~ 64 (113)
.+.+...|.++++|...|.|.+|.-.... -...+++| ...|..+.|..+.+ ..+...+.|.+
T Consensus 31 aVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNdkt 110 (460)
T COG5170 31 AVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTNDKT 110 (460)
T ss_pred EEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCCce
Confidence 45567788999999999999998754322 11223333 34577888874433 35666778899
Q ss_pred EEEEeCCccc-------------------------c--cee---------------e-cccccceEEEEEccCCCEEEEe
Q psy3639 65 LKLWASAKEE-------------------------C--IQT---------------Y-RGHSAEVVGVTFSPDQSTFCSC 101 (113)
Q Consensus 65 v~~wd~~~~~-------------------------~--~~~---------------~-~~~~~~v~~~~~~~~~~~~~~~ 101 (113)
|++|.+.... . +.. + ..|.-.+.+++++.+..+++++
T Consensus 111 iKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSa 190 (460)
T COG5170 111 IKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKETLLSA 190 (460)
T ss_pred eeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchheeeec
Confidence 9999753220 0 000 0 2244456788888888877766
Q ss_pred ecCCcEEEeec
Q psy3639 102 SMDHTARIFNT 112 (113)
Q Consensus 102 ~~~~~i~~~~~ 112 (113)
.|=.|.+|++
T Consensus 191 -DdLrINLWnl 200 (460)
T COG5170 191 -DDLRINLWNL 200 (460)
T ss_pred -cceeeeeccc
Confidence 4567888875
No 333
>KOG2395|consensus
Probab=97.44 E-value=0.0028 Score=41.44 Aligned_cols=95 Identities=14% Similarity=0.171 Sum_probs=61.8
Q ss_pred EeeecCCeEEEeeCCCCee--eEEeeCC----CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceE
Q psy3639 14 LTGSYDRTCKLWDIKSGHE--ICTYRGH----QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVV 87 (113)
Q Consensus 14 ~~~~~d~~v~i~~~~~~~~--~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~ 87 (113)
+.|-.+..|+-||++-... +..-++| .....|++-. ...+++.|+.+|.|++||--.......+++...+|.
T Consensus 398 lvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT--~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~ 475 (644)
T KOG2395|consen 398 LVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT--ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIK 475 (644)
T ss_pred EEeecCCceEEecccccCcceeeeeeccccccccccceeeec--CCceEEEeecCCcEEeehhhhhhhhhcccccCCcee
Confidence 3455567788888764322 2222222 2334555543 345788999999999999744445566777889999
Q ss_pred EEEEccCCCEEEEeecCCcEEEee
Q psy3639 88 GVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
++..+.+|.+++..+. ..+.+-+
T Consensus 476 hVdvtadGKwil~Tc~-tyLlLi~ 498 (644)
T KOG2395|consen 476 HVDVTADGKWILATCK-TYLLLID 498 (644)
T ss_pred eEEeeccCcEEEEecc-cEEEEEE
Confidence 9999999998766553 3444443
No 334
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.44 E-value=0.0097 Score=36.96 Aligned_cols=109 Identities=9% Similarity=0.127 Sum_probs=68.7
Q ss_pred cceEcCCCCEEEeeec---CCeEEEeeCCC--Ceee--EEeeCCCCeEEEEEEcCCCCCEEEEEeC-CCcEEEEeCCc-c
Q psy3639 3 VPRVTSSPQRCLTGSY---DRTCKLWDIKS--GHEI--CTYRGHQNVVYAVAFSEPYGDKILTGSF-DKTLKLWASAK-E 73 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~---d~~v~i~~~~~--~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~v~~wd~~~-~ 73 (113)
..+++++.++|.++.+ ++.|.-|.++. |+.. ........+-+.++++ ++++++++++. .|.|.++-++. +
T Consensus 44 yl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd-~~g~~vf~AnY~~g~v~v~p~~~dG 122 (346)
T COG2706 44 YLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVD-EDGRFVFVANYHSGSVSVYPLQADG 122 (346)
T ss_pred eEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEEC-CCCCEEEEEEccCceEEEEEcccCC
Confidence 3578889988877655 46677776654 4432 2222233444889998 77877776655 57899998755 3
Q ss_pred ccce--eecccccc----------eEEEEEccCCCEEEEeecC-CcEEEeec
Q psy3639 74 ECIQ--TYRGHSAE----------VVGVTFSPDQSTFCSCSMD-HTARIFNT 112 (113)
Q Consensus 74 ~~~~--~~~~~~~~----------v~~~~~~~~~~~~~~~~~~-~~i~~~~~ 112 (113)
.... ....|.+. +....+.|+++++++.+-. ..|.+|++
T Consensus 123 ~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 123 SLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred ccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 2111 11112222 7888999999999887653 35777765
No 335
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.44 E-value=0.0071 Score=35.38 Aligned_cols=99 Identities=16% Similarity=0.077 Sum_probs=65.4
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCe-----------EEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNV-----------VYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~ 77 (113)
.++.++.+..++.+..+|.++|+.+........+ .....+ .++ .++.+..++.+..+|..+++.+.
T Consensus 121 ~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~v~~~~~~g~~~~~d~~tg~~~w 197 (238)
T PF13360_consen 121 DGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVI--SDG-RVYVSSGDGRVVAVDLATGEKLW 197 (238)
T ss_dssp ETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEEC--CTT-EEEEECCTSSEEEEETTTTEEEE
T ss_pred ecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEE--ECC-EEEEEcCCCeEEEEECCCCCEEE
Confidence 4677888888899999999999998877653322 122222 234 66667777754444999998655
Q ss_pred eecccccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
... ...... ...+.+..+++.+.++.+..||++
T Consensus 198 ~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~ 230 (238)
T PF13360_consen 198 SKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDLK 230 (238)
T ss_dssp EEC--SS-ECE-CEECCCTEEEEEETTTEEEEEETT
T ss_pred Eec--CCCccC-CceeeCCEEEEEeCCCEEEEEECC
Confidence 333 222222 134577788888899999999974
No 336
>KOG1008|consensus
Probab=97.44 E-value=5.8e-05 Score=49.77 Aligned_cols=108 Identities=11% Similarity=0.210 Sum_probs=66.5
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe-CCcc-ccceeec
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA-SAKE-ECIQTYR 80 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd-~~~~-~~~~~~~ 80 (113)
.+|+..+.+++++|...+.+.++|++..- .......+..+..+...|-.+.++++-. ||.|-+|| .+.- ..+..+.
T Consensus 159 s~cwlrd~klvlaGm~sr~~~ifdlRqs~-~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~ 236 (783)
T KOG1008|consen 159 SVCWLRDTKLVLAGMTSRSVHIFDLRQSL-DSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIIL 236 (783)
T ss_pred ccccccCcchhhcccccchhhhhhhhhhh-hhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHh
Confidence 45666677788888888889999887221 1111113344566677754677776655 89999999 4332 2333333
Q ss_pred ccc----cceEEEEEccCCCE-EEE-eecCCcEEEeec
Q psy3639 81 GHS----AEVVGVTFSPDQST-FCS-CSMDHTARIFNT 112 (113)
Q Consensus 81 ~~~----~~v~~~~~~~~~~~-~~~-~~~~~~i~~~~~ 112 (113)
..+ ..+..++|+|...- +++ ....++|+.+|+
T Consensus 237 ~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi 274 (783)
T KOG1008|consen 237 RNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDI 274 (783)
T ss_pred hCCCCcccceeeEEeccCCcchhhhhccCcceEEEecc
Confidence 222 24889999994432 333 344577888875
No 337
>KOG1008|consensus
Probab=97.42 E-value=3e-05 Score=51.06 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=73.5
Q ss_pred CEEEeeecCCeEEEeeCCCCe--eeEEeeCCCCeEEEEEEcCCCCCEEEEEeC----CCcEEEEeCCcc--ccc--eeec
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGH--EICTYRGHQNVVYAVAFSEPYGDKILTGSF----DKTLKLWASAKE--ECI--QTYR 80 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~v~~wd~~~~--~~~--~~~~ 80 (113)
.+++.|..+|.|.+-..+... .-....++..++++++|++-+.+.+++|-. |-.+.+||+.+. .+. ..+.
T Consensus 71 cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs 150 (783)
T KOG1008|consen 71 CILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFS 150 (783)
T ss_pred hhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccc
Confidence 478889899999887765432 123445688899999999777777777744 456999999876 111 1122
Q ss_pred c-cccceEEEEEccCCCEEEEeecCCcEEEeecC
Q psy3639 81 G-HSAEVVGVTFSPDQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 81 ~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (113)
+ ......+++|-.+.+.+.+|...+.++++|+|
T Consensus 151 ~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlR 184 (783)
T KOG1008|consen 151 SSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLR 184 (783)
T ss_pred cccccCccccccccCcchhhcccccchhhhhhhh
Confidence 2 23345578888888888888888899999875
No 338
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.41 E-value=0.011 Score=37.55 Aligned_cols=98 Identities=13% Similarity=0.117 Sum_probs=61.4
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCC--e--------E-EEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQN--V--------V-YAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~--~--------v-~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~ 77 (113)
.+..+++.+.++.+.-+|.++|+.+...+.... . + ..... .+..++.++.++.+..+|..+++.+.
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~v~v~~~~g~l~ald~~tG~~~W 144 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV---AGGKVYIGSEKGQVYALNAEDGEVAW 144 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE---ECCEEEEEcCCCEEEEEECCCCCCcc
Confidence 355677777788999999999988776643220 0 0 01111 24566777888999999999998877
Q ss_pred eecccccceEE-EEEccCCCEEEEeecCCcEEEeec
Q psy3639 78 TYRGHSAEVVG-VTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+..... .+.+ ... .+..++++..++.+.-+|.
T Consensus 145 ~~~~~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~ 177 (394)
T PRK11138 145 QTKVAG-EALSRPVV--SDGLVLVHTSNGMLQALNE 177 (394)
T ss_pred cccCCC-ceecCCEE--ECCEEEEECCCCEEEEEEc
Confidence 765432 2211 111 2345666666777777664
No 339
>KOG0882|consensus
Probab=97.41 E-value=0.0032 Score=40.38 Aligned_cols=107 Identities=8% Similarity=-0.025 Sum_probs=71.7
Q ss_pred eEcCCCCEEEeeec-CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCC----CEEEEEeCCCcEEEEeCCccc--cce
Q psy3639 5 RVTSSPQRCLTGSY-DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG----DKILTGSFDKTLKLWASAKEE--CIQ 77 (113)
Q Consensus 5 ~~~~~~~~~~~~~~-d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~v~~wd~~~~~--~~~ 77 (113)
+.+.++.++.+.+. |..++++|+.....+..++-- ..-..+.|....+ ...++.-.++.+.++|-.... ...
T Consensus 60 ~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~-~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~ 138 (558)
T KOG0882|consen 60 AVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLV-DLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGY 138 (558)
T ss_pred hccccceeEeeccCcccceeEEEeeccchhhhcccc-cCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccce
Confidence 45667788888777 999999998766544333211 1112222321223 233445557899999976543 233
Q ss_pred eecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 78 TYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 78 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.-.-|.++|..+.++|.+..+++....|.|..|..
T Consensus 139 fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~ 173 (558)
T KOG0882|consen 139 FKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSA 173 (558)
T ss_pred ecccccCceEEEEeeccccceeeccccceeEeecC
Confidence 33457889999999999999999999999999965
No 340
>KOG3617|consensus
Probab=97.41 E-value=0.0011 Score=45.72 Aligned_cols=67 Identities=10% Similarity=0.058 Sum_probs=56.5
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA 71 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~ 71 (113)
.||+|..-.++.|-+-|.+.+|...+.+.-.....|+.++..+.|+ ++|..++++..-|.+.+|...
T Consensus 65 LCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS-~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 65 LCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWS-HDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEec-CCCCeEEEcCCCceeEEEEee
Confidence 4677777778888888999999987666555556799999999999 889999999999999999653
No 341
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.34 E-value=0.015 Score=37.10 Aligned_cols=108 Identities=15% Similarity=0.147 Sum_probs=62.3
Q ss_pred cceEcCCCCEEEee-ecC----CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCC-----------cEE
Q psy3639 3 VPRVTSSPQRCLTG-SYD----RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDK-----------TLK 66 (113)
Q Consensus 3 ~~~~~~~~~~~~~~-~~d----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----------~v~ 66 (113)
...++|++++++.+ +.. ..++++|+++++.+...-.... ...+.|. +++..++....+. .|.
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~-~~~~~W~-~d~~~~~y~~~~~~~~~~~~~~~~~v~ 205 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPK-FSSVSWS-DDGKGFFYTRFDEDQRTSDSGYPRQVY 205 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEE-SEEEEEC-TTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccc-cceEEEe-CCCCEEEEEEeCcccccccCCCCcEEE
Confidence 35689999988754 332 4489999999976643211111 1239999 6666655444332 267
Q ss_pred EEeCCccccc--eeecccccc--eEEEEEccCCCEEEEeecC----CcEEEeec
Q psy3639 67 LWASAKEECI--QTYRGHSAE--VVGVTFSPDQSTFCSCSMD----HTARIFNT 112 (113)
Q Consensus 67 ~wd~~~~~~~--~~~~~~~~~--v~~~~~~~~~~~~~~~~~~----~~i~~~~~ 112 (113)
.|.+.+...- ..+...... ...+..++++++++..... ..+.+.|+
T Consensus 206 ~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~ 259 (414)
T PF02897_consen 206 RHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDL 259 (414)
T ss_dssp EEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEEC
T ss_pred EEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEec
Confidence 7777665322 334333322 5578889999988754332 23555543
No 342
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.34 E-value=0.014 Score=39.19 Aligned_cols=99 Identities=8% Similarity=-0.034 Sum_probs=54.7
Q ss_pred cceEcCCCCEEEeee------cCC--eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCC------------
Q psy3639 3 VPRVTSSPQRCLTGS------YDR--TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFD------------ 62 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~------~d~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------ 62 (113)
-.+++|+++.++... .|. .+.+++.. +.. ..+.. ......-.|+ +++..+++....
T Consensus 354 spaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~-g~~~t~PsWs-pDG~~lw~v~dg~~~~~v~~~~~~ 429 (591)
T PRK13616 354 SAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLE-GHSLTRPSWS-LDADAVWVVVDGNTVVRVIRDPAT 429 (591)
T ss_pred cceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeec-CCCCCCceEC-CCCCceEEEecCcceEEEeccCCC
Confidence 346889998776544 233 34444532 222 22221 2236778888 666655554322
Q ss_pred CcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEE
Q psy3639 63 KTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARI 109 (113)
Q Consensus 63 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 109 (113)
+.+.+.++..++... .....|..+.|||||..++... ++.+++
T Consensus 430 gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 430 GQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred ceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 223333343333211 2345799999999999887655 456655
No 343
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.32 E-value=0.013 Score=39.48 Aligned_cols=102 Identities=13% Similarity=0.098 Sum_probs=69.6
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCC----C-eeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCCcEEEEeCCcccc----
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKS----G-HEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDKTLKLWASAKEEC---- 75 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~----~-~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~v~~wd~~~~~~---- 75 (113)
+.++|++...+ +..|.+.|..+ + +.+..+. -......+.++ |++++++ ++..++++.+.|+...+.
T Consensus 284 ~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vS-PDGkylyVanklS~tVSVIDv~k~k~~~~~ 359 (635)
T PRK02888 284 AVKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTS-PDGKYFIANGKLSPTVTVIDVRKLDDLFDG 359 (635)
T ss_pred hhhCCCEEEEC--CCEEEEEECCccccCCcceEEEEE-CCCCccceEEC-CCCCEEEEeCCCCCcEEEEEChhhhhhhhc
Confidence 34466655543 46789999887 3 3444444 44556889999 6677655 555589999999877543
Q ss_pred --------ceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 --------IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 --------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...... ...-.+.+|+++|+...+--.|..|..||+
T Consensus 360 ~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~ 403 (635)
T PRK02888 360 KIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNI 403 (635)
T ss_pred cCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEeh
Confidence 222222 223356899999988888888999999986
No 344
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.32 E-value=0.015 Score=40.25 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=66.0
Q ss_pred CEEEee-ecCCeEEEeeCCCCeeeEEeeCCCCe-EEEEEEcC----CCCCEEEEEeCCCcEEEEeCCccc--cce----e
Q psy3639 11 QRCLTG-SYDRTCKLWDIKSGHEICTYRGHQNV-VYAVAFSE----PYGDKILTGSFDKTLKLWASAKEE--CIQ----T 78 (113)
Q Consensus 11 ~~~~~~-~~d~~v~i~~~~~~~~~~~~~~~~~~-v~~~~~~~----~~~~~~~~~~~~~~v~~wd~~~~~--~~~----~ 78 (113)
++++.. .....++-.|+..|+.+..++.+... |..++-.. -.+..-..|-.++.+..||++-.. .+. .
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~ 573 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQ 573 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccc
Confidence 344443 34577888899999999999877654 66554321 123445667778889999998642 221 1
Q ss_pred ecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 79 YRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
+ .......+++-+.+| ++++|+.+|.|++||
T Consensus 574 Y-~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd 604 (794)
T PF08553_consen 574 Y-SSKNNFSCFATTEDG-YIAVGSNKGDIRLYD 604 (794)
T ss_pred c-ccCCCceEEEecCCc-eEEEEeCCCcEEeec
Confidence 1 123455667766666 589999999999997
No 345
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.29 E-value=0.0032 Score=39.46 Aligned_cols=95 Identities=21% Similarity=0.217 Sum_probs=57.6
Q ss_pred cCCCCEEEeee---------cCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce
Q psy3639 7 TSSPQRCLTGS---------YDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ 77 (113)
Q Consensus 7 ~~~~~~~~~~~---------~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~ 77 (113)
||++++++... ..+.+.+||+.+++...... ....+....|+ |+++.++-.. ++.+.+.+..+++..+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~-~~~~~~~~~~s-P~g~~~~~v~-~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTP-PPPKLQDAKWS-PDGKYIAFVR-DNNLYLRDLATGQETQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS--EETTBSEEEE--SSSTEEEEEE-TTEEEEESSTTSEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcC-Cccccccceee-cCCCeeEEEe-cCceEEEECCCCCeEE
Confidence 57777777632 24667899998876543333 25667889999 7788877665 4678888876553221
Q ss_pred -eecc---------------c-ccceEEEEEccCCCEEEEeecC
Q psy3639 78 -TYRG---------------H-SAEVVGVTFSPDQSTFCSCSMD 104 (113)
Q Consensus 78 -~~~~---------------~-~~~v~~~~~~~~~~~~~~~~~~ 104 (113)
+..+ . -+.-..+-|||+|++|+....|
T Consensus 78 lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d 121 (353)
T PF00930_consen 78 LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFD 121 (353)
T ss_dssp SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEEC
Confidence 1111 0 1123568899999999876554
No 346
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.27 E-value=0.015 Score=37.78 Aligned_cols=55 Identities=18% Similarity=0.156 Sum_probs=35.5
Q ss_pred CCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 53 GDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 53 ~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
|.++...+.+ .|.+||..+++.+..+... +|..+.|+++|++++..+.+ .+.+++
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 5566555544 7999999999988888743 38899999999999888755 555554
No 347
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.22 E-value=0.013 Score=37.89 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=56.4
Q ss_pred cceEcCCCCEEEe-eecCCe--EEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCCc--EEEEeCCccccc
Q psy3639 3 VPRVTSSPQRCLT-GSYDRT--CKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDKT--LKLWASAKEECI 76 (113)
Q Consensus 3 ~~~~~~~~~~~~~-~~~d~~--v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~--v~~wd~~~~~~~ 76 (113)
..+|+|+|+.++. ...|+. |+++|+..+... .+....+.-..-.|+ |+|+.++ +.+..|. |.++++..+..
T Consensus 242 ~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~Lt~~~gi~~~Ps~s-pdG~~ivf~Sdr~G~p~I~~~~~~g~~~- 318 (425)
T COG0823 242 APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-RLTNGFGINTSPSWS-PDGSKIVFTSDRGGRPQIYLYDLEGSQV- 318 (425)
T ss_pred CccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-ecccCCccccCccCC-CCCCEEEEEeCCCCCcceEEECCCCCce-
Confidence 4578999987664 445555 555666655533 344333333466678 6666554 5555565 55556655543
Q ss_pred eeecccccceEEEEEccCCCEEEEeec
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
..+......-..-.|+|+|++++..+.
T Consensus 319 ~riT~~~~~~~~p~~SpdG~~i~~~~~ 345 (425)
T COG0823 319 TRLTFSGGGNSNPVWSPDGDKIVFESS 345 (425)
T ss_pred eEeeccCCCCcCccCCCCCCEEEEEec
Confidence 333222222226788999999887664
No 348
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.20 E-value=0.017 Score=34.62 Aligned_cols=105 Identities=10% Similarity=0.201 Sum_probs=61.0
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCC---CeeeEEe--------eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKS---GHEICTY--------RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK 72 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~---~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~ 72 (113)
.++++..+.++.+-+.....+|.+.. ...+... ......+..+.++|..+++++-...+..+..+| .+
T Consensus 123 la~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~ 201 (248)
T PF06977_consen 123 LAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQ 201 (248)
T ss_dssp EEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT
T ss_pred EEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CC
Confidence 47888888777777776667776643 2111111 113345789999988888888888888999999 55
Q ss_pred cccceeeccc---------ccceEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 73 EECIQTYRGH---------SAEVVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 73 ~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
++.+..+.-. -.+.-.++|.++|+.. ..++.+..++|
T Consensus 202 G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LY-IvsEpNlfy~f 247 (248)
T PF06977_consen 202 GRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLY-IVSEPNLFYRF 247 (248)
T ss_dssp --EEEEEE-STTGGG-SS---SEEEEEE-TT--EE-EEETTTEEEEE
T ss_pred CCEEEEEEeCCcccCcccccCCccEEEECCCCCEE-EEcCCceEEEe
Confidence 6544433311 1346789999999754 45567766655
No 349
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.18 E-value=0.019 Score=35.55 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=64.3
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCe-eeEEee-CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc-cccceeecc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGH-EICTYR-GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK-EECIQTYRG 81 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~-~~~~~~~~~ 81 (113)
++.+-+..++.+. ...+.+|++...+ ....-. .....+.++... ++.++.|+....+.++..+. ...+..+..
T Consensus 93 ai~~~~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~---~~~I~vgD~~~sv~~~~~~~~~~~l~~va~ 168 (321)
T PF03178_consen 93 AICSFNGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF---KNYILVGDAMKSVSLLRYDEENNKLILVAR 168 (321)
T ss_dssp EEEEETTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE---TTEEEEEESSSSEEEEEEETTTE-EEEEEE
T ss_pred EhhhhCCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc---ccEEEEEEcccCEEEEEEEccCCEEEEEEe
Confidence 4444344555544 4789999987776 332222 133367777765 56889999888888774432 222333322
Q ss_pred --cccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 82 --HSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 82 --~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
....+.++.+-++++.+++++.+|.+.++..
T Consensus 169 d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~ 201 (321)
T PF03178_consen 169 DYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRY 201 (321)
T ss_dssp ESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE
T ss_pred cCCCccEEEEEEecCCcEEEEEcCCCeEEEEEE
Confidence 2445777888766678999999999988754
No 350
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.16 E-value=0.0097 Score=31.08 Aligned_cols=65 Identities=15% Similarity=0.264 Sum_probs=43.2
Q ss_pred EEEEEEcCCC---CCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 43 VYAVAFSEPY---GDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 43 v~~~~~~~~~---~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
|+++++..-+ ...|+.|+.|..|++|+- .+.+..+.. ...+..+.-... ..|+-+-.+|+|-+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence 4555554322 357899999999999974 344566653 345666665544 5577777888887775
No 351
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.15 E-value=0.02 Score=34.50 Aligned_cols=66 Identities=15% Similarity=0.107 Sum_probs=43.2
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE 74 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~ 74 (113)
|....++.++.|+++| +.+++........... +..+|..+...|. -+.++.- .|+.+.++++....
T Consensus 2 c~~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~-~~~llvL-sd~~l~~~~L~~l~ 67 (275)
T PF00780_consen 2 CADSWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPE-LNLLLVL-SDGQLYVYDLDSLE 67 (275)
T ss_pred CcccCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecc-cCEEEEE-cCCccEEEEchhhc
Confidence 3456788999999998 8899983333332332 3334899998844 4444444 34899999986653
No 352
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=97.15 E-value=0.036 Score=37.52 Aligned_cols=101 Identities=15% Similarity=0.259 Sum_probs=64.0
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEee-CCCCeEEEEEEcC-CCCCEEEEEeCCCcEEEEeCC---------ccccce
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYR-GHQNVVYAVAFSE-PYGDKILTGSFDKTLKLWASA---------KEECIQ 77 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~~wd~~---------~~~~~~ 77 (113)
.++..++.+....+.|||...+.....-. .....|.+++|.+ ++++.+.+.+..+.|.++--. +...+.
T Consensus 40 ~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~ 119 (631)
T PF12234_consen 40 IKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIR 119 (631)
T ss_pred cCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeE
Confidence 34444444445678999998776443322 3578899999953 667788888899999998421 112233
Q ss_pred ee--cccc-cceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 78 TY--RGHS-AEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 78 ~~--~~~~-~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.+ ..++ .+|.+..|-++|..++.+ ++.+.++|
T Consensus 120 ~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~d 154 (631)
T PF12234_consen 120 KIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFD 154 (631)
T ss_pred EEEeecCCCCCccceeEecCCeEEEEe--CCEEEEEC
Confidence 32 2233 468889999888755443 45666654
No 353
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=97.15 E-value=0.014 Score=34.31 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=50.9
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEE-------ee-------CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEE
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICT-------YR-------GHQNVVYAVAFSEPYGDKILTGSFDKTLKLW 68 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~-------~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~w 68 (113)
++.+..+++++++-+.+|.+++||+.+++.+.. +. .....|..+.++ .+|.-+++-+ +|..+.|
T Consensus 15 ~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt-~~G~PiV~ls-ng~~y~y 92 (219)
T PF07569_consen 15 VSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLT-SNGVPIVTLS-NGDSYSY 92 (219)
T ss_pred eEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEc-CCCCEEEEEe-CCCEEEe
Confidence 456777899999999999999999998765332 11 245678888888 7787776654 4778888
Q ss_pred eCCcc
Q psy3639 69 ASAKE 73 (113)
Q Consensus 69 d~~~~ 73 (113)
+..-+
T Consensus 93 ~~~L~ 97 (219)
T PF07569_consen 93 SPDLG 97 (219)
T ss_pred ccccc
Confidence 76443
No 354
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=97.11 E-value=0.0037 Score=26.83 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=23.3
Q ss_pred ceEEEEEccCC---CEEEEeecCCcEEEeecC
Q psy3639 85 EVVGVTFSPDQ---STFCSCSMDHTARIFNTM 113 (113)
Q Consensus 85 ~v~~~~~~~~~---~~~~~~~~~~~i~~~~~~ 113 (113)
.+.++.|+|.+ .+|+.+-..+.++++|+|
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 57889999844 477777778999999986
No 355
>KOG3621|consensus
Probab=97.10 E-value=0.0011 Score=44.39 Aligned_cols=69 Identities=17% Similarity=0.232 Sum_probs=54.4
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCee-----eEEe-eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHE-----ICTY-RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK 72 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~-----~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~ 72 (113)
+.+++++..+++.|+..|.|.++.+....+ +... +.|...|++++|+ +++..+++|...|+|.+-.+..
T Consensus 81 ~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws-~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 81 VRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWS-KNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred EEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEec-ccccEEeecCCCceEEEEEech
Confidence 456788889999999999999998765321 1111 2378899999999 8999999999999998876655
No 356
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.05 E-value=0.0061 Score=36.78 Aligned_cols=45 Identities=18% Similarity=0.403 Sum_probs=37.3
Q ss_pred CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccc
Q psy3639 40 QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE 85 (113)
Q Consensus 40 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~ 85 (113)
...|..+.++ |++..+++...+|.+.+|++.+.+........+++
T Consensus 229 ~d~i~kmSlS-Pdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eqP 273 (282)
T PF15492_consen 229 QDGIFKMSLS-PDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQP 273 (282)
T ss_pred CCceEEEEEC-CCCCEEEEEEcCCeEEEEecCcchhhcccchhhCC
Confidence 5678999999 88999999999999999999988776666544433
No 357
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.03 E-value=0.0098 Score=38.37 Aligned_cols=104 Identities=17% Similarity=0.158 Sum_probs=61.2
Q ss_pred ceEcCCCCEEEee---ecC-CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCC-EEEEEeCCCc--EEEEeCCccccc
Q psy3639 4 PRVTSSPQRCLTG---SYD-RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGD-KILTGSFDKT--LKLWASAKEECI 76 (113)
Q Consensus 4 ~~~~~~~~~~~~~---~~d-~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~--v~~wd~~~~~~~ 76 (113)
.+|+|+++.++.. ... ..+.++++.+++...... ....-..-+|+ |+++ ++++...||. +.+.|+.... +
T Consensus 198 p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fs-pDG~~l~f~~~rdg~~~iy~~dl~~~~-~ 274 (425)
T COG0823 198 PAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFS-PDGSKLAFSSSRDGSPDIYLMDLDGKN-L 274 (425)
T ss_pred cccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCC-CCCCEEEEEECCCCCccEEEEcCCCCc-c
Confidence 3567777654432 122 358888888877555444 33444567788 5555 4556666775 5555776665 3
Q ss_pred eeecccccceEEEEEccCCCEEEEeec-CCcEEEe
Q psy3639 77 QTYRGHSAEVVGVTFSPDQSTFCSCSM-DHTARIF 110 (113)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~ 110 (113)
..+....+.-..-.|+|+|+.++-.+. .|.-.||
T Consensus 275 ~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~ 309 (425)
T COG0823 275 PRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIY 309 (425)
T ss_pred eecccCCccccCccCCCCCCEEEEEeCCCCCcceE
Confidence 334433333346789999998865544 4544444
No 358
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.97 E-value=0.028 Score=33.10 Aligned_cols=68 Identities=12% Similarity=0.214 Sum_probs=48.5
Q ss_pred CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee-------c-------ccccceEEEEEccCCCEEEEeecCCc
Q psy3639 41 NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY-------R-------GHSAEVVGVTFSPDQSTFCSCSMDHT 106 (113)
Q Consensus 41 ~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~~~~~~~~~~ 106 (113)
.++..+... +.+++..+.+|.+++||+.+.+.+... . .....|..+.++.+|.-+++-+ +|.
T Consensus 13 s~~~~l~~~---~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~ 88 (219)
T PF07569_consen 13 SPVSFLECN---GSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGD 88 (219)
T ss_pred CceEEEEeC---CCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCC
Confidence 445555544 788999999999999999887654332 1 2345678888888888776654 467
Q ss_pred EEEeec
Q psy3639 107 ARIFNT 112 (113)
Q Consensus 107 i~~~~~ 112 (113)
.+.|+.
T Consensus 89 ~y~y~~ 94 (219)
T PF07569_consen 89 SYSYSP 94 (219)
T ss_pred EEEecc
Confidence 777764
No 359
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.96 E-value=0.042 Score=34.99 Aligned_cols=106 Identities=16% Similarity=0.186 Sum_probs=72.0
Q ss_pred ceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC---CCcEEEEeCCccccceee
Q psy3639 4 PRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF---DKTLKLWASAKEECIQTY 79 (113)
Q Consensus 4 ~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~v~~wd~~~~~~~~~~ 79 (113)
..+++.+. .++....+..|.+.|..+....+....-. ....+++. +.+..++.+.. ++++.+.|..+.+.....
T Consensus 79 i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~-~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~ 156 (381)
T COG3391 79 VAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVD-PDGKYVYVANAGNGNNTVSVIDAATNKVTATI 156 (381)
T ss_pred eeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEEC-CCCCEEEEEecccCCceEEEEeCCCCeEEEEE
Confidence 35566666 44445456788999977766665554222 45788888 55555544444 688999998888777765
Q ss_pred cccccceEEEEEccCCCEEEEee-cCCcEEEeec
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCS-MDHTARIFNT 112 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~ 112 (113)
.....+ ..++++|+|..+.+.. .++.+.+.|.
T Consensus 157 ~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~ 189 (381)
T COG3391 157 PVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDT 189 (381)
T ss_pred ecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeC
Confidence 433344 7899999999776665 6788888774
No 360
>KOG2079|consensus
Probab=96.93 E-value=0.0085 Score=42.32 Aligned_cols=65 Identities=18% Similarity=0.276 Sum_probs=50.2
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEE---EcCCCCCEEEEEeCCCcEEEEe
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVA---FSEPYGDKILTGSFDKTLKLWA 69 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~~~~v~~wd 69 (113)
..++++.+|.+++.|-.+|.|.+||+..++.++.+..+..+...+- +. ..+..+.++...|. +|.
T Consensus 134 tsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t-~~nS~llt~D~~Gs--f~~ 201 (1206)
T KOG2079|consen 134 TSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRT-SQNSKLLTSDTGGS--FWK 201 (1206)
T ss_pred eeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEe-CCCcEEEEccCCCc--eEE
Confidence 4678899999999999999999999999999998887776655443 33 44456777777775 454
No 361
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.79 E-value=0.01 Score=25.47 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=26.3
Q ss_pred eEEEEEEcCCCC--CEEEEEeCCCcEEEEeCCcc
Q psy3639 42 VVYAVAFSEPYG--DKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 42 ~v~~~~~~~~~~--~~~~~~~~~~~v~~wd~~~~ 73 (113)
.+.+++|+|..+ .+++..-..+.+.++|+++.
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 478899996666 68888888899999999863
No 362
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.77 E-value=0.036 Score=35.74 Aligned_cols=78 Identities=10% Similarity=0.130 Sum_probs=51.8
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCe-EEEEEEcCCCC-----------------CEEEEEeCCCc
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNV-VYAVAFSEPYG-----------------DKILTGSFDKT 64 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~-----------------~~~~~~~~~~~ 64 (113)
.++++|++++.++...-|.|.++|+.++..++.+++..+. +.-+....... -+++-.-..|.
T Consensus 312 ~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprRg~ 391 (415)
T PF14655_consen 312 SICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRRGI 391 (415)
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEeccCCe
Confidence 3578999999999888899999999998888877765432 22222111111 12334455678
Q ss_pred EEEEeCCccccceeec
Q psy3639 65 LKLWASAKEECIQTYR 80 (113)
Q Consensus 65 v~~wd~~~~~~~~~~~ 80 (113)
+.+|.++++..+..+.
T Consensus 392 lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 392 LEVWSMRQGPRVAAFN 407 (415)
T ss_pred EEEEecCCCCEEEEEE
Confidence 8888888877666554
No 363
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.53 E-value=0.074 Score=31.97 Aligned_cols=107 Identities=8% Similarity=0.121 Sum_probs=65.5
Q ss_pred ceEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCC-CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc------c
Q psy3639 4 PRVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGH-QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE------C 75 (113)
Q Consensus 4 ~~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~------~ 75 (113)
..++|+.+ ++++..+.+.|..++.. |+.+..+.-. ..-.-.+++. .++.++++...++.+.++++.... .
T Consensus 27 LTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~-g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~ 104 (248)
T PF06977_consen 27 LTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYL-GNGRYVLSEERDQRLYIFTIDDDTTSLDRAD 104 (248)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE--STTEEEEEETTTTEEEEEEE----TT--EEE
T ss_pred cEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEE-CCCEEEEEEcCCCcEEEEEEeccccccchhh
Confidence 46777654 77778888888888864 7777766432 2446778877 666666655558888888773321 1
Q ss_pred ceeec-----ccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 IQTYR-----GHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 ~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...+. ..+..+-.++|+|.++.|+++-+.....++.+
T Consensus 105 ~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~ 146 (248)
T PF06977_consen 105 VQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEV 146 (248)
T ss_dssp EEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred ceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEE
Confidence 11111 23456889999998888888877777666653
No 364
>KOG3630|consensus
Probab=96.50 E-value=0.013 Score=41.88 Aligned_cols=96 Identities=10% Similarity=0.056 Sum_probs=63.9
Q ss_pred eeecCCeEEEeeCCCCeeeE-----------EeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceeeccc
Q psy3639 15 TGSYDRTCKLWDIKSGHEIC-----------TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTYRGH 82 (113)
Q Consensus 15 ~~~~d~~v~i~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~~~~ 82 (113)
..+.+..|..||+++..... +.........++.|+|.-....+....|+.|++..+... +.+.++. .
T Consensus 119 ~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~ 197 (1405)
T KOG3630|consen 119 STSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-V 197 (1405)
T ss_pred EecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-c
Confidence 34444567889986543211 111223445788899766667777888899988766443 2233333 3
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.....+++|+|.|..++.|...|++..|-
T Consensus 198 t~~~Tav~WSprGKQl~iG~nnGt~vQy~ 226 (1405)
T KOG3630|consen 198 TNSQTAVLWSPRGKQLFIGRNNGTEVQYE 226 (1405)
T ss_pred ccceeeEEeccccceeeEecCCCeEEEee
Confidence 45678999999999999999999987763
No 365
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.48 E-value=0.12 Score=33.78 Aligned_cols=56 Identities=18% Similarity=0.094 Sum_probs=37.0
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWAS 70 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~ 70 (113)
|.+++..+.+ .|.+||..+++.+..+... +|..+.|+ +++..++..+.+ .+.+.+.
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws-~~g~~val~t~~-~i~il~~ 172 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWS-DDGELVALVTKD-SIYILKY 172 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE--TTSSEEEEE-S--SEEEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEE-CCCCEEEEEeCC-eEEEEEe
Confidence 6667766654 7999999999999888733 48999999 778888877765 5666654
No 366
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.45 E-value=0.11 Score=33.14 Aligned_cols=107 Identities=17% Similarity=0.225 Sum_probs=70.7
Q ss_pred ceEcCCCCEEEeeec---CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE-EEeCCCcEEEEeCCccccce-e
Q psy3639 4 PRVTSSPQRCLTGSY---DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL-TGSFDKTLKLWASAKEECIQ-T 78 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~---d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~v~~wd~~~~~~~~-~ 78 (113)
.+++++++.+..+.. ++.+.+.|..+.+.......-..+ ..+++. +.+..++ +-..++.+.+.|.......+ .
T Consensus 121 ~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~-p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~ 198 (381)
T COG3391 121 LAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVD-PDGNKVYVTNSDDNTVSVIDTSGNSVVRGS 198 (381)
T ss_pred EEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEEC-CCCCeEEEEecCCCeEEEEeCCCcceeccc
Confidence 467888876665544 688889998888887775544445 889999 6676544 44478899999976654432 1
Q ss_pred ---ecccccceEEEEEccCCCEEEEeecC---CcEEEeec
Q psy3639 79 ---YRGHSAEVVGVTFSPDQSTFCSCSMD---HTARIFNT 112 (113)
Q Consensus 79 ---~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~ 112 (113)
.......-..+.++|+|..+.+.... +.+...|.
T Consensus 199 ~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~ 238 (381)
T COG3391 199 VGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDT 238 (381)
T ss_pred cccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeC
Confidence 11122334678899999977665544 36666554
No 367
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.42 E-value=0.048 Score=34.17 Aligned_cols=61 Identities=15% Similarity=0.200 Sum_probs=42.2
Q ss_pred eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEe-CCCcEEEEeCCccccceeeccc
Q psy3639 21 TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS-FDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 21 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
.|-++|+.+++.+..+. -..++.++..+.....+|++.+ .++.+.+||..+++.+.++...
T Consensus 270 eVWv~D~~t~krv~Ri~-l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIP-LEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp EEEEEETTTTEEEEEEE-EEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred EEEEEECCCCeEEEEEe-CCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence 46677889999988887 3456778888854455666554 5789999999999988887744
No 368
>KOG2114|consensus
Probab=96.24 E-value=0.24 Score=34.75 Aligned_cols=108 Identities=8% Similarity=0.142 Sum_probs=67.8
Q ss_pred CcceEcCCCCEEEeeecCCeEEEeeCC----CCeeeEEeeCCCCeEEEEEEcCCCCCE-EEEEeCCCcEEEEeCCccc-c
Q psy3639 2 GVPRVTSSPQRCLTGSYDRTCKLWDIK----SGHEICTYRGHQNVVYAVAFSEPYGDK-ILTGSFDKTLKLWASAKEE-C 75 (113)
Q Consensus 2 ~~~~~~~~~~~~~~~~~d~~v~i~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~v~~wd~~~~~-~ 75 (113)
++.+++.+-+.+++|-.+|.|..+.-+ .+....-......+|+.+.+. .++.. +..+.. ..|.+|.+.... .
T Consensus 129 s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~-~d~~s~lFv~Tt-~~V~~y~l~gr~p~ 206 (933)
T KOG2114|consen 129 SSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALR-SDGKSVLFVATT-EQVMLYSLSGRTPS 206 (933)
T ss_pred eEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEe-cCCceeEEEEec-ceeEEEEecCCCcc
Confidence 355677778889999999999887532 112222222356789999998 55554 233332 468889886333 2
Q ss_pred ceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+..+..++..+.+..+++....+++++ +..+.+|+.
T Consensus 207 ~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~s 242 (933)
T KOG2114|consen 207 LKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDS 242 (933)
T ss_pred eeeeccCCccceeeecCCCCccEEEec-CceEEEEcC
Confidence 444666777888888887555344443 456666654
No 369
>KOG2444|consensus
Probab=96.23 E-value=0.02 Score=33.73 Aligned_cols=62 Identities=18% Similarity=0.198 Sum_probs=46.9
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCC-CeEEEEEEcCCCCCEEEEE--eCCCcEEEEeCCc
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQ-NVVYAVAFSEPYGDKILTG--SFDKTLKLWASAK 72 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~--~~~~~v~~wd~~~ 72 (113)
+.+..+++.++.|+.|+..-++.+...-.|. .+......+ ..+..++.. +.+..++.|++..
T Consensus 114 ~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv-~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 114 SSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVV-GSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred cceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEe-cCCceEEeeccccchhhhhcchhh
Confidence 4478889999999999999888887777777 566666665 556666666 7777888887644
No 370
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.14 E-value=0.16 Score=31.62 Aligned_cols=99 Identities=9% Similarity=0.145 Sum_probs=60.2
Q ss_pred cceEcCCCCEEEeeec-CCeEEEeeCCC--C----ee-eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCC-cEEEEeCCcc
Q psy3639 3 VPRVTSSPQRCLTGSY-DRTCKLWDIKS--G----HE-ICTYRGHQNVVYAVAFSEPYGDKILTGSFDK-TLKLWASAKE 73 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~-d~~v~i~~~~~--~----~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~v~~wd~~~~ 73 (113)
-++|+|+++.++.+.. .+.+.-|+... + +. ...+.......-.++.. .++.+.+++..+| .|..|+.. +
T Consensus 167 Gla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vD-adG~lw~~a~~~g~~v~~~~pd-G 244 (307)
T COG3386 167 GLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVD-ADGNLWVAAVWGGGRVVRFNPD-G 244 (307)
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEe-CCCCEEEecccCCceEEEECCC-C
Confidence 4689999986665544 46777776652 1 11 11112223334455555 6677776555554 89999987 8
Q ss_pred ccceeecccccceEEEEEc-cCCCEEEEeec
Q psy3639 74 ECIQTYRGHSAEVVGVTFS-PDQSTFCSCSM 103 (113)
Q Consensus 74 ~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~ 103 (113)
+.+..+......+.+++|- |+.+.|.+.+.
T Consensus 245 ~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~ 275 (307)
T COG3386 245 KLLGEIKLPVKRPTNPAFGGPDLNTLYITSA 275 (307)
T ss_pred cEEEEEECCCCCCccceEeCCCcCEEEEEec
Confidence 8888777665666777773 45566554443
No 371
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.01 E-value=0.15 Score=31.66 Aligned_cols=98 Identities=7% Similarity=0.059 Sum_probs=57.1
Q ss_pred CCEEEeeec----------CCeEEEeeCCCC----eeeEEe--eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 10 PQRCLTGSY----------DRTCKLWDIKSG----HEICTY--RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 10 ~~~~~~~~~----------d~~v~i~~~~~~----~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
.+++++|+. .|.+.++++... ..+..+ ....++|.+++-. ++. ++.+. ++.+.+|++...
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~-lv~~~-g~~l~v~~l~~~ 117 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGR-LVVAV-GNKLYVYDLDNS 117 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTE-EEEEE-TTEEEEEEEETT
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCE-EEEee-cCEEEEEEccCc
Confidence 356666644 288999998874 122222 2357889998865 234 44443 378999998777
Q ss_pred ccceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 74 ECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 74 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
+.+........++...+....++++++++.-..+.++.
T Consensus 118 ~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~ 155 (321)
T PF03178_consen 118 KTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLR 155 (321)
T ss_dssp SSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEE
T ss_pred ccchhhheecceEEEEEEeccccEEEEEEcccCEEEEE
Confidence 62222222222223334444577899998888777763
No 372
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.00 E-value=0.23 Score=32.27 Aligned_cols=90 Identities=10% Similarity=0.089 Sum_probs=59.5
Q ss_pred cceEcCCCCEEEeeecCCeEEE---eeCC-CC----eee----EEeeCC-CCeEEEEEEcCC----------CCCEEEEE
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKL---WDIK-SG----HEI----CTYRGH-QNVVYAVAFSEP----------YGDKILTG 59 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i---~~~~-~~----~~~----~~~~~~-~~~v~~~~~~~~----------~~~~~~~~ 59 (113)
...++|+++.++.+..+..+.+ |+.. .+ ... ..+... ...|+++.+-|- +...++.|
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG 85 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG 85 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence 4578999999999988777655 5331 11 111 112211 156777776542 34678999
Q ss_pred eCCCcEEEEeCCccccceeecccccceEEEEEcc
Q psy3639 60 SFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSP 93 (113)
Q Consensus 60 ~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~ 93 (113)
..+|.+++|.. ++..+....-|..+|..+....
T Consensus 86 ~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~ 118 (415)
T PF14655_consen 86 TSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRS 118 (415)
T ss_pred ecccEEEEEec-cchHHHHHhcCccceEEEEecc
Confidence 99999999975 6666666666788888887743
No 373
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=95.91 E-value=0.32 Score=33.27 Aligned_cols=76 Identities=11% Similarity=0.184 Sum_probs=49.9
Q ss_pred EeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec-ccccceEEEEEc--cCCCEEEEeecCCcEEEee
Q psy3639 35 TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR-GHSAEVVGVTFS--PDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 35 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~~i~~~~ 111 (113)
++.........+.-+ ..+...+.-.....+.+||.+.+....... ...+.|.+++|. |+|+.+++.+..+.|.++.
T Consensus 24 ~~~T~i~~~~li~gs-s~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 24 TFETGISNPSLISGS-SIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred EEecCCCCcceEeec-ccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 333333445555555 344444444445579999998886333322 246789999995 5889999999999888874
No 374
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=95.89 E-value=0.28 Score=32.45 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=47.1
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCC------eEE--EEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQN------VVY--AVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~------~v~--~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
+..++.++.++.+.-.|..+++.+..++.... .+. .+... ++..++.++.++.+.-+|.++++.+.....
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~--~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~ 138 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW--DPRKVFFGTFDGRLVALDAETGKQVWKFGN 138 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc--cCCeEEEecCCCeEEEEECCCCCEeeeecC
Confidence 34566677788999999999988776653322 000 01111 125777788899999999999988877653
No 375
>PRK13616 lipoprotein LpqB; Provisional
Probab=95.86 E-value=0.33 Score=33.02 Aligned_cols=105 Identities=7% Similarity=0.022 Sum_probs=54.7
Q ss_pred cceEcCCCCEEEeeecC-CeEEEeeCCCCeeeEEe--e------CCCCeEEEEEEcCCCCCEEEEEeCCCcEEE---EeC
Q psy3639 3 VPRVTSSPQRCLTGSYD-RTCKLWDIKSGHEICTY--R------GHQNVVYAVAFSEPYGDKILTGSFDKTLKL---WAS 70 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d-~~v~i~~~~~~~~~~~~--~------~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~---wd~ 70 (113)
...|+|++..+++.... ..+++.+......+..+ . .....|..+.|+ ++|..++... ++.|.+ -..
T Consensus 401 ~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wS-pDG~RiA~i~-~g~v~Va~Vvr~ 478 (591)
T PRK13616 401 RPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLS-RDGVRAAMII-GGKVYLAVVEQT 478 (591)
T ss_pred CceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEEC-CCCCEEEEEE-CCEEEEEEEEeC
Confidence 45788988877665432 22333322111111111 1 234579999999 7788766554 466665 232
Q ss_pred Cccc-cc---eeecc-cccceEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 71 AKEE-CI---QTYRG-HSAEVVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 71 ~~~~-~~---~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
..+. .+ ..+.. ....+.++.|..++..+ ++..++.-.+|
T Consensus 479 ~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~ 522 (591)
T PRK13616 479 EDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVW 522 (591)
T ss_pred CCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceE
Confidence 3333 11 11221 22335778999988854 55444443444
No 376
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=95.80 E-value=0.33 Score=32.54 Aligned_cols=59 Identities=7% Similarity=0.120 Sum_probs=44.6
Q ss_pred CCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 53 GDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 53 ~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..+++.++..|.|++||.-.......+.+....|..+..+.+|.++++.+.. .+.+-|+
T Consensus 573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~ 631 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV 631 (776)
T ss_pred CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence 3478889999999999976655566677777889999999999988776643 4444443
No 377
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.79 E-value=0.32 Score=33.88 Aligned_cols=70 Identities=11% Similarity=0.020 Sum_probs=46.3
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCC---------Cee---eEEe--------eCCCCeEEEEEEcCC--CCCEEEEEeC
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKS---------GHE---ICTY--------RGHQNVVYAVAFSEP--YGDKILTGSF 61 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~---------~~~---~~~~--------~~~~~~v~~~~~~~~--~~~~~~~~~~ 61 (113)
+.++++|++++..|..+.+.+.=.+. ++. .+++ ......|..+.|+|. .+..++.-..
T Consensus 90 i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~vLts 169 (717)
T PF10168_consen 90 ISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLVVLTS 169 (717)
T ss_pred EEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEEEEec
Confidence 45789999999888766443332211 111 1111 123457899999964 3678999999
Q ss_pred CCcEEEEeCCcc
Q psy3639 62 DKTLKLWASAKE 73 (113)
Q Consensus 62 ~~~v~~wd~~~~ 73 (113)
|+.+++||+...
T Consensus 170 dn~lR~y~~~~~ 181 (717)
T PF10168_consen 170 DNTLRLYDISDP 181 (717)
T ss_pred CCEEEEEecCCC
Confidence 999999998643
No 378
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.75 E-value=0.29 Score=31.58 Aligned_cols=107 Identities=14% Similarity=0.060 Sum_probs=66.1
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCe-------------------------------------------eeEEeeCCC
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGH-------------------------------------------EICTYRGHQ 40 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~-------------------------------------------~~~~~~~~~ 40 (113)
+.+++..--++++...|.|-+|.....+ +...++...
T Consensus 7 vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~~~~~ 86 (395)
T PF08596_consen 7 VSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLLDAKQ 86 (395)
T ss_dssp EEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE---S
T ss_pred EEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhheeccC
Confidence 4456666678888888988887542110 111222346
Q ss_pred CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec--c------cccceEEEEEcc-----CC---CEEEEeecC
Q psy3639 41 NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR--G------HSAEVVGVTFSP-----DQ---STFCSCSMD 104 (113)
Q Consensus 41 ~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~--~------~~~~v~~~~~~~-----~~---~~~~~~~~~ 104 (113)
++|++++.+ +--+++.|.++|.+.+.|++....++.-. . ....+.++.|+. |+ -.+++|+..
T Consensus 87 g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~ 164 (395)
T PF08596_consen 87 GPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNS 164 (395)
T ss_dssp -SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETT
T ss_pred CcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCC
Confidence 788899886 34688999999999999998765544321 1 234566777762 22 357888999
Q ss_pred CcEEEeec
Q psy3639 105 HTARIFNT 112 (113)
Q Consensus 105 ~~i~~~~~ 112 (113)
|.+.+|.+
T Consensus 165 G~v~~fkI 172 (395)
T PF08596_consen 165 GNVLTFKI 172 (395)
T ss_dssp SEEEEEEE
T ss_pred CCEEEEEE
Confidence 99988864
No 379
>KOG4499|consensus
Probab=95.74 E-value=0.21 Score=29.99 Aligned_cols=88 Identities=10% Similarity=0.104 Sum_probs=58.1
Q ss_pred ceEcCCCC-EEEeeecCCeEEEee--CCCCee-----eEEeeCC---CC-eEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q psy3639 4 PRVTSSPQ-RCLTGSYDRTCKLWD--IKSGHE-----ICTYRGH---QN-VVYAVAFSEPYGDKILTGSFDKTLKLWASA 71 (113)
Q Consensus 4 ~~~~~~~~-~~~~~~~d~~v~i~~--~~~~~~-----~~~~~~~---~~-~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~ 71 (113)
.+|+.+.+ +..+-+.+-+|.-|| ..+|.. +..++.. .. .--.+++. ..|.++++.-..++|...|+.
T Consensus 163 l~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID-~eG~L~Va~~ng~~V~~~dp~ 241 (310)
T KOG4499|consen 163 LAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTID-TEGNLYVATFNGGTVQKVDPT 241 (310)
T ss_pred ccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEc-cCCcEEEEEecCcEEEEECCC
Confidence 34555554 455666677776666 555532 2222210 11 11233344 567888888888899999999
Q ss_pred ccccceeecccccceEEEEEc
Q psy3639 72 KEECIQTYRGHSAEVVGVTFS 92 (113)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~~~~ 92 (113)
+++.+..++-....+.+.+|-
T Consensus 242 tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 242 TGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred CCcEEEEEEcCCCceEEEEec
Confidence 999999998888899999985
No 380
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=95.72 E-value=0.31 Score=31.60 Aligned_cols=65 Identities=6% Similarity=0.111 Sum_probs=44.6
Q ss_pred ceEcCCCCEEEeeecC----------C-eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q psy3639 4 PRVTSSPQRCLTGSYD----------R-TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA 71 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d----------~-~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~ 71 (113)
++.+|.|-.+|...++ . .|.+|+.. |+.+..+.-..+.+.++.|. . ...++....||.++++|+.
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s-G~ll~~i~w~~~~iv~~~wt-~-~e~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS-GKLLSSIPWDSGRIVGMGWT-D-DEELVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEECCC-CCEeEEEEECCCCEEEEEEC-C-CCeEEEEEcCCEEEEEeCC
Confidence 3556666655555433 1 48888865 66666554333789999998 5 4566677799999999985
No 381
>KOG1920|consensus
Probab=95.67 E-value=0.25 Score=35.92 Aligned_cols=67 Identities=13% Similarity=0.111 Sum_probs=52.4
Q ss_pred CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEE
Q psy3639 41 NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARI 109 (113)
Q Consensus 41 ~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 109 (113)
..|.++.+. .+++.++.+...|.|.+-|..+... .....-...|.+++|+||...++..+..+++.+
T Consensus 69 ~~i~s~~fl-~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~ 135 (1265)
T KOG1920|consen 69 DEIVSVQFL-ADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLF 135 (1265)
T ss_pred cceEEEEEe-cccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEE
Confidence 478888888 7788888889999999988776642 222224568899999999999999888877765
No 382
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.58 E-value=0.24 Score=33.14 Aligned_cols=70 Identities=23% Similarity=0.265 Sum_probs=41.6
Q ss_pred CCCEEEeeecCCeEEEeeCCC----CeeeEEe--e---------C-----------CCCeEEEEEEcC---CCCCEEEEE
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKS----GHEICTY--R---------G-----------HQNVVYAVAFSE---PYGDKILTG 59 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~----~~~~~~~--~---------~-----------~~~~v~~~~~~~---~~~~~~~~~ 59 (113)
+...++.+..||.+....... +...... . + .......+++.+ ....++++.
T Consensus 157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl 236 (547)
T PF11715_consen 157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL 236 (547)
T ss_dssp SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence 666777778888887766543 2111111 0 0 112345555552 156788999
Q ss_pred eCCCcEEEEeCCcccccee
Q psy3639 60 SFDKTLKLWASAKEECIQT 78 (113)
Q Consensus 60 ~~~~~v~~wd~~~~~~~~~ 78 (113)
+.|+.+|+||+.+++++.+
T Consensus 237 ~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 237 SRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp ETTSEEEEEETTTTCEEEE
T ss_pred eCCCeEEEEECCCCeEEEE
Confidence 9999999999999887544
No 383
>KOG1897|consensus
Probab=95.55 E-value=0.57 Score=33.62 Aligned_cols=101 Identities=9% Similarity=0.168 Sum_probs=64.0
Q ss_pred EcCC-CCEEEeeec----------CCeEEEeeCCCCeeeEEeeCC--CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc
Q psy3639 6 VTSS-PQRCLTGSY----------DRTCKLWDIKSGHEICTYRGH--QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK 72 (113)
Q Consensus 6 ~~~~-~~~~~~~~~----------d~~v~i~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~ 72 (113)
+..+ +.++++|.. .|.+.+|.+.....+.....+ .+.+.++.. -++++++. -+..|++|+..+
T Consensus 782 ~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~--fngkllA~--In~~vrLye~t~ 857 (1096)
T KOG1897|consen 782 FTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE--FNGKLLAG--INQSVRLYEWTT 857 (1096)
T ss_pred ecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh--hCCeEEEe--cCcEEEEEEccc
Confidence 3344 456666643 466777776654444333222 233444432 34666654 446899999988
Q ss_pred cccceeecccccceEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 73 EECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 73 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
.+.++....+..++..+.....|+.+++|.-=+.+.+.
T Consensus 858 ~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll 895 (1096)
T KOG1897|consen 858 ERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLL 895 (1096)
T ss_pred cceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEE
Confidence 87777666677778888888889999998876666554
No 384
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=95.46 E-value=0.3 Score=29.73 Aligned_cols=100 Identities=9% Similarity=-0.018 Sum_probs=61.5
Q ss_pred CCCCEEEeeecCC--eEEEeeCCCCeeeEEeeC-CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccccc
Q psy3639 8 SSPQRCLTGSYDR--TCKLWDIKSGHEICTYRG-HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSA 84 (113)
Q Consensus 8 ~~~~~~~~~~~d~--~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~ 84 (113)
.++.++-+.+.-| .++.+|+.+++......- ..-.--.+... ++..+.-.-.++...+||..+.+.+.++.-. .
T Consensus 54 ~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~-~ 130 (264)
T PF05096_consen 54 DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKEGTGFVYDPNTLKKIGTFPYP-G 130 (264)
T ss_dssp ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEE-S-S
T ss_pred CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEecCCeEEEEccccceEEEEEecC-C
Confidence 4455555555544 588899999887655432 12223344443 2344445556789999999988877777643 3
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
.=+.++ .++..|+.+.....++++|.
T Consensus 131 EGWGLt--~dg~~Li~SDGS~~L~~~dP 156 (264)
T PF05096_consen 131 EGWGLT--SDGKRLIMSDGSSRLYFLDP 156 (264)
T ss_dssp S--EEE--ECSSCEEEE-SSSEEEEE-T
T ss_pred cceEEE--cCCCEEEEECCccceEEECC
Confidence 346666 47888888888888988874
No 385
>KOG1916|consensus
Probab=95.42 E-value=0.026 Score=39.67 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=55.2
Q ss_pred CeEEEeeCC--CCee-----eEEeeCCCCeEEEEEEcC--CCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEE-
Q psy3639 20 RTCKLWDIK--SGHE-----ICTYRGHQNVVYAVAFSE--PYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGV- 89 (113)
Q Consensus 20 ~~v~i~~~~--~~~~-----~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~- 89 (113)
|...+|+++ .|+. +.........+.-+.|+| ++.-++..+..++.+++........ ..+.+|...+..+
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a 231 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMA 231 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHH
Confidence 556788764 2332 222333444556666765 3345667777888888876554321 2222233322222
Q ss_pred ----------EEccCCCEEEEeecCCcEEEeec
Q psy3639 90 ----------TFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 90 ----------~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..+|||..++.++.||.+++|.+
T Consensus 232 ~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 232 FFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred HHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 26899999999999999988853
No 386
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=95.25 E-value=0.52 Score=31.25 Aligned_cols=67 Identities=13% Similarity=0.320 Sum_probs=43.9
Q ss_pred CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCe-----E-EEEEEcCCCCCEEEEEe---------CCCcEEEEeCCcccc
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNV-----V-YAVAFSEPYGDKILTGS---------FDKTLKLWASAKEEC 75 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~-----v-~~~~~~~~~~~~~~~~~---------~~~~v~~wd~~~~~~ 75 (113)
..++.++.++.|+-+|.++++.+..+...... + ....+. +..++.++ .++.+..+|..+++.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~---~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~ 187 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV---KKLVIIGSSGAEFFACGVRGALRAYDVETGKL 187 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEE---CCEEEEeccccccccCCCCcEEEEEECCCCce
Confidence 67777888999999999999988777543221 1 111122 13344443 357788889999887
Q ss_pred ceeec
Q psy3639 76 IQTYR 80 (113)
Q Consensus 76 ~~~~~ 80 (113)
+..+.
T Consensus 188 ~W~~~ 192 (488)
T cd00216 188 LWRFY 192 (488)
T ss_pred eeEee
Confidence 77664
No 387
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.21 E-value=0.68 Score=32.37 Aligned_cols=70 Identities=19% Similarity=0.228 Sum_probs=46.9
Q ss_pred eEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc---------ccc---ceee--------cccccceEEEEEccC---CCEE
Q psy3639 42 VVYAVAFSEPYGDKILTGSFDKTLKLWASAK---------EEC---IQTY--------RGHSAEVVGVTFSPD---QSTF 98 (113)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~---------~~~---~~~~--------~~~~~~v~~~~~~~~---~~~~ 98 (113)
.|..+.++ +.|.+++-.+..|...+.=.+. ++. .+++ ......|..+.|+|. +.+|
T Consensus 86 ~v~~i~~n-~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 86 EVHQISLN-PTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eEEEEEEC-CCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 46788888 7788888777766443332211 111 1111 123457889999995 5789
Q ss_pred EEeecCCcEEEeec
Q psy3639 99 CSCSMDHTARIFNT 112 (113)
Q Consensus 99 ~~~~~~~~i~~~~~ 112 (113)
++-..|+.+++||+
T Consensus 165 ~vLtsdn~lR~y~~ 178 (717)
T PF10168_consen 165 VVLTSDNTLRLYDI 178 (717)
T ss_pred EEEecCCEEEEEec
Confidence 99999999999997
No 388
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.21 E-value=0.47 Score=30.51 Aligned_cols=94 Identities=17% Similarity=0.084 Sum_probs=44.6
Q ss_pred ceEcCCCCEEEeeec-C--CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec
Q psy3639 4 PRVTSSPQRCLTGSY-D--RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~-d--~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
.+|..+|+.++-++. + ..+++.|+.+++..+.-.+.........++ +..+.++....+..++--|+.+.+....+.
T Consensus 41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s-~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~ 119 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLS-PDDRALYYVKNGRSLRRVDLDTLEERVVYE 119 (386)
T ss_dssp --B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE--TTSSEEEEEETTTEEEEEETTT--EEEEEE
T ss_pred CCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEe-cCCCeEEEEECCCeEEEEECCcCcEEEEEE
Confidence 367888876555444 4 456667888888776555432323345556 445665545455678888888876544454
Q ss_pred ccccceEEEEEc--cCCCEE
Q psy3639 81 GHSAEVVGVTFS--PDQSTF 98 (113)
Q Consensus 81 ~~~~~v~~~~~~--~~~~~~ 98 (113)
.....+-...|. .++..+
T Consensus 120 ~p~~~~g~gt~v~n~d~t~~ 139 (386)
T PF14583_consen 120 VPDDWKGYGTWVANSDCTKL 139 (386)
T ss_dssp --TTEEEEEEEEE-TTSSEE
T ss_pred CCcccccccceeeCCCccEE
Confidence 444444334553 355544
No 389
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=95.14 E-value=0.31 Score=31.48 Aligned_cols=92 Identities=7% Similarity=0.024 Sum_probs=48.7
Q ss_pred EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEc----CCCCCEEEEEeCCCcEEEEeCCccccceeeccc----c
Q psy3639 12 RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFS----EPYGDKILTGSFDKTLKLWASAKEECIQTYRGH----S 83 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~----~ 83 (113)
++++++ +..++++...+.+..+...........+.+- ...+..++.-..+|.++++.+...+.+...+.. .
T Consensus 228 ~vVvvS-e~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~ 306 (395)
T PF08596_consen 228 YVVVVS-ESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDS 306 (395)
T ss_dssp EEEEE--SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---H
T ss_pred EEEEEc-ccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccc
Confidence 344444 5679999988777655444222222333332 124667888899999999999887766655432 2
Q ss_pred cceEEEEEccCCCEEEEeecC
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMD 104 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~ 104 (113)
..+....++++|+.+...+..
T Consensus 307 ~~~~~ssis~~Gdi~~~~gps 327 (395)
T PF08596_consen 307 RRLSSSSISRNGDIFYWTGPS 327 (395)
T ss_dssp HHHTT-EE-TTS-EEEE-SSS
T ss_pred ccccccEECCCCCEEEEeCcc
Confidence 234456778889877665543
No 390
>KOG2395|consensus
Probab=95.03 E-value=0.12 Score=34.34 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=45.0
Q ss_pred eEcCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q psy3639 5 RVTSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWAS 70 (113)
Q Consensus 5 ~~~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~ 70 (113)
|+...+. ++++|+.+|.|++||-.-......+.+...+|..+..+ .+|.+++..+. .++.+-+.
T Consensus 435 c~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvt-adGKwil~Tc~-tyLlLi~t 499 (644)
T KOG2395|consen 435 CFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVT-ADGKWILATCK-TYLLLIDT 499 (644)
T ss_pred eeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEee-ccCcEEEEecc-cEEEEEEE
Confidence 3444443 78899999999999973233344567788899999998 88887665544 46666653
No 391
>KOG4460|consensus
Probab=95.01 E-value=0.46 Score=31.93 Aligned_cols=72 Identities=6% Similarity=0.059 Sum_probs=47.7
Q ss_pred eEcCCCCEEEeeecCCeEEEeeC---------CCCeeeEEee-----------CCCCeEEEEEEcCCC--CCEEEEEeCC
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDI---------KSGHEICTYR-----------GHQNVVYAVAFSEPY--GDKILTGSFD 62 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~---------~~~~~~~~~~-----------~~~~~v~~~~~~~~~--~~~~~~~~~~ 62 (113)
-.++.|..++-++.+|.+.++-. +.++..-..+ ...-.+...+|+|.. ...+..-..|
T Consensus 110 l~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sd 189 (741)
T KOG4460|consen 110 LLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSD 189 (741)
T ss_pred EecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecC
Confidence 46788999999888887665542 2232221111 111235678899765 6788888999
Q ss_pred CcEEEEeCCccccc
Q psy3639 63 KTLKLWASAKEECI 76 (113)
Q Consensus 63 ~~v~~wd~~~~~~~ 76 (113)
+.+++||......+
T Consensus 190 nviRiy~lS~~tel 203 (741)
T KOG4460|consen 190 NVIRIYSLSEPTEL 203 (741)
T ss_pred cEEEEEecCCcchh
Confidence 99999998765444
No 392
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=94.88 E-value=0.65 Score=30.44 Aligned_cols=95 Identities=11% Similarity=0.154 Sum_probs=49.3
Q ss_pred cCCeEEEeeCCCCeeeEEeeCCC--CeEEEEEEc--CCCCCEEEEEeCCCcEEEEeC-Cccc----cceeecc-------
Q psy3639 18 YDRTCKLWDIKSGHEICTYRGHQ--NVVYAVAFS--EPYGDKILTGSFDKTLKLWAS-AKEE----CIQTYRG------- 81 (113)
Q Consensus 18 ~d~~v~i~~~~~~~~~~~~~~~~--~~v~~~~~~--~~~~~~~~~~~~~~~v~~wd~-~~~~----~~~~~~~------- 81 (113)
....+.+||+.+.+.++++.--. .-...+.|. |.....++.+.....|..|-- ..++ .+-.+..
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~ 299 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI 299 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence 35679999999999999997433 234566664 233344555555555555532 2221 1111110
Q ss_pred ----------cccceEEEEEccCCCEEEEeec-CCcEEEeec
Q psy3639 82 ----------HSAEVVGVTFSPDQSTFCSCSM-DHTARIFNT 112 (113)
Q Consensus 82 ----------~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~ 112 (113)
-..-+..+..|.|.++|.+++. +|.++.||+
T Consensus 300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDI 341 (461)
T PF05694_consen 300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDI 341 (461)
T ss_dssp --GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-
T ss_pred ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEec
Confidence 1234688999999999876655 789999997
No 393
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=94.77 E-value=0.56 Score=29.19 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=48.7
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCCeeeEEe-eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe-CCccccc----eee
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSGHEICTY-RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA-SAKEECI----QTY 79 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd-~~~~~~~----~~~ 79 (113)
-++++++++++..-....-|+.-.. ..... ......+..+.|. +++.+.+.+ ..|.++.=+ ....+.- ...
T Consensus 152 r~~dG~~vavs~~G~~~~s~~~G~~-~w~~~~r~~~~riq~~gf~-~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~ 228 (302)
T PF14870_consen 152 RSSDGRYVAVSSRGNFYSSWDPGQT-TWQPHNRNSSRRIQSMGFS-PDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPI 228 (302)
T ss_dssp E-TTS-EEEEETTSSEEEEE-TT-S-S-EEEE--SSS-EEEEEE--TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TT
T ss_pred ECCCCcEEEEECcccEEEEecCCCc-cceEEccCccceehhceec-CCCCEEEEe-CCcEEEEccCCCCccccccccCCc
Confidence 4678888877765444445664321 12222 2246789999999 666665544 778888776 2222211 111
Q ss_pred cccccceEEEEEccCCCEEEEeecCCcE
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMDHTA 107 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i 107 (113)
....-.+..++|.+++...++++ .|.+
T Consensus 229 ~~~~~~~ld~a~~~~~~~wa~gg-~G~l 255 (302)
T PF14870_consen 229 KTNGYGILDLAYRPPNEIWAVGG-SGTL 255 (302)
T ss_dssp SS--S-EEEEEESSSS-EEEEES-TT-E
T ss_pred ccCceeeEEEEecCCCCEEEEeC-CccE
Confidence 11223478899998877666554 4444
No 394
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=94.60 E-value=0.58 Score=31.41 Aligned_cols=61 Identities=15% Similarity=0.276 Sum_probs=40.1
Q ss_pred CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc
Q psy3639 20 RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 82 (113)
Q Consensus 20 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~ 82 (113)
+.+.-+|+.+++............... +. ..+.+++.++.+|.++.+|.++++.+...+..
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~-t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g 501 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGV-LA-TAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG 501 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcc-eE-ECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence 456677888887766654222111111 11 23456777888999999999999988877643
No 395
>PRK10115 protease 2; Provisional
Probab=94.43 E-value=1.1 Score=31.16 Aligned_cols=105 Identities=3% Similarity=-0.038 Sum_probs=56.4
Q ss_pred ceEcCCCCEEEee-----ecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEE-EEEeCC-----CcEEEEeCCc
Q psy3639 4 PRVTSSPQRCLTG-----SYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKI-LTGSFD-----KTLKLWASAK 72 (113)
Q Consensus 4 ~~~~~~~~~~~~~-----~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-----~~v~~wd~~~ 72 (113)
..++|++++++.+ ++...+++.|+.+++.+...-.... ..+.|. +++..+ ++...+ ..+..+++.+
T Consensus 132 ~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~-~D~~~~~y~~~~~~~~~~~~v~~h~lgt 208 (686)
T PRK10115 132 MAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWA-NDSWTFYYVRKHPVTLLPYQVWRHTIGT 208 (686)
T ss_pred EEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEe-eCCCEEEEEEecCCCCCCCEEEEEECCC
Confidence 4678999987754 3334577888887763322211222 458898 556544 444432 2577777777
Q ss_pred c--ccceeecccccceE-EEEEccCCCEEEEeec---CCcEEEee
Q psy3639 73 E--ECIQTYRGHSAEVV-GVTFSPDQSTFCSCSM---DHTARIFN 111 (113)
Q Consensus 73 ~--~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~---~~~i~~~~ 111 (113)
+ +....+........ ....+.++++++..+. ++.+.+++
T Consensus 209 ~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~ 253 (686)
T PRK10115 209 PASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLD 253 (686)
T ss_pred ChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEE
Confidence 6 32233332222233 2333447777654433 34566665
No 396
>PHA02713 hypothetical protein; Provisional
Probab=93.98 E-value=0.91 Score=30.75 Aligned_cols=59 Identities=10% Similarity=0.127 Sum_probs=32.1
Q ss_pred CCCEEEEEeCC------CcEEEEeCCc-cc--cceeecccccceEEEEEccCCCEEEEeecCC--cEEEeec
Q psy3639 52 YGDKILTGSFD------KTLKLWASAK-EE--CIQTYRGHSAEVVGVTFSPDQSTFCSCSMDH--TARIFNT 112 (113)
Q Consensus 52 ~~~~~~~~~~~------~~v~~wd~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~~~~~ 112 (113)
++.+.+.|+.+ ..+..||+.+ .+ .+..+...........+ ++...++|+.++ .+..||.
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCc
Confidence 35666777654 2367788876 33 33333322222222222 677788888777 4544443
No 397
>KOG4499|consensus
Probab=93.94 E-value=0.81 Score=27.68 Aligned_cols=55 Identities=9% Similarity=0.047 Sum_probs=42.8
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEE
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTG 59 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 59 (113)
+++-.|+++++.-..++|...|..+|+.+.+++--+..+++.+|--++-..+++.
T Consensus 218 ~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT 272 (310)
T KOG4499|consen 218 TIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGKNLDILYVT 272 (310)
T ss_pred eEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCCCccEEEEE
Confidence 4455778777777788999999999999999988888899999974444444433
No 398
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.93 E-value=0.91 Score=28.25 Aligned_cols=98 Identities=11% Similarity=0.172 Sum_probs=61.9
Q ss_pred eEcCCCCEEEeeec-----CCeEEEeeCCCC-eeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCC----------------
Q psy3639 5 RVTSSPQRCLTGSY-----DRTCKLWDIKSG-HEICTYRGHQNVVYAVAFSEPYGDKILTGSFD---------------- 62 (113)
Q Consensus 5 ~~~~~~~~~~~~~~-----d~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---------------- 62 (113)
.|+++|.+|+..-. -|.|-+||.+.+ ..+.++..|.-.-..+.+. ++++.++..+..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm-~DGrtlvvanGGIethpdfgR~~lNlds 198 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLM-ADGRTLVVANGGIETHPDFGRTELNLDS 198 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEe-cCCcEEEEeCCceecccccCccccchhh
Confidence 47888887665322 367789998754 4567777787777888888 888888766541
Q ss_pred --CcEEEEeCCccccceee--c--ccccceEEEEEccCCCEEEEeec
Q psy3639 63 --KTLKLWASAKEECIQTY--R--GHSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 63 --~~v~~wd~~~~~~~~~~--~--~~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
-.+.+.|..+++.+.+. . .+.-.+.+++..++|..++.+..
T Consensus 199 MePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy 245 (366)
T COG3490 199 MEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQY 245 (366)
T ss_pred cCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEe
Confidence 11223333444433322 2 23346888999888886665544
No 399
>PHA02713 hypothetical protein; Provisional
Probab=93.88 E-value=1.3 Score=29.98 Aligned_cols=24 Identities=8% Similarity=0.099 Sum_probs=15.7
Q ss_pred cCCCCEEEeeecCC-----eEEEeeCCCC
Q psy3639 7 TSSPQRCLTGSYDR-----TCKLWDIKSG 30 (113)
Q Consensus 7 ~~~~~~~~~~~~d~-----~v~i~~~~~~ 30 (113)
..++++++.||.++ .+..||..+.
T Consensus 349 ~~~g~IYviGG~~~~~~~~sve~Ydp~~~ 377 (557)
T PHA02713 349 VIDDTIYAIGGQNGTNVERTIECYTMGDD 377 (557)
T ss_pred EECCEEEEECCcCCCCCCceEEEEECCCC
Confidence 34567778887653 3667887654
No 400
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=93.78 E-value=0.26 Score=33.01 Aligned_cols=29 Identities=24% Similarity=0.429 Sum_probs=24.8
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEee
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYR 37 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~ 37 (113)
+..++++.+.|+++|+||+.+++++.+..
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 56788899999999999999999866553
No 401
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.77 E-value=0.98 Score=28.08 Aligned_cols=109 Identities=11% Similarity=0.104 Sum_probs=68.5
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCC-CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc------
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGH-QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC------ 75 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~------ 75 (113)
...++|+.+.+.+-.....-.++=..+|..+.++.-. -.....+.+. .++.++++--.++.+.++.+.....
T Consensus 90 ~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyi-g~n~fvi~dER~~~l~~~~vd~~t~~~~~~~ 168 (316)
T COG3204 90 SLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYI-GGNQFVIVDERDRALYLFTVDADTTVISAKV 168 (316)
T ss_pred ceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEe-cCCEEEEEehhcceEEEEEEcCCccEEeccc
Confidence 3567888886666555555556666678877766421 1222456665 5566666666677777775543311
Q ss_pred ----ceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 76 ----IQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 76 ----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+......+.....++|+|..+.|+++-+.+.+.|+.+
T Consensus 169 ~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~ 209 (316)
T COG3204 169 QKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEV 209 (316)
T ss_pred eEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEE
Confidence 1111222456788999999999999888888887754
No 402
>KOG4441|consensus
Probab=93.68 E-value=1.1 Score=30.55 Aligned_cols=97 Identities=10% Similarity=0.101 Sum_probs=49.2
Q ss_pred cCCCCEEEeeecC------CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCc-----EEEEeCCcccc
Q psy3639 7 TSSPQRCLTGSYD------RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKT-----LKLWASAKEEC 75 (113)
Q Consensus 7 ~~~~~~~~~~~~d------~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----v~~wd~~~~~~ 75 (113)
..++..+++|+.| ..+..||..+.+ ...+..-..+-.......-++.+.+.|+.||. +-.||..+.+.
T Consensus 330 ~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~-W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W 408 (571)
T KOG4441|consen 330 VLNGKLYVVGGYDSGSDRLSSVERYDPRTNQ-WTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKW 408 (571)
T ss_pred EECCEEEEEccccCCCcccceEEEecCCCCc-eeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcc
Confidence 3456788889988 345567776554 22221111111222222245788889998864 77788776543
Q ss_pred ceeecccccceEEEEE-ccCCCEEEEeecCC
Q psy3639 76 IQTYRGHSAEVVGVTF-SPDQSTFCSCSMDH 105 (113)
Q Consensus 76 ~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~ 105 (113)
-..-.-.. ....... .-+|...++|+.++
T Consensus 409 ~~va~m~~-~r~~~gv~~~~g~iYi~GG~~~ 438 (571)
T KOG4441|consen 409 TPVAPMLT-RRSGHGVAVLGGKLYIIGGGDG 438 (571)
T ss_pred cccCCCCc-ceeeeEEEEECCEEEEEcCcCC
Confidence 22211111 1111111 12566667776554
No 403
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=93.68 E-value=0.91 Score=27.42 Aligned_cols=105 Identities=13% Similarity=0.064 Sum_probs=58.6
Q ss_pred cceEcCCCCEEEeee-cCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe-CCcccc-ceee
Q psy3639 3 VPRVTSSPQRCLTGS-YDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA-SAKEEC-IQTY 79 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~-~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd-~~~~~~-~~~~ 79 (113)
-.+++++++.++... .++.-.+|-...+....... ....+..-.|. +++..+.....+...+++. ..++.. ....
T Consensus 28 s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d-~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v 105 (253)
T PF10647_consen 28 SPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWD-PDGWVWTVDDGSGGVRVVRDSASGTGEPVEV 105 (253)
T ss_pred ceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec-cCCcccccccc-CCCCEEEEEcCCCceEEEEecCCCcceeEEe
Confidence 356888998776544 22223344433343333322 22356777888 5577766666666666663 223321 1111
Q ss_pred ccc--ccceEEEEEccCCCEEEEee---cCCcEEE
Q psy3639 80 RGH--SAEVVGVTFSPDQSTFCSCS---MDHTARI 109 (113)
Q Consensus 80 ~~~--~~~v~~~~~~~~~~~~~~~~---~~~~i~~ 109 (113)
... ...|..+++||||..++... .++.+.+
T Consensus 106 ~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~v 140 (253)
T PF10647_consen 106 DWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYV 140 (253)
T ss_pred cccccCCceEEEEECCCCcEEEEEEecCCCCeEEE
Confidence 111 12899999999999887655 2455554
No 404
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=93.57 E-value=1.4 Score=29.31 Aligned_cols=100 Identities=17% Similarity=0.127 Sum_probs=61.5
Q ss_pred CCEEEeeecCCeEEEe-eCCCC-e----eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 10 PQRCLTGSYDRTCKLW-DIKSG-H----EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~-~~~~~-~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
+..++..++||.|.-| |.+.+ . .++.++-...++..+.-. .+.+.+++-+.+|++..+.....+.+..... -
T Consensus 280 g~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe-~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~-~ 357 (733)
T COG4590 280 GFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPE-TNRKGFYSLYRNGTLQSFYSTSEKLLLFERA-Y 357 (733)
T ss_pred ceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccc-cccceEEEEcCCCceeeeecccCcceehhhh-h
Confidence 4567888899988866 44332 1 223333233445554433 4456788888899998886555543332222 2
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
+....+++||.++++++-. .|.++++.+
T Consensus 358 ~~~~~~~~Sp~~~~Ll~e~-~gki~~~~l 385 (733)
T COG4590 358 QAPQLVAMSPNQAYLLSED-QGKIRLAQL 385 (733)
T ss_pred cCcceeeeCcccchheeec-CCceEEEEe
Confidence 3456689999999887754 567777654
No 405
>KOG1916|consensus
Probab=93.49 E-value=0.049 Score=38.41 Aligned_cols=76 Identities=16% Similarity=0.287 Sum_probs=46.4
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEE-----------EEcCCCCCEEEEEeCCCcEEEEeCC---
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAV-----------AFSEPYGDKILTGSFDKTLKLWASA--- 71 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~~~~~~~~~~~v~~wd~~--- 71 (113)
+.++.-++..+..++.+++-+..+... ..+.+|...+..+ .++ ++|..++....||.+++|.+.
T Consensus 191 ~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lS-pDGtv~a~a~~dG~v~f~Qiyi~g 268 (1283)
T KOG1916|consen 191 IAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLS-PDGTVFAWAISDGSVGFYQIYITG 268 (1283)
T ss_pred cccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeC-CCCcEEEEeecCCccceeeeeeec
Confidence 344555666777788888766543221 2233354333322 245 889999999999999988753
Q ss_pred --ccccceeecccc
Q psy3639 72 --KEECIQTYRGHS 83 (113)
Q Consensus 72 --~~~~~~~~~~~~ 83 (113)
...++...+.|.
T Consensus 269 ~~~~rclhewkphd 282 (1283)
T KOG1916|consen 269 KIVHRCLHEWKPHD 282 (1283)
T ss_pred cccHhhhhccCCCC
Confidence 234555555554
No 406
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=93.46 E-value=0.26 Score=20.42 Aligned_cols=27 Identities=22% Similarity=0.148 Sum_probs=19.0
Q ss_pred EEEEEeCCCcEEEEeCCccccceeecc
Q psy3639 55 KILTGSFDKTLKLWASAKEECIQTYRG 81 (113)
Q Consensus 55 ~~~~~~~~~~v~~wd~~~~~~~~~~~~ 81 (113)
.+++...++.|.++|..+++.+.....
T Consensus 6 lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 6 LYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 444455578999999988776666654
No 407
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=93.38 E-value=0.81 Score=25.90 Aligned_cols=28 Identities=14% Similarity=0.358 Sum_probs=22.6
Q ss_pred cceEEEEEccCC------CEEEEeecCCcEEEee
Q psy3639 84 AEVVGVTFSPDQ------STFCSCSMDHTARIFN 111 (113)
Q Consensus 84 ~~v~~~~~~~~~------~~~~~~~~~~~i~~~~ 111 (113)
..+..++|||.| -.|++-+.++.+.+|.
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~ 119 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYG 119 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEe
Confidence 378899999944 3678889999999985
No 408
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=93.14 E-value=1.1 Score=26.56 Aligned_cols=49 Identities=8% Similarity=0.167 Sum_probs=34.7
Q ss_pred CEEEEEeCCCcEEEEeCCc--cccceeecccccceEEEEEccCCCEEEEeec
Q psy3639 54 DKILTGSFDKTLKLWASAK--EECIQTYRGHSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 54 ~~~~~~~~~~~v~~wd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
..+..+...+.|.+|++.. .+.+..+..- +.|..+.++..|+++++-=.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEe
Confidence 3333335667899999883 3455666644 67889999999999988533
No 409
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=93.10 E-value=1.2 Score=26.94 Aligned_cols=59 Identities=15% Similarity=0.298 Sum_probs=39.6
Q ss_pred CCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 51 PYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 51 ~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..++.++.|..+| +.+++........... ....|..+..-|+-+.+++-+ |+.++++++
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L 63 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDL 63 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEc
Confidence 3467888899998 8888883322222222 223488888888777766654 489999886
No 410
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=92.99 E-value=2.3 Score=30.09 Aligned_cols=72 Identities=10% Similarity=0.084 Sum_probs=47.0
Q ss_pred CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc----cceeec----c----c---ccceEEEEEccCCCEEEEeecC
Q psy3639 40 QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE----CIQTYR----G----H---SAEVVGVTFSPDQSTFCSCSMD 104 (113)
Q Consensus 40 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~----~~~~~~----~----~---~~~v~~~~~~~~~~~~~~~~~~ 104 (113)
..+..+++|+|-+...++..+..|...+|++.... ....+. + + ...-..+.|.++.+.|++++.
T Consensus 145 g~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r- 223 (765)
T PF10214_consen 145 GFPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR- 223 (765)
T ss_pred CCccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-
Confidence 34678999998888899999999999999992111 011110 0 0 112236888887777777754
Q ss_pred CcEEEeec
Q psy3639 105 HTARIFNT 112 (113)
Q Consensus 105 ~~i~~~~~ 112 (113)
..+.++|+
T Consensus 224 ~~l~~~d~ 231 (765)
T PF10214_consen 224 SKLMLIDF 231 (765)
T ss_pred CceEEEEC
Confidence 45566665
No 411
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.85 E-value=1.5 Score=27.41 Aligned_cols=80 Identities=16% Similarity=0.218 Sum_probs=51.6
Q ss_pred EEeeCCCCeeeEEeeCCCC--eEEEEEEcCCCCCEEEEEeCC-----CcEEEEeCCcc-ccceeecccccceEEEEEccC
Q psy3639 23 KLWDIKSGHEICTYRGHQN--VVYAVAFSEPYGDKILTGSFD-----KTLKLWASAKE-ECIQTYRGHSAEVVGVTFSPD 94 (113)
Q Consensus 23 ~i~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~-----~~v~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~ 94 (113)
.++|........++...+. .--.-.|+ +++.+++..-.| |.|-+||.+.+ +.+-.+..+.-....+.+.+|
T Consensus 94 ~vfD~~~~~~pv~~~s~~~RHfyGHGvfs-~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~D 172 (366)
T COG3490 94 MVFDPNGAQEPVTLVSQEGRHFYGHGVFS-PDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMAD 172 (366)
T ss_pred EEECCCCCcCcEEEecccCceeecccccC-CCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecC
Confidence 3566555544444432211 11223466 778887765443 67999998864 456677777777788999999
Q ss_pred CCEEEEeec
Q psy3639 95 QSTFCSCSM 103 (113)
Q Consensus 95 ~~~~~~~~~ 103 (113)
|+.++++..
T Consensus 173 GrtlvvanG 181 (366)
T COG3490 173 GRTLVVANG 181 (366)
T ss_pred CcEEEEeCC
Confidence 999987643
No 412
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=92.51 E-value=0.37 Score=19.75 Aligned_cols=27 Identities=19% Similarity=0.218 Sum_probs=17.6
Q ss_pred cceEEEEEccCCCEEEEeec-C--CcEEEe
Q psy3639 84 AEVVGVTFSPDQSTFCSCSM-D--HTARIF 110 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~-~--~~i~~~ 110 (113)
.......|+|||+.|+-.+. + |...||
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 45567899999998865544 4 555555
No 413
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=92.27 E-value=0.35 Score=18.88 Aligned_cols=25 Identities=32% Similarity=0.316 Sum_probs=19.6
Q ss_pred CEEEeeecCCeEEEeeCCCCeeeEE
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEICT 35 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~~~ 35 (113)
..++.++.++.+..+|..+++.+..
T Consensus 7 ~~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 7 GTVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred CEEEEEcCCCEEEEEEcccCcEEEE
Confidence 3577777889999999988887654
No 414
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=91.99 E-value=1.2 Score=24.35 Aligned_cols=86 Identities=9% Similarity=0.062 Sum_probs=53.3
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCCCC--------eeeEEeeCCCCeEEEEEEcC---CC-CCEEEEEeCCCcEEEEeC
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIKSG--------HEICTYRGHQNVVYAVAFSE---PY-GDKILTGSFDKTLKLWAS 70 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~~~--------~~~~~~~~~~~~v~~~~~~~---~~-~~~~~~~~~~~~v~~wd~ 70 (113)
+-++.....-|++++..++|.+++.... ..+..+. ....|++++-.+ .. ...|+.|+. ..+..||+
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYDV 80 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDV 80 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEc
Confidence 4456666677888889999999987643 2344444 445566665442 22 345666655 56889999
Q ss_pred CccccceeecccccceEEEEE
Q psy3639 71 AKEECIQTYRGHSAEVVGVTF 91 (113)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~~~ 91 (113)
....-++.-. -...++++.+
T Consensus 81 ~~N~d~Fyke-~~DGvn~i~~ 100 (136)
T PF14781_consen 81 ENNSDLFYKE-VPDGVNAIVI 100 (136)
T ss_pred ccCchhhhhh-CccceeEEEE
Confidence 8765444333 2345666665
No 415
>KOG3630|consensus
Probab=91.99 E-value=0.79 Score=33.63 Aligned_cols=86 Identities=19% Similarity=0.190 Sum_probs=51.7
Q ss_pred EEeeecCCeEEEeeCCCCee-eEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc--ccceeeccc-ccceEE
Q psy3639 13 CLTGSYDRTCKLWDIKSGHE-ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE--ECIQTYRGH-SAEVVG 88 (113)
Q Consensus 13 ~~~~~~d~~v~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~--~~~~~~~~~-~~~v~~ 88 (113)
.+....|+.|++..+..... ...+ ......++++|+ +.|..++.|..+|++..|...-. ..+...... .-.|.+
T Consensus 171 ~av~l~dlsl~V~~~~~~~~~v~s~-p~t~~~Tav~WS-prGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~ 248 (1405)
T KOG3630|consen 171 SAVDLSDLSLRVKSTKQLAQNVTSF-PVTNSQTAVLWS-PRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLS 248 (1405)
T ss_pred hhhhccccchhhhhhhhhhhhhccc-CcccceeeEEec-cccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeE
Confidence 44455566666665433221 1122 245668999999 78999999999999998864322 122222211 356788
Q ss_pred EEEccCCCEEEE
Q psy3639 89 VTFSPDQSTFCS 100 (113)
Q Consensus 89 ~~~~~~~~~~~~ 100 (113)
+.|-..-.++++
T Consensus 249 v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 249 VTWLSTQEFLVV 260 (1405)
T ss_pred EEEecceeEEEE
Confidence 888655555443
No 416
>PHA03098 kelch-like protein; Provisional
Probab=91.82 E-value=2.7 Score=28.17 Aligned_cols=100 Identities=5% Similarity=0.092 Sum_probs=45.3
Q ss_pred CCCCEEEeeecC------CeEEEeeCCCCeeeEEeeCCCCe--EEEEEEcCCCCCEEEEEeCCC--------cEEEEeCC
Q psy3639 8 SSPQRCLTGSYD------RTCKLWDIKSGHEICTYRGHQNV--VYAVAFSEPYGDKILTGSFDK--------TLKLWASA 71 (113)
Q Consensus 8 ~~~~~~~~~~~d------~~v~i~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~--------~v~~wd~~ 71 (113)
.++++++.|+.+ ..+..||..+.+ .........+ -.++.. .++..++.|+.++ .+..||..
T Consensus 388 ~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 464 (534)
T PHA03098 388 VNNLIYVIGGISKNDELLKTVECFSLNTNK-WSKGSPLPISHYGGCAIY--HDGKIYVIGGISYIDNIKVYNIVESYNPV 464 (534)
T ss_pred ECCEEEEECCcCCCCcccceEEEEeCCCCe-eeecCCCCccccCceEEE--ECCEEEEECCccCCCCCcccceEEEecCC
Confidence 355666777632 346677876543 1111110000 011222 2345556665432 37788887
Q ss_pred ccccce--eecccccceEEEEEccCCCEEEEeecC-----CcEEEeec
Q psy3639 72 KEECIQ--TYRGHSAEVVGVTFSPDQSTFCSCSMD-----HTARIFNT 112 (113)
Q Consensus 72 ~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~~~ 112 (113)
+.+... .+.........+.+ ++..++.|+.+ +.+.+||.
T Consensus 465 ~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 510 (534)
T PHA03098 465 TNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDD 510 (534)
T ss_pred CCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeC
Confidence 654322 11111111111222 56666666654 45677765
No 417
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=91.78 E-value=3.5 Score=29.33 Aligned_cols=71 Identities=10% Similarity=0.116 Sum_probs=47.2
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCe--------EEEEEEc-C--------------CCCCEEEEEeCCCcEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNV--------VYAVAFS-E--------------PYGDKILTGSFDKTLK 66 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~--------v~~~~~~-~--------------~~~~~~~~~~~~~~v~ 66 (113)
+..++.++.++.|.-.|..+|+.+..++..... ...+.+- . ..+..++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 455666677788888999999988777532211 1112211 0 1234677888899999
Q ss_pred EEeCCccccceeec
Q psy3639 67 LWASAKEECIQTYR 80 (113)
Q Consensus 67 ~wd~~~~~~~~~~~ 80 (113)
-.|.++++.+..+.
T Consensus 274 ALDA~TGk~~W~fg 287 (764)
T TIGR03074 274 ALDADTGKLCEDFG 287 (764)
T ss_pred EEECCCCCEEEEec
Confidence 99999998877654
No 418
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=91.66 E-value=0.86 Score=22.97 Aligned_cols=41 Identities=20% Similarity=0.114 Sum_probs=25.5
Q ss_pred eCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEe
Q psy3639 60 SFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSC 101 (113)
Q Consensus 60 ~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 101 (113)
..+|.+.-||+.+++..-.+. .-.-.+.++.++++.+++++
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~-~L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLD-GLYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEE-EESSEEEEEE-TTSSEEEEE
T ss_pred CCCcCEEEEECCCCeEEEehh-CCCccCeEEEcCCCCEEEEE
Confidence 445778889988876433333 22345789999999977665
No 419
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=91.27 E-value=2.4 Score=26.44 Aligned_cols=68 Identities=15% Similarity=0.194 Sum_probs=44.0
Q ss_pred EEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceE-----EEEEccCCCEEEEeecCCcEEEee
Q psy3639 43 VYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVV-----GVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 43 v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
+.++... .+|.+|++.-.-..|.+.|.++++.+..+.+....-. .+++-.+-+++-....++.|.++|
T Consensus 146 iNsV~~~-~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFD 218 (299)
T PF14269_consen 146 INSVDKD-DDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFD 218 (299)
T ss_pred eeeeeec-CCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEc
Confidence 4566665 6678899888888899999889888888765522111 133433444443445667777775
No 420
>KOG4441|consensus
Probab=91.19 E-value=3.2 Score=28.41 Aligned_cols=92 Identities=14% Similarity=0.250 Sum_probs=49.3
Q ss_pred CCEEEeeecCC------eEEEeeCCCCee--eEEeeCCCCeEEEEEEcCCCCCEEEEEeCC-C-----cEEEEeCCcccc
Q psy3639 10 PQRCLTGSYDR------TCKLWDIKSGHE--ICTYRGHQNVVYAVAFSEPYGDKILTGSFD-K-----TLKLWASAKEEC 75 (113)
Q Consensus 10 ~~~~~~~~~d~------~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~-----~v~~wd~~~~~~ 75 (113)
+.+++.|+.++ .+..||..++.- ...+. ....-.+++.. ++...++|+.+ | .+..||.+..+.
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W 361 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPRTNQW 361 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEE--CCEEEEEccccCCCcccceEEEecCCCCce
Confidence 45777787773 566788776632 22222 11222333333 36778888888 3 477788877653
Q ss_pred ce--eecccccceEEEEEccCCCEEEEeecCCc
Q psy3639 76 IQ--TYRGHSAEVVGVTFSPDQSTFCSCSMDHT 106 (113)
Q Consensus 76 ~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 106 (113)
.. .+........ ++ .-+|...++|+.||.
T Consensus 362 ~~~a~M~~~R~~~~-v~-~l~g~iYavGG~dg~ 392 (571)
T KOG4441|consen 362 TPVAPMNTKRSDFG-VA-VLDGKLYAVGGFDGE 392 (571)
T ss_pred eccCCccCccccce-eE-EECCEEEEEeccccc
Confidence 33 2221111111 11 126777778877753
No 421
>KOG2247|consensus
Probab=91.05 E-value=0.065 Score=35.27 Aligned_cols=91 Identities=11% Similarity=0.136 Sum_probs=59.2
Q ss_pred cCCCC-EEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccc
Q psy3639 7 TSSPQ-RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE 85 (113)
Q Consensus 7 ~~~~~-~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~ 85 (113)
+.++. .++.+-..+.+.+|++.+....+.-.+-...-.-+.|+ +....++.+...|.+.+++..+.+.......|..+
T Consensus 83 DkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~ws-Kg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RR 161 (615)
T KOG2247|consen 83 DKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWS-KGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRR 161 (615)
T ss_pred ccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhc-cCCccccccccccceEEEeccchhhhhhhcccccc
Confidence 33444 34456667889999986543221111122222336788 66777788888899999998887766666657778
Q ss_pred eEEEEEccCCCEE
Q psy3639 86 VVGVTFSPDQSTF 98 (113)
Q Consensus 86 v~~~~~~~~~~~~ 98 (113)
+..+++.+.+..+
T Consensus 162 gtq~av~lEd~vi 174 (615)
T KOG2247|consen 162 GTQIAVTLEDYVI 174 (615)
T ss_pred eeEEEecccceee
Confidence 8889998876543
No 422
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=90.73 E-value=4 Score=28.10 Aligned_cols=97 Identities=7% Similarity=0.045 Sum_probs=54.2
Q ss_pred EEEeeecCCeEEEeeCCC-----Ceee--EEeeC---CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc--ceee
Q psy3639 12 RCLTGSYDRTCKLWDIKS-----GHEI--CTYRG---HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC--IQTY 79 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~-----~~~~--~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~--~~~~ 79 (113)
++|+- ....|.+|.+.. ++.+ ++.+- ..-.-....|+ |....++.-.....-.+++++.... ..-+
T Consensus 75 LLAVQ-HkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWH-Pk~~iL~VLT~~dvSV~~sV~~d~srVkaDi 152 (671)
T PF15390_consen 75 LLAVQ-HKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWH-PKKAILTVLTARDVSVLPSVHCDSSRVKADI 152 (671)
T ss_pred eEEEe-ccceEEEEEeccCccccccceeeeeeeccCCcccCCCccccc-CCCceEEEEecCceeEeeeeeeCCceEEEec
Confidence 44444 457899998752 1211 11111 11112456788 5566666665544434555544322 2223
Q ss_pred cccccceEEEEEccCCCEEEEeecC-CcEEEee
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMD-HTARIFN 111 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~~~ 111 (113)
+ ..+.|.+-+|.+||+.++++-.. =+-++||
T Consensus 153 ~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 153 K-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred c-CCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 2 45679999999999988776433 3566776
No 423
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=90.18 E-value=4.3 Score=27.52 Aligned_cols=68 Identities=18% Similarity=0.209 Sum_probs=45.1
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCC-eEEE----------EEEcCCCCCEEEEEeCCCcEEEEeCCcccccee
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQN-VVYA----------VAFSEPYGDKILTGSFDKTLKLWASAKEECIQT 78 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~-~v~~----------~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~ 78 (113)
+..++.++.++.|.-.|..+++.+..+..... .+.. ++.. +..++.++.++.+.-.|..+++.+..
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~---~~~v~v~t~dg~l~ALDa~TGk~~W~ 145 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY---DGKVFFGTLDARLVALDAKTGKVVWS 145 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE---CCEEEEEcCCCEEEEEECCCCCEEee
Confidence 34566666678888889999998877653211 1111 1121 34566778889999999999987766
Q ss_pred ec
Q psy3639 79 YR 80 (113)
Q Consensus 79 ~~ 80 (113)
..
T Consensus 146 ~~ 147 (527)
T TIGR03075 146 KK 147 (527)
T ss_pred cc
Confidence 54
No 424
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=89.98 E-value=0.79 Score=18.80 Aligned_cols=26 Identities=19% Similarity=0.291 Sum_probs=21.4
Q ss_pred EEeeecCCeEEEeeCCCCeeeEEeeC
Q psy3639 13 CLTGSYDRTCKLWDIKSGHEICTYRG 38 (113)
Q Consensus 13 ~~~~~~d~~v~i~~~~~~~~~~~~~~ 38 (113)
+..++.+|.++-.|.++|+.+..++.
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 45568899999999999998887763
No 425
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=89.78 E-value=3.9 Score=26.43 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=37.0
Q ss_pred EEEEEEcCCCCCEEE-EEeCCC----cEEEEeCCccccceeecccccceEEEEEccCCCEEEEeec
Q psy3639 43 VYAVAFSEPYGDKIL-TGSFDK----TLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 43 v~~~~~~~~~~~~~~-~~~~~~----~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
+....++ |++++++ +.+..| .++++|+.+++.+...-.. .....+.|.++++.|+-...
T Consensus 126 ~~~~~~S-pdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~ 189 (414)
T PF02897_consen 126 LGGFSVS-PDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRF 189 (414)
T ss_dssp EEEEEET-TTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEEC
T ss_pred eeeeeEC-CCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEe
Confidence 3467788 6777665 434444 4999999999765432111 11223999999887765543
No 426
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=89.68 E-value=4.1 Score=26.61 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=37.5
Q ss_pred CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeeccc-ccceEEEEEccCC
Q psy3639 41 NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH-SAEVVGVTFSPDQ 95 (113)
Q Consensus 41 ~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~ 95 (113)
+++..++.+ |+++.++.-..+|.+.+....-.+.+..+... ......+.|+-+.
T Consensus 217 ~~i~~iavS-png~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 217 GPIIKIAVS-PNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred CCeEEEEEC-CCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 579999999 88999998899999888865544444444433 2344567776443
No 427
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=89.62 E-value=4.3 Score=26.72 Aligned_cols=102 Identities=15% Similarity=0.271 Sum_probs=58.8
Q ss_pred CCEEEeeecCCeEEEeeCCCCe-----eeEEeeCCCCeEEEEEEcC---CCCCEEEEEeCCCcEEEEeCCc--cc-----
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGH-----EICTYRGHQNVVYAVAFSE---PYGDKILTGSFDKTLKLWASAK--EE----- 74 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~-----~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~v~~wd~~~--~~----- 74 (113)
...+++|+..|.++||+..... .+.+.+ -..||..+..-. .......+.-.-..+.+|.+.. +.
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~-l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQ-LKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEe-cCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence 3589999999999999985432 222222 456777776542 2223333335556777776621 11
Q ss_pred --cceeeccc--ccceEEEEEcc----C-CCEEEEeecCCcEEEeec
Q psy3639 75 --CIQTYRGH--SAEVVGVTFSP----D-QSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 75 --~~~~~~~~--~~~v~~~~~~~----~-~~~~~~~~~~~~i~~~~~ 112 (113)
.+.....| ....+++.+-| . ..++++-+.||.+.+++-
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feq 162 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQ 162 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeC
Confidence 12222222 22334444433 2 357888999999999874
No 428
>KOG4460|consensus
Probab=89.29 E-value=5.3 Score=27.31 Aligned_cols=70 Identities=17% Similarity=0.271 Sum_probs=45.8
Q ss_pred eEEEEEEcCCCCCEEEEEeCCCcEEEEeC---------Cccccceeec-----------ccccceEEEEEccCC---CEE
Q psy3639 42 VVYAVAFSEPYGDKILTGSFDKTLKLWAS---------AKEECIQTYR-----------GHSAEVVGVTFSPDQ---STF 98 (113)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~~~~~v~~wd~---------~~~~~~~~~~-----------~~~~~v~~~~~~~~~---~~~ 98 (113)
.|..+..+ +.|..++-.+.+|.+.++=. .+++..-..+ ...-.+...+|+|+. .++
T Consensus 105 eV~~vl~s-~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 105 EVYQVLLS-PTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEec-CCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 35677788 77888888888887666531 2232211110 112245678899965 577
Q ss_pred EEeecCCcEEEeec
Q psy3639 99 CSCSMDHTARIFNT 112 (113)
Q Consensus 99 ~~~~~~~~i~~~~~ 112 (113)
..-..|+.+++||+
T Consensus 184 ~iL~sdnviRiy~l 197 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSL 197 (741)
T ss_pred EEEecCcEEEEEec
Confidence 78888999999986
No 429
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=89.24 E-value=3.9 Score=25.66 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=37.1
Q ss_pred CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 39 HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 39 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
....+..+... +++.+++.+..-....-||.-.............++.++.|.|++...+.+ ..|.|++=+
T Consensus 143 ~~gs~~~~~r~-~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 143 TSGSINDITRS-SDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp ----EEEEEE--TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred CcceeEeEEEC-CCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 44567777777 778877777655555667754332222222245789999999998765544 677776543
No 430
>KOG3616|consensus
Probab=89.10 E-value=1.1 Score=31.74 Aligned_cols=62 Identities=11% Similarity=0.175 Sum_probs=38.7
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA 69 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd 69 (113)
+..+|.++.++.++.||.+.+||........... ...|-..+.|. +..+++...|..+.-|.
T Consensus 20 iqshp~~~s~v~~~~d~si~lfn~~~r~qski~~-~~~p~~nlv~t---nhgl~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 20 IQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE-EAKPKENLVFT---NHGLVTATSDRRALAWK 81 (1636)
T ss_pred eeecCCCceEEEEecCCcEEEEeecccchhhhhh-hcCCccceeee---ccceEEEeccchhheee
Confidence 3456889999999999999999986544322222 22233344444 34456666666666664
No 431
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=89.07 E-value=3.7 Score=25.22 Aligned_cols=94 Identities=9% Similarity=0.076 Sum_probs=55.5
Q ss_pred CCCCEEEeeecCCeEEEeeCCCCeeeEEeeCC--C---CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec--
Q psy3639 8 SSPQRCLTGSYDRTCKLWDIKSGHEICTYRGH--Q---NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR-- 80 (113)
Q Consensus 8 ~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~-- 80 (113)
.+++.++.+.....++.+|..+.+....+... . ..+..+.+. +|...+=.-....|...|..+++....+.
T Consensus 137 ~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i--~G~IyANVW~td~I~~Idp~tG~V~~~iDls 214 (264)
T PF05096_consen 137 SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI--NGKIYANVWQTDRIVRIDPETGKVVGWIDLS 214 (264)
T ss_dssp ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE--TTEEEEEETTSSEEEEEETTT-BEEEEEE-H
T ss_pred cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE--cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhh
Confidence 46677777777788999998887766555422 2 235566665 35555555555667777888876544331
Q ss_pred -------------ccccceEEEEEccCCCEEEEeec
Q psy3639 81 -------------GHSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 81 -------------~~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
....-.+.++|.|....+++.+.
T Consensus 215 ~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 215 GLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp HHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred HhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence 01234688999997776666554
No 432
>PHA03098 kelch-like protein; Provisional
Probab=88.66 E-value=5.6 Score=26.76 Aligned_cols=62 Identities=10% Similarity=0.124 Sum_probs=30.6
Q ss_pred CCCEEEeeecCC------eEEEeeCCCCeeeEEeeC---CCCeEEEEEEcCCCCCEEEEEeCC-----CcEEEEeCCccc
Q psy3639 9 SPQRCLTGSYDR------TCKLWDIKSGHEICTYRG---HQNVVYAVAFSEPYGDKILTGSFD-----KTLKLWASAKEE 74 (113)
Q Consensus 9 ~~~~~~~~~~d~------~v~i~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~-----~~v~~wd~~~~~ 74 (113)
++.+++.|+.++ .+..||..+.+- ..+.. .......+. .++..++.|+.+ ..+..||..+.+
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~R~~~~~~~---~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 369 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSW-NKVPELIYPRKNPGVTV---FNNRIYVIGGIYNSISLNTVESWKPGESK 369 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCee-eECCCCCcccccceEEE---ECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence 445666666532 356677665432 11111 111112222 235666777765 246678876654
No 433
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=88.62 E-value=0.86 Score=17.36 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=16.5
Q ss_pred eEEEEEccCCCEEEEeecCCcEEEe
Q psy3639 86 VVGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
...++.+++|+.+++-...+.|.+|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 3567777777776666666666654
No 434
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=88.11 E-value=3.1 Score=28.30 Aligned_cols=59 Identities=15% Similarity=0.142 Sum_probs=42.7
Q ss_pred CCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWAS 70 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~ 70 (113)
.-+++.++..|-|++||-........+.+....|..+... .+|..+++.+. .++.+-|+
T Consensus 573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvt-a~Gk~ilaTCk-~yllL~d~ 631 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVT-ANGKHILATCK-NYLLLTDV 631 (776)
T ss_pred CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEee-cCCcEEEEeec-ceEEEEec
Confidence 3478899999999999965444444556667778888888 77877766555 46667765
No 435
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=87.97 E-value=0.99 Score=17.32 Aligned_cols=24 Identities=0% Similarity=0.126 Sum_probs=18.5
Q ss_pred cceEcCCCCEEEeeecCCeEEEee
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWD 26 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~ 26 (113)
+.++.-.+.+++.+...+.+|+|+
T Consensus 4 i~aia~g~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 4 IEAIAAGDSWVAVATSAGYLRIFS 27 (27)
T ss_pred EEEEEccCCEEEEEeCCCeEEecC
Confidence 445666777888888888999874
No 436
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=87.85 E-value=5 Score=25.23 Aligned_cols=106 Identities=11% Similarity=0.115 Sum_probs=55.4
Q ss_pred eEcCCCCEEEeeec-----------CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeC-CCcEEEEeCCc
Q psy3639 5 RVTSSPQRCLTGSY-----------DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-DKTLKLWASAK 72 (113)
Q Consensus 5 ~~~~~~~~~~~~~~-----------d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~v~~wd~~~ 72 (113)
.+.|+|.+.+.-.. -|.++.++. .+.....+..+-..-..++|+ |+++.++.... .+.+.-|++..
T Consensus 117 ~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~S-pDg~tly~aDT~~~~i~r~~~d~ 194 (307)
T COG3386 117 VVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFS-PDGKTLYVADTPANRIHRYDLDP 194 (307)
T ss_pred eEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEEC-CCCCEEEEEeCCCCeEEEEecCc
Confidence 45666665554322 133333343 455555555555566889999 66766555544 57788777652
Q ss_pred --cc---c--ceeecccccceEEEEEccCCCEEEEeecCC-cEEEeec
Q psy3639 73 --EE---C--IQTYRGHSAEVVGVTFSPDQSTFCSCSMDH-TARIFNT 112 (113)
Q Consensus 73 --~~---~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~i~~~~~ 112 (113)
+. . ...+....+..=.++...+|++.+.+..+| .|..|+.
T Consensus 195 ~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~p 242 (307)
T COG3386 195 ATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNP 242 (307)
T ss_pred ccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECC
Confidence 11 1 111111122223455666777664444443 6766653
No 437
>KOG1900|consensus
Probab=87.12 E-value=11 Score=28.52 Aligned_cols=87 Identities=15% Similarity=0.271 Sum_probs=51.7
Q ss_pred ecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCC--------EEEEEeCCCcEEEEeCC----ccc-----cceee
Q psy3639 17 SYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGD--------KILTGSFDKTLKLWASA----KEE-----CIQTY 79 (113)
Q Consensus 17 ~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~~~~~~~~~v~~wd~~----~~~-----~~~~~ 79 (113)
+.|..+.+|+..++.....+.+-...|..+.+-.|... +++.++. -.+.++-+. ++. ...++
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~-~ei~ilgV~~~~~~~~~~~f~~~~~i 174 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATP-VEIVILGVSFDEFTGELSIFNTSFKI 174 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEeccc-ceEEEEEEEeccccCcccccccceee
Confidence 34778999999988878888777777777665423332 2333332 234444321 111 01233
Q ss_pred cccccceEEEEEccCCCEEEEeecC
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSMD 104 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~~ 104 (113)
...+-.|.++....+|+.|++|-.+
T Consensus 175 ~~dg~~V~~I~~t~nGRIF~~G~dg 199 (1311)
T KOG1900|consen 175 SVDGVSVNCITYTENGRIFFAGRDG 199 (1311)
T ss_pred ecCCceEEEEEeccCCcEEEeecCC
Confidence 3345678888888899977776544
No 438
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=86.93 E-value=9.3 Score=27.38 Aligned_cols=79 Identities=11% Similarity=0.149 Sum_probs=46.6
Q ss_pred CeEEEeeCCCCeeeEEeeCC--C----------------CeEEEEEEcCCCCCEEEE-EeCCCcEEEEeCCccccceeec
Q psy3639 20 RTCKLWDIKSGHEICTYRGH--Q----------------NVVYAVAFSEPYGDKILT-GSFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 20 ~~v~i~~~~~~~~~~~~~~~--~----------------~~v~~~~~~~~~~~~~~~-~~~~~~v~~wd~~~~~~~~~~~ 80 (113)
|.|.-+|+.+++.+...... . .+...-... ..+.+++. ++.|+.++-+|.++++.+.+.+
T Consensus 641 G~l~AiDl~tGk~~W~~~~g~~~~~~p~~~~~~~~~~~g~p~~gG~l~-TagglvF~~gt~d~~l~A~D~~tGk~lW~~~ 719 (764)
T TIGR03074 641 GYMAAIDLKTGKVVWQHPNGTVRDTGPMGIRMPLPIPIGVPTLGGPLA-TAGGLVFIGATQDNYLRAYDLSTGKELWKAR 719 (764)
T ss_pred EEEEEEECCCCcEeeeeECCccccccccccccccccccCCcccCCcEE-EcCCEEEEEeCCCCEEEEEECCCCceeeEee
Confidence 67888899888876555421 0 011111111 12345554 7889999999999999888776
Q ss_pred ccccc-eEEEEEc-cCCCEEE
Q psy3639 81 GHSAE-VVGVTFS-PDQSTFC 99 (113)
Q Consensus 81 ~~~~~-v~~~~~~-~~~~~~~ 99 (113)
...+. -.-+.|. .+|+..+
T Consensus 720 l~~~~~a~P~tY~~~~GkQYV 740 (764)
T TIGR03074 720 LPAGGQATPMTYMGKDGKQYV 740 (764)
T ss_pred CCCCcccCCEEEEecCCEEEE
Confidence 43221 1224555 5776543
No 439
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=86.26 E-value=5.2 Score=23.81 Aligned_cols=50 Identities=16% Similarity=0.304 Sum_probs=35.2
Q ss_pred CEEEeeecCCeEEEeeCC--CCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCC
Q psy3639 11 QRCLTGSYDRTCKLWDIK--SGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFD 62 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 62 (113)
+.+..+.....|.+|++. ......++. .-+.|..+..+ ..|.++++--.+
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~-~~GDYlvTlE~k 80 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYS-EAGDYLVTLEEK 80 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEec-cccceEEEEEee
Confidence 444443556789999987 334556665 44788999999 778998886654
No 440
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=85.94 E-value=7 Score=25.03 Aligned_cols=104 Identities=10% Similarity=0.067 Sum_probs=53.7
Q ss_pred ceEcCCCCEEEeeec----------CCeEEEeeCCCCeeeEEeeCCCC-eE------EEEEEcCCCCCEEEEEeCC--Cc
Q psy3639 4 PRVTSSPQRCLTGSY----------DRTCKLWDIKSGHEICTYRGHQN-VV------YAVAFSEPYGDKILTGSFD--KT 64 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~----------d~~v~i~~~~~~~~~~~~~~~~~-~v------~~~~~~~~~~~~~~~~~~~--~~ 64 (113)
..++|+++.++++.. .-.|.+||..+-.+...+.--.. .. ..+.++ .++++++..+.. ..
T Consensus 41 ~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls-~dgk~~~V~N~TPa~S 119 (342)
T PF06433_consen 41 VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALS-ADGKFLYVQNFTPATS 119 (342)
T ss_dssp EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE--TTSSEEEEEEESSSEE
T ss_pred eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEc-cCCcEEEEEccCCCCe
Confidence 356888887776432 34578999988877665542211 11 123444 455555444442 24
Q ss_pred EEEEeCCccccceeecccccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 65 LKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 65 v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
|.+-|+...+.+..+... .+..+--++ .+.|.+-|.||.+.-..
T Consensus 120 VtVVDl~~~kvv~ei~~P--GC~~iyP~~-~~~F~~lC~DGsl~~v~ 163 (342)
T PF06433_consen 120 VTVVDLAAKKVVGEIDTP--GCWLIYPSG-NRGFSMLCGDGSLLTVT 163 (342)
T ss_dssp EEEEETTTTEEEEEEEGT--SEEEEEEEE-TTEEEEEETTSCEEEEE
T ss_pred EEEEECCCCceeeeecCC--CEEEEEecC-CCceEEEecCCceEEEE
Confidence 666666666655555432 222222122 23466666777665443
No 441
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=85.48 E-value=5.5 Score=24.74 Aligned_cols=50 Identities=10% Similarity=0.181 Sum_probs=31.9
Q ss_pred CcEEEEeCCccccceeecccccceEEEEEccCCCEEEEee------cCCcEEEeec
Q psy3639 63 KTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCS------MDHTARIFNT 112 (113)
Q Consensus 63 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~~~~i~~~~~ 112 (113)
..+++||..+.+....-..-.+.|..+.|..+.+.++.|. ....+..||+
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~ 71 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDF 71 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEec
Confidence 3588999877765555555667899999975555555543 2334555554
No 442
>PHA02790 Kelch-like protein; Provisional
Probab=85.45 E-value=8.7 Score=25.68 Aligned_cols=97 Identities=8% Similarity=-0.022 Sum_probs=45.0
Q ss_pred cCCCCEEEeeecCC---eEEEeeCCCCeeeEEe---eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccc--ee
Q psy3639 7 TSSPQRCLTGSYDR---TCKLWDIKSGHEICTY---RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECI--QT 78 (113)
Q Consensus 7 ~~~~~~~~~~~~d~---~v~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~--~~ 78 (113)
..++++++.|+.++ .+..||..+.. .... ........... .++.+.+.| |.+..||..+.+.. ..
T Consensus 360 ~~~g~IYviGG~~~~~~~ve~ydp~~~~-W~~~~~m~~~r~~~~~~~---~~~~IYv~G---G~~e~ydp~~~~W~~~~~ 432 (480)
T PHA02790 360 SINNVIYVIGGHSETDTTTEYLLPNHDQ-WQFGPSTYYPHYKSCALV---FGRRLFLVG---RNAEFYCESSNTWTLIDD 432 (480)
T ss_pred EECCEEEEecCcCCCCccEEEEeCCCCE-EEeCCCCCCccccceEEE---ECCEEEEEC---CceEEecCCCCcEeEcCC
Confidence 34566777777543 35567765432 1111 10111111222 235555555 35677888765432 22
Q ss_pred ecccccceEEEEEccCCCEEEEeecC-----CcEEEeec
Q psy3639 79 YRGHSAEVVGVTFSPDQSTFCSCSMD-----HTARIFNT 112 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~~~~ 112 (113)
+........... -+++..++|+.+ ..+..||.
T Consensus 433 m~~~r~~~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~ 469 (480)
T PHA02790 433 PIYPRDNPELII--VDNKLLLIGGFYRGSYIDTIEVYNN 469 (480)
T ss_pred CCCCccccEEEE--ECCEEEEECCcCCCcccceEEEEEC
Confidence 221111112222 266777777654 34666664
No 443
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=85.38 E-value=11 Score=26.78 Aligned_cols=102 Identities=14% Similarity=0.149 Sum_probs=60.5
Q ss_pred CCEEEeeecCCeEEEeeCCCC--------------------eeeEEeeCCCCeEEEEEEcC-CCCCEEEEEeCCCcEEEE
Q psy3639 10 PQRCLTGSYDRTCKLWDIKSG--------------------HEICTYRGHQNVVYAVAFSE-PYGDKILTGSFDKTLKLW 68 (113)
Q Consensus 10 ~~~~~~~~~d~~v~i~~~~~~--------------------~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~~w 68 (113)
.+.|+.+.+||.|.+|.+++- ++...+. -...+..++++. ...+++|.++....|.+|
T Consensus 114 ~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 114 EEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred eeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 357888999999999966210 0112222 334677888752 223566666666777777
Q ss_pred eCCc--ccccee-ecccccceEEEEEccC-----CC-EEEEeecCCcEEEeec
Q psy3639 69 ASAK--EECIQT-YRGHSAEVVGVTFSPD-----QS-TFCSCSMDHTARIFNT 112 (113)
Q Consensus 69 d~~~--~~~~~~-~~~~~~~v~~~~~~~~-----~~-~~~~~~~~~~i~~~~~ 112 (113)
-... .+.... -..+...|.+++|-++ |. .++.++-.|.+.+|++
T Consensus 193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 4432 221111 1113445777888653 32 6777888999988875
No 444
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=85.16 E-value=6.1 Score=23.68 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=50.2
Q ss_pred CCEEEeeec--CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEE-EEEeCCCcEEEEeCCccccceeecccccce
Q psy3639 10 PQRCLTGSY--DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKI-LTGSFDKTLKLWASAKEECIQTYRGHSAEV 86 (113)
Q Consensus 10 ~~~~~~~~~--d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v 86 (113)
++++.+.+. ...|+.||+.+++.+....-....+..--.. .-+..+ .-.-.+|....+|..+.+.+..+.-. +.=
T Consensus 56 g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit-~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~-GeG 133 (262)
T COG3823 56 GHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGIT-KLGDYFYQLTWKEGVAFKYDADTLEELGRFSYE-GEG 133 (262)
T ss_pred CEEEEeccccccceeEEEeccCceEEEEeecCCcccccccee-eccceEEEEEeccceeEEEChHHhhhhcccccC-Ccc
Confidence 344444333 3458899999887765543221111111111 112222 33345677888898888777666532 333
Q ss_pred EEEEEccCCCEEEEeecCCcEEEe
Q psy3639 87 VGVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
+.+.. ++..++.++...++..-
T Consensus 134 WgLt~--d~~~LimsdGsatL~fr 155 (262)
T COG3823 134 WGLTS--DDKNLIMSDGSATLQFR 155 (262)
T ss_pred eeeec--CCcceEeeCCceEEEec
Confidence 54543 45556665555555443
No 445
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=83.93 E-value=8.6 Score=24.34 Aligned_cols=45 Identities=11% Similarity=0.107 Sum_probs=28.9
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCee---eEEe----eCCCCeEEEEEEcC
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHE---ICTY----RGHQNVVYAVAFSE 50 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~---~~~~----~~~~~~v~~~~~~~ 50 (113)
+++.|+++++++ ...|.|++++ ..+.. +..+ .........++++|
T Consensus 7 ~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p 58 (331)
T PF07995_consen 7 MAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHP 58 (331)
T ss_dssp EEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-T
T ss_pred EEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceecc
Confidence 578899887665 4589999999 34443 2222 12345679999995
No 446
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=83.62 E-value=8.5 Score=24.05 Aligned_cols=59 Identities=12% Similarity=0.034 Sum_probs=38.1
Q ss_pred CEEEeeecCCeEEEeeCCC--CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc
Q psy3639 11 QRCLTGSYDRTCKLWDIKS--GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK 72 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~ 72 (113)
++++.|+++|. ++.+... .+..+.+ +..+|..+...+..+.+++.++....++.+++..
T Consensus 14 ~~lL~GTe~Gl-y~~~~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~ 74 (302)
T smart00036 14 KWLLVGTEEGL-YVLNISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSA 74 (302)
T ss_pred cEEEEEeCCce-EEEEcccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHH
Confidence 68999999985 5555543 2233332 4568899999855444455555555699998743
No 447
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.62 E-value=8.7 Score=24.18 Aligned_cols=74 Identities=9% Similarity=0.113 Sum_probs=43.1
Q ss_pred eCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc-cceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 37 RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS-AEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 37 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.+....+.++.|+ |+.+.+.+......-.++=-.+|+.+.++.-.. .....+.|..++.++++--.++.+.++.
T Consensus 82 ~g~~~nvS~LTyn-p~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~ 156 (316)
T COG3204 82 LGETANVSSLTYN-PDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFT 156 (316)
T ss_pred ccccccccceeeC-CCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEE
Confidence 3455669999999 555555555555565566556677776664221 1223456655555555544455555553
No 448
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=82.89 E-value=9.8 Score=24.22 Aligned_cols=95 Identities=14% Similarity=0.144 Sum_probs=49.9
Q ss_pred CCCC-EEEeeecCCeEEE--eeCCCCeeeEEeeCCCCeEEE-EEEcCCCCCEEEEEeCCC--cEEEE--eCCccccceee
Q psy3639 8 SSPQ-RCLTGSYDRTCKL--WDIKSGHEICTYRGHQNVVYA-VAFSEPYGDKILTGSFDK--TLKLW--ASAKEECIQTY 79 (113)
Q Consensus 8 ~~~~-~~~~~~~d~~v~i--~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~--~v~~w--d~~~~~~~~~~ 79 (113)
+++. ++.....+|.-.+ ++...+. ...+......|.. +.+.+..+....++..++ .-++| ++..+..+..+
T Consensus 245 ~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~L 323 (353)
T PF00930_consen 245 PDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCL 323 (353)
T ss_dssp TTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEES
T ss_pred CCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEec
Confidence 4444 4445556666554 4544444 3455545566655 556744455556666533 44444 55522334444
Q ss_pred cccccceEEEEEccCCCEEEEeec
Q psy3639 80 RGHSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 80 ~~~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
.........+.|||++++++..+.
T Consensus 324 T~~~~~~~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 324 TCEDGDHYSASFSPDGKYYVDTYS 347 (353)
T ss_dssp STTSSTTEEEEE-TTSSEEEEEEE
T ss_pred cCCCCCceEEEECCCCCEEEEEEc
Confidence 433332268999999998876543
No 449
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=82.83 E-value=10 Score=24.35 Aligned_cols=96 Identities=10% Similarity=0.132 Sum_probs=49.1
Q ss_pred ceEcCCCCEEEeee-----------cCC-eEEEeeCCC--Ce--eeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEE
Q psy3639 4 PRVTSSPQRCLTGS-----------YDR-TCKLWDIKS--GH--EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKL 67 (113)
Q Consensus 4 ~~~~~~~~~~~~~~-----------~d~-~v~i~~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~ 67 (113)
+++.++++++++.. ..+ .|.+++-.. ++ ....+.........+++. +++ +++ +......++
T Consensus 19 ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~-~~G-lyV-~~~~~i~~~ 95 (367)
T TIGR02604 19 VCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVA-VGG-VYV-ATPPDILFL 95 (367)
T ss_pred eeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEe-cCC-EEE-eCCCeEEEE
Confidence 46788888777642 223 566665332 22 223443333445778887 556 444 344333333
Q ss_pred EeCCcc-----c--cc-eeeccc----ccceEEEEEccCCCEEEEee
Q psy3639 68 WASAKE-----E--CI-QTYRGH----SAEVVGVTFSPDQSTFCSCS 102 (113)
Q Consensus 68 wd~~~~-----~--~~-~~~~~~----~~~v~~~~~~~~~~~~~~~~ 102 (113)
.|.... + .+ ..+... ......+.|.|+|.+.++.+
T Consensus 96 ~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 96 RDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred eCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 344211 1 11 122221 23466899999998766544
No 450
>KOG3616|consensus
Probab=82.70 E-value=8.4 Score=27.79 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=25.8
Q ss_pred CCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc
Q psy3639 40 QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 73 (113)
Q Consensus 40 ~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~ 73 (113)
...++.+.-+ |.+..++.+..||.+++|+....
T Consensus 14 ~e~~~aiqsh-p~~~s~v~~~~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 14 DEFTTAIQSH-PGGQSFVLAHQDGSIILFNFIPR 46 (1636)
T ss_pred cceeeeeeec-CCCceEEEEecCCcEEEEeeccc
Confidence 3456677666 77899999999999999986443
No 451
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=82.64 E-value=15 Score=26.27 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=47.0
Q ss_pred CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceee----cc---------------cccceEEEEEccCCCEEEEe
Q psy3639 41 NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY----RG---------------HSAEVVGVTFSPDQSTFCSC 101 (113)
Q Consensus 41 ~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~----~~---------------~~~~v~~~~~~~~~~~~~~~ 101 (113)
..|.++... ..+..++....||+|.++|..+.+.+... .. .......++|||.+..++.-
T Consensus 260 ~~V~si~~~-~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~ 338 (753)
T PF11635_consen 260 KRVVSITSP-ELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI 338 (753)
T ss_pred CeEEEEEec-ccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence 456677766 66778899999999999998776443322 00 01133458899999988888
Q ss_pred ecCCcEE
Q psy3639 102 SMDHTAR 108 (113)
Q Consensus 102 ~~~~~i~ 108 (113)
..++.+.
T Consensus 339 ~~~~~~~ 345 (753)
T PF11635_consen 339 DEDGKTK 345 (753)
T ss_pred ecCCCce
Confidence 8888754
No 452
>KOG2247|consensus
Probab=82.27 E-value=0.1 Score=34.45 Aligned_cols=101 Identities=15% Similarity=0.182 Sum_probs=58.0
Q ss_pred EcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCC-EEEEEeCCCcEEEEeCCccccce-eecc-c
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGD-KILTGSFDKTLKLWASAKEECIQ-TYRG-H 82 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~v~~wd~~~~~~~~-~~~~-~ 82 (113)
+-+.+.-++.++-+..+..||-. ++...... .+....+++|. ..+. .++.+-..+.+.+||+.+...-. .+.+ +
T Consensus 42 w~~e~~nlavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wD-kegdvlavlAek~~piylwd~n~eytqqLE~gg~~ 118 (615)
T KOG2247|consen 42 WRPEGHNLAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWD-KEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTS 118 (615)
T ss_pred EecCCCceehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhc-cccchhhhhhhcCCCeeechhhhhhHHHHhccCcc
Confidence 45555557777777777778754 33332322 34455677777 4444 44566678899999986643211 1111 1
Q ss_pred ccceEEEEEccCCCEEEEeecCCcEEEee
Q psy3639 83 SAEVVGVTFSPDQSTFCSCSMDHTARIFN 111 (113)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 111 (113)
.... ..|++.+..++.+...|.+.+++
T Consensus 119 s~sl--l~wsKg~~el~ig~~~gn~viyn 145 (615)
T KOG2247|consen 119 SKSL--LAWSKGTPELVIGNNAGNIVIYN 145 (615)
T ss_pred hHHH--HhhccCCccccccccccceEEEe
Confidence 1122 56676666666666666666664
No 453
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=82.24 E-value=9.7 Score=23.71 Aligned_cols=72 Identities=14% Similarity=0.183 Sum_probs=44.3
Q ss_pred CCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEe------CCCcEEEEeCCccccceeecc-----cccceE
Q psy3639 19 DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS------FDKTLKLWASAKEECIQTYRG-----HSAEVV 87 (113)
Q Consensus 19 d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------~~~~v~~wd~~~~~~~~~~~~-----~~~~v~ 87 (113)
-..+++||....+=...-.+-.+.|..+.|. .+.++++.|. ....+..||..+... ..+.. ..+++.
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~-~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgpv~ 92 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWA-SNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGPVT 92 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEe-cCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCcEE
Confidence 3558999987544332333456789999998 6667777765 234577888876643 12221 235676
Q ss_pred EEEEc
Q psy3639 88 GVTFS 92 (113)
Q Consensus 88 ~~~~~ 92 (113)
.+.+.
T Consensus 93 a~~~~ 97 (281)
T PF12768_consen 93 ALTFI 97 (281)
T ss_pred EEEee
Confidence 66663
No 454
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=81.65 E-value=16 Score=25.99 Aligned_cols=59 Identities=12% Similarity=0.118 Sum_probs=41.6
Q ss_pred CCEEEEEeCCCcEEEEeCCcc--------------------ccceeecccccceEEEEEc--cCCCEEEEeecCCcEEEe
Q psy3639 53 GDKILTGSFDKTLKLWASAKE--------------------ECIQTYRGHSAEVVGVTFS--PDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 53 ~~~~~~~~~~~~v~~wd~~~~--------------------~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~i~~~ 110 (113)
.+.|+.+..||.|.+|..++- ++...+. -....+.++++ ...+++|+++....|.||
T Consensus 114 ~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 114 EEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred eeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 457889999999999964210 0112222 24578999998 778888888888888887
Q ss_pred ec
Q psy3639 111 NT 112 (113)
Q Consensus 111 ~~ 112 (113)
..
T Consensus 193 af 194 (717)
T PF08728_consen 193 AF 194 (717)
T ss_pred EE
Confidence 53
No 455
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=81.56 E-value=2.9 Score=17.19 Aligned_cols=20 Identities=25% Similarity=0.381 Sum_probs=14.7
Q ss_pred CCEEEEEeCCCcEEEEeCCc
Q psy3639 53 GDKILTGSFDKTLKLWASAK 72 (113)
Q Consensus 53 ~~~~~~~~~~~~v~~wd~~~ 72 (113)
+..++.++.||.+..+|.++
T Consensus 21 ~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT-
T ss_pred CCEEEEEcCCCEEEEEeCCC
Confidence 56788888899999888753
No 456
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=81.54 E-value=6.8 Score=21.51 Aligned_cols=64 Identities=17% Similarity=0.066 Sum_probs=45.0
Q ss_pred EEEeeecCCeEEEeeCCCCeeeEEeeCCCC-eEEE-----------EEEcCCCCCEEEEEeCCCcEEEEeCCccccc
Q psy3639 12 RCLTGSYDRTCKLWDIKSGHEICTYRGHQN-VVYA-----------VAFSEPYGDKILTGSFDKTLKLWASAKEECI 76 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~-~v~~-----------~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~ 76 (113)
+.+....||.+.+++..+++.+..+....+ .+.. -... .+..+.++...||.+.+-|..++..+
T Consensus 43 l~f~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~-~~~Pf~L~r~~dGrltL~Dp~Tg~~i 118 (135)
T TIGR03054 43 LVFEDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVA-AEPPFRLTRYDNGRLTLTDPATGWSI 118 (135)
T ss_pred EEEecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCC-CCCCEEEEEEeCCcEEEEcCCCCcEE
Confidence 455677899999999999999888853322 2210 1122 45667788899999999998888644
No 457
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=81.42 E-value=8.3 Score=28.25 Aligned_cols=92 Identities=13% Similarity=0.270 Sum_probs=50.5
Q ss_pred ecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEE--------EEeCCCcEEEE----eCCccccceee-----
Q psy3639 17 SYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKIL--------TGSFDKTLKLW----ASAKEECIQTY----- 79 (113)
Q Consensus 17 ~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------~~~~~~~v~~w----d~~~~~~~~~~----- 79 (113)
+.|..+.+||...+...+.+......|..+++-.|..+.++ .+.. ..+.++ |-++++ +..+
T Consensus 99 T~dnkLiLWnynn~neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vAT~-~e~~ilgvs~d~~T~E-ls~fnTgl~ 176 (1263)
T COG5308 99 TNDNKLILWNYNNSNEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVATE-KEVMILGVSKDTKTGE-LSLFNTGLV 176 (1263)
T ss_pred EcCCEEEEEecCCCcchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhhhh-heeeEEEEEeccccce-eEEEecceE
Confidence 34678889999877766666555555666655434333222 2221 233333 223332 1111
Q ss_pred -cccccceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 80 -RGHSAEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 80 -~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...+-.|.++.-+.+|+.+++|..| +.+|.+
T Consensus 177 vsvqGinV~civs~e~GrIFf~g~~d--~nvyEl 208 (1263)
T COG5308 177 VSVQGINVRCIVSEEDGRIFFGGEND--PNVYEL 208 (1263)
T ss_pred EeccCceeEEEEeccCCcEEEecCCC--CCeEEE
Confidence 1223456777766789988888777 555543
No 458
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=81.17 E-value=19 Score=26.41 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=47.8
Q ss_pred CCeEEEeeCCCCeeeEEe-eCCCCeEEEEEEcCCCCCEEEE-EeCCC-----cEEEEeCCcc-ccceeecccccceEEEE
Q psy3639 19 DRTCKLWDIKSGHEICTY-RGHQNVVYAVAFSEPYGDKILT-GSFDK-----TLKLWASAKE-ECIQTYRGHSAEVVGVT 90 (113)
Q Consensus 19 d~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~-~~~~~-----~v~~wd~~~~-~~~~~~~~~~~~v~~~~ 90 (113)
.+.+.+-|....... .+ ..+..++..-+|+ |+|+.++- .+..+ .|.+-|+.+. ..+-.+...+..|..-.
T Consensus 328 ~~~L~~~D~dG~n~~-~ve~~~~~~i~sP~~S-PDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwr 405 (912)
T TIGR02171 328 TGNLAYIDYTKGASR-AVEIEDTISVYHPDIS-PDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWR 405 (912)
T ss_pred CCeEEEEecCCCCce-EEEecCCCceecCcCC-CCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceE
Confidence 346777776533333 33 3367888999999 77887765 34333 3777787654 23344444455555555
Q ss_pred EccCCCEEEE
Q psy3639 91 FSPDQSTFCS 100 (113)
Q Consensus 91 ~~~~~~~~~~ 100 (113)
..++|...++
T Consensus 406 v~e~gdt~iv 415 (912)
T TIGR02171 406 VLENGDTVIV 415 (912)
T ss_pred ecCCCCeEEE
Confidence 5666665543
No 459
>PHA02790 Kelch-like protein; Provisional
Probab=80.78 E-value=14 Score=24.72 Aligned_cols=62 Identities=11% Similarity=0.132 Sum_probs=30.7
Q ss_pred CCCEEEeeecCC-----eEEEeeCCCCee--eEEeeCCCCeEEEEEEcCCCCCEEEEEeCC--CcEEEEeCCcc
Q psy3639 9 SPQRCLTGSYDR-----TCKLWDIKSGHE--ICTYRGHQNVVYAVAFSEPYGDKILTGSFD--KTLKLWASAKE 73 (113)
Q Consensus 9 ~~~~~~~~~~d~-----~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~v~~wd~~~~ 73 (113)
++.++++|+.++ .+..||..++.- +..+........... .++...+.|+.+ ..+..||..+.
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~---~~~~iYviGG~~~~~sve~ydp~~n 341 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP---ANNKLYVVGGLPNPTSVERWFHGDA 341 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE---ECCEEEEECCcCCCCceEEEECCCC
Confidence 345667777542 455677765431 111111111111222 336666777653 35777887654
No 460
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=80.14 E-value=13 Score=23.80 Aligned_cols=70 Identities=14% Similarity=0.123 Sum_probs=41.3
Q ss_pred EEEeeecCCeEEEeeCCCCeeeEEeeCCC--CeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccc
Q psy3639 12 RCLTGSYDRTCKLWDIKSGHEICTYRGHQ--NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS 83 (113)
Q Consensus 12 ~~~~~~~d~~v~i~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~ 83 (113)
.+..+..+|.+.-.|..++..+....... ..+..-..- .+++ ++.++.++.+..+|.++++.+.......
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~-~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~ 141 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILG-SDGK-IYVGSWDGKLYALDASTGTLVWSRNVGG 141 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEE-eCCe-EEEecccceEEEEECCCCcEEEEEecCC
Confidence 34445667777778888777554332111 112222222 2343 6778888888888988887776666444
No 461
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=79.34 E-value=11 Score=23.89 Aligned_cols=55 Identities=13% Similarity=0.110 Sum_probs=33.1
Q ss_pred CEEEEEeCCCcEEEEeCCccccce---e-ecccccceEEEEEccCCCEEEEeecCCcEE
Q psy3639 54 DKILTGSFDKTLKLWASAKEECIQ---T-YRGHSAEVVGVTFSPDQSTFCSCSMDHTAR 108 (113)
Q Consensus 54 ~~~~~~~~~~~v~~wd~~~~~~~~---~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~ 108 (113)
.+++.....+.|....+.....+. . +.....++..+++.|||.++++.+.+|.|+
T Consensus 272 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 272 DLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 345555445566666665332221 1 222334788999999999888888888874
No 462
>KOG2280|consensus
Probab=79.30 E-value=18 Score=25.92 Aligned_cols=81 Identities=11% Similarity=0.187 Sum_probs=0.0
Q ss_pred eEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccce---eecccccceEEEEEccCCCE
Q psy3639 21 TCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQ---TYRGHSAEVVGVTFSPDQST 97 (113)
Q Consensus 21 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~ 97 (113)
.|+||+.. |..+..+.-....+..+.|+ ..+.++....+|++++|++.....-. -.......|....+..+|-.
T Consensus 65 ~I~If~~s-G~lL~~~~w~~~~lI~mgWs--~~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVa 141 (829)
T KOG2280|consen 65 YIRIFNIS-GQLLGRILWKHGELIGMGWS--DDEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVA 141 (829)
T ss_pred eEEEEecc-ccchHHHHhcCCCeeeeccc--CCceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceE
Q ss_pred EEEeecC
Q psy3639 98 FCSCSMD 104 (113)
Q Consensus 98 ~~~~~~~ 104 (113)
+.+.+.+
T Consensus 142 vlt~~g~ 148 (829)
T KOG2280|consen 142 VLTVSGQ 148 (829)
T ss_pred EEecCCc
No 463
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=79.14 E-value=14 Score=23.52 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=61.0
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeC--CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccc---cceeecccc
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRG--HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE---CIQTYRGHS 83 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~---~~~~~~~~~ 83 (113)
.++++..+.++.-+++.|+.+......+.. ...-..++..+ |++...+..+.-+.+.|+.+.. ....+....
T Consensus 95 se~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vs---Gn~aYVadlddgfLivdvsdpssP~lagrya~~~ 171 (370)
T COG5276 95 SEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVS---GNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPG 171 (370)
T ss_pred cccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEec---CCEEEEeeccCcEEEEECCCCCCceeeeeeccCC
Confidence 456666777777789999876543322211 22334555555 7888777756556678876543 222333333
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
...+.++. .|++..++..|+.+.+.|+
T Consensus 172 ~d~~~v~I--SGn~AYvA~~d~GL~ivDV 198 (370)
T COG5276 172 GDTHDVAI--SGNYAYVAWRDGGLTIVDV 198 (370)
T ss_pred CCceeEEE--ecCeEEEEEeCCCeEEEEc
Confidence 44456666 4778888888888888775
No 464
>KOG1898|consensus
Probab=78.53 E-value=26 Score=26.33 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=18.1
Q ss_pred EEEcCCCCCEEEEEeCCCcEEEEeCCcccccee
Q psy3639 46 VAFSEPYGDKILTGSFDKTLKLWASAKEECIQT 78 (113)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~ 78 (113)
.+++|-.+ .+.+| ....+++||+...+.++.
T Consensus 939 ~Ai~~f~~-~~Lag-vG~~l~~YdlG~K~lLRk 969 (1205)
T KOG1898|consen 939 GAICPFQG-RVLAG-VGRFLRLYDLGKKKLLRK 969 (1205)
T ss_pred eEEeccCC-EEEEe-cccEEEEeeCChHHHHhh
Confidence 34453334 44443 336899999977665443
No 465
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=78.40 E-value=15 Score=23.59 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=34.2
Q ss_pred eEEEEEEcCCCCCEEEEEeCC-------------------CcEEEEeCCccccceeecccccceEEEEEccCCCEEEEee
Q psy3639 42 VVYAVAFSEPYGDKILTGSFD-------------------KTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCS 102 (113)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~~~-------------------~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 102 (113)
....+.+. +++.+.++-+.. |.+.-++...++ +..+.......+.++|+|+|+.+++-.
T Consensus 125 ~~~~l~~g-pDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 125 SLNSLAWG-PDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGK-LRVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred cccCceEC-CCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCe-EEEEecCcCCCccceECCCCCEEEEcc
Confidence 36688888 667665544421 334445554433 233332223446899999998876644
Q ss_pred c
Q psy3639 103 M 103 (113)
Q Consensus 103 ~ 103 (113)
.
T Consensus 203 ~ 203 (367)
T TIGR02604 203 D 203 (367)
T ss_pred C
Confidence 3
No 466
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=78.03 E-value=12 Score=22.73 Aligned_cols=80 Identities=14% Similarity=0.148 Sum_probs=39.3
Q ss_pred EEeeCCCCeeeEEeeC-CCCeEEEEEEcCCCCCEEEEEeCC---CcEEEEeCCc----cccce---eecccccceEEEEE
Q psy3639 23 KLWDIKSGHEICTYRG-HQNVVYAVAFSEPYGDKILTGSFD---KTLKLWASAK----EECIQ---TYRGHSAEVVGVTF 91 (113)
Q Consensus 23 ~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~---~~v~~wd~~~----~~~~~---~~~~~~~~v~~~~~ 91 (113)
.+||+.+++.. .+.. ....+..-.+- ++|+++.+|+.. ..+++++... ..... .+. ....=....-
T Consensus 49 ~~yD~~tn~~r-pl~v~td~FCSgg~~L-~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~-~~RWYpT~~~ 125 (243)
T PF07250_consen 49 VEYDPNTNTFR-PLTVQTDTFCSGGAFL-PDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQ-SGRWYPTATT 125 (243)
T ss_pred EEEecCCCcEE-eccCCCCCcccCcCCC-CCCCEEEeCCCCccccceEEEecCCCCCCCCceECccccc-CCCccccceE
Confidence 36777665432 2221 22222333344 778888877662 3578887644 11111 111 1111112333
Q ss_pred ccCCCEEEEeecCC
Q psy3639 92 SPDQSTFCSCSMDH 105 (113)
Q Consensus 92 ~~~~~~~~~~~~~~ 105 (113)
-|||+.++.|+...
T Consensus 126 L~DG~vlIvGG~~~ 139 (243)
T PF07250_consen 126 LPDGRVLIVGGSNN 139 (243)
T ss_pred CCCCCEEEEeCcCC
Confidence 46899888887653
No 467
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=77.72 E-value=13 Score=22.54 Aligned_cols=100 Identities=11% Similarity=0.005 Sum_probs=54.4
Q ss_pred ceEcCCCCEEEeeecCCeEEEee-CCCCeee-EEeeC--CCCeEEEEEEcCCCCCEEEEEe---CCCcEEEEeCC---cc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWD-IKSGHEI-CTYRG--HQNVVYAVAFSEPYGDKILTGS---FDKTLKLWASA---KE 73 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~-~~~~~~~-~~~~~--~~~~v~~~~~~~~~~~~~~~~~---~~~~v~~wd~~---~~ 73 (113)
..|++++...+....+...+++. ..++... ..... ....|..++++ ++|..++... .++.+.+=-+. .+
T Consensus 71 PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vS-pDG~RvA~v~~~~~~~~v~va~V~r~~~g 149 (253)
T PF10647_consen 71 PSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVS-PDGTRVAVVVEDGGGGRVYVAGVVRDGDG 149 (253)
T ss_pred ccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEEC-CCCcEEEEEEecCCCCeEEEEEEEeCCCC
Confidence 35667766555555555555553 2333221 11211 11289999999 7787665544 24556554332 12
Q ss_pred ------ccceeecccccceEEEEEccCCCEEEEeecC
Q psy3639 74 ------ECIQTYRGHSAEVVGVTFSPDQSTFCSCSMD 104 (113)
Q Consensus 74 ------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 104 (113)
..+.........+..+.|.+++.+++.+...
T Consensus 150 ~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~ 186 (253)
T PF10647_consen 150 VPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSA 186 (253)
T ss_pred CcceeccceEecccccCcceeeeecCCCEEEEEeCCC
Confidence 1112222234578899999988876665443
No 468
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=76.56 E-value=19 Score=26.47 Aligned_cols=50 Identities=14% Similarity=0.085 Sum_probs=31.3
Q ss_pred CcEEEEeCCccccceeecccccceEEEEEccCCCEEEE-eecCC-----cEEEeec
Q psy3639 63 KTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCS-CSMDH-----TARIFNT 112 (113)
Q Consensus 63 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~-----~i~~~~~ 112 (113)
+.+.+-|.........-..+..++.+-+|||||+.++- .+..+ .|++-|+
T Consensus 329 ~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L 384 (912)
T TIGR02171 329 GNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNL 384 (912)
T ss_pred CeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEeh
Confidence 46666666554433331335678888999999999875 33333 3666555
No 469
>KOG1983|consensus
Probab=76.09 E-value=30 Score=25.85 Aligned_cols=26 Identities=8% Similarity=0.066 Sum_probs=22.9
Q ss_pred cceEcCCCCEEEeeecCCeEEEeeCC
Q psy3639 3 VPRVTSSPQRCLTGSYDRTCKLWDIK 28 (113)
Q Consensus 3 ~~~~~~~~~~~~~~~~d~~v~i~~~~ 28 (113)
..+++|..++++.+...|.+.+|-..
T Consensus 40 ~~afD~~q~llai~t~tg~i~~yg~~ 65 (993)
T KOG1983|consen 40 ALAFDPTQGLLAIGTRTGAIKIYGQP 65 (993)
T ss_pred ceeeccccceEEEEEecccEEEeccc
Confidence 46789999999999999999999765
No 470
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=75.77 E-value=18 Score=23.08 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=44.1
Q ss_pred eEEEEEEcCCCCCEEEEEeCCCcEEEEeCC------cccc-ceeecc-----cccceEEEEEccCC------------CE
Q psy3639 42 VVYAVAFSEPYGDKILTGSFDKTLKLWASA------KEEC-IQTYRG-----HSAEVVGVTFSPDQ------------ST 97 (113)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~------~~~~-~~~~~~-----~~~~v~~~~~~~~~------------~~ 97 (113)
.-..++++ |.+...++....+...+||.. ..+. +-++.. .......+.|+... ..
T Consensus 24 N~WGia~~-p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 24 NAWGLSYR-PGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred ccceeEec-CCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 45789999 667888888888999999985 1111 222221 11234455555322 23
Q ss_pred EEEeecCCcEEEee
Q psy3639 98 FCSCSMDHTARIFN 111 (113)
Q Consensus 98 ~~~~~~~~~i~~~~ 111 (113)
++.+++||+|.-|.
T Consensus 103 Fif~tEdGTisaW~ 116 (336)
T TIGR03118 103 FLFVTEDGTLSGWA 116 (336)
T ss_pred EEEEeCCceEEeec
Confidence 67889999999886
No 471
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=72.78 E-value=21 Score=22.45 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=27.6
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCC
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGH 39 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~ 39 (113)
....+|++|+++-.-..|.+.+..+++.+..+.+.
T Consensus 150 ~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 150 DKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred eecCCccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence 44567788988888888999998888888777554
No 472
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=72.54 E-value=22 Score=22.54 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=39.6
Q ss_pred EEEEEcCCCCCEEEEEeCC------CcEEEEeCCccccceee---------------cccccceEEEEEccCCCEEEEee
Q psy3639 44 YAVAFSEPYGDKILTGSFD------KTLKLWASAKEECIQTY---------------RGHSAEVVGVTFSPDQSTFCSCS 102 (113)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~------~~v~~wd~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~~ 102 (113)
-.+++ ++++.++++.-.+ ..|..++.. ++....+ ...+....+++++|+|+.|+++.
T Consensus 88 Egi~~-~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~ 165 (326)
T PF13449_consen 88 EGIAV-PPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM 165 (326)
T ss_pred hHeEE-ecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence 46777 4778888887777 788888865 4332222 11345678999999999776654
Q ss_pred c
Q psy3639 103 M 103 (113)
Q Consensus 103 ~ 103 (113)
+
T Consensus 166 E 166 (326)
T PF13449_consen 166 E 166 (326)
T ss_pred C
Confidence 4
No 473
>KOG2377|consensus
Probab=70.26 E-value=32 Score=23.50 Aligned_cols=96 Identities=6% Similarity=0.120 Sum_probs=60.8
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCCeee----EEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-cccee
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSGHEI----CTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQT 78 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~ 78 (113)
+.|+++.+.+++--.+.+|-+++....+.. ++.+.....|....|. .+ .-++.....| +-+|.+... ..++.
T Consensus 72 IkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~-~s-~e~A~i~~~G-~e~y~v~pekrslRl 148 (657)
T KOG2377|consen 72 IKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWT-SS-TEIAFITDQG-IEFYQVLPEKRSLRL 148 (657)
T ss_pred EEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEe-cC-eeEEEEecCC-eEEEEEchhhhhhhh
Confidence 578999999999888999999887433322 2233345668899998 43 3333333333 566655443 34555
Q ss_pred ecccccceEEEEEccCCCEEEEee
Q psy3639 79 YRGHSAEVVGVTFSPDQSTFCSCS 102 (113)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~~~ 102 (113)
.+.++..|.=..|+++.+.++-++
T Consensus 149 Vks~~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 149 VKSHNLNVNWYMYCPETAVILLST 172 (657)
T ss_pred hhhcccCccEEEEccccceEeeec
Confidence 555666677778888777654443
No 474
>KOG1900|consensus
Probab=70.19 E-value=48 Score=25.58 Aligned_cols=70 Identities=10% Similarity=0.188 Sum_probs=48.0
Q ss_pred CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeC----Ccc---c-----------------cceeec-ccccceEEEEEcc
Q psy3639 39 HQNVVYAVAFSEPYGDKILTGSFDKTLKLWAS----AKE---E-----------------CIQTYR-GHSAEVVGVTFSP 93 (113)
Q Consensus 39 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~----~~~---~-----------------~~~~~~-~~~~~v~~~~~~~ 93 (113)
....|.++... .+|+.+.+|-.+ .+|.+ .++ + .+.++. .+..+|..+....
T Consensus 177 dg~~V~~I~~t-~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~ 252 (1311)
T KOG1900|consen 177 DGVSVNCITYT-ENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN 252 (1311)
T ss_pred CCceEEEEEec-cCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecc
Confidence 45668888855 788888777655 44542 111 0 012222 3456899999988
Q ss_pred CCCEEEEeecCCcEEEeec
Q psy3639 94 DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 94 ~~~~~~~~~~~~~i~~~~~ 112 (113)
..+.+.+-++.+++.+||+
T Consensus 253 SR~IlY~lsek~~v~~Y~i 271 (1311)
T KOG1900|consen 253 SRNILYVLSEKGTVSAYDI 271 (1311)
T ss_pred ccceeeeeccCceEEEEEc
Confidence 8888899999999999986
No 475
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=69.87 E-value=12 Score=18.71 Aligned_cols=49 Identities=10% Similarity=0.112 Sum_probs=28.0
Q ss_pred CeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q psy3639 20 RTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASA 71 (113)
Q Consensus 20 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~ 71 (113)
+.|..||..+ .+.....-.....|..+|......++....+.|++|+.+
T Consensus 36 ~~Vvyyd~~~---~~~va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 36 GNVVYYDGKE---VKVVASGFSFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred ceEEEEeCCE---eEEeeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 4455666432 222222334457888884444455566667889998754
No 476
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=69.00 E-value=30 Score=22.71 Aligned_cols=29 Identities=14% Similarity=0.397 Sum_probs=22.9
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEeec
Q psy3639 84 AEVVGVTFSPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (113)
..+..+...+..+.+++.+.++.|.+|++
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l 218 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDL 218 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEE
Confidence 34888888888888999999999999987
No 477
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=68.34 E-value=34 Score=23.08 Aligned_cols=61 Identities=7% Similarity=-0.003 Sum_probs=29.1
Q ss_pred CeEEEEEEcCCCCCEEE-EEeCCCcEEEEeCCccc---cceeec----------------ccccceEEEEEccCCCEEEE
Q psy3639 41 NVVYAVAFSEPYGDKIL-TGSFDKTLKLWASAKEE---CIQTYR----------------GHSAEVVGVTFSPDQSTFCS 100 (113)
Q Consensus 41 ~~v~~~~~~~~~~~~~~-~~~~~~~v~~wd~~~~~---~~~~~~----------------~~~~~v~~~~~~~~~~~~~~ 100 (113)
..+++|.++ .+.++|. +.-..|.++.||+.... ...+.. ...+...-++.|.||+.+.+
T Consensus 312 ~LitDI~iS-lDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYv 390 (461)
T PF05694_consen 312 PLITDILIS-LDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYV 390 (461)
T ss_dssp -----EEE--TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEE
T ss_pred CceEeEEEc-cCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEE
Confidence 457999999 6667665 55558999999987632 111111 01123366788888888765
Q ss_pred ee
Q psy3639 101 CS 102 (113)
Q Consensus 101 ~~ 102 (113)
.+
T Consensus 391 Tn 392 (461)
T PF05694_consen 391 TN 392 (461)
T ss_dssp E-
T ss_pred Ee
Confidence 43
No 478
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=67.38 E-value=1.3 Score=16.31 Aligned_cols=8 Identities=63% Similarity=0.895 Sum_probs=5.4
Q ss_pred EEccCCCE
Q psy3639 90 TFSPDQST 97 (113)
Q Consensus 90 ~~~~~~~~ 97 (113)
.|||+|+.
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 36777765
No 479
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=66.44 E-value=20 Score=19.78 Aligned_cols=60 Identities=5% Similarity=0.085 Sum_probs=34.4
Q ss_pred CCCCEEEEEeCCCcEEEEeCCccc--------cceeecccccceEEEE---Ecc--CCCEEEEeecCCcEEEeec
Q psy3639 51 PYGDKILTGSFDKTLKLWASAKEE--------CIQTYRGHSAEVVGVT---FSP--DQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 51 ~~~~~~~~~~~~~~v~~wd~~~~~--------~~~~~~~~~~~v~~~~---~~~--~~~~~~~~~~~~~i~~~~~ 112 (113)
.....++.++..|+|.+++..... .+..+. .+..|.+++ +.| ....|+.|+ ...+..||+
T Consensus 8 G~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt-~t~llaYDV 80 (136)
T PF14781_consen 8 GVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDV 80 (136)
T ss_pred CCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEc
Confidence 445577777888899999865432 233333 345555554 332 234455554 456777775
No 480
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=66.42 E-value=28 Score=21.49 Aligned_cols=71 Identities=10% Similarity=0.042 Sum_probs=43.4
Q ss_pred CCeEEEEEEcC------CCCCEEEEEeCCCcEEEEeCCccccceeecccccceE---EEEEccCCCEEEEeecCCcEEEe
Q psy3639 40 QNVVYAVAFSE------PYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVV---GVTFSPDQSTFCSCSMDHTARIF 110 (113)
Q Consensus 40 ~~~v~~~~~~~------~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~~~~~~~~~i~~~ 110 (113)
...|+|+.--. ..-..++.|.++|.|.+.|.+....+.+..-..-++. .-.|..-.-.+++++.||.|++.
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 34566665431 1235799999999999999887766666654433332 11232112246778889988764
No 481
>PF13964 Kelch_6: Kelch motif
Probab=64.29 E-value=11 Score=16.13 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=14.6
Q ss_pred eEcCCCCEEEeeecCC------eEEEeeCCC
Q psy3639 5 RVTSSPQRCLTGSYDR------TCKLWDIKS 29 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~------~v~i~~~~~ 29 (113)
+...++++++.|+.+. .+.+||..+
T Consensus 7 ~v~~~~~iyv~GG~~~~~~~~~~v~~yd~~t 37 (50)
T PF13964_consen 7 AVVVGGKIYVFGGYDNSGKYSNDVERYDPET 37 (50)
T ss_pred EEEECCEEEEECCCCCCCCccccEEEEcCCC
Confidence 3455667777777654 344555544
No 482
>KOG2467|consensus
Probab=64.29 E-value=7.3 Score=25.43 Aligned_cols=20 Identities=5% Similarity=0.047 Sum_probs=17.8
Q ss_pred CCCEEEEeecCCcEEEeecC
Q psy3639 94 DQSTFCSCSMDHTARIFNTM 113 (113)
Q Consensus 94 ~~~~~~~~~~~~~i~~~~~~ 113 (113)
.|-.+++++.|+++.+||++
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr 359 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLR 359 (477)
T ss_pred cCceEecCCccceEEEEecc
Confidence 46689999999999999985
No 483
>KOG2377|consensus
Probab=64.19 E-value=44 Score=22.89 Aligned_cols=57 Identities=12% Similarity=0.237 Sum_probs=41.6
Q ss_pred CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcccc----ceeecccccceEEEEEccCCC
Q psy3639 39 HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEEC----IQTYRGHSAEVVGVTFSPDQS 96 (113)
Q Consensus 39 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~ 96 (113)
..++|.+++|+ ++.+.++.--.+.+|.+++....+. ..+.+..+..|..+.|+.+..
T Consensus 65 d~G~I~SIkFS-lDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e 125 (657)
T KOG2377|consen 65 DKGEIKSIKFS-LDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTE 125 (657)
T ss_pred CCCceeEEEec-cCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCee
Confidence 45689999999 8899999999999999998744332 223344455678888876543
No 484
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=63.14 E-value=11 Score=15.54 Aligned_cols=21 Identities=5% Similarity=0.121 Sum_probs=17.6
Q ss_pred ceEEEEEccCCCEEEEeecCC
Q psy3639 85 EVVGVTFSPDQSTFCSCSMDH 105 (113)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~ 105 (113)
....++..++|+..+++..++
T Consensus 14 ~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 14 YGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eEEEEEECCCCCEEEEEeecC
Confidence 467899999999988887765
No 485
>KOG1897|consensus
Probab=63.10 E-value=63 Score=24.33 Aligned_cols=61 Identities=15% Similarity=0.252 Sum_probs=46.7
Q ss_pred CCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCc
Q psy3639 9 SPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK 72 (113)
Q Consensus 9 ~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~ 72 (113)
+|+++| +-+..|++|+..+.+.++.-..+..++..+.+. ..+..++.|..-+.+.+...+.
T Consensus 839 ngkllA--~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~-v~gdeI~VgDlm~Sitll~y~~ 899 (1096)
T KOG1897|consen 839 NGKLLA--GINQSVRLYEWTTERELRIECNISNPIIALDLQ-VKGDEIAVGDLMRSITLLQYKG 899 (1096)
T ss_pred CCeEEE--ecCcEEEEEEccccceehhhhcccCCeEEEEEE-ecCcEEEEeeccceEEEEEEec
Confidence 455554 345679999998887777777788888888888 7789999999988877755443
No 486
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=62.43 E-value=14 Score=16.77 Aligned_cols=15 Identities=13% Similarity=0.189 Sum_probs=7.6
Q ss_pred EEEEEccCCCEEEEe
Q psy3639 87 VGVTFSPDQSTFCSC 101 (113)
Q Consensus 87 ~~~~~~~~~~~~~~~ 101 (113)
++++..|+|+.++.+
T Consensus 4 ~~~~~q~DGkIlv~G 18 (55)
T TIGR02608 4 YAVAVQSDGKILVAG 18 (55)
T ss_pred EEEEECCCCcEEEEE
Confidence 344555555555544
No 487
>PRK13684 Ycf48-like protein; Provisional
Probab=61.63 E-value=39 Score=21.52 Aligned_cols=97 Identities=5% Similarity=0.014 Sum_probs=47.1
Q ss_pred EcCCCCEEEeeecCCeEEEeeC-CCCeeeEEee-CCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeec---
Q psy3639 6 VTSSPQRCLTGSYDRTCKLWDI-KSGHEICTYR-GHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR--- 80 (113)
Q Consensus 6 ~~~~~~~~~~~~~d~~v~i~~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~--- 80 (113)
+.+++.+++++ ..|.+.. .. ..++...... .....+..+.+. +++..++.+ ..|.+++=....+..-....
T Consensus 180 ~~~~g~~v~~g-~~G~i~~-s~~~gg~tW~~~~~~~~~~l~~i~~~-~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~ 255 (334)
T PRK13684 180 RSPDGKYVAVS-SRGNFYS-TWEPGQTAWTPHQRNSSRRLQSMGFQ-PDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPE 255 (334)
T ss_pred ECCCCeEEEEe-CCceEEE-EcCCCCCeEEEeeCCCcccceeeeEc-CCCCEEEEe-cCCEEEEccCCCCCccccccCCc
Confidence 44555555444 3454432 22 2223333332 234567888888 556665554 55766432223332111111
Q ss_pred -ccccceEEEEEccCCCEEEEeecCCcE
Q psy3639 81 -GHSAEVVGVTFSPDQSTFCSCSMDHTA 107 (113)
Q Consensus 81 -~~~~~v~~~~~~~~~~~~~~~~~~~~i 107 (113)
.....+..+.+.+++..++++ .+|.+
T Consensus 256 ~~~~~~l~~v~~~~~~~~~~~G-~~G~v 282 (334)
T PRK13684 256 ITNGYGYLDLAYRTPGEIWAGG-GNGTL 282 (334)
T ss_pred cccccceeeEEEcCCCCEEEEc-CCCeE
Confidence 122346778888877755444 45544
No 488
>KOG1983|consensus
Probab=61.54 E-value=40 Score=25.28 Aligned_cols=21 Identities=29% Similarity=0.376 Sum_probs=19.1
Q ss_pred ccCCCEEEEeecCCcEEEeec
Q psy3639 92 SPDQSTFCSCSMDHTARIFNT 112 (113)
Q Consensus 92 ~~~~~~~~~~~~~~~i~~~~~ 112 (113)
++++..++++..||.+.+||.
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~ 263 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDV 263 (993)
T ss_pred ccCCceEEEEEecCCEEeeec
Confidence 677999999999999999986
No 489
>PRK10115 protease 2; Provisional
Probab=60.72 E-value=59 Score=23.23 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=35.9
Q ss_pred eEEEEEEcCCCCCEEEEEe-CCC----cEEEEeCCccccceeecccccceEEEEEccCCCEEEEeec
Q psy3639 42 VVYAVAFSEPYGDKILTGS-FDK----TLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 42 ~v~~~~~~~~~~~~~~~~~-~~~----~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
.+..+.++ +++++++.+. .+| .+++.|+.+++.+...-... . ..++|.++++.|+....
T Consensus 128 ~l~~~~~S-pdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~-~-~~~~w~~D~~~~~y~~~ 191 (686)
T PRK10115 128 TLGGMAIT-PDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV-E-PSFVWANDSWTFYYVRK 191 (686)
T ss_pred EEeEEEEC-CCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc-c-eEEEEeeCCCEEEEEEe
Confidence 36677888 6777665443 333 47788888775432221111 1 45899999987765543
No 490
>KOG1520|consensus
Probab=56.55 E-value=16 Score=23.82 Aligned_cols=43 Identities=16% Similarity=0.105 Sum_probs=25.7
Q ss_pred EeCCCcEEEEeCCccccceeecccccceEEEEEccCCCEEEEee
Q psy3639 59 GSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSPDQSTFCSCS 102 (113)
Q Consensus 59 ~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 102 (113)
+..+|.+.-||..+... ..+...-.-.+.++.||++.+++++-
T Consensus 195 g~~~GRl~~YD~~tK~~-~VLld~L~F~NGlaLS~d~sfvl~~E 237 (376)
T KOG1520|consen 195 GDPTGRLFRYDPSTKVT-KVLLDGLYFPNGLALSPDGSFVLVAE 237 (376)
T ss_pred CCCccceEEecCcccch-hhhhhcccccccccCCCCCCEEEEEe
Confidence 33467777777665542 22221222346789999999887653
No 491
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=56.26 E-value=32 Score=18.71 Aligned_cols=21 Identities=19% Similarity=0.417 Sum_probs=15.6
Q ss_pred eCCCcEEEEeCCccccceeec
Q psy3639 60 SFDKTLKLWASAKEECIQTYR 80 (113)
Q Consensus 60 ~~~~~v~~wd~~~~~~~~~~~ 80 (113)
...|.|++.|..+...+..+.
T Consensus 48 ~seG~V~l~D~~t~~~ias~~ 68 (125)
T cd01211 48 NIEGTVKLIDAQSNKVIASFS 68 (125)
T ss_pred CCCceEEEEcCCCCcEEEEEE
Confidence 456889999988876665554
No 492
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=56.09 E-value=47 Score=20.60 Aligned_cols=56 Identities=11% Similarity=0.005 Sum_probs=34.2
Q ss_pred CEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcC---CCCCEEEEEeCCCcEEE
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSE---PYGDKILTGSFDKTLKL 67 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~v~~ 67 (113)
.-++.|.+++.|.+.|......+..+.-..-++ .+...- .-...++.++.||.|.+
T Consensus 196 scLViGTE~~~i~iLd~~af~il~~~~lpsvPv-~i~~~G~~devdyRI~Va~Rdg~iy~ 254 (257)
T PF14779_consen 196 SCLVIGTESGEIYILDPQAFTILKQVQLPSVPV-FISVSGQYDEVDYRIVVACRDGKIYT 254 (257)
T ss_pred ceEEEEecCCeEEEECchhheeEEEEecCCCce-EEEEEeeeeccceEEEEEeCCCEEEE
Confidence 468899999999999987766666655333333 222220 01234566666776654
No 493
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []. This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A ....
Probab=54.83 E-value=17 Score=15.14 Aligned_cols=16 Identities=25% Similarity=0.410 Sum_probs=10.3
Q ss_pred eEcCCCCEEEeeecCC
Q psy3639 5 RVTSSPQRCLTGSYDR 20 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~ 20 (113)
+...++++++.|+.++
T Consensus 7 ~~~~~~~iyv~GG~~~ 22 (47)
T PF01344_consen 7 AVVVGNKIYVIGGYDG 22 (47)
T ss_dssp EEEETTEEEEEEEBES
T ss_pred EEEECCEEEEEeeecc
Confidence 3445667777777765
No 494
>PF12904 Collagen_bind_2: Putative collagen-binding domain of a collagenase ; InterPro: IPR024749 This domain is likely to be the collagen-binding domain of a family of bacterial collagenase enzymes. The structure of one family member, Q8A905 from SWISSPROT, has been characterised. The domain occurs in the C-terminal region of the protein.; PDB: 3KZS_D.
Probab=54.07 E-value=29 Score=17.71 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=21.9
Q ss_pred CEEEeeecCCeEEEeeCCCCeeeE-EeeCCCC-eEEEEEEcCCCCCEEEEEe
Q psy3639 11 QRCLTGSYDRTCKLWDIKSGHEIC-TYRGHQN-VVYAVAFSEPYGDKILTGS 60 (113)
Q Consensus 11 ~~~~~~~~d~~v~i~~~~~~~~~~-~~~~~~~-~v~~~~~~~~~~~~~~~~~ 60 (113)
+.+++.+.| .+.+|... ++.+. .+..-.+ .+..-=|+|.+|.....+.
T Consensus 17 ~~~Atr~~d-y~~VY~~~-Gr~~~vdl~~l~g~~~~a~WfdPR~G~~~~~g~ 66 (93)
T PF12904_consen 17 RIVATRGKD-YALVYTPT-GRPFTVDLSKLSGKKVKAWWFDPRTGKYTYIGE 66 (93)
T ss_dssp --EEEE-SS-EEEEEESS----EEEEGGGSS-SEEEEEEEETTT-BEEEEEE
T ss_pred eEEEEcCCC-EEEEECCC-CCEEEEEcccccCCceeEEEEcCCCCCEEEeee
Confidence 456777777 78888654 44432 2332232 3333334666666655543
No 495
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=53.95 E-value=77 Score=22.47 Aligned_cols=67 Identities=7% Similarity=0.068 Sum_probs=38.7
Q ss_pred ceEcCCCCEEEeeecCCeEEEeeCCCC--eeeEEeeCCCCeEEEEEEcCCCCCEEEEE-eCCCcEEEEeCCc
Q psy3639 4 PRVTSSPQRCLTGSYDRTCKLWDIKSG--HEICTYRGHQNVVYAVAFSEPYGDKILTG-SFDKTLKLWASAK 72 (113)
Q Consensus 4 ~~~~~~~~~~~~~~~d~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~v~~wd~~~ 72 (113)
+-|+|....+++-.....-.++++... +....+ ...+.|.|.+|. .+|+.++.+ +..=.-++||-..
T Consensus 118 CVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT-~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 118 CVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWT-KDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred ccccCCCceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEec-CcCCEEEEEeCCeEEEEEecCch
Confidence 346777776665444333234555432 222334 366789999999 677665544 4334567787533
No 496
>KOG1896|consensus
Probab=51.21 E-value=1.2e+02 Score=23.73 Aligned_cols=90 Identities=14% Similarity=0.174 Sum_probs=43.6
Q ss_pred CeEEEeeCCC-CeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCcc-ccceeeccc--ccceEEEEEccCC
Q psy3639 20 RTCKLWDIKS-GHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE-ECIQTYRGH--SAEVVGVTFSPDQ 95 (113)
Q Consensus 20 ~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~-~~~~~~~~~--~~~v~~~~~~~~~ 95 (113)
.+|.+|+++. ...+..-. ..-++.-.... .-.+++..|.--..+.+.-.+.. ..+..+... .-.+.+..|--+|
T Consensus 1116 qKI~v~~l~r~~~ligVaF-iD~~~yv~s~~-~vknlIl~gDV~ksisfl~fqeep~rlsL~srd~~~l~v~s~EFLVdg 1193 (1366)
T KOG1896|consen 1116 QKIIVRKLDRDSELIGVAF-IDLPLYVHSMK-VVKNLILAGDVMKSISFLGFQEEPYRLSLLSRDFEPLNVYSTEFLVDG 1193 (1366)
T ss_pred cEEEEEEeccCCcceeeEE-eccceeEEehh-hhhhheehhhhhhceEEEEEccCceEEEEeecCCchhhceeeeeEEcC
Confidence 4688888843 33322111 11122222222 22455566665555555433322 112222211 2245666666666
Q ss_pred C--EEEEeecCCcEEEee
Q psy3639 96 S--TFCSCSMDHTARIFN 111 (113)
Q Consensus 96 ~--~~~~~~~~~~i~~~~ 111 (113)
. .++++..++.|+++-
T Consensus 1194 ~~L~flvsDa~rNi~vy~ 1211 (1366)
T KOG1896|consen 1194 SNLSFLVSDADRNIHVYM 1211 (1366)
T ss_pred CeeEEEEEcCCCcEEEEE
Confidence 5 467888888888873
No 497
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=51.06 E-value=65 Score=20.77 Aligned_cols=75 Identities=11% Similarity=0.127 Sum_probs=47.9
Q ss_pred cCCeEEEeeCCCCeeeEEeeC--CCCeEEEEEEcC-----CCCCEEEEEeCCCcEEEEeCCccccceeecccc------c
Q psy3639 18 YDRTCKLWDIKSGHEICTYRG--HQNVVYAVAFSE-----PYGDKILTGSFDKTLKLWASAKEECIQTYRGHS------A 84 (113)
Q Consensus 18 ~d~~v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~-----~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~------~ 84 (113)
.-|.|-+||.. +..++.+.. .-..-..++..| ..+.+|+---.||+|..||..+++.+-.+.... .
T Consensus 220 G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~ 298 (336)
T TIGR03118 220 GLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVD 298 (336)
T ss_pred CcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEec
Confidence 34688889875 777776642 222334555543 335566655569999999999888766665332 3
Q ss_pred ceEEEEEcc
Q psy3639 85 EVVGVTFSP 93 (113)
Q Consensus 85 ~v~~~~~~~ 93 (113)
..+.+.|-.
T Consensus 299 GLWgL~fGn 307 (336)
T TIGR03118 299 GLWSLTFGN 307 (336)
T ss_pred CeEEeeeCC
Confidence 457787754
No 498
>KOG3611|consensus
Probab=50.78 E-value=96 Score=22.63 Aligned_cols=56 Identities=9% Similarity=0.074 Sum_probs=33.9
Q ss_pred CEEEeeecCCeEE-EeeCCCCe-----eeEEee--CCCCeEEEEEEcCCCCCEEEEEeCCCcEEE
Q psy3639 11 QRCLTGSYDRTCK-LWDIKSGH-----EICTYR--GHQNVVYAVAFSEPYGDKILTGSFDKTLKL 67 (113)
Q Consensus 11 ~~~~~~~~d~~v~-i~~~~~~~-----~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~ 67 (113)
..+..|+++|+|. +-...... .+.+++ .+..+|..+.++ +....|+.++..|-+++
T Consensus 426 dVlflGTd~G~vlKvV~~~~~~~~~~~llEElqvf~~~~pI~~m~Ls-~~~~~LyVgs~~gV~qv 489 (737)
T KOG3611|consen 426 DVLFLGTDAGTVLKVVSPGKESGKSNVLLEELQVFPDAEPIRSMQLS-SKRGSLYVGSRSGVVQV 489 (737)
T ss_pred EEEEEecCCCeEEEEEecCCccCccceeEEEEeecCCCCceeEEEec-ccCCeEEEEccCcEEEe
Confidence 4566788888864 33332211 222222 255789999999 44556777777775554
No 499
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=50.65 E-value=78 Score=21.56 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=45.5
Q ss_pred eeeEEeeC--CCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccceeecccccceEEEEEcc--CCCEEEEeecCCc
Q psy3639 31 HEICTYRG--HQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVVGVTFSP--DQSTFCSCSMDHT 106 (113)
Q Consensus 31 ~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~ 106 (113)
..+..+.+ ....+..+.|. .+-.++++--+-..+.+.|+...+.-+.+...+-+=.+--.+| .++.+-+|-.+|.
T Consensus 416 nvvGkltGl~~gERIYAvRf~-gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen~~lGvG~~~g~ 494 (603)
T COG4880 416 NVVGKLTGLAPGERIYAVRFV-GDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGENRLLGVGAYQGG 494 (603)
T ss_pred cEEEEEeccCCCceEEEEEEe-CceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCchhhccccCCCcEEEeecccCC
Confidence 33444443 45678888887 6566677777766788888876554333322111112223455 4555666666665
Q ss_pred E--EEeec
Q psy3639 107 A--RIFNT 112 (113)
Q Consensus 107 i--~~~~~ 112 (113)
+ .+||+
T Consensus 495 vKiSLFdi 502 (603)
T COG4880 495 VKISLFDI 502 (603)
T ss_pred ceEEEEec
Confidence 4 44553
No 500
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=50.41 E-value=65 Score=20.56 Aligned_cols=97 Identities=11% Similarity=0.041 Sum_probs=49.4
Q ss_pred eEcCCCCEEEeeecCCeEEEeeCCCCeeeEEeeCCCCeEEEEEEcCCCCCEEEEEeCCCcEEEEeCCccccc-eee--cc
Q psy3639 5 RVTSSPQRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECI-QTY--RG 81 (113)
Q Consensus 5 ~~~~~~~~~~~~~~d~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~wd~~~~~~~-~~~--~~ 81 (113)
+.+++|..-.++...+.+---|..+++....--+....-..+..- +++...++-+.. .|.-.|.++.+.. +.+ +.
T Consensus 68 apapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~g-pdg~~Witd~~~-aI~R~dpkt~evt~f~lp~~~ 145 (353)
T COG4257 68 APAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVG-PDGSAWITDTGL-AIGRLDPKTLEVTRFPLPLEH 145 (353)
T ss_pred ccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEEC-CCCCeeEecCcc-eeEEecCcccceEEeeccccc
Confidence 344455444455545555555656665444333334444556666 555544443333 4444555554311 111 11
Q ss_pred cccceEEEEEccCCCEEEEeec
Q psy3639 82 HSAEVVGVTFSPDQSTFCSCSM 103 (113)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~~~~ 103 (113)
-........|.+.|+..+++..
T Consensus 146 a~~nlet~vfD~~G~lWFt~q~ 167 (353)
T COG4257 146 ADANLETAVFDPWGNLWFTGQI 167 (353)
T ss_pred CCCcccceeeCCCccEEEeecc
Confidence 2335567788888888777653
Done!