RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3640
(616 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 175 bits (444), Expect = 1e-50
Identities = 90/361 (24%), Positives = 148/361 (40%), Gaps = 48/361 (13%)
Query: 253 KLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 312
K W + E GH++ V V F P +++ S D T+K+W + +T +GH
Sbjct: 1 KEWIPR-PPEKYALSGHRSPVTRVIFH-PVFSVMVSASEDATIKVWDYETGDFERTLKGH 58
Query: 313 SAEVT---FSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLIT 369
+ V F SCS D T ++++ + + T+ H V S+ + + +++
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118
Query: 370 GSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSS 429
S D +I +W++Q + + TGH + + N ++IAS S
Sbjct: 119 ASRDKTIKMWEVQ----------------TGYCVKTFTGHREWVRMVRPNQDGTLIASCS 162
Query: 430 LDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQ 489
D T ++W V T C L+ H V I++ S + + + +
Sbjct: 163 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKK---------- 212
Query: 490 TFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSF 549
G L + S D+T K+W V L T GH N V V F
Sbjct: 213 ----------------SGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLF 255
Query: 550 HPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCI 609
H GK +LS + D T R+W ++ C++ L AHE V S F+ ++T S D T +
Sbjct: 256 HSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315
Query: 610 W 610
W
Sbjct: 316 W 316
Score = 167 bits (424), Expect = 1e-47
Identities = 71/304 (23%), Positives = 121/304 (39%), Gaps = 7/304 (2%)
Query: 183 LKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG 242
L H P+T + F + ++ S D T K+WD ++G T +GH + V ++F
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 243 CLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK 302
L G E + + P GD I++ S DKT+K+W
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 303 EECIQTYRGHSAE---VTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQ 359
C++T+ GH V + D + SCS D T R++ + + L+ H V +
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECIS 192
Query: 360 FSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYR----ASHKPIHILTGHSQEISN 415
++ + + S + + + T + ++ + L GH +
Sbjct: 193 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 252
Query: 416 CLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQT 475
LF+ I S + D T ++WD + C TL HE V + F + + T S DQT
Sbjct: 253 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 312
Query: 476 ANLW 479
+W
Sbjct: 313 VKVW 316
Score = 127 bits (320), Expect = 2e-33
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 23/229 (10%)
Query: 175 QRYEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYA 234
Q +E + + H +++++ G ++ S D+T K+W++++G+ + T+ GH+ V
Sbjct: 89 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 148
Query: 235 VAFSEPYGCL-TGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAF--------------- 278
V ++ + + S D+T ++W + + R H++VV +++
Sbjct: 149 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS 208
Query: 279 ----SEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVT---FSPDQSTFCSCSMD 331
S G +L+GS DKT+K+W + C+ T GH V F SC+ D
Sbjct: 209 ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 268
Query: 332 HTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWD 380
T R+++ + + M TL AH V SL F ++TGS D ++ VW+
Sbjct: 269 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 94.0 bits (232), Expect = 9e-22
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 5/214 (2%)
Query: 401 KPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAF 460
+ L+GH ++ +F+ S++ S+S D T K+WD T TLK H D V DI+F
Sbjct: 8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF 67
Query: 461 DYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQ 520
D+SG + +A++ + + V ++ +G + +AS D+
Sbjct: 68 DHSGKL----LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK 123
Query: 521 TAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLK 580
T K+W V ++TF GH V V + G L+ S S D T R+W + EC L+
Sbjct: 124 TIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 182
Query: 581 AHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMN 614
H V + + +
Sbjct: 183 EHRHVVECISWAPESSYSSISEATGSETKKSGKP 216
Score = 68.2 bits (165), Expect = 5e-13
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 523 KLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAH 582
K W GH + V++V FHP +++S S+D T ++W E+G+ + LK H
Sbjct: 1 KEWIPRP--PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGH 58
Query: 583 EDDVFSCGFNYNGDTIITASKDNTCCIWRSMN 614
D V F+++G + + S D T +W
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQG 90
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 149 bits (376), Expect = 1e-40
Identities = 67/313 (21%), Positives = 127/313 (40%), Gaps = 21/313 (6%)
Query: 302 KEECIQTYRGHSAEVT---FSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISL 358
+ +T RGH A++ + D S S D I+++ + ++H + + V++
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 359 QFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLF 418
++ N + G D+ +++++ + G E + +Q +++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG- 162
Query: 419 NFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANL 478
D T LWD+ T T H +V+ ++ + + D +A L
Sbjct: 163 ------------DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 479 WTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKL-WTVGGAVELLQTF 537
W V QTF GH ++++ I F +G+ AT S D T +L + +
Sbjct: 211 WDVREG-MCRQTFTGHESDIN---AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266
Query: 538 YGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDT 597
++ VSF +G+L+L+G D C +W + VL H++ V G +G
Sbjct: 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA 326
Query: 598 IITASKDNTCCIW 610
+ T S D+ IW
Sbjct: 327 VATGSWDSFLKIW 339
Score = 136 bits (343), Expect = 3e-36
Identities = 55/350 (15%), Positives = 116/350 (33%), Gaps = 39/350 (11%)
Query: 155 ITQLEQSIMKLQKKLKEG-------------------FAQRYEKFKMLKSHLLPLTNITF 195
+ QL Q +L+ ++++ + + L+ HL + + +
Sbjct: 4 LDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHW 63
Query: 196 DKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLW 255
++ S D +WD + +++ + V A++ +
Sbjct: 64 GTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123
Query: 256 DIKSGHEICTYRGHQNV---VYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGH 312
E + Y ++I+T S D T LW + T+ GH
Sbjct: 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183
Query: 313 SAEVTFSPDQ---STFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLIT 369
+ +V F S + D +A++++ G T H + ++ F + N T
Sbjct: 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 370 GSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSS 429
GS D++ ++D++ + I++ F+ S ++ +
Sbjct: 244 GSDDATCRLFDLRADQ--------------ELMTYSHDNIICGITSVSFSKSGRLLLAGY 289
Query: 430 LDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLW 479
D +WD L H++ V + G +AT S D +W
Sbjct: 290 DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 120 bits (301), Expect = 1e-30
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 207 YDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG-CLTGSYDRTCKLWDIKSGHEICT 265
D TC LWDI++G + T+ GH V +++ + ++G+ D + KLWD++ G T
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Query: 266 YRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE-----VTFSP 320
+ GH++ + A+ F P G+ TGS D T +L+ ++ + TY + V+FS
Sbjct: 222 FTGHESDINAICFF-PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280
Query: 321 DQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWD 380
+ D +++ L H V L + D + TGS+DS + +W+
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 89.8 bits (221), Expect = 4e-20
Identities = 48/222 (21%), Positives = 82/222 (36%), Gaps = 2/222 (0%)
Query: 393 ESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHE 452
+ R + L GH +I + + ++ S+S DG +WD T + +
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRS 97
Query: 453 DEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSK 512
V+ A+ SG+ +A D +++ + +
Sbjct: 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG--NVRVSRELAGHTGYLSCCRFLDDN 155
Query: 513 LATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTES 572
SS T + TF GH+ +V +S P +L +SG+ D + +LW
Sbjct: 156 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 215
Query: 573 GECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMN 614
G C Q HE D+ + F NG+ T S D TC ++
Sbjct: 216 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
Score = 69.8 bits (169), Expect = 2e-13
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 168 KLKEGFAQRYEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRG 227
+L + A + + + +T+++F K G L G D C +WD G
Sbjct: 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 228 HQNVVYAVAFSEPYGCL--TGSYDRTCKLWD 256
H N V + + G TGS+D K+W+
Sbjct: 311 HDNRVSCLGVT-DDGMAVATGSWDSFLKIWN 340
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 142 bits (357), Expect = 3e-38
Identities = 60/336 (17%), Positives = 119/336 (35%), Gaps = 35/336 (10%)
Query: 298 WASAKEECIQTYRGHSAEVT--FSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPV 355
W + + + +GH V + S S D+T ++++ +G+ + TL HTG V
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 356 ISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTG------- 408
S Q + + + + + T + + +++G
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 409 -------------HSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEV 455
+ + + S + D K+WD T C +TL+ H + V
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 180
Query: 456 LDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLAT 515
+ FD G + + S D + +W V + T GH + S + + L +
Sbjct: 181 YSLQFD--GIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTS-----GMELKDNILVS 232
Query: 516 ASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGEC 575
++D T K+W + L + ++ + V++ S D T +LW ++GE
Sbjct: 233 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEF 292
Query: 576 IQVLKA-----HEDDVFSCGFNYNGDTIITASKDNT 606
I+ L V+ + S++ T
Sbjct: 293 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328
Score = 137 bits (344), Expect = 2e-36
Identities = 73/356 (20%), Positives = 128/356 (35%), Gaps = 33/356 (9%)
Query: 214 WDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVV 273
W +GH + V ++GS D T K+W +G + T GH V
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 274 YAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHT 333
++ + T A E Y S + S S D T
Sbjct: 61 WSSQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 118
Query: 334 ARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAE 393
R+++ +GQ +H L H V D +++G++D + VWD +
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDPET---------- 166
Query: 394 STYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHED 453
+H L GH+ F + S SLD + ++WDV T C +TL H+
Sbjct: 167 ------ETCLHTLQGHTN--RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 218
Query: 454 EVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKL 513
+ + L + ++D T +W + L + ++ + ++ + +
Sbjct: 219 LTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA---VTCLQFNKNFV 273
Query: 514 ATASSDQTAKLWTVGGAVELLQTFY-----GHSNEVSKVSFHPTGKLVLSGSQDTT 564
T+S D T KLW + E ++ G V ++ T + GS++ T
Sbjct: 274 ITSSDDGTVKLWDLKTG-EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328
Score = 125 bits (314), Expect = 2e-32
Identities = 74/346 (21%), Positives = 134/346 (38%), Gaps = 66/346 (19%)
Query: 176 RYEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAV 235
+ K+LK H + G R ++GS D T K+W +G + T GH V++
Sbjct: 5 ELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 63
Query: 236 AFSE---------------------------------------PYGCLTGSYDRTCKLWD 256
+ ++GS D T ++WD
Sbjct: 64 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 123
Query: 257 IKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHS-AE 315
I++G + GH AV + G ++++G++D +K+W E C+ T +GH+
Sbjct: 124 IETGQCLHVLMGHVA---AVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 180
Query: 316 VTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSS 375
+ D S S+D + R+++ +G +HTL H ++ N+L++G+ DS+
Sbjct: 181 YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADST 238
Query: 376 IVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAK 435
+ +WDI+ + + + + F+ + + +SS DGT K
Sbjct: 239 VKIWDIKTG---------------QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK 283
Query: 436 LWDVRTMCCFYTLKN-----HEDEVLDIAFDYSGSKLATASSDQTA 476
LWD++T L V I + A S + T
Sbjct: 284 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE 329
Score = 80.2 bits (196), Expect = 6e-17
Identities = 46/214 (21%), Positives = 76/214 (35%), Gaps = 14/214 (6%)
Query: 397 RASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVL 456
R K +L GH + C F + I S S D T K+W T C TL H V
Sbjct: 3 RGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW 61
Query: 457 DIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATA 516
+ + H+ ++ +
Sbjct: 62 SSQMRDNIIISGSTDRTLKVWNAE--------TGECIHTLYGHTSTVRCMHLHEKRVVSG 113
Query: 517 SSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECI 576
S D T ++W + + L GH V G+ V+SG+ D ++W E+ C+
Sbjct: 114 SRDATLRVWDIETG-QCLHVLMGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDPETETCL 170
Query: 577 QVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIW 610
L+ H + V+S F+ G +++ S D + +W
Sbjct: 171 HTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVW 202
Score = 65.2 bits (157), Expect = 5e-12
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Query: 529 GAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFS 588
G ++ + GH + V G ++SGS D T ++WS +G+C++ L H V+S
Sbjct: 4 GELKSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 62
Query: 589 CGFNYNGDTIITASKDNTCCIWRSMN 614
N + + +
Sbjct: 63 SQMRDNIIISGSTDRTLKVWNAETGE 88
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 138 bits (346), Expect = 3e-36
Identities = 86/395 (21%), Positives = 142/395 (35%), Gaps = 69/395 (17%)
Query: 244 LTGSYDRTCKLWDIKSGH----EICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWA 299
L + L++ E+ H +VV V FS G+ + TG +KT +++
Sbjct: 32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFS-NDGEYLATGC-NKTTQVYR 89
Query: 300 SAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQ 359
+ + SA + +T + + + S+
Sbjct: 90 VSDGSLVARLSDDSAANKDPENLNT---------------------SSSPSSDLYIRSVC 128
Query: 360 FSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFN 419
FS D L TG+ D I +WDI+ K + IL GH Q+I + +
Sbjct: 129 FSPDGKFLATGAEDRLIRIWDIEN----------------RKIVMILQGHEQDIYSLDYF 172
Query: 420 FSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLW 479
S + S S D T ++WD+RT C TL + G +A S D+ +W
Sbjct: 173 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 232
Query: 480 TVGGAV------ELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVEL 533
++ GH + V + F G + + S D++ KLW + A
Sbjct: 233 DSETGFLVERLDSENESGTGHKDSVY---SVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 289
Query: 534 -----------LQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAH 582
T+ GH + V V+ + +LSGS+D W +SG + +L+ H
Sbjct: 290 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH 349
Query: 583 EDDVFSCG------FNYNGDTIITASKDNTCCIWR 611
+ V S + T S D IW+
Sbjct: 350 RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 120 bits (301), Expect = 3e-30
Identities = 62/331 (18%), Positives = 120/331 (36%), Gaps = 41/331 (12%)
Query: 186 HLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRG------------------ 227
H + + F G TG ++T +++ + G +
Sbjct: 61 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119
Query: 228 HQNVVYAVAFSEPYG--CLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDK 285
+ +V FS P G TG+ DR ++WDI++ + +GH+ +Y++ +
Sbjct: 120 SDLYIRSVCFS-PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178
Query: 286 ILTGSFD--KTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQ 343
+ + L + G + D + S+D R++++ +G
Sbjct: 179 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 344 EMHTLK-------AHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTY 396
+ L H V S+ F+ D +++GS D S+ +W++Q N ++S
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ----NANNKSDSKT 294
Query: 397 RASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVL 456
S GH + + ++ I S S D WD ++ L+ H + V+
Sbjct: 295 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 354
Query: 457 DIA------FDYSGSKLATASSDQTANLWTV 481
+A + AT S D A +W
Sbjct: 355 SVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 64.8 bits (156), Expect = 8e-12
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 191 TNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSE-----PYGCL- 244
++ + L+GS DR WD KSG+ + +GH+N V +VA + P +
Sbjct: 312 LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVF 371
Query: 245 -TGSYDRTCKLWDIK 258
TGS D ++W K
Sbjct: 372 ATGSGDCKARIWKYK 386
Score = 47.1 bits (110), Expect = 4e-06
Identities = 40/220 (18%), Positives = 74/220 (33%), Gaps = 37/220 (16%)
Query: 402 PIHILTGHSQEISNCLFNF---SNSMIASSSLDGTAKLWDVRTMCCFY----TLKNHEDE 454
P + HS+ I L + S + L++ +H
Sbjct: 5 PYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSV 64
Query: 455 VLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLA 514
V + F G LAT ++T ++ V L+ S ++
Sbjct: 65 VCCVKFSNDGEYLATGC-NKTTQVYRVSD-GSLVARLSDDSAANKDPENLNT-------- 114
Query: 515 TASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGE 574
+ + V F P GK + +G++D R+W E+ +
Sbjct: 115 --------------------SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK 154
Query: 575 CIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMN 614
+ +L+ HE D++S + +GD +++ S D T IW
Sbjct: 155 IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 194
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 111 bits (276), Expect = 9e-28
Identities = 57/311 (18%), Positives = 104/311 (33%), Gaps = 33/311 (10%)
Query: 178 EKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAF 237
++ + + +D + ++G D T K+WD + GH V + +
Sbjct: 6 QRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 238 SEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKL 297
E S + V++ + S
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123
Query: 298 WASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVIS 357
+ +A D S S D T +++NT++ + + TL H +
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 183
Query: 358 LQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCL 417
LQ+ ++++GS D++I +WDI+ + +L GH +
Sbjct: 184 LQYRD--RLVVSGSSDNTIRLWDIE----------------CGACLRVLEGHEE--LVRC 223
Query: 418 FNFSNSMIASSSLDGTAKLWDVRTM---------CCFYTLKNHEDEVLDIAFDYSGSKLA 468
F N I S + DG K+WD+ C TL H V + FD ++
Sbjct: 224 IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIV 281
Query: 469 TASSDQTANLW 479
++S D T +W
Sbjct: 282 SSSHDDTILIW 292
Score = 104 bits (259), Expect = 2e-25
Identities = 60/316 (18%), Positives = 105/316 (33%), Gaps = 37/316 (11%)
Query: 261 HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSP 320
I VY + + KI++G D T+K+W EC + GH+ V
Sbjct: 6 QRIHCRSETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 321 DQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWD 380
+ + EM H + ++ M+ SI VWD
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR-SIAVWD 121
Query: 381 IQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVR 440
+ + + +F + I S+S D T K+W+
Sbjct: 122 MASP---------------TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTS 166
Query: 441 TMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSK 500
T TL H+ + + + + + SSD T LW + L E +
Sbjct: 167 TCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACL------RVLEGHE 218
Query: 501 VLDIAFDYSGSKLATASSDQTAKLWTVGGAVE--------LLQTFYGHSNEVSKVSFHPT 552
L + ++ + + D K+W + A++ L+T HS V ++ F
Sbjct: 219 ELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-- 276
Query: 553 GKLVLSGSQDTTCRLW 568
++S S D T +W
Sbjct: 277 EFQIVSSSHDDTILIW 292
Score = 99.5 bits (246), Expect = 1e-23
Identities = 61/320 (19%), Positives = 109/320 (34%), Gaps = 46/320 (14%)
Query: 304 ECIQTYRGHSAEVT-FSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSS 362
+ I S V D S D+T +I++ N+ + L HTG V+ LQ+
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
Query: 363 DRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSN 422
+ + + + T + E+ ++T
Sbjct: 66 RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD----------- 114
Query: 423 SMIASSSLDGTAKLWDVRTM---CCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLW 479
+ +WD+ + L H V + FD + +AS D+T +W
Sbjct: 115 ---------RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVW 163
Query: 480 TVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYG 539
E ++T GH ++ Y + + SSD T +LW + L
Sbjct: 164 NTSTC-EFVRTLNGHKRGIAC-----LQYRDRLVVSGSSDNTIRLWDIECGACL---RVL 214
Query: 540 HSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGE---------CIQVLKAHEDDVFSCG 590
+E K ++SG+ D ++W + C++ L H VF
Sbjct: 215 EGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 274
Query: 591 FNYNGDTIITASKDNTCCIW 610
F+ I+++S D+T IW
Sbjct: 275 FD--EFQIVSSSHDDTILIW 292
Score = 75.7 bits (184), Expect = 1e-15
Identities = 42/214 (19%), Positives = 83/214 (38%), Gaps = 12/214 (5%)
Query: 397 RASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVL 456
R S + IH + S+ + CL + + I S D T K+WD T+ C L H VL
Sbjct: 2 RHSLQRIHCRSETSKGV-YCL-QYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL 59
Query: 457 DIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATA 516
+ +D ++ S G ++ + ++ + T
Sbjct: 60 CLQYDERVIITGSSDSTVRVWDVNTG--------EMLNTLIHHCEAVLHLRFNNGMMVTC 111
Query: 517 SSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECI 576
S D++ +W + ++ + + K ++S S D T ++W+T + E +
Sbjct: 112 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV 171
Query: 577 QVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIW 610
+ L H+ + + +++ S DNT +W
Sbjct: 172 RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 203
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 110 bits (275), Expect = 4e-27
Identities = 27/364 (7%), Positives = 73/364 (20%), Gaps = 32/364 (8%)
Query: 232 VYAVAFSEPYG-CLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGS 290
+A FS G + + D+ + + + V
Sbjct: 5 KFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRG-GDTKVAFIHG 61
Query: 291 FD--KTLKLWASAKEECIQTYRGHSAEVT---FSPDQSTFCSCSMDHTARIFNTNSGQEM 345
L ++ + + + + V + + + +G+
Sbjct: 62 TREGDFLGIYDYRTGK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT 120
Query: 346 HTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHI 405
++ + S + + G + A Y + I
Sbjct: 121 VIERSREAMITDFTISDNSRFIAYGF-------PLKHGETDGYVMQAIHVYDMEGRKIFA 173
Query: 406 LTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTM-------CCFYTLKNHEDEVLDI 458
T + F+ + + S D + + +
Sbjct: 174 ATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPT 233
Query: 459 AFDYSGSKLATASSDQTA---NLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLAT 515
D + + + + +
Sbjct: 234 KLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQG 293
Query: 516 ASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGEC 575
A + V + N ++ + K V+ D + E E
Sbjct: 294 APEKGVLLKYDVKT-----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348
Query: 576 IQVL 579
+ +
Sbjct: 349 ERTV 352
Score = 100 bits (248), Expect = 1e-23
Identities = 27/355 (7%), Positives = 73/355 (20%), Gaps = 23/355 (6%)
Query: 273 VYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE-VTFSPDQSTFCSCSMD 331
+A FS GD I S + + + ++ V D
Sbjct: 5 KFAEDFSPLDGDLIAFVSRGQ-AFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTR 63
Query: 332 HTARIFNTN-SGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNA 390
+ + + + + G V ++ + + +
Sbjct: 64 EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND------RFEIMTVDLETG 117
Query: 391 YAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKN 450
R+ I T + ++D+ F
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177
Query: 451 HEDEVLDIAFDYSGSKLATASSDQTANLW------TVGGAVELLQTFYGHSNEVSKV--- 501
+ AFD L S V +
Sbjct: 178 NSH-DYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLV 236
Query: 502 LDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQ 561
+G +++ + G ++ S +
Sbjct: 237 PRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPE 296
Query: 562 DTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMNRD 616
+ ++ + + ++++ + + T++ D + +
Sbjct: 297 KGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347
Score = 78.4 bits (191), Expect = 3e-16
Identities = 14/194 (7%), Positives = 41/194 (21%), Gaps = 22/194 (11%)
Query: 206 SYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSG----- 260
+ ++D++ + + ++ SY D
Sbjct: 156 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 215
Query: 261 --HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLW-------ASAKEECIQTYRG 311
+ P G +D I
Sbjct: 216 VVSKPFVIPLIPGSPNPTKLV-PRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES 274
Query: 312 HSAEVT---FSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLI 368
+ + + ++ + + + + L+ S+DR ++
Sbjct: 275 SILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTVM 330
Query: 369 TGSFDSSIVVWDIQ 382
D I + ++
Sbjct: 331 VRKDDGKIYTFPLE 344
Score = 73.7 bits (179), Expect = 9e-15
Identities = 16/174 (9%), Positives = 33/174 (18%), Gaps = 17/174 (9%)
Query: 198 FGTRCLTGSYDRTCKLWDIKSG-------HEICTYRGHQNVVYAVAFS-EPYGCLTGSYD 249
SY D + G YD
Sbjct: 189 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYD 248
Query: 250 RTCKLW-------DIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAK 302
D I + + L +
Sbjct: 249 LNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG-EFAAYYQGAPEKGVLLKYDVKT 307
Query: 303 EECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVI 356
+ + + + ++ S D+ T D F ++ T++ P++
Sbjct: 308 RK-VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360
Score = 32.5 bits (72), Expect = 0.12
Identities = 4/44 (9%), Positives = 13/44 (29%)
Query: 181 KMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICT 224
+ + LT++ + D + ++ + T
Sbjct: 308 RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERT 351
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 108 bits (268), Expect = 3e-26
Identities = 36/339 (10%), Positives = 102/339 (30%), Gaps = 25/339 (7%)
Query: 178 EKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYR---GHQNVVYA 234
+ ++ ++ +++I + L S+D + ++ + +++ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 235 VAFSEPYGCL--TGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFD 292
F + G+ D+ ++ + + DK++ S+D
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 293 KTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSM---------DHTARIFNTNSGQ 343
+++ + F + + + F +
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181
Query: 344 EMHTLKAHTG----PVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRAS 399
+ + +G ++ S D + V Q N+ +R
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR-C 240
Query: 400 HKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIA 459
H+ T + +++ F+ + + ++ DG W+++T +E +
Sbjct: 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVK 299
Query: 460 FDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEV 498
S + L A+SD T + QT +++ +
Sbjct: 300 IACSDNILCLATSDDTFKTNAA-----IDQTIELNASSI 333
Score = 103 bits (255), Expect = 2e-24
Identities = 29/333 (8%), Positives = 85/333 (25%), Gaps = 29/333 (8%)
Query: 304 ECIQTYRGHSAEVT---FSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKA---HTGPVIS 357
+ +Q + ++ P +S S D + ++ + + L + P++
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 358 LQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCL 417
F + ++ I ++ + A + I ++
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 418 FNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTAN 477
+ A D + S+L ++
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFT--------MDTNSSRLIVGMNNSQVQ 173
Query: 478 LWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVEL---- 533
+ + + T + A +S D + +
Sbjct: 174 WFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233
Query: 534 ----------LQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHE 583
+ V+ + F P K + + D W+ ++ + I+
Sbjct: 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF- 292
Query: 584 DDVFSCGFNYNGDTIITASKDNTCCIWRSMNRD 616
++ + + + A+ D+T ++++
Sbjct: 293 NEDSVVKIACSDNILCLATSDDTFKTNAAIDQT 325
Score = 66.4 bits (160), Expect = 2e-12
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 531 VELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKA---HEDDVF 587
++++Q + +S + P+ L+L S D + ++ + L ++ +
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 588 SCGFNYNGDTIITASKDNTCCIWRSMN 614
C F N D I + +
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLI 87
Score = 50.2 bits (118), Expect = 3e-07
Identities = 20/182 (10%), Positives = 49/182 (26%), Gaps = 12/182 (6%)
Query: 442 MCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTV--GGAVELLQTFYGHSNEVS 499
M + +D + DI S S L S D + ++ L + +
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHP-- 58
Query: 500 KVLDIAF-DYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLS 558
+L F D + ++ + + G+ +N +++
Sbjct: 59 -LLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIA 117
Query: 559 GSQDTTCRLWSTESGECIQVLKAHEDDV------FSCGFNYNGDTIITASKDNTCCIWRS 612
S D + + + + + + N +I ++ +R
Sbjct: 118 ASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRL 177
Query: 613 MN 614
Sbjct: 178 PL 179
Score = 49.5 bits (116), Expect = 6e-07
Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 6/107 (5%)
Query: 175 QRYEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTY-RGHQNVVY 233
+ + + P+ +I F T D W++++ +I + + +++ V
Sbjct: 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV 298
Query: 234 AVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSE 280
+A S+ CL S D + T + + +Y + E
Sbjct: 299 KIACSDNILCLATSDD-----TFKTNAAIDQTIELNASSIYIIFDYE 340
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 108 bits (270), Expect = 4e-26
Identities = 52/405 (12%), Positives = 113/405 (27%), Gaps = 75/405 (18%)
Query: 224 TYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYR------------GHQN 271
+ H +++V+ + ++ S D K+WD K H +
Sbjct: 9 AGKAHDADIFSVSACNSF-TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 272 VVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE-------------VTF 318
V+ A+ + T SF L + +E+ + + + +
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW 127
Query: 319 SPD-----QSTFCSCSMDHTARIFNTNSGQEM------------------HTLKAHTGPV 355
+ + T I+ + + + +
Sbjct: 128 GASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA 187
Query: 356 ISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISN 415
S+ S ++ TG + ++ + ++ N ++ + + I + Q
Sbjct: 188 TSVDISER-GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246
Query: 416 CLFNFSNSMIASSSLDGTAKLW------DVRTMCCFYTLKNHEDEVLDIAFDYSGSKLAT 469
+ + SNS + + + H V+ ++F+ SG L +
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 306
Query: 470 ASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLD-IAFDYSGSKLATASSDQTAKLWTVG 528
A D W V E + T H +++ D +A D G LA L
Sbjct: 307 AGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK--- 362
Query: 529 GAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESG 573
+ + D + R + E+G
Sbjct: 363 -------------KGWRSGMGADLNESLCCVCLDRSIRWF-REAG 393
Score = 104 bits (259), Expect = 8e-25
Identities = 56/406 (13%), Positives = 117/406 (28%), Gaps = 81/406 (19%)
Query: 183 LKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYR------------GHQN 230
K+H + +++ + ++ S D K+WD K H +
Sbjct: 10 GKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 231 VVYAVAFSEPYGCL--TGSYDRTCKLWDIKSGHEICTYRGHQNV----------VYAVAF 278
V+ A+ CL T S+ + I E + +A+ +
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW 127
Query: 279 S----EPYGDKILTGSFDKTLKLW-ASAKEECIQTYRGHSAE------------------ 315
+++ T +W + + + +
Sbjct: 128 GASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA 187
Query: 316 --VTFSPDQSTFCSCSMDHTARIFNTNSGQEMH------TLKAHTGPVISLQFSSDRNML 367
V S + + T +I ++ + ++ ++ ++ + S++FS ++L
Sbjct: 188 TSVDISER-GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246
Query: 368 ITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIAS 427
+S + + S S + HS + + FN S + S
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 306
Query: 428 SSLDGTAKLWDVRTMCCFYTLKNHEDEV----LDIAFDYSGSKLATASSDQTANLWTVGG 483
+ DG + WDV+T TL H D++ +A D G LA L
Sbjct: 307 AGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR 366
Query: 484 AVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGG 529
+ L D++ + + G
Sbjct: 367 SG-------------------MGADLNESLCCVCLDRSIRWFREAG 393
Score = 59.9 bits (143), Expect = 3e-10
Identities = 13/133 (9%), Positives = 35/133 (26%), Gaps = 17/133 (12%)
Query: 493 GHSNEVSKVLDIAFDYSGSKLATASSDQTAKLW-----TVGGAVELLQTFYGHSNEVSKV 547
H ++ ++ S + S D K+W + + + H + + V
Sbjct: 12 AHDADI---FSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 548 SF-------HPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIIT 600
LV + S + + + + + D+ + +
Sbjct: 67 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126
Query: 601 ASKDNTCCIWRSM 613
N + +
Sbjct: 127 WGASNDRLLSHRL 139
Score = 50.6 bits (119), Expect = 3e-07
Identities = 14/91 (15%), Positives = 25/91 (27%), Gaps = 15/91 (16%)
Query: 539 GHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGE-----------CIQVLKAHEDDVF 587
H ++ VS +S S D ++W + + + H DV
Sbjct: 12 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 588 SCG--FNYNGDTIITASKDNTCCIWRSMNRD 616
+ + T S +R D
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITRED 100
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 106 bits (265), Expect = 9e-26
Identities = 60/358 (16%), Positives = 125/358 (34%), Gaps = 21/358 (5%)
Query: 221 EICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSE 280
+ T RGH V E +TG+ D+ +++D + + GH V+A+ ++
Sbjct: 4 QRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH 63
Query: 281 PYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFC-----SCSMDHTAR 335
G +++GS D+T+++W K C + GH++ V + S D+T
Sbjct: 64 --GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
Query: 336 IFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQ-----FGTRNA 390
++ + + + + V + G+ +
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Query: 391 YAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKN 450
A K ++IL+GH+ I + +++ S+S+D T ++WD+ YTL+
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241
Query: 451 HEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSG 510
H V + A A S + + I Y
Sbjct: 242 HTALVGLLRLSDKFLVSAAADGSIRGWDAN--------DYSRKFSYHHTNLSAITTFYVS 293
Query: 511 SKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLW 568
+ + S+ ++ + + ++++ V+F LV + +D L
Sbjct: 294 DNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLE 350
Score = 106 bits (263), Expect = 1e-25
Identities = 62/360 (17%), Positives = 126/360 (35%), Gaps = 24/360 (6%)
Query: 262 EICTYRGHQN-VVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVT--- 317
+ T RGH V+ + F + ++TG+ DK ++++ S ++ + GH V
Sbjct: 4 QRTTLRGHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK 60
Query: 318 FSPDQSTF-CSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSI 376
++ S + T + + + ++TGS D+++
Sbjct: 61 YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120
Query: 377 VVWDIQ-----YQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLD 431
VW + G + Y + P + S + +++ S S D
Sbjct: 121 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD 180
Query: 432 GTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTF 491
T +WDV M C Y L H D + +D+ + +AS D T +W + +
Sbjct: 181 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240
Query: 492 YGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHP 551
+ L F S + + Y H+N + +F+
Sbjct: 241 GHTALVGLLRLSDKFLVSA--------AADGSIRGWDANDYSRKFSYHHTNLSAITTFYV 292
Query: 552 TGKLVLSGSQDTTCRLWSTESGECIQV-LKAHEDDVFSCGFNYNGDTIITASKDNTCCIW 610
+ +++SGS + +++ SG+ + + D ++S F + KD +
Sbjct: 293 SDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLE 350
Score = 63.8 bits (153), Expect = 2e-11
Identities = 42/304 (13%), Positives = 94/304 (30%), Gaps = 9/304 (2%)
Query: 183 LKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG 242
L H + + + G ++GS DRT ++WDIK G + GH + V + E
Sbjct: 49 LSGHDGGVWALKYAH-GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 107
Query: 243 C---LTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF-DKTLKLW 298
+TGS D T +W + + + + E + +++
Sbjct: 108 IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV 167
Query: 299 ASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISL 358
+ + ++ V S + + A I +
Sbjct: 168 SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRI 227
Query: 359 QFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQ--EISNC 416
+ ++ T +++V +A A+ + R + +S
Sbjct: 228 WDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAI 287
Query: 417 LFNFSNSMIASSSLDGTAKLWDVRTM-CCFYTLKNHEDEVLDIAFDYSGSKLATASSDQT 475
+ + I S + ++++R+ + D++ + F +A D
Sbjct: 288 TTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQ 346
Query: 476 ANLW 479
+ L
Sbjct: 347 SFLE 350
Score = 63.0 bits (151), Expect = 3e-11
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 536 TFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNG 595
T GH V V++G+ D R++ + + + + L H+ V++ + +G
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA-HG 64
Query: 596 DTIITASKDNTCCIWRSMN 614
+++ S D T +W
Sbjct: 65 GILVSGSTDRTVRVWDIKK 83
Score = 59.9 bits (143), Expect = 3e-10
Identities = 44/261 (16%), Positives = 90/261 (34%), Gaps = 42/261 (16%)
Query: 201 RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGC----------------- 243
+TGS D T +W + + + + E
Sbjct: 110 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG 169
Query: 244 -----LTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLW 298
++GSYD T +WD+ + GH + +Y + + ++ S D T+++W
Sbjct: 170 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY-STIYDHERKRCISASMDTTIRIW 228
Query: 299 ASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISL 358
E + T +GH+A V F + + + HT
Sbjct: 229 DLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAIT 288
Query: 359 QFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIH-ILTGHSQEISNCL 417
F N+L++GS ++ +++++ S K +H + + +I +
Sbjct: 289 TFYVSDNILVSGS-ENQFNIYNLR----------------SGKLVHANILKDADQIWSVN 331
Query: 418 FNFSNSMIASSSLDGTAKLWD 438
F +++A+ DG + L
Sbjct: 332 FK-GKTLVAAVEKDGQSFLEI 351
Score = 58.8 bits (140), Expect = 7e-10
Identities = 27/187 (14%), Positives = 56/187 (29%), Gaps = 3/187 (1%)
Query: 198 FGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDI 257
G ++GSYD T +WD+ + GH + +Y+ + + T
Sbjct: 170 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWD 229
Query: 258 KSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVT 317
E+ + + + + SA T
Sbjct: 230 LENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITT 289
Query: 318 FSPDQSTFCSCSMDHTARIFNTNSGQEMH-TLKAHTGPVISLQFSSDRNMLITGSFDSSI 376
F + S S ++ I+N SG+ +H + + S+ F ++ D
Sbjct: 290 FYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQS 347
Query: 377 VVWDIQY 383
+ + +
Sbjct: 348 FLEILDF 354
Score = 54.1 bits (128), Expect = 2e-08
Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Query: 191 TNITFDKFGTRCLTGSYDRTCKLWDIKSGHEI-CTYRGHQNVVYAVAFSEPYGCLTGSYD 249
+ IT L + +++++SG + + +++V F D
Sbjct: 285 SAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKD 344
Query: 250 RTCKLWDI 257
L +
Sbjct: 345 GQSFLEIL 352
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 106 bits (265), Expect = 1e-25
Identities = 61/377 (16%), Positives = 114/377 (30%), Gaps = 29/377 (7%)
Query: 224 TYRGHQNVVYAVAFSEPYGCL--TGSYDRTCKLWDIKSGH--EICTYRGHQNVVYAVAFS 279
+ + A++ + +++ ++ + H V V ++
Sbjct: 2 YHSFLVEPISCHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA 60
Query: 280 EPYGDKILTGSFDKTLKLWASAKEEC-----IQTYRGHSAEVTFSPDQSTFCSCSMDHTA 334
P ++I+T D+ +W I + V ++P++ F S
Sbjct: 61 -PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 119
Query: 335 RIFNTNSGQEMHTLKAHTG----PVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNA 390
I + K V+SL + + +L GS D ++ +
Sbjct: 120 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP 179
Query: 391 YAESTYRASHKPIHILTGHSQ--EISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTL 448
+ S + F+ + S +A S D T L D TL
Sbjct: 180 APTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 239
Query: 449 KNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDY 508
+ +L + F S +A L+T A L +F G + +
Sbjct: 240 ASETLPLLAVTFITESSLVAAGHDCFP-VLFTYDSAAGKL-SFGGRLDVPKQSSQRGLTA 297
Query: 509 SGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGK----LVLSGSQDTT 564
+ D+ A A L + H N VS++S GK + D
Sbjct: 298 RER---FQNLDKKASSEGSAAAGAGLDS--LHKNSVSQISVLSGGKAKCSQFCTTGMDGG 352
Query: 565 CRLWSTESGE-CIQVLK 580
+W S E ++ LK
Sbjct: 353 MSIWDVRSLESALKDLK 369
Score = 100 bits (249), Expect = 1e-23
Identities = 50/351 (14%), Positives = 104/351 (29%), Gaps = 63/351 (17%)
Query: 316 VTFSPDQSTFCSCSMDHTARIFNTNSGQ--EMHTLKAHTGPVISLQFSSDRNMLITGSFD 373
++ D++ C +H I+ + + ++H LK H G V + ++ D N ++T D
Sbjct: 13 HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD 72
Query: 374 SSIVVWDIQYQF--------------------------------GTRNAYAESTYRASHK 401
+ VW ++ + +
Sbjct: 73 RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV 132
Query: 402 PIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRT------------------MC 443
HI + + ++ ++ ++A+ S D +++
Sbjct: 133 CKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 192
Query: 444 CFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLD 503
+ + V + F +GS++A S D T L + ++E +L
Sbjct: 193 LMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA----DKKMAVATLASETLPLLA 248
Query: 504 IAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDT 563
+ F S +A L+T A L +F G + + S + D
Sbjct: 249 VTFITESSLVAAGHDCFP-VLFTYDSAAGKL-SFGGRLDVPKQSSQRGLTARERFQNLDK 306
Query: 564 TCRLWSTESGECIQVLKAHEDDV----FSCGFNYNGDTIITASKDNTCCIW 610
+ + + H++ V G T D IW
Sbjct: 307 KASSEGSAAAG-AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Score = 74.5 bits (181), Expect = 6e-15
Identities = 34/279 (12%), Positives = 81/279 (29%), Gaps = 34/279 (12%)
Query: 351 HTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHS 410
P+ ++ DR + + + +++ +H L H+
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN--------------KWVQVHELKEHN 51
Query: 411 QEISNCLFNFSNSMIASSSLDGTAKLWDVRTMC--CFYTLKNHEDEVLDIAFDYSGSKLA 468
+++ + ++ I + D A +W ++ + + + + K A
Sbjct: 52 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFA 111
Query: 469 TASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVG 528
S + ++ + + S VL + + + LA S D ++++
Sbjct: 112 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 171
Query: 529 GA-----------------VELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTE 571
EL+ V V F G V S D+T L +
Sbjct: 172 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 231
Query: 572 SGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIW 610
+ L + + + F + D ++
Sbjct: 232 KKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLF 269
Score = 67.6 bits (163), Expect = 1e-12
Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Query: 540 HSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESG--ECIQVLKAHEDDVFSCGFNYNGDT 597
+S +++ + + ++ + LK H V + + +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 598 IITASKDNTCCIWRSMN 614
I+T D +W
Sbjct: 66 IVTCGTDRNAYVWTLKG 82
Score = 54.1 bits (128), Expect = 2e-08
Identities = 14/120 (11%), Positives = 34/120 (28%), Gaps = 16/120 (13%)
Query: 201 RCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIK-- 258
+ +D L+ S ++ G +V + + + D K
Sbjct: 256 SLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQR------GLTARERFQNLDKKAS 309
Query: 259 ----SGHEICTYRGHQNVVYAVAFSEPYGD---KILTGSFDKTLKLW-ASAKEECIQTYR 310
+ H+N V ++ + T D + +W + E ++ +
Sbjct: 310 SEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLK 369
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 101 bits (252), Expect = 4e-24
Identities = 49/346 (14%), Positives = 96/346 (27%), Gaps = 32/346 (9%)
Query: 273 VYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVT---FSPDQSTFCSCS 329
Y+ + + + D + I T H V S +
Sbjct: 12 AYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG 70
Query: 330 MDHTARIFNTNSGQEMHTL-----KAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQ 384
++++ + + + S + D LI G S++ +WD+
Sbjct: 71 -KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 129
Query: 385 FGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCC 444
A S+ A + N + + + +L + C
Sbjct: 130 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 189
Query: 445 FYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDI 504
+ + T D T W + + S++ +
Sbjct: 190 DISNDGTKLW--------------TGGLDNTVRSWDLRE-----GRQLQQHDFTSQIFSL 230
Query: 505 AFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTT 564
+ +G LA ++ V + + H + V + F GK +S +D
Sbjct: 231 GYCPTGEWLAVGMESSNVEVLHVNKPDK--YQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288
Query: 565 CRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIW 610
W T G I K V SC + + I+T S D ++
Sbjct: 289 LNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVY 333
Score = 90.6 bits (223), Expect = 2e-20
Identities = 53/313 (16%), Positives = 92/313 (29%), Gaps = 37/313 (11%)
Query: 203 LTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHE 262
+ D + +I T H VV AV S P + K+WDI
Sbjct: 26 VPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGN 84
Query: 263 ICT-----YRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE-- 315
N + + P G ++ G TL +W A S+
Sbjct: 85 KSPVSQLDCLNRDNYIRSCKLL-PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPA 143
Query: 316 ---VTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSF 372
+ SPD SC D +++ ++ + + HT + S+D L TG
Sbjct: 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203
Query: 373 DSSIVVWDI------------------------QYQFGTRNAYAESTYRASHKPIHILTG 408
D+++ WD+ ++ + + + L
Sbjct: 204 DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL 263
Query: 409 HSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLA 468
H + + F + S+ D W + K VL +
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIV 322
Query: 469 TASSDQTANLWTV 481
T S D+ A ++ V
Sbjct: 323 TGSGDKKATVYEV 335
Score = 89.1 bits (219), Expect = 6e-20
Identities = 48/334 (14%), Positives = 89/334 (26%), Gaps = 33/334 (9%)
Query: 244 LTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKE 303
+ D + +I T H VV AV S + TG +K+W +
Sbjct: 26 VPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTIS-NPTRHVYTGG-KGCVKVWDISHP 82
Query: 304 ECIQT-----YRGHSAEVT---FSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPV 355
+ PD T T I++ + +
Sbjct: 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT---- 138
Query: 356 ISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISN 415
+ +I + + + GH+ S
Sbjct: 139 ----------SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC 188
Query: 416 CLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQT 475
+ + + + LD T + WD+R + ++ + + +G LA
Sbjct: 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSN 247
Query: 476 ANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQ 535
+ V Y S VL + F Y G + D W + Q
Sbjct: 248 VEVLHVNK-----PDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ 302
Query: 536 TFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWS 569
+ S+ V K +++GS D ++
Sbjct: 303 S--KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 76.4 bits (186), Expect = 1e-15
Identities = 35/305 (11%), Positives = 74/305 (24%), Gaps = 68/305 (22%)
Query: 185 SHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICT-----YRGHQNVVYAVAFSE 239
+H + +T TG K+WDI N + +
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 240 -----PYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKT 294
G + T A++ +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 295 LKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLK----- 349
L Q + ++ + S D + + +D+T R ++ G+++
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 350 -----------------------------------AHTGPVISLQFSSDRNMLITGSFDS 374
H V+SL+F+ ++ D+
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287
Query: 375 SIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTA 434
+ W I + S + +C + + I + S D A
Sbjct: 288 LLNAWRTP----------------YGASIF-QSKESSSVLSCDISVDDKYIVTGSGDKKA 330
Query: 435 KLWDV 439
+++V
Sbjct: 331 TVYEV 335
Score = 76.0 bits (185), Expect = 1e-15
Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 4/179 (2%)
Query: 207 YDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTY 266
D +WD+ + + ++GH + + S L
Sbjct: 161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ 220
Query: 267 RGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTY--RGHSAEVTFSPDQST 324
+ ++++ + P G+ + G +++ K + Q + + F+
Sbjct: 221 HDFTSQIFSLGYC-PTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW 279
Query: 325 FCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQY 383
F S D+ + T G + K + V+S S D ++TGS D V+++ Y
Sbjct: 280 FVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 337
Score = 69.1 bits (167), Expect = 3e-13
Identities = 41/281 (14%), Positives = 76/281 (27%), Gaps = 18/281 (6%)
Query: 331 DHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNA 390
D ++++TL H V ++ S+ + TG + VWDI
Sbjct: 31 DALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDI--------- 79
Query: 391 YAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKN 450
S I +C + T +WD+ +
Sbjct: 80 --SHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137
Query: 451 HEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSG 510
A S S N+ + D S
Sbjct: 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISN 193
Query: 511 SKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWST 570
+ + + + ++++ + + PTG+ + G + + +
Sbjct: 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253
Query: 571 ESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIWR 611
+ Q+ HE V S F Y G ++ KDN WR
Sbjct: 254 NKPDKYQL-HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR 293
Score = 48.3 bits (113), Expect = 1e-06
Identities = 17/156 (10%), Positives = 35/156 (22%), Gaps = 9/156 (5%)
Query: 463 SGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTA 522
G + + T H V V + T
Sbjct: 20 DGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAV---TISNPTRHVYTGG-KGCV 74
Query: 523 KLWTV----GGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQV 578
K+W + + N + P G ++ G + +T +W +
Sbjct: 75 KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIK 134
Query: 579 LKAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMN 614
+ + D+ + S + I
Sbjct: 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 98.1 bits (242), Expect = 5e-23
Identities = 27/305 (8%), Positives = 71/305 (23%), Gaps = 11/305 (3%)
Query: 307 QTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNM 366
+T RG + + +P C+ + S + H+ + S
Sbjct: 14 RTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYY 72
Query: 367 LITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIA 426
+G ++ +WD + K I + + + +
Sbjct: 73 CASGDVHGNVRIWDTTQTTHILKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVF 131
Query: 427 SSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVE 486
+ + I+ +
Sbjct: 132 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 191
Query: 487 LLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSK 546
+ Y + + + + HS V
Sbjct: 192 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS--------LKNVAHSGSVFG 243
Query: 547 VSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHED-DVFSCGFNYNGDTIITASKDN 605
+++ P G + S S D T ++W+ + + + + + G + +++ S +
Sbjct: 244 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG 303
Query: 606 TCCIW 610
Sbjct: 304 FINFV 308
Score = 91.1 bits (224), Expect = 1e-20
Identities = 34/292 (11%), Positives = 69/292 (23%), Gaps = 7/292 (2%)
Query: 191 TNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG--CLTGSY 248
+ G + + + + S + Y H + S P G C +G
Sbjct: 21 VVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTS-PSGYYCASGDV 78
Query: 249 DRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQT 308
++WD I S K + + + + +
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138
Query: 309 YRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLI 368
+ + S + +
Sbjct: 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR-- 196
Query: 369 TGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASS 428
S N + HS + ++ + IAS+
Sbjct: 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 256
Query: 429 SLDGTAKLWDVRTMCCFYTLKNHED-EVLDIAFDYSGSKLATASSDQTANLW 479
S D T K+W+V T+ T+ E + ++ L + S++ N
Sbjct: 257 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 81.9 bits (200), Expect = 1e-17
Identities = 45/308 (14%), Positives = 92/308 (29%), Gaps = 19/308 (6%)
Query: 270 QNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVT---FSPDQSTFC 326
+ + + P GDKI + ++ + Y HS + T SP
Sbjct: 17 RGTAVVLGNT-PAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCA 74
Query: 327 SCSMDHTARIFNTNSGQEM--HTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQ 384
S + RI++T + T+ +GPV + + S+ + +
Sbjct: 75 SGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD 134
Query: 385 FGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCC 444
GT N RA + + + IS N + + +
Sbjct: 135 TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS 194
Query: 445 FYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDI 504
+ + + V +
Sbjct: 195 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDD----------SLKNVAHSGSVFGL 244
Query: 505 AFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSN-EVSKVSFHPTGKLVLSGSQDT 563
+ G+K+A+AS+D+T K+W V ++ +T + E ++ T + ++S S +
Sbjct: 245 TWSPDGTKIASASADKTIKIWNVATL-KVEKTIPVGTRIEDQQLGIIWTKQALVSISANG 303
Query: 564 TCRLWSTE 571
+ E
Sbjct: 304 FINFVNPE 311
Score = 67.2 bits (162), Expect = 1e-12
Identities = 38/274 (13%), Positives = 78/274 (28%), Gaps = 32/274 (11%)
Query: 181 KMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICT--YRGHQNVVYAVAFS 238
++ H T G C +G ++WD I V +++
Sbjct: 52 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWD 111
Query: 239 EPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLW 298
+ + + + + A+ + +
Sbjct: 112 SESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTV 171
Query: 299 ASAKEECIQTYRGH------SAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHT----- 347
A + + V ++PD S F S D T ++N G +
Sbjct: 172 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS 231
Query: 348 --LKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHI 405
AH+G V L +S D + + S D +I +W++ A+ K
Sbjct: 232 LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV----------------ATLKVEKT 275
Query: 406 LTGHSQEISNCL-FNFSNSMIASSSLDGTAKLWD 438
+ ++ L ++ + S S +G +
Sbjct: 276 IPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 59.9 bits (143), Expect = 2e-10
Identities = 26/230 (11%), Positives = 55/230 (23%), Gaps = 1/230 (0%)
Query: 153 SVITQLEQSIMKLQKKLKEGFAQRYEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCK 212
+V + K F+ + + +
Sbjct: 81 NVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNG 140
Query: 213 LWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNV 272
++ ++ S+ + +
Sbjct: 141 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD 200
Query: 273 VYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDH 332
A + G +L D T + G +T+SPD + S S D
Sbjct: 201 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK 260
Query: 333 TARIFNTNSGQEMHTLKAHTG-PVISLQFSSDRNMLITGSFDSSIVVWDI 381
T +I+N + + T+ T L + L++ S + I +
Sbjct: 261 TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 52.2 bits (123), Expect = 7e-08
Identities = 8/73 (10%), Positives = 18/73 (24%), Gaps = 1/73 (1%)
Query: 542 NEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITA 601
+ P G + + T+ S ++ H + +G +
Sbjct: 18 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASG 76
Query: 602 SKDNTCCIWRSMN 614
IW +
Sbjct: 77 DVHGNVRIWDTTQ 89
Score = 49.9 bits (117), Expect = 4e-07
Identities = 16/117 (13%), Positives = 33/117 (28%), Gaps = 4/117 (3%)
Query: 500 KVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSG 559
+ + +G K+ + + VG + + HS++ + P+G SG
Sbjct: 19 TAVVLGNTPAGDKIQYCNGT-SVYTVPVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASG 76
Query: 560 SQDTTCRLWSTESGECIQVL--KAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMN 614
R+W T I V ++ I + +
Sbjct: 77 DVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF 133
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 94.8 bits (234), Expect = 1e-21
Identities = 28/346 (8%), Positives = 73/346 (21%), Gaps = 40/346 (11%)
Query: 276 VAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAE----VTFSPDQST-FCSCSM 330
A + ++ ++ L + A + ++ +PD T + +
Sbjct: 2 PALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 331 DHTARIFNTNSGQEMHTL------KAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQ 384
+ ++ + + S S D + + + +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 385 FGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCC 444
++ + + L ++ + DV+T
Sbjct: 121 PPRLEVFSTAD----GLEAKPVRTFPMPRQVYLMRAADDGSLYVA-GPDIYKMDVKTGKY 175
Query: 445 FYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDI 504
L + S +
Sbjct: 176 TVALPLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLY--------------------TIA 214
Query: 505 AFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTT 564
F ATA + Q F + P + G +
Sbjct: 215 RFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNR- 273
Query: 565 CRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIW 610
+ + + I+ + + F+ GD + N ++
Sbjct: 274 LAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
Score = 81.7 bits (200), Expect = 2e-17
Identities = 38/400 (9%), Positives = 87/400 (21%), Gaps = 83/400 (20%)
Query: 199 GTRCLTGSYDRTCKLWDIKSGHEICTYR-GHQNVVYAVAFSEPYG---CLTGSYDRTCKL 254
+ +Y + D+ S + + + P + ++
Sbjct: 8 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMA-PDNRTAYVLNNHYGDIYG 66
Query: 255 WDIKSGHEIC------TYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQT 308
D+ + +Y+ A S P G ++
Sbjct: 67 IDLDTCKNTFHANLSSVPGEVGRSMYSFAIS-PDGKEVYATVNPTQRLNDH--------- 116
Query: 309 YRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGP--VISLQFSSDRNM 366
+F+T G E ++ P V ++ + D ++
Sbjct: 117 ------------------YVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL 158
Query: 367 LITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIA 426
+ G + V + K L +
Sbjct: 159 YVAGPDIYKMDVK-------------------TGKYTVALPLRNWNRKGYSAPDVLYFWP 199
Query: 427 SSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVE 486
S + F ATA +
Sbjct: 200 HQSPRHEFSMLYTIA-----------------RFKDDKQDPATADLLYGYLSVDLKTGKT 242
Query: 487 LLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSK 546
Q F + ++ AK +L++ +
Sbjct: 243 HTQEFADLTELYFTG---LRSPKDPNQIYGVLNRLAKYDLKQR--KLIKAA-NLDHTYYC 296
Query: 547 VSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDV 586
V+F G + G +++ ++ E ++ +K D+
Sbjct: 297 VAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336
Score = 33.6 bits (75), Expect = 0.069
Identities = 7/51 (13%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Query: 191 TNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYR---GHQNVVYAVAFS 238
+ FDK G + G +++ + ++ + G + F
Sbjct: 295 YCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFI 345
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 88.1 bits (216), Expect = 8e-20
Identities = 44/306 (14%), Positives = 91/306 (29%), Gaps = 25/306 (8%)
Query: 178 EKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAF 237
E K + H +T +T + ++GSYD W S H+ H N++ ++
Sbjct: 4 EVLKTISGHNKGITALTVNPL----ISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDN 54
Query: 238 SEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKL 297
S+ + + + VA + G + + D L L
Sbjct: 55 SKA--------QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLIL 106
Query: 298 WASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQ-EMHTLKAHTGPVI 356
+ + +T ++F + +
Sbjct: 107 QSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPS 166
Query: 357 SLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNC 416
+ S + V+ I S + I+ ++ E
Sbjct: 167 YISISPSETY-----IAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGAN 221
Query: 417 LFNFSNSMIASSSLDGTAKLWDVRT-MCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQT 475
++A+ SLD ++ V+ M L H+D V ++ ++ + S L ++ +D
Sbjct: 222 EEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE-TPSTLVSSGADAC 280
Query: 476 ANLWTV 481
W V
Sbjct: 281 IKRWNV 286
Score = 82.7 bits (202), Expect = 4e-18
Identities = 37/315 (11%), Positives = 89/315 (28%), Gaps = 35/315 (11%)
Query: 260 GHE--ICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVT 317
GH+ + T GH + A+ + +++GS+D + W+S+ ++ HS +
Sbjct: 1 GHDEVLKTISGHNKGITALTVN-----PLISGSYDGRIMEWSSSS-----MHQDHSNLIV 50
Query: 318 ---FSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDS 374
S Q D T A ++ + L+ +
Sbjct: 51 SLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFT 110
Query: 375 SIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTA 434
++ ++ Y A + + + + + +
Sbjct: 111 GDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI 170
Query: 435 KLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGH 494
+ K ++ S T
Sbjct: 171 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT-------------------SKINAI 211
Query: 495 SNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGK 554
S + ++ + +AT S D +++V +++++ H + V+ + +
Sbjct: 212 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST 271
Query: 555 LVLSGSQDTTCRLWS 569
LV S D + W+
Sbjct: 272 LV-SSGADACIKRWN 285
Score = 82.7 bits (202), Expect = 4e-18
Identities = 38/311 (12%), Positives = 95/311 (30%), Gaps = 27/311 (8%)
Query: 219 GHE--ICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAV 276
GH+ + T GH + A+ + ++GSYD W S H+ H N++ ++
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP---LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSL 52
Query: 277 AFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARI 336
S+ + + + ++ ++ E P ++ +
Sbjct: 53 DNSKAQ-------------EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTN 99
Query: 337 FNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTY 396
+ + T ++ S+ + ++ +
Sbjct: 100 DDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKT 159
Query: 397 RASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVL 456
KP +I S+ ++ + E
Sbjct: 160 PLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKG 219
Query: 457 DIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATA 516
+ +AT S D +++V +++++ H + V+ ++ ++ + S L ++
Sbjct: 220 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVN---NLLWE-TPSTLVSS 275
Query: 517 SSDQTAKLWTV 527
+D K W V
Sbjct: 276 GADACIKRWNV 286
Score = 77.3 bits (188), Expect = 3e-16
Identities = 50/315 (15%), Positives = 97/315 (30%), Gaps = 36/315 (11%)
Query: 302 KEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFS 361
+E ++T GH+ +T + + S S D ++++S + H+ ++SL S
Sbjct: 2 HDEVLKTISGHNKGIT-ALTVNPLISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNS 55
Query: 362 SDRNMLITGSFDSSIVVWDIQYQFGTRN----AYAESTYRASHKPIHILTGHSQEISNCL 417
+ D+ V +++FG++ A + +L S
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 115
Query: 418 FNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTAN 477
NS ++ SL + K + EV +K + S +
Sbjct: 116 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 175
Query: 478 LWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTF 537
G + + + S EV
Sbjct: 176 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKI------------------------NAI 211
Query: 538 YGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTES-GECIQVLKAHEDDVFSCGFNYNGD 596
E LV +GS DT ++S + + I+ L AH+D V + +
Sbjct: 212 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS- 270
Query: 597 TIITASKDNTCCIWR 611
T++++ D W
Sbjct: 271 TLVSSGADACIKRWN 285
Score = 51.9 bits (122), Expect = 7e-08
Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 529 GAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFS 588
G E+L+T GH+ ++ ++ +P ++SGS D WS+ S H + + S
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVS 51
Query: 589 CGFNYNGDTIITASKDNTCCIWRSMN 614
+ + + D + +
Sbjct: 52 LDNSKAQEYSSISWDDTLKVNGITKH 77
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 87.7 bits (215), Expect = 1e-19
Identities = 38/305 (12%), Positives = 95/305 (31%), Gaps = 17/305 (5%)
Query: 181 KMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYR-GHQNVVYAVAFSE 239
++ H +T ++ G + + WDI +G + H ++ + +
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS 65
Query: 240 PYGCLTGSYDRTCKLWDI-KSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLW 298
T S+D K+ SG + ++ + + I + K + ++
Sbjct: 66 KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 125
Query: 299 ASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISL 358
+ K + S + Q + + H + S+
Sbjct: 126 SHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV 185
Query: 359 QFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLF 418
FS++ L+ ++ + + F + T H+ +++ +
Sbjct: 186 AFSNNGAFLVATDQSRKVIPYSVANNF-------------ELAHTNSWTFHTAKVACVSW 232
Query: 419 NFSNSMIASSSLDGTAKLWDVRT--MCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTA 476
+ N +A+ SLD + +W++ H ++ + + + +A D
Sbjct: 233 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNI 292
Query: 477 NLWTV 481
W V
Sbjct: 293 KFWNV 297
Score = 81.6 bits (199), Expect = 1e-17
Identities = 43/314 (13%), Positives = 94/314 (29%), Gaps = 26/314 (8%)
Query: 304 ECIQTYRGHSAEVT---FSPDQSTFCSCSMDHTARIFNTNSGQEMHTL-KAHTGPVISLQ 359
Q GH+ +T S D T S + ++ ++G H + ++
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 360 FSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFN 419
+ + L T S+D + V + + + + + ++ C
Sbjct: 63 TT-SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK- 120
Query: 420 FSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLW 479
T +A +A D +++
Sbjct: 121 -----------------HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVY 163
Query: 480 TVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYG 539
+ GA H E++ V + + + S + ++
Sbjct: 164 KLSGASVSEVKTIVHPAEITSV-AFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTF 222
Query: 540 HSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVL--KAHEDDVFSCGFNYNGDT 597
H+ +V+ VS+ P + +GS D + +W+ ++ AH + N T
Sbjct: 223 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT 282
Query: 598 IITASKDNTCCIWR 611
I++A +D+ W
Sbjct: 283 IVSAGQDSNIKFWN 296
Score = 76.2 bits (185), Expect = 9e-16
Identities = 35/308 (11%), Positives = 84/308 (27%), Gaps = 21/308 (6%)
Query: 224 TYRGHQNVVYAVAFSEPYG--CLTGSYDRTCKLWDIKSGHEICTYR-GHQNVVYAVAFSE 280
GH + A++ S G + + WDI +G + H ++ + +
Sbjct: 7 VRYGHNKAITALSSS-ADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS 65
Query: 281 PYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTN 340
L+ + ++ ++ + V S + S A + +
Sbjct: 66 KG-------------DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD 112
Query: 341 SGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASH 400
L + + + Q + Y S S
Sbjct: 113 IAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE 172
Query: 401 KPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAF 460
+ ++ S + + + + H +V +++
Sbjct: 173 VKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW 232
Query: 461 DYSGSKLATASSDQTANLWTV-GGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSD 519
+LAT S D + +W + + + H+ ++ + + + +A D
Sbjct: 233 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSS---VNSVIWLNETTIVSAGQD 289
Query: 520 QTAKLWTV 527
K W V
Sbjct: 290 SNIKFWNV 297
Score = 67.3 bits (162), Expect = 7e-13
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Query: 532 ELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVL-KAHEDDVFSCG 590
+ Q YGH+ ++ +S GK + S + W +G +V H +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 591 FNYNGDTIITASKDNTCCIWRSMNR 615
GD + D+ + +
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSG 87
Score = 56.1 bits (133), Expect = 3e-09
Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 3/129 (2%)
Query: 486 ELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYGHSNEVS 545
+ Q YGH+ ++ ++ G L +A ++ W + + H+ ++
Sbjct: 3 SIDQVRYGHNKAIT---ALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT 59
Query: 546 KVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGDTIITASKDN 605
+ G L D + + SG A++ G + D I +
Sbjct: 60 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY 119
Query: 606 TCCIWRSMN 614
S
Sbjct: 120 KHIAIYSHG 128
Score = 53.1 bits (125), Expect = 4e-08
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 305 CIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTL--KAHTGPVISLQFSS 362
+ A V++SPD + S+D++ ++N N + + AH ++
Sbjct: 219 SWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 278
Query: 363 DRNMLITGSFDSSIVVWDIQY 383
+ +++ DS+I W++ +
Sbjct: 279 NETTIVSAGQDSNIKFWNVPF 299
Score = 28.4 bits (61), Expect = 2.7
Identities = 6/39 (15%), Positives = 13/39 (33%)
Query: 178 EKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDI 216
+ +H + N T ++ D K W++
Sbjct: 259 HPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 82.5 bits (202), Expect = 1e-17
Identities = 29/338 (8%), Positives = 69/338 (20%), Gaps = 44/338 (13%)
Query: 284 DKILTGSFDKTLKLWASAKEECIQTYRGHSA-----EVTFSPDQST-FCSCSMDHTARIF 337
D IL + L + + K + A +P + + + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 338 NTNSGQEMHTLKAHTGPVI-----SLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYA 392
+ +G+ + + T S D L + + + Q
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRV---- 117
Query: 393 ESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHE 452
+ Y A ++I+ + S + D + D
Sbjct: 118 -ALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDL--HVMDPEAGTLVEDKPIQS 174
Query: 453 DEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSK 512
E A + S+ V
Sbjct: 175 WEAETYAQPDVLAVWNQ-----------------------HESSGVMATPFYTARKDIDP 211
Query: 513 LATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTES 572
+ + ++ + +P + E
Sbjct: 212 ADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA--FGAYNVLESFDLEK 269
Query: 573 GECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIW 610
I+ + +S + +G T+ +
Sbjct: 270 NASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAY 306
Score = 78.7 bits (192), Expect = 2e-16
Identities = 25/305 (8%), Positives = 60/305 (19%), Gaps = 31/305 (10%)
Query: 203 LTGSYDRTCKLWDIKSGHEICTYR--GHQNVVYAVAFSEPYG---CLTGSYDRTCKLWDI 257
L + + D + + P G T + + D+
Sbjct: 5 LAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVA-PGGRIAYATVNKSESLVKIDL 63
Query: 258 KSGHEICTYRGHQN-----VVYAVAFSEPYGDKILTGSFDKTLKLWASA----------- 301
+G + ++ A S P G + L+L
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALS-PDGKTLAIYESPVRLELTHFEVQPTRVALYDA 122
Query: 302 ---KEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTL----KAHTGP 354
+ ++ D S D + E +
Sbjct: 123 ETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQ 182
Query: 355 VISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEIS 414
L + + DI T T + + ++
Sbjct: 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242
Query: 415 NCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQ 474
+ + + + +D+ + + GS + +
Sbjct: 243 YFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALG 301
Query: 475 TANLW 479
+
Sbjct: 302 DLAAY 306
Score = 54.4 bits (129), Expect = 2e-08
Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 8/159 (5%)
Query: 211 CKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTYRGHQ 270
D+ + G + A + +Y D+++G
Sbjct: 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239
Query: 271 NVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYR-GHSAE-VTFSPDQSTFCSC 328
+V Y P + L+ + K I+ HS V S D ST
Sbjct: 240 DVFYFSTAVNPAKTRA--FGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG 297
Query: 329 SMDHTARIFNTNSGQEMHTLKAHTGPVISLQ----FSSD 363
++ + ++ + +SL F+ D
Sbjct: 298 GALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336
Score = 37.1 bits (84), Expect = 0.006
Identities = 4/52 (7%), Positives = 14/52 (26%), Gaps = 4/52 (7%)
Query: 191 TNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYR----GHQNVVYAVAFS 238
++ G+ G +D ++ + ++ F+
Sbjct: 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFT 334
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 80.2 bits (196), Expect = 7e-17
Identities = 33/324 (10%), Positives = 69/324 (21%), Gaps = 37/324 (11%)
Query: 204 TGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFS-----------EPYGCLTGSYDRTC 252
+ + D ++G I G + + G
Sbjct: 23 HFAAVTQQFVIDGEAGRVIGMIDGGF--LPNPVVADDGSFIAHASTVFSRIARGERTDYV 80
Query: 253 KLWDIKSGHEICTYRGHQNVVYAVAFS------EPYGDKILTGSF--DKTLKLWASAKEE 304
+++D + + V P G +L F + + +
Sbjct: 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 140
Query: 305 CIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTG------PVISL 358
+ F TF D + + +
Sbjct: 141 FKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHP 200
Query: 359 QFSSDRNMLITGSFDSSIVVWDIQ------YQFGTRNAYAESTYRASHKPIHILTGHSQE 412
+S L+ ++ I D+ AE + H
Sbjct: 201 AYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 260
Query: 413 ISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKL--ATA 470
L + + D +T + E+ I L A +
Sbjct: 261 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYALS 319
Query: 471 SSDQTANLWTVGGAVELLQTFYGH 494
+ D+T + E L++
Sbjct: 320 TGDKTLYIHDAESG-EELRSVNQL 342
Score = 71.4 bits (173), Expect = 5e-14
Identities = 22/283 (7%), Positives = 63/283 (22%), Gaps = 32/283 (11%)
Query: 196 DKFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNV-------VYAVAFSEPYGCL---T 245
+R G +++D + + + + L
Sbjct: 65 STVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124
Query: 246 GSYDRTCKLWDIKSGHEICTYRGHQNV-------VYAVAFSEPYGDKILTGSFDKTLKLW 298
S + D++ + + T ++
Sbjct: 125 FSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 184
Query: 299 ASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSG--QEMHTLKAHTGPVI 356
+ +S + + +SG + + ++A T
Sbjct: 185 HTEVFHPE--DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER 242
Query: 357 SLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYR----ASHKPIHILTGHSQE 412
+ + + + + + R+ A + + + +
Sbjct: 243 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEI 302
Query: 413 ISNCLFNFS----NSMIASSSLDGTAKLWDVRTMCCFYTLKNH 451
S N S + A S+ D T + D + ++
Sbjct: 303 DS---INVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 342
Score = 57.1 bits (136), Expect = 2e-09
Identities = 23/219 (10%), Positives = 55/219 (25%), Gaps = 32/219 (14%)
Query: 177 YEKFKMLKSHLLPLTNITFDKFGTRCLTGSYDRTCKLWDIKSGHEICTYR------GHQN 230
E + +P F D + + +
Sbjct: 136 LEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEF 195
Query: 231 VVYAVAFSEPYGCL-TGSYDRTCKLWDIKSG--HEICTYRGHQNVVYAVAF--------- 278
++ A+S+ G L +Y D+ SG + A +
Sbjct: 196 LINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVA 255
Query: 279 ----------SEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSA--EVTFSPDQST-- 324
D+ + + + + + E + + + S D+
Sbjct: 256 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLL 315
Query: 325 FCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSD 363
+ + D T I + SG+E+ ++ + +
Sbjct: 316 YALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 78.5 bits (192), Expect = 2e-16
Identities = 19/351 (5%), Positives = 66/351 (18%), Gaps = 60/351 (17%)
Query: 254 LWDIKSGHEICTYRGHQ--NVVYA-----VAFSEPYGDKILTGSFDKTLKLWASAKEECI 306
++D + + G A + Y + G+ +++ + +
Sbjct: 2 VYDADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHA 61
Query: 307 QTYRGHSAEVT------FSPDQST---FCSCSMDHTARIFNTNSGQEMHTLKAHTGPVIS 357
+ + + ++ A + ++ + +
Sbjct: 62 GEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKML--SEIDTAAC 119
Query: 358 LQFSSD-RNMLITGSFD-SSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISN 415
+ + ++ V A + R + ++
Sbjct: 120 VLAYPAGDDRFTALCESGKALTVTLD--------ANGKEAKRTMSDAFIDVDKDPAFVNA 171
Query: 416 CLFNFSNSMIASSSLDGTAKLWDVRTM--CCFYTLKNHEDEVLDIAFDYSGSKLATASSD 473
+ ++ G + D D + G + +
Sbjct: 172 SRYK---GDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAK 228
Query: 474 QTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVEL 533
Q + + D + +
Sbjct: 229 QNRYYVLMHKGTDGSHK----------------DPGTQVWVYDLKSKQRVARWDLAQ-QK 271
Query: 534 LQTFYGHSNEVSKVSFHPTGK--LVLSGSQDTTCRLWSTESGECIQVLKAH 582
++ + K + + +G V K
Sbjct: 272 VEPLVS-------IQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQI 314
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 78.4 bits (191), Expect = 2e-16
Identities = 36/318 (11%), Positives = 85/318 (26%), Gaps = 22/318 (6%)
Query: 307 QTYRGHSAEVTFSPDQSTFCSCSMDHTA-RIFNTNSG--QEMHTLKAH-TGPVISLQFS- 361
T R + +++ P + R + + H + V +++FS
Sbjct: 14 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73
Query: 362 -SDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNF 420
L +G ++VW + + + + IS+ ++F
Sbjct: 74 IKGSQYLCSGDESGKVIVWGWTFDKESNSVE--------VNVKSEFQVLAGPISDISWDF 125
Query: 421 SNSMIASSSL--DGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANL 478
+ D + + H + S + D + +
Sbjct: 126 EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV 185
Query: 479 WTVGGAVELLQTFY---GHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQ 535
+ G + + + V V + + G ++ ++
Sbjct: 186 FYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 245
Query: 536 TFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVF--SCGFNY 593
+ + D T R+W + +C+Q + + G
Sbjct: 246 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA 305
Query: 594 NGD-TIITASKDNTCCIW 610
G+ II+ S D T +
Sbjct: 306 TGNGRIISLSLDGTLNFY 323
Score = 76.5 bits (186), Expect = 1e-15
Identities = 33/309 (10%), Positives = 78/309 (25%), Gaps = 22/309 (7%)
Query: 191 TNITFDKFGTRCLTGSYDRTC-KLWDIKSG--HEICTYRGHQ-NVVYAVAFSEPYG---C 243
T++++D + D + + GH +VV V FS G
Sbjct: 21 THLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYL 80
Query: 244 LTGSYDRTCKLWDIKSGHEICT--------YRGHQNVVYAVAFSEPYGDKILTGSFDKTL 295
+G +W E + ++ + +++ G ++ +
Sbjct: 81 CSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWD-FEGRRLCVVGEGRDN 139
Query: 296 KLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPV 355
+ + + T + + K
Sbjct: 140 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR 199
Query: 356 ISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISN 415
+ S + V+ + + + + Q
Sbjct: 200 THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE---PVQGGIF 256
Query: 416 CLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYS---GSKLATASS 472
L + A+ D T ++WDV T C + ++ + ++ + S
Sbjct: 257 ALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL 316
Query: 473 DQTANLWTV 481
D T N + +
Sbjct: 317 DGTLNFYEL 325
Score = 66.5 bits (160), Expect = 2e-12
Identities = 29/320 (9%), Positives = 82/320 (25%), Gaps = 26/320 (8%)
Query: 226 RGHQNVVYAVAFSEP-----YGCLTGSYDRTCKLWDIKSGHEICTYRGHQ-NVVYAVAFS 279
+N +++ Y C ++ R D + + GH +VV V FS
Sbjct: 14 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGD-SKVPPVVQFTGHGSSVVTTVKFS 72
Query: 280 -EPYGDKILTGSFDKTLKLWASAKEECIQT--------YRGHSAEVT---FSPDQSTFCS 327
+ +G + +W ++ + ++ + ++ + + C
Sbjct: 73 PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 132
Query: 328 CSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGT 387
+ + ++ +
Sbjct: 133 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF 192
Query: 388 RNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYT 447
+ + ++ T+ + + + S+ I +
Sbjct: 193 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI------SCFDGKSGEFLKYIED 246
Query: 448 LKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFD 507
+ + K AT +D T +W V + + +Q + ++
Sbjct: 247 DQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS-KCVQKWTLDKQQLGNQQVGVVA 305
Query: 508 YSGSKLATASSDQTAKLWTV 527
++ + S D T + +
Sbjct: 306 TGNGRIISLSLDGTLNFYEL 325
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 75.2 bits (184), Expect = 6e-15
Identities = 39/338 (11%), Positives = 77/338 (22%), Gaps = 34/338 (10%)
Query: 288 TGSFDKTLKLWASAKEECIQTYRGHSA--EVTFSPDQSTFCSCSMDHTARIFNTNSGQ-- 343
T + L + E A S D + + +
Sbjct: 37 TLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT 96
Query: 344 ---EMHTLKAHTGPVISLQFSSDRNMLI-TGSFDSSIVVWD------IQYQFGTRNAYAE 393
E+ S + I + V+ D + Q Y E
Sbjct: 97 TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE 156
Query: 394 STYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHED 453
Y + IL H + I + G L D + T + +
Sbjct: 157 QEYHPEPRVAAILASH----------YRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE 206
Query: 454 EVL-DIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSK 512
L D D S TA++ + + +L+ F +
Sbjct: 207 RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFG 266
Query: 513 LATASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTES 572
A+S + G + ++ ++ G + + + L+
Sbjct: 267 PVWATSHMGDDSVALIGTDP--EGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLY---- 320
Query: 573 GECIQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIW 610
L + S ++ + D
Sbjct: 321 --VDATLNPEAEISGSVAV-FDIKAMTGDGSDPEFKTL 355
Score = 49.8 bits (118), Expect = 6e-07
Identities = 23/198 (11%), Positives = 47/198 (23%), Gaps = 15/198 (7%)
Query: 419 NFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANL 478
+ N + G L D T L V SG L D N+
Sbjct: 29 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNM 87
Query: 479 WTV-GGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTF 537
+ + S S + + + G +E +
Sbjct: 88 IDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 147
Query: 538 YGHSNEVSKVSFHPTGK------------LVLSGSQDTTCRLWSTESGECIQVLKAHEDD 585
+ +HP + +++ + L ++ + +
Sbjct: 148 STRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAER 207
Query: 586 VFSCG-FNYNGDTIITAS 602
G + + ITA+
Sbjct: 208 FLHDGGLDGSHRYFITAA 225
Score = 33.2 bits (75), Expect = 0.096
Identities = 18/81 (22%), Positives = 25/81 (30%), Gaps = 17/81 (20%)
Query: 245 TGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSF------------- 291
D K I I G VV F+ G ++ +
Sbjct: 345 GDGSDPEFKTLPIAEWAGIT--EGQPRVVQ-GEFN-KDGTEVWFSVWNGKDQESALVVVD 400
Query: 292 DKTLKLWASAKEECIQTYRGH 312
DKTL+L K+E + T G
Sbjct: 401 DKTLELKHVIKDERLVTPTGK 421
Score = 28.2 bits (62), Expect = 3.3
Identities = 17/154 (11%), Positives = 42/154 (27%), Gaps = 17/154 (11%)
Query: 205 GSYDRTCKLWDIKS---GHEICTYRGHQNVVYAVAFSEPYG-CLTGSYDRTCKLWDIKSG 260
G T + D G + + + + + G ++ + +
Sbjct: 266 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHP------NSQYL 319
Query: 261 HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSP 320
+ T + +VA + D K A+ I + + F+
Sbjct: 320 YVDATLNPEAEISGSVAV--FDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK 377
Query: 321 D-----QSTFCSCSMDHTARIFNTNSGQEMHTLK 349
D S + + + + + + H +K
Sbjct: 378 DGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 411
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 73.9 bits (180), Expect = 1e-14
Identities = 28/409 (6%), Positives = 77/409 (18%), Gaps = 92/409 (22%)
Query: 189 PLTNITFDKFGTR---CLTGSYDRTCKLW--DIKSGHEICTYRGHQNVVYAV-------A 236
+ R L + T + W G + G + A
Sbjct: 21 SSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFA 80
Query: 237 FSEPYG--CLTGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKT 294
+ G +++D + I
Sbjct: 81 LASTSFARSAKGKRTDYVEVFDPVTFLPIADIELP------------------------- 115
Query: 295 LKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSM-DHTARIFNTNSGQEMHTLKAHTG 353
+ + + + A + + K+ +
Sbjct: 116 --------DAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASC 167
Query: 354 PVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEI 413
I GS +S+ D A + A +
Sbjct: 168 FHI---HPGAAATHYLGSCPASLAASD----------LAAAPAAAGIVGAQCTGAQNCSS 214
Query: 414 SNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSD 473
N+ ++ + + + +E F +G ++ +
Sbjct: 215 QAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKN 274
Query: 474 QTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVEL 533
+ + + S + + G S
Sbjct: 275 TDGIMILTVEHSR---SCLAAAENTS-SVTAS---VGQTSGPIS---------------- 311
Query: 534 LQTFYGHSNEVSKVSFHPTGK--LVLSGSQDTTCRLWSTESGECIQVLK 580
+ ++ + G + + ++ S + ++
Sbjct: 312 ------NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354
Score = 65.4 bits (158), Expect = 5e-12
Identities = 33/271 (12%), Positives = 66/271 (24%), Gaps = 25/271 (9%)
Query: 350 AHTGPVISLQFSSD-RNMLIT--GSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHIL 406
A G + R IT F + W G + + +
Sbjct: 17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLG----HSLGAFLSLAVA 72
Query: 407 TGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLD-------IA 459
+ L + S + A +++D T ++ + I
Sbjct: 73 GHSGSDF--ALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIG 130
Query: 460 FDYSGSKLATAS-SDQTANLWTV--GGAVELLQTFYG-HSNEVSKVLDIAFDYSGSKLAT 515
S + L A +V +L ++ H + + S A+
Sbjct: 131 NCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAAS 190
Query: 516 ASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGEC 575
+ A VG Q + + G LV + +
Sbjct: 191 DLAAAPAAAGIVGA-----QCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATM 245
Query: 576 IQVLKAHEDDVFSCGFNYNGDTIITASKDNT 606
+ +E + F G ++ K+
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTD 276
Score = 62.3 bits (150), Expect = 6e-11
Identities = 20/291 (6%), Positives = 58/291 (19%), Gaps = 36/291 (12%)
Query: 182 MLKSHLLPLTNITFD--------KFGTRCLTGSYDRTCKLWDIKSGHEICTYRGHQNVVY 233
L L R G +++D + I +
Sbjct: 61 HSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120
Query: 234 AVAFSEPYGCL---------TGSYDRTCKLWDIKSGHEICTYRGHQNVV-------YAVA 277
+V + + +
Sbjct: 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYL 180
Query: 278 FSEPYGDKILTGSFDKTLKLWASAKEECIQTYRGHSAEVTFSPDQSTFCSCSMDHTARIF 337
S P + A+ Q + + + +
Sbjct: 181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA--AQANYPGMLVWAVASSILQGDI 238
Query: 338 NTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTY- 396
+ + + F S ++ ++ ++ + A AE+T
Sbjct: 239 PAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298
Query: 397 --RASHKPIHILTGHSQEISNCLFNFS----NSMIASSSLDGTAKLWDVRT 441
+ + ++ + + + A+S+ ++D +
Sbjct: 299 VTASVGQTSGPISNGHDSDA---IIAAQDGASDNYANSAGTEVLDIYDAAS 346
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 68.4 bits (166), Expect = 8e-13
Identities = 34/369 (9%), Positives = 78/369 (21%), Gaps = 58/369 (15%)
Query: 288 TGSFDKTLKLWASAKEECIQTYRGHSA--EVTFSPDQSTFCSCSMDHTARIFNTNSGQ-- 343
T + L ++ ++ A S D + + + +
Sbjct: 37 TLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT 96
Query: 344 ---EMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVVWD-------IQYQFGTRNAYAE 393
E+ S + I G++ Q
Sbjct: 97 KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT 156
Query: 394 STYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWDVRT---MCCFYTLKN 450
TY + I+ H ++ T K+ V T
Sbjct: 157 QTYHPEPRVAAIIASHEHPEFIV------------NVKETGKVLLVNYKDIDNLTVTSIG 204
Query: 451 HEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELLQTFYGHSNEVSKVLDIAFDYSG 510
+ D +D S TA+++ L
Sbjct: 205 AAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY 264
Query: 511 SKLATASSDQTAKLWTVGG--------AVELLQTFYGHSNEVSKVSFHPTGKLVL----- 557
+ + S + +G A + + G + HP +
Sbjct: 265 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTF 324
Query: 558 --SGSQDTTCRLWSTESGECIQVLKAHEDD---------VFSCGFNYNGDTII-----TA 601
+ ++ ++ + + + V +N GD +
Sbjct: 325 NPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGK 384
Query: 602 SKDNTCCIW 610
+ + +
Sbjct: 385 NDSSALVVV 393
Score = 52.3 bits (124), Expect = 1e-07
Identities = 21/210 (10%), Positives = 50/210 (23%), Gaps = 15/210 (7%)
Query: 419 NFSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANL 478
+ N + G L D + + V SG L D ++
Sbjct: 29 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDM 87
Query: 479 W-TVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTF 537
+ S Y + G +E Q
Sbjct: 88 IDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 147
Query: 538 YGHSNEVSKVSFHPTGKL-VLSGSQDTTCRLWSTESGECIQVLK------------AHED 584
V ++HP ++ + S + + + + + ++
Sbjct: 148 STRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAP 207
Query: 585 DVFSCGFNYNGDTIITASKDNTCCIWRSMN 614
+ G++ + +TA+ ++
Sbjct: 208 FLADGGWDSSHRYFMTAANNSNKVAVIDSK 237
Score = 42.6 bits (99), Expect = 1e-04
Identities = 13/120 (10%), Positives = 26/120 (21%), Gaps = 9/120 (7%)
Query: 503 DIAFDYSGSKLA--TASSDQTAKLWTVGGAVELLQTFYGHSNEVSKVSFHPTGKLVLSGS 560
D L T L ++++ V +G+ +L
Sbjct: 23 KQLNDLDLPNLFSVTLRDAGQIALVDGDSK-KIVKVIDTG-YAVHISRMSASGRYLLVIG 80
Query: 561 QDTTCRLWSTESGEC-----IQVLKAHEDDVFSCGFNYNGDTIITASKDNTCCIWRSMNR 615
+D + + E I++ S Y I +
Sbjct: 81 RDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 140
Score = 35.7 bits (81), Expect = 0.014
Identities = 18/131 (13%), Positives = 36/131 (27%), Gaps = 31/131 (23%)
Query: 212 KLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCL--------TGSYDRTCKLWDIKSGHEI 263
K + ++ +G + L ++ ++D+K+
Sbjct: 286 KNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 345
Query: 264 CTYRGHQNV---------VYAVAFSEPYGDKILTGSF-------------DKTLKLWASA 301
V ++ GD++ + DKTLKL A
Sbjct: 346 YQVLPIAEWADLGEGAKRVVQPEYN-KRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVV 404
Query: 302 KEECIQTYRGH 312
K+ + T G
Sbjct: 405 KDPRLITPTGK 415
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 57.2 bits (136), Expect = 2e-09
Identities = 24/281 (8%), Positives = 76/281 (27%), Gaps = 27/281 (9%)
Query: 325 FCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSD-RNMLITGSFDSSIVVWDIQ- 382
+ + S + + S + T+ + P+ S D + + + + + + D
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTAT 63
Query: 383 --------------YQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASS 428
+ + + + ++ S ++ + + + +
Sbjct: 64 NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLAL 123
Query: 429 SLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLWTVGGAVELL 488
S DG + V++ K + D T ++ +
Sbjct: 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183
Query: 489 QTFYGHSNEVSKVLDIAF--------DYSGSKLATASSDQTAKLWTVGGAVELLQTFYGH 540
++ + V A + + + + G ++
Sbjct: 184 VIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG 243
Query: 541 SNEVSKVSFHPTGK-LVLSGSQDTTCRLWSTESGECIQVLK 580
+ + ++ P GK + ++ S T + T + +
Sbjct: 244 PD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 49.5 bits (116), Expect = 5e-07
Identities = 33/282 (11%), Positives = 70/282 (24%), Gaps = 23/282 (8%)
Query: 204 TGSYDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYG---CLTGSYDRTCKLWDIKSG 260
S + D+ S T N S P G + ++ + D +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSN-PMGAVIS-PDGTKVYVANAHSNDVSIIDTATN 64
Query: 261 HEICTYRGHQNVVYAVAFSEPYGDKILTGSFDKTLKLWASAKEE--CIQTYRGHSAEVTF 318
+ I T + + + + + ++ ++T +
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALS 124
Query: 319 SPDQSTFCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLITGSFDSSIVV 378
+ + + + D T + NT + ++T+ P + + SI V
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184
Query: 379 WDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSSLDGTAKLWD 438
D + I+ + T + D
Sbjct: 185 IDTVTNS--------------VIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230
Query: 439 VRTMCCFYTLKNHEDEVLDIAFDYSGSKL-ATASSDQTANLW 479
T + D IA G K+ S T ++
Sbjct: 231 TGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVI 271
Score = 43.7 bits (101), Expect = 4e-05
Identities = 15/153 (9%), Positives = 43/153 (28%), Gaps = 5/153 (3%)
Query: 207 YDRTCKLWDIKSGHEICTYRGHQNVVYAVAFSEPYGCLTGSYDRTCKLWDIKSGHEICTY 266
D+T + + + I T ++ + ++D + +
Sbjct: 136 GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195
Query: 267 RGHQNVVYAVAFSEPYGDKILTGSF--DKTLKLWASAKEECIQTYRGHSA--EVTFSPDQ 322
+ +A + +T T+ + + + + +PD
Sbjct: 196 VKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDG 255
Query: 323 ST-FCSCSMDHTARIFNTNSGQEMHTLKAHTGP 354
+ + S +T + +T + T+ P
Sbjct: 256 KKVYVALSFCNTVSVIDTATNTITATMAVGKNP 288
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 51.4 bits (123), Expect = 2e-07
Identities = 34/272 (12%), Positives = 59/272 (21%), Gaps = 62/272 (22%)
Query: 311 GHSAEVTFSPDQST-FCSCSMDHTARIFNTNSGQEMHTLKAHTGPVISLQFSSDRNMLIT 369
G+ +C A + + I N
Sbjct: 176 GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERI-AAAVKAGNFKTI 234
Query: 370 GSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFNFSNSMIASSS 429
G VV R + + IA+
Sbjct: 235 GD-SKVPVVDG----------------RGESEFTRYIPVPKNPHGLNTSPDGKYFIANGK 277
Query: 430 LDGTAKLWDVRTM-CCFYTLKNHEDEV----------LDIAFDYSGSKLATASSDQTANL 478
L T + + + F D + L FD G+ T D
Sbjct: 278 LSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCK 337
Query: 479 WTVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFY 538
W + A++ + + V+ + KL Q
Sbjct: 338 WNIADAIKH-----YNGDRVNYIRQ--------KLDV-------------------QYQP 365
Query: 539 GHSNEVSKVSFHPTGKLVLSGSQDTTCRLWST 570
GH++ S GK ++ S+ + R
Sbjct: 366 GHNHASLTESRDADGKWLVVLSKFSKDRFLPV 397
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 39.4 bits (90), Expect = 8e-04
Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 7/106 (6%)
Query: 515 TASSDQTAKLWTV--GGAVELLQTFYGHSNEVSKVSFHPTGK-LVLSGSQDTTCRLWSTE 571
+ Q +W + GA+ L Q +V + P + L + + +
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67
Query: 572 SGECIQVLKAHE---DDVFSCGFNYNGDTIITASKDNTCCIWRSMN 614
+ A + ++ G + S + +
Sbjct: 68 PDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 113
Score = 34.8 bits (78), Expect = 0.026
Identities = 20/226 (8%), Positives = 56/226 (24%), Gaps = 29/226 (12%)
Query: 191 TNITFDKFGTRCLTGSYDR---TCKLWDIKSGHEICTYRGHQNVVYAVAFSEP--YGCLT 245
T+I+ D G GSY+ + + + + ++ S +
Sbjct: 86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVP 145
Query: 246 GSYDRTCKLWDIKSGHEICTYRGHQNVVYA------VAFSEPYGDKILTGSFDKTLKLWA 299
L+ + + + + F + ++ +W
Sbjct: 146 ALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWE 205
Query: 300 SAKEECIQT-------------YRGHSAEVTFSPDQST-FCSCSMDHTARIFNTNSGQEM 345
+A++ +PD + +F+ + +
Sbjct: 206 LKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV 265
Query: 346 HTLKAHTGPVI---SLQFSSD-RNMLITGSFDSSIVVWDIQYQFGT 387
+ + + ++ G I V++I + G
Sbjct: 266 LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 311
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 32.7 bits (73), Expect = 0.10
Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 13/256 (5%)
Query: 360 FSSDRNMLITGSFDSSIVVWDIQYQFGTRNAYAESTYRASHKPIHILTGHSQEISNCLFN 419
++ ++++ + + I ++D + +F + P + +
Sbjct: 30 VNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER 89
Query: 420 FSNSMIASSSLDGTAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSDQTANLW 479
I + G + D G + ++
Sbjct: 90 SPTHQIQIYNQYG---------QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIF 140
Query: 480 TVGGAVELLQTFYGHSNEVSKVLDIAFDYSGSKLATASSDQTAKLWTVGGAVELLQTFYG 539
G V +G S + + + + + K++ G G
Sbjct: 141 DQNGNV---LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEG 197
Query: 540 HSNEVSKVSFHPTGKLVLSGSQDTTCRLWSTESGECIQVLKAHEDDVFSCGFNYNGD-TI 598
+N V + G+++++ + + T+ G+ I L++ D ++
Sbjct: 198 ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSV 257
Query: 599 ITASKDNTCCIWRSMN 614
+ ASKD I+R +
Sbjct: 258 VLASKDYRLYIYRYVQ 273
>d1myna_ g.3.7.4 (A:) Drosomycin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 44
Score = 28.0 bits (62), Expect = 0.29
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 202 CLTGSYDRTCKLWDIKSGHEICTYRGH 228
CL+G Y C +WD ++ +C G
Sbjct: 2 CLSGRYKGPCAVWDNETCRRVCKEEGR 28
Score = 28.0 bits (62), Expect = 0.29
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 243 CLTGSYDRTCKLWDIKSGHEICTYRGH 269
CL+G Y C +WD ++ +C G
Sbjct: 2 CLSGRYKGPCAVWDNETCRRVCKEEGR 28
>d1rh5a_ f.41.1.1 (A:) Preprotein translocase SecY subunit {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 422
Score = 28.0 bits (62), Expect = 4.1
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 148 PLITASVITQLEQS--IMKLQKKLKEGFAQRYEKFKML 183
P++TA +I QL I+++ + E A K+L
Sbjct: 76 PIVTAGIIMQLLVGSGIIQMDLSIPENRALFQGCQKLL 113
>d1yvwa1 a.204.1.4 (A:4-95) Phosphoribosyl-ATP pyrophosphatase HisE
{Bacillus cereus [TaxId: 1396]}
Length = 92
Score = 25.5 bits (56), Expect = 6.3
Identities = 5/41 (12%), Positives = 11/41 (26%)
Query: 433 TAKLWDVRTMCCFYTLKNHEDEVLDIAFDYSGSKLATASSD 473
T L+ + EV+ + ++ D
Sbjct: 22 TNYLFSKGEDKILKKIGEECAEVIIACKNNDKEEVVKEMVD 62
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.407
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,216,230
Number of extensions: 100658
Number of successful extensions: 892
Number of sequences better than 10.0: 1
Number of HSP's gapped: 365
Number of HSP's successfully gapped: 143
Length of query: 616
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 525
Effective length of database: 1,158,166
Effective search space: 608037150
Effective search space used: 608037150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.3 bits)