BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3641
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein HELT OS=Mus musculus
GN=Helt PE=1 SV=1
Length = 240
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%)
Query: 48 REDPMSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
+ P+SH++IEKRRRDR+N CL +L + +P K+ G++EK EI+EM +++++ LHS
Sbjct: 9 KRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSA 68
Query: 108 VCTR 111
R
Sbjct: 69 DFPR 72
>sp|Q6QB00|HELT_DANRE Hairy and enhancer of split-related protein helt OS=Danio rerio
GN=helt PE=2 SV=1
Length = 270
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 49/70 (70%)
Query: 38 QLLPEKKMLNREDPMSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMA 97
+++ K ++ P+SH++IEKRRRDR+N CL +L + +P K+ G++EK EI+EM
Sbjct: 48 EMMASKMKDRKKTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQNSGKLEKAEILEMT 107
Query: 98 IKHMKYLHSV 107
+++++ LHS
Sbjct: 108 VQYLRALHSA 117
>sp|Q2KIN4|HEY1_BOVIN Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Bos
taurus GN=HEY1 PE=2 SV=1
Length = 304
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P+ + K+G ++EK EI++M + H+K LH+
Sbjct: 56 IIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 107
>sp|Q9TSZ2|HEY1_CANFA Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Canis
familiaris GN=HEY1 PE=2 SV=1
Length = 304
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P+ + K+G ++EK EI++M + H+K LH+
Sbjct: 56 IIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 107
>sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Homo
sapiens GN=HEY1 PE=1 SV=1
Length = 304
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P+ + K+G ++EK EI++M + H+K LH+
Sbjct: 56 IIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 107
>sp|Q8AXV6|HEY1_DANRE Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Danio
rerio GN=hey1 PE=2 SV=1
Length = 317
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P+ + K+G ++EK EI++M + H+K LH+
Sbjct: 55 IIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHAA 106
>sp|Q66KK8|HEY1_XENTR Hairy/enhancer-of-split related with YRPW motif protein 1
OS=Xenopus tropicalis GN=hey1 PE=2 SV=1
Length = 300
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P+ + K+G ++EK EI++M + H+K LH+
Sbjct: 55 IIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 106
>sp|Q9I8A3|HEY1_XENLA Hairy/enhancer-of-split related with YRPW motif protein 1
OS=Xenopus laevis GN=hey1 PE=1 SV=1
Length = 294
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P+ + K+G ++EK EI++M + H+K LH+
Sbjct: 51 IIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 102
>sp|Q9WV93|HEY1_MOUSE Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Mus
musculus GN=Hey1 PE=1 SV=1
Length = 299
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P+ + K+G ++EK EI++M + H+K LH+
Sbjct: 56 IIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 107
>sp|Q9NQ87|HEYL_HUMAN Hairy/enhancer-of-split related with YRPW motif-like protein
OS=Homo sapiens GN=HEYL PE=2 SV=2
Length = 328
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 54 HR-IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVVCT 110
HR IIEKRRRDR+N+ L++L RL+P + K+G ++EK E+++M + H+K LH+ T
Sbjct: 47 HRGIIEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHATGGT 104
>sp|Q8AXV5|HEYL_DANRE Hairy/enhancer-of-split related with YRPW motif-like protein
OS=Danio rerio GN=heyl PE=2 SV=2
Length = 310
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 42/52 (80%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+N+ L++L RL+P+ + K+G ++EK EI++M + H+K LH++
Sbjct: 50 IIEKRRRDRINHSLSELRRLVPSAFEKQGSSKLEKAEILQMTVDHLKLLHAM 101
>sp|Q9QUS4|HEY2_MOUSE Hairy/enhancer-of-split related with YRPW motif protein 2 OS=Mus
musculus GN=Hey2 PE=1 SV=1
Length = 339
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P + K+G ++EK EI++M + H+K L +
Sbjct: 55 IIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQAT 106
>sp|Q9UBP5|HEY2_HUMAN Hairy/enhancer-of-split related with YRPW motif protein 2 OS=Homo
sapiens GN=HEY2 PE=1 SV=1
Length = 337
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P + K+G ++EK EI++M + H+K L +
Sbjct: 55 IIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQAT 106
>sp|Q2NL18|HEYL_BOVIN Hairy/enhancer-of-split related with YRPW motif-like protein OS=Bos
taurus GN=HEYL PE=2 SV=3
Length = 328
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVVCT 110
IIEKRRRDR+N+ L++L RL+P + K+G ++EK E+++M + H+K LH+ T
Sbjct: 50 IIEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHATGGT 104
>sp|Q9I9L0|HEY2_DANRE Hairy/enhancer-of-split related with YRPW motif protein 2 OS=Danio
rerio GN=hey2 PE=2 SV=2
Length = 324
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSV 107
IIEKRRRDR+NN L++L RL+P + K+G ++EK EI++M + H+K L +
Sbjct: 55 IIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQAT 106
>sp|Q9DBX7|HEYL_MOUSE Hairy/enhancer-of-split related with YRPW motif-like protein OS=Mus
musculus GN=Heyl PE=1 SV=2
Length = 326
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 40/51 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHS 106
IIEKRRRDR+N+ L++L RL+P + K+G ++EK E+++M + H+K LH+
Sbjct: 50 IIEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHA 100
>sp|Q7KM13|HEY_DROME Hairy/enhancer-of-split related with YRPW motif protein
OS=Drosophila melanogaster GN=Hey PE=2 SV=1
Length = 425
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHS 106
+IEK+RRDR+N+ L +L RL+P+ Y K+G ++EK EI+++ ++H+K L S
Sbjct: 107 VIEKKRRDRINSSLTELKRLVPSAYEKQGSAKLEKAEILQLTVEHLKSLQS 157
>sp|O35779|BHE41_RAT Class E basic helix-loop-helix protein 41 OS=Rattus norvegicus
GN=Bhlhb3 PE=2 SV=2
Length = 410
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 43 KKMLNREDP-----MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMA 97
K+ L R+D + HR+IEK+RRDR+N C+A L L+P G +EK ++E+
Sbjct: 33 KRSLKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELT 92
Query: 98 IKHMKYLHSVV 108
+KH+K L ++
Sbjct: 93 LKHLKALTALT 103
>sp|Q99PV5|BHE41_MOUSE Class E basic helix-loop-helix protein 41 OS=Mus musculus
GN=Bhlhe41 PE=2 SV=1
Length = 410
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 43 KKMLNREDP-----MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMA 97
K+ L R+D + HR+IEK+RRDR+N C+A L L+P G +EK ++E+
Sbjct: 33 KRSLKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELT 92
Query: 98 IKHMKYLHSVV 108
+KH+K L ++
Sbjct: 93 LKHLKALTALT 103
>sp|Q9C0J9|BHE41_HUMAN Class E basic helix-loop-helix protein 41 OS=Homo sapiens
GN=BHLHE41 PE=2 SV=1
Length = 482
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 43 KKMLNREDP-----MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMA 97
K+ + R+D + HR+IEK+RRDR+N C+A L L+P G +EK ++E+
Sbjct: 33 KRSMKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELT 92
Query: 98 IKHMKYLHSVV 108
+KH+K L ++
Sbjct: 93 LKHLKALTALT 103
>sp|O35780|BHE40_RAT Class E basic helix-loop-helix protein 40 OS=Rattus norvegicus
GN=Bhlhe40 PE=2 SV=1
Length = 411
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 52 MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+ HR+IEK+RRDR+N C+A L L+P G +EK ++E+ +KH+K L +++
Sbjct: 55 LPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLI 111
>sp|B3F209|BHE40_SHEEP Class E basic helix-loop-helix protein 40 OS=Ovis aries GN=BHLHE40
PE=2 SV=1
Length = 412
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 52 MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+ HR+IEK+RRDR+N C+A L L+P G +EK ++E+ +KH+K L +++
Sbjct: 55 LPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLI 111
>sp|O14503|BHE40_HUMAN Class E basic helix-loop-helix protein 40 OS=Homo sapiens
GN=BHLHE40 PE=1 SV=1
Length = 412
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 52 MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+ HR+IEK+RRDR+N C+A L L+P G +EK ++E+ +KH+K L +++
Sbjct: 55 LPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLI 111
>sp|Q5EA15|BHE40_BOVIN Class E basic helix-loop-helix protein 40 OS=Bos taurus GN=BHLHE40
PE=2 SV=1
Length = 412
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 52 MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+ HR+IEK+RRDR+N C+A L L+P G +EK ++E+ +KH+K L +++
Sbjct: 55 LPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLI 111
>sp|O35185|BHE40_MOUSE Class E basic helix-loop-helix protein 40 OS=Mus musculus
GN=Bhlhe40 PE=1 SV=1
Length = 411
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 52 MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+ HR+IEK+RRDR+N C+A L L+P G +EK ++E+ +KH+K L +++
Sbjct: 55 LPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLI 111
>sp|Q5RAI7|BHE40_PONAB Class E basic helix-loop-helix protein 40 OS=Pongo abelii
GN=BHLHE40 PE=2 SV=1
Length = 412
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 52 MSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+ HR+IEK+RRDR+N C+A L L+P G +EK ++E+ +KH+K L +++
Sbjct: 55 LPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLI 111
>sp|A6NFD8|HELT_HUMAN Hairy and enhancer of split-related protein HELT OS=Homo sapiens
GN=HELT PE=2 SV=1
Length = 327
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 41/98 (41%)
Query: 51 PMSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGR------------------------- 85
P+SH++IEKRRRDR+N CL +L + +P K+G
Sbjct: 56 PVSHKVIEKRRRDRINRCLNELGKTVPMALAKQGEPQEALAQIRSRVRSLVLSSATVPDQ 115
Query: 86 ----------------GRIEKTEIIEMAIKHMKYLHSV 107
G++EK EI+EM +++++ LHS
Sbjct: 116 QALGRCEGPFLLLQSSGKLEKAEILEMTVQYLRALHSA 153
>sp|Q6PBD4|HES4_XENTR Transcription factor HES-4 OS=Xenopus tropicalis GN=hes4 PE=2 SV=1
Length = 281
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVC 109
S I+EKRRR R+N L L LI D LKK R +EK +I+EM +KH++ L V
Sbjct: 38 SKPIMEKRRRARINESLGQLKTLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQM 96
Query: 110 TRTPNANPS 118
T A+PS
Sbjct: 97 TAALTADPS 105
>sp|Q90VV1|HES4B_XENLA Transcription factor HES-4-B OS=Xenopus laevis GN=hes4-b PE=1 SV=1
Length = 277
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 35 NQAQLLPEKKMLNREDPMSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKT 91
N AQ + K + S I+EKRRR R+N L L LI D LKK R +EK
Sbjct: 20 NSAQTPDKPKSASEHRKSSKPIMEKRRRARINESLGQLKTLI-LDALKKDSSRHSKLEKA 78
Query: 92 EIIEMAIKHMKYLHSVVCTRTPNANPS 118
+I+EM +KH++ L V T A+PS
Sbjct: 79 DILEMTVKHLRNLQRVQMTAALTADPS 105
>sp|Q90Z12|HES4A_XENLA Transcription factor HES-4-A OS=Xenopus laevis GN=hes4-a PE=1 SV=2
Length = 281
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 35 NQAQLLPEKKMLNREDPMSHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKT 91
N AQ + K + S I+EKRRR R+N L L LI D LKK R +EK
Sbjct: 20 NSAQTPDKPKSASEHRKSSKPIMEKRRRARINESLGQLKTLI-LDALKKDSSRHSKLEKA 78
Query: 92 EIIEMAIKHMKYLHSVVCTRTPNANPS 118
+I+EM +KH++ L V T ++PS
Sbjct: 79 DILEMTVKHLRNLQRVQMTAALTSDPS 105
>sp|Q8AVU4|HES1B_XENLA Transcription factor HES-1-B OS=Xenopus laevis GN=hes1-b PE=2 SV=1
Length = 267
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVC 109
S I+EKRRR R+N L L LI D LKK R +EK +I+EM +KH++ L V
Sbjct: 38 SKPIMEKRRRARINESLGQLKTLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQM 96
Query: 110 TRTPNANPS 118
T + +PS
Sbjct: 97 TAALSTDPS 105
>sp|Q5PPM5|HES1_XENTR Transcription factor HES-1 OS=Xenopus tropicalis GN=hes1 PE=2 SV=1
Length = 267
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVC 109
S I+EKRRR R+N L L LI D LKK R +EK +I+EM +KH++ L V
Sbjct: 38 SKPIMEKRRRARINESLGQLKTLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQM 96
Query: 110 TRTPNANPS 118
T + +PS
Sbjct: 97 TAALSTDPS 105
>sp|Q9HCC6|HES4_HUMAN Transcription factor HES-4 OS=Homo sapiens GN=HES4 PE=1 SV=1
Length = 221
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVCTRT 112
++EKRRR R+N LA L LI D L+K R +EK +I+EM ++H++ L V T
Sbjct: 41 VMEKRRRARINESLAQLKTLI-LDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTAA 99
Query: 113 PNANPS 118
+A+P+
Sbjct: 100 LSADPA 105
>sp|Q6IRB2|HES1A_XENLA Transcription factor HES-1-A OS=Xenopus laevis GN=hes1-a PE=1 SV=1
Length = 267
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVC 109
S I+EKRRR R+N L L LI D LKK R +EK +I+EM +KH++ L V
Sbjct: 38 SKPIMEKRRRARINESLGQLKTLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQM 96
Query: 110 TRTPNANPS 118
+ + +PS
Sbjct: 97 SAALSTDPS 105
>sp|Q04666|HES1_RAT Transcription factor HES-1 OS=Rattus norvegicus GN=Hes1 PE=1 SV=1
Length = 281
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVCTRT 112
I+EKRRR R+N L+ L LI D LKK R +EK +I+EM +KH++ L T
Sbjct: 41 IMEKRRRARINESLSQLKTLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAA 99
Query: 113 PNANPS 118
+ +PS
Sbjct: 100 LSTDPS 105
>sp|Q14469|HES1_HUMAN Transcription factor HES-1 OS=Homo sapiens GN=HES1 PE=1 SV=1
Length = 280
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVCTRT 112
I+EKRRR R+N L+ L LI D LKK R +EK +I+EM +KH++ L T
Sbjct: 41 IMEKRRRARINESLSQLKTLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAA 99
Query: 113 PNANPS 118
+ +PS
Sbjct: 100 LSTDPS 105
>sp|Q3ZBG4|HES1_BOVIN Transcription factor HES-1 OS=Bos taurus GN=HES1 PE=2 SV=1
Length = 280
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVCTRT 112
I+EKRRR R+N L+ L LI D LKK R +EK +I+EM +KH++ L T
Sbjct: 41 IMEKRRRARINESLSQLKTLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAA 99
Query: 113 PNANPS 118
+ +PS
Sbjct: 100 LSTDPS 105
>sp|O57337|HES1_CHICK Transcription factor HES-1 OS=Gallus gallus GN=HES1 PE=2 SV=1
Length = 290
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVC 109
S I+EKRRR R+N L L LI D LKK R +EK +I+EM +KH++ L
Sbjct: 39 SKPIMEKRRRARINESLGQLKMLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQM 97
Query: 110 TRTPNANPS 118
+A+PS
Sbjct: 98 AAALSADPS 106
>sp|P35428|HES1_MOUSE Transcription factor HES-1 OS=Mus musculus GN=Hes1 PE=1 SV=1
Length = 282
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLHSVVCTRT 112
I+EKRRR R+N L+ L LI D LKK R +EK +I+EM +KH++ L T
Sbjct: 41 IMEKRRRARINESLSQLKTLI-LDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAA 99
Query: 113 PNANPS 118
+ +PS
Sbjct: 100 LSTDPS 105
>sp|P29303|HAIR_DROVI Protein hairy OS=Drosophila virilis GN=h PE=2 SV=1
Length = 378
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYL 104
I+EKRRR R+NNCL +L LI D KK R +EK +I+E +KH++ L
Sbjct: 44 IMEKRRRARINNCLNELKTLI-LDATKKDPARHSKLEKADILEKTVKHLQEL 94
>sp|P14003|HAIR_DROME Protein hairy OS=Drosophila melanogaster GN=h PE=1 SV=2
Length = 337
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYL 104
I+EKRRR R+NNCL +L LI D KK R +EK +I+E +KH++ L
Sbjct: 38 IMEKRRRARINNCLNELKTLI-LDATKKDPARHSKLEKADILEKTVKHLQEL 88
>sp|Q26263|DPN_DROME Protein deadpan OS=Drosophila melanogaster GN=dpn PE=1 SV=2
Length = 435
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 56 IIEKRRRDRMNNCLADLSRLIPADYLKKGRGR---IEKTEIIEMAIKHMKYLH 105
I+EKRRR R+N+CL +L LI + +KK R +EK +I+EM +KH++ +
Sbjct: 47 IMEKRRRARINHCLNELKSLI-LEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98
>sp|Q91YA9|BMAL1_NANGA Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Nannospalax galili GN=Arntl PE=1 SV=1
Length = 626
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+H IEKRRRD+MN+ + +L+ L+P +++K ++ MA++HMK L
Sbjct: 76 AHSQIEKRRRDKMNSFIDELASLVPT--CNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
>sp|A0MLS5|BMAL1_HORSE Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Equus caballus GN=ARNTL PE=2 SV=1
Length = 626
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+H IEKRRRD+MN+ + +L+ L+P +++K ++ MA++HMK L
Sbjct: 76 AHSQIEKRRRDKMNSFIDELASLVPT--CNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
>sp|Q6YGZ5|BMAL1_TYTAL Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Tyto alba GN=ARNTL PE=2 SV=1
Length = 633
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+H IEKRRRD+MN+ + +L+ L+P +++K ++ MA++HMK L
Sbjct: 83 AHSQIEKRRRDKMNSFIDELASLVPT--CNAMSRKLDKLTVLRMAVQHMKTLRGAT 136
>sp|Q9I8T7|BMAL1_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Gallus gallus GN=ARNTL PE=1 SV=1
Length = 633
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+H IEKRRRD+MN+ + +L+ L+P +++K ++ MA++HMK L
Sbjct: 83 AHSQIEKRRRDKMNSFIDELASLVPT--CNAMSRKLDKLTVLRMAVQHMKTLRGAT 136
>sp|O88529|BMAL1_MESAU Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Mesocricetus auratus GN=ARNTL PE=2 SV=1
Length = 626
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+H IEKRRRD+MN+ + +L+ L+P +++K ++ MA++HMK L
Sbjct: 76 AHSQIEKRRRDKMNSFIDELASLVPT--CNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
>sp|Q9WTL8|BMAL1_MOUSE Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Mus musculus GN=Arntl PE=1 SV=2
Length = 632
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+H IEKRRRD+MN+ + +L+ L+P +++K ++ MA++HMK L
Sbjct: 83 AHSQIEKRRRDKMNSFIDELASLVPT--CNAMSRKLDKLTVLRMAVQHMKTLRGAT 136
>sp|O00327|BMAL1_HUMAN Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Homo sapiens GN=ARNTL PE=1 SV=2
Length = 626
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+H IEKRRRD+MN+ + +L+ L+P +++K ++ MA++HMK L
Sbjct: 76 AHSQIEKRRRDKMNSFIDELASLVPT--CNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
>sp|Q9EPW1|BMAL1_RAT Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Rattus norvegicus GN=Arntl PE=2 SV=4
Length = 626
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 53 SHRIIEKRRRDRMNNCLADLSRLIPADYLKKGRGRIEKTEIIEMAIKHMKYLHSVV 108
+H IEKRRRD+MN+ + +L+ L+P +++K ++ MA++HMK L
Sbjct: 76 AHSQIEKRRRDKMNSFIDELASLVPT--CNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,800,806
Number of Sequences: 539616
Number of extensions: 3401888
Number of successful extensions: 10151
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 9955
Number of HSP's gapped (non-prelim): 285
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)