Query psy3650
Match_columns 435
No_of_seqs 230 out of 3597
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 22:09:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z86_A Chondroitin synthase; G 100.0 3.1E-44 1E-48 362.6 32.5 382 7-408 123-570 (625)
2 3f1y_A Mannosyl-3-phosphoglyce 100.0 3.6E-29 1.2E-33 234.2 14.9 211 199-412 93-311 (387)
3 3bcv_A Putative glycosyltransf 100.0 1.6E-28 5.3E-33 217.8 18.2 204 198-410 3-225 (240)
4 3ckj_A Putative uncharacterize 99.9 3.3E-26 1.1E-30 211.8 20.5 211 197-414 45-268 (329)
5 1qg8_A Protein (spore coat pol 99.9 7.9E-27 2.7E-31 208.7 15.6 194 200-409 1-213 (255)
6 1xhb_A Polypeptide N-acetylgal 99.9 5E-27 1.7E-31 228.8 15.1 214 197-414 26-262 (472)
7 2d7i_A Polypeptide N-acetylgal 99.9 2.8E-26 9.5E-31 227.4 13.3 210 198-412 110-340 (570)
8 2ffu_A Ppgalnact-2, polypeptid 99.9 2.5E-25 8.6E-30 218.1 15.6 207 198-412 64-292 (501)
9 4fix_A UDP-galactofuranosyl tr 99.9 1.4E-24 4.8E-29 216.6 17.7 218 196-416 176-423 (657)
10 4hg6_A Cellulose synthase subu 99.9 1.8E-23 6.2E-28 214.5 19.9 230 197-433 137-392 (802)
11 2bo4_A Mannosylglycerate synth 99.9 4.1E-23 1.4E-27 192.6 20.1 196 203-405 2-212 (397)
12 3l7i_A Teichoic acid biosynthe 99.9 2.9E-25 9.8E-30 227.0 0.0 203 199-409 1-205 (729)
13 2z86_A Chondroitin synthase; G 99.9 5E-23 1.7E-27 207.6 14.8 212 198-415 91-335 (625)
14 3bcv_A Putative glycosyltransf 99.9 9.7E-22 3.3E-26 173.9 14.6 177 2-181 29-221 (240)
15 3f1y_A Mannosyl-3-phosphoglyce 99.9 5E-22 1.7E-26 185.9 9.2 179 4-185 123-309 (387)
16 2nxv_A ATP synthase subunits r 99.8 2.4E-20 8.3E-25 165.3 13.0 185 198-414 14-208 (249)
17 2bo4_A Mannosylglycerate synth 99.8 5.8E-20 2E-24 171.3 14.7 166 6-179 27-211 (397)
18 1qg8_A Protein (spore coat pol 99.8 5.6E-20 1.9E-24 164.1 11.1 169 2-182 25-211 (255)
19 3ckj_A Putative uncharacterize 99.8 7.8E-20 2.7E-24 169.0 9.9 174 7-184 78-263 (329)
20 1xhb_A Polypeptide N-acetylgal 99.8 1.4E-19 4.9E-24 176.1 10.1 179 8-187 62-260 (472)
21 2zu9_A Mannosyl-3-phosphoglyce 99.8 4E-18 1.4E-22 155.9 18.5 220 200-433 51-332 (394)
22 2d7i_A Polypeptide N-acetylgal 99.8 2.6E-19 8.9E-24 177.4 8.7 177 8-187 145-340 (570)
23 2fy7_A Beta-1,4-galactosyltran 99.8 4.2E-18 1.4E-22 152.7 12.5 161 199-412 64-235 (287)
24 2ffu_A Ppgalnact-2, polypeptid 99.8 2.1E-18 7.3E-23 168.9 10.7 173 8-185 99-290 (501)
25 3l7i_A Teichoic acid biosynthe 99.7 5.8E-19 2E-23 180.5 0.0 171 2-177 26-197 (729)
26 4fix_A UDP-galactofuranosyl tr 99.7 6.4E-17 2.2E-21 161.5 12.3 177 6-185 211-417 (657)
27 2wvl_A Mannosyl-3-phosphoglyce 99.7 6.9E-16 2.4E-20 136.5 15.3 173 199-383 52-269 (391)
28 4hg6_A Cellulose synthase subu 99.6 1.4E-15 5E-20 156.0 12.4 175 3-180 165-363 (802)
29 2zu9_A Mannosyl-3-phosphoglyce 99.5 2.6E-13 8.9E-18 124.2 13.0 164 5-172 75-283 (394)
30 2nxv_A ATP synthase subunits r 99.4 2.7E-13 9.2E-18 119.9 8.8 138 8-179 47-198 (249)
31 2wvl_A Mannosyl-3-phosphoglyce 99.4 1.1E-12 3.7E-17 116.3 7.7 165 2-172 74-284 (391)
32 2fy7_A Beta-1,4-galactosyltran 99.0 3.3E-10 1.1E-14 101.4 7.4 104 47-178 112-221 (287)
33 1fo8_A Alpha-1,3-mannosyl-glyc 98.8 1.9E-08 6.4E-13 91.6 9.3 108 200-310 2-124 (343)
34 3lw6_A FI08434P, beta-4-galact 98.4 1.6E-06 5.4E-11 74.8 11.4 151 198-403 49-205 (287)
35 2c0n_A A197; thermophil protei 98.4 5.5E-08 1.9E-12 78.6 1.4 115 273-400 37-166 (203)
36 2c0n_A A197; thermophil protei 98.2 3.9E-07 1.3E-11 73.7 2.3 131 33-178 24-169 (203)
37 1fo8_A Alpha-1,3-mannosyl-glyc 97.7 2.1E-05 7E-10 71.6 4.5 75 7-86 32-125 (343)
38 3k8d_A 3-deoxy-manno-octuloson 96.9 0.0024 8.2E-08 56.1 7.9 194 199-404 16-242 (264)
39 3tqd_A 3-deoxy-manno-octuloson 96.7 0.0034 1.2E-07 54.8 7.3 160 234-404 51-235 (256)
40 4ecm_A Glucose-1-phosphate thy 95.7 0.026 9E-07 49.6 7.8 139 260-403 97-236 (269)
41 3oam_A 3-deoxy-manno-octuloson 95.6 0.17 5.8E-06 43.9 12.6 174 214-403 29-225 (252)
42 3cu0_A Galactosylgalactosylxyl 95.6 0.08 2.7E-06 45.6 9.7 103 197-306 18-153 (281)
43 4fcu_A 3-deoxy-manno-octuloson 94.7 1.4 4.6E-05 38.1 15.3 155 234-404 44-227 (253)
44 1v84_A Galactosylgalactosylxyl 94.5 0.19 6.6E-06 42.8 8.9 102 199-307 2-128 (253)
45 1qwj_A Cytidine monophospho-N- 94.2 0.47 1.6E-05 40.3 11.2 50 272-321 80-131 (229)
46 3lw6_A FI08434P, beta-4-galact 94.2 0.093 3.2E-06 45.4 6.5 115 36-178 85-205 (287)
47 2d0j_A Galactosylgalactosylxyl 94.2 0.49 1.7E-05 40.1 10.7 102 199-307 2-122 (246)
48 1h7e_A 3-deoxy-manno-octuloson 94.0 0.82 2.8E-05 39.1 12.6 98 211-320 26-125 (245)
49 1ezi_A CMP-N-acetylneuraminic 93.8 0.19 6.5E-06 42.7 7.9 52 270-321 79-133 (228)
50 2waw_A MOBA relate protein; un 93.7 0.27 9.2E-06 40.6 8.5 79 234-320 48-129 (199)
51 2y6p_A 3-deoxy-manno-octuloson 93.7 0.82 2.8E-05 38.8 11.8 87 213-314 28-115 (234)
52 3st8_A Bifunctional protein GL 93.4 0.25 8.6E-06 47.7 8.9 191 205-406 34-237 (501)
53 4fce_A Bifunctional protein GL 92.6 0.28 9.5E-06 46.7 7.8 179 211-405 35-221 (459)
54 3ngw_A Molybdopterin-guanine d 92.4 1.6 5.3E-05 36.4 11.3 95 210-321 24-119 (208)
55 3juk_A UDP-glucose pyrophospho 92.2 0.42 1.5E-05 42.0 7.9 142 260-404 95-248 (281)
56 1vgw_A 4-diphosphocytidyl-2C-m 92.1 4.3 0.00015 34.1 14.1 93 211-314 33-133 (231)
57 1e5k_A Molybdopterin-guanine d 92.0 0.59 2E-05 38.7 8.2 48 271-320 77-125 (201)
58 3d5n_A Q97W15_sulso; NESG, SSR 91.8 0.39 1.3E-05 39.7 6.8 50 271-321 71-122 (197)
59 1hm9_A GLMU, UDP-N-acetylgluco 91.8 0.27 9.2E-06 46.9 6.6 178 212-404 39-226 (468)
60 2wee_A MOBA-related protein; u 91.7 0.37 1.3E-05 39.6 6.6 96 211-319 30-128 (197)
61 3k8d_A 3-deoxy-manno-octuloson 91.4 0.7 2.4E-05 40.2 8.3 81 8-96 59-143 (264)
62 3oam_A 3-deoxy-manno-octuloson 91.0 1.6 5.4E-05 37.6 10.1 81 8-96 43-127 (252)
63 1vic_A 3-deoxy-manno-octuloson 90.8 2.4 8.3E-05 36.6 11.3 96 211-319 26-125 (262)
64 1omz_A Alpha-1,4-N-acetylhexos 90.4 0.21 7.1E-06 43.8 3.8 114 199-320 27-141 (293)
65 3ngw_A Molybdopterin-guanine d 89.9 1.3 4.3E-05 37.0 8.2 79 9-96 40-119 (208)
66 2y6p_A 3-deoxy-manno-octuloson 89.5 1.1 3.9E-05 37.8 7.9 55 35-90 61-116 (234)
67 2yc3_A 2-C-methyl-D-erythritol 89.2 3.8 0.00013 34.3 11.0 44 271-314 81-127 (228)
68 3tqd_A 3-deoxy-manno-octuloson 88.6 1.6 5.4E-05 37.8 8.1 79 8-94 50-133 (256)
69 1yp2_A Glucose-1-phosphate ade 88.5 9.9 0.00034 35.7 14.5 49 271-320 118-169 (451)
70 1h7e_A 3-deoxy-manno-octuloson 87.7 3 0.0001 35.4 9.5 81 8-96 44-126 (245)
71 2ux8_A Glucose-1-phosphate uri 87.5 1.3 4.6E-05 39.1 7.3 55 261-315 107-163 (297)
72 2e3d_A UTP--glucose-1-phosphat 87.5 3.3 0.00011 36.6 9.9 60 260-320 102-168 (302)
73 2qh5_A PMI, ALGA, mannose-6-ph 87.4 2.9 0.0001 37.2 9.4 106 206-321 31-143 (308)
74 4ecm_A Glucose-1-phosphate thy 87.2 2 6.9E-05 37.3 8.1 62 35-97 97-158 (269)
75 3f1c_A Putative 2-C-methyl-D-e 87.2 10 0.00035 32.2 12.5 96 211-315 31-135 (246)
76 3cu0_A Galactosylgalactosylxyl 87.0 0.91 3.1E-05 39.1 5.4 70 7-81 51-153 (281)
77 1qwj_A Cytidine monophospho-N- 86.9 2.9 9.8E-05 35.3 8.7 51 46-96 79-131 (229)
78 1i52_A 4-diphosphocytidyl-2-C- 86.8 2.6 8.9E-05 35.7 8.5 44 271-314 83-128 (236)
79 1v84_A Galactosylgalactosylxyl 85.5 0.94 3.2E-05 38.6 4.7 72 6-82 32-128 (253)
80 2waw_A MOBA relate protein; un 84.7 0.87 3E-05 37.4 4.3 79 8-94 47-128 (199)
81 3pnn_A Conserved domain protei 84.7 2.9 9.8E-05 37.1 7.9 106 206-320 26-152 (303)
82 2d0j_A Galactosylgalactosylxyl 84.4 1.6 5.3E-05 37.1 5.5 71 7-82 33-122 (246)
83 1vgw_A 4-diphosphocytidyl-2C-m 84.2 7.8 0.00027 32.4 10.2 75 8-89 51-133 (231)
84 1fxo_A Glucose-1-phosphate thy 84.0 3.3 0.00011 36.6 7.9 104 206-318 28-133 (293)
85 2vsh_A TARI, 2-C-methyl-D-eryt 83.8 6.3 0.00021 33.1 9.5 44 271-314 84-135 (236)
86 3juk_A UDP-glucose pyrophospho 83.4 1.8 6.2E-05 37.9 6.0 56 35-90 95-154 (281)
87 2v0h_A Bifunctional protein GL 83.3 3.3 0.00011 39.1 8.2 89 212-312 33-123 (456)
88 2xwl_A 2-C-methyl-D-erythritol 83.0 9.4 0.00032 31.7 10.2 88 211-310 29-118 (223)
89 4fcu_A 3-deoxy-manno-octuloson 82.6 5.2 0.00018 34.4 8.4 78 8-93 43-125 (253)
90 1e5k_A Molybdopterin-guanine d 82.1 3.9 0.00013 33.6 7.3 48 46-95 77-125 (201)
91 2wee_A MOBA-related protein; u 82.0 1.2 4.1E-05 36.5 4.0 48 45-94 78-128 (197)
92 2e8b_A Probable molybdopterin- 81.7 12 0.00042 30.5 10.2 96 199-307 12-120 (201)
93 2dpw_A Hypothetical protein TT 81.6 5.2 0.00018 33.7 8.0 88 210-321 30-118 (232)
94 3st8_A Bifunctional protein GL 81.5 7.3 0.00025 37.3 9.9 89 8-97 56-148 (501)
95 1lvw_A Glucose-1-phosphate thy 80.9 6.6 0.00023 34.6 8.7 103 206-318 29-134 (295)
96 1ezi_A CMP-N-acetylneuraminic 80.8 1.9 6.6E-05 36.3 5.0 52 45-96 79-133 (228)
97 3rsb_A Adenosylcobinamide-phos 80.1 1.4 4.6E-05 36.2 3.7 92 211-312 26-119 (196)
98 1w55_A ISPD/ISPF bifunctional 79.7 3.6 0.00012 37.7 6.6 44 270-313 73-117 (371)
99 2qh5_A PMI, ALGA, mannose-6-ph 79.6 6.3 0.00021 35.0 8.2 62 36-97 78-144 (308)
100 3f1c_A Putative 2-C-methyl-D-e 79.2 6.7 0.00023 33.4 8.0 81 8-93 49-138 (246)
101 3q80_A 2-C-methyl-D-erythritol 79.0 16 0.00055 30.7 10.1 185 211-429 34-229 (231)
102 3q80_A 2-C-methyl-D-erythritol 78.9 6.3 0.00022 33.3 7.6 41 47-87 82-127 (231)
103 1hm9_A GLMU, UDP-N-acetylgluco 77.5 2.6 8.8E-05 40.0 5.2 55 42-96 81-138 (468)
104 2e3d_A UTP--glucose-1-phosphat 77.2 5.6 0.00019 35.1 7.1 60 35-95 102-168 (302)
105 1mc3_A Glucose-1-phosphate thy 76.5 5.8 0.0002 35.0 6.9 104 206-319 29-135 (296)
106 2j0a_A Beta-1,3-N-acetylglucos 76.1 4.9 0.00017 35.1 6.2 110 284-404 92-211 (280)
107 3d5n_A Q97W15_sulso; NESG, SSR 75.3 4.4 0.00015 33.2 5.5 51 45-96 70-122 (197)
108 1vic_A 3-deoxy-manno-octuloson 75.2 7.2 0.00025 33.5 7.1 35 60-94 90-125 (262)
109 4fce_A Bifunctional protein GL 74.8 3 0.0001 39.4 4.9 49 39-87 76-126 (459)
110 1fxo_A Glucose-1-phosphate thy 74.7 8.7 0.0003 33.7 7.6 59 35-93 75-133 (293)
111 3brk_X Glucose-1-phosphate ade 74.5 27 0.00093 32.3 11.4 51 271-322 108-161 (420)
112 1tzf_A Glucose-1-phosphate cyt 74.4 29 0.001 29.3 10.9 48 269-317 104-152 (259)
113 2pa4_A UTP-glucose-1-phosphate 74.3 8.1 0.00028 34.5 7.4 143 261-405 106-261 (323)
114 2gak_A Beta-1,6-N-acetylglucos 74.0 15 0.00051 33.8 9.2 106 199-309 83-198 (391)
115 2px7_A 2-C-methyl-D-erythritol 73.7 11 0.00037 31.8 7.7 44 271-314 91-135 (236)
116 3rsb_A Adenosylcobinamide-phos 73.4 0.7 2.4E-05 38.0 0.0 50 36-87 69-119 (196)
117 2yc3_A 2-C-methyl-D-erythritol 73.1 8 0.00027 32.3 6.7 77 8-90 49-128 (228)
118 3pnn_A Conserved domain protei 73.1 10 0.00036 33.4 7.7 51 44-95 99-152 (303)
119 3tzt_A Glycosyl transferase fa 72.8 25 0.00086 30.4 10.0 106 199-308 3-122 (276)
120 2ux8_A Glucose-1-phosphate uri 72.8 4.2 0.00014 35.8 5.1 55 36-90 107-163 (297)
121 2vsh_A TARI, 2-C-methyl-D-eryt 72.5 6.4 0.00022 33.0 6.0 46 45-90 83-136 (236)
122 2xwl_A 2-C-methyl-D-erythritol 72.1 9.3 0.00032 31.7 6.9 40 46-85 77-118 (223)
123 1i52_A 4-diphosphocytidyl-2-C- 71.8 5.9 0.0002 33.4 5.6 44 46-89 83-128 (236)
124 1lvw_A Glucose-1-phosphate thy 71.6 21 0.00074 31.2 9.4 58 35-93 76-134 (295)
125 1mc3_A Glucose-1-phosphate thy 64.7 21 0.00071 31.4 7.8 58 36-94 77-135 (296)
126 2x65_A Mannose-1-phosphate gua 61.8 31 0.0011 30.9 8.5 107 206-321 28-140 (336)
127 2dpw_A Hypothetical protein TT 61.3 16 0.00053 30.7 6.1 51 43-96 67-118 (232)
128 2v0h_A Bifunctional protein GL 61.2 9.3 0.00032 35.9 5.2 52 41-94 75-128 (456)
129 3cgx_A Putative nucleotide-dip 57.7 19 0.00065 30.5 6.0 53 43-97 82-138 (242)
130 2pa4_A UTP-glucose-1-phosphate 56.0 14 0.00047 33.0 5.1 55 36-90 106-163 (323)
131 2j0a_A Beta-1,3-N-acetylglucos 54.8 12 0.00042 32.5 4.4 108 59-177 92-209 (280)
132 1tzf_A Glucose-1-phosphate cyt 53.3 34 0.0012 28.9 7.1 50 44-94 104-154 (259)
133 4evw_A Nucleoside-diphosphate- 52.0 62 0.0021 27.4 8.4 177 213-404 31-224 (255)
134 2xme_A CTP-inositol-1-phosphat 51.5 13 0.00045 31.1 4.0 84 213-308 46-130 (232)
135 2i5e_A Hypothetical protein MM 50.9 16 0.00055 30.1 4.4 47 46-97 74-121 (211)
136 2px7_A 2-C-methyl-D-erythritol 48.6 18 0.00063 30.3 4.5 45 45-89 90-135 (236)
137 2i5e_A Hypothetical protein MM 47.7 79 0.0027 25.7 8.2 47 271-322 74-121 (211)
138 1yp2_A Glucose-1-phosphate ade 46.3 67 0.0023 29.9 8.4 49 46-95 118-169 (451)
139 3brk_X Glucose-1-phosphate ade 45.9 1E+02 0.0035 28.3 9.6 51 46-97 108-161 (420)
140 2xme_A CTP-inositol-1-phosphat 45.7 13 0.00045 31.1 3.1 70 8-83 60-130 (232)
141 1g9r_A Glycosyl transferase; a 44.5 37 0.0013 29.9 6.0 93 214-308 11-117 (311)
142 2e8b_A Probable molybdopterin- 42.8 33 0.0011 27.9 5.0 39 44-82 80-120 (201)
143 2i5k_A UTP--glucose-1-phosphat 39.0 1.7E+02 0.0058 27.6 9.8 110 207-320 116-259 (488)
144 1vpa_A 2-C-methyl-D-erythritol 37.2 36 0.0012 28.3 4.5 43 47-89 90-136 (234)
145 1jyk_A LICC protein, CTP:phosp 36.7 76 0.0026 26.8 6.6 82 213-306 57-138 (254)
146 3cgx_A Putative nucleotide-dip 35.1 73 0.0025 26.8 6.1 52 269-322 83-138 (242)
147 2icy_A Probable UTP-glucose-1- 33.6 1.6E+02 0.0053 27.7 8.5 113 206-321 102-247 (469)
148 1w55_A ISPD/ISPF bifunctional 33.5 37 0.0013 30.9 4.2 45 45-89 73-118 (371)
149 4evw_A Nucleoside-diphosphate- 33.4 83 0.0028 26.6 6.3 71 8-80 47-125 (255)
150 1vpa_A 2-C-methyl-D-erythritol 33.4 54 0.0019 27.1 5.0 94 210-314 39-136 (234)
151 2x65_A Mannose-1-phosphate gua 25.7 1.2E+02 0.0043 26.8 6.2 55 42-96 80-140 (336)
152 2l8b_A Protein TRAI, DNA helic 24.2 1.1E+02 0.0038 24.6 4.8 48 6-53 120-168 (189)
153 4gqo_A LMO0859 protein; virule 22.9 2.3E+02 0.0079 25.7 7.8 135 247-403 47-191 (433)
154 1ll2_A Glycogenin-1; protein-s 20.2 3E+02 0.01 24.3 7.5 17 285-301 94-110 (333)
No 1
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=100.00 E-value=3.1e-44 Score=362.58 Aligned_cols=382 Identities=16% Similarity=0.139 Sum_probs=273.2
Q ss_pred CeEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCC-CCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHHHH
Q psy3650 7 PYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKK-KLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQ 85 (435)
Q Consensus 7 ~~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~-n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~~~ 85 (435)
++|||||||||+|+|.++++++.+. + .+.++..+. +.|+++++|.|++.|+||||+++|+|+.++|++|+.+++.+
T Consensus 123 ~~eiivvDd~s~d~t~~~~~~~~~~-~--~i~~i~~~~~~~g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~ 199 (625)
T 2z86_A 123 DYEVIVADDGSKENIEEIVREFESL-L--NIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELL 199 (625)
T ss_dssp CEEEEEEEESCSSCHHHHHHTTTTT-S--CEEEEEECCCSCCHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHH
T ss_pred CeEEEEEeCCCchhHHHHHHHhhhc-C--CeEEEEeCCCCcchhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHH
Confidence 6999999999999999999988543 3 344444333 45799999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEeeeecCCCccCc-------ccchhh----h-------------hchHHHHHHHHh-----CCCccccccc
Q psy3650 86 QQENLDVVTGTRYVGTGGVYGW-------DFKRKL----V-------------SRGANYLTQLLL-----RPGVSDLTGS 136 (435)
Q Consensus 86 ~~~~~~~v~g~~~~~~~~~~~~-------~~~~~~----~-------------~~~~~~~~~~~~-----~~~~~~~~~~ 136 (435)
.+++...++|.+.......... .+.... . ............ ........|+
T Consensus 200 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (625)
T 2z86_A 200 AVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGG 279 (625)
T ss_dssp HHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTT
T ss_pred hcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeec
Confidence 8777778888765443322100 000000 0 000000000000 1112235677
Q ss_pred eehhhHHHHHHhhccccccC-c-hhhHHHHHHHHhhcceeEeeeeEeeeccccee-------------------------
Q psy3650 137 FRLYKKQVLENLVSSCVSKG-Y-VFQMEMVIRARQYNYTIGEVPISFVDRVVFTT------------------------- 189 (435)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~-~-~~d~~l~~r~~~~g~~~~~~~~~~~~r~~~~~------------------------- 189 (435)
+.++++++++++|++..... | .+|.++++|+.++|+++..+|.....+.....
T Consensus 280 ~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 359 (625)
T 2z86_A 280 NVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKENETDRAAGKNITVQLLQQKVPYF 359 (625)
T ss_dssp EEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGGCEEEECCC----------------CTTTTTCTTT
T ss_pred eeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcccchhhccCCccccchhhhhhcccchhhhcccCcceE
Confidence 88999999999976654433 3 68999999999999999887654322221110
Q ss_pred ----eee-ecCCCCCcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEE
Q psy3650 190 ----QAI-MSGDSVKNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVL 264 (435)
Q Consensus 190 ----~~~-~~~~~~~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~ 264 (435)
... ......+|+||||||+||+++.+.++|+++.. |+++++|||||||||+|+|.++++++.+.++. +.+
T Consensus 360 ~rk~~~~~~~~~~~~~~vsiii~~yn~~~~l~~~l~s~~~---q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~--i~~ 434 (625)
T 2z86_A 360 YRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALN---QTITDLEVCICDDGSTDDTLRILQEHYANHPR--VRF 434 (625)
T ss_dssp TCCCCCTTTCCCCSSCSEEEEEEESSCTTTHHHHHHHHHS---SSCCSEEEEEEEESCSSSHHHHHHHHHTTCTT--EEE
T ss_pred EecccccccchhccCCeEEEEEeCCCCHHHHHHHHHHHHh---CcCCCeEEEEEECcCChhHHHHHHHHHhhCCc--EEE
Confidence 000 01112357899999999999999999988754 77889999999999999999999998777665 444
Q ss_pred ecCCCCCCHHHHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHh-cCCCceEEeeeEECC-Cc-eeccch-hHHHHH
Q psy3650 265 KPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQ-QENLDVVTGTRYVGT-GG-VYGWDF-KRKLVS 340 (435)
Q Consensus 265 ~~~~~n~g~~~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~-~~-~~~~~~-~~~~~~ 340 (435)
+. .+|.|++.|+|.|++.|+||||+++|+|+.+.|++|+.++..+. +++.++|.+.....+ .+ .....+ +..+..
T Consensus 435 ~~-~~n~G~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (625)
T 2z86_A 435 IS-QKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSR 513 (625)
T ss_dssp EE-ECCCCHHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCSSCCH
T ss_pred Ee-CCCCCHHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccccCCH
Confidence 44 67999999999999999999999999999999999999999885 456777777544322 22 111000 000000
Q ss_pred HHHHHHHHHhcCCCccccccceeeecHHHHHHhhhcccCcccchhhHHHHHHHHCCCcEEEeeeEEee
Q psy3650 341 RGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLVSSCVSKGYVFQMEMVIRARQYNYTIGEVPISFVD 408 (435)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~D~el~lr~~~~G~~i~~~p~~~~~ 408 (435)
. .. . .....|++++++|++++++|++.+...+.+|+|+++|+.+.| ++.++|....+
T Consensus 514 ---~----~~-~--~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~ 570 (625)
T 2z86_A 514 ---E----KL-T--SAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYN 570 (625)
T ss_dssp ---H----HH-T--TSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEE
T ss_pred ---H----HH-h--hcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEE
Confidence 0 01 1 123456778999999999988777666789999999999999 99999976654
No 2
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.96 E-value=3.6e-29 Score=234.19 Aligned_cols=211 Identities=16% Similarity=0.179 Sum_probs=159.8
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHH
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYM 278 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n 278 (435)
.|++|||||+||+++.|.++|+++.+.+.+...++|||||||||+|+|.++++++........+.++..++|.|++.|+|
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A~n 172 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDAMW 172 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHHHH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHHHH
Confidence 68999999999999999999999987666665689999999999999999998874321111122345667999999999
Q ss_pred HHHhhccCCEEEEEeCCCC-CCCccHHHHHHHHhcC-CCceEEeeeEECCCc--eeccchhHHHHHHHHHHHHHHhcC--
Q psy3650 279 HGLKYATGNFIIIMDADLS-HHPKFIPEMIKLQQQE-NLDVVTGTRYVGTGG--VYGWDFKRKLVSRGANYLTQLLLR-- 352 (435)
Q Consensus 279 ~g~~~a~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~-~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-- 352 (435)
.|++.|+||||+++|+|.. ++|++|..++..+.++ ++++|.|.+...... .................+.+..+.
T Consensus 173 ~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~~~~~l 252 (387)
T 3f1y_A 173 RALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLFYPEL 252 (387)
T ss_dssp HHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHHHHHHHHCGGG
T ss_pred HHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhHHHHHHHHhHhh
Confidence 9999999999999999999 8999999999999654 799999987543211 110111222222222222222221
Q ss_pred CCccccccceeeecHHHHHHhhhcccCcccchhhHHHHHH-HHCCCc-EEEeeeEEeecccc
Q psy3650 353 PGVSDLTGSFRLYKKQVLENLVSSCVSKGYVFQMEMVIRA-RQYNYT-IGEVPISFVDRVYG 412 (435)
Q Consensus 353 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~D~el~lr~-~~~G~~-i~~~p~~~~~~~~~ 412 (435)
..+.+++||+++|+|++++++. +..+|.+|.++++++ .+.|++ |.++|+.++.|.+.
T Consensus 253 ~~~~d~~sG~~a~rR~~l~~i~---f~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~~ 311 (387)
T 3f1y_A 253 AGFVQPLAGEFVADRELFCSIP---FLTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRHQ 311 (387)
T ss_dssp TTCSCTTCSCEEEEHHHHTTSC---EECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCCC
T ss_pred ccccccccccEEEEHHHHHhCC---CCCCcchHHHHHHHHHHhcCCCeEEEEecceeecCCC
Confidence 2577889999999999999993 247899999999997 566997 99999999776543
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.96 E-value=1.6e-28 Score=217.77 Aligned_cols=204 Identities=23% Similarity=0.267 Sum_probs=147.1
Q ss_pred CCcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHH
Q psy3650 198 VKNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAY 277 (435)
Q Consensus 198 ~~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~ 277 (435)
..|+||||||+||+++.|+++|+++.+ |.++++|||||||||+|+|.++++++.++++. +.++. .+|.|.+.|+
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~---q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~--i~~i~-~~n~G~~~a~ 76 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLA---QTLSDIEIILIDDESPDNCPKICDDYAAQYPN--IKVIH-KKNAGLGMAC 76 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHT---CSSSSEEEEEEECCCSSSHHHHHHHHHHHCSS--EEEEE-CCCCCHHHHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHh---CcCCCeEEEEEECCCCcCHHHHHHHHHhhCCC--EEEEE-CCCCChHHHH
Confidence 468999999999999999999998865 77789999999999999999999999988875 44554 4699999999
Q ss_pred HHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECC-Cce----ec-----cchhHHHHHHHHHHHH
Q psy3650 278 MHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGT-GGV----YG-----WDFKRKLVSRGANYLT 347 (435)
Q Consensus 278 n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~-~~~----~~-----~~~~~~~~~~~~~~~~ 347 (435)
|.|++.|+||||+|+|+|+.++|++|+.++..+.+++.+++.+...... .+. .. ...+.. ..... +.
T Consensus 77 N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~ 153 (240)
T 3bcv_A 77 NSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNK--NEIHT-LL 153 (240)
T ss_dssp HHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSH--HHHHH-HH
T ss_pred HHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCH--HHHHH-HH
Confidence 9999999999999999999999999999999998767888876543322 110 00 000110 01111 11
Q ss_pred HHhcCCCc-------cccccceeeecHHHHHHhh-hcccCc-ccchhhHHHHHHHHCCCcEEEeeeEEeecc
Q psy3650 348 QLLLRPGV-------SDLTGSFRLYKKQVLENLV-SSCVSK-GYVFQMEMVIRARQYNYTIGEVPISFVDRV 410 (435)
Q Consensus 348 ~~~~~~~~-------~~~~~~~~~~~r~~~~~~~-~~~~~~-~~~~D~el~lr~~~~G~~i~~~p~~~~~~~ 410 (435)
....+... ...++++++++|++++++| ++.+.. .+.+|+++++|+..+|+++.++|....+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~yr 225 (240)
T 3bcv_A 154 KDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYNYR 225 (240)
T ss_dssp GGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-------
T ss_pred HHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEEEE
Confidence 11222110 1134677899999999987 555442 356999999999999999999997665443
No 4
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.94 E-value=3.3e-26 Score=211.83 Aligned_cols=211 Identities=18% Similarity=0.222 Sum_probs=152.4
Q ss_pred CCCcceEEEEeccCCCCChHHHHHHHHHHhhcCCC-CeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEe-cCCCCCCHH
Q psy3650 197 SVKNKYTVLLPTYNEKENLPIIVYLITKYMDEGNY-PYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLK-PRKKKLGLG 274 (435)
Q Consensus 197 ~~~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~-~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~-~~~~n~g~~ 274 (435)
...|+||||||+||+++.+.++|+++.+ |.++ .+|||||||||+|+|.++++++...... ++.++ ..++|.|++
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~---q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~-~~~~~~~~~~n~G~~ 120 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISP---LVDGLVDELIVLDSGSTDDTEIRAVAAGARVVS-REQALPEVPIRPGKG 120 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGG---GBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEE-HHHHCTTSCCCCSHH
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHH---hhCCCCcEEEEEeCCCCchHHHHHHHhhhhhcc-ceeeeccCCCCCCHH
Confidence 3468999999999999999999998865 4444 4899999999999999998886332100 11122 267899999
Q ss_pred HHHHHHHhhccCCEEEEEeCCCC-CCCccHHHHHHHH-hcCCCceEEeeeEECC--Cceec---cchhHHHHHHHHHHHH
Q psy3650 275 TAYMHGLKYATGNFIIIMDADLS-HHPKFIPEMIKLQ-QQENLDVVTGTRYVGT--GGVYG---WDFKRKLVSRGANYLT 347 (435)
Q Consensus 275 ~a~n~g~~~a~~d~v~~~d~D~~-~~~~~l~~~~~~~-~~~~~~~v~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~ 347 (435)
.|+|.|++.|+||||+++|+|+. ++|++|..++..+ .++++++|+|.+.... ++... ..............+.
T Consensus 121 ~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (329)
T 3ckj_A 121 EALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLL 200 (329)
T ss_dssp HHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHHHH
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHHHH
Confidence 99999999999999999999999 8999999999985 4567899999876543 11000 0001111111111112
Q ss_pred HHhcC--CCccccccceeeecHHHHHHhhhcccCcccchhhHHHHHHHH-CCCc-EEEeeeEEeecccccc
Q psy3650 348 QLLLR--PGVSDLTGSFRLYKKQVLENLVSSCVSKGYVFQMEMVIRARQ-YNYT-IGEVPISFVDRVYGES 414 (435)
Q Consensus 348 ~~~~~--~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~D~el~lr~~~-~G~~-i~~~p~~~~~~~~~~s 414 (435)
..... ..+.++.|++++|+|+++++++ +..+|.+|+|+++++.+ .|++ +.++|+.++.|..+.+
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~rr~~l~~i~---f~~~~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h~~s~~ 268 (329)
T 3ckj_A 201 AALRPELGCILQPLGGEYAATRELLTSVP---FAPGYGVEIGLLVDTFDRLGLDAIAQVNLGVREHRNRPL 268 (329)
T ss_dssp HHHCGGGGGCSCTTCSCEEEEHHHHTTSC---BCCGGGHHHHHHHHHHHHHCGGGEEEEEEEECEECCCCG
T ss_pred HHhhhhhccccCCCccceeeeHHHHHhCC---CCCCCcccHHHHHHHHHhcCCccEeeecceEEecCCCcH
Confidence 11111 2345678888999999999995 34677899999999876 7876 9999998877755543
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.94 E-value=7.9e-27 Score=208.74 Aligned_cols=194 Identities=12% Similarity=0.137 Sum_probs=149.5
Q ss_pred cceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCC--------CCC
Q psy3650 200 NKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRK--------KKL 271 (435)
Q Consensus 200 ~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~--------~n~ 271 (435)
|+||||||+||+++.++++|+++.+ |.++++|||||||||+|+|.++++++.. .+ ++.++..+ +|.
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~---q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~--~i~~i~~~~~~~~~~~~n~ 74 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILS---QTFSDFELFIMDDNSNEETLNVIRPFLN-DN--RVRFYQSDISGVKERTEKT 74 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHT---CSCCCEEEEEEECSCCHHHHHHHGGGGG-ST--TEEEEECCCCSHHHHHSSC
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHh---ccCCceEEEEEECCCCchHHHHHHHHhh-cC--CEEEEeccccccccccccc
Confidence 6799999999999999999998865 7778999999999999999999998865 44 46666666 799
Q ss_pred CHHHHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcC-CCceEEeeeEEC--C-CceeccchhHHHHHHHHHHHH
Q psy3650 272 GLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQE-NLDVVTGTRYVG--T-GGVYGWDFKRKLVSRGANYLT 347 (435)
Q Consensus 272 g~~~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~-~~~~v~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~ 347 (435)
|.+.|+|.|++.|+||||+++|+|+.++|++|+.++..+.+. +.++|.+..... + .+...........
T Consensus 75 G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-------- 146 (255)
T 1qg8_A 75 RYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAA-------- 146 (255)
T ss_dssp HHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCC--------
T ss_pred CHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchH--------
Confidence 999999999999999999999999999999999999999754 788888876543 2 2111000000000
Q ss_pred HHhcCCCccccccceeeecHHHHHHhh-hc------ccCcccchhhHHHHHHHHCCCcEEEeeeEEeec
Q psy3650 348 QLLLRPGVSDLTGSFRLYKKQVLENLV-SS------CVSKGYVFQMEMVIRARQYNYTIGEVPISFVDR 409 (435)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~------~~~~~~~~D~el~lr~~~~G~~i~~~p~~~~~~ 409 (435)
...........+++++++|+++++++ ++ .....+.+|+++++|+...| ++.++|.....+
T Consensus 147 -~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~ 213 (255)
T 1qg8_A 147 -QVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLN 213 (255)
T ss_dssp -SCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEE
T ss_pred -HHHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEE
Confidence 00112223456778999999999997 55 34455679999999999987 699999765443
No 6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.94 E-value=5e-27 Score=228.76 Aligned_cols=214 Identities=15% Similarity=0.177 Sum_probs=158.4
Q ss_pred CCCcceEEEEeccCCC-CChHHHHHHHHHHhhcCCCC--eEEEEEeCCCCcc-hHHHHHHHHHHhCCceEEEecCCCCCC
Q psy3650 197 SVKNKYTVLLPTYNEK-ENLPIIVYLITKYMDEGNYP--YEIIVIDDGSPDG-TLDAAKQLQSIYGSEKIVLKPRKKKLG 272 (435)
Q Consensus 197 ~~~~~isivip~~n~~-~~l~~~l~~l~~~~~~~~~~--~eiivvdd~s~d~-t~~~~~~~~~~~~~~~i~~~~~~~n~g 272 (435)
...|++|||||+||++ +.+.++|+++.+ |.+++ +|||||||+|+|+ |.++++++.+.+|. +++++..++|.|
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~---q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~-~v~vi~~~~n~G 101 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVIN---RSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKV-PVHVIRMEQRSG 101 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHH---SSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSS-CEEEEECSSCCC
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHh---cCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCC-cEEEEECCCCCC
Confidence 3478999999999999 999998888865 55555 6999999999994 99999999887762 466777888999
Q ss_pred HHHHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCceec-------------cchhHHHH
Q psy3650 273 LGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYG-------------WDFKRKLV 339 (435)
Q Consensus 273 ~~~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------------~~~~~~~~ 339 (435)
++.|+|.|++.|+||||+|+|+|+.++|++|+.++..+.+.+..++++.....+..... +.......
T Consensus 102 ~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (472)
T 1xhb_A 102 LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWY 181 (472)
T ss_dssp HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEE
T ss_pred hHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecc
Confidence 99999999999999999999999999999999999999877766666654332221110 00000000
Q ss_pred HHHHHHHHHHh----cCCCccccccceeeecHHHHHHhhhcccCcc-c-chhhHHHHHHHHCCCcEEEeeeEEeeccccc
Q psy3650 340 SRGANYLTQLL----LRPGVSDLTGSFRLYKKQVLENLVSSCVSKG-Y-VFQMEMVIRARQYNYTIGEVPISFVDRVYGE 413 (435)
Q Consensus 340 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~-~~D~el~lr~~~~G~~i~~~p~~~~~~~~~~ 413 (435)
........... .........|++++++|++|+++|++.+... + .||.||++|+.++|+++.++|.+.+.|..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~ 261 (472)
T 1xhb_A 182 PVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRK 261 (472)
T ss_dssp ECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC--
T ss_pred cCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccC
Confidence 00000011111 0222345678889999999999987765544 2 6899999999999999999999998887766
Q ss_pred c
Q psy3650 414 S 414 (435)
Q Consensus 414 s 414 (435)
+
T Consensus 262 ~ 262 (472)
T 1xhb_A 262 A 262 (472)
T ss_dssp -
T ss_pred c
Confidence 5
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.93 E-value=2.8e-26 Score=227.37 Aligned_cols=210 Identities=15% Similarity=0.146 Sum_probs=154.2
Q ss_pred CCcceEEEEeccCCC-CChHHHHHHHHHHhhcCCCC--eEEEEEeCCCCcch-HHHHHHHHHHhCCceEEEecCCCCCCH
Q psy3650 198 VKNKYTVLLPTYNEK-ENLPIIVYLITKYMDEGNYP--YEIIVIDDGSPDGT-LDAAKQLQSIYGSEKIVLKPRKKKLGL 273 (435)
Q Consensus 198 ~~~~isivip~~n~~-~~l~~~l~~l~~~~~~~~~~--~eiivvdd~s~d~t-~~~~~~~~~~~~~~~i~~~~~~~n~g~ 273 (435)
..|+||||||+||+. +.+.++|.++.+ |++++ +|||||||+|+|+| .++++++.+.++ +++++..++|.|+
T Consensus 110 ~~P~vSVIIp~yNe~~~~L~~~L~Sll~---qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~--~v~vi~~~~n~G~ 184 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEGWSSLLRTVHSVLN---RSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP--SVRILRTKKREGL 184 (570)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHH---HSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST--TEEEEECSSCCCH
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHHh---cCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC--eEEEEECCCCCCH
Confidence 468999999999998 888888887765 55555 49999999999999 899999988776 4666778889999
Q ss_pred HHHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCceeccch-----h-HHHHHHHH-HH-
Q psy3650 274 GTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDF-----K-RKLVSRGA-NY- 345 (435)
Q Consensus 274 ~~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----~-~~~~~~~~-~~- 345 (435)
+.|+|.|++.|+||||+|+|+|+.++|++|+.++..+.+++..+|++.....+.....+.. . ..+..... ..
T Consensus 185 ~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (570)
T 2d7i_A 185 IRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRI 264 (570)
T ss_dssp HHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCccccccccccccccc
Confidence 9999999999999999999999999999999999999876655554433222221100000 0 00000000 00
Q ss_pred -------HHHHhcCCCccccccceeeecHHHHHHhhhcccCccc--chhhHHHHHHHHCCCcEEEeeeEEeecccc
Q psy3650 346 -------LTQLLLRPGVSDLTGSFRLYKKQVLENLVSSCVSKGY--VFQMEMVIRARQYNYTIGEVPISFVDRVYG 412 (435)
Q Consensus 346 -------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~--~~D~el~lr~~~~G~~i~~~p~~~~~~~~~ 412 (435)
..............|+|++++|++|+++|++.+.... .||+||++|+.++|+++.++|.+.+.|..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r 340 (570)
T 2d7i_A 265 PIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYR 340 (570)
T ss_dssp CCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCC
T ss_pred ccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcc
Confidence 0000001123346789999999999999876655433 699999999999999999999988877533
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.93 E-value=2.5e-25 Score=218.09 Aligned_cols=207 Identities=18% Similarity=0.169 Sum_probs=151.0
Q ss_pred CCcceEEEEeccCCCC-ChHHHHHHHHHHhhcCCCC--eEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHH
Q psy3650 198 VKNKYTVLLPTYNEKE-NLPIIVYLITKYMDEGNYP--YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLG 274 (435)
Q Consensus 198 ~~~~isivip~~n~~~-~l~~~l~~l~~~~~~~~~~--~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~ 274 (435)
..|+||||||+||++. .|.++|.++.+ |.+++ +|||||||||+|+|.+. +.+..+ ++.++..++|.|++
T Consensus 64 ~~p~vSVIIp~yN~~~~~L~~~l~Sl~~---q~~~~~~~EIIvVDDgS~D~t~~~---~~~~~~--~v~vi~~~~n~G~~ 135 (501)
T 2ffu_A 64 DLPATSVVITFHNEARSALLRTVVSVLK---KSPPHLIKEIILVDDYSNDPEDGA---LLGKIE--KVRVLRNDRREGLM 135 (501)
T ss_dssp SCCCEEEEEEESSCCHHHHHHHHHHHHH---HSCGGGEEEEEEEECSCSCTHHHH---GGGGBT--TEEEEECSSCCHHH
T ss_pred CCCCEEEEEEeCcCcHHHHHHHHHHHHh---hCchhhceeEEEEECCCCchHHHH---HHhcCC--CEEEEECCCCcCHH
Confidence 4689999999999997 88888888866 44444 69999999999998543 234555 46677788899999
Q ss_pred HHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCcee-------------ccchhHHHHHH
Q psy3650 275 TAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVY-------------GWDFKRKLVSR 341 (435)
Q Consensus 275 ~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~-------------~~~~~~~~~~~ 341 (435)
.|+|.|++.|+||||+|+|+|+.++|++|+.++..+.+++.++|++.....+.... .+.....+...
T Consensus 136 ~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (501)
T 2ffu_A 136 RSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYM 215 (501)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccC
Confidence 99999999999999999999999999999999999988777777665433221100 00000000000
Q ss_pred HHHHHHHH----hcCCCccccccceeeecHHHHHHhhhcccCccc--chhhHHHHHHHHCCCcEEEeeeEEeecccc
Q psy3650 342 GANYLTQL----LLRPGVSDLTGSFRLYKKQVLENLVSSCVSKGY--VFQMEMVIRARQYNYTIGEVPISFVDRVYG 412 (435)
Q Consensus 342 ~~~~~~~~----~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~--~~D~el~lr~~~~G~~i~~~p~~~~~~~~~ 412 (435)
........ ..........|++++++|++|++++++.+...+ .||+||++|+.+.|+++.++|.+.+.|..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r 292 (501)
T 2ffu_A 216 TPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFR 292 (501)
T ss_dssp CHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCC
T ss_pred CHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEcc
Confidence 00001111 111223456788999999999999877655443 799999999999999999999887766533
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.92 E-value=1.4e-24 Score=216.56 Aligned_cols=218 Identities=16% Similarity=0.065 Sum_probs=151.7
Q ss_pred CCCCcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcch--HHHHHHHHHHhCCceEEEecCCCCCCH
Q psy3650 196 DSVKNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGT--LDAAKQLQSIYGSEKIVLKPRKKKLGL 273 (435)
Q Consensus 196 ~~~~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t--~~~~~~~~~~~~~~~i~~~~~~~n~g~ 273 (435)
....|+||||||+||+.+.+.++|+++.++........|||||||||+|++ ....+.+....+ ++.++.++ |.|.
T Consensus 176 ~~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~--~I~vI~~~-N~G~ 252 (657)
T 4fix_A 176 APGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGS--RLSIHDQP-NLGG 252 (657)
T ss_dssp CCSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGG--GEEEEECC-CCHH
T ss_pred CCCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCC--CEEEEECC-CCCH
Confidence 345689999999999999999999888652211115679999999999842 333333333334 57777777 9999
Q ss_pred HHHHHHHHhhcc----CCEEEEEeCCCCCCCccHHHHHHHHhcCCC-ceEEeeeEECCCc-e-------eccchh--HH-
Q psy3650 274 GTAYMHGLKYAT----GNFIIIMDADLSHHPKFIPEMIKLQQQENL-DVVTGTRYVGTGG-V-------YGWDFK--RK- 337 (435)
Q Consensus 274 ~~a~n~g~~~a~----~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~-~~v~~~~~~~~~~-~-------~~~~~~--~~- 337 (435)
+.|+|.|++.|. +|||+++|+|+.++|++|..++..++..+. ++|.|........ . ...... ..
T Consensus 253 a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (657)
T 4fix_A 253 SGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAA 332 (657)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccc
Confidence 999999999984 589999999999999999999999976544 4444444433321 0 000000 00
Q ss_pred --------H----HHHHHHHHHHHhcCCCccccccceeeecHHHHHHhhhcccCcccchhhHHHHHHHHCCCcEEEeeeE
Q psy3650 338 --------L----VSRGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLVSSCVSKGYVFQMEMVIRARQYNYTIGEVPIS 405 (435)
Q Consensus 338 --------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~D~el~lr~~~~G~~i~~~p~~ 405 (435)
+ ....................+|+|++++|++|+++|+......+.+|+|+|+|+.++|+++.++|-.
T Consensus 333 ~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p~a 412 (657)
T 4fix_A 333 PHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLPGA 412 (657)
T ss_dssp TTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEECCE
Confidence 0 0000000111122334556788899999999999987665566679999999999999999999999
Q ss_pred EeecccccccC
Q psy3650 406 FVDRVYGESKL 416 (435)
Q Consensus 406 ~~~~~~~~s~~ 416 (435)
.+.|..+.++.
T Consensus 413 ~V~H~~~~~~~ 423 (657)
T 4fix_A 413 AIWHMAWSDKD 423 (657)
T ss_dssp EEEECCSSSSC
T ss_pred EEEEcCcCccc
Confidence 98886665443
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.91 E-value=1.8e-23 Score=214.48 Aligned_cols=230 Identities=13% Similarity=0.147 Sum_probs=162.4
Q ss_pred CCCcceEEEEeccCCCCCh-HHHHHHHHHHhhcCCCC--eEEEEEeCCCCcchH---------------HHHHHHHHHhC
Q psy3650 197 SVKNKYTVLLPTYNEKENL-PIIVYLITKYMDEGNYP--YEIIVIDDGSPDGTL---------------DAAKQLQSIYG 258 (435)
Q Consensus 197 ~~~~~isivip~~n~~~~l-~~~l~~l~~~~~~~~~~--~eiivvdd~s~d~t~---------------~~~~~~~~~~~ 258 (435)
...|++||+||+||+++.+ +++++++.+ |.+++ +||+||||||+|+|. +.++++.+..+
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~---q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~ 213 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKN---MIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELG 213 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHT---SSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHh---ccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcC
Confidence 4568999999999999765 888888755 55655 899999999999983 34555555543
Q ss_pred CceEEEecCCC-CCCHHHHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHh-cCCCceEEeeeEECCCceecc--ch
Q psy3650 259 SEKIVLKPRKK-KLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQ-QENLDVVTGTRYVGTGGVYGW--DF 334 (435)
Q Consensus 259 ~~~i~~~~~~~-n~g~~~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~--~~ 334 (435)
+++ +..++ +.|++.|+|.|++.+++|||+++|+|+.++|+++.+++..+. +++.++|++.....+...... ..
T Consensus 214 -v~~--i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~ 290 (802)
T 4hg6_A 214 -VVY--STRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLAL 290 (802)
T ss_dssp -CEE--EECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTC
T ss_pred -cEE--EEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhH
Confidence 233 33334 478999999999999999999999999999999999999994 677888888776554331100 00
Q ss_pred hHHH---HHHHHHHHHHHhcCCCccccccceeeecHHHHHHhhhcccCcccchhhHHHHHHHHCCCcEEEeeeEEeeccc
Q psy3650 335 KRKL---VSRGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLVSSCVSKGYVFQMEMVIRARQYNYTIGEVPISFVDRVY 411 (435)
Q Consensus 335 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~D~el~lr~~~~G~~i~~~p~~~~~~~~ 411 (435)
+..+ ...+.................|++.++||++++++|++.. ..+.||.+++.|+.++|+++.++|....++..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~-~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~ 369 (802)
T 4hg6_A 291 GDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAG-ETITEDAETALEIHSRGWKSLYIDRAMIAGLQ 369 (802)
T ss_dssp CTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCC-SSSSHHHHHHHHHHTTTCCEEECCCCCEEECC
T ss_pred HhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCcCC-CCcchHHHHHHHHHHcCCeEEEecCCEEEecC
Confidence 0000 0111111111111112223578889999999999987553 44679999999999999999999987766654
Q ss_pred ccccCC-HHHHHHHHHHHHHHhh
Q psy3650 412 GESKLG-GTEIFQFAKALLYLFA 433 (435)
Q Consensus 412 ~~s~~~-~~~~~~~~~~~~~~f~ 433 (435)
..+-.. .++..|+..+.++.+.
T Consensus 370 p~t~~~~~~Qr~RW~~G~~q~l~ 392 (802)
T 4hg6_A 370 PETFASFIQQRGRWATGMMQMLL 392 (802)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHccHHHHHH
Confidence 444333 5667788777776653
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.91 E-value=4.1e-23 Score=192.56 Aligned_cols=196 Identities=12% Similarity=0.088 Sum_probs=139.5
Q ss_pred EEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhC---CceEEEecCC--C--CCCHHH
Q psy3650 203 TVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYG---SEKIVLKPRK--K--KLGLGT 275 (435)
Q Consensus 203 sivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~---~~~i~~~~~~--~--n~g~~~ 275 (435)
|+|||.+|++ .+..+++.+..... .+.+|||||||||+|+|.++++++..+.+ +++++..... + |.|++.
T Consensus 2 slVIiP~~eE-~I~~vl~~l~~~~~--~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~ 78 (397)
T 2bo4_A 2 SLVVFPFKHE-HPEVLLHNVRVAAA--HPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGD 78 (397)
T ss_dssp CEEEEECCSS-CHHHHHHHHHHHHH--STTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHH
T ss_pred cEEEEeCCcc-CHHHHHHHHHHhcc--CCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHH
Confidence 3444445543 68888888764322 34689999999999999999997665543 3455443322 4 899999
Q ss_pred HHHHHH----hhccCCEEEEEeCCCC-CCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHHHHHHHHHHHHh
Q psy3650 276 AYMHGL----KYATGNFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLL 350 (435)
Q Consensus 276 a~n~g~----~~a~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
|++.|+ +.++||+++++|+|.+ ++|+++.+|++.+.+ ++|+|.|.+.....+. ...+.+...+........
T Consensus 79 Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~---~~~~~~~~~ll~~~~~~~ 154 (397)
T 2bo4_A 79 GMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDA---MITWMITRTGFALLWPHT 154 (397)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSC---HHHHHTHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCc---HHHHHHHHHHHHHHHHHh
Confidence 999999 8889999999999996 899999999999865 6999999643321110 111111111111111111
Q ss_pred cCCCccccccceeeecHHHHHHhhhc---ccCcccchhhHHHHHHHHCCCcEEEeeeE
Q psy3650 351 LRPGVSDLTGSFRLYKKQVLENLVSS---CVSKGYVFQMEMVIRARQYNYTIGEVPIS 405 (435)
Q Consensus 351 ~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~~~~~D~el~lr~~~~G~~i~~~p~~ 405 (435)
....+.++.+|+++|+|++++.+... ....+|++|.++..++.++|+++.++|+.
T Consensus 155 ~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 155 ELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp SGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred hccccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 11256677889999999999998532 15678889999999999999999999974
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.89 E-value=2.9e-25 Score=227.05 Aligned_cols=203 Identities=14% Similarity=0.128 Sum_probs=0.0
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHH
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYM 278 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n 278 (435)
+|+||||||+||+++.|+++|+++.+ |+++++|||||||||+|+|.++++++.+.++. ++.++..++|.|.+.|+|
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~---Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~-~i~~i~~~~n~G~~~arN 76 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQ---QRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDK-NIRFIDLDENSGHAHARN 76 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHh---CCCCCeEEEEEECCCCCcHHHHHHHHHHhCCC-CEEEEECCCCCCHHHHHH
Confidence 47899999999999999999998865 66779999999999999999999999877542 677777788999999999
Q ss_pred HHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHHHHHHHHHHHHhcCCCcccc
Q psy3650 279 HGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLRPGVSDL 358 (435)
Q Consensus 279 ~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (435)
.|++.|+||||+++|+|+.+.|++|+.+++.+. +.+++++........................ ........+...
T Consensus 77 ~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~--~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 152 (729)
T 3l7i_A 77 IALEEVETPYFMFLDADDELASYAITFYLEKFN--NTDGLIAPIHSFTTQRPQFVDLDRVRVEYFN--AKENINSFLRKQ 152 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhccCCEEEEECCCCCCChhHHHHHHHHhc--CCCEEEEeeEEeecCCCccccccceeeeeec--chhhHHHHhhcc
Confidence 999999999999999999999999999999997 5566665543322211100000000000000 000001111234
Q ss_pred ccceeeecHHHHHHhh-hcccCcccchhhHHHHHHHHCCCcEEEe-eeEEeec
Q psy3650 359 TGSFRLYKKQVLENLV-SSCVSKGYVFQMEMVIRARQYNYTIGEV-PISFVDR 409 (435)
Q Consensus 359 ~~~~~~~~r~~~~~~~-~~~~~~~~~~D~el~lr~~~~G~~i~~~-p~~~~~~ 409 (435)
.+++++++|+++++++ ++.+...+.+|+++++|+..+|.++.++ |....++
T Consensus 153 ~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~~y 205 (729)
T 3l7i_A 153 SACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFYFR 205 (729)
T ss_dssp -----------------------------------------------------
T ss_pred chhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEEEE
Confidence 5566899999999997 5555556789999999999999999999 6655443
No 13
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.89 E-value=5e-23 Score=207.62 Aligned_cols=212 Identities=18% Similarity=0.196 Sum_probs=151.5
Q ss_pred CCcceEEEEeccCCCCChHHHHHHHHHHhhcCC-CCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCC-CCCHHH
Q psy3650 198 VKNKYTVLLPTYNEKENLPIIVYLITKYMDEGN-YPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKK-KLGLGT 275 (435)
Q Consensus 198 ~~~~isivip~~n~~~~l~~~l~~l~~~~~~~~-~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~-n~g~~~ 275 (435)
..|+||||||+||+.+.+.++|+++.. |.+ .++|||||||||+|+|.++++++... + .+.++..+. +.|++.
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~---q~~~~~~eiivvDd~s~d~t~~~~~~~~~~-~--~i~~i~~~~~~~g~~~ 164 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCN---QKTIYDYEVIVADDGSKENIEEIVREFESL-L--NIKYVRQKDYGYQLCA 164 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHT---CCCSSCEEEEEEEESCSSCHHHHHHTTTTT-S--CEEEEEECCCSCCHHH
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHh---hccCCCeEEEEEeCCCchhHHHHHHHhhhc-C--CeEEEEeCCCCcchhH
Confidence 458899999999999888888888765 433 48999999999999999999887443 3 344443432 346999
Q ss_pred HHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCceecc-------chhHH---------HH
Q psy3650 276 AYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGW-------DFKRK---------LV 339 (435)
Q Consensus 276 a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-------~~~~~---------~~ 339 (435)
|+|.|++.|+||||+++|+|+.++|++|..++..+.+.+..+++|.+.......... ..... +.
T Consensus 165 a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (625)
T 2z86_A 165 VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVA 244 (625)
T ss_dssp HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------
T ss_pred HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchh
Confidence 999999999999999999999999999999999998767777777765543221000 00000 00
Q ss_pred HH--------HHHHHHHH-----hcCCCccccccceeeecHHHHHHhhhcccCccc--chhhHHHHHHHHCCCcEEEeee
Q psy3650 340 SR--------GANYLTQL-----LLRPGVSDLTGSFRLYKKQVLENLVSSCVSKGY--VFQMEMVIRARQYNYTIGEVPI 404 (435)
Q Consensus 340 ~~--------~~~~~~~~-----~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~--~~D~el~lr~~~~G~~i~~~p~ 404 (435)
.. +....... ..........|+|++++|++|+++|++.+.... .+|.|+++|+.++|+++.++|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 324 (625)
T 2z86_A 245 GKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEG 324 (625)
T ss_dssp -------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGG
T ss_pred hhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEccc
Confidence 00 00000000 011223347888999999999999876655433 5999999999999999999998
Q ss_pred EEeeccccccc
Q psy3650 405 SFVDRVYGESK 415 (435)
Q Consensus 405 ~~~~~~~~~s~ 415 (435)
..+.|..+.+.
T Consensus 325 ~~v~H~~~~~~ 335 (625)
T 2z86_A 325 AMAYHQEPPGK 335 (625)
T ss_dssp GCEEEECCC--
T ss_pred chhhccCCccc
Confidence 66666554433
No 14
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.87 E-value=9.7e-22 Score=173.89 Aligned_cols=177 Identities=20% Similarity=0.184 Sum_probs=119.0
Q ss_pred CCCCCCeEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHH
Q psy3650 2 DEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEM 81 (435)
Q Consensus 2 ~~~~~~~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~ 81 (435)
+|+..++|||||||||+|+|.++++++.+++|++ .++. ++|.|.++++|.|++.|+||||+|+|+|+.++|++|+.+
T Consensus 29 ~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i--~~i~-~~n~G~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l 105 (240)
T 3bcv_A 29 AQTLSDIEIILIDDESPDNCPKICDDYAAQYPNI--KVIH-KKNAGLGMACNSGLDVATGEYVAFCDSDDYVDSDMYMTM 105 (240)
T ss_dssp TCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSE--EEEE-CCCCCHHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHH
T ss_pred hCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCE--EEEE-CCCCChHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHH
Confidence 3555569999999999999999999999888764 4443 579999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEEeeeecCCCc-----cC-cccchhhhhc-hHHHHHHHHhCCCc-------cccccceehhhHHHHHH
Q psy3650 82 IKLQQQENLDVVTGTRYVGTGGV-----YG-WDFKRKLVSR-GANYLTQLLLRPGV-------SDLTGSFRLYKKQVLEN 147 (435)
Q Consensus 82 ~~~~~~~~~~~v~g~~~~~~~~~-----~~-~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 147 (435)
++.+++++.+++++......... .. .......... .............. ....+++.+++|+++++
T Consensus 106 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 185 (240)
T 3bcv_A 106 YNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEK 185 (240)
T ss_dssp HHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHH
T ss_pred HHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHHH
Confidence 99998778888877643222111 00 0000000000 00000000111100 01224567999999999
Q ss_pred hh-ccccc-cCchhhHHHHHHHHhhcceeEeeeeEe
Q psy3650 148 LV-SSCVS-KGYVFQMEMVIRARQYNYTIGEVPISF 181 (435)
Q Consensus 148 ~~-~~~~~-~~~~~d~~l~~r~~~~g~~~~~~~~~~ 181 (435)
+| ++... ..+.+|+++++|+.+.|+++..+|...
T Consensus 186 ~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~ 221 (240)
T 3bcv_A 186 KHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTF 221 (240)
T ss_dssp TTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC---
T ss_pred cCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCe
Confidence 76 44433 235689999999999999998877653
No 15
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.86 E-value=5e-22 Score=185.86 Aligned_cols=179 Identities=16% Similarity=0.178 Sum_probs=129.7
Q ss_pred CCCCeEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCC-CCCCcHHHHH
Q psy3650 4 GNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPEMI 82 (435)
Q Consensus 4 ~~~~~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~-~~~~~l~~~~ 82 (435)
...++|||||||||+|+|.++++++.++.....++++..+.|.|++.|+|.|++.|+||||+++|+|+. ++|++|+.++
T Consensus 123 ~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~ 202 (387)
T 3f1y_A 123 APLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVL 202 (387)
T ss_dssp SCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTH
T ss_pred CCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHH
Confidence 345799999999999999999998854211111223356789999999999999999999999999999 8999999999
Q ss_pred HHHhcC-CCcEEEEeeeecCCC--ccCcccchhhhhchHHHHHHHHhC--CCccccccceehhhHHHHHHhhccccccCc
Q psy3650 83 KLQQQE-NLDVVTGTRYVGTGG--VYGWDFKRKLVSRGANYLTQLLLR--PGVSDLTGSFRLYKKQVLENLVSSCVSKGY 157 (435)
Q Consensus 83 ~~~~~~-~~~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
+.+.++ ++++|.|.+...... .................+...... ..+.+..+|+++|++++++.++ +..+|
T Consensus 203 ~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~~~~~l~~~~d~~sG~~a~rR~~l~~i~---f~~gy 279 (387)
T 3f1y_A 203 GPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLFYPELAGFVQPLAGEFVADRELFCSIP---FLTGY 279 (387)
T ss_dssp HHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHHHHHHHHCGGGTTCSCTTCSCEEEEHHHHTTSC---EECST
T ss_pred HHHHHCCCceEEEEeeccccccccccccccCCchhhhhHHHHHHHHhHhhccccccccccEEEEHHHHHhCC---CCCCc
Confidence 999764 799999987543211 111111112222222222222221 2577888999999999999983 34789
Q ss_pred hhhHHHHHHHH-hhcce-eEeeeeEeeecc
Q psy3650 158 VFQMEMVIRAR-QYNYT-IGEVPISFVDRV 185 (435)
Q Consensus 158 ~~d~~l~~r~~-~~g~~-~~~~~~~~~~r~ 185 (435)
.+|.++..++. +.|++ +.++|+.+..+.
T Consensus 280 g~e~ell~~~~~~~G~~~I~eVpi~~~~h~ 309 (387)
T 3f1y_A 280 AVETGIMIDVLKKVGLGAMAQVDLGERQNR 309 (387)
T ss_dssp THHHHHHHHHHHHHCGGGEEEEEEEECCCC
T ss_pred chHHHHHHHHHHhcCCCeEEEEecceeecC
Confidence 99999999984 56987 999998875543
No 16
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.83 E-value=2.4e-20 Score=165.30 Aligned_cols=185 Identities=9% Similarity=0.023 Sum_probs=121.5
Q ss_pred CCcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHH
Q psy3650 198 VKNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAY 277 (435)
Q Consensus 198 ~~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~ 277 (435)
.++.+||| |+||+.+.+++||+++.+.+..... +|||||||+|+|. .|.+.|+
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~-------------------------~g~a~a~ 66 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGNQ-------------------------FHGFSWH 66 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS-------------------------CCTTTHH
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc-------------------------ccHHHHH
Confidence 35689975 6799999999999988764432222 8999999999862 3678999
Q ss_pred HHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhc-----CCCceEEeeeEECCC-ceec-c-chhHHHHHHHHHHHHHH
Q psy3650 278 MHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQ-----ENLDVVTGTRYVGTG-GVYG-W-DFKRKLVSRGANYLTQL 349 (435)
Q Consensus 278 n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~-----~~~~~v~~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~ 349 (435)
|.|++.|+|||++|+|+|+.+++++|+.+++.+++ ++.+++.+....... +... . ...............
T Consensus 67 N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-- 144 (249)
T 2nxv_A 67 KQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSVTAQALHISDVFGNDRRRG-- 144 (249)
T ss_dssp HHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTSCCCEEEEEETTEEEEEES--
T ss_pred HHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCceeeecccccCCccccccccC--
Confidence 99999999999999999999999999999999875 444444332222221 1000 0 000000000000000
Q ss_pred hcCCCccccccceeeecHHHHHHhhhcccC-ccc-chhhHHHHHHHHCCCcEEEeeeEEeecccccc
Q psy3650 350 LLRPGVSDLTGSFRLYKKQVLENLVSSCVS-KGY-VFQMEMVIRARQYNYTIGEVPISFVDRVYGES 414 (435)
Q Consensus 350 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~~~-~~D~el~lr~~~~G~~i~~~p~~~~~~~~~~s 414 (435)
.....+..+.|+|++++|++ ++++.+. .+| .+|.|+|+|+.++|+++.++|....|...+.+
T Consensus 145 ~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~v~H~~~~~~ 208 (249)
T 2nxv_A 145 NVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFHLHHYGRAIA 208 (249)
T ss_dssp CSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCCCEECCCCCC
T ss_pred CCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccEEEECCCCCC
Confidence 00112334578899999999 4444432 233 37999999999999999999976555443333
No 17
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.83 E-value=5.8e-20 Score=171.32 Aligned_cols=166 Identities=14% Similarity=0.072 Sum_probs=123.0
Q ss_pred CCeEEEEEeCCCCcChHHHHHHHHHHhC---CceEEEccCC--C--CCCHHHHHHHHH----hhccCCEEEEEcCCCC-C
Q psy3650 6 YPYEIIVIDDGSPDGTLDAAKQLQSIYG---SEKIVLKPRK--K--KLGLGTAYMHGL----KYATGNFIIIMDADLS-H 73 (435)
Q Consensus 6 ~~~EiivvDd~S~d~t~~i~~~~~~~~~---~~~i~~~~~~--~--n~g~~~a~n~gl----~~a~gd~i~~lD~D~~-~ 73 (435)
.++|||||||||+|+|.+++++++++++ ..+++..... + |.|+|+|+++|+ +.|+||+|+++|+|.+ +
T Consensus 27 ~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~ 106 (397)
T 2bo4_A 27 PRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSF 106 (397)
T ss_dssp TTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSC
T ss_pred CCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCC
Confidence 3589999999999999999997776554 3445443222 3 899999999999 8899999999999996 8
Q ss_pred CCCcHHHHHHHHhcCCCcEEEEeeeecCCCccCcccchhhhhchHHHHHHHHhC----CCccccccceehhhHHHHHHhh
Q psy3650 74 HPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLR----PGVSDLTGSFRLYKKQVLENLV 149 (435)
Q Consensus 74 ~~~~l~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 149 (435)
+|+++..+++.+. +++|+|+|.+.....+. .........+.....+ ..+.++.+|+++|+|++++.+.
T Consensus 107 ~P~~i~~Ll~~l~-~g~D~V~g~~~r~~~~~-------~~~~~~~~~ll~~~~~~~~~~~i~dp~sG~~a~~R~vl~~l~ 178 (397)
T 2bo4_A 107 GPDWITKAEEAAD-FGYGLVRHYFPRASTDA-------MITWMITRTGFALLWPHTELSWIEQPLGGELLMRREVAAMLY 178 (397)
T ss_dssp CHHHHHHHHHHHH-TTCSEEEEECCCCTTSC-------HHHHHTHHHHHHHHCTTSSGGGCSCTTCCCEEEEHHHHHHHH
T ss_pred CHHHHHHHHHHHH-cCCCEEEEEeccccCCc-------HHHHHHHHHHHHHHHHHhhccccccCCcccEEEeHHHHHHHh
Confidence 9999999999985 46999999743221111 1111111111111221 1456677899999999999884
Q ss_pred cc---ccccCchhhHHHHHHHHhhcceeEeeee
Q psy3650 150 SS---CVSKGYVFQMEMVIRARQYNYTIGEVPI 179 (435)
Q Consensus 150 ~~---~~~~~~~~d~~l~~r~~~~g~~~~~~~~ 179 (435)
.. ....+|++|.++..++.+.|+++.++|+
T Consensus 179 ~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpi 211 (397)
T 2bo4_A 179 EDERVRRRSDWGIDTLYTFVTVQQGVSIYECYI 211 (397)
T ss_dssp HCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEEC
T ss_pred hhcccCcCCCcchHHHHHHHHHHcCCEEEEEEC
Confidence 22 1567889999999999999999999885
No 18
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.81 E-value=5.6e-20 Score=164.11 Aligned_cols=169 Identities=11% Similarity=0.109 Sum_probs=120.9
Q ss_pred CCCCCCeEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCC--------CCCCHHHHHHHHHhhccCCEEEEEcCCCCC
Q psy3650 2 DEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRK--------KKLGLGTAYMHGLKYATGNFIIIMDADLSH 73 (435)
Q Consensus 2 ~~~~~~~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~--------~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~ 73 (435)
.|+..++|||||||||+|+|.++++++++ +++ +.++..+ .|.|.+.++|.|++.|+||||+|+|+|+.+
T Consensus 25 ~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~--i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~ 101 (255)
T 1qg8_A 25 SQTFSDFELFIMDDNSNEETLNVIRPFLN-DNR--VRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIY 101 (255)
T ss_dssp TCSCCCEEEEEEECSCCHHHHHHHGGGGG-STT--EEEEECCCCSHHHHHSSCHHHHHHHHHHHHCCCSEEEEEETTEEE
T ss_pred hccCCceEEEEEECCCCchHHHHHHHHhh-cCC--EEEEecccccccccccccCHHHHHHHHHHHcCCCEEEEeCCCCcc
Confidence 35555699999999999999999999866 444 5555566 799999999999999999999999999999
Q ss_pred CCCcHHHHHHHHhcC-CCcEEEEeeeec--CCCccCcccchhhhhchHHHHHHHHhCCCccccccceehhhHHHHHHhh-
Q psy3650 74 HPKFIPEMIKLQQQE-NLDVVTGTRYVG--TGGVYGWDFKRKLVSRGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLV- 149 (435)
Q Consensus 74 ~~~~l~~~~~~~~~~-~~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 149 (435)
+|++|+.+++.++++ ++++|.+..... .... ........... ...........++..+++|++++++|
T Consensus 102 ~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~~~~rr~~~~~~g~ 173 (255)
T 1qg8_A 102 MPDRLLKMVRELDTHPEKAVIYSASKTYHLNENR--DIVKETVRPAA------QVTWNAPCAIDHCSVMHRYSVLEKVKE 173 (255)
T ss_dssp CTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC-----CEEEEEEECCC------SCBSCCTTTSCGGGEEEETHHHHHHHH
T ss_pred ChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCC--cchhhccCchH------HHHHhhcCCCccceEEEEHHHHHhhcc
Confidence 999999999999764 788888876433 2211 01111000000 00001122334566799999999987
Q ss_pred cc------ccccCchhhHHHHHHHHhhcceeEeeeeEee
Q psy3650 150 SS------CVSKGYVFQMEMVIRARQYNYTIGEVPISFV 182 (435)
Q Consensus 150 ~~------~~~~~~~~d~~l~~r~~~~g~~~~~~~~~~~ 182 (435)
++ .....+.+|++++.|+.+.| ++..+|....
T Consensus 174 ~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~ 211 (255)
T 1qg8_A 174 KFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELD 211 (255)
T ss_dssp HHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEE
T ss_pred cccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEE
Confidence 44 34445678999999998887 5666665433
No 19
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.80 E-value=7.8e-20 Score=169.00 Aligned_cols=174 Identities=18% Similarity=0.217 Sum_probs=120.4
Q ss_pred CeEEEEEeCCCCcChHHHHHHHHHHhCCceEEEc-cCCCCCCHHHHHHHHHhhccCCEEEEEcCCCC-CCCCcHHHHHHH
Q psy3650 7 PYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLK-PRKKKLGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPEMIKL 84 (435)
Q Consensus 7 ~~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~-~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~-~~~~~l~~~~~~ 84 (435)
++|||||||||+|+|.++++++..+.. .++.++ ..++|.|++.|+|.|++.|+||||+|+|+|+. ++|++|+.+++.
T Consensus 78 ~~eiivVDdgS~D~t~~~~~~~~~~~~-~~~~~~~~~~~n~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~ 156 (329)
T 3ckj_A 78 VDELIVLDSGSTDDTEIRAVAAGARVV-SREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGP 156 (329)
T ss_dssp BSEEEEEECSCCSSHHHHHHHTTCEEE-EHHHHCTTSCCCCSHHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHH
T ss_pred CcEEEEEeCCCCchHHHHHHHhhhhhc-cceeeeccCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHH
Confidence 489999999999999999998753210 011222 26789999999999999999999999999998 899999999999
Q ss_pred Hhc-CCCcEEEEeeeecCC--Ccc---CcccchhhhhchHHHHHHHHhC--CCccccccceehhhHHHHHHhhccccccC
Q psy3650 85 QQQ-ENLDVVTGTRYVGTG--GVY---GWDFKRKLVSRGANYLTQLLLR--PGVSDLTGSFRLYKKQVLENLVSSCVSKG 156 (435)
Q Consensus 85 ~~~-~~~~~v~g~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
+.+ +++++|+|....... +.. ...................... ....+..+++.+|+++++++++ +..+
T Consensus 157 l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~---f~~~ 233 (329)
T 3ckj_A 157 LLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLAALRPELGCILQPLGGEYAATRELLTSVP---FAPG 233 (329)
T ss_dssp HHSCSSCCEEEEEEECC---------------CHHHHHTHHHHHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC---BCCG
T ss_pred HHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHHHHHHhhhhhccccCCCccceeeeHHHHHhCC---CCCC
Confidence 644 678999998754321 100 0001111111111111111111 2345667788999999999996 3467
Q ss_pred chhhHHHHHHHHh-hcce-eEeeeeEeeec
Q psy3650 157 YVFQMEMVIRARQ-YNYT-IGEVPISFVDR 184 (435)
Q Consensus 157 ~~~d~~l~~r~~~-~g~~-~~~~~~~~~~r 184 (435)
|.+|+++++++.+ .|+. +.+++..++.+
T Consensus 234 ~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 234 YGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp GGHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred CcccHHHHHHHHHhcCCccEeeecceEEec
Confidence 8899999999976 6764 77777765544
No 20
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.79 E-value=1.4e-19 Score=176.07 Aligned_cols=179 Identities=14% Similarity=0.155 Sum_probs=127.1
Q ss_pred eEEEEEeCCCCcC-hHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHHHHh
Q psy3650 8 YEIIVIDDGSPDG-TLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQ 86 (435)
Q Consensus 8 ~EiivvDd~S~d~-t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~ 86 (435)
+|||||||||+|+ |.++++++.+++|. ++.+++.++|.|+++|+|.|++.|+||||+|+|+|+.++|++|+.+++.+.
T Consensus 62 ~EIIvVDd~S~d~~t~~~l~~~~~~~~~-~v~vi~~~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~ 140 (472)
T 1xhb_A 62 EEIVLVDDASERDFLKRPLESYVKKLKV-PVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIK 140 (472)
T ss_dssp EEEEEEECSCCCGGGTHHHHHHHHSSSS-CEEEEECSSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHH
T ss_pred eEEEEEECCCCcHHHHHHHHHHHHHCCC-cEEEEECCCCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHH
Confidence 6999999999995 99999999887762 466667888999999999999999999999999999999999999999998
Q ss_pred cCCCcEEEEeeeecCCCccCc-------------ccchhhhhchHHHHHHHHh----CCCccccccceehhhHHHHHHhh
Q psy3650 87 QENLDVVTGTRYVGTGGVYGW-------------DFKRKLVSRGANYLTQLLL----RPGVSDLTGSFRLYKKQVLENLV 149 (435)
Q Consensus 87 ~~~~~~v~g~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 149 (435)
+++..++++............ ................... ........+++.+++|++++++|
T Consensus 141 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iG 220 (472)
T 1xhb_A 141 HDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIG 220 (472)
T ss_dssp HCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTT
T ss_pred hCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcC
Confidence 777666655432222221110 0000000000000100000 11223445778899999999998
Q ss_pred ccccccC-c-hhhHHHHHHHHhhcceeEeeeeEeeecccc
Q psy3650 150 SSCVSKG-Y-VFQMEMVIRARQYNYTIGEVPISFVDRVVF 187 (435)
Q Consensus 150 ~~~~~~~-~-~~d~~l~~r~~~~g~~~~~~~~~~~~r~~~ 187 (435)
++..... | .+|.|+++|+.++|+++..+|.....+...
T Consensus 221 gfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~ 260 (472)
T 1xhb_A 221 TYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFR 260 (472)
T ss_dssp SCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC-
T ss_pred CCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEcc
Confidence 6654333 2 679999999999999999999877766643
No 21
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.79 E-value=4e-18 Score=155.90 Aligned_cols=220 Identities=18% Similarity=0.192 Sum_probs=146.8
Q ss_pred cceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcch------HHHHHHHHHHhCCceEEEecCCC----
Q psy3650 200 NKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGT------LDAAKQLQSIYGSEKIVLKPRKK---- 269 (435)
Q Consensus 200 ~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t------~~~~~~~~~~~~~~~i~~~~~~~---- 269 (435)
.++|||||+|||+..+ +..+ +.+....+|||+|||||+|+| .+.++++....+.... ++....
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~v---L~~i~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~-Vl~~~~p~v~ 123 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGV---LKAIPHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKII-MIHQKDPGLA 123 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHH---HHHSCTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEE-EEETTCHHHH
T ss_pred CCEEEEEecCcccHHH---HHHH---HHcCCCCcEEEEEECcCcccccchhhHHHHHHHHhhccccceE-EEecCCcchh
Confidence 4799999999999532 3333 333334689999999998877 7778887766554333 333322
Q ss_pred ------------------CCCHHHHHHHHHhhc---cCCEEEEEeCCCCCCCccHHHHHHHHh------cCCCceE-Eee
Q psy3650 270 ------------------KLGLGTAYMHGLKYA---TGNFIIIMDADLSHHPKFIPEMIKLQQ------QENLDVV-TGT 321 (435)
Q Consensus 270 ------------------n~g~~~a~n~g~~~a---~~d~v~~~d~D~~~~~~~l~~~~~~~~------~~~~~~v-~~~ 321 (435)
+.||+.|+-.|+..| ++|+|+++|+|. ..|..+.++++.+. +.++++| .+.
T Consensus 124 ~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~aG~~~a~~~~dmVR~~~ 202 (394)
T 2zu9_A 124 KAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAAGFLMSESEYTMVRLHW 202 (394)
T ss_dssp HHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHHHHHHCCSSSEEEEEEC
T ss_pred HHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhhcccccccccceeeecc
Confidence 249999999999999 899999999999 66777777766543 2457777 554
Q ss_pred eEECC---Cce--eccchhHHHHHHHHHHHHHHhcCCCc---cccccceeeecHHHHHHhhhcccCcccchhhHHHHHHH
Q psy3650 322 RYVGT---GGV--YGWDFKRKLVSRGANYLTQLLLRPGV---SDLTGSFRLYKKQVLENLVSSCVSKGYVFQMEMVIRAR 393 (435)
Q Consensus 322 ~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~~~~~D~el~lr~~ 393 (435)
+..+. +.. ..++....+.++..+.+.+...+... ..+.+|.++|+|++++.+ ....+|+.+.+++..+.
T Consensus 203 r~~~~~~~~rl~~~~~GRv~rl~~r~Ln~L~~~l~g~~~d~~~tplsGe~A~rr~ll~~L---~~~~gyGvE~~lLv~~~ 279 (394)
T 2zu9_A 203 RHKPKVTKGTLYFKKWGRVSEITNHYLNLLVSEHTAFETTIMVTGNAGEHAMTMKLAEIL---PFSTGYSIEPYEIVYIL 279 (394)
T ss_dssp C-----------------HHHHHHHHHHHHHHHHHSSCCCCCCCTTCSSEEEEHHHHTTC---CEESGGGHHHHHHHHHH
T ss_pred ccccccccccccccCCCceehhHHHHHHHHHHHhcCccccCcCCCCchhhHhhHHHHhcC---CCCCCCCCCHHHHHHHH
Confidence 43311 000 12344556777776777776666432 224558899999999988 33468999999999988
Q ss_pred HC----------------CCcEEEeeeEEeecccccccCCHHHHHHHHHHHHHHhh
Q psy3650 394 QY----------------NYTIGEVPISFVDRVYGESKLGGTEIFQFAKALLYLFA 433 (435)
Q Consensus 394 ~~----------------G~~i~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~~~f~ 433 (435)
++ |.+|..+... ..|.+. ......+.+...+++...+
T Consensus 280 r~~~~~~~~~~~~~~~~~g~~I~qve~~-~pH~H~--~~g~~~l~~M~~~~~~~i~ 332 (394)
T 2zu9_A 280 ERFGKWENVEEFKDVFDQGIEIFQIETL-NPHFHE--DKGKEHVKEMLLLSLATIY 332 (394)
T ss_dssp HHHSSCCSCGGGHHHHHHCEEEEEEECS-SCCCBC--CCCHHHHHHHHHHHHHHHH
T ss_pred HhhCccccccccccccccCceEEEEecc-CCcccc--ccchhHHHHHHHHHHHHHH
Confidence 87 7789888875 333332 2246666666666665443
No 22
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.77 E-value=2.6e-19 Score=177.41 Aligned_cols=177 Identities=14% Similarity=0.156 Sum_probs=125.6
Q ss_pred eEEEEEeCCCCcCh-HHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHHHHh
Q psy3650 8 YEIIVIDDGSPDGT-LDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQ 86 (435)
Q Consensus 8 ~EiivvDd~S~d~t-~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~ 86 (435)
+|||||||||+|+| .++++++.+++++ |.+++.++|.|++.|+|.|++.|+||||+|+|+|+.++|+||+.+++.+.
T Consensus 145 ~EIIVVDDgS~D~tl~~~l~~~~~~~~~--v~vi~~~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~ 222 (570)
T 2d7i_A 145 AEIVLVDDFSDREHLKKPLEDYMALFPS--VRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIA 222 (570)
T ss_dssp EEEEEEECSCCCGGGTHHHHHHHTTSTT--EEEEECSSCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHH
T ss_pred EEEEEEECCCCcHHHHHHHHHHHHhCCe--EEEEECCCCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHH
Confidence 59999999999999 8999999887764 66667788999999999999999999999999999999999999999997
Q ss_pred cCCCcEEEEeeeecC-CCccCccc----------chhhhhchHH-----HHHHHHhCCCccccccceehhhHHHHHHhhc
Q psy3650 87 QENLDVVTGTRYVGT-GGVYGWDF----------KRKLVSRGAN-----YLTQLLLRPGVSDLTGSFRLYKKQVLENLVS 150 (435)
Q Consensus 87 ~~~~~~v~g~~~~~~-~~~~~~~~----------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (435)
+++ ++++++..... ........ ...+...... ...............+++.+++|++++++|+
T Consensus 223 ~~~-~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGg 301 (570)
T 2d7i_A 223 RNR-KTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGG 301 (570)
T ss_dssp HCT-TEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTS
T ss_pred hCC-CEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCC
Confidence 765 44555443221 11110000 0000000000 0000000112233457889999999999976
Q ss_pred cccccC-c-hhhHHHHHHHHhhcceeEeeeeEeeecccc
Q psy3650 151 SCVSKG-Y-VFQMEMVIRARQYNYTIGEVPISFVDRVVF 187 (435)
Q Consensus 151 ~~~~~~-~-~~d~~l~~r~~~~g~~~~~~~~~~~~r~~~ 187 (435)
+..... | .+|.|+++|+.++|+++..+|.....+.+.
T Consensus 302 fDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r 340 (570)
T 2d7i_A 302 YDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYR 340 (570)
T ss_dssp SCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCC
T ss_pred CCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcc
Confidence 654333 2 689999999999999999999887777644
No 23
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.76 E-value=4.2e-18 Score=152.67 Aligned_cols=161 Identities=14% Similarity=0.118 Sum_probs=114.4
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHH
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYM 278 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n 278 (435)
.|+||||||+||+++.|.++|+++...+.+.+.++|||||||+++ ..++++.++|
T Consensus 64 ~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d-------------------------~~f~~a~a~N 118 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGD-------------------------TIFNRAKLLN 118 (287)
T ss_dssp SCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSS-------------------------SCCCHHHHHH
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEeCCC-------------------------Cccchhhhhh
Confidence 689999999999999999999999866667778999999999432 1236788999
Q ss_pred HHH----hhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHHHHHHHHHHHHhcCCC
Q psy3650 279 HGL----KYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLRPG 354 (435)
Q Consensus 279 ~g~----~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (435)
.|+ +.|+|||++|+|+|+.+.+++.. ... +. .++.. . .....+ ....+
T Consensus 119 ~G~~~al~~A~gd~i~flD~D~i~~~d~~~-----~~~-~~----~p~~~-~------~~~~~~-----------~~~~~ 170 (287)
T 2fy7_A 119 VGFQEALKDYDYTCFVFSDVDLIPMNDHNA-----YRC-FS----QPRHI-S------VAMDKF-----------GFSLP 170 (287)
T ss_dssp HHHHHHHHHSCCCEEEEECTTEEESBTTSC-----CSC-CS----SCEEC-C------CEEGGG-----------TTSCS
T ss_pred hHHHHHHHhCCCCEEEEECCCcccCCCcce-----Eec-CC----CCceE-E------Eeeccc-----------ccCCC
Confidence 999 88999999999999998888521 000 00 00000 0 000000 11123
Q ss_pred ccccccceeeecHHHHHHhhhcccC-cccc-hhhHHHHHHHHCCCcEE-----EeeeEEeecccc
Q psy3650 355 VSDLTGSFRLYKKQVLENLVSSCVS-KGYV-FQMEMVIRARQYNYTIG-----EVPISFVDRVYG 412 (435)
Q Consensus 355 ~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~-~D~el~lr~~~~G~~i~-----~~p~~~~~~~~~ 412 (435)
+....|++++++|++|++++++.+. .+|+ ||.||++|+.++|+++. +.+.....|.++
T Consensus 171 ~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~ 235 (287)
T 2fy7_A 171 YVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRD 235 (287)
T ss_dssp STTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC----
T ss_pred cCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCC
Confidence 3456788999999999999877654 3443 99999999999999999 555665555443
No 24
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.75 E-value=2.1e-18 Score=168.90 Aligned_cols=173 Identities=17% Similarity=0.168 Sum_probs=120.0
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHHHHhc
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQ 87 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~ 87 (435)
+|||||||||+|+|.+.+ .++++ +|.+++.++|.|++.|+|.|++.|+||||+|+|+|+.++|++|+.+++.+.+
T Consensus 99 ~EIIvVDDgS~D~t~~~~---~~~~~--~v~vi~~~~n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 99 KEIILVDDYSNDPEDGAL---LGKIE--KVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAE 173 (501)
T ss_dssp EEEEEEECSCSCTHHHHG---GGGBT--TEEEEECSSCCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHH
T ss_pred eeEEEEECCCCchHHHHH---HhcCC--CEEEEECCCCcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 699999999999996432 34455 4666678899999999999999999999999999999999999999999987
Q ss_pred CCCcEEEEeeeecCCCccCc---------ccchhh----hhchHHHHHHHH----hCCCccccccceehhhHHHHHHhhc
Q psy3650 88 ENLDVVTGTRYVGTGGVYGW---------DFKRKL----VSRGANYLTQLL----LRPGVSDLTGSFRLYKKQVLENLVS 150 (435)
Q Consensus 88 ~~~~~v~g~~~~~~~~~~~~---------~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (435)
++.++|++............ .+.... ............ .........|++.+++|++++++|+
T Consensus 174 ~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGg 253 (501)
T 2ffu_A 174 DRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGK 253 (501)
T ss_dssp CTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTC
T ss_pred CCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCC
Confidence 77766655432222111100 000000 000000000000 0112234557889999999999976
Q ss_pred ccccc-Cc-hhhHHHHHHHHhhcceeEeeeeEeeecc
Q psy3650 151 SCVSK-GY-VFQMEMVIRARQYNYTIGEVPISFVDRV 185 (435)
Q Consensus 151 ~~~~~-~~-~~d~~l~~r~~~~g~~~~~~~~~~~~r~ 185 (435)
+.... .+ .+|.|+++|+.++|+++..+|.....+.
T Consensus 254 fde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~ 290 (501)
T 2ffu_A 254 YDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHV 290 (501)
T ss_dssp CCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEEC
T ss_pred CCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEE
Confidence 65443 33 7899999999999999999996655554
No 25
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.71 E-value=5.8e-19 Score=180.49 Aligned_cols=171 Identities=12% Similarity=0.074 Sum_probs=0.0
Q ss_pred CCCCCCeEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHH
Q psy3650 2 DEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEM 81 (435)
Q Consensus 2 ~~~~~~~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~ 81 (435)
.|+..++|||||||||+|+|.+++++++++++ .+|.++..++|.|.++|+|.|++.|+||||+|+|+|+.++|++|+.+
T Consensus 26 ~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~i~~~~n~G~~~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l 104 (729)
T 3l7i_A 26 QQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRFIDLDENSGHAHARNIALEEVETPYFMFLDADDELASYAITFY 104 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hCCCCCeEEEEEECCCCCcHHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHHHHhccCCEEEEECCCCCCChhHHHHH
Confidence 45555699999999999999999999987743 25777777889999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEEeeeecCCCccCcccchhhhhchHHHHHHHHhCCCccccccceehhhHHHHHHhh-ccccccCchhh
Q psy3650 82 IKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLV-SSCVSKGYVFQ 160 (435)
Q Consensus 82 ~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d 160 (435)
++.+. +.+++++.......................... ...........++..++++++++++| ++.....+.+|
T Consensus 105 ~~~l~--~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED 180 (729)
T 3l7i_A 105 LEKFN--NTDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAK--ENINSFLRKQSACNIIFRTAIVRAHHIRFNENLNTYVD 180 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhc--CCCEEEEeeEEeecCCCccccccceeeeeecch--hhHHHHhhccchhheeeeHHHHHHcCCCcCCCCCcccC
Confidence 99996 667776654322221110000000000000000 00001111223445799999999987 45544457889
Q ss_pred HHHHHHHHhhcceeEee
Q psy3650 161 MEMVIRARQYNYTIGEV 177 (435)
Q Consensus 161 ~~l~~r~~~~g~~~~~~ 177 (435)
+++++|+...|.++..+
T Consensus 181 ~d~~~rl~~~g~~i~~~ 197 (729)
T 3l7i_A 181 WSFVLEYMKYVNKFVRI 197 (729)
T ss_dssp -----------------
T ss_pred HHHHHHHHHhcCCEEEe
Confidence 99999999999988777
No 26
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.70 E-value=6.4e-17 Score=161.48 Aligned_cols=177 Identities=15% Similarity=0.107 Sum_probs=119.2
Q ss_pred CCeEEEEEeCCCCcC--hHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhcc----CCEEEEEcCCCCCCCCcHH
Q psy3650 6 YPYEIIVIDDGSPDG--TLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYAT----GNFIIIMDADLSHHPKFIP 79 (435)
Q Consensus 6 ~~~EiivvDd~S~d~--t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~----gd~i~~lD~D~~~~~~~l~ 79 (435)
.++|||||||||+|+ +..+.+......+ +|.++..+ |.|.++++|.|++.|. +|||+|||+|+.++|++|+
T Consensus 211 ~~~EIIVVDNgStD~s~~~~~~e~~~~~~~--~I~vI~~~-N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~ 287 (657)
T 4fix_A 211 VIGAVIVPDQGERKVRDHPDFPAAAARLGS--RLSIHDQP-NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSIL 287 (657)
T ss_dssp TEEEEEEEECSSSCGGGSTTHHHHHHHHGG--GEEEEECC-CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHH
T ss_pred CCCEEEEEECcCCCccchHHHHHHHHhcCC--CEEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHH
Confidence 357999999999984 3333333333334 56666666 9999999999999995 4899999999999999999
Q ss_pred HHHHHHhcCCCcEEEEeeeecCCCcc------------Ccccchh--------h----hhchHHHHHHHHhCCCcccccc
Q psy3650 80 EMIKLQQQENLDVVTGTRYVGTGGVY------------GWDFKRK--------L----VSRGANYLTQLLLRPGVSDLTG 135 (435)
Q Consensus 80 ~~~~~~~~~~~~~v~g~~~~~~~~~~------------~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~~~~ 135 (435)
.+++.++..+...++|+......... ...+... + .....................+
T Consensus 288 ~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g 367 (657)
T 4fix_A 288 RVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGW 367 (657)
T ss_dssp HHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCT
T ss_pred HHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccccccccccccccceeccccch
Confidence 99999977655555665433322210 0000000 0 0000000111111222334456
Q ss_pred ceehhhHHHHHHhhccccccCchhhHHHHHHHHhhcceeEeeeeEeeecc
Q psy3650 136 SFRLYKKQVLENLVSSCVSKGYVFQMEMVIRARQYNYTIGEVPISFVDRV 185 (435)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~r~~~~g~~~~~~~~~~~~r~ 185 (435)
.+.++++++++++|++.....+.+|.|+++|+.++|+++..+|-....+.
T Consensus 368 ~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 368 WTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLPGAAIWHM 417 (657)
T ss_dssp TEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEEEEEEEEC
T ss_pred hHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEECCEEEEEc
Confidence 67899999999998766555667899999999999999999888777664
No 27
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.68 E-value=6.9e-16 Score=136.53 Aligned_cols=173 Identities=14% Similarity=0.103 Sum_probs=118.3
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcch---HHHHHHHHHH-hCCceEEEecCCCCCC--
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGT---LDAAKQLQSI-YGSEKIVLKPRKKKLG-- 272 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t---~~~~~~~~~~-~~~~~i~~~~~~~n~g-- 272 (435)
.+++|||||+||++. ++++++ +.|.+.++|||+|||||+|.+ .++++++.+. .. ++.+++ ++|.|
T Consensus 52 ~~klSIVVPvYNEe~---~lLesV---l~qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~--ri~viH-Qkn~gls 122 (391)
T 2wvl_A 52 LEQTAIVVPTRNERL---KLLEGV---LSGIPHEALILVASNSSPDRFQMERDLLEEFAHLTER--PALIFH-QKDPALA 122 (391)
T ss_dssp HTTEEEEEEESSCCH---HHHHHH---HHTSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTC--CEEEEE-TTCHHHH
T ss_pred HhceEEEEeccCcHH---HHHHHH---HhcCCCCceEEEEECCCCCChHhHHHHHHHHHhhccc--ceEEEe-ccChHHH
Confidence 468999999999996 455555 457778999999999999999 5688888764 33 455553 33444
Q ss_pred ---------------------HHHHHHHHHhhc---cCCEEEEEeCCCCCCCccHHHHHHH--H---hcCCCceE-Eeee
Q psy3650 273 ---------------------LGTAYMHGLKYA---TGNFIIIMDADLSHHPKFIPEMIKL--Q---QQENLDVV-TGTR 322 (435)
Q Consensus 273 ---------------------~~~a~n~g~~~a---~~d~v~~~d~D~~~~~~~l~~~~~~--~---~~~~~~~v-~~~~ 322 (435)
||.|+..|+..| .++||.|+|+|+.++.+..+-+... . ...++++| ++.|
T Consensus 123 ~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s~~~MVRI~wR 202 (391)
T 2wvl_A 123 EALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKTPFAMVRILWR 202 (391)
T ss_dssp HHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCSSEEEEEEECC
T ss_pred HHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCCCcceEEEecc
Confidence 455555688887 6999999999999966544444332 2 23678888 8888
Q ss_pred EECCC------ceeccchhHHHHHHHHHHHHHHhcCCCcccc---ccceeeecHHHHHHhhhcccCcccc
Q psy3650 323 YVGTG------GVYGWDFKRKLVSRGANYLTQLLLRPGVSDL---TGSFRLYKKQVLENLVSSCVSKGYV 383 (435)
Q Consensus 323 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~~~~~~ 383 (435)
..+.- ....|+..++..+++++.+.+..++...... ..|==+++-++.+.+ .+..+|.
T Consensus 203 ~kPK~~~~~~l~f~k~Grvs~itNr~lN~Lis~~~g~et~ii~TgNAGEHAmt~~LA~~l---~~~tGya 269 (391)
T 2wvl_A 203 YKPKLTEDEGVVFRRYGRVSERNNRALNQLIGGVSGFETDVVKTANAGEHAMSLGLALRL---PLASGYA 269 (391)
T ss_dssp CCC------CCHHHHTHHHHHHHHHHHHHHHHHHHSSCCCCCCCSSCSSEEEEHHHHTTS---CEESSTT
T ss_pred cCcccccCCceeEeecCccchhhHHHHHHHHHHhhCcccceEeccCchhhhhhHHHHHhc---Ccccccc
Confidence 76541 2345778889999999999998877653221 112235666655554 3445554
No 28
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.62 E-value=1.4e-15 Score=156.03 Aligned_cols=175 Identities=14% Similarity=0.138 Sum_probs=117.1
Q ss_pred CCCCC---eEEEEEeCCCCcChH---------------HHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEE
Q psy3650 3 EGNYP---YEIIVIDDGSPDGTL---------------DAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFI 64 (435)
Q Consensus 3 ~~~~~---~EiivvDd~S~d~t~---------------~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i 64 (435)
+++|| +|||||||||+|+|. +.+++++++.+ .++.. ..+.+.|+++++|.|++.|+||||
T Consensus 165 ~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~-v~~i~-~~~~~~GKa~alN~gl~~a~gd~I 242 (802)
T 4hg6_A 165 NMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELG-VVYST-RERNEHAKAGNMSAALERLKGELV 242 (802)
T ss_dssp TSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHT-CEEEE-CSSCCSHHHHHHHHHHHHCCCSEE
T ss_pred hccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcC-cEEEE-ecCCCCcchHHHHHHHHhcCCCEE
Confidence 34555 899999999999993 34555555443 23322 234447999999999999999999
Q ss_pred EEEcCCCCCCCCcHHHHHHHHh-cCCCcEEEEeeeecCCCccCc--ccchhhh---hchHHHHHHHHhCCCcccccccee
Q psy3650 65 IIMDADLSHHPKFIPEMIKLQQ-QENLDVVTGTRYVGTGGVYGW--DFKRKLV---SRGANYLTQLLLRPGVSDLTGSFR 138 (435)
Q Consensus 65 ~~lD~D~~~~~~~l~~~~~~~~-~~~~~~v~g~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 138 (435)
+++|+|+.++|++++.+++.++ +++.++|.|............ ....... ....................|++.
T Consensus 243 l~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 322 (802)
T 4hg6_A 243 VVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAA 322 (802)
T ss_dssp EECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSE
T ss_pred EEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccch
Confidence 9999999999999999999995 467788888654443321000 0000000 001111111111112223456678
Q ss_pred hhhHHHHHHhhccccccCchhhHHHHHHHHhhcceeEeeeeE
Q psy3650 139 LYKKQVLENLVSSCVSKGYVFQMEMVIRARQYNYTIGEVPIS 180 (435)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~d~~l~~r~~~~g~~~~~~~~~ 180 (435)
++|+++++++|+... ..+.+|.+++.|+.+.|+++..+|..
T Consensus 323 ~~Rr~al~~vGgf~~-~~~~ED~~l~~rl~~~G~ri~~~~~~ 363 (802)
T 4hg6_A 323 VLRRRALDEAGGFAG-ETITEDAETALEIHSRGWKSLYIDRA 363 (802)
T ss_dssp EEEHHHHHHHTTCCC-SSSSHHHHHHHHHHTTTCCEEECCCC
T ss_pred hhhHHHHHHcCCcCC-CCcchHHHHHHHHHHcCCeEEEecCC
Confidence 999999999976553 34578999999999999998777644
No 29
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.48 E-value=2.6e-13 Score=124.20 Aligned_cols=164 Identities=16% Similarity=0.174 Sum_probs=109.1
Q ss_pred CCCeEEEEEeCCCCcCh------HHHHHHHHHHhCCceEEEccCC---------------------CCCCHHHHHHHHHh
Q psy3650 5 NYPYEIIVIDDGSPDGT------LDAAKQLQSIYGSEKIVLKPRK---------------------KKLGLGTAYMHGLK 57 (435)
Q Consensus 5 ~~~~EiivvDd~S~d~t------~~i~~~~~~~~~~~~i~~~~~~---------------------~n~g~~~a~n~gl~ 57 (435)
.+.+|||||||||+|+| .++++++++..+...+++.... .+.|++.|+.+|+.
T Consensus 75 ~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~Vl~~~~p~v~~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~ 154 (394)
T 2zu9_A 75 PHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKIIMIHQKDPGLAKAFKEVGYTDILDENGMIRSGKGEGMLVGLL 154 (394)
T ss_dssp CTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEEEEETTCHHHHHHHHHHTCCTTBCTTSSBCCSHHHHHHHHHH
T ss_pred CCCcEEEEEECcCcccccchhhHHHHHHHHhhccccceEEEecCCcchhHHhhhccccccccccccccCChHHHHHHHHH
Confidence 45689999999998888 7888888876555444443222 12499999999999
Q ss_pred hc---cCCEEEEEcCCCCCCCCcHHHHHHHHh------cCCCcEE-EEeeeecCCCc-----cCcccchhhhhchHHHHH
Q psy3650 58 YA---TGNFIIIMDADLSHHPKFIPEMIKLQQ------QENLDVV-TGTRYVGTGGV-----YGWDFKRKLVSRGANYLT 122 (435)
Q Consensus 58 ~a---~gd~i~~lD~D~~~~~~~l~~~~~~~~------~~~~~~v-~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 122 (435)
.| +||+|+++|+|. ..|..+..+++.+. +.++++| .+.+....-.. ..+.....+.++..+.+.
T Consensus 155 ~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~aG~~~a~~~~dmVR~~~r~~~~~~~~rl~~~~~GRv~rl~~r~Ln~L~ 233 (394)
T 2zu9_A 155 LAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAAGFLMSESEYTMVRLHWRHKPKVTKGTLYFKKWGRVSEITNHYLNLLV 233 (394)
T ss_dssp HHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHHHHHHCCSSSEEEEEECC-----------------HHHHHHHHHHHHH
T ss_pred HHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhhcccccccccceeeeccccccccccccccccCCCceehhHHHHHHHHH
Confidence 99 899999999999 66777777776653 2467887 55543211000 111222344444444455
Q ss_pred HHHhCCCc--c-ccccceehhhHHHHHHhhccccccCchhhHHHHHHHHhhcc
Q psy3650 123 QLLLRPGV--S-DLTGSFRLYKKQVLENLVSSCVSKGYVFQMEMVIRARQYNY 172 (435)
Q Consensus 123 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~r~~~~g~ 172 (435)
..+.+... . ...+|+++++++++..+. +..+|+.+.++...+.+.+.
T Consensus 234 ~~l~g~~~d~~~tplsGe~A~rr~ll~~L~---~~~gyGvE~~lLv~~~r~~~ 283 (394)
T 2zu9_A 234 SEHTAFETTIMVTGNAGEHAMTMKLAEILP---FSTGYSIEPYEIVYILERFG 283 (394)
T ss_dssp HHHHSSCCCCCCCTTCSSEEEEHHHHTTCC---EESGGGHHHHHHHHHHHHHS
T ss_pred HHhcCccccCcCCCCchhhHhhHHHHhcCC---CCCCCCCCHHHHHHHHHhhC
Confidence 55545432 1 134589999999999873 34699999999999887744
No 30
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.43 E-value=2.7e-13 Score=119.86 Aligned_cols=138 Identities=12% Similarity=0.079 Sum_probs=87.1
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHHHHhc
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQ 87 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~ 87 (435)
+|||||||+|+|. .|.+.|+|.|++.|+|||++|+|+|+.++|+||+.+++.+++
T Consensus 47 ~EiIVVDn~s~d~-------------------------~g~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 47 AEFLAADNREGNQ-------------------------FHGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp EEEEEEECTTSCS-------------------------CCTTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEECCCCCc-------------------------ccHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 8999999988762 367899999999999999999999999999999999999976
Q ss_pred -----CCCcEEEEeeeecCC--CccC-c-ccchhhhh---chHHHHHHHHhCCCccccccceehhhHHHHHHhhccc-cc
Q psy3650 88 -----ENLDVVTGTRYVGTG--GVYG-W-DFKRKLVS---RGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLVSSC-VS 154 (435)
Q Consensus 88 -----~~~~~v~g~~~~~~~--~~~~-~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 154 (435)
++.. ++|....... +... . ........ .... ..........+++.++++++ .+++. ..
T Consensus 102 ~~~~~~~vg-~vg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~g~~~~~rr~~---~~gFDe~~ 172 (249)
T 2nxv_A 102 LEEADPKWL-VAGVAGSPWRPLNHSVTAQALHISDVFGNDRRRG-----NVPCRVESLDECFLLMRRLK---PVLNSYDM 172 (249)
T ss_dssp HHHHCTTEE-EEESEEEESSCSCTTSCCCEEEEEETTEEEEEES-----CSSEEEEEECTTEEEEETTB---CCCCCSSC
T ss_pred cccCCCCee-EEeecccccCCCCceeeecccccCCccccccccC-----CCceEcCeeeeEeeEEEHhh---hCCCCCCC
Confidence 3333 3443322111 1000 0 00000000 0000 00111222345677889988 33333 22
Q ss_pred cCc-hhhHHHHHHHHhhcceeEeeee
Q psy3650 155 KGY-VFQMEMVIRARQYNYTIGEVPI 179 (435)
Q Consensus 155 ~~~-~~d~~l~~r~~~~g~~~~~~~~ 179 (435)
.+| .+|.|+++|+++.|+++...|.
T Consensus 173 ~~~~~~D~Dl~~R~~~~G~~~~~~p~ 198 (249)
T 2nxv_A 173 QGFHYYGADLCLQAEFLGGRAYAIDF 198 (249)
T ss_dssp CSSSSHHHHHHHHHHHTTCEEEECCC
T ss_pred CCcceehhHHHHHHHHcCCeEEEecc
Confidence 233 3699999999999999877664
No 31
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.36 E-value=1.1e-12 Score=116.34 Aligned_cols=165 Identities=16% Similarity=0.087 Sum_probs=109.5
Q ss_pred CCCCCCeEEEEEeCCCCcCh---HHHHHHHHHH-hCCceEEEccCCCCCCHHHHHH-----------------------H
Q psy3650 2 DEGNYPYEIIVIDDGSPDGT---LDAAKQLQSI-YGSEKIVLKPRKKKLGLGTAYM-----------------------H 54 (435)
Q Consensus 2 ~~~~~~~EiivvDd~S~d~t---~~i~~~~~~~-~~~~~i~~~~~~~n~g~~~a~n-----------------------~ 54 (435)
+|...++|||||||||+|+| .+++++|++. +.+ +.++ ++.|.|.+.|+| .
T Consensus 74 ~qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~r--i~vi-HQkn~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~ 150 (391)
T 2wvl_A 74 SGIPHEALILVASNSSPDRFQMERDLLEEFAHLTERP--ALIF-HQKDPALAEALRAGGYPHPIGEDGLVRSGKAEGMIL 150 (391)
T ss_dssp HTSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTCC--EEEE-ETTCHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHH
T ss_pred hcCCCCceEEEEECCCCCChHhHHHHHHHHHhhcccc--eEEE-eccChHHHHHHHhcCcchhhcccccccccchHHHHH
Confidence 45566799999999999999 5788899874 444 4444 466666666665 4
Q ss_pred HHhhc---cCCEEEEEcCCCCCCCCcHHHHH---HHH--hcCCCcEE-EEeeeecCC------CccCcccchhhhhchHH
Q psy3650 55 GLKYA---TGNFIIIMDADLSHHPKFIPEMI---KLQ--QQENLDVV-TGTRYVGTG------GVYGWDFKRKLVSRGAN 119 (435)
Q Consensus 55 gl~~a---~gd~i~~lD~D~~~~~~~l~~~~---~~~--~~~~~~~v-~g~~~~~~~------~~~~~~~~~~~~~~~~~ 119 (435)
|+..| .|+||.|+|+|+.++....+.+. ..+ .+.++++| +++++...- ....|...+++.++.++
T Consensus 151 Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s~~~MVRI~wR~kPK~~~~~~l~f~k~Grvs~itNr~lN 230 (391)
T 2wvl_A 151 ALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKTPFAMVRILWRYKPKLTEDEGVVFRRYGRVSERNNRALN 230 (391)
T ss_dssp HHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCSSEEEEEEECCCCC------CCHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCCCcceEEEecccCcccccCCceeEeecCccchhhHHHHH
Confidence 77887 69999999999999665444333 222 23678899 999875532 12345566677777777
Q ss_pred HHHHHHhCCC--c-cccccceehhhHHHHHHhhccccccCchhh-HHHHHHHHhhcc
Q psy3650 120 YLTQLLLRPG--V-SDLTGSFRLYKKQVLENLVSSCVSKGYVFQ-MEMVIRARQYNY 172 (435)
Q Consensus 120 ~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~l~~r~~~~g~ 172 (435)
.+.+...+.. + .....|=-+++-++...+ .+..+|..+ +++....-+.|.
T Consensus 231 ~Lis~~~g~et~ii~TgNAGEHAmt~~LA~~l---~~~tGyaiEp~~~v~lle~fg~ 284 (391)
T 2wvl_A 231 QLIGGVSGFETDVVKTANAGEHAMSLGLALRL---PLASGYAVEPQELVSLLELYGG 284 (391)
T ss_dssp HHHHHHHSSCCCCCCCSSCSSEEEEHHHHTTS---CEESSTTHHHHHHHHHHHHHSS
T ss_pred HHHHHhhCcccceEeccCchhhhhhHHHHHhc---CcccccccCchHHHHHHHHhcc
Confidence 7776665554 2 222334457888888777 445666554 666655555444
No 32
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.03 E-value=3.3e-10 Score=101.36 Aligned_cols=104 Identities=12% Similarity=-0.044 Sum_probs=68.8
Q ss_pred CHHHHHHHHH----hhccCCEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEEEEeeeecCCCccCcccchhhhhchHHHHH
Q psy3650 47 GLGTAYMHGL----KYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLT 122 (435)
Q Consensus 47 g~~~a~n~gl----~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (435)
+++.++|.|+ +.|+||||+|+|+|+++.|+++. ..+ +.. ..... ......
T Consensus 112 ~~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~--------~~~----~~~----p~~~~-~~~~~~--------- 165 (287)
T 2fy7_A 112 NRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNA--------YRC----FSQ----PRHIS-VAMDKF--------- 165 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSC--------CSC----CSS----CEECC-CEEGGG---------
T ss_pred chhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcce--------Eec----CCC----CceEE-Eeeccc---------
Confidence 6788999999 89999999999999999998621 000 000 00000 000000
Q ss_pred HHHhCCCccccccceehhhHHHHHHhhcccc-ccCch-hhHHHHHHHHhhcceeEeee
Q psy3650 123 QLLLRPGVSDLTGSFRLYKKQVLENLVSSCV-SKGYV-FQMEMVIRARQYNYTIGEVP 178 (435)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~d~~l~~r~~~~g~~~~~~~ 178 (435)
..........|++.+++|++++++|++.. ..+|+ +|.|++.|+.+.|+++...+
T Consensus 166 --~~~~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~ 221 (287)
T 2fy7_A 166 --GFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPN 221 (287)
T ss_dssp --TTSCSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCC
T ss_pred --ccCCCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecC
Confidence 01112234457789999999999976654 34453 89999999999999887443
No 33
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.78 E-value=1.9e-08 Score=91.65 Aligned_cols=108 Identities=12% Similarity=0.081 Sum_probs=79.0
Q ss_pred cceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHH-----hCCceEEEecCCCCCCHH
Q psy3650 200 NKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSI-----YGSEKIVLKPRKKKLGLG 274 (435)
Q Consensus 200 ~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-----~~~~~i~~~~~~~n~g~~ 274 (435)
+.++|+|++||+.+ ++++|++|.++- ......+|||.|||+.+++.++++++... ++.+..+ ...++|.|..
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~-p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~-~~~~~N~g~~ 78 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYR-PSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNI-AVQPDHRKFQ 78 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHC-SCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCC-CCCTTCGGGH
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcC-CCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCcccc-ccchhhcCcc
Confidence 35789999999998 999999998742 12345799999999999999988876421 0111110 1135566643
Q ss_pred ----------HHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHH
Q psy3650 275 ----------TAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQ 310 (435)
Q Consensus 275 ----------~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~ 310 (435)
.+++.++..+++++++++|+|..++|+++.-+...+
T Consensus 79 ~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l 124 (343)
T 1fo8_A 79 GYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATY 124 (343)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHH
T ss_pred cchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHH
Confidence 567777777789999999999999999996666554
No 34
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=98.44 E-value=1.6e-06 Score=74.76 Aligned_cols=151 Identities=15% Similarity=0.226 Sum_probs=108.0
Q ss_pred CCcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHH
Q psy3650 198 VKNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAY 277 (435)
Q Consensus 198 ~~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~ 277 (435)
...+++||||.+|+++.|..+|..+...|......+.|+||+-. ....+..|..+
T Consensus 49 ~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~VieQ~-------------------------~~~~FNRa~Ll 103 (287)
T 3lw6_A 49 SVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQV-------------------------DRFRFNRASLI 103 (287)
T ss_dssp CCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEC-------------------------SSSCCCHHHHH
T ss_pred CcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEEecC-------------------------CCCccchhhee
Confidence 35789999999999999999999999888877778899888632 12356789999
Q ss_pred HHHHhhcc--CCEEEEEeCCCCCCCccHHHHHHHHhcCCCceE--EeeeEECCCceeccchhHHHHHHHHHHHHHHhcCC
Q psy3650 278 MHGLKYAT--GNFIIIMDADLSHHPKFIPEMIKLQQQENLDVV--TGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLRP 353 (435)
Q Consensus 278 n~g~~~a~--~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (435)
|.|+..|. .|+++|=|.|.....+.. .+..- ..++..... ......
T Consensus 104 NvGf~ea~~~~d~~ifHDVDLlP~dd~n----------~Y~c~~~~~P~Hls~~--------------------~~~~~~ 153 (287)
T 3lw6_A 104 NVGFQFASDVYDYIAMHDVDLLPLNDNL----------LYEYPSSLGPLHIAGP--------------------KLHPKY 153 (287)
T ss_dssp HHHHHHSCTTCCEEEEECTTEEECCTTS----------CCCCCCTTCCEESSCT--------------------TTCSSC
T ss_pred cccHHHHhccCCEEEEecccccccCCCc----------cccCCCCCCceEEeec--------------------cccCCC
Confidence 99999985 499999999876542211 01000 011211100 011122
Q ss_pred CccccccceeeecHHHHHHhhhcccC-cccc-hhhHHHHHHHHCCCcEEEee
Q psy3650 354 GVSDLTGSFRLYKKQVLENLVSSCVS-KGYV-FQMEMVIRARQYNYTIGEVP 403 (435)
Q Consensus 354 ~~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~-~D~el~lr~~~~G~~i~~~p 403 (435)
++....||.++++++.+.+++|+.+. .+++ ||.|+..|+..+|+++...+
T Consensus 154 ~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~ 205 (287)
T 3lw6_A 154 HYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQ 205 (287)
T ss_dssp CCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCS
T ss_pred CcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCC
Confidence 34456788899999999999876544 4554 99999999999999998876
No 35
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=98.41 E-value=5.5e-08 Score=78.60 Aligned_cols=115 Identities=16% Similarity=0.202 Sum_probs=78.9
Q ss_pred HHHHHHHHHhh----ccCCEEEEEeCC---CCCCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHHHHHHHH
Q psy3650 273 LGTAYMHGLKY----ATGNFIIIMDAD---LSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANY 345 (435)
Q Consensus 273 ~~~a~n~g~~~----a~~d~v~~~d~D---~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (435)
...|+|..+.. ...|+++++|+| ..++|+.+.+++ +.+.|+|+|++...... +..... +.
T Consensus 37 I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV~GsYp~K~~~--~~s~~a-------~~ 103 (203)
T 2c0n_A 37 VAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVVCGYYYLKTLR--GYSVYR-------KD 103 (203)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEEEEECBCTTSS--SBSEES-------SS
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEEEEEeeccCCC--ccchHH-------HH
Confidence 44555555554 356999999999 999999999999 34789999999776522 111110 11
Q ss_pred HHHHhcCCCccccccceeeecHHHHHHhhhcc--------cCcccchhhHHHHHHHHCCCcEE
Q psy3650 346 LTQLLLRPGVSDLTGSFRLYKKQVLENLVSSC--------VSKGYVFQMEMVIRARQYNYTIG 400 (435)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--------~~~~~~~D~el~lr~~~~G~~i~ 400 (435)
+.....+.++.++++||++++|++++.+..-. .....+||..+|..+...|+-+.
T Consensus 104 y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~ 166 (203)
T 2c0n_A 104 WEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALS 166 (203)
T ss_dssp BCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEE
T ss_pred HHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEecccccccccc
Confidence 11223344788999999999999999983211 12455689999998888888773
No 36
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=98.22 E-value=3.9e-07 Score=73.70 Aligned_cols=131 Identities=16% Similarity=0.206 Sum_probs=87.2
Q ss_pred CCceEEEccCCCCCCHHHHHHHHHhh----ccCCEEEEEcCC---CCCCCCcHHHHHHHHhcCCCcEEEEeeeecCCCcc
Q psy3650 33 GSEKIVLKPRKKKLGLGTAYMHGLKY----ATGNFIIIMDAD---LSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVY 105 (435)
Q Consensus 33 ~~~~i~~~~~~~n~g~~~a~n~gl~~----a~gd~i~~lD~D---~~~~~~~l~~~~~~~~~~~~~~v~g~~~~~~~~~~ 105 (435)
+.+.+.+... ..=...|||..+.. ...|+++|+|+| ..++|+.+.++++ .++|+|.|++.....+
T Consensus 24 ~gi~~~l~~~--~SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl~----~g~DVV~GsYp~K~~~-- 95 (203)
T 2c0n_A 24 NDIEYVILSR--RNHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKFN----EGYDVVCGYYYLKTLR-- 95 (203)
T ss_dssp TTCCEEEECC--CSCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHHH----HTCSEEEEECBCTTSS--
T ss_pred CCCeEEEEcc--ccchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHHh----CCCCEEEEEeeccCCC--
Confidence 3455665443 33477888988766 345999999999 9999999999994 6899999998776533
Q ss_pred CcccchhhhhchHHHHHHHHhCCCccccccceehhhHHHHHHhhcccc--------ccCchhhHHHHHHHHhhcceeEee
Q psy3650 106 GWDFKRKLVSRGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLVSSCV--------SKGYVFQMEMVIRARQYNYTIGEV 177 (435)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~d~~l~~r~~~~g~~~~~~ 177 (435)
+...... .+.....+.++.+.++||++++|++++.+-...+ ....++|..++..+...|+-+..+
T Consensus 96 ~~s~~a~-------~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~ 168 (203)
T 2c0n_A 96 GYSVYRK-------DWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSL 168 (203)
T ss_dssp SBSEESS-------SBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEE
T ss_pred ccchHHH-------HHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEecccccccccccc
Confidence 1111111 0001112336788899999999999999833322 234456777887777778876544
Q ss_pred e
Q psy3650 178 P 178 (435)
Q Consensus 178 ~ 178 (435)
.
T Consensus 169 ~ 169 (203)
T 2c0n_A 169 K 169 (203)
T ss_dssp E
T ss_pred c
Confidence 3
No 37
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.73 E-value=2.1e-05 Score=71.63 Aligned_cols=75 Identities=15% Similarity=0.114 Sum_probs=57.1
Q ss_pred CeEEEEEeCCCCcChHHHHHHHHHHhCCceEEEcc---------CCCCCCHH----------HHHHHHHhhccCCEEEEE
Q psy3650 7 PYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKP---------RKKKLGLG----------TAYMHGLKYATGNFIIIM 67 (435)
Q Consensus 7 ~~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~---------~~~n~g~~----------~a~n~gl~~a~gd~i~~l 67 (435)
++||||.||||.++|.++++++..+ |..+. .+.|.|.. .++|.++..+.+++++++
T Consensus 32 ~~~iivsdDgs~~~~~~vi~~~~~~-----I~~~~~~d~~~~~~~~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiL 106 (343)
T 1fo8_A 32 LFPIIVSQDCGHEETAQVIASYGSA-----VTHIRQPDLSNIAVQPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVV 106 (343)
T ss_dssp TSCEEEEECTTCHHHHHHHHTTGGG-----SEEEECSCCCCCCCCTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEE
T ss_pred CcEEEEEECCCCHHHHHHHHHcCCc-----eEEEEcCCccccccchhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEE
Confidence 5899999999999999999887531 22211 34565643 567777777789999999
Q ss_pred cCCCCCCCCcHHHHHHHHh
Q psy3650 68 DADLSHHPKFIPEMIKLQQ 86 (435)
Q Consensus 68 D~D~~~~~~~l~~~~~~~~ 86 (435)
|+|..+.|++++-+.+.+.
T Consensus 107 EDDl~~spdF~~y~~~~l~ 125 (343)
T 1fo8_A 107 EDDLEVAPDFFEYFQATYP 125 (343)
T ss_dssp ETTEEECTTHHHHHHHHHH
T ss_pred cCCCeECHHHHHHHHHHHH
Confidence 9999999999977666663
No 38
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=96.91 E-value=0.0024 Score=56.08 Aligned_cols=194 Identities=13% Similarity=0.124 Sum_probs=100.6
Q ss_pred CcceEEEEeccCCCCChH-H---------HHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCC
Q psy3650 199 KNKYTVLLPTYNEKENLP-I---------IVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRK 268 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~-~---------~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~ 268 (435)
.+++.+|||+.....++. + ++....+.+.+.. .-+|+|+-+ .+. ++++...+ +.++......
T Consensus 16 ~M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~~~-i~~IvV~t~--~~~----i~~~~~~~-g~~v~~~~~~ 87 (264)
T 3k8d_A 16 HMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG-AERIIVATD--HED----VARAVEAA-GGEVCMTRAD 87 (264)
T ss_dssp --CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHTT-CSEEEEEES--CHH----HHHHHHHT-TCEEEECCTT
T ss_pred CCceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHhCC-CCEEEEECC--HHH----HHHHHHHc-CCEEEEecCC
Confidence 346788888877776665 1 2222222233222 237777764 222 33333333 3455544334
Q ss_pred CCCCHHHHHHHHHhhc---cCCEEEEEeCCCC-CCCccHHHHHHHHhcCCCceEEeeeEECC----------------Cc
Q psy3650 269 KKLGLGTAYMHGLKYA---TGNFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGTRYVGT----------------GG 328 (435)
Q Consensus 269 ~n~g~~~a~n~g~~~a---~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~~~~~~----------------~~ 328 (435)
...|.+. +..+++.. ..|+++++++|.- ++++.+.++++.+.+.+.++++......+ ++
T Consensus 88 ~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g 166 (264)
T 3k8d_A 88 HQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEG 166 (264)
T ss_dssp CCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECTTS
T ss_pred CCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECCCC
Confidence 4455554 55555544 5699999999994 88999999999987766666554332211 11
Q ss_pred eeccchhHHHHHHHHHHHHHHh-cCCCccccccceeeecHHHHHHhhhcccCcccc--hhhHHHHHHHHCCCcEEEeee
Q psy3650 329 VYGWDFKRKLVSRGANYLTQLL-LRPGVSDLTGSFRLYKKQVLENLVSSCVSKGYV--FQMEMVIRARQYNYTIGEVPI 404 (435)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~--~D~el~lr~~~~G~~i~~~p~ 404 (435)
..-+ +.++-............ ..........|..+|++++++.+..... ..+. +..| .+|+.++|++|..+..
T Consensus 167 ~~l~-fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~-~~lE~~e~le-qlr~le~G~~I~~~~~ 242 (264)
T 3k8d_A 167 YALY-FSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQP-SPLEHIEMLE-QLRVLWYGEKIHVAVA 242 (264)
T ss_dssp BEEE-EESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCC-CHHHHHHTCT-THHHHHTTCCEEEEEC
T ss_pred eEEE-EecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCC-ChhhhHHHHH-HHHHHHCCCceEEEEe
Confidence 0000 00000000000000000 0011234466789999999999854221 1121 2222 2678899999987643
No 39
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=96.72 E-value=0.0034 Score=54.83 Aligned_cols=160 Identities=14% Similarity=0.129 Sum_probs=83.0
Q ss_pred EEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc---cCCEEEEEeCCCC-CCCccHHHHHHH
Q psy3650 234 EIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA---TGNFIIIMDADLS-HHPKFIPEMIKL 309 (435)
Q Consensus 234 eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a---~~d~v~~~d~D~~-~~~~~l~~~~~~ 309 (435)
+|+|+-+ .+. ++++...+ +.+++....+...|.+. +..+++.. ..|.++++++|.- ++++.+.++++.
T Consensus 51 ~VvVvt~--~~~----i~~~~~~~-g~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~ 122 (256)
T 3tqd_A 51 EVVIATD--DKR----IRQVAEDF-GAVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAED 122 (256)
T ss_dssp EEEEEES--CHH----HHHHHHHT-TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHH
T ss_pred EEEEECC--HHH----HHHHHHHc-CCeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHH
Confidence 7777754 222 33333333 34555543344456554 56677765 4699999999994 889999999998
Q ss_pred HhcC-CCceEEeeeEEC----------------CCceeccchhHHHHHHHHHHH-HHHhc-CCCccccccceeeecHHHH
Q psy3650 310 QQQE-NLDVVTGTRYVG----------------TGGVYGWDFKRKLVSRGANYL-TQLLL-RPGVSDLTGSFRLYKKQVL 370 (435)
Q Consensus 310 ~~~~-~~~~v~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~r~~~ 370 (435)
+.++ +.++++...... .++.. ..+.++-........ ..... .........|..+|+++++
T Consensus 123 ~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~-l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l 201 (256)
T 3tqd_A 123 LDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYA-LYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFL 201 (256)
T ss_dssp HHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBE-EEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHH
T ss_pred HHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEE-eEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHH
Confidence 8753 445544332211 01100 000000000000000 00000 0011234667899999999
Q ss_pred HHhhhcccCcccchhhHH--HHHHHHCCCcEEEeee
Q psy3650 371 ENLVSSCVSKGYVFQMEM--VIRARQYNYTIGEVPI 404 (435)
Q Consensus 371 ~~~~~~~~~~~~~~D~el--~lr~~~~G~~i~~~p~ 404 (435)
+.+..... . ..|..|- .+|+.++|++|.....
T Consensus 202 ~~~~~l~~-s-~lE~~e~leqlr~le~G~~i~~~~~ 235 (256)
T 3tqd_A 202 EEYLSWDA-C-PAEKMEALEQLRILWHGGRIHMVVA 235 (256)
T ss_dssp HHHHHSCC-C-HHHHHHTCTTHHHHHTTCCCEEEEC
T ss_pred HHHHhCCC-C-cccchhhhHHHHHHHCCCeEEEEEe
Confidence 99854221 1 1222221 2678999999988765
No 40
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=95.74 E-value=0.026 Score=49.61 Aligned_cols=139 Identities=9% Similarity=0.011 Sum_probs=79.6
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHH
Q psy3650 260 EKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLV 339 (435)
Q Consensus 260 ~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 339 (435)
+.+.+...+...|.+.++..++.....+.++++++|..+. ..+.++++.+.+.+.++++......+... +.....-.
T Consensus 97 ~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~~~~~~~~~~~~~~~--~g~v~~d~ 173 (269)
T 4ecm_A 97 VSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVEEFTNQKEGAKVLLQSVDDPER--FGVANIQN 173 (269)
T ss_dssp CEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHHHHHTSSSSEEEEEEECSCGGG--SEEEEEET
T ss_pred ceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHHHHHhcCCCeEEEEEECCCCCC--ceEEEEcC
Confidence 3565555566778999999998887789999999999765 77889998887666676655443322111 10000000
Q ss_pred HHHHHHHHHHhcCCCccccccceeeecHHHHHHhhhcccC-cccchhhHHHHHHHHCCCcEEEee
Q psy3650 340 SRGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLVSSCVS-KGYVFQMEMVIRARQYNYTIGEVP 403 (435)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~~D~el~lr~~~~G~~i~~~p 403 (435)
.+...+ .............+|+.+|++++|+.+...... .+-.+-.+++-++...| ++...+
T Consensus 174 g~v~~~-~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~ge~~l~d~l~~l~~~g-~v~~~~ 236 (269)
T 4ecm_A 174 RKIIEI-EEKPKEPKSSYAVTGIYLYDSKVFSYIKELKPSARGELEITDINNWYLKRG-VLTYNE 236 (269)
T ss_dssp TEEEEE-EESCSSCSCSEEEEEEEEECTTHHHHHTSCCBCTTSCBCHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEE-EECCCCCCCcEEEEEEEEECHHHHHhhhhcCCCCCCeeeHHHHHHHHHHcC-CEEEEE
Confidence 000000 000001122345678889999999777322111 11122356666777777 665544
No 41
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=95.65 E-value=0.17 Score=43.88 Aligned_cols=174 Identities=9% Similarity=0.040 Sum_probs=90.9
Q ss_pred ChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc---cCCEEE
Q psy3650 214 NLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA---TGNFII 290 (435)
Q Consensus 214 ~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a---~~d~v~ 290 (435)
.+..+++.+.+ .. .-+|+|+-+ .+ .++++...+ ++++.....+...|.+. ...+++.. ..|.++
T Consensus 29 li~~~l~~l~~----~~-~~~ivVv~~--~~----~i~~~~~~~-g~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vl 95 (252)
T 3oam_A 29 MIQWVYEQAMQ----AG-ADRVIIATD--DE----RVEQAVQAF-GGVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVV 95 (252)
T ss_dssp HHHHHHHHHHH----TT-CSEEEEEES--CH----HHHHHHHHT-TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEE
T ss_pred HHHHHHHHHHh----CC-CCeEEEECC--HH----HHHHHHHHc-CCEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEE
Confidence 44455555443 22 237777764 12 233333333 34665544444566665 34455544 469999
Q ss_pred EEeCCC-CCCCccHHHHHHHHhcCCCceEEeeeEECC----------------CceeccchhHHHHHHHHHHHHHHhc-C
Q psy3650 291 IMDADL-SHHPKFIPEMIKLQQQENLDVVTGTRYVGT----------------GGVYGWDFKRKLVSRGANYLTQLLL-R 352 (435)
Q Consensus 291 ~~d~D~-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~-~ 352 (435)
++++|. .++++.+.++++.+.+++.++++......+ ++... .+.++-............. .
T Consensus 96 v~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~g~v~-~fsr~~i~~~~~~~~~~~~~~ 174 (252)
T 3oam_A 96 NVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYAL-YFSRATIPWDRDNFAKADKAI 174 (252)
T ss_dssp ECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEECTTSBEE-EEESSCSSCCHHHHHSSSCCC
T ss_pred EEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEECCCCeEE-EEeCCCCCCCCCccccccccc
Confidence 999999 488999999999887666666554433221 11000 0000000000000000000 0
Q ss_pred CCccccccceeeecHHHHHHhhhcccCccc--chhhHHHHHHHHCCCcEEEee
Q psy3650 353 PGVSDLTGSFRLYKKQVLENLVSSCVSKGY--VFQMEMVIRARQYNYTIGEVP 403 (435)
Q Consensus 353 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~--~~D~el~lr~~~~G~~i~~~p 403 (435)
........|..+|++++++.+..... ..+ .|..|. +|+.+.|+++..++
T Consensus 175 ~~~~~~n~GiY~~~~~~l~~~~~~~~-~~~e~~E~le~-lr~l~~G~~i~~~~ 225 (252)
T 3oam_A 175 VQPLLRHIGIYAYRAGFINTYLDWQP-SQLEKIECLEQ-LRVLWHGEKIHVAV 225 (252)
T ss_dssp CSCEEEEEEEEEEETTHHHHHHHSCC-CHHHHHHTCTT-HHHHHTTCCEEEEE
T ss_pred cccceEEEEEEEcCHHHHHHHHcCCC-CcccccchhHH-HHHHHCCCeEEEEE
Confidence 12334577889999999999853221 111 122232 46778899998764
No 42
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=95.58 E-value=0.08 Score=45.58 Aligned_cols=103 Identities=11% Similarity=0.033 Sum_probs=65.8
Q ss_pred CCCcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCC--CcchHHHHHHHHHHhCCceEEEecCC--CCCC
Q psy3650 197 SVKNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGS--PDGTLDAAKQLQSIYGSEKIVLKPRK--KKLG 272 (435)
Q Consensus 197 ~~~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~i~~~~~~--~n~g 272 (435)
...|.|-+|.|+|.+......+ ..+...+..- +++..|||+|+. ++.+.++|++. ++..+.+..+ .++-
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~L-tRLa~TL~~V-p~L~WIVVEd~~~~t~~va~lL~rs-----Gl~y~HL~~~~p~~~~ 90 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAEL-VRLSQTLSLV-PRLHWLLVEDAEGPTPLVSGLLAAS-----GLLFTHLVVLTPKAQR 90 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHH-HHHHHHHTTS-SSEEEEEEESSSSCCHHHHHHHHHH-----CSEEEEEECCCC----
T ss_pred CCCCeEEEEeCCCCCcchhHHH-HHHHHHHhcC-CceEEEEEcCCCCCCHHHHHHHHHc-----CCceEEeccCCCcccc
Confidence 3468899999999987665543 3455555554 489999999964 45666766654 2334433322 2211
Q ss_pred ------------HHHHHHHHHhhcc-----------------CCEEEEEeCCCCCCCccHHHH
Q psy3650 273 ------------LGTAYMHGLKYAT-----------------GNFIIIMDADLSHHPKFIPEM 306 (435)
Q Consensus 273 ------------~~~a~n~g~~~a~-----------------~d~v~~~d~D~~~~~~~l~~~ 306 (435)
....+|.|++..+ .-+|.|.|+|+.++.+.+++|
T Consensus 91 ~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 91 LREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp -------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 1467999997765 146788899999998877774
No 43
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=94.72 E-value=1.4 Score=38.10 Aligned_cols=155 Identities=13% Similarity=0.125 Sum_probs=81.2
Q ss_pred EEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc---cCCEEEEEeCCC-CCCCccHHHHHHH
Q psy3650 234 EIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA---TGNFIIIMDADL-SHHPKFIPEMIKL 309 (435)
Q Consensus 234 eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a---~~d~v~~~d~D~-~~~~~~l~~~~~~ 309 (435)
+|+|+-+. + .+.++...+ +..+.........|. .++..+++.. ..|+++++++|. .++++.|.++++.
T Consensus 44 ~vvVvt~~--~----~i~~~~~~~-g~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~ 115 (253)
T 4fcu_A 44 DLCVATDD--E----RIAEICRAE-GVDVVLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKL 115 (253)
T ss_dssp EEEEEESC--H----HHHHHHHTT-TCCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHH
T ss_pred EEEEECCH--H----HHHHHHHHc-CCeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHH
Confidence 77777642 2 233333332 335544333333344 4566677665 359999999999 5889999999999
Q ss_pred HhcC-CCceEEeeeE----------------ECCCceeccchhHHHHHHHHHHHHHHhcC------CCccccccceeeec
Q psy3650 310 QQQE-NLDVVTGTRY----------------VGTGGVYGWDFKRKLVSRGANYLTQLLLR------PGVSDLTGSFRLYK 366 (435)
Q Consensus 310 ~~~~-~~~~v~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 366 (435)
+.+. +.++++.... ...++..-+ +.+.-.. ..+-... ........|..+|+
T Consensus 116 ~~~~~~~~~at~~~~~~~~~~~~~p~~~kvv~d~~g~~l~-fsr~~ip-----~~r~~~~~~~~~~~~~~~~~~GiY~f~ 189 (253)
T 4fcu_A 116 LVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALY-FSRATIP-----YDRDGAKRDEPTLHTQAFRHLGLYAYR 189 (253)
T ss_dssp HHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECTTSBEEE-EESSCCS-----CCTTTSSSSSCCCCSCCEEEEEEEEEE
T ss_pred HHhCCCCCEEEEeEEcCCHHHccCCCccEEEECCCCeEEE-ecCCCCC-----CCCCcccccccccccceeEEEEEEEeC
Confidence 8764 3444433211 111110000 0000000 0000000 11223466789999
Q ss_pred HHHHHHhhhcccCcccchhhHH--HHHHHHCCCcEEEeee
Q psy3650 367 KQVLENLVSSCVSKGYVFQMEM--VIRARQYNYTIGEVPI 404 (435)
Q Consensus 367 r~~~~~~~~~~~~~~~~~D~el--~lr~~~~G~~i~~~p~ 404 (435)
+++++++.... .+-.|-.|. .+|+.++|++|..+..
T Consensus 190 ~~~l~~~~~~~--~~~le~~e~le~lr~l~~G~~I~~~~~ 227 (253)
T 4fcu_A 190 VSLLQEYVTWE--MGKLEKLESLEQLRVLENGHRIAIAVA 227 (253)
T ss_dssp HHHHHHHTTSC--CCHHHHHHTCTTHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHhCC--CCcccchhHHHHHHHHHCCCceEEEEe
Confidence 99999985321 222222222 2467789999988765
No 44
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=94.46 E-value=0.19 Score=42.78 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=67.6
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCC--CcchHHHHHHHHHHhCCceEEEecCCC--C----
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGS--PDGTLDAAKQLQSIYGSEKIVLKPRKK--K---- 270 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~i~~~~~~~--n---- 270 (435)
.|.|-+|.|+|.+......+ ..+...+... +++..|||+|+. ++.+.++|++. ++..+.+..+. +
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~L-tRLa~TL~~V-p~L~WIVVEd~~~~t~~va~lL~~s-----gl~y~HL~~~~p~~~~~~ 74 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAEL-TRMANTLLHV-PNLHWLVVEDAPRRTPLTARLLRDT-----GLNYTHLHVETPRNYKLR 74 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHH-HHHHHHHTTS-SSEEEEEEESSSSCCHHHHHHHHHH-----CCEEEEEECCCCHHHHCC
T ss_pred CCEEEEEeCCCCccchhHHH-HHHhhhhccC-CceEEEEEeCCCCCCHHHHHHHHHc-----CCceEEeecCCCcccccc
Confidence 47789999999987655543 3444445443 589999999965 46667777654 33444443321 1
Q ss_pred --------CCHHHHHHHHHhhcc---------CCEEEEEeCCCCCCCccHHHHH
Q psy3650 271 --------LGLGTAYMHGLKYAT---------GNFIIIMDADLSHHPKFIPEMI 307 (435)
Q Consensus 271 --------~g~~~a~n~g~~~a~---------~d~v~~~d~D~~~~~~~l~~~~ 307 (435)
.--...+|.|++..+ .-+|.|.|+|+.++.+.+++|-
T Consensus 75 ~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 75 GDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp -------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred ccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 112367899998753 2567888999999988888764
No 45
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=94.23 E-value=0.47 Score=40.28 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=39.1
Q ss_pred CHHHHHHHHHhhc-cCCEEEEEeCCCC-CCCccHHHHHHHHhcCCCceEEee
Q psy3650 272 GLGTAYMHGLKYA-TGNFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGT 321 (435)
Q Consensus 272 g~~~a~n~g~~~a-~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~ 321 (435)
+...++..|++.. ..|+++++++|.- ++++.+..+++.+.+.+.+.+...
T Consensus 80 ~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 80 TSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp CHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred cHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 4446778888876 5799999999995 788999999998876666655443
No 46
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=94.19 E-value=0.093 Score=45.38 Aligned_cols=115 Identities=13% Similarity=0.186 Sum_probs=71.3
Q ss_pred eEEEccCCC--CCCHHHHHHHHHhhcc--CCEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEEEEeeeecCCCccCcccch
Q psy3650 36 KIVLKPRKK--KLGLGTAYMHGLKYAT--GNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKR 111 (435)
Q Consensus 36 ~i~~~~~~~--n~g~~~a~n~gl~~a~--gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~ 111 (435)
.|.++.+.. ....+..+|.|+..|. .|+++|-|-|..+..+.. . +.+... ..+ +
T Consensus 85 ~I~VieQ~~~~~FNRa~LlNvGf~ea~~~~d~~ifHDVDLlP~dd~n----------~----Y~c~~~--~~P------~ 142 (287)
T 3lw6_A 85 HIFVLNQVDRFRFNRASLINVGFQFASDVYDYIAMHDVDLLPLNDNL----------L----YEYPSS--LGP------L 142 (287)
T ss_dssp EEEEEEECSSSCCCHHHHHHHHHHHSCTTCCEEEEECTTEEECCTTS----------C----CCCCCT--TCC------E
T ss_pred EEEEEecCCCCccchhheecccHHHHhccCCEEEEecccccccCCCc----------c----ccCCCC--CCc------e
Confidence 455554433 4578999999999987 499999999986543211 0 111000 000 0
Q ss_pred hhhhchHHHHHHHHhCCCccccccceehhhHHHHHHhhccc-cccCc-hhhHHHHHHHHhhcceeEeee
Q psy3650 112 KLVSRGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLVSSC-VSKGY-VFQMEMVIRARQYNYTIGEVP 178 (435)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~d~~l~~r~~~~g~~~~~~~ 178 (435)
.+... ..-.........||..+++++.+.+++++. ...+| .+|.|+..|+...|+++...+
T Consensus 143 Hls~~------~~~~~~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~ 205 (287)
T 3lw6_A 143 HIAGP------KLHPKYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQ 205 (287)
T ss_dssp ESSCT------TTCSSCCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCS
T ss_pred EEeec------cccCCCCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCC
Confidence 11100 001122345556888899999999996554 34444 568999999999999987654
No 47
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=94.16 E-value=0.49 Score=40.13 Aligned_cols=102 Identities=11% Similarity=0.084 Sum_probs=65.8
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCc--chHHHHHHHHHHhCCceEEEecCC--CCCC--
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPD--GTLDAAKQLQSIYGSEKIVLKPRK--KKLG-- 272 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d--~t~~~~~~~~~~~~~~~i~~~~~~--~n~g-- 272 (435)
.|.|-+|.|+|.+...... |..+...+..- +++..|||+|+..- .+.++|++- ++..+.+..+ .++.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~V-p~l~WIVVEd~~~~~~~v~~lL~~s-----gl~y~HL~~~~~~~~~~~ 74 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAE-LTRLANTFRQV-AQLHWILVEDAAARSELVSRFLARA-----GLPSTHLHVPTPRRYKRP 74 (246)
T ss_dssp CCCEEEEEEECCSTTHHHH-HHHHHHHHTTS-TTEEEEEEESSSSCCHHHHHHHHHS-----CSCEEEEECCCCCC----
T ss_pred CCEEEEEeCCCCccchhHH-HHHHHHHHhcC-CceEEEEEcCCCCCCHHHHHHHHHc-----CCceEEEecCCccccCCC
Confidence 4678899999998765544 33455555544 35889999997653 234555442 3344444322 1211
Q ss_pred ----HHHHHHHHHhhcc---------CCEEEEEeCCCCCCCccHHHHH
Q psy3650 273 ----LGTAYMHGLKYAT---------GNFIIIMDADLSHHPKFIPEMI 307 (435)
Q Consensus 273 ----~~~a~n~g~~~a~---------~d~v~~~d~D~~~~~~~l~~~~ 307 (435)
....+|.|++..+ .-+|.|.|+|+.++.+.+++|-
T Consensus 75 ~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR 122 (246)
T 2d0j_A 75 GLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMR 122 (246)
T ss_dssp CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHT
T ss_pred CCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHh
Confidence 2378899997642 3678999999999988888864
No 48
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=94.04 E-value=0.82 Score=39.10 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=55.9
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhccCCEEE
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFII 290 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v~ 290 (435)
....+..+++.+.+ ....-+|+|+-+. +. +.+....+ ++.++..+.+...|.+.+. .+++....+.++
T Consensus 26 g~pli~~~i~~~~~----~~~~~~ivvv~~~--~~----i~~~~~~~-~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~l 93 (245)
T 1h7e_A 26 GKPMIQHVYERALQ----VAGVAEVWVATDD--PR----VEQAVQAF-GGKAIMTRNDHESGTDRLV-EVMHKVEADIYI 93 (245)
T ss_dssp TEEHHHHHHHHHHT----CTTCCEEEEEESC--HH----HHHHHHHT-TCEEEECCSCCSSHHHHHH-HHHHHSCCSEEE
T ss_pred CchHHHHHHHHHHh----CCCCCeEEEECCc--HH----HHHHHHHc-CCeEEeCCCccCCcHHHHH-HHHHhCCCCEEE
Confidence 33445555555433 2211377777643 22 33333333 3344332222234554444 555655679999
Q ss_pred EEeCCCC-CCCccHHHHHHHHhcC-CCceEEe
Q psy3650 291 IMDADLS-HHPKFIPEMIKLQQQE-NLDVVTG 320 (435)
Q Consensus 291 ~~d~D~~-~~~~~l~~~~~~~~~~-~~~~v~~ 320 (435)
++++|.. ++++.+..+++.+.+. +.++++.
T Consensus 94 v~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~ 125 (245)
T 1h7e_A 94 NLQGDEPMIRPRDVETLLQGMRDDPALPVATL 125 (245)
T ss_dssp ECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEE
Confidence 9999996 6889999999988765 5665443
No 49
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=93.79 E-value=0.19 Score=42.72 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=38.7
Q ss_pred CCCHHHHHHHHHhhcc--CCEEEEEeCCCC-CCCccHHHHHHHHhcCCCceEEee
Q psy3650 270 KLGLGTAYMHGLKYAT--GNFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGT 321 (435)
Q Consensus 270 n~g~~~a~n~g~~~a~--~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~ 321 (435)
..|...++..|++... .|.++++++|.. ++++.+..+++.+.+.+.++++..
T Consensus 79 ~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~ 133 (228)
T 1ezi_A 79 TASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSA 133 (228)
T ss_dssp -CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEE
T ss_pred CCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 3456778888888763 589999999985 788899999987765555555543
No 50
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=93.66 E-value=0.27 Score=40.57 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=50.4
Q ss_pred EEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc--cCCEEEEEeCCCC-CCCccHHHHHHHH
Q psy3650 234 EIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA--TGNFIIIMDADLS-HHPKFIPEMIKLQ 310 (435)
Q Consensus 234 eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a--~~d~v~~~d~D~~-~~~~~l~~~~~~~ 310 (435)
+|+|+.+...+ .++++.... ++.+... .....|.+.++..|++.. ..++++++++|.. ++++.+..+++.
T Consensus 48 ~i~vv~~~~~~----~~~~~~~~~-~~~~~~~-~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~- 120 (199)
T 2waw_A 48 QLIVTLGGAAD----EVLEKVELD-GLDIVLV-DDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG- 120 (199)
T ss_dssp EEEEEECTTHH----HHHHHSCCT-TSEEEEC-CCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH-
T ss_pred cEEEEeCCCHH----HHHHHhccC-CCEEEEC-CCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh-
Confidence 77777543221 233332221 3344332 223457788899999887 5699999999996 688999999988
Q ss_pred hcCCCceEEe
Q psy3650 311 QQENLDVVTG 320 (435)
Q Consensus 311 ~~~~~~~v~~ 320 (435)
. .+.++++.
T Consensus 121 ~-~~~~~~~~ 129 (199)
T 2waw_A 121 G-RGATIAVC 129 (199)
T ss_dssp H-TTCSEEEE
T ss_pred c-CCCCEEEE
Confidence 4 45555543
No 51
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=93.65 E-value=0.82 Score=38.77 Aligned_cols=87 Identities=14% Similarity=0.099 Sum_probs=53.0
Q ss_pred CChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhccCCEEEEE
Q psy3650 213 ENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIM 292 (435)
Q Consensus 213 ~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v~~~ 292 (435)
..+..+++.+.+. .. +|+|+-+. + .+.+..... ..+...+.....|.+.+. .+++....|+++++
T Consensus 28 pli~~~l~~~~~~-----~~-~i~v~~~~--~----~i~~~~~~~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~ 92 (234)
T 2y6p_A 28 PLIRWVVEGLVKT-----GE-RVILATDS--E----RVKEVVEDL--CEVFLTPSDLPSGSDRVL-YVVRDLDVDLIINY 92 (234)
T ss_dssp EHHHHHHHHHHTT-----TS-CEEEEESC--H----HHHHHHTTT--SEEEECCTTCCSHHHHHH-HHHTTCCCSEEEEC
T ss_pred EHHHHHHHHHHHh-----CC-EEEEECCh--H----HHHHHHHhc--eEEEECCcccccchHHHH-HHHHhCCCCEEEEe
Confidence 4455555555432 12 66666543 2 233333332 355443333345666655 56676677999999
Q ss_pred eCCC-CCCCccHHHHHHHHhcCC
Q psy3650 293 DADL-SHHPKFIPEMIKLQQQEN 314 (435)
Q Consensus 293 d~D~-~~~~~~l~~~~~~~~~~~ 314 (435)
++|. .+++..+..+++.+.+.+
T Consensus 93 ~~D~P~~~~~~i~~l~~~~~~~~ 115 (234)
T 2y6p_A 93 QGDEPFVYEEDIKLIFRELEKGE 115 (234)
T ss_dssp CTTCCCCCHHHHHHHHHHHHHTC
T ss_pred cCCcCcCCHHHHHHHHHHHHhCC
Confidence 9999 678899999999876655
No 52
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=93.40 E-value=0.25 Score=47.65 Aligned_cols=191 Identities=14% Similarity=0.163 Sum_probs=108.5
Q ss_pred EEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc
Q psy3650 205 LLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA 284 (435)
Q Consensus 205 vip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a 284 (435)
++|+.|. ..|...|+.+.+. . .-+|+||-.-..+.-.+.+.++.... ...+.++..++..|.+.|+..++...
T Consensus 34 l~pv~gk-p~i~~~l~~~~~~----g-~~~i~vv~~~~~~~i~~~~~~~~~~~-~~~i~~~~q~~~lGTa~Av~~a~~~l 106 (501)
T 3st8_A 34 LHTLAGR-SMLSHVLHAIAKL----A-PQRLIVVLGHDHQRIAPLVGELADTL-GRTIDVALQDRPLGTGHAVLCGLSAL 106 (501)
T ss_dssp GCEETTE-EHHHHHHHHHHHH----C-CSEEEEEECTTHHHHHHHHHHHHHHH-TSCCEEEECSSCCCHHHHHHHHHTTS
T ss_pred HeEECCh-hHHHHHHHHHHhC----C-CCEEEEEeCCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCCcHHHHHHHHHHh
Confidence 3555654 3566677766552 1 23777776543344444444433333 23555565777889999999999987
Q ss_pred cC---CEEEEEeCCC-CCCCccHHHHHHHHhcCCCceEEeeeEECCCceecc------chhHHHHHHHHHHHHHHhcCCC
Q psy3650 285 TG---NFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGW------DFKRKLVSRGANYLTQLLLRPG 354 (435)
Q Consensus 285 ~~---d~v~~~d~D~-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 354 (435)
.. +.++++.+|. .+..+.+..|++..+..+.++.+......+...++. .....+..+....-. ...
T Consensus 107 ~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~~~~g~v~~ivEk~~~~~~----~~~ 182 (501)
T 3st8_A 107 PDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEVMAIVEQTDATPS----QRE 182 (501)
T ss_dssp CTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTTCCEEEEECGGGCCHH----HHH
T ss_pred ccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccCCchhccccccccceeEEeeccccCCChh----hcc
Confidence 54 4677777877 477888999999887767776655443333211110 000000000000000 001
Q ss_pred ccccccceeeecHHHHHHhhhcc---cCcccchhhHHHHHHHHCCCcEEEeeeEE
Q psy3650 355 VSDLTGSFRLYKKQVLENLVSSC---VSKGYVFQMEMVIRARQYNYTIGEVPISF 406 (435)
Q Consensus 355 ~~~~~~~~~~~~r~~~~~~~~~~---~~~~~~~D~el~lr~~~~G~~i~~~p~~~ 406 (435)
.....+|.++|+.+.++++.... ....-.+-.+....+...|..+.......
T Consensus 183 i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~~~~g~~v~~~~~~~ 237 (501)
T 3st8_A 183 IREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASHVDD 237 (501)
T ss_dssp CCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHHHHTTCCEEEEECSS
T ss_pred ceeeeceeeeecchhHHHhhhhhcccccccccchhhHHHHHHhcCceEEEEeccc
Confidence 22356777899999998885321 12233345666667888898887665543
No 53
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=92.58 E-value=0.28 Score=46.68 Aligned_cols=179 Identities=9% Similarity=0.048 Sum_probs=93.2
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhcc-CCEE
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYAT-GNFI 289 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~-~d~v 289 (435)
....+..+++.+.+. . .-+|+++-+... +.++++.... .+.++..+...|.+.++..|++... .+.+
T Consensus 35 g~pli~~~l~~l~~~----~-~~~i~vv~~~~~----~~i~~~~~~~---~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~ 102 (459)
T 4fce_A 35 GKPMVQHVIDAAMKL----G-AQHVHLVYGHGG----ELLKKTLADP---SLNWVLQAEQLGTGHAMQQAAPHFADDEDI 102 (459)
T ss_dssp TEEHHHHHHHHHHHH----T-CSCEEEEESSCH----HHHHHHC--------CEEECSSCCCHHHHHHHHGGGSCTTSEE
T ss_pred CeeHHHHHHHHHHhC----C-CCcEEEEeCCCH----HHHHHHhccC---CcEEEeCCCCCCcHHHHHHHHHhcCCCCcE
Confidence 345566666666543 1 226766654332 2233322221 2333335667788999999999886 4999
Q ss_pred EEEeCCC-CCCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHHHHHHHHHHHHhcC---CCccccccceeee
Q psy3650 290 IIMDADL-SHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLR---PGVSDLTGSFRLY 365 (435)
Q Consensus 290 ~~~d~D~-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 365 (435)
+++++|. .+.++.+.++++.+.+ .++++......+... +.....-..+......+.... .......++..+|
T Consensus 103 lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~--~g~v~~~~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~ 178 (459)
T 4fce_A 103 LMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLDNPSG--YGRIVRENGDVVGIVEHKDASDAQREINEINTGILVA 178 (459)
T ss_dssp EEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSCCTT--SCEEEEETTEEEEEECGGGCCTTGGGCCEEEEEEEEE
T ss_pred EEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecCCCCc--ccEEEeCCCcEEEEEECCCCChHHhhccEEEEEEEEE
Confidence 9999999 4888999999998754 344333322221110 000000000000000000000 0112345677899
Q ss_pred cHHHHHHhhhccc---CcccchhhHHHHHHHHCCCcEEEeeeE
Q psy3650 366 KKQVLENLVSSCV---SKGYVFQMEMVIRARQYNYTIGEVPIS 405 (435)
Q Consensus 366 ~r~~~~~~~~~~~---~~~~~~D~el~lr~~~~G~~i~~~p~~ 405 (435)
+++.+.++..... ..+-.+-.+++-++.+.|.++..++..
T Consensus 179 ~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~ 221 (459)
T 4fce_A 179 NGRDLKRWLSLLDNNNAQGEFYITDIIALAHADGKKIATVHPT 221 (459)
T ss_dssp EHHHHHHHHHTCCCCSTTCSCCTTHHHHHHHHTTCCEEEECCS
T ss_pred EHHHHHHHHHHhCccccCCcEEHHHHHHHHHHCCCeEEEEEcC
Confidence 9998866532111 111122356677788899988877754
No 54
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=92.37 E-value=1.6 Score=36.41 Aligned_cols=95 Identities=14% Similarity=0.208 Sum_probs=61.5
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhccCCEE
Q psy3650 210 NEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFI 289 (435)
Q Consensus 210 n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v 289 (435)
+....++.+++.+.. . +|+||-+. .+.++.+.... ++.++. ......|...++..|++.+ .+++
T Consensus 24 ~G~pli~~~~~~l~~-------~-~vvvv~~~-----~~~~~~~~~~~-~~~~v~-d~~~~~G~~~si~~gl~~~-~~~v 87 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSP-------F-QTVFVCRD-----EKQAEKLSSRY-EAEFIW-DLHKGVGSIAGIHAALRHF-GSCV 87 (208)
T ss_dssp TTEEHHHHHHHHHTT-------S-EEEEECSS-----HHHHHHHHTTS-CSCEEC-CTTCCCSHHHHHHHHHHHH-SSEE
T ss_pred CCeeHHHHHHHHhcC-------C-CEEEEECC-----HHHHHHHHHhc-CCeEEe-cCCCCCChHHHHHHHHHHc-CCCE
Confidence 444555555555422 2 88888642 12333443322 334432 2233457779999999998 9999
Q ss_pred EEEeCCCC-CCCccHHHHHHHHhcCCCceEEee
Q psy3650 290 IIMDADLS-HHPKFIPEMIKLQQQENLDVVTGT 321 (435)
Q Consensus 290 ~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~ 321 (435)
++.+|.- ++++.+..+++.+...+.+++++.
T Consensus 88 -v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~ 119 (208)
T 3ngw_A 88 -VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK 119 (208)
T ss_dssp -EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred -EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 9999995 799999999998865466776654
No 55
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=92.16 E-value=0.42 Score=42.02 Aligned_cols=142 Identities=13% Similarity=0.060 Sum_probs=77.8
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhhccCCEEEEEeCCCCCCCc----cHHHHHHHHhcCCCceEEeeeEECCCceeccchh
Q psy3650 260 EKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPK----FIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFK 335 (435)
Q Consensus 260 ~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v~~~d~D~~~~~~----~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 335 (435)
..+.++..+...|.+.++..++.....+.++++.+|..+.++ .+.++++...+.+. .+++....+......+...
T Consensus 95 ~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v 173 (281)
T 3juk_A 95 CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SIVAIEEVALEEVSKYGVI 173 (281)
T ss_dssp CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CEEEEEECCTTTGGGSEEE
T ss_pred ccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CEEEEEEechhhcccCCEE
Confidence 356566666678999999999988877889999999987777 79999998765454 3333332211111111110
Q ss_pred HHHH-HHHHHHHHHHhc-----CCCccccccceeeecHHHHHHhhhcccC--cccchhhHHHHHHHHCCCcEEEeee
Q psy3650 336 RKLV-SRGANYLTQLLL-----RPGVSDLTGSFRLYKKQVLENLVSSCVS--KGYVFQMEMVIRARQYNYTIGEVPI 404 (435)
Q Consensus 336 ~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~r~~~~~~~~~~~~--~~~~~D~el~lr~~~~G~~i~~~p~ 404 (435)
..-. ......+....- ........+|..+|++++|+.+...... ..+. -.++.-.+...| ++..++.
T Consensus 174 ~~~~~~~g~~~v~~~~Ekp~~~~~~~~~~~~GiYi~~~~~l~~l~~~~~~~~~e~~-l~d~i~~l~~~~-~v~~~~~ 248 (281)
T 3juk_A 174 RGEWLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQ-ITDALRTQAKRK-RIIAYQF 248 (281)
T ss_dssp EEEEEETTEEEEEEEEESCCTTTCSCSEEEEEEEEECTTHHHHHHTCCCCGGGSCC-HHHHHHHHHHHS-CCEEEEC
T ss_pred EeccCCCCceEEeEEEECcCCCCCCcceeEEEEEEECHHHHHHHHhcCCCCCCcee-HHHHHHHHHhcC-CEEEEEe
Confidence 0000 000000000000 0112234677889999999877432111 1222 256666666666 6655554
No 56
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=92.13 E-value=4.3 Score=34.07 Aligned_cols=93 Identities=11% Similarity=0.033 Sum_probs=56.5
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc------
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA------ 284 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a------ 284 (435)
....+..+++.+.+ ....-+|+|+-+...+...+ +.+ .....+.++ .+..|.+.++..|++..
T Consensus 33 gkpli~~~l~~l~~----~~~~~~ivvv~~~~~~~~~~-~~~----~~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~ 101 (231)
T 1vgw_A 33 SKTVLEHVLGIFER----HEAVDLTVVVVSPEDTFADK-VQT----AFPQVRVWK--NGGQTRAETVRNGVAKLLETGLA 101 (231)
T ss_dssp TEEHHHHHHHHHHT----CTTCCEEEEECCTTCSTHHH-HHH----HCTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSS
T ss_pred CeEHHHHHHHHHHc----CCCCCeEEEEECccHHHHHH-HHh----cCCCceEEE--cCCCcHHHHHHHHHHHHhhhccC
Confidence 44455555555533 11123777776443333333 322 211134444 23567888888888876
Q ss_pred -cCCEEEEEeCCCC-CCCccHHHHHHHHhcCC
Q psy3650 285 -TGNFIIIMDADLS-HHPKFIPEMIKLQQQEN 314 (435)
Q Consensus 285 -~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~ 314 (435)
..+.++++++|.. ++++.+..+++.+.+.+
T Consensus 102 ~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 102 AETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp CTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred CCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 4699999999985 78889999999876543
No 57
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=91.97 E-value=0.59 Score=38.75 Aligned_cols=48 Identities=13% Similarity=0.182 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHhhccCCEEEEEeCCC-CCCCccHHHHHHHHhcCCCceEEe
Q psy3650 271 LGLGTAYMHGLKYATGNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVTG 320 (435)
Q Consensus 271 ~g~~~a~n~g~~~a~~d~v~~~d~D~-~~~~~~l~~~~~~~~~~~~~~v~~ 320 (435)
.|...++..|++....++++++++|. .++++.+..+++. ..+.++++.
T Consensus 77 ~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~--~~~~~~~~~ 125 (201)
T 1e5k_A 77 PGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ--RKDAPVVWV 125 (201)
T ss_dssp CSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT--CTTCSEEEE
T ss_pred CCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh--cCCCCEEEE
Confidence 58899999999998889999999999 5889999999887 345566554
No 58
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=91.77 E-value=0.39 Score=39.70 Aligned_cols=50 Identities=18% Similarity=0.297 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHhhccC-CEEEEEeCCCC-CCCccHHHHHHHHhcCCCceEEee
Q psy3650 271 LGLGTAYMHGLKYATG-NFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGT 321 (435)
Q Consensus 271 ~g~~~a~n~g~~~a~~-d~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~ 321 (435)
.|.+.++..|++.... ++++++++|.. ++++.+..+++.+ +.+.++++..
T Consensus 71 ~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~ 122 (197)
T 3d5n_A 71 EGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPT 122 (197)
T ss_dssp GCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEE
T ss_pred CCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEE
Confidence 5788899999998765 89999999994 7889999999877 4555655543
No 59
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=91.75 E-value=0.27 Score=46.95 Aligned_cols=178 Identities=10% Similarity=0.095 Sum_probs=92.3
Q ss_pred CCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhcc--CCEE
Q psy3650 212 KENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYAT--GNFI 289 (435)
Q Consensus 212 ~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~--~d~v 289 (435)
...+..+++.+.+ .. .-+|+++-+.. .+.+++.... .+.+ +..+...|.+.++..|++... .+.+
T Consensus 39 kpli~~~l~~l~~----~g-~~~iivv~~~~----~~~i~~~~~~--~i~~--v~~~~~~G~~~sl~~a~~~~~~~~~~v 105 (468)
T 1hm9_A 39 ISMLEHVFRSVGA----IQ-PEKTVTVVGHK----AELVEEVLAG--QTEF--VTQSEQLGTGHAVMMTEPILEGLSGHT 105 (468)
T ss_dssp EEHHHHHHHHHHT----TC-CSEEEEEECTT----HHHHHHSSSS--SSEE--EECSSCCCHHHHHHTTHHHHTTCCSEE
T ss_pred ccHHHHHHHHHHh----cC-CCCEEEEECCC----HHHHHHHhCC--CcEE--EeCCccCChHHHHHHHHHHhccCCCeE
Confidence 3556666665543 11 23677765432 1222222111 2233 335556788999999988775 6899
Q ss_pred EEEeCCCC-CCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHHHHHHHHHHHHhcC---CCccccccceeee
Q psy3650 290 IIMDADLS-HHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLR---PGVSDLTGSFRLY 365 (435)
Q Consensus 290 ~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 365 (435)
+++++|.. +.++.+.++++.+.+.+.++++......+....+.-.... ..+...+..+.... .......++..+|
T Consensus 106 lv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~~~~~~g~v~~d~-~g~v~~~~ek~~~~~~~~~~~~~~~Giy~f 184 (468)
T 1hm9_A 106 LVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRND-NAEVLRIVEQKDATDFEKQIKEINTGTYVF 184 (468)
T ss_dssp EEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECT-TCCEEEEECTTTCCTTGGGCCEEEEEEEEE
T ss_pred EEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccCCCCceeEEEECC-CCCEEEEEECCCCChHHhcCeEEEEEEEEE
Confidence 99999996 7888999999988766666655433222211000000000 00000000000000 0112345667899
Q ss_pred cHHHHHHhhhcccC----cccchhhHHHHHHHHCCCcEEEeee
Q psy3650 366 KKQVLENLVSSCVS----KGYVFQMEMVIRARQYNYTIGEVPI 404 (435)
Q Consensus 366 ~r~~~~~~~~~~~~----~~~~~D~el~lr~~~~G~~i~~~p~ 404 (435)
+++.+.+....... ..+. -.|++-++.+.|.++..++.
T Consensus 185 ~~~~l~~~l~~~~~~~~~~~~~-~~d~~~~l~~~g~~v~~~~~ 226 (468)
T 1hm9_A 185 DNERLFEALKNINTNNAQGEYY-ITDVIGIFRETGEKVGAYTL 226 (468)
T ss_dssp EHHHHHHHHTTCCSCSTTCSCC-TTHHHHHHHHHTCCEEEEEC
T ss_pred EHHHHHHHHHhhccccCCCeEE-HHHHHHHHHHCCCEEEEEEc
Confidence 99966554211111 1122 25677778888988876544
No 60
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=91.65 E-value=0.37 Score=39.63 Aligned_cols=96 Identities=13% Similarity=0.181 Sum_probs=55.5
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc--cCCE
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA--TGNF 288 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a--~~d~ 288 (435)
....+..+++.+.+. . .-+|+|+-+... +.+++..... ++.++.. .....|...++..|++.. ..++
T Consensus 30 g~pll~~~l~~l~~~----~-~~~i~vv~~~~~----~~~~~~~~~~-~~~~~~~-~~~~~g~~~~i~~al~~~~~~~~~ 98 (197)
T 2wee_A 30 DTTVLGATLDVARQA----G-FDQLILTLGGAA----SAVRAAMALD-GTDVVVV-EDVERGCAASLRVALARVHPRATG 98 (197)
T ss_dssp TEEHHHHHHHHHHHT----T-CSEEEEEECTTH----HHHHHHSCCT-TSEEEEC-C----CCHHHHHHHHTTSCTTEEE
T ss_pred CccHHHHHHHHHHhc----C-CCcEEEEeCCCH----HHHHHHhccC-CCEEEEC-CCcccCHHHHHHHHHHHhcccCCe
Confidence 334555566555431 1 227777754321 2233322221 3344332 223357789999999887 4589
Q ss_pred EEEEeCCCC-CCCccHHHHHHHHhcCCCceEE
Q psy3650 289 IIIMDADLS-HHPKFIPEMIKLQQQENLDVVT 319 (435)
Q Consensus 289 v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~ 319 (435)
++++++|.. ++++.+..+++. . .+.++++
T Consensus 99 vlv~~~D~P~~~~~~i~~l~~~-~-~~~~i~~ 128 (197)
T 2wee_A 99 IVLMLGDQPQVAPATLRRIIDV-G-PATEIMV 128 (197)
T ss_dssp EEEEETTCTTCCHHHHHHHHHH-G-GGSSEEE
T ss_pred EEEEeCCcCCCCHHHHHHHHhh-c-CCCCEEE
Confidence 999999995 788999999988 4 3445443
No 61
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=91.44 E-value=0.7 Score=40.23 Aligned_cols=81 Identities=12% Similarity=0.133 Sum_probs=51.1
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhc---cCCEEEEEcCCC-CCCCCcHHHHHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA---TGNFIIIMDADL-SHHPKFIPEMIK 83 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a---~gd~i~~lD~D~-~~~~~~l~~~~~ 83 (435)
-+|+|+-| . +.++++.+.+ ...+.+.......|.+. ...++... ..|+++++++|. .++++.+..+++
T Consensus 59 ~~IvV~t~--~----~~i~~~~~~~-g~~v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~ 130 (264)
T 3k8d_A 59 ERIIVATD--H----EDVARAVEAA-GGEVCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVAD 130 (264)
T ss_dssp SEEEEEES--C----HHHHHHHHHT-TCEEEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHH
T ss_pred CEEEEECC--H----HHHHHHHHHc-CCEEEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHH
Confidence 47777753 1 2333443333 34555433333445544 45555543 569999999999 678899999999
Q ss_pred HHhcCCCcEEEEe
Q psy3650 84 LQQQENLDVVTGT 96 (435)
Q Consensus 84 ~~~~~~~~~v~g~ 96 (435)
.+.+.++++++..
T Consensus 131 ~~~~~~~~~~~~~ 143 (264)
T 3k8d_A 131 NLAQRQVGMATLA 143 (264)
T ss_dssp HHHTSSCSEEEEE
T ss_pred HHhhcCCCEEEEE
Confidence 9977777665443
No 62
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=90.97 E-value=1.6 Score=37.61 Aligned_cols=81 Identities=10% Similarity=0.140 Sum_probs=52.0
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhc---cCCEEEEEcCCC-CCCCCcHHHHHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA---TGNFIIIMDADL-SHHPKFIPEMIK 83 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a---~gd~i~~lD~D~-~~~~~~l~~~~~ 83 (435)
-+|+|+-|. +.++++.+.+ ...+.+...+...|.+++ ..+++.. ..|+++++++|. .+++..+..+++
T Consensus 43 ~~ivVv~~~------~~i~~~~~~~-g~~v~~~~~~~~~Gt~~~-~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~ 114 (252)
T 3oam_A 43 DRVIIATDD------ERVEQAVQAF-GGVVCMTSPNHQSGTERL-AEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVAD 114 (252)
T ss_dssp SEEEEEESC------HHHHHHHHHT-TCEEEECCTTCCSHHHHH-HHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHH
T ss_pred CeEEEECCH------HHHHHHHHHc-CCEEEEcCCCCCCcHHHH-HHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHH
Confidence 477777531 2334443333 345665444445566664 4445444 469999999999 678999999999
Q ss_pred HHhcCCCcEEEEe
Q psy3650 84 LQQQENLDVVTGT 96 (435)
Q Consensus 84 ~~~~~~~~~v~g~ 96 (435)
.+.+.++++++..
T Consensus 115 ~~~~~~~~~~~~~ 127 (252)
T 3oam_A 115 NLAACSAPMATLA 127 (252)
T ss_dssp HHHHSSCSEEEEE
T ss_pred HHHhcCCCEEEEe
Confidence 9876666665544
No 63
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=90.76 E-value=2.4 Score=36.59 Aligned_cols=96 Identities=8% Similarity=0.167 Sum_probs=53.0
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc---cCC
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA---TGN 287 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a---~~d 287 (435)
....+..+++.+.+. .. -+|+|+.+. +. +.++.... ++.++..+.....|.+ ....++... ..+
T Consensus 26 gkpli~~~l~~l~~~----~~-~~ivvv~~~--~~----i~~~~~~~-~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~ 92 (262)
T 1vic_A 26 GKPMIQHVFEKALQS----GA-SRVIIATDN--EN----VADVAKSF-GAEVCMTSVNHNSGTE-RLAEVVEKLAIPDNE 92 (262)
T ss_dssp TEEHHHHHHHHHHHT----TC-SEEEEEESC--HH----HHHHHHHT-TCEEEECCCSSCCHHH-HHHHHHHHTTCCTTC
T ss_pred CeEHHHHHHHHHHhC----CC-ceEEEECCc--HH----HHHHHHhc-CCEEEECCccccCChH-HHHHHHHHhccCCCC
Confidence 334555666655432 12 377777642 22 23333332 3344332112233444 233334332 469
Q ss_pred EEEEEeCCCC-CCCccHHHHHHHHhcCCCceEE
Q psy3650 288 FIIIMDADLS-HHPKFIPEMIKLQQQENLDVVT 319 (435)
Q Consensus 288 ~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~ 319 (435)
+++++++|.. ++++.+..+++.+.+.+.++++
T Consensus 93 ~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~ 125 (262)
T 1vic_A 93 IIVNIQGDEPLIPPVIVRQVADNLAKFNVNMAS 125 (262)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred EEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEE
Confidence 9999999995 7889999999987655555544
No 64
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=90.38 E-value=0.21 Score=43.79 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=70.6
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCc-chHHHHHHHHHHhCCceEEEecCCCCCCHHHHH
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPD-GTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAY 277 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d-~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~ 277 (435)
..+++++|-+|+....+.++++. ......--||+||=++... ........+.. ..+.+++...+.|. -.++
T Consensus 27 ~~~FTvvi~ty~R~~~L~~lv~~----~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~--~~vpv~v~~~~~ns--LnnR 98 (293)
T 1omz_A 27 LDSFTLIMQTYNRTDLLLRLLNH----YQAVPSLHKVIVVWNNVGEKGPEELWNSLGP--HPIPVIFKPQTANK--MRNR 98 (293)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHH----HTTSTTEEEEEEEECCTTCCCTHHHHHHTCC--CSSCEEEEECSSCC--GGGG
T ss_pred CCceEEEEEeecccHHHHHHHHH----HhcCCCCCeEEEEeCCCCCCCChhhccccCC--CCccEEEEeCCCCc--hhhc
Confidence 46799999999865443333332 2332333588888777543 22222222210 12456666565442 2333
Q ss_pred HHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEe
Q psy3650 278 MHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTG 320 (435)
Q Consensus 278 n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~ 320 (435)
-.-....++|.|+.+|+|..++.+.|+-....+++.+.-+|+-
T Consensus 99 F~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVGf 141 (293)
T 1omz_A 99 LQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGF 141 (293)
T ss_dssp GSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEES
T ss_pred cCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceecC
Confidence 3333445789999999999999999999999998777666654
No 65
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=89.91 E-value=1.3 Score=37.01 Aligned_cols=79 Identities=15% Similarity=0.254 Sum_probs=54.4
Q ss_pred EEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCC-CCCCCcHHHHHHHHhc
Q psy3650 9 EIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADL-SHHPKFIPEMIKLQQQ 87 (435)
Q Consensus 9 EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~-~~~~~~l~~~~~~~~~ 87 (435)
+|+||-+. .+.++.+.+.. ...++. ......|...++..|++.+ .+++ ++.+|. .++++.+..+++.+.+
T Consensus 40 ~vvvv~~~-----~~~~~~~~~~~-~~~~v~-d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 40 QTVFVCRD-----EKQAEKLSSRY-EAEFIW-DLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp EEEEECSS-----HHHHHHHHTTS-CSCEEC-CTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEECC-----HHHHHHHHHhc-CCeEEe-cCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhhc
Confidence 88888531 23344444322 233432 2233457889999999999 9999 999999 5688999999998865
Q ss_pred CCCcEEEEe
Q psy3650 88 ENLDVVTGT 96 (435)
Q Consensus 88 ~~~~~v~g~ 96 (435)
.+.++++..
T Consensus 111 ~~~~~v~~~ 119 (208)
T 3ngw_A 111 AGCDALIPK 119 (208)
T ss_dssp HTCSEEEEE
T ss_pred CCCCEEEEc
Confidence 566777654
No 66
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=89.52 E-value=1.1 Score=37.85 Aligned_cols=55 Identities=13% Similarity=0.063 Sum_probs=39.7
Q ss_pred ceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCC-CCCCCcHHHHHHHHhcCCC
Q psy3650 35 EKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADL-SHHPKFIPEMIKLQQQENL 90 (435)
Q Consensus 35 ~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~ 90 (435)
..+.+.+.....|.+++. .|++....|+++++++|. .+++..+..+++...+.+.
T Consensus 61 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 61 CEVFLTPSDLPSGSDRVL-YVVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp SEEEECCTTCCSHHHHHH-HHHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred eEEEECCcccccchHHHH-HHHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 355543333345666666 477776779999999999 7788999999998866553
No 67
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=89.17 E-value=3.8 Score=34.32 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHhhcc--CCEEEEEeCCC-CCCCccHHHHHHHHhcCC
Q psy3650 271 LGLGTAYMHGLKYAT--GNFIIIMDADL-SHHPKFIPEMIKLQQQEN 314 (435)
Q Consensus 271 ~g~~~a~n~g~~~a~--~d~v~~~d~D~-~~~~~~l~~~~~~~~~~~ 314 (435)
.|...++..|++... .++++++|+|. .++++.+..+++.+.+.+
T Consensus 81 ~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~ 127 (228)
T 2yc3_A 81 KERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVG 127 (228)
T ss_dssp SSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhcC
Confidence 577888899998765 48999999997 578889999999876544
No 68
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=88.59 E-value=1.6 Score=37.77 Aligned_cols=79 Identities=13% Similarity=0.231 Sum_probs=48.9
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhc---cCCEEEEEcCCC-CCCCCcHHHHHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA---TGNFIIIMDADL-SHHPKFIPEMIK 83 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a---~gd~i~~lD~D~-~~~~~~l~~~~~ 83 (435)
-+|+|+-| . +.++++.+.+ ...+.+...+...|.+. ...|++.. ..|+++++++|. .++++.+..+++
T Consensus 50 ~~VvVvt~--~----~~i~~~~~~~-g~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~ 121 (256)
T 3tqd_A 50 EEVVIATD--D----KRIRQVAEDF-GAVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAE 121 (256)
T ss_dssp SEEEEEES--C----HHHHHHHHHT-TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHH
T ss_pred CEEEEECC--H----HHHHHHHHHc-CCeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHH
Confidence 47777743 1 2333433333 34555543334446554 56677665 469999999999 678899999999
Q ss_pred HHhcC-CCcEEE
Q psy3650 84 LQQQE-NLDVVT 94 (435)
Q Consensus 84 ~~~~~-~~~~v~ 94 (435)
.+.+. +++++.
T Consensus 122 ~~~~~~~~~~a~ 133 (256)
T 3tqd_A 122 DLDEHDNVKVAS 133 (256)
T ss_dssp HHHHCC--CEEE
T ss_pred HHHhCCCCCEEE
Confidence 98653 445543
No 69
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=88.54 E-value=9.9 Score=35.72 Aligned_cols=49 Identities=14% Similarity=0.075 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHhhcc---CCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEe
Q psy3650 271 LGLGTAYMHGLKYAT---GNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTG 320 (435)
Q Consensus 271 ~g~~~a~n~g~~~a~---~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~ 320 (435)
.|.+.++..++.... .+.++++.+|...+ ..+.++++...+.+.++..+
T Consensus 118 ~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~~~tl~ 169 (451)
T 1yp2_A 118 QGTADAVRQYLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRETDADITVA 169 (451)
T ss_dssp CSHHHHHHHTHHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHHTTCSEEEE
T ss_pred cCcHHHHHHHHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHHcCCcEEEE
Confidence 688899998888764 58999999999654 56899998876666666554
No 70
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=87.74 E-value=3 Score=35.44 Aligned_cols=81 Identities=15% Similarity=0.215 Sum_probs=49.9
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCC-CCCCcHHHHHHHHh
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPEMIKLQQ 86 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~-~~~~~l~~~~~~~~ 86 (435)
-+|+||-+. +.+.++..+. ...++.-+.+...|.+++. .|+.....++++++++|.. ++++.+..+++...
T Consensus 44 ~~ivvv~~~------~~i~~~~~~~-~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~ 115 (245)
T 1h7e_A 44 AEVWVATDD------PRVEQAVQAF-GGKAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQGMR 115 (245)
T ss_dssp CEEEEEESC------HHHHHHHHHT-TCEEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHHHH
T ss_pred CeEEEECCc------HHHHHHHHHc-CCeEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHH
Confidence 477777542 2333433333 2344432222334555544 5566556799999999994 58889999999886
Q ss_pred cC-CCcEEEEe
Q psy3650 87 QE-NLDVVTGT 96 (435)
Q Consensus 87 ~~-~~~~v~g~ 96 (435)
+. ++++++..
T Consensus 116 ~~~~~~~~~~~ 126 (245)
T 1h7e_A 116 DDPALPVATLC 126 (245)
T ss_dssp HCTTCCEEEEE
T ss_pred hCCCCCEEEEe
Confidence 66 67765433
No 71
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=87.55 E-value=1.3 Score=39.12 Aligned_cols=55 Identities=15% Similarity=0.176 Sum_probs=43.3
Q ss_pred eEEEecCCCCCCHHHHHHHHHhhccCCEEEEEeCCCCCC--CccHHHHHHHHhcCCC
Q psy3650 261 KIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHH--PKFIPEMIKLQQQENL 315 (435)
Q Consensus 261 ~i~~~~~~~n~g~~~a~n~g~~~a~~d~v~~~d~D~~~~--~~~l~~~~~~~~~~~~ 315 (435)
.+.++..+...|.+.++..++.....+.++++.+|..+. +..+..+++...+.+.
T Consensus 107 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~ 163 (297)
T 2ux8_A 107 NIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG 163 (297)
T ss_dssp SEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS
T ss_pred ceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC
Confidence 455555566779999999998887678899999999877 6889999988765444
No 72
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=87.51 E-value=3.3 Score=36.60 Aligned_cols=60 Identities=15% Similarity=0.097 Sum_probs=44.6
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhhccCCEEEEEeCCCCCC----Cc---cHHHHHHHHhcCCCceEEe
Q psy3650 260 EKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHH----PK---FIPEMIKLQQQENLDVVTG 320 (435)
Q Consensus 260 ~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v~~~d~D~~~~----~~---~l~~~~~~~~~~~~~~v~~ 320 (435)
..+.++..+...|.+.++..++.....+.++++.+|..+. +. .+.++++...+.+. .+++
T Consensus 102 ~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~i~ 168 (302)
T 2e3d_A 102 VTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH-SQIM 168 (302)
T ss_dssp CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-EEEE
T ss_pred cceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-cEEE
Confidence 3555555566789999999999887668899999999876 45 79999987765444 3444
No 73
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=87.38 E-value=2.9 Score=37.16 Aligned_cols=106 Identities=11% Similarity=0.045 Sum_probs=62.2
Q ss_pred EeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHH-hCCc-eEEEecCCCCCCHHHHHHHHHhh
Q psy3650 206 LPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSI-YGSE-KIVLKPRKKKLGLGTAYMHGLKY 283 (435)
Q Consensus 206 ip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-~~~~-~i~~~~~~~n~g~~~a~n~g~~~ 283 (435)
+|..+....+..+++.+.+. .-+|+|+-+.. ..+.+.+.... . +. ++.++..+...|.+.++..++..
T Consensus 31 l~i~gg~pli~~~l~~l~~~------~~~i~vv~~~~---~~~~i~~~~~~~~-~~~~~~~i~~~~~~gt~~al~~a~~~ 100 (308)
T 2qh5_A 31 LKLFDHKSLFELSFKRNASL------VDETLIVCNEK---HYFLALEEIKNEI-KNKSVGFLLESLSKNTANAIALSALM 100 (308)
T ss_dssp CTTBTTBCHHHHHHHHHHTT------CSEEEEEEEGG---GHHHHHHHTTTTC-SSCEEEEEEESSCCCHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHcc------CCCEEEEEChh---HHHHHHHHHHHhh-CCCccEEEeCCCCCChHHHHHHHHHH
Confidence 34434555666666665442 12666664331 12233333222 2 22 34344455567899998888887
Q ss_pred cc-CCEEEEEeCCCCC-CCccHHHHHHH---HhcCCCceEEee
Q psy3650 284 AT-GNFIIIMDADLSH-HPKFIPEMIKL---QQQENLDVVTGT 321 (435)
Q Consensus 284 a~-~d~v~~~d~D~~~-~~~~l~~~~~~---~~~~~~~~v~~~ 321 (435)
.. .++++++.+|..+ +++.+.++++. ..+.+.+++.+.
T Consensus 101 l~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 143 (308)
T 2qh5_A 101 SDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGV 143 (308)
T ss_dssp SCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hCCCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 65 4689999999986 67778888876 434455555543
No 74
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=87.19 E-value=2 Score=37.33 Aligned_cols=62 Identities=8% Similarity=0.034 Sum_probs=47.5
Q ss_pred ceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEEEEee
Q psy3650 35 EKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTR 97 (435)
Q Consensus 35 ~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~g~~ 97 (435)
..+.+.......|.+.++..|+.....+.++++.+|..+. ..+..+++...+.+.++++...
T Consensus 97 ~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~~~~~~~~ 158 (269)
T 4ecm_A 97 VSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVEEFTNQKEGAKVLLQ 158 (269)
T ss_dssp CEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHHHHHTSSSSEEEEEE
T ss_pred ceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHHHHHhcCCCeEEEEE
Confidence 3555555566779999999998887789999999999665 7788888888766777665543
No 75
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=87.17 E-value=10 Score=32.19 Aligned_cols=96 Identities=16% Similarity=0.153 Sum_probs=56.7
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHh-CCceEEEecCCCCCCHHHHHHHHHhhcc----
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIY-GSEKIVLKPRKKKLGLGTAYMHGLKYAT---- 285 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~i~~~~~~~n~g~~~a~n~g~~~a~---- 285 (435)
....+..+++.+.+ ....-+|+||-+... .+.+++....+ ....+.++.. ..+...++..|++...
T Consensus 31 Gkpll~~~l~~~~~----~~~~~~ivvv~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~sv~~al~~l~~~~~ 101 (246)
T 3f1c_A 31 GKPIIVHTVEKFIL----NTRFDKILISSPKEW---MNHAEDNIKKYISDDRIVVIEG--GEDRNETIMNGIRFVEKTYG 101 (246)
T ss_dssp TEEHHHHHHHHHHT----CTTCSEEEEEECGGG---HHHHHHHHHHHCCCTTEEEEEC--CSSHHHHHHHHHHHHHHHTC
T ss_pred CeeHHHHHHHHHHc----CCCCCEEEEEeCHHH---HHHHHHHHHHhCCCCCEEEECC--CCchHHHHHHHHHHHhhhhc
Confidence 34555666655533 111237777754322 22223332222 1223444433 2356777888887653
Q ss_pred ---CCEEEEEeCCC-CCCCccHHHHHHHHhcCCC
Q psy3650 286 ---GNFIIIMDADL-SHHPKFIPEMIKLQQQENL 315 (435)
Q Consensus 286 ---~d~v~~~d~D~-~~~~~~l~~~~~~~~~~~~ 315 (435)
.++++++|+|. .++++.+.++++.+.+.+.
T Consensus 102 ~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a 135 (246)
T 3f1c_A 102 LTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA 135 (246)
T ss_dssp CCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSE
T ss_pred CCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 59999999998 5899999999999876543
No 76
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=87.02 E-value=0.91 Score=39.11 Aligned_cols=70 Identities=10% Similarity=0.015 Sum_probs=45.5
Q ss_pred CeEEEEEeCCC--CcChHHHHHHHHHHhCCceEEEccC--CCCC------------CHHHHHHHHHhhcc----------
Q psy3650 7 PYEIIVIDDGS--PDGTLDAAKQLQSIYGSEKIVLKPR--KKKL------------GLGTAYMHGLKYAT---------- 60 (435)
Q Consensus 7 ~~EiivvDd~S--~d~t~~i~~~~~~~~~~~~i~~~~~--~~n~------------g~~~a~n~gl~~a~---------- 60 (435)
+.-+|||+|+. ++.+.+++++.. +...++.. ..+. -....+|.||++.+
T Consensus 51 ~L~WIVVEd~~~~t~~va~lL~rsG-----l~y~HL~~~~p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~ 125 (281)
T 3cu0_A 51 RLHWLLVEDAEGPTPLVSGLLAASG-----LLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEK 125 (281)
T ss_dssp SEEEEEEESSSSCCHHHHHHHHHHC-----SEEEEEECCCC-----------CCCCCSHHHHHHHHHHHTTCCCEEEECC
T ss_pred ceEEEEEcCCCCCCHHHHHHHHHcC-----CceEEeccCCCccccccccccccccchhHHHHHHHHHHHHhhccccchhc
Confidence 68899999974 455666666542 33333322 2221 11466999998776
Q ss_pred -------CCEEEEEcCCCCCCCCcHHHH
Q psy3650 61 -------GNFIIIMDADLSHHPKFIPEM 81 (435)
Q Consensus 61 -------gd~i~~lD~D~~~~~~~l~~~ 81 (435)
.-+|.|.|+|..++-+.+++|
T Consensus 126 ~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 126 DPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp SCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred cccccCCceeEEEecCCCcccHHHHHHh
Confidence 257899999999888777763
No 77
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=86.87 E-value=2.9 Score=35.28 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHhhc-cCCEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEEEe
Q psy3650 46 LGLGTAYMHGLKYA-TGNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVTGT 96 (435)
Q Consensus 46 ~g~~~a~n~gl~~a-~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~g~ 96 (435)
.+...++..|+... ..|+++++++|. .++++.+..+++...+.+++.++..
T Consensus 79 ~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 79 STSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp CCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred CcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 34456777888877 579999999999 4688999999998877777765544
No 78
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=86.82 E-value=2.6 Score=35.66 Aligned_cols=44 Identities=18% Similarity=0.311 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHhhcc-CCEEEEEeCCCC-CCCccHHHHHHHHhcCC
Q psy3650 271 LGLGTAYMHGLKYAT-GNFIIIMDADLS-HHPKFIPEMIKLQQQEN 314 (435)
Q Consensus 271 ~g~~~a~n~g~~~a~-~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~ 314 (435)
.|...++..|++... .++++++++|.. ++++.+..+++.+.+.+
T Consensus 83 ~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 83 DERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp SSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred CCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 578888999998874 699999999985 78889999998775544
No 79
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=85.48 E-value=0.94 Score=38.57 Aligned_cols=72 Identities=11% Similarity=0.049 Sum_probs=47.6
Q ss_pred CCeEEEEEeCCC--CcChHHHHHHHHHHhCCceEEEccCC--CC------------CCHHHHHHHHHhhcc---------
Q psy3650 6 YPYEIIVIDDGS--PDGTLDAAKQLQSIYGSEKIVLKPRK--KK------------LGLGTAYMHGLKYAT--------- 60 (435)
Q Consensus 6 ~~~EiivvDd~S--~d~t~~i~~~~~~~~~~~~i~~~~~~--~n------------~g~~~a~n~gl~~a~--------- 60 (435)
.+.-.|||+|+. ++.+.+++++.. +...++... .+ .-....+|.||++.+
T Consensus 32 p~L~WIVVEd~~~~t~~va~lL~~sg-----l~y~HL~~~~p~~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~ 106 (253)
T 1v84_A 32 PNLHWLVVEDAPRRTPLTARLLRDTG-----LNYTHLHVETPRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQ 106 (253)
T ss_dssp SSEEEEEEESSSSCCHHHHHHHHHHC-----CEEEEEECCCCHHHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCC
T ss_pred CceEEEEEeCCCCCCHHHHHHHHHcC-----CceEEeecCCCccccccccccCccccchHHHHHHHHHHHHHhccccccc
Confidence 368899999965 456667776653 333333222 11 012467999998765
Q ss_pred CCEEEEEcCCCCCCCCcHHHHH
Q psy3650 61 GNFIIIMDADLSHHPKFIPEMI 82 (435)
Q Consensus 61 gd~i~~lD~D~~~~~~~l~~~~ 82 (435)
..+|.|.|+|..++-+.+++|-
T Consensus 107 ~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 107 PGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp CEEEEECCTTSEECHHHHHHHH
T ss_pred ceeEEEecCCCcccHHHHHHHh
Confidence 3688999999998887777744
No 80
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=84.74 E-value=0.87 Score=37.37 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=49.9
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhc--cCCEEEEEcCCCC-CCCCcHHHHHHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA--TGNFIIIMDADLS-HHPKFIPEMIKL 84 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a--~gd~i~~lD~D~~-~~~~~l~~~~~~ 84 (435)
-+|+||-+... +.++++.... ...++.. .....|.+.+...|++.. ..++++++++|.. ++++.+..+++.
T Consensus 47 ~~i~vv~~~~~----~~~~~~~~~~-~~~~~~~-~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 47 DQLIVTLGGAA----DEVLEKVELD-GLDIVLV-DDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp SEEEEEECTTH----HHHHHHSCCT-TSEEEEC-CCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CcEEEEeCCCH----HHHHHHhccC-CCEEEEC-CCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 46777754321 2233332222 2344432 233457778888999887 5699999999995 588899999987
Q ss_pred HhcCCCcEEE
Q psy3650 85 QQQENLDVVT 94 (435)
Q Consensus 85 ~~~~~~~~v~ 94 (435)
+.++++++
T Consensus 121 --~~~~~~~~ 128 (199)
T 2waw_A 121 --GRGATIAV 128 (199)
T ss_dssp --HTTCSEEE
T ss_pred --cCCCCEEE
Confidence 34556554
No 81
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=84.70 E-value=2.9 Score=37.14 Aligned_cols=106 Identities=10% Similarity=-0.012 Sum_probs=62.5
Q ss_pred Eecc-CCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCC-cchHHHHHHHHHHhC-CceEEEecCC--------------
Q psy3650 206 LPTY-NEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSP-DGTLDAAKQLQSIYG-SEKIVLKPRK-------------- 268 (435)
Q Consensus 206 ip~~-n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~-d~t~~~~~~~~~~~~-~~~i~~~~~~-------------- 268 (435)
+|.- +....+..+++.+.+. . .-+|+||-.... +...+. +....+ ...+..+..+
T Consensus 26 ~~ig~~g~pli~~~l~~~~~~----~-~~~i~vv~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 97 (303)
T 3pnn_A 26 DGIGPGGDTIMDYSVYDAIRA----G-FGRLVFVIRHSFEKEFREK---ILTKYEGRIPVELVFQELDRLPEGFSCPEGR 97 (303)
T ss_dssp CCCSTTSCCHHHHHHHHHHHH----T-CCEEEEEECGGGHHHHHHH---THHHHTTTSCEEEEECCTTCCCTTCCCCTTC
T ss_pred eEcCCCCeeHHHHHHHHHHHC----C-CCeEEEEcCchHHHHHHHH---HHHHhccCCcEEEEecccccccccccccccc
Confidence 4543 3446667777666442 1 237777765321 222222 222221 2344444333
Q ss_pred -CCCCHHHHHHHHHhhccCCEEEEEeCCCCCCCccHHHHHHHHhc---CCCceEEe
Q psy3650 269 -KKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQ---ENLDVVTG 320 (435)
Q Consensus 269 -~n~g~~~a~n~g~~~a~~d~v~~~d~D~~~~~~~l~~~~~~~~~---~~~~~v~~ 320 (435)
+..|.+.|+..+......+ ++++++|..++++.+..+++...+ .+.++.+.
T Consensus 98 ~~~~Gt~~al~~a~~~i~~~-~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~ 152 (303)
T 3pnn_A 98 EKPWGTNHAVLMGRDAIREP-FAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMV 152 (303)
T ss_dssp CSCCCHHHHHHTTTTTCCSC-EEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEE
T ss_pred cccCCcHHHHHHHHHhcCCC-EEEEECCeecCHHHHHHHHHHHHHhccccCceEEE
Confidence 4678999999988887544 566789999888889999998764 34454443
No 82
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=84.39 E-value=1.6 Score=37.06 Aligned_cols=71 Identities=11% Similarity=0.113 Sum_probs=45.1
Q ss_pred CeEEEEEeCCCCcC--hHHHHHHHHHHhCCceEEEccCC--CCC------CHHHHHHHHHhhcc---------CCEEEEE
Q psy3650 7 PYEIIVIDDGSPDG--TLDAAKQLQSIYGSEKIVLKPRK--KKL------GLGTAYMHGLKYAT---------GNFIIIM 67 (435)
Q Consensus 7 ~~EiivvDd~S~d~--t~~i~~~~~~~~~~~~i~~~~~~--~n~------g~~~a~n~gl~~a~---------gd~i~~l 67 (435)
+.-+|||+|+..-. +.+++++. .+...++... .++ .....+|.||++.+ ..+|.|.
T Consensus 33 ~l~WIVVEd~~~~~~~v~~lL~~s-----gl~y~HL~~~~~~~~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFA 107 (246)
T 2d0j_A 33 QLHWILVEDAAARSELVSRFLARA-----GLPSTHLHVPTPRRYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFA 107 (246)
T ss_dssp TEEEEEEESSSSCCHHHHHHHHHS-----CSCEEEEECCCCCC----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEEC
T ss_pred ceEEEEEcCCCCCCHHHHHHHHHc-----CCceEEEecCCccccCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEc
Confidence 47899999977432 34555543 3334333222 221 12377999997754 3689999
Q ss_pred cCCCCCCCCcHHHHH
Q psy3650 68 DADLSHHPKFIPEMI 82 (435)
Q Consensus 68 D~D~~~~~~~l~~~~ 82 (435)
|+|..++-+.+++|-
T Consensus 108 DDdNtY~l~LF~emR 122 (246)
T 2d0j_A 108 DDDNTYSLELFQEMR 122 (246)
T ss_dssp CTTCEECTHHHHHHT
T ss_pred cCCCcccHHHHHHHh
Confidence 999999988777744
No 83
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=84.17 E-value=7.8 Score=32.41 Aligned_cols=75 Identities=11% Similarity=0.017 Sum_probs=48.4
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhc-------cCCEEEEEcCCC-CCCCCcHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA-------TGNFIIIMDADL-SHHPKFIP 79 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a-------~gd~i~~lD~D~-~~~~~~l~ 79 (435)
-+|+||-+...+...+ +.+ .....+.++ .+..|.+.+...|+... ..++++++++|. .++++.+.
T Consensus 51 ~~ivvv~~~~~~~~~~-~~~----~~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~ 123 (231)
T 1vgw_A 51 DLTVVVVSPEDTFADK-VQT----AFPQVRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALA 123 (231)
T ss_dssp CEEEEECCTTCSTHHH-HHH----HCTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHH
T ss_pred CeEEEEECccHHHHHH-HHh----cCCCceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHH
Confidence 4777775433332222 222 211234443 34567888888888776 469999999998 56888999
Q ss_pred HHHHHHhcCC
Q psy3650 80 EMIKLQQQEN 89 (435)
Q Consensus 80 ~~~~~~~~~~ 89 (435)
.+++...+.+
T Consensus 124 ~l~~~~~~~~ 133 (231)
T 1vgw_A 124 RLIEQAGNAA 133 (231)
T ss_dssp HHHHHHTTCT
T ss_pred HHHHHHhhcC
Confidence 9999885544
No 84
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=84.00 E-value=3.3 Score=36.55 Aligned_cols=104 Identities=15% Similarity=0.126 Sum_probs=61.6
Q ss_pred EeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHh--CCceEEEecCCCCCCHHHHHHHHHhh
Q psy3650 206 LPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIY--GSEKIVLKPRKKKLGLGTAYMHGLKY 283 (435)
Q Consensus 206 ip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~--~~~~i~~~~~~~n~g~~~a~n~g~~~ 283 (435)
+|.++ ...+...++.+... . --+|+||..+... +.++++.... -++.+.+...+...|.+.++..|++.
T Consensus 28 lpi~g-kpli~~~l~~l~~~----g-i~~I~vv~~~~~~---~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~ 98 (293)
T 1fxo_A 28 LPVYD-KPMIYYPLSTLMLA----G-IREILIISTPQDT---PRFQQLLGDGSNWGLDLQYAVQPSPDGLAQAFLIGESF 98 (293)
T ss_dssp SEETT-EETTHHHHHHHHHT----T-CCEEEEEECTTTH---HHHHHHHTTSGGGTCEEEEEECSSCCCGGGHHHHTHHH
T ss_pred CeECC-EeHHHHHHHHHHHC----C-CCEEEEEeccccH---HHHHHHHhcccccCceEEEeeCCCCCCHHHHHHHHHHH
Confidence 44454 35677777766542 1 2377777543221 2233332221 12355555555667888898888887
Q ss_pred ccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceE
Q psy3650 284 ATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVV 318 (435)
Q Consensus 284 a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v 318 (435)
...+-++++.+|..+....+.++++...+.+.+.+
T Consensus 99 i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~ 133 (293)
T 1fxo_A 99 IGNDLSALVLGDNLYYGHDFHELLGSASQRQTGAS 133 (293)
T ss_dssp HTTSEEEEEETTEEEECTTHHHHHHHHHTCCSSEE
T ss_pred hCCCCEEEEECChhccCccHHHHHHHHHhcCCCcE
Confidence 76666666669987544678999988754444443
No 85
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=83.76 E-value=6.3 Score=33.10 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHhhc----c---CCEEEEEeCCC-CCCCccHHHHHHHHhcCC
Q psy3650 271 LGLGTAYMHGLKYA----T---GNFIIIMDADL-SHHPKFIPEMIKLQQQEN 314 (435)
Q Consensus 271 ~g~~~a~n~g~~~a----~---~d~v~~~d~D~-~~~~~~l~~~~~~~~~~~ 314 (435)
.|...++..|+... . .++++++++|. .++++.+..+++.+.+.+
T Consensus 84 ~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2vsh_A 84 ADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHD 135 (236)
T ss_dssp SSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSS
T ss_pred CchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 46778888888876 2 48999999999 588899999999886544
No 86
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=83.36 E-value=1.8 Score=37.87 Aligned_cols=56 Identities=20% Similarity=0.154 Sum_probs=44.9
Q ss_pred ceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCC----cHHHHHHHHhcCCC
Q psy3650 35 EKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPK----FIPEMIKLQQQENL 90 (435)
Q Consensus 35 ~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~----~l~~~~~~~~~~~~ 90 (435)
..+.+.......|.++++..|+.....+.++++.+|..++++ .+..+++...+.++
T Consensus 95 ~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~ 154 (281)
T 3juk_A 95 CCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC 154 (281)
T ss_dssp CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred ccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence 356555556678999999999988877889999999988888 79999998766555
No 87
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=83.27 E-value=3.3 Score=39.07 Aligned_cols=89 Identities=11% Similarity=0.127 Sum_probs=55.7
Q ss_pred CCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhcc-CCEEE
Q psy3650 212 KENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYAT-GNFII 290 (435)
Q Consensus 212 ~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~-~d~v~ 290 (435)
...+..+++.+.+. . .-+|+++-+.. .+.++++.... . +.++..+...|.+.++..+++... .++++
T Consensus 33 kpli~~~l~~l~~~----~-~~~iivv~~~~----~~~i~~~~~~~-~--~~~v~~~~~~g~~~~~~~~~~~~~~~~~vl 100 (456)
T 2v0h_A 33 KPMVKHVIDTAHQL----G-SENIHLIYGHG----GDLMRTHLANE-Q--VNWVLQTEQLGTAHAVQQAAPFFKDNENIV 100 (456)
T ss_dssp EEHHHHHHHHHHHT----T-CSCEEEEECTT----HHHHHHHTTTC-C--CEEEECSCCCCHHHHHHHHGGGCCTTSEEE
T ss_pred ccHHHHHHHHHHhC----C-CCcEEEEeCCC----HHHHHHHhhcC-C--cEEEeCCCCCCcHHHHHHHHHhcCCCCeEE
Confidence 34555556555442 1 12666665432 12233332221 2 333334556788899999998875 69999
Q ss_pred EEeCCCC-CCCccHHHHHHHHhc
Q psy3650 291 IMDADLS-HHPKFIPEMIKLQQQ 312 (435)
Q Consensus 291 ~~d~D~~-~~~~~l~~~~~~~~~ 312 (435)
++++|.. +++..+.++++...+
T Consensus 101 v~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 101 VLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp EEETTCTTCCHHHHHHHHHHCCT
T ss_pred EEcCCcceeCHHHHHHHHHHHhc
Confidence 9999995 788899999988754
No 88
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=83.04 E-value=9.4 Score=31.66 Aligned_cols=88 Identities=15% Similarity=0.133 Sum_probs=54.9
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc-cCCEE
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA-TGNFI 289 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a-~~d~v 289 (435)
....+..+++.+.+. .. .-+|+|+-+... .+.++++.. .. .+.++.. ..+.+.++..|++.. ..+++
T Consensus 29 g~pli~~~l~~l~~~---~~-~~~i~vv~~~~~---~~~~~~~~~-~~--~v~~~~~--~~~~~~~i~~al~~~~~~~~v 96 (223)
T 2xwl_A 29 GTPLLEHALSGLRAS---GV-IDRIVIAVPPAL---TDESKLVFG-GE--DSVIVSG--GVDRTESVALALEAAGDAEFV 96 (223)
T ss_dssp TEEHHHHHHHHHHHH---SC-CSEEEEEECGGG---HHHHHHHTC-BT--TEEEEEC--CSSHHHHHHHHHTTCTTCSEE
T ss_pred CeEHHHHHHHHHhcC---CC-CCeEEEEEcccH---HHHHHHHhc-cC--CeEEEcC--CCCHHHHHHHHHHhcCCCCEE
Confidence 445566667666542 10 127777754321 222333221 12 3444433 245688889999887 67999
Q ss_pred EEEeCCCC-CCCccHHHHHHHH
Q psy3650 290 IIMDADLS-HHPKFIPEMIKLQ 310 (435)
Q Consensus 290 ~~~d~D~~-~~~~~l~~~~~~~ 310 (435)
+++++|.. ++++.+..+++.+
T Consensus 97 lv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 97 LVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp EECCTTCTTCCHHHHHHHHHHH
T ss_pred EEEcCCcccCCHHHHHHHHHHH
Confidence 99999994 7888999999987
No 89
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=82.64 E-value=5.2 Score=34.38 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=48.7
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhcc---CCEEEEEcCCC-CCCCCcHHHHHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYAT---GNFIIIMDADL-SHHPKFIPEMIK 83 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~---gd~i~~lD~D~-~~~~~~l~~~~~ 83 (435)
-+|+|+-|. +.+.+..+.+ ...+.+.......|. .+...|++... .|+++++++|. .++|+.+..+++
T Consensus 43 ~~vvVvt~~------~~i~~~~~~~-g~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~ 114 (253)
T 4fcu_A 43 DDLCVATDD------ERIAEICRAE-GVDVVLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAK 114 (253)
T ss_dssp CEEEEEESC------HHHHHHHHTT-TCCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHH
T ss_pred CEEEEECCH------HHHHHHHHHc-CCeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHH
Confidence 577777542 2334444333 234554332333343 45666776653 58999999999 678899999999
Q ss_pred HHhcC-CCcEE
Q psy3650 84 LQQQE-NLDVV 93 (435)
Q Consensus 84 ~~~~~-~~~~v 93 (435)
.+.+. +.+++
T Consensus 115 ~~~~~~~~~~a 125 (253)
T 4fcu_A 115 LLVDKPNCSMS 125 (253)
T ss_dssp HHHHCTTCSEE
T ss_pred HHHhCCCCCEE
Confidence 98765 34443
No 90
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=82.14 E-value=3.9 Score=33.63 Aligned_cols=48 Identities=13% Similarity=0.182 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHhhccCCEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEEE
Q psy3650 46 LGLGTAYMHGLKYATGNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVTG 95 (435)
Q Consensus 46 ~g~~~a~n~gl~~a~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~g 95 (435)
.|...+...|++....++++++++|. .++++.+..+++. +.+.++++.
T Consensus 77 ~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~--~~~~~~~~~ 125 (201)
T 1e5k_A 77 PGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ--RKDAPVVWV 125 (201)
T ss_dssp CSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT--CTTCSEEEE
T ss_pred CCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh--cCCCCEEEE
Confidence 68899999999998889999999999 6789999999986 455666554
No 91
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=82.00 E-value=1.2 Score=36.45 Aligned_cols=48 Identities=15% Similarity=0.225 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHHhhc--cCCEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEE
Q psy3650 45 KLGLGTAYMHGLKYA--TGNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVT 94 (435)
Q Consensus 45 n~g~~~a~n~gl~~a--~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~ 94 (435)
..|.+.+...|++.. ..++++++++|. .++++.+..+++. +.+.++++
T Consensus 78 ~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~ 128 (197)
T 2wee_A 78 ERGCAASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMV 128 (197)
T ss_dssp --CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEE
T ss_pred ccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEE
Confidence 457888999999887 468999999999 5688899999987 34445543
No 92
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=81.71 E-value=12 Score=30.54 Aligned_cols=96 Identities=9% Similarity=0.081 Sum_probs=58.7
Q ss_pred CcceEEEEeccCCCCChH--HH---------HHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecC
Q psy3650 199 KNKYTVLLPTYNEKENLP--II---------VYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPR 267 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~--~~---------l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~ 267 (435)
++++.+||++-.....+. +. ++...+.+... .-+|+|+-+.... +.+. ++.++.- .
T Consensus 12 ~~~~~~iILA~G~g~Rmg~~K~ll~i~g~pll~~~l~~l~~~--~~~i~vv~~~~~~------~~~~----~~~~v~~-~ 78 (201)
T 2e8b_A 12 SKVNTCYVLAGGKSKRFGEDKLLYEIKGKKVIERVYETAKSV--FKEVYIVAKDREK------FSFL----NAPVVLD-E 78 (201)
T ss_dssp CSCCEEEEEEESSCCCCSTTHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEESCSGG------GGGG----TCCEEEC-C
T ss_pred ccCceEEEECCCCCccCCCCcccceECceEHHHHHHHHHHHh--CCEEEEEeCcHHH------hhcC----CceEEec-C
Confidence 345777888877666552 22 22222223322 2377777543322 1111 2344332 2
Q ss_pred CCCCCHHHHHHHHHhhccCCEEEEEeCCCC-CCCccHHH-HH
Q psy3650 268 KKKLGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPE-MI 307 (435)
Q Consensus 268 ~~n~g~~~a~n~g~~~a~~d~v~~~d~D~~-~~~~~l~~-~~ 307 (435)
....|.+.++..|++....+.++++++|.. ++++.+.. ++
T Consensus 79 ~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 79 FEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 235689999999999888899999999996 68888888 76
No 93
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=81.65 E-value=5.2 Score=33.71 Aligned_cols=88 Identities=8% Similarity=0.121 Sum_probs=58.3
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhccCCEE
Q psy3650 210 NEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFI 289 (435)
Q Consensus 210 n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v 289 (435)
+....+..+++.+.+. . . +|+|+-+. +.. +++. .+.+ +...|.+.++..|++... +.+
T Consensus 30 ~g~pll~~~l~~l~~~----~-~-~ivvv~~~--~~i----~~~~------~~~~---~~~~g~~~~i~~a~~~~~-~~~ 87 (232)
T 2dpw_A 30 RGRPMVEWVLEALYAA----G-L-SPVYVGEN--PGL----VPAP------ALTL---PDRGGLLENLEQALEHVE-GRV 87 (232)
T ss_dssp TTEETHHHHHHHHHHT----T-C-EEEEESCC--SSC----SSCC------SEEE---CCCSSHHHHHHHHHHTCC-SEE
T ss_pred CCEEHHHHHHHHHHhc----C-C-EEEEEeCh--HHH----hhhc------CeEe---cCCCCHHHHHHHHHHHcC-CCE
Confidence 3456777777776542 1 2 88887332 221 1110 2333 345688999999998877 999
Q ss_pred EEEeCCCC-CCCccHHHHHHHHhcCCCceEEee
Q psy3650 290 IIMDADLS-HHPKFIPEMIKLQQQENLDVVTGT 321 (435)
Q Consensus 290 ~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~ 321 (435)
+++++|.. ++++.+..+++ . ..+.+++++.
T Consensus 88 lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~ 118 (232)
T 2dpw_A 88 LVATGDIPHLTEEAVRFVLD-K-APEAALVYPI 118 (232)
T ss_dssp EEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEE
T ss_pred EEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEE
Confidence 99999995 78889999998 4 4455666554
No 94
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=81.54 E-value=7.3 Score=37.29 Aligned_cols=89 Identities=17% Similarity=0.232 Sum_probs=57.2
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhccC---CEEEEEcCCC-CCCCCcHHHHHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATG---NFIIIMDADL-SHHPKFIPEMIK 83 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~g---d~i~~lD~D~-~~~~~~l~~~~~ 83 (435)
-||+||-.--.+.-.+.+.++..... ..+.++.+++..|.++|...++..... +.++++.+|+ .+.++.+..|++
T Consensus 56 ~~i~vv~~~~~~~i~~~~~~~~~~~~-~~i~~~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~ 134 (501)
T 3st8_A 56 QRLIVVLGHDHQRIAPLVGELADTLG-RTIDVALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIA 134 (501)
T ss_dssp SEEEEEECTTHHHHHHHHHHHHHHHT-SCCEEEECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHH
Confidence 46777754332323333333333332 345555567778999999999988754 4567777776 667788999998
Q ss_pred HHhcCCCcEEEEee
Q psy3650 84 LQQQENLDVVTGTR 97 (435)
Q Consensus 84 ~~~~~~~~~v~g~~ 97 (435)
...+.+.++.+...
T Consensus 135 ~h~~~~~~~ti~~~ 148 (501)
T 3st8_A 135 THRAVSAAVTVLTT 148 (501)
T ss_dssp HHHHTTCSEEEEEE
T ss_pred HHhhccccceEeee
Confidence 87777777655443
No 95
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=80.94 E-value=6.6 Score=34.59 Aligned_cols=103 Identities=13% Similarity=0.187 Sum_probs=59.6
Q ss_pred EeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHh--CCceEEEecCCCCCCHHHHHHHHHhh
Q psy3650 206 LPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIY--GSEKIVLKPRKKKLGLGTAYMHGLKY 283 (435)
Q Consensus 206 ip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~--~~~~i~~~~~~~n~g~~~a~n~g~~~ 283 (435)
+|.++ ...+...++.+... . --+|+||..... . +.++++.... -++.+.++..+...|.+.++..|++.
T Consensus 29 lpi~g-kpli~~~l~~l~~~----g-i~~Iivv~~~~~--~-~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~ 99 (295)
T 1lvw_A 29 LPIYD-KPMIYYPLSVLMLA----G-IRDILIISTPRD--L-PLYRDLLGDGSQFGVRFSYRVQEEPRGIADAFIVGKDF 99 (295)
T ss_dssp SEETT-EETTHHHHHHHHHT----T-CCEEEEEECTTT--H-HHHHHHHTTSGGGTSEEEEEECSSCCCGGGHHHHTHHH
T ss_pred cEECC-eeHHHHHHHHHHHC----C-CCeEEEEeccch--H-HHHHHHhhhccccCceEEEeeCCCCCChHHHHHHHHHH
Confidence 45555 46677777766541 1 237777754222 1 2233333221 12345555455567888888888887
Q ss_pred ccC-CEEEEEeCCCCCCCccHHHHHHHHhcCCCceE
Q psy3650 284 ATG-NFIIIMDADLSHHPKFIPEMIKLQQQENLDVV 318 (435)
Q Consensus 284 a~~-d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v 318 (435)
... +++++. +|..+....+.++++...+.+.+.+
T Consensus 100 i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~ 134 (295)
T 1lvw_A 100 IGDSKVALVL-GDNVFYGHRFSEILRRAASLEDGAV 134 (295)
T ss_dssp HTTSCEEEEE-TTCCEECTTHHHHHHHHHTCCSSEE
T ss_pred hCCCcEEEEE-CCccccCcCHHHHHHHHHHcCCCcE
Confidence 654 555555 9987544678999987754444443
No 96
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=80.76 E-value=1.9 Score=36.29 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=38.7
Q ss_pred CCCHHHHHHHHHhhcc--CCEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEEEe
Q psy3650 45 KLGLGTAYMHGLKYAT--GNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVTGT 96 (435)
Q Consensus 45 n~g~~~a~n~gl~~a~--gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~g~ 96 (435)
..|...+...|++... .|+++++++|. .+++..+..+++...+.++++++..
T Consensus 79 ~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~ 133 (228)
T 1ezi_A 79 TASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSA 133 (228)
T ss_dssp -CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEE
T ss_pred CCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 4466777888888773 58999999998 4678899999987765555655443
No 97
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=80.15 E-value=1.4 Score=36.20 Aligned_cols=92 Identities=14% Similarity=0.172 Sum_probs=52.1
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCC-ceEEEecCCCCCCHHHHHHHHHhhccCCEE
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGS-EKIVLKPRKKKLGLGTAYMHGLKYATGNFI 289 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~-~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v 289 (435)
....+..+++.+.+ .. --+|+|+-+...+...+.+.+ .++. ..+.++.. ...|.+.++..|++.. .+.+
T Consensus 26 g~pli~~~l~~l~~----~~-~~~v~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~-~~~g~~~si~~al~~~-~~~v 95 (196)
T 3rsb_A 26 GRCLIDYVVSPLLK----SK-VNNIFIATSPNTPKTKEYINS---AYKDYKNIVVIDT-SGKGYIEDLNECIGYF-SEPF 95 (196)
T ss_dssp TEEHHHHHHHHHHS----SS-CCCEEEECCTTCHHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC-SSCE
T ss_pred CEEHHHHHHHHHHH----CC-CCEEEEEeCCChHHHHHHHHh---hccCCCCEEEEEC-CCCCcHHHHHHHHHhC-CCCE
Confidence 34555666665543 21 236777754433333333332 1211 13444432 3455666777777777 8999
Q ss_pred EEEeCCCC-CCCccHHHHHHHHhc
Q psy3650 290 IIMDADLS-HHPKFIPEMIKLQQQ 312 (435)
Q Consensus 290 ~~~d~D~~-~~~~~l~~~~~~~~~ 312 (435)
+++++|.- ++++.+.++++.+.+
T Consensus 96 lv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 96 LVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp EEEETTEESCCHHHHHHHHHHHHH
T ss_pred EEEeCCcccCCHHHHHHHHHHHHh
Confidence 99999984 799999999998875
No 98
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=79.74 E-value=3.6 Score=37.70 Aligned_cols=44 Identities=9% Similarity=0.158 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHhhccCCEEEEEeCCCC-CCCccHHHHHHHHhcC
Q psy3650 270 KLGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPEMIKLQQQE 313 (435)
Q Consensus 270 n~g~~~a~n~g~~~a~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~ 313 (435)
..|...++..|++....++++++++|.. ++++.+.++++.+.+.
T Consensus 73 g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 73 GDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp CSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred CCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 3467788999998887899999999985 7889999999887654
No 99
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=79.63 E-value=6.3 Score=34.95 Aligned_cols=62 Identities=13% Similarity=0.068 Sum_probs=43.5
Q ss_pred eEEEccCCCCCCHHHHHHHHHhhcc-CCEEEEEcCCCCC-CCCcHHHHHHH---HhcCCCcEEEEee
Q psy3650 36 KIVLKPRKKKLGLGTAYMHGLKYAT-GNFIIIMDADLSH-HPKFIPEMIKL---QQQENLDVVTGTR 97 (435)
Q Consensus 36 ~i~~~~~~~n~g~~~a~n~gl~~a~-gd~i~~lD~D~~~-~~~~l~~~~~~---~~~~~~~~v~g~~ 97 (435)
.+.++..+...|.+.++..++.... .++++++.+|..+ +++.+..+++. ..+.+.+++++..
T Consensus 78 ~~~~i~~~~~~gt~~al~~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 144 (308)
T 2qh5_A 78 SVGFLLESLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVS 144 (308)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccEEEeCCCCCChHHHHHHHHHHhCCCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEe
Confidence 3444445566799999888887765 4689999999977 67778888876 3345556665543
No 100
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=79.20 E-value=6.7 Score=33.41 Aligned_cols=81 Identities=16% Similarity=0.206 Sum_probs=50.1
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHh-CCceEEEccCCCCCCHHHHHHHHHhhcc-------CCEEEEEcCCC-CCCCCcH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIY-GSEKIVLKPRKKKLGLGTAYMHGLKYAT-------GNFIIIMDADL-SHHPKFI 78 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~-~~~~i~~~~~~~n~g~~~a~n~gl~~a~-------gd~i~~lD~D~-~~~~~~l 78 (435)
-+|+||-+.. -.+.+++..+.+ ....+.++. +..+...+...|+.... .++|+++|+|. .++++.+
T Consensus 49 ~~ivvv~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i 123 (246)
T 3f1c_A 49 DKILISSPKE---WMNHAEDNIKKYISDDRIVVIE--GGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRII 123 (246)
T ss_dssp SEEEEEECGG---GHHHHHHHHHHHCCCTTEEEEE--CCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHH
T ss_pred CEEEEEeCHH---HHHHHHHHHHHhCCCCCEEEEC--CCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHH
Confidence 5677775432 122233333332 122344433 23356777777887654 58999999998 7788999
Q ss_pred HHHHHHHhcCCCcEE
Q psy3650 79 PEMIKLQQQENLDVV 93 (435)
Q Consensus 79 ~~~~~~~~~~~~~~v 93 (435)
..+++...+.+..+.
T Consensus 124 ~~li~~~~~~~a~i~ 138 (246)
T 3f1c_A 124 EENIDAALETGAVDT 138 (246)
T ss_dssp HHHHHHHHHTSEEEE
T ss_pred HHHHHHHHhcCCEEE
Confidence 999999877654433
No 101
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=78.95 E-value=16 Score=30.72 Aligned_cols=185 Identities=11% Similarity=0.057 Sum_probs=93.8
Q ss_pred CCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhcc----C
Q psy3650 211 EKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYAT----G 286 (435)
Q Consensus 211 ~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~----~ 286 (435)
....+..+++.+.+. ...-+|+||-+... .+.++++... .+.++.. ..+...++..|++... .
T Consensus 34 Gkpll~~~l~~~~~~----~~~~~ivVv~~~~~---~~~~~~~~~~----~v~~v~g--g~~r~~sv~~gl~~~~~~~~~ 100 (231)
T 3q80_A 34 GQTLIERAVDGLLDS----GVVDTVVVAVPADR---TDEARQILGH----RAMIVAG--GSNRTDTVNLALTVLSGTAEP 100 (231)
T ss_dssp TEEHHHHHHHHHHHT----SCCCEEEEEECGGG---HHHHHHHHGG----GCEEEEC--CSSHHHHHHHHHGGGC---CC
T ss_pred CeEHHHHHHHHHHhC----CCCCeEEEECChHH---HHHHHHHhcC----CeEEEcC--CCchHHHHHHHHHHhhhcCCC
Confidence 444555666655431 11237777754322 2233333322 2333322 2245678888988775 4
Q ss_pred CEEEEEeCCCC-CCCccHHHHHHHHhcCCCceEEeeeEECCCcee--ccchhHHHHHHHHHHHHHHhcCCCcccccccee
Q psy3650 287 NFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVY--GWDFKRKLVSRGANYLTQLLLRPGVSDLTGSFR 363 (435)
Q Consensus 287 d~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (435)
++++++|+|.- ++++.+.++++.+.+ +.+.++......+.-.. ......... -...+...++. -
T Consensus 101 d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~~dt~~~~~~~g~v~~~~-----------~r~~l~~~qTP-q 167 (231)
T 3q80_A 101 EFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPLSDTIKAVDANGVVLGTP-----------ERAGLRAVQTP-Q 167 (231)
T ss_dssp SEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECCSSCEEEECTTSBEEECC-----------CGGGEEEECSC-E
T ss_pred CEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEeccCCEEEEcCCCcEEEec-----------chhheEEEcCC-c
Confidence 89999999985 899999999998865 23343332221111100 000000000 01223333333 4
Q ss_pred eecHHHHHHhhhccc----CcccchhhHHHHHHHHCCCcEEEeeeEEeecccccccCCHHHHHHHHHHHH
Q psy3650 364 LYKKQVLENLVSSCV----SKGYVFQMEMVIRARQYNYTIGEVPISFVDRVYGESKLGGTEIFQFAKALL 429 (435)
Q Consensus 364 ~~~r~~~~~~~~~~~----~~~~~~D~el~lr~~~~G~~i~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~ 429 (435)
+|+.+.+.+...... ...++.|..+. .+.|.++..++- ....-+.+...-+..+..++
T Consensus 168 ~F~~~~L~~a~~~~~~~n~~~~~TD~~~~~---~~~g~~v~~v~g-----~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 168 GFTTDLLLRSYQRGSLDLPAAEYTDDASLV---EHIGGQVQVVDG-----DPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp EEEHHHHHHHHHHHTC-----CCSSSHHHH---HHTTCCCEEEEC-----CGGGCCCCSHHHHHHHHHHH
T ss_pred EEEHHHHHHHHHHHHhhcCCCCCCcHHHHH---HHcCCcEEEEEC-----CccccCcCCHHHHHHHHHHh
Confidence 899998888743221 12334555554 557988876554 12223455544444444443
No 102
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=78.95 E-value=6.3 Score=33.28 Aligned_cols=41 Identities=12% Similarity=0.245 Sum_probs=34.2
Q ss_pred CHHHHHHHHHhhcc----CCEEEEEcCCC-CCCCCcHHHHHHHHhc
Q psy3650 47 GLGTAYMHGLKYAT----GNFIIIMDADL-SHHPKFIPEMIKLQQQ 87 (435)
Q Consensus 47 g~~~a~n~gl~~a~----gd~i~~lD~D~-~~~~~~l~~~~~~~~~ 87 (435)
+...+.-.|++... .++++++|+|. .++++.+..+++.+.+
T Consensus 82 ~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 82 NRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp SHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 45677888888776 48999999998 6788999999999865
No 103
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=77.49 E-value=2.6 Score=40.03 Aligned_cols=55 Identities=15% Similarity=0.183 Sum_probs=44.3
Q ss_pred CCCCCCHHHHHHHHHhhcc--CCEEEEEcCCCC-CCCCcHHHHHHHHhcCCCcEEEEe
Q psy3650 42 RKKKLGLGTAYMHGLKYAT--GNFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGT 96 (435)
Q Consensus 42 ~~~n~g~~~a~n~gl~~a~--gd~i~~lD~D~~-~~~~~l~~~~~~~~~~~~~~v~g~ 96 (435)
.+...|.+.++..|++... .++++++++|.. +.+..+..+++...+.++++++..
T Consensus 81 ~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~ 138 (468)
T 1hm9_A 81 QSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILT 138 (468)
T ss_dssp CSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4556789999998988875 589999999995 688899999998877777765544
No 104
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=77.20 E-value=5.6 Score=35.11 Aligned_cols=60 Identities=15% Similarity=0.097 Sum_probs=44.9
Q ss_pred ceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCC----CC---cHHHHHHHHhcCCCcEEEE
Q psy3650 35 EKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHH----PK---FIPEMIKLQQQENLDVVTG 95 (435)
Q Consensus 35 ~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~----~~---~l~~~~~~~~~~~~~~v~g 95 (435)
..+.++......|.++++..|+.....+.++++.+|..+. +. .+..+++...+.+. .+++
T Consensus 102 ~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~i~ 168 (302)
T 2e3d_A 102 VTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH-SQIM 168 (302)
T ss_dssp CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-EEEE
T ss_pred cceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-cEEE
Confidence 3455555566789999999998887668899999999876 45 79999988765554 4444
No 105
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=76.49 E-value=5.8 Score=35.00 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=58.8
Q ss_pred EeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHh--CCceEEEecCCCCCCHHHHHHHHHhh
Q psy3650 206 LPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIY--GSEKIVLKPRKKKLGLGTAYMHGLKY 283 (435)
Q Consensus 206 ip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~--~~~~i~~~~~~~n~g~~~a~n~g~~~ 283 (435)
+|.++ ...+...++.+... . .-+|+||..... .+.++++.... -++.+.+...+...|.+.++..|++.
T Consensus 29 lpi~g-kpli~~~l~~l~~~----g-i~~I~vv~~~~~---~~~i~~~l~~g~~~g~~i~~~~~~~~~G~~~al~~a~~~ 99 (296)
T 1mc3_A 29 LPIYD-KPMIYYPLSVLMLA----G-IREILIITTPED---KGYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETF 99 (296)
T ss_dssp SEETT-EETTHHHHHHHHHT----T-CCEEEEEECTTT---HHHHHHHHTTSGGGTCEEEEEECSSCCCSTHHHHHTHHH
T ss_pred eEECC-eeHHHHHHHHHHhC----C-CCcEEEEechhH---HHHHHHHHhcccccCceEEEeccCCCCCHHHHHHHHHHH
Confidence 34454 46677777766541 1 237777754322 12233333221 12345454455567888888888887
Q ss_pred ccC-CEEEEEeCCCCCCCccHHHHHHHHhcCCCceEE
Q psy3650 284 ATG-NFIIIMDADLSHHPKFIPEMIKLQQQENLDVVT 319 (435)
Q Consensus 284 a~~-d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~ 319 (435)
... ++++++ +|..+....+..++....+.+.+.++
T Consensus 100 i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~v 135 (296)
T 1mc3_A 100 LNGEPSCLVL-GDNIFFGQGFSPKLRHVAARTEGATV 135 (296)
T ss_dssp HTTSCEEEEE-TTEEEECSSCHHHHHHHTTCCSSEEE
T ss_pred hCCCCEEEEE-CCccccccCHHHHHHHHHHcCCCCEE
Confidence 754 455544 99875446788888877544444433
No 106
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=76.09 E-value=4.9 Score=35.12 Aligned_cols=110 Identities=14% Similarity=0.061 Sum_probs=64.2
Q ss_pred ccCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHHHHHHHHHHHHhcCCCcccccccee
Q psy3650 284 ATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLRPGVSDLTGSFR 363 (435)
Q Consensus 284 a~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (435)
...+|+++.|+|+.+..+.|.+++..+ ++...+.+|.+..... ... ......... ...... ...+|+..
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~-d~~~~~YiG~~~~~~~------~~~--~~~~~~~~~-~~~~~~-y~~GGaG~ 160 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTF-PQDRDVYVGKPSLNRP------IHA--SELQSKQRT-KLVRFW-FATGGAGF 160 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTS-CTTSCCEEECEEC----------------------------CC-EECGGGCE
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhC-CCCCCEEEEEeccCcc------ccc--cccCccccc-cccccC-cccCCCEE
Confidence 467999999999999877777777765 4556777787653210 000 000000000 001111 23345568
Q ss_pred eecHHHHHHhhhccc---------CcccchhhHHHHHHH-HCCCcEEEeee
Q psy3650 364 LYKKQVLENLVSSCV---------SKGYVFQMEMVIRAR-QYNYTIGEVPI 404 (435)
Q Consensus 364 ~~~r~~~~~~~~~~~---------~~~~~~D~el~lr~~-~~G~~i~~~p~ 404 (435)
+++|++++++..... ...+.+|..|..=+. +.|.+....|.
T Consensus 161 vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~ 211 (280)
T 2j0a_A 161 CINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPL 211 (280)
T ss_dssp EEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTT
T ss_pred EECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceeccc
Confidence 999999999953111 223346888887787 88988776553
No 107
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=75.30 E-value=4.4 Score=33.18 Aligned_cols=51 Identities=18% Similarity=0.276 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHhhccC-CEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEEEe
Q psy3650 45 KLGLGTAYMHGLKYATG-NFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVTGT 96 (435)
Q Consensus 45 n~g~~~a~n~gl~~a~g-d~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~g~ 96 (435)
..|.+.+...|++.... ++++++++|. .++++.+..+++.. +.+.++++..
T Consensus 70 ~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~ 122 (197)
T 3d5n_A 70 NEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPT 122 (197)
T ss_dssp GGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEE
T ss_pred CCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEE
Confidence 35888899999988865 8999999999 56888999999877 5556665543
No 108
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=75.21 E-value=7.2 Score=33.51 Aligned_cols=35 Identities=11% Similarity=0.220 Sum_probs=28.0
Q ss_pred cCCEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEE
Q psy3650 60 TGNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVT 94 (435)
Q Consensus 60 ~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~ 94 (435)
..++++++++|. .+++..+..+++...+.++++++
T Consensus 90 ~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~ 125 (262)
T 1vic_A 90 DNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMAS 125 (262)
T ss_dssp TTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEE
Confidence 469999999999 56888999999988666666543
No 109
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=74.80 E-value=3 Score=39.36 Aligned_cols=49 Identities=12% Similarity=0.184 Sum_probs=40.3
Q ss_pred EccCCCCCCHHHHHHHHHhhccC-CEEEEEcCCC-CCCCCcHHHHHHHHhc
Q psy3650 39 LKPRKKKLGLGTAYMHGLKYATG-NFIIIMDADL-SHHPKFIPEMIKLQQQ 87 (435)
Q Consensus 39 ~~~~~~n~g~~~a~n~gl~~a~g-d~i~~lD~D~-~~~~~~l~~~~~~~~~ 87 (435)
++..+...|.+.++..|++.... ++++++++|. .+++..+..+++...+
T Consensus 76 ~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 76 WVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKPE 126 (459)
T ss_dssp EEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh
Confidence 33356677899999999998874 9999999999 5788899999998754
No 110
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=74.68 E-value=8.7 Score=33.75 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=40.6
Q ss_pred ceEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEE
Q psy3650 35 EKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVV 93 (435)
Q Consensus 35 ~~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v 93 (435)
..+.+...+...|.+.++..|+.....+-++++.+|..+.+..+..+++...+.+.+.+
T Consensus 75 ~~i~~~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~ 133 (293)
T 1fxo_A 75 LDLQYAVQPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQTGAS 133 (293)
T ss_dssp CEEEEEECSSCCCGGGHHHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTCCSSEE
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHhcCCCcE
Confidence 34555545566788888888888776565666669987655788899887754444443
No 111
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=74.53 E-value=27 Score=32.30 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHhhcc---CCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeee
Q psy3650 271 LGLGTAYMHGLKYAT---GNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTR 322 (435)
Q Consensus 271 ~g~~~a~n~g~~~a~---~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~ 322 (435)
.|.+.++..++.... .+.++++.+|... +..+.++++...+.+.+++.+..
T Consensus 108 ~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~~~~~tl~~~ 161 (420)
T 3brk_X 108 EGTADAVYQNIDIIEPYAPEYMVILAGDHIY-KMDYEYMLQQHVDSGADVTIGCL 161 (420)
T ss_dssp CCHHHHHHTTHHHHHHHCCSEEEEEESSCEE-CBCTHHHHHHHHHTTCSEEEEEE
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEecccEEE-chHHHHHHHHHHHcCCeEEEEEe
Confidence 688889888887754 4899999999954 45688898887666666655543
No 112
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=74.39 E-value=29 Score=29.35 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=35.4
Q ss_pred CCCCHHHHHHHHHhhc-cCCEEEEEeCCCCCCCccHHHHHHHHhcCCCce
Q psy3650 269 KKLGLGTAYMHGLKYA-TGNFIIIMDADLSHHPKFIPEMIKLQQQENLDV 317 (435)
Q Consensus 269 ~n~g~~~a~n~g~~~a-~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~ 317 (435)
...|.+.++..+.... ..+.++++.+|... +..+..+++...+.+.++
T Consensus 104 ~~~gt~~al~~a~~~~~~~~~~lv~~~D~~~-~~~~~~~~~~~~~~~~~~ 152 (259)
T 1tzf_A 104 DSSMTGGRLKRVAEYVKDDEAFLFTYGDGVA-DLDIKATIDFHKAHGKKA 152 (259)
T ss_dssp SSCCHHHHHHHTGGGTTTSSCEEEEETTEEE-CCCHHHHHHHHHHHCCSE
T ss_pred cccCcHHHHHHHHHhcCCCCcEEEEECCEec-ccCHHHHHHHHHHhCCeE
Confidence 3568888888888876 45788889999854 567899998775545444
No 113
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=74.32 E-value=8.1 Score=34.51 Aligned_cols=143 Identities=13% Similarity=0.049 Sum_probs=76.1
Q ss_pred eEEEecCCCCCCHHHHHHHHHhhccC--CEEEEEeCCCCCC-CccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHH
Q psy3650 261 KIVLKPRKKKLGLGTAYMHGLKYATG--NFIIIMDADLSHH-PKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRK 337 (435)
Q Consensus 261 ~i~~~~~~~n~g~~~a~n~g~~~a~~--d~v~~~d~D~~~~-~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 337 (435)
.+.++..+...|.+.++..++..... ++++++.+|..+. +..+..+++...+.+.. +++...........+.....
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~~-~i~~~~~~~~~~~~yg~v~~ 184 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGGS-VLCAVEVSEADVSKYGIFEI 184 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCSE-EEEEEECCGGGGGGSEEEEE
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCCc-EEEEEEecccccCCccEEEe
Confidence 45444455667999999998887643 5599999999886 68899999987655543 33322111000000110000
Q ss_pred H---HHHHHHHHHHHhcCC-----CccccccceeeecHHHHHHhhhcccC--cccchhhHHHHHHHHCCCcEEEeeeE
Q psy3650 338 L---VSRGANYLTQLLLRP-----GVSDLTGSFRLYKKQVLENLVSSCVS--KGYVFQMEMVIRARQYNYTIGEVPIS 405 (435)
Q Consensus 338 ~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~r~~~~~~~~~~~~--~~~~~D~el~lr~~~~G~~i~~~p~~ 405 (435)
- .......+....-.. .-....+|..+|++++|+.+...... ..+. -.+++-.+.+.|.++..++..
T Consensus 185 d~~~~~~~~~~V~~~~Ekp~~~~~~~~~~~~GiY~~~~~~~~~l~~~~~~~~ge~~-l~d~i~~l~~~g~~v~~~~~~ 261 (323)
T 2pa4_A 185 EADTKDSDVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGAGGELQ-LTDAIDLLIDEGHPVHIVIHQ 261 (323)
T ss_dssp EECCSSTTEEEEEEEEESCCTTTCSCSEEEEEEEEEETHHHHHHHHCCCCGGGCCC-HHHHHHHHHHTTCCEEEEECC
T ss_pred CCcccCCCceeEEEEEECCCCccccccEEEEEEEEECHHHHHHHHhhCCCCCCeEe-HHHHHHHHHHcCCCEEEEEeC
Confidence 0 000000000000000 11224567789999999877332211 1122 256677777888888776653
No 114
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=74.05 E-value=15 Score=33.83 Aligned_cols=106 Identities=10% Similarity=-0.004 Sum_probs=57.2
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHH---H
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLG---T 275 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~---~ 275 (435)
.++++.+|.+++..+.++++++.+ .. ..+.=.|-+|-.+++...+.+.++...++++.+.--...-..|.. .
T Consensus 83 ~~kiAflil~h~d~~~l~rll~~l----y~-p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v~~~~~~v~WGg~S~v~ 157 (391)
T 2gak_A 83 GFPIAYSIVVHHKIEMLDRLLRAI----YM-PQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVVYASWTRVK 157 (391)
T ss_dssp TSCEEEEEEECSCHHHHHHHHHHH----CC-TTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEECSSCCCCCTTSHHHHH
T ss_pred CCCEEEEEEecCCHHHHHHHHHHH----hC-CCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEEeccCcccccCCchHHH
Confidence 478999999998665444444333 22 224445667767666555555555555665433211222333322 2
Q ss_pred ----HHHHHHhhc-cCCEEEEEeCCCC--CCCccHHHHHHH
Q psy3650 276 ----AYMHGLKYA-TGNFIIIMDADLS--HHPKFIPEMIKL 309 (435)
Q Consensus 276 ----a~n~g~~~a-~~d~v~~~d~D~~--~~~~~l~~~~~~ 309 (435)
++..+++.. .-+|++.+.+.+. .+.+.|...+..
T Consensus 158 A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~ 198 (391)
T 2gak_A 158 ADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKC 198 (391)
T ss_dssp HHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHh
Confidence 233333332 4589988888875 444444444444
No 115
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=73.73 E-value=11 Score=31.80 Aligned_cols=44 Identities=9% Similarity=0.117 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHhhccCCEEEEEeCCCC-CCCccHHHHHHHHhcCC
Q psy3650 271 LGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPEMIKLQQQEN 314 (435)
Q Consensus 271 ~g~~~a~n~g~~~a~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~ 314 (435)
.|...++..|++....++++++++|.. ++++.+..+++.+.+.+
T Consensus 91 ~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2px7_A 91 ATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSG 135 (236)
T ss_dssp SSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred CchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 467888889998887899999999974 78899999998875433
No 116
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=73.43 E-value=0.7 Score=37.97 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=34.3
Q ss_pred eEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCC-CCCCCcHHHHHHHHhc
Q psy3650 36 KIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADL-SHHPKFIPEMIKLQQQ 87 (435)
Q Consensus 36 ~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~-~~~~~~l~~~~~~~~~ 87 (435)
.+.++. ....|.+.++..|++.. .++++++.+|. .++++.+..+++.+.+
T Consensus 69 ~~~~~~-~~~~g~~~si~~al~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 69 NIVVID-TSGKGYIEDLNECIGYF-SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp EEEE---------CCCCCTTTTTC-SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CEEEEE-CCCCCcHHHHHHHHHhC-CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 344443 33456666777788777 89999999999 5799999999999865
No 117
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=73.13 E-value=8 Score=32.28 Aligned_cols=77 Identities=13% Similarity=0.081 Sum_probs=49.1
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCCCCCHHHHHHHHHhhcc--CCEEEEEcCCC-CCCCCcHHHHHHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYAT--GNFIIIMDADL-SHHPKFIPEMIKL 84 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~gl~~a~--gd~i~~lD~D~-~~~~~~l~~~~~~ 84 (435)
-+|+||-+. ...++.+.+..... ..+.++. +..|...+...|++... .++++.+|+|. .++++.+..+++.
T Consensus 49 ~~ivvv~~~---~~~~~~~~~~~~~~-~~v~~~~--~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~ 122 (228)
T 2yc3_A 49 KEIVVVCDP---FFRDIFEEYEESID-VDLSFAI--PGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKD 122 (228)
T ss_dssp EEEEEECCG---GGHHHHHTTTTTSS-SEEEEEC--CCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CeEEEEECh---HHHHHHHHHHHhCC-CcEEEEC--CCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHH
Confidence 467777432 22234444433221 2344433 23578888888988765 38999999997 6788899999988
Q ss_pred HhcCCC
Q psy3650 85 QQQENL 90 (435)
Q Consensus 85 ~~~~~~ 90 (435)
..+.++
T Consensus 123 ~~~~~~ 128 (228)
T 2yc3_A 123 GSAVGA 128 (228)
T ss_dssp HHHHSE
T ss_pred HHhcCc
Confidence 765443
No 118
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=73.13 E-value=10 Score=33.40 Aligned_cols=51 Identities=12% Similarity=0.024 Sum_probs=38.2
Q ss_pred CCCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHHHHhc---CCCcEEEE
Q psy3650 44 KKLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIKLQQQ---ENLDVVTG 95 (435)
Q Consensus 44 ~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~---~~~~~v~g 95 (435)
+..|.++++..+.....++ ++++.+|..++++.+..+++...+ .+.++.+.
T Consensus 99 ~~~Gt~~al~~a~~~i~~~-~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~ 152 (303)
T 3pnn_A 99 KPWGTNHAVLMGRDAIREP-FAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMV 152 (303)
T ss_dssp SCCCHHHHHHTTTTTCCSC-EEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEE
T ss_pred ccCCcHHHHHHHHHhcCCC-EEEEECCeecCHHHHHHHHHHHHHhccccCceEEE
Confidence 4579999999998887555 556679998888889999988764 34555443
No 119
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=72.85 E-value=25 Score=30.43 Aligned_cols=106 Identities=11% Similarity=0.149 Sum_probs=58.9
Q ss_pred CcceEEEEeccCCCCChHHHHHHHHHHhhcC-CCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCC-CH---
Q psy3650 199 KNKYTVLLPTYNEKENLPIIVYLITKYMDEG-NYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKL-GL--- 273 (435)
Q Consensus 199 ~~~isivip~~n~~~~l~~~l~~l~~~~~~~-~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~-g~--- 273 (435)
++.+.|++.+ ....+..+...+.+.+... ..++.+.|+.++-+++..+.++++.... +..+..+..+... ..
T Consensus 3 ~m~i~I~~~~--d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~~~~~~~~~~~~ 79 (276)
T 3tzt_A 3 AMADALLLTL--DENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKF-SYTLYPIRATDDLFSFAKV 79 (276)
T ss_dssp --CEEEEEEC--CGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTT-TCEEEEEECC---------
T ss_pred ceeEEEEEEe--CHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHc-CCEEEEEEeCHHHHhcCcc
Confidence 3456666554 2334555544444444333 2478999999998888888888876654 3455555433211 10
Q ss_pred -------HHHHHHHHhhc--cCCEEEEEeCCCCCCCccHHHHHH
Q psy3650 274 -------GTAYMHGLKYA--TGNFIIIMDADLSHHPKFIPEMIK 308 (435)
Q Consensus 274 -------~~a~n~g~~~a--~~d~v~~~d~D~~~~~~~l~~~~~ 308 (435)
...+-..-... .-+-++++|+|..+-. .+.++.+
T Consensus 80 ~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~-di~~L~~ 122 (276)
T 3tzt_A 80 TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN-PLDDLLR 122 (276)
T ss_dssp ----CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS-CSHHHHT
T ss_pred ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC-CHHHHhh
Confidence 01111111222 3589999999997654 4666665
No 120
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=72.80 E-value=4.2 Score=35.82 Aligned_cols=55 Identities=15% Similarity=0.176 Sum_probs=43.6
Q ss_pred eEEEccCCCCCCHHHHHHHHHhhccCCEEEEEcCCCCCC--CCcHHHHHHHHhcCCC
Q psy3650 36 KIVLKPRKKKLGLGTAYMHGLKYATGNFIIIMDADLSHH--PKFIPEMIKLQQQENL 90 (435)
Q Consensus 36 ~i~~~~~~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~--~~~l~~~~~~~~~~~~ 90 (435)
.+.++..+...|.+.++..|+.....+.++++.+|..+. +..+..+++...+.+.
T Consensus 107 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~ 163 (297)
T 2ux8_A 107 NIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG 163 (297)
T ss_dssp SEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS
T ss_pred ceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC
Confidence 455555566779999999998887678999999999887 6899999988765554
No 121
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=72.51 E-value=6.4 Score=33.04 Aligned_cols=46 Identities=13% Similarity=0.131 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHhhc----c---CCEEEEEcCCC-CCCCCcHHHHHHHHhcCCC
Q psy3650 45 KLGLGTAYMHGLKYA----T---GNFIIIMDADL-SHHPKFIPEMIKLQQQENL 90 (435)
Q Consensus 45 n~g~~~a~n~gl~~a----~---gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~ 90 (435)
..|...+...|+..+ . .++++++++|. .+++..+..+++...+.++
T Consensus 83 ~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 136 (236)
T 2vsh_A 83 GADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA 136 (236)
T ss_dssp CSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE
T ss_pred CCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc
Confidence 356778888888876 3 38999999999 6788899999998866543
No 122
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=72.12 E-value=9.3 Score=31.67 Aligned_cols=40 Identities=18% Similarity=0.288 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHhhc-cCCEEEEEcCCC-CCCCCcHHHHHHHH
Q psy3650 46 LGLGTAYMHGLKYA-TGNFIIIMDADL-SHHPKFIPEMIKLQ 85 (435)
Q Consensus 46 ~g~~~a~n~gl~~a-~gd~i~~lD~D~-~~~~~~l~~~~~~~ 85 (435)
.+.+.+...|++.. ..++++++++|. .++++.+..+++..
T Consensus 77 ~~~~~~i~~al~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 77 VDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp SSHHHHHHHHHTTCTTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcCCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 45678888999887 679999999999 56888999999887
No 123
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=71.82 E-value=5.9 Score=33.39 Aligned_cols=44 Identities=18% Similarity=0.309 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHhhcc-CCEEEEEcCCC-CCCCCcHHHHHHHHhcCC
Q psy3650 46 LGLGTAYMHGLKYAT-GNFIIIMDADL-SHHPKFIPEMIKLQQQEN 89 (435)
Q Consensus 46 ~g~~~a~n~gl~~a~-gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~ 89 (435)
.|...+...|++.+. .++++++++|. .++++.+..+++...+.+
T Consensus 83 ~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 83 DERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp SSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred CCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 478888888998875 69999999998 568889999998775544
No 124
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=71.60 E-value=21 Score=31.23 Aligned_cols=58 Identities=10% Similarity=0.236 Sum_probs=38.6
Q ss_pred ceEEEccCCCCCCHHHHHHHHHhhccC-CEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEE
Q psy3650 35 EKIVLKPRKKKLGLGTAYMHGLKYATG-NFIIIMDADLSHHPKFIPEMIKLQQQENLDVV 93 (435)
Q Consensus 35 ~~i~~~~~~~n~g~~~a~n~gl~~a~g-d~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v 93 (435)
..+.+...+...|.+.++..|+..... ++++++ +|..+....+..+++...+.+.+.+
T Consensus 76 ~~i~~~~~~~~~G~~~al~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~ 134 (295)
T 1lvw_A 76 VRFSYRVQEEPRGIADAFIVGKDFIGDSKVALVL-GDNVFYGHRFSEILRRAASLEDGAV 134 (295)
T ss_dssp SEEEEEECSSCCCGGGHHHHTHHHHTTSCEEEEE-TTCCEECTTHHHHHHHHHTCCSSEE
T ss_pred ceEEEeeCCCCCChHHHHHHHHHHhCCCcEEEEE-CCccccCcCHHHHHHHHHHcCCCcE
Confidence 345444445567888888888877654 555555 9987655788888887754444443
No 125
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=64.69 E-value=21 Score=31.36 Aligned_cols=58 Identities=10% Similarity=0.174 Sum_probs=37.8
Q ss_pred eEEEccCCCCCCHHHHHHHHHhhccC-CEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEEE
Q psy3650 36 KIVLKPRKKKLGLGTAYMHGLKYATG-NFIIIMDADLSHHPKFIPEMIKLQQQENLDVVT 94 (435)
Q Consensus 36 ~i~~~~~~~n~g~~~a~n~gl~~a~g-d~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~ 94 (435)
.+.+...+...|.+.++..|+..... ++++++ +|..+.+..+..+++...+.+.+.++
T Consensus 77 ~i~~~~~~~~~G~~~al~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~v 135 (296)
T 1mc3_A 77 QLEYAEQPSPDGLAQAFIIGETFLNGEPSCLVL-GDNIFFGQGFSPKLRHVAARTEGATV 135 (296)
T ss_dssp EEEEEECSSCCCSTHHHHHTHHHHTTSCEEEEE-TTEEEECSSCHHHHHHHTTCCSSEEE
T ss_pred eEEEeccCCCCCHHHHHHHHHHHhCCCCEEEEE-CCccccccCHHHHHHHHHHcCCCCEE
Confidence 45444445567888888888877654 455555 99866556788888877544444443
No 126
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=61.75 E-value=31 Score=30.89 Aligned_cols=107 Identities=17% Similarity=0.171 Sum_probs=56.1
Q ss_pred EeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhcc
Q psy3650 206 LPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYAT 285 (435)
Q Consensus 206 ip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~ 285 (435)
+|..++...+..+++.+... .. .-+|+|+-+.. ....+.+.....+...+.. ++...|.+.++..+.....
T Consensus 28 l~l~g~~pli~~~l~~l~~~---~~-~~~iivvt~~~---~~~~i~~~l~~~~~~~ii~--e~~~~gta~ai~~a~~~~~ 98 (336)
T 2x65_A 28 LKLFGNKSLMRWTFERVLEE---MD-PKDVIVVTHKD---YVERTKKELPELPDENIIA--EPMKKNTAPACFIGTKLAD 98 (336)
T ss_dssp CCCBTTBCHHHHHHHHHHTT---CC-GGGEEEEEEGG---GHHHHHHHCTTSCGGGEEE--ESSCCCHHHHHHHHHTTSC
T ss_pred EECCCCCcHHHHHHHHHhcc---CC-CCcEEEEcChH---HHHHHHHHhhccccceEEe--CCCCCCcHHHHHHHHHhhC
Confidence 45555456667777666431 01 12555554321 1222333222222224433 3445688888877776543
Q ss_pred -CCEEEEEeCCCCC-CCccHHHHHHH----HhcCCCceEEee
Q psy3650 286 -GNFIIIMDADLSH-HPKFIPEMIKL----QQQENLDVVTGT 321 (435)
Q Consensus 286 -~d~v~~~d~D~~~-~~~~l~~~~~~----~~~~~~~~v~~~ 321 (435)
.++++++.+|..+ .++.+..+++. .++.+..+..|.
T Consensus 99 ~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i 140 (336)
T 2x65_A 99 DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGI 140 (336)
T ss_dssp TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 4799999999975 44555554443 333244454443
No 127
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=61.33 E-value=16 Score=30.70 Aligned_cols=51 Identities=10% Similarity=0.141 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHhhccCCEEEEEcCCCC-CCCCcHHHHHHHHhcCCCcEEEEe
Q psy3650 43 KKKLGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGT 96 (435)
Q Consensus 43 ~~n~g~~~a~n~gl~~a~gd~i~~lD~D~~-~~~~~l~~~~~~~~~~~~~~v~g~ 96 (435)
....|.+++...|++... ++++++++|.. ++++.+..+++ . +.+.++++..
T Consensus 67 ~~~~g~~~~i~~a~~~~~-~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~ 118 (232)
T 2dpw_A 67 PDRGGLLENLEQALEHVE-GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPI 118 (232)
T ss_dssp CCCSSHHHHHHHHHHTCC-SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEE
T ss_pred cCCCCHHHHHHHHHHHcC-CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEE
Confidence 345688999999998877 99999999994 68889999998 4 5566666554
No 128
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=61.21 E-value=9.3 Score=35.89 Aligned_cols=52 Identities=12% Similarity=0.214 Sum_probs=40.6
Q ss_pred cCCCCCCHHHHHHHHHhhcc-CCEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEE
Q psy3650 41 PRKKKLGLGTAYMHGLKYAT-GNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVT 94 (435)
Q Consensus 41 ~~~~n~g~~~a~n~gl~~a~-gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~ 94 (435)
..++..|.+.++..|++... .++++++++|. .+++..+..+++...+ .++++
T Consensus 75 ~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~ 128 (456)
T 2v0h_A 75 LQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPE--NGIAL 128 (456)
T ss_dssp ECSCCCCHHHHHHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEE
T ss_pred eCCCCCCcHHHHHHHHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEE
Confidence 34556788999999998875 69999999999 4688899999987744 34443
No 129
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=57.75 E-value=19 Score=30.52 Aligned_cols=53 Identities=19% Similarity=0.343 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHHHhhc---cCCEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEEEee
Q psy3650 43 KKKLGLGTAYMHGLKYA---TGNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVTGTR 97 (435)
Q Consensus 43 ~~n~g~~~a~n~gl~~a---~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~g~~ 97 (435)
+...|.+..++.|++.+ ..+-++++-+|. .+.+..|..+++.+.+ .++|+|+.
T Consensus 82 q~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~--~d~VigPa 138 (242)
T 3cgx_A 82 QQGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH--YDAAIGPA 138 (242)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT--CSEEEEEB
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc--CCeEEEEc
Confidence 45668999999999986 347899999999 7889999999987743 57888774
No 130
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=55.99 E-value=14 Score=32.97 Aligned_cols=55 Identities=20% Similarity=0.155 Sum_probs=41.8
Q ss_pred eEEEccCCCCCCHHHHHHHHHhhccC--CEEEEEcCCCCCC-CCcHHHHHHHHhcCCC
Q psy3650 36 KIVLKPRKKKLGLGTAYMHGLKYATG--NFIIIMDADLSHH-PKFIPEMIKLQQQENL 90 (435)
Q Consensus 36 ~i~~~~~~~n~g~~~a~n~gl~~a~g--d~i~~lD~D~~~~-~~~l~~~~~~~~~~~~ 90 (435)
.+.++..+...|.+.++..|+..... |+++++.+|..++ +..+..+++...+.+.
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~ 163 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG 163 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC
Confidence 45444455667999999998887654 4589999999887 6899999998866554
No 131
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=54.84 E-value=12 Score=32.54 Aligned_cols=108 Identities=14% Similarity=0.032 Sum_probs=58.3
Q ss_pred ccCCEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEEEEeeeecCCCccCcccchhhhhchHHHHHHHHhCCCcccccccee
Q psy3650 59 ATGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLRPGVSDLTGSFR 138 (435)
Q Consensus 59 a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (435)
...+|+++.|+|+.+..+.|..++..+ ++...+-+|......... . ....+... ....... .-..|+..
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~-d~~~~~YiG~~~~~~~~~----~-~~~~~~~~----~~~~~~~-y~~GGaG~ 160 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTF-PQDRDVYVGKPSLNRPIH----A-SELQSKQR----TKLVRFW-FATGGAGF 160 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTS-CTTSCCEEECEEC----------------------------CC-EECGGGCE
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhC-CCCCCEEEEEeccCcccc----c-cccCcccc----ccccccC-cccCCCEE
Confidence 357999999999999888888887766 345566677654221100 0 00000000 0001112 22234457
Q ss_pred hhhHHHHHHhhcccc---------ccCchhhHHHHHHHH-hhcceeEee
Q psy3650 139 LYKKQVLENLVSSCV---------SKGYVFQMEMVIRAR-QYNYTIGEV 177 (435)
Q Consensus 139 ~~~~~~~~~~~~~~~---------~~~~~~d~~l~~r~~-~~g~~~~~~ 177 (435)
++++++++++..... ...+..|..+..=+. +.|......
T Consensus 161 vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~ 209 (280)
T 2j0a_A 161 CINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPS 209 (280)
T ss_dssp EEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEEC
T ss_pred EECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceec
Confidence 999999998843111 123345777766555 678776554
No 132
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=53.30 E-value=34 Score=28.94 Aligned_cols=50 Identities=10% Similarity=0.029 Sum_probs=36.8
Q ss_pred CCCCHHHHHHHHHhhc-cCCEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEEE
Q psy3650 44 KKLGLGTAYMHGLKYA-TGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVT 94 (435)
Q Consensus 44 ~n~g~~~a~n~gl~~a-~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~ 94 (435)
...|.++++..++... ..+.++++.+|.. .+..+..+++...+.+.++.+
T Consensus 104 ~~~gt~~al~~a~~~~~~~~~~lv~~~D~~-~~~~~~~~~~~~~~~~~~~t~ 154 (259)
T 1tzf_A 104 DSSMTGGRLKRVAEYVKDDEAFLFTYGDGV-ADLDIKATIDFHKAHGKKATL 154 (259)
T ss_dssp SSCCHHHHHHHTGGGTTTSSCEEEEETTEE-ECCCHHHHHHHHHHHCCSEEE
T ss_pred cccCcHHHHHHHHHhcCCCCcEEEEECCEe-cccCHHHHHHHHHHhCCeEEE
Confidence 3568888988888876 3578888999984 566788888877655555543
No 133
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=51.96 E-value=62 Score=27.45 Aligned_cols=177 Identities=13% Similarity=0.071 Sum_probs=83.8
Q ss_pred CChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHh--CCceEEEecCCCCCCHHHHHHHHHhhc------
Q psy3650 213 ENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIY--GSEKIVLKPRKKKLGLGTAYMHGLKYA------ 284 (435)
Q Consensus 213 ~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~--~~~~i~~~~~~~n~g~~~a~n~g~~~a------ 284 (435)
..+..+++.+.+. .. .-+|++|-....+ ..+.+++..... +...+.+. .+...|.+.++..|+...
T Consensus 31 pli~~~l~~l~~~---~g-i~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gt~~av~~a~~~l~~~~~~ 104 (255)
T 4evw_A 31 TLFEHSVNSFAAY---FA-STPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAEL-HTETRGQAETVTLGLEELAKQGVD 104 (255)
T ss_dssp EHHHHHHGGGGGG---TT-TSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEE-SSCCSSHHHHHHHHHHHHHHTTCC
T ss_pred EHHHHHHHHHhcc---CC-CceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEe-CCCCCCHHHHHHHHHHHHhhcccC
Confidence 4555555444321 12 2266655543333 444454433332 22234444 456779999999999887
Q ss_pred cCCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEeeeEECCCceeccchhHHHHHHHHHHHHHHhcCCC-cccccccee
Q psy3650 285 TGNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLRPG-VSDLTGSFR 363 (435)
Q Consensus 285 ~~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 363 (435)
..+-++++++|..+....+..+ .. +.+.++......+. ++.+...-... ...+.+..-... -.....|..
T Consensus 105 ~~~~~lV~~gD~l~~~~~~~~~----~~-~~~~~i~~~~~~~p---~yG~v~~d~~g-~~~V~~i~EK~~~s~~~~~GiY 175 (255)
T 4evw_A 105 YQGSITVFNIDTFRPNFVFPDI----SQ-HSDGYLEVFQGGGD---NWSFAKPEHAG-STKVIQTAEKNPISDLCSTGLY 175 (255)
T ss_dssp CCSCEEECCTTEECTTCCCCGG----GG-SSSEEEEEEECCSS---CSCEEEESSTT-CCBEEEEESSSCSSSEEEEEEE
T ss_pred CCCcEEEEeCCEEEecchhHHH----hh-cCCcEEEEEecCCC---ceeEEEECCCC-CeEEEEEEeccCccCcEEEeEE
Confidence 2466889999987644444432 22 33433332222211 11111100000 000000000011 123456677
Q ss_pred eecHH-HHH----Hhhhcc-cC--cccchhhHHHHHHHHCCCcEEEeee
Q psy3650 364 LYKKQ-VLE----NLVSSC-VS--KGYVFQMEMVIRARQYNYTIGEVPI 404 (435)
Q Consensus 364 ~~~r~-~~~----~~~~~~-~~--~~~~~D~el~lr~~~~G~~i~~~p~ 404 (435)
+|++. .|. ++.... .. .+-.+-.++.-++.+.|.++..+++
T Consensus 176 ~f~~~~~~~~~l~~~i~~~~~~~~~gE~~ltd~i~~li~~g~~v~~~~~ 224 (255)
T 4evw_A 176 HFNRKEDYLEAYREYVARPSQEWERGELYIAPLYNELIQKGLNIHYHLI 224 (255)
T ss_dssp EESCHHHHHHHHHHHHTSCGGGCSCSCCCSTTHHHHHHHTTCCEEEEEC
T ss_pred EECcHHHHHHHHHHHHhcccccccCCeEehHHHHHHHHHCCCEEEEEEe
Confidence 88875 232 221111 11 2222356788888999999887765
No 134
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=51.53 E-value=13 Score=31.06 Aligned_cols=84 Identities=13% Similarity=0.129 Sum_probs=47.0
Q ss_pred CChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCC-CCHHHHHHHHHhhccCCEEEE
Q psy3650 213 ENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKK-LGLGTAYMHGLKYATGNFIII 291 (435)
Q Consensus 213 ~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n-~g~~~a~n~g~~~a~~d~v~~ 291 (435)
..+..+++.+.+. .-+|+|+- ...+ ++.+.+...+ ...+.++.++.. .|.+.++..|++.... .+++
T Consensus 46 pli~~~l~~l~~~------~~~i~vv~-~~~~---~~~~~~~~~~-~~~~~~v~~~~~~~g~~~~i~~a~~~~~~-~~lv 113 (232)
T 2xme_A 46 EIILRTMKLLSPH------VSEFIIVA-SRYA---DDIDAFLKDK-GFNYKIVRHDRPEKGNGYSLLVAKNHVED-RFIL 113 (232)
T ss_dssp EHHHHHHHHHGGG------EEEEEEEE-STTH---HHHHHHHTTS-CCCEEEEECSCGGGCHHHHHHTTGGGCCS-SEEE
T ss_pred EHHHHHHHHHHHh------CCEEEEEe-CChH---HHHHHHHHhc-CCcEEEEECCCCCCCcHHHHHHHHHHCCC-CEEE
Confidence 4455555554332 23677765 3222 2233332322 123545444332 5788888888888764 4567
Q ss_pred EeCCCCCCCccHHHHHH
Q psy3650 292 MDADLSHHPKFIPEMIK 308 (435)
Q Consensus 292 ~d~D~~~~~~~l~~~~~ 308 (435)
+.+|..++++.+..+++
T Consensus 114 ~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 114 TMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp EETTEEECHHHHHHHTT
T ss_pred EcCCcccCHHHHHHHHh
Confidence 89998777666666654
No 135
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=50.86 E-value=16 Score=30.06 Aligned_cols=47 Identities=30% Similarity=0.258 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHhhccCCEEEEEcCCC-CCCCCcHHHHHHHHhcCCCcEEEEee
Q psy3650 46 LGLGTAYMHGLKYATGNFIIIMDADL-SHHPKFIPEMIKLQQQENLDVVTGTR 97 (435)
Q Consensus 46 ~g~~~a~n~gl~~a~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~~~~v~g~~ 97 (435)
.|.+.++..|++.+ .++++++-+|. .++++.+..+++ .+.+.++++.
T Consensus 74 ~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~----~~~~~vv~p~ 121 (211)
T 2i5e_A 74 KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS----TEKDVCIVPG 121 (211)
T ss_dssp SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT----CSSSEEEEEC
T ss_pred CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc----cCCCeEEEEe
Confidence 68999999999877 78999999999 668888888876 3456676664
No 136
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=48.62 E-value=18 Score=30.32 Aligned_cols=45 Identities=9% Similarity=0.083 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHhhccCCEEEEEcCCC-CCCCCcHHHHHHHHhcCC
Q psy3650 45 KLGLGTAYMHGLKYATGNFIIIMDADL-SHHPKFIPEMIKLQQQEN 89 (435)
Q Consensus 45 n~g~~~a~n~gl~~a~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~ 89 (435)
..|...+...|++.+..++++++++|. .++++.+..+++.+.+.+
T Consensus 90 ~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2px7_A 90 GATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSG 135 (236)
T ss_dssp CSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 346788888899888789999999998 568889999998875544
No 137
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=47.67 E-value=79 Score=25.72 Aligned_cols=47 Identities=30% Similarity=0.276 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHhhccCCEEEEEeCCCC-CCCccHHHHHHHHhcCCCceEEeee
Q psy3650 271 LGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGTR 322 (435)
Q Consensus 271 ~g~~~a~n~g~~~a~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~~ 322 (435)
.|.+.++..|++.. .+.++++-+|.- ++++.+..++. .+.+.++++.
T Consensus 74 ~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~----~~~~~vv~p~ 121 (211)
T 2i5e_A 74 KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS----TEKDVCIVPG 121 (211)
T ss_dssp SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT----CSSSEEEEEC
T ss_pred CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc----cCCCeEEEEe
Confidence 68899999998877 688999999995 89999998887 3445565554
No 138
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=46.27 E-value=67 Score=29.89 Aligned_cols=49 Identities=14% Similarity=0.065 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHhhcc---CCEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEEEE
Q psy3650 46 LGLGTAYMHGLKYAT---GNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTG 95 (435)
Q Consensus 46 ~g~~~a~n~gl~~a~---gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~g 95 (435)
.|.+.++..++.... .+.++++.+|... +..+..+++...+.++++.++
T Consensus 118 ~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~~~~~tl~ 169 (451)
T 1yp2_A 118 QGTADAVRQYLWLFEEHTVLEYLILAGDHLY-RMDYEKFIQAHRETDADITVA 169 (451)
T ss_dssp CSHHHHHHHTHHHHTTSCCSEEEEECSCEEC-CCCHHHHHHHHHHTTCSEEEE
T ss_pred cCcHHHHHHHHHHHHhcCCCeEEEecCcEEE-cCCHHHHHHHHHHcCCcEEEE
Confidence 688999888887765 5899999999954 456888988876677776554
No 139
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=45.90 E-value=1e+02 Score=28.29 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHhhcc---CCEEEEEcCCCCCCCCcHHHHHHHHhcCCCcEEEEee
Q psy3650 46 LGLGTAYMHGLKYAT---GNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGTR 97 (435)
Q Consensus 46 ~g~~~a~n~gl~~a~---gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~g~~ 97 (435)
.|.+.++..|+.... .++++++.+|.. .+..+..+++...+.+++++++..
T Consensus 108 ~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~-~~~~l~~l~~~~~~~~~~~tl~~~ 161 (420)
T 3brk_X 108 EGTADAVYQNIDIIEPYAPEYMVILAGDHI-YKMDYEYMLQQHVDSGADVTIGCL 161 (420)
T ss_dssp CCHHHHHHTTHHHHHHHCCSEEEEEESSCE-ECBCTHHHHHHHHHTTCSEEEEEE
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEecccEE-EchHHHHHHHHHHHcCCeEEEEEe
Confidence 688899888887764 389999999995 455688888887667777755543
No 140
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=45.66 E-value=13 Score=31.08 Aligned_cols=70 Identities=14% Similarity=0.186 Sum_probs=41.2
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHhCCceEEEccCCC-CCCHHHHHHHHHhhccCCEEEEEcCCCCCCCCcHHHHHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKK-KLGLGTAYMHGLKYATGNFIIIMDADLSHHPKFIPEMIK 83 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~~~~~i~~~~~~~-n~g~~~a~n~gl~~a~gd~i~~lD~D~~~~~~~l~~~~~ 83 (435)
-+|+||- .. ..++.+.+.+.+. ..+.++..+. ..|.+.++..|++.... .++++.+|..++++.+..+++
T Consensus 60 ~~i~vv~-~~---~~~~~~~~~~~~~-~~~~~v~~~~~~~g~~~~i~~a~~~~~~-~~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 60 SEFIIVA-SR---YADDIDAFLKDKG-FNYKIVRHDRPEKGNGYSLLVAKNHVED-RFILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp EEEEEEE-ST---THHHHHHHHTTSC-CCEEEEECSCGGGCHHHHHHTTGGGCCS-SEEEEETTEEECHHHHHHHTT
T ss_pred CEEEEEe-CC---hHHHHHHHHHhcC-CcEEEEECCCCCCCcHHHHHHHHHHCCC-CEEEEcCCcccCHHHHHHHHh
Confidence 3667764 22 2234444433222 2344444333 36888999999988774 456788998776666666554
No 141
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=44.53 E-value=37 Score=29.93 Aligned_cols=93 Identities=12% Similarity=0.088 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHH-hhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCC--------CC----HHHHHHHH
Q psy3650 214 NLPIIVYLITKY-MDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKK--------LG----LGTAYMHG 280 (435)
Q Consensus 214 ~l~~~l~~l~~~-~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n--------~g----~~~a~n~g 280 (435)
.+..+...+.+. +.....++.++|++++-++...+.++++...+. ..+..+..+.. .+ ....+-..
T Consensus 11 Y~~~~~vli~Sl~l~~~~~~~~f~il~~~ls~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l 89 (311)
T 1g9r_A 11 YAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGG-GNIRFIDVNPEDFAGFPLNIRHISITTYARLKL 89 (311)
T ss_dssp GHHHHHHHHHHHHHTCTTSCCEEEEEESSCCHHHHHHHHHHSGGGT-TTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGH
T ss_pred HHHHHHHHHHHHHHHcCCCCceEEEEECCCCHHHHHHHHHHHHHcC-CEEEEEEcCHHHHhcCccccccCCHHHHHHHHH
Confidence 455555555555 455556789999998888888888888755432 23443321110 11 11111122
Q ss_pred Hhh-ccCCEEEEEeCCCCCCCccHHHHHH
Q psy3650 281 LKY-ATGNFIIIMDADLSHHPKFIPEMIK 308 (435)
Q Consensus 281 ~~~-a~~d~v~~~d~D~~~~~~~l~~~~~ 308 (435)
-.. ..-+-|+++|+|..+-.+ |.++.+
T Consensus 90 ~~ll~~~~kvlyLD~D~iv~~d-i~eL~~ 117 (311)
T 1g9r_A 90 GEYIADCDKVLYLDIDVLVRDS-LTPLWD 117 (311)
T ss_dssp HHHCCSCSCEEEECSSEEECSC-CHHHHT
T ss_pred HHHhhhcCEEEEEcCCeEeccC-HHHHhc
Confidence 222 245889999999987654 666654
No 142
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=42.78 E-value=33 Score=27.89 Aligned_cols=39 Identities=13% Similarity=0.127 Sum_probs=33.0
Q ss_pred CCCCHHHHHHHHHhhccCCEEEEEcCCCC-CCCCcHHH-HH
Q psy3650 44 KKLGLGTAYMHGLKYATGNFIIIMDADLS-HHPKFIPE-MI 82 (435)
Q Consensus 44 ~n~g~~~a~n~gl~~a~gd~i~~lD~D~~-~~~~~l~~-~~ 82 (435)
...|.++++..|++....++++++.+|.. ++++.+.. ++
T Consensus 80 ~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 80 EESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp SSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 45699999999999988899999999995 57777777 66
No 143
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=38.97 E-value=1.7e+02 Score=27.64 Aligned_cols=110 Identities=11% Similarity=0.101 Sum_probs=58.9
Q ss_pred eccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhC--CceEEEecCC----------------
Q psy3650 207 PTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYG--SEKIVLKPRK---------------- 268 (435)
Q Consensus 207 p~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~--~~~i~~~~~~---------------- 268 (435)
|+.+....++..++++...-......+.++++..+.+. +.++++-+++. +..+..+...
T Consensus 116 ~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~---e~t~~~~~~~~~fg~~i~~f~Q~~~P~i~~d~~~~l~~~ 192 (488)
T 2i5k_A 116 EVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTD---KDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTE 192 (488)
T ss_dssp CCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTH---HHHHHHHGGGCSSSCEEEEECCCCEECEETTTCCBSCSS
T ss_pred ccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCH---HHHHHHHHhccccCceEEEEEeCccceEccccceeeccC
Confidence 44446666777777776532211234567777554332 22333333332 2244444222
Q ss_pred --------CCCCHHHHHHHH-----Hhh--cc-CCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEe
Q psy3650 269 --------KKLGLGTAYMHG-----LKY--AT-GNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTG 320 (435)
Q Consensus 269 --------~n~g~~~a~n~g-----~~~--a~-~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~ 320 (435)
...|.|.+.... +.. .. .++++++++|+......+. ++......+.++..-
T Consensus 193 ~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~L~~~~~~~a~~t~~ 259 (488)
T 2i5k_A 193 YDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-ILNHMIETGAEYIME 259 (488)
T ss_dssp SSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-HHHHHHHSCCSEEEE
T ss_pred CCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-HHHHHHhcCCcEEEE
Confidence 445777666522 232 23 4899999999966556665 446655556555543
No 144
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=37.18 E-value=36 Score=28.28 Aligned_cols=43 Identities=9% Similarity=0.276 Sum_probs=33.6
Q ss_pred CHHHHHHHHHhhc---cCCEEEEEcCCC-CCCCCcHHHHHHHHhcCC
Q psy3650 47 GLGTAYMHGLKYA---TGNFIIIMDADL-SHHPKFIPEMIKLQQQEN 89 (435)
Q Consensus 47 g~~~a~n~gl~~a---~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~ 89 (435)
+...+...|++.+ ..++++++++|. .++++.+..+++.+.+.+
T Consensus 90 ~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~ 136 (234)
T 1vpa_A 90 TRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETG 136 (234)
T ss_dssp SHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 3666777788776 358999999999 578889999998875543
No 145
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=36.66 E-value=76 Score=26.79 Aligned_cols=82 Identities=11% Similarity=0.026 Sum_probs=42.2
Q ss_pred CChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhccCCEEEEE
Q psy3650 213 ENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATGNFIIIM 292 (435)
Q Consensus 213 ~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~~d~v~~~ 292 (435)
..+..+++.+.+. . .-+|+||-+...+...+.+ ..+ .+.++.-......|.+.++..++.... + ++++
T Consensus 57 pli~~~l~~l~~~----g-~~~i~vv~~~~~~~i~~~~----~~~-~~~iv~~~~~~~~g~~~al~~a~~~~~-~-~lv~ 124 (254)
T 1jyk_A 57 PLIEYQIEFLKEK----G-INDIIIIVGYLKEQFDYLK----EKY-GVRLVFNDKYADYNNFYSLYLVKEELA-N-SYVI 124 (254)
T ss_dssp EHHHHHHHHHHHT----T-CCCEEEEECTTGGGGTHHH----HHH-CCEEEECTTTTTSCTHHHHHTTGGGCT-T-EEEE
T ss_pred EHHHHHHHHHHHC----C-CCeEEEEeCCcHHHHHHHH----HhC-CcEEEECCCccCCCcHHHHHHHHHHCC-C-EEEE
Confidence 4455555555432 1 1256666543333333322 222 234443222224566777777776653 4 6689
Q ss_pred eCCCCCCCccHHHH
Q psy3650 293 DADLSHHPKFIPEM 306 (435)
Q Consensus 293 d~D~~~~~~~l~~~ 306 (435)
.+|..+..+.+..+
T Consensus 125 ~~D~~~~~~~~~~~ 138 (254)
T 1jyk_A 125 DADNYLFKNMFRND 138 (254)
T ss_dssp ETTEEESSCCCCSC
T ss_pred eCCcccCHHHHHHH
Confidence 99987655655443
No 146
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=35.11 E-value=73 Score=26.83 Aligned_cols=52 Identities=19% Similarity=0.339 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHHHhhc---cCCEEEEEeCCCC-CCCccHHHHHHHHhcCCCceEEeee
Q psy3650 269 KKLGLGTAYMHGLKYA---TGNFIIIMDADLS-HHPKFIPEMIKLQQQENLDVVTGTR 322 (435)
Q Consensus 269 ~n~g~~~a~n~g~~~a---~~d~v~~~d~D~~-~~~~~l~~~~~~~~~~~~~~v~~~~ 322 (435)
...|.+..+..|+..+ ..+-++++-+|.- ++++.|.+++..+.+ .++|.|+.
T Consensus 83 ~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~--~d~VigPa 138 (242)
T 3cgx_A 83 QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH--YDAAIGPA 138 (242)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT--CSEEEEEB
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc--CCeEEEEc
Confidence 3558999999999976 3478999999995 999999999988754 56777753
No 147
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=33.60 E-value=1.6e+02 Score=27.74 Aligned_cols=113 Identities=11% Similarity=0.106 Sum_probs=59.1
Q ss_pred EeccCCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCc-chHHHHHHHHHHhCCceEEEecC-----------------
Q psy3650 206 LPTYNEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPD-GTLDAAKQLQSIYGSEKIVLKPR----------------- 267 (435)
Q Consensus 206 ip~~n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d-~t~~~~~~~~~~~~~~~i~~~~~----------------- 267 (435)
+|+.+....++..++.+.+.-......+.++++..+.+. .+.+.+++. .+-++++.++..
T Consensus 102 lpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~--~~fG~~I~~f~Q~~~P~i~~e~~~~l~~~ 179 (469)
T 2icy_A 102 IEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKY--TNSNVDIHTFNQSKYPRVVADEFVPWPSK 179 (469)
T ss_dssp SEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGG--TTSSSCEEEEECCCEECEETTTTEEGGGG
T ss_pred cccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhc--ccCCceEEEEEecceeeEccccCccccCC
Confidence 344456667777777776642211234567777666443 344444331 112335554311
Q ss_pred -------CCCCCHHHHHHH----HH-hh--cc-CCEEEEEeCCCCCCCccHHHHHHHHhcCCCceEEee
Q psy3650 268 -------KKKLGLGTAYMH----GL-KY--AT-GNFIIIMDADLSHHPKFIPEMIKLQQQENLDVVTGT 321 (435)
Q Consensus 268 -------~~n~g~~~a~n~----g~-~~--a~-~d~v~~~d~D~~~~~~~l~~~~~~~~~~~~~~v~~~ 321 (435)
....|.|.++.. |+ +. .. .++++++++|+....... .++.++.+.++++....
T Consensus 180 ~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~-~ll~~~~~~~a~~t~~v 247 (469)
T 2icy_A 180 GKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDL-TILKHLIQNKNEYCMEV 247 (469)
T ss_dssp TCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCH-HHHHHHHHHTCSEEEEE
T ss_pred CCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCH-HHHHHHHHcCCCeeEEE
Confidence 134455555443 22 21 23 499999999996543333 56666655555555543
No 148
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=33.51 E-value=37 Score=30.88 Aligned_cols=45 Identities=9% Similarity=0.163 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHHhhccCCEEEEEcCCC-CCCCCcHHHHHHHHhcCC
Q psy3650 45 KLGLGTAYMHGLKYATGNFIIIMDADL-SHHPKFIPEMIKLQQQEN 89 (435)
Q Consensus 45 n~g~~~a~n~gl~~a~gd~i~~lD~D~-~~~~~~l~~~~~~~~~~~ 89 (435)
..|...+...|++....|+++++++|. .++++.+..+++.+.+.+
T Consensus 73 g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~~~ 118 (371)
T 1w55_A 73 GDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKAD 118 (371)
T ss_dssp CSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGCS
T ss_pred CCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHhcC
Confidence 456778888999888789999999999 568889999998775543
No 149
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=33.44 E-value=83 Score=26.63 Aligned_cols=71 Identities=14% Similarity=0.073 Sum_probs=42.5
Q ss_pred eEEEEEeCCCCcChHHHHHHHHHHh--CCceEEEccCCCCCCHHHHHHHHHhhc------cCCEEEEEcCCCCCCCCcHH
Q psy3650 8 YEIIVIDDGSPDGTLDAAKQLQSIY--GSEKIVLKPRKKKLGLGTAYMHGLKYA------TGNFIIIMDADLSHHPKFIP 79 (435)
Q Consensus 8 ~EiivvDd~S~d~t~~i~~~~~~~~--~~~~i~~~~~~~n~g~~~a~n~gl~~a------~gd~i~~lD~D~~~~~~~l~ 79 (435)
-+|+||-....+ ..+.+++...+. +...+.+. .+...|.+.+...|+... ..+-++++.+|..+.+..+.
T Consensus 47 ~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~ 124 (255)
T 4evw_A 47 TPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAEL-HTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFP 124 (255)
T ss_dssp SCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEE-SSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCC
T ss_pred ceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEe-CCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhH
Confidence 455555433333 445555443333 22234443 456779999999998877 24668889999977554444
Q ss_pred H
Q psy3650 80 E 80 (435)
Q Consensus 80 ~ 80 (435)
.
T Consensus 125 ~ 125 (255)
T 4evw_A 125 D 125 (255)
T ss_dssp G
T ss_pred H
Confidence 3
No 150
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=33.41 E-value=54 Score=27.10 Aligned_cols=94 Identities=5% Similarity=0.095 Sum_probs=54.2
Q ss_pred CCCCChHHHHHHHHHHhhcCCCCeEEEEEeCCCCcchHHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhc---cC
Q psy3650 210 NEKENLPIIVYLITKYMDEGNYPYEIIVIDDGSPDGTLDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYA---TG 286 (435)
Q Consensus 210 n~~~~l~~~l~~l~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a---~~ 286 (435)
+....+..+++.+.+. ...-+|+|+-+... .+.++++.. .. ..+... ....+...++..|++.+ ..
T Consensus 39 ~Gkpli~~~i~~l~~~----~~~~~ivVv~~~~~---~~~~~~~~~-~~-~~~~~~--~gg~~~~~sv~~al~~~~~~~~ 107 (234)
T 1vpa_A 39 EGRMLFEYPLSTFLKS----EAIDGVVIVTRREW---FEVVEKRVF-HE-KVLGIV--EGGDTRSQSVRSALEFLEKFSP 107 (234)
T ss_dssp TTEETTHHHHHHHHHC----TTCSEEEEEECGGG---HHHHHTTCC-CT-TEEEEE--ECCSSHHHHHHHHHHHHGGGCC
T ss_pred CCeEHHHHHHHHHHcC----CCCCeEEEEEChHH---HHHHHHHhc-cC-CceEEe--CCCCcHHHHHHHHHHHhhhcCC
Confidence 3456677777776542 11227777764322 122222211 11 122221 11223566777888766 36
Q ss_pred CEEEEEeCCCC-CCCccHHHHHHHHhcCC
Q psy3650 287 NFIIIMDADLS-HHPKFIPEMIKLQQQEN 314 (435)
Q Consensus 287 d~v~~~d~D~~-~~~~~l~~~~~~~~~~~ 314 (435)
++++++++|.- ++++.+..+++.+.+.+
T Consensus 108 ~~vlv~~~D~Pli~~~~i~~l~~~~~~~~ 136 (234)
T 1vpa_A 108 SYVLVHDSARPFLRKKHVSEVLRRARETG 136 (234)
T ss_dssp SEEEEEETTSCCCCHHHHHHHHHHHHHHS
T ss_pred CEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 89999999984 78999999998775433
No 151
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=25.65 E-value=1.2e+02 Score=26.84 Aligned_cols=55 Identities=18% Similarity=0.116 Sum_probs=34.0
Q ss_pred CCCCCCHHHHHHHHHhhcc-CCEEEEEcCCCCCC-CCcHHHHHHH----HhcCCCcEEEEe
Q psy3650 42 RKKKLGLGTAYMHGLKYAT-GNFIIIMDADLSHH-PKFIPEMIKL----QQQENLDVVTGT 96 (435)
Q Consensus 42 ~~~n~g~~~a~n~gl~~a~-gd~i~~lD~D~~~~-~~~l~~~~~~----~~~~~~~~v~g~ 96 (435)
.+..+|.+.+.-.+..... .++++++.+|..+. ++.+..+++. ..+.+..+++|.
T Consensus 80 e~~~~gta~ai~~a~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i 140 (336)
T 2x65_A 80 EPMKKNTAPACFIGTKLADDDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGI 140 (336)
T ss_dssp ESSCCCHHHHHHHHHTTSCTTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCCCcHHHHHHHHHhhCCCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 3455688887776666543 47899999999664 4455444443 333355555554
No 152
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=24.16 E-value=1.1e+02 Score=24.57 Aligned_cols=48 Identities=17% Similarity=0.330 Sum_probs=31.7
Q ss_pred CCeEEEEEeCCCCcChHHHHHHHH-HHhCCceEEEccCCCCCCHHHHHH
Q psy3650 6 YPYEIIVIDDGSPDGTLDAAKQLQ-SIYGSEKIVLKPRKKKLGLGTAYM 53 (435)
Q Consensus 6 ~~~EiivvDd~S~d~t~~i~~~~~-~~~~~~~i~~~~~~~n~g~~~a~n 53 (435)
-|-.++|||+++.-...|.+.=+. ++..+.+++.+......|.+.|+-
T Consensus 120 tp~s~lIVD~AekLS~kE~~~Lld~A~~~naqvvll~~~~RqG~GnAl~ 168 (189)
T 2l8b_A 120 TPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALM 168 (189)
T ss_dssp CCCCEEEEEESSSHHHHHHHHHHHHHHHTTCCEEEEESSTTTCSHHHHH
T ss_pred CCCCEEEEechhhcCHHHHHHHHHHHHhcCCEEEEeCCcccccCCCHHH
Confidence 356799999999876555544221 233567888887777777755543
No 153
>4gqo_A LMO0859 protein; virulence, pathogenesis, vaccine candidate, center for struc genomics of infectious diseases, csgid, niaid; HET: MSE PGE; 2.10A {Listeria monocytogenes}
Probab=22.86 E-value=2.3e+02 Score=25.69 Aligned_cols=135 Identities=10% Similarity=0.011 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCceEEEecCCCCCCHHHHHHHHHhhccC-CEEEEEe---------CCCCCCCccHHHHHHHHhcCCCc
Q psy3650 247 LDAAKQLQSIYGSEKIVLKPRKKKLGLGTAYMHGLKYATG-NFIIIMD---------ADLSHHPKFIPEMIKLQQQENLD 316 (435)
Q Consensus 247 ~~~~~~~~~~~~~~~i~~~~~~~n~g~~~a~n~g~~~a~~-d~v~~~d---------~D~~~~~~~l~~~~~~~~~~~~~ 316 (435)
.++++++.+++|+++|.+...+..-.....++.++..-.. |++..++ .+...+-+.+...-.........
T Consensus 47 ~~~i~~F~~~~p~i~V~~~~~~~~~~~~~kl~~~~asg~~PDv~~~~~~~~~~~~~~~g~l~~L~~~~~~~~~~~~~~~~ 126 (433)
T 4gqo_A 47 DEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMS 126 (433)
T ss_dssp HHHHHHHHHHCTTEEEEEEECCCSSSHHHHHHHHHHHTCCCSEEEEECHHHHHHHHHTTSBCCGGGSTTHHHHHHHTTCH
T ss_pred HHHHHHHHHHCcCeEEEEEEcCCcHHHHHHHHHHHHCCCCCeEEEEcCHHHHHHHHHCCCEEEChhhhcccchhhhhhhH
Q ss_pred eEEeeeEECCCceeccchhHHHHHHHHHHHHHHhcCCCccccccceeeecHHHHHHhhhcccCcccchhhHHHHHHHHCC
Q psy3650 317 VVTGTRYVGTGGVYGWDFKRKLVSRGANYLTQLLLRPGVSDLTGSFRLYKKQVLENLVSSCVSKGYVFQMEMVIRARQYN 396 (435)
Q Consensus 317 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~D~el~lr~~~~G 396 (435)
-..-.....++...+.|+. .....+.+++++|++.|.......+.+=.+++-++.+.|
T Consensus 127 ~~~~~~~~~dGk~y~~P~~----------------------~~~~~l~Ynkdlf~~aGl~~pP~Twde~~~~~~~l~~~~ 184 (433)
T 4gqo_A 127 ETMDSWKFSDGNQYVLPVY----------------------SNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKY 184 (433)
T ss_dssp HHHHHTCCTTSCCCCEEEE----------------------EEECEEEECHHHHHHTTCSSCCCBHHHHHHHHHHHHHHC
T ss_pred HHHHHhcccCCEEEEEecc----------------------CceEEEEEehhhHHHcCCCCCCCCHHHHHHHHHHHHHhC
Q ss_pred CcEEEee
Q psy3650 397 YTIGEVP 403 (435)
Q Consensus 397 ~~i~~~p 403 (435)
..-....
T Consensus 185 ~~~~~~~ 191 (433)
T 4gqo_A 185 PDKVLWA 191 (433)
T ss_dssp TTCEEEE
T ss_pred CCCceec
No 154
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=20.17 E-value=3e+02 Score=24.34 Aligned_cols=17 Identities=24% Similarity=0.130 Sum_probs=13.2
Q ss_pred cCCEEEEEeCCCCCCCc
Q psy3650 285 TGNFIIIMDADLSHHPK 301 (435)
Q Consensus 285 ~~d~v~~~d~D~~~~~~ 301 (435)
..|-|+++|+|..+-.+
T Consensus 94 ~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 94 QYSKCVFMDADTLVLAN 110 (333)
T ss_dssp TCSEEEEECTTEEECSC
T ss_pred CCCeEEEEeCCEEeccC
Confidence 45899999999875443
Done!