BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3652
(394 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 267 bits (682), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/259 (54%), Positives = 167/259 (64%), Gaps = 59/259 (22%)
Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRC-TTTRRLF-- 251
+V + VQ RFG+ LLELGGNNAIIV EDADLNL VFA GTAGQRC TT R +
Sbjct: 252 MVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHE 311
Query: 252 -------------------------------LHKKK------------------------ 256
LH K+
Sbjct: 312 SVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGK 371
Query: 257 -IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
+DRPG +VEPTI+TGL H++ +VH ETF PI+YV F + +EA WNNEV+QGLSSSIF
Sbjct: 372 VMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIF 431
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRS 375
TKD+ +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSDSWKQY RRS
Sbjct: 432 TKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMRRS 491
Query: 376 TVTINHGKEITLAQGIKFE 394
T TIN+ K++ LAQGIKFE
Sbjct: 492 TCTINYSKDLPLAQGIKFE 510
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
Query: 22 KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS 81
KY +LKELGLS NPGVY+G SW +GE+I S P+ E IA V Q + +Y ++ +
Sbjct: 9 KYSWLKELGLSED-NPGVYNG-SWGGSGEVITSYCPANNEPIARVTQATLAEYEETVQKT 66
Query: 82 RXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD 141
R P+RGEIVRQIGDALR K+ LG LVSLEMGKI EG+GEVQE++D+CD
Sbjct: 67 REAWKMWADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCD 126
Query: 142 YAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
YAVGLSR G +LPSERPGH L+E WNP+G+VGII+AFNFPVAVYGWN AIAL
Sbjct: 127 YAVGLSRMIGGPVLPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAL 180
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/245 (51%), Positives = 150/245 (61%), Gaps = 59/245 (24%)
Query: 196 VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
VG+ VQ RFG+ LLELGGNNAII EDADL+L +FA GTAGQRCTT RRLF+H+
Sbjct: 255 VGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 314
Query: 256 KID-------------RPGYFVEPTIVTG------------------------------- 271
D R G +P ++ G
Sbjct: 315 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV 374
Query: 272 ---------------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFT 316
L H++ + H ETFAPI+YVF F + +E WNNEVKQGLSSSIFT
Sbjct: 375 MDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFT 434
Query: 317 KDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
KD+ +F+WLGP+GSDCG++NVNIPT+GAEIGGAFGGEK+TGGGRESGSD+WKQY RRST
Sbjct: 435 KDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494
Query: 377 VTINH 381
TIN+
Sbjct: 495 CTINY 499
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 22 KYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS 81
+Y +LKELGL N GVY+G SW GE+I + P+ E IA V+Q +V DY ++ +
Sbjct: 11 QYAWLKELGLR-EENEGVYNG-SWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKA 68
Query: 82 RXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICD 141
R P+RGEIVRQIGDALR K+ LG LVSLEMGKIL EG+GEVQE++DICD
Sbjct: 69 REAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICD 128
Query: 142 YAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
YAVGLSR G ILPSER GH L+E WNP+G+VGII+AFNFPVAVYGWN AIA++
Sbjct: 129 YAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI 183
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 169/479 (35%), Gaps = 143/479 (29%)
Query: 39 VYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXX---XXX 93
++ W+ +G + P NP+TGE + VQ+ + D + ++++R
Sbjct: 21 IFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDA 80
Query: 94 PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSR---- 148
RG ++ ++ D + L + SL GK + ++Q I Y G +
Sbjct: 81 SERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHG 140
Query: 149 ----------TYS--------GSILPSERPGHVLLENWN-------------------PL 171
T++ G I+P P +L+ W PL
Sbjct: 141 MTIPVDGDYFTFTRHEPIGVCGQIIPWNFP--LLMFTWKIAPALCCGNTVVIKPAEQTPL 198
Query: 172 GVV---GIISAFNFPVAV------YGWNAAIAL----------------VGVAVQ----- 201
+ +I FP V YG A A+ VG +Q
Sbjct: 199 SALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGR 258
Query: 202 SRFGKLLLELGGNNAIIVNEDADLNLA----QQCLVF---ACCGTAGQRC---------- 244
S ++ LELGG + I+ DADL+ A Q + F CC TAG R
Sbjct: 259 SNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCC-TAGSRIFVEESIYEEF 317
Query: 245 -------------------TTTRRLFLHKKKID------------------------RPG 261
TT + + KK+ + R G
Sbjct: 318 VKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKG 377
Query: 262 YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN 321
+F+EPT+ + + + R+ E F P+ + F ++DE I N GL +++FT D+
Sbjct: 378 FFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINK 437
Query: 322 LFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ G + +N N FGG K +G GRE G ++Y TVT+
Sbjct: 438 AL--MVSSAMQAGTVWINC-YNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVK 493
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 35 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
+ L L +L+ GK + + ++ + Y G + Y G
Sbjct: 95 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
I+P P +L++ W L V +I
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
FP V +G A A+ +G +Q S ++ LELGG
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
+ I+ DAD++ A + FA C AG R ++
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
KKI DR GYF++PT+ +
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
+ E F P++ + F +++E + N GL++++FTKD+ +L Q G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ VN GA+ FGG K +G GRE G + Y TVT+
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47 ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
++G +INP+ GE +A VQ+ + +D R ++S+ +R I+R+ D
Sbjct: 19 SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 78
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
LR + L L +L+ GK LAE ++ D+ +Y GL G +P V
Sbjct: 79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 138
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
PLGVV I A+N+PV + W +A AL
Sbjct: 139 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 169
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G +V PT+ T + +V E F P++ + +D DEAI N+ + GL++ + T+D+
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
+ + + G+ +N + AE+ GG K +G GRE+G + Y R +V +
Sbjct: 426 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481
Query: 380 NHG 382
G
Sbjct: 482 ELG 484
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
++ A S ++ +ELGG + +I+ DADL+ A V A ++GQ CT R+F+H+
Sbjct: 237 VMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHR 296
Query: 255 KKIDR 259
+ R
Sbjct: 297 SQQAR 301
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47 ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
++G +INP+ GE +A VQ+ + +D R ++S+ +R I+R+ D
Sbjct: 18 SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 77
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
LR + L L +L+ GK LAE ++ D+ +Y GL G +P V
Sbjct: 78 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 137
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
PLGVV I A+N+PV + W +A AL
Sbjct: 138 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 168
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G +V PT+ T + +V E F P++ + +D DEAI N+ + GL++ + T+D+
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 424
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
+ + + G+ +N + AE+ GG K +G GRE+G + Y R +V +
Sbjct: 425 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 480
Query: 380 NHG 382
G
Sbjct: 481 ELG 483
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
++ A S ++ +ELGG + +I+ DADL+ A V A ++GQ CT R+F+H+
Sbjct: 236 VMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHR 295
Query: 255 KKIDR 259
+ R
Sbjct: 296 SQQAR 300
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47 ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
++G +INP+ GE +A VQ+ + +D R ++S+ +R I+R+ D
Sbjct: 18 SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 77
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
LR + L L +L+ GK LAE ++ D+ +Y GL G +P V
Sbjct: 78 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 137
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
PLGVV I A+N+PV + W +A AL
Sbjct: 138 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 168
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G +V PT+ T + +V E F P++ + +D DEAI N+ + GL++ + T+D+
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 424
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
+ + + G+ +N + AE+ GG K +G GRE+G + Y R +V +
Sbjct: 425 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 480
Query: 380 NHG 382
G
Sbjct: 481 ELG 483
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
++ A S ++ + LGG + +I+ DADL+ A V A ++GQ CT R+F+H+
Sbjct: 236 VMASASSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHR 295
Query: 255 KKIDR 259
+ R
Sbjct: 296 SQQAR 300
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47 ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
++G +INP+ GE +A VQ+ + +D R ++S+ +R I+R+ D
Sbjct: 19 SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 78
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
LR + L L +L+ GK LAE ++ D+ +Y GL G +P V
Sbjct: 79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 138
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
PLGVV I A+N+PV + W +A AL
Sbjct: 139 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 169
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G +V PT+ T + +V E F P++ + +D DEAI N+ + GL++ + T+D+
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
+ + + G+ +N + AE+ GG K +G GRE+G + Y R +V +
Sbjct: 426 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481
Query: 380 NHG 382
G
Sbjct: 482 ELG 484
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
++ A S ++ +ELGG + +I+ DADL+ A V A ++GQ T R+F+H+
Sbjct: 237 VMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHR 296
Query: 255 KKIDR 259
+ R
Sbjct: 297 SQQAR 301
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 35 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
+ L L +L+ GK + + ++ + Y G + Y G
Sbjct: 95 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
I+P P +L++ W L V +I
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
FP V +G A A+ +G +Q S ++ LELGG
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
+ I+ DAD++ A + FA C AG R ++
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
KKI DR GYF++PT+ +
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
+ E F P++ + F +++E + N GL++++FTKD+ +L Q G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ VN GA+ FGG K +G GRE G + Y TVT+
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 47 ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
++G +INP+ GE +A VQ+ + +D R ++S+ +R I+R+ D
Sbjct: 19 SSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDI 78
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
LR + L L +L+ GK LAE ++ D+ +Y GL G +P V
Sbjct: 79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYT 138
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
PLGVV I A+N+PV + W +A AL
Sbjct: 139 RR-EPLGVVAGIGAWNYPVQIALWKSAPALAA 169
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G +V PT+ T + +V E F P++ + +D DEAI N+ + GL++ + T+D+
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 321 NLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
+ + + G+ +N + AE+ GG K +G GRE+G + Y R +V +
Sbjct: 426 RAHRAI--HRLEAGICWINTWGESPAEM--PVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481
Query: 380 NHG 382
G
Sbjct: 482 ELG 484
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 195 LVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
++ A S ++ +ELGG + +I+ DADL+ A V A ++GQ T R+F+H+
Sbjct: 237 VMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHR 296
Query: 255 KKIDR 259
+ R
Sbjct: 297 SQQAR 301
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 35 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
+ L L +L+ GK + + ++ + Y G + Y G
Sbjct: 95 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
I+P P +L++ W L V +I
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
FP V +G A A+ +G +Q S ++ LELGG
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
+ I+ DAD++ A + FA C AG R ++
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
KKI DR GYF++PT+ +
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
+ E F P++ + F +++E + N GL++++FTKD+ +L Q G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ VN GA+ FGG K +G GRE G + Y TVT+
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 35 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
+ L L +L+ GK + + ++ + Y G + Y G
Sbjct: 95 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
I+P P +L++ W L V +I
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
FP V +G A A+ +G +Q S ++ LELGG
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
+ I+ DAD++ A + FA C AG R ++
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
KKI DR GYF++PT+ +
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
+ E F P++ + F +++E + N GL++++FTKD+ +L Q G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ VN GA+ FGG K +G GRE G + Y TVT+
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G+F +PT+V G +V RE F P+V V F D+A+ W N+ GL+SS++TKD++
Sbjct: 380 GFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDIS 439
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ C IN + GG K +G G++ + + Y + IN
Sbjct: 440 KAXRAASRLQYGCTWINTHFXLTNEX---PHGGIKQSGYGKDXSVYALEDYTAVRHIXIN 496
Query: 381 HG 382
HG
Sbjct: 497 HG 498
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
Query: 55 INPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPL 114
+NP TG I + + + ++++ R + +I DA+ +
Sbjct: 45 LNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEF 104
Query: 115 GQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGV 173
L +L GK I A E+ ID + G R PGH +P+G+
Sbjct: 105 AALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSXIRRDPIGI 164
Query: 174 VGIISAFNFPVAVYGWNAAIALVG 197
VG I+ +N+P+ W A A+ G
Sbjct: 165 VGSIAPWNYPLXXXAWKLAPAIGG 188
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 164/467 (35%), Gaps = 143/467 (30%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 35 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
+ L L +L+ GK + + ++ + Y G + Y G
Sbjct: 95 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
I+P P +L++ W L V +I
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
FP V +G A A+ +G +Q S ++ LELGG
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
+ I+ DAD++ A + FA C AG R ++
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
KKI DR GYF++PT+ +
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
+ E F P++ + F +++E + N GL++++FTKD+ +L Q G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ VN GA+ FGG K +G G+E G + Y TVT+
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGQELGEYGLQAYTEVKTVTVK 494
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 160/458 (34%), Gaps = 143/458 (31%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 35 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
+ L L +L+ GK + + ++ + Y G + Y G
Sbjct: 95 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
I+P P +L++ W L V +I
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
FP V +G A A+ +G +Q S ++ LELGG
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
+ I+ DAD++ A + FA C AG R ++
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
KKI DR GYF++PT+ +
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
+ E F P++ + F +++E + N GL++++FTKD+ +L Q G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
+ VN GA+ FGG K +G GRE G + Y
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAY 485
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 160/458 (34%), Gaps = 143/458 (31%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 35 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGS------------ 153
+ L L +L+ GK + + ++ + Y G + Y G
Sbjct: 95 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 154 ----------ILPSERPGHVLLENWN----------------------PLGVVGIISAFN 181
I+P P +L++ W L V +I
Sbjct: 155 RHEPVGVCGQIIPWNFP--LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAG 212
Query: 182 FPVAV------YGWNAAIAL----------------VGVAVQ-----SRFGKLLLELGGN 214
FP V +G A A+ +G +Q S ++ LELGG
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 215 NAIIVNEDADLNLAQQCLVFAC------CGTAGQRCTTTRRLF----------------- 251
+ I+ DAD++ A + FA C AG R ++
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 252 ---------------LHKKKI----------------------DRPGYFVEPTIVTGLPH 274
KKI DR GYF++PT+ +
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR-GYFIQPTVFGDVQD 391
Query: 275 NSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCG 334
+ E F P++ + F +++E + N GL++++FTKD+ +L Q G
Sbjct: 392 GMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKA-NYLS-QALQAG 449
Query: 335 LINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
+ VN GA+ FGG K +G GRE G + Y
Sbjct: 450 TVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAY 485
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 97/275 (35%), Gaps = 81/275 (29%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVP 113
S+NP+TG+T+A+ N Q+ + + +R + +R IG ALR
Sbjct: 11 SVNPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEE 70
Query: 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN------ 167
Q ++ E GK + + EV + +CD+ Y+ P L+EN
Sbjct: 71 XAQCITREXGKPIKQARAEVTKSAALCDW-------YAEHGPAXLNPEPTLVENQQAVIE 123
Query: 168 WNPLGVVGIISAFNF-------------------------------------------PV 184
+ PLGV+ I +NF P
Sbjct: 124 YRPLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPA 183
Query: 185 AVYGWNAA-------------IALVGVAVQSR------------FGKLLLELGGNNAIIV 219
VYGW A IA V V R K +LELGG++ IV
Sbjct: 184 GVYGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243
Query: 220 NEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
DADL LA + V GQ C +R + +
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEE 278
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
RL L +KI G + T++ + + +E F P+ + A+ N+ +
Sbjct: 332 RLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSEF 391
Query: 309 GLSSSIFTKDVTNLFKWLGPQGS---DCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGS 365
GLS++IFT D T L + + +CG + +N + ++ AFGG K +G GRE
Sbjct: 392 GLSATIFTADDT-----LAAEXAARLECGGVFIN-GYSASDARVAFGGVKKSGFGRELSH 445
Query: 366 DSWKQYCRRSTVTINH 381
++C TV N
Sbjct: 446 FGLHEFCNVQTVWKNR 461
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
GY+ PT++ G + +V +E F P+V V PFD+ ++ + W N+ + GL+SS++TKDV
Sbjct: 378 GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVG 437
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ C +N + +E+ GG+K +G G++ + Y V +
Sbjct: 438 RAHRVSARLQYGCTWVNTHFMLV-SEM--PHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494
Query: 381 H 381
H
Sbjct: 495 H 495
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 1/151 (0%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
GE P NP+TG+ + + + + + + ++ R E + ++ D +
Sbjct: 36 EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVI 95
Query: 108 RHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
+L S GK L E+ +D+ + G +R +G GH +
Sbjct: 96 EENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMI 155
Query: 167 NWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
+PLGVV I+ +N+P+ + W A AL
Sbjct: 156 RRDPLGVVASIAPWNYPLMMAAWKLAPALAA 186
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 64/241 (26%)
Query: 202 SRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF---------- 251
S K+ LELGG + +I+ D DLN A Q + + G+ C RLF
Sbjct: 280 SNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFV 339
Query: 252 ------LHKKKIDRP-------------------------------------------GY 262
+ K KI P G+
Sbjct: 340 QKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGF 399
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
F +PT+ T + + + E+F PI+ + F +D ++ N + GL+S +FT+D+
Sbjct: 400 FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN 459
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ IN N ++ FGG K +G G++ G + +Y R TVT
Sbjct: 460 KALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516
Query: 381 H 381
+
Sbjct: 517 Y 517
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXPRRGEIVRQIGDALRHKL 111
+INP+ G I V V D + + +++ RG ++ ++ D +
Sbjct: 56 TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115
Query: 112 VPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILP--SERPGHVL-LEN 167
L + +L+ G + + V I Y G G+ +P RP L L
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
P+GV GI+ +N+P+ + W A L
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
DR GYF++PT+ L + E F P++ + F S++E + N K GL++++FTK
Sbjct: 375 DR-GYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTK 433
Query: 318 DVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
D+ +L Q G + VN GA+ FGG K +G GRE G + Y T
Sbjct: 434 DLDKA-NYLS-QALQAGTVWVNCYDVFGAQ--SPFGGYKLSGSGRELGEYGLQAYTEVKT 489
Query: 377 VTI 379
VT+
Sbjct: 490 VTV 492
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTG+ I V +G+ D R ++++R RG ++ ++ D
Sbjct: 34 KTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADL 93
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
+ L L +L+ GK + + ++ + Y G + Y G +P + +
Sbjct: 94 IERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDG-DYFSY 152
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
P+GV G I +NFP+ + W AL
Sbjct: 153 TRHEPVGVCGQIIPWNFPLLMQAWKLGPAL 182
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 83/214 (38%), Gaps = 58/214 (27%)
Query: 204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRL------------- 250
F ++ LELGGNN V DAD++ A +F GQ C R+
Sbjct: 247 FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEK 306
Query: 251 ----------------------FLHKKKID---------------------RPGYFVEPT 267
+++++I+ R G + P
Sbjct: 307 FTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPY 366
Query: 268 IVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLG 327
+ G +NS++ E FAPI + S EAI N+ + GLSS++FT D+ K+
Sbjct: 367 VFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF-- 424
Query: 328 PQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGR 361
D G+ +VN + AFGG K +G GR
Sbjct: 425 ALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGR 458
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 117 LVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSI-----LPSERPGHVLLENWNPL 171
+++ E G + + E+++ I I D A+ TY+G + +PS+ G PL
Sbjct: 89 MIARETGGTIIKSTIELEQTIAILDEAM----TYTGELGGVKEVPSDIEGKTNKIYRLPL 144
Query: 172 GVVGIISAFNFPV 184
GV+ IS FNFP+
Sbjct: 145 GVISSISPFNFPM 157
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
++ RPG+F +PT+ T + + + E+F PI+ + F +D ++ N + GL+S
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
+FT+D+ + IN N ++ FGG K +G G++ G + +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
TVT +
Sbjct: 510 IKTVTFEY 517
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXPRRGEIVRQIGDALRHKL 111
+INP+ G I V V D + + +++ RG ++ ++ D +
Sbjct: 56 TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115
Query: 112 VPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILP--SERPGHVL-LEN 167
L + +L+ G + + V I Y G G+ +P RP L L
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
P+GV GI+ +N+P+ + W A L
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
++ RPG+F +PT+ T + + + E+F PI+ + F +D ++ N + GL+S
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
+FT+D+ + IN N ++ FGG K +G G++ G + +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
TVT +
Sbjct: 510 IKTVTFEY 517
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXPRRGEIVRQIGDALRHKL 111
+INP+ G I V V D + + +++ RG ++ ++ D +
Sbjct: 56 TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115
Query: 112 VPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILP--SERPGHVL-LEN 167
L + +L+ G + + V I Y G G+ +P RP L L
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
P+GV GI+ +N+P+ + W A L
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
++ RPG+F +PT+ T + + + E+F PI+ + F +D ++ N + GL+S
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
+FT+D+ + IN N ++ FGG K +G G++ G + +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
TVT +
Sbjct: 510 IKTVTFEY 517
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXPRRGEIVRQIGDALRHKL 111
+INP+ G I V V D + + +++ RG ++ ++ D +
Sbjct: 56 TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115
Query: 112 VPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILP--SERPGHVL-LEN 167
L + +L+ G + + V I Y G G+ +P RP L L
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
P+GV GI+ +N+P+ + W A L
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
++ RPG+F +PT+ T + + + E+F PI+ + F +D ++ N + GL+S
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
+FT+D+ + IN N ++ FGG K +G G++ G + +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
TVT +
Sbjct: 510 IKTVTFEY 517
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXPRRGEIVRQIGDALRHKL 111
+INP+ G I V V D + + +++ RG ++ ++ D +
Sbjct: 56 TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115
Query: 112 VPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILP--SERPGHVL-LEN 167
L + +L+ G + + V I Y G G+ +P RP L L
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
P+GV GI+ +N+P+ + W A L
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYV--FPFDSLDEAITWNNEVKQGLSSS 313
++ RPG+F +PT+ T + + + E+F PI+ + F +D ++ N + GL+S
Sbjct: 393 QVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCR 373
+FT+D+ + IN N ++ FGG K +G G++ G + +Y R
Sbjct: 453 VFTRDINKALYVSDKLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 509
Query: 374 RSTVTINH 381
TVT +
Sbjct: 510 IKTVTFEY 517
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXPRRGEIVRQIGDALRHKL 111
+INP+ G I V V D + + +++ RG ++ ++ D +
Sbjct: 56 TINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115
Query: 112 VPLGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILP--SERPGHVL-LEN 167
L + +L+ G + + V I Y G G+ +P RP L L
Sbjct: 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTK 175
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
P+GV GI+ +N+P+ + W A L
Sbjct: 176 KEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
GYF++PT+ + + + R+ E F P+ + F SLD+ I N GLS+ IFT D+
Sbjct: 379 GYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDID 438
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
S +N + FGG K +G GRE G + +Y TVTI
Sbjct: 439 KAITVSSALQSGTVWVNCYSVVSAQ---CPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIG 104
+G+ P NP+T E + V++G+ +D + ++++R RG ++ ++
Sbjct: 34 SGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLA 93
Query: 105 DALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHV 163
D + + L + ++ GK+ + + ++ I Y G + G +P +
Sbjct: 94 DLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFT 153
Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
+ P+GV G I +NFP+ ++ W AL
Sbjct: 154 YTRS-EPVGVCGQIIPWNFPLLMFLWKIGPAL 184
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 61/227 (26%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCG------TAGQRCTTTRRLF--- 251
Q+ +++ E+GG + ++V+ED D+ LA Q + + G +AG R +++
Sbjct: 278 QTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEV 337
Query: 252 -------LHKKKIDRP------------------------------------------GY 262
KK+ P GY
Sbjct: 338 LKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGY 397
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
F+EPTI L +R++ E F P+V S DEA+ N + GL+ ++ TK+ ++
Sbjct: 398 FIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHI 457
Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGSDSW 368
+ Q G + N GA +G FGG K +G ++G +
Sbjct: 458 NR--AKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDY 502
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
R+ L K ++ GY+ PT++ + ++H ETF P++ V FD+L+EAI+ N+
Sbjct: 350 RVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDY 409
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
GL+SSI+T+++ K + +G G +N N + G G + +G G G
Sbjct: 410 GLTSSIYTQNLNVAMKAI--KGLKFGETYIN-RENFEAMQGFHAGWRKSGIGGADGKHGL 466
Query: 369 KQYCRRSTVTIN 380
+Y + V +
Sbjct: 467 HEYLQTQVVYLQ 478
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 36 NPGVYDG--TSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXX 93
+P DG +W+ + I +NP+T I+ + G +D + I+++
Sbjct: 7 HPMYIDGQFVTWRGDA-WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPA 65
Query: 94 PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS 153
R +R+I +R + + L+ E GKI EV D DY +R Y G
Sbjct: 66 IERASWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 154 ILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
I+ S+RPG +L LGV I +NFP + A AL+
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALL 168
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
GYF++PT+ + + + R+ E F P+ + F SLDE I N GL + +FTKD+
Sbjct: 379 GYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLD 438
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ +N + + G F K +G GRE G +Y TVT+
Sbjct: 439 KAVTVSSALQAGTVWVNCYLAASAQSPAGGF---KMSGHGREMGEYGIHEYTEVKTVTMK 495
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 99/285 (34%), Gaps = 73/285 (25%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIG 104
+G+ P NP+T E I V++ + +D + ++++R RG+++ ++
Sbjct: 34 SGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLA 93
Query: 105 DALRHKLVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSE----- 158
D + + L L S+ GK+ A + ++ I Y G + G +P +
Sbjct: 94 DLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFS 153
Query: 159 ----RPGHV--LLENWNP-------------------------------LGVVGIISAFN 181
P V L+ WN L V +I
Sbjct: 154 YTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAG 213
Query: 182 FPVAV------YGWNAAIAL----------------VG-----VAVQSRFGKLLLELGGN 214
FP V YG A A+ VG A +S ++ LELG
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAK 273
Query: 215 NAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
N IV DADL+ A + GQ C +LF+ + D
Sbjct: 274 NPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDE 318
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCG------TAGQRCTTTR------ 248
Q+ F + +E GG NAIIV+E AD +LA + +V + G +A R T+
Sbjct: 279 QTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPV 338
Query: 249 ---------------------------------------------RLFLHKKKIDRPGYF 263
+L L K+++ GYF
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYF 398
Query: 264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
+ PT+ T +P +R+ E F P++ V EA+ N+ GL+ ++++ +L
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHL- 457
Query: 324 KWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGS 365
+W + G + N GA +G FGG K +G ++G+
Sbjct: 458 EW-ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 39 VYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRG 97
+Y G W E + S+NPS E + + + + +E++ R
Sbjct: 40 LYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRS 99
Query: 98 EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTY---SGSI 154
++ + +R + L + E+GK E +V E ID +Y + Y + +
Sbjct: 100 RLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEV 159
Query: 155 LPSERPGHVLLENWNPLGVVGIISAFNFPVAVY 187
+P PG + PLG +I+ +NFPVA++
Sbjct: 160 VPY--PGEDNESFYVPLGAGVVIAPWNFPVAIF 190
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
GYF+ P ++ + V E F P++ V PFD+ +E + N GL+S +FT+D++
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438
Query: 321 NLFKWLGPQGSDCGLIN------VNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374
+ + IN V +P FGG K +G GRE+G + Y +
Sbjct: 439 RAHRVAANLEAGTCYINTYSISPVEVP---------FGGYKMSGFGRENGQATVDYYSQL 489
Query: 375 STVTINHG 382
TV + G
Sbjct: 490 KTVIVEMG 497
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Query: 53 PSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLV 112
P P+TG + + ++ + ++S++ R ++ + +R +
Sbjct: 39 PVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD 98
Query: 113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVL-LENWNPL 171
+ +L + GK + E ++ +Y GL+ T SG + + PG PL
Sbjct: 99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHI--QLPGGAFAYTRREPL 156
Query: 172 GVVGIISAFNFPVAVYGWNAAIAL 195
GV I A+N+P + W A AL
Sbjct: 157 GVCAGILAWNYPFMIAAWKCAPAL 180
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
LELGG + +++ +D +L A + + A T GQ CT R+F+ ++
Sbjct: 262 LELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQRE 308
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 36 NPGVYDG--TSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXX 93
+P DG +W+ + I +NP+T I+ + G +D + I+++
Sbjct: 7 HPMYIDGQFVTWRGDA-WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPA 65
Query: 94 PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS 153
R +R+I +R + + L+ E GKI EV D DY +R Y G
Sbjct: 66 IERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 154 ILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
I+ S+RPG +L LGV I +NFP + A AL+
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALL 168
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
R+ K ++ GY+ PT++ + ++H ETF P++ V FD+L++AI+ N+
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
GL+SSI+T+++ K + +G G +N N + G G + +G G G
Sbjct: 410 GLTSSIYTQNLNVAMKAI--KGLKFGETYIN-RENFEAMQGFHAGWRKSGIGGADGKHGL 466
Query: 369 KQYCRRSTVTIN 380
+Y + V +
Sbjct: 467 HEYLQTQVVYLQ 478
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G +V+PT+ + + + E F P++ V FD DE + N + GL+ +FT D+
Sbjct: 371 GAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ + G + G + +N N + FGG K +G GRE+ + + + Y TV ++
Sbjct: 431 RAHRVV--DGLEAGTLWINT-YNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVS 487
Query: 381 HGK-EITLAQGIKFE 394
GK + A+ + F+
Sbjct: 488 TGKVDAPYAENLYFQ 502
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVP 113
SI P+TGE IA + R I S++ RG I+++ D +R +
Sbjct: 34 SIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDA 93
Query: 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSR-TYSGSILPSERPGHVLLENWN--- 169
L L +L+ GK + E I + D G + G I PS G + +
Sbjct: 94 LSTLETLDTGKPIQETI--------VADPTSGADAFEFFGGIAPSALNGDYIPLGGDFAY 145
Query: 170 ----PLGVVGIISAFNFPVAVYGWNAAIALVG 197
PLGV I A+N+P + W AA ALV
Sbjct: 146 TKRVPLGVCVGIGAWNYPQQIACWKAAPALVA 177
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 36 NPGVYDG--TSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXX 93
+P DG +W+ + I +NP+T I+ + G +D + I+++
Sbjct: 7 HPMYIDGQFVTWRGDA-WIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPA 65
Query: 94 PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS 153
R +R+I +R + + L+ E GKI EV D DY +R Y G
Sbjct: 66 IERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 154 ILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
I+ S+RPG +L LGV I +NFP + A AL+
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALL 168
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
R+ K ++ GY+ PT++ + ++H ETF P++ V FD+L++AI+ N+
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDY 409
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
GL+SSI+T+++ K + +G G +N N + G G + +G G G
Sbjct: 410 GLTSSIYTQNLNVAMKAI--KGLKFGETYIN-RENFEAMQGFHAGWRKSGIGGADGKHGL 466
Query: 369 KQYCRRSTVTIN 380
+Y + V +
Sbjct: 467 HEYLQTQVVYLQ 478
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Query: 47 ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXX--XXXXXPRRGEIVRQIG 104
AN INP E I +V +G +D R I ++R RG+ VR I
Sbjct: 45 ANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIA 104
Query: 105 DALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVL 164
D ++ L +L +L+ GK L E ++ + ++ Y GL+ G ++ S P
Sbjct: 105 DKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTES 164
Query: 165 LENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
P+GVV I+ +N+P+ W A AL
Sbjct: 165 KIVKEPVGVVTQITPWNYPLLQASWKIAPAL 195
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 87/237 (36%), Gaps = 66/237 (27%)
Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL-------------- 252
+ LELGG N I+ +DAD LA + AGQ C+ R+ +
Sbjct: 276 IALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALID 335
Query: 253 ------------------------HKKKID------------------RP-------GYF 263
H+ KI+ RP G F
Sbjct: 336 RVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLF 395
Query: 264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
EPT++T + R+V E F P+V V F++ EAI N+ GL+ ++F+KD+
Sbjct: 396 FEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQ 455
Query: 324 KWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
+ IN P +GG K +G GRE G + ++Y + N
Sbjct: 456 RVANKLKLGTVWINDFHPYFAQ---APWGGYKQSGIGRELGKEGLEEYLVSKHILTN 509
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 68/241 (28%)
Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH------------- 253
++LELGG ++V +DADL+ A + ++ GQ CT RL++H
Sbjct: 254 VMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLP 313
Query: 254 ----------------------KKKIDRPGYFVE------PTIVTG-------------- 271
+++ID + V T+ TG
Sbjct: 314 LVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCW 373
Query: 272 --------LPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
+ ++ VVH ETF PI+ + S+++AI + N+ GLS+ + T+ N+
Sbjct: 374 YEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANIN 433
Query: 324 KWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382
+ + SD + V I G + G G K +G G E G +QY + TV IN
Sbjct: 434 QAI----SDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINEA 489
Query: 383 K 383
+
Sbjct: 490 E 490
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRH 109
+ I ++PSTG+ I + G D +E ++ R ++R + +R
Sbjct: 28 DTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRE 87
Query: 110 KLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWN 169
L ++ E GK+L+ EV DY + T G ILPS+ + +
Sbjct: 88 NKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKV 147
Query: 170 PLGVVGIISAFNFPVAVYGWNAAIALV 196
P GVV I+A+NFP+A+ G AL+
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALI 174
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
GY+V PT+ + + R+ E F P++ + PF++ DEA+T N+ + GL++ I ++D +
Sbjct: 382 GYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRS 441
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEI--GGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
+ S G++ V NG E+ G FGG K++G RE G K++ ++
Sbjct: 442 KCRRIAAQVRS--GMVEV----NGHELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 55 INPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPL 114
I+PST E A + G+ +D + I +++ R V +I + + +
Sbjct: 46 IDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDM 105
Query: 115 GQLVSLEMGKIL--------AEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
+ +S+EMG + A G ++ FI + +S E +L
Sbjct: 106 AKTISMEMGAPIDMALNAQTATGSSHIRNFIKAY-------KEFSFQEALIEGNEQAIL- 157
Query: 167 NWNPLGVVGIISAFNFPV 184
+++ +GVVG+I+ +N+P+
Sbjct: 158 HYDAIGVVGLITPWNWPM 175
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCG------TAGQRCTTTR------ 248
Q+ F + +E GG +AIIV+E AD +LA + +V + G +A R T+
Sbjct: 279 QTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPV 338
Query: 249 ---------------------------------------------RLFLHKKKIDRPGYF 263
+L L K+++ GYF
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYF 398
Query: 264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
+ PT+ T +P +R+ E F P++ V EA+ N+ GL+ ++++ +L
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHL- 457
Query: 324 KWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGS 365
+W + G + N GA +G FGG K +G ++G+
Sbjct: 458 EW-ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 39 VYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRG 97
+Y G W E + S+NPS E + + + + +E++ R
Sbjct: 40 LYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRS 99
Query: 98 EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTY---SGSI 154
++ + +R + L + E+GK E +V E ID +Y + Y + +
Sbjct: 100 RLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEV 159
Query: 155 LPSERPGHVLLENWNPLGVVGIISAFNFPVAVY 187
+P PG + PLG +I+ +NFPVA++
Sbjct: 160 VPY--PGEDNESFYVPLGAGVVIAPWNFPVAIF 190
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 60/223 (26%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCG------TAGQRCTTTR------ 248
Q+ F + +E GG +AIIV+E AD +LA + +V + G +A R T+
Sbjct: 279 QTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPV 338
Query: 249 ---------------------------------------------RLFLHKKKIDRPGYF 263
+L L K+++ GYF
Sbjct: 339 LERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYF 398
Query: 264 VEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323
+ PT+ T +P +R+ E F P++ V EA+ N+ GL+ ++++ +L
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHL- 457
Query: 324 KWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGS 365
+W + G + N GA +G FGG K +G ++G+
Sbjct: 458 EW-ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGA 499
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 39 VYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRG 97
+Y G W E + S+NPS E + + + + +E++ R
Sbjct: 40 LYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRS 99
Query: 98 EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTY---SGSI 154
++ + +R + L + E+GK E +V E ID +Y + Y + +
Sbjct: 100 RLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEV 159
Query: 155 LPSERPGHVLLENWNPLGVVGIISAFNFPVAVY 187
+P PG + PLG +I+ +NFPVA++
Sbjct: 160 VPY--PGEDNESFYVPLGAGVVIAPWNFPVAIF 190
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 85/237 (35%), Gaps = 66/237 (27%)
Query: 204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTT-TRRL------------ 250
F K+ LELGG + IV +D D+ A + GQ CT TR L
Sbjct: 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAE 301
Query: 251 ----------------------FLHKKKIDR---------------------------PG 261
+ KK+ D+ G
Sbjct: 302 LKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKG 361
Query: 262 YFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTN 321
YF PTI + + + E F P+ V ++ LDEAI N+ K GL+ + KD
Sbjct: 362 YFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKET 421
Query: 322 LFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
L K + + G + +N ++ FGG K +G GRE G +++ ++
Sbjct: 422 LHKVA--RSIEAGTVEINEAGRKPDL--PFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 14/139 (10%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRH 109
E I INP+T E I V +GN D + +E++ R ++ +I +
Sbjct: 23 ETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYEN 82
Query: 110 KLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL-----SRTYSGSILPSERPGHVL 164
+ + Q ++ E+G L+ + Y GL +R + ER G L
Sbjct: 83 RKDDIVQAITDELGAPLS--------LSERVHYQXGLNHFVAARDALDNYEFEERRGDDL 134
Query: 165 LENWNPLGVVGIISAFNFP 183
+ +GV G+I+ +NFP
Sbjct: 135 VVK-EAIGVSGLITPWNFP 152
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G+F++PT+ + + + E F P++ + P+D+ ++AI N+ GL+ S++T DV
Sbjct: 366 GFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVP 425
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
K Q G +N + G FGG K +G GRE+G + + + ++ +V +
Sbjct: 426 KGIKI--SQQIRTGTYGINW--YAFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481
Query: 381 HGKEI 385
G +
Sbjct: 482 MGYTV 486
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 196 VGVAVQSRFGKLL----LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLF 251
VG V R ++L LELGG +A I+ ED DL A +VF+ AGQ C R+
Sbjct: 236 VGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRIL 295
Query: 252 LHKKKIDR 259
+ + D
Sbjct: 296 APRSRYDE 303
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
R+ K +R G F +PTI+ +P N++V ETF P+ +F F + I N+ +
Sbjct: 352 RVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEF 411
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
GL++ + +D++ +F+ +G + + G++ +N E+ FGG K +G GRE
Sbjct: 412 GLAAYFYARDLSRVFR-VG-EALEYGIVGINTGIISNEV-APFGGIKASGLGREGSKYGI 468
Query: 369 KQY 371
+ Y
Sbjct: 469 EDY 471
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
NGE I NP+ G+ + SV + + I+++ R I+R + +
Sbjct: 23 NGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLM 82
Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
L +L++LE GK LAE GE+ ++ + G +P + L+
Sbjct: 83 MEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVI 142
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
P+GV I+ +NFP A+ A AL
Sbjct: 143 KQPIGVTAAITPWNFPAAMITRKAGPALAA 172
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
R+ K +R G F +PTI+ +P N++V ETF P+ +F F + I N+ +
Sbjct: 352 RVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEF 411
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSW 368
GL++ + +D++ +F+ +G + + G++ +N E+ FGG K +G GRE
Sbjct: 412 GLAAYFYARDLSRVFR-VG-EALEYGIVGINTGIISNEV-APFGGIKASGLGREGSKYGI 468
Query: 369 KQY 371
+ Y
Sbjct: 469 EDY 471
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
NGE I NP+ G+ + SV + + I+++ R I+R + +
Sbjct: 23 NGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLM 82
Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
L +L++LE GK LAE GE+ ++ + G +P + L+
Sbjct: 83 MEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVI 142
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
P+GV I+ +NFP A+ A AL
Sbjct: 143 KQPIGVTAAITPWNFPAAMITRKAGPALAA 172
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
+ GY++EPTIVT + + ++ E F P++ V F S DEAI N+ + GL++++F+ D
Sbjct: 367 KKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSND 426
Query: 319 VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
+ + + + G + VN + + +GG K +G GRE G + Y VT
Sbjct: 427 LERCERIT--KALEVGAVWVNC-SQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVT 483
Query: 379 INHGKE 384
+ E
Sbjct: 484 QDISDE 489
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 52 IPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXX--XXXXXPRRGEIVRQIGDALRH 109
IP INPST E I + +D + ++R R +R I +
Sbjct: 25 IPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAHRATYLRAIAAKITE 84
Query: 110 KLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGS-----ILPSER-PGHV 163
K +L +++ GK E + ++ + +Y G + G LP ER HV
Sbjct: 85 KKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGKQKAPVTLPMERFKSHV 144
Query: 164 LLENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
L + PLGVVG+IS +N+P+ + W A AL
Sbjct: 145 LRQ---PLGVVGLISPWNYPLLMATWKIAPALAA 175
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
DR GYF++PT+ + + E F P++ + F +++E + N GL++++FTK
Sbjct: 376 DR-GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTK 434
Query: 318 DVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
D+ +L Q G + VN GA+ FGG K +G GRE G + Y T
Sbjct: 435 DLDKA-NYLS-QALQAGTVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKT 490
Query: 377 VTIN 380
VT+
Sbjct: 491 VTVK 494
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 35 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 94
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
+ L L +L+ GK + + ++ + Y G + Y G +P +
Sbjct: 95 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 154
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
+ P+GV G I +NFP+ + W AL
Sbjct: 155 RH-EPVGVCGQIIPWNFPLLMQAWKLGPAL 183
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
DR GYF++PT+ + + E F P++ + F +++E + N GL++++FTK
Sbjct: 370 DR-GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTK 428
Query: 318 DVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376
D+ +L Q G + VN GA+ FGG K +G GRE G + Y T
Sbjct: 429 DLDKA-NYLS-QALQAGTVWVNCYDVFGAQ--SPFGGYKMSGSGRELGEYGLQAYTEVKT 484
Query: 377 VTIN 380
VT+
Sbjct: 485 VTVK 488
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
Query: 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX---XXXXPRRGEIVRQIGDA 106
+ P++NPSTGE I V +G+ +D + ++++R RG ++ ++ D
Sbjct: 29 KTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 88
Query: 107 LRHKLVPLGQLVSLEMGK-ILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLL 165
+ L L +L+ GK + + ++ + Y G + Y G +P +
Sbjct: 89 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYT 148
Query: 166 ENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
+ P+GV G I +NFP+ + W AL
Sbjct: 149 RH-EPVGVCGQIIPWNFPLLMQAWKLGPAL 177
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 228 AQQCLVFACCGTA---GQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETF 284
AQ V C +A G T R H KK GYFVEPTI+T + + ++ E F
Sbjct: 340 AQYKKVLNCISSAKSEGATILTGGRRPEHLKK----GYFVEPTIITDVTTSMQIWREEVF 395
Query: 285 APIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG 344
P++ V F + +EAI N+ GL S++ + D+ + + G++ +N
Sbjct: 396 GPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERL--SKALQAGIVWINC-AQP 452
Query: 345 AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
+ I +GG K +G GRE G + Y VT
Sbjct: 453 SFIQAPWGGIKRSGFGRELGEWGLENYLSVKQVT 486
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 52 IPSINPSTGETIASVQQGNVQDYHRCIES-----SRXXXXXXXXXXXPRRGEIVRQIGDA 106
IP+INPST I + +D +++ SR R +R I
Sbjct: 25 IPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAASGSLRARYLRAIAAK 84
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL-----SRTYSGSILPSERPG 161
++ K LG+L S++ GK L E + ++ + + +Y GL S+ + LP +
Sbjct: 85 IKEKKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEELDSKQKAPISLPMDTFK 144
Query: 162 HVLLENWNPLGVVGIISAFNFPVAVYGWN 190
+L+ P+GVV +I+ +N+P + W
Sbjct: 145 SYILK--EPIGVVALITPWNYPFLMATWK 171
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 209 LELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
LELGG + I+V ED DL+ + VF C T GQ C+ T RL +H+
Sbjct: 259 LELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHE 304
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%)
Query: 55 INPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPL 114
+NP+T E + V +D +++ PRR I+ L L
Sbjct: 26 VNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85
Query: 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVV 174
L+++E GK E +GEV I+ ++A G G L S P+GVV
Sbjct: 86 AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVV 145
Query: 175 GIISAFNFPVAVYGWNAAIAL 195
G I+ FNFP+ V W +A+
Sbjct: 146 GGIAPFNFPMMVPCWMFPMAI 166
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 254 KKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSS 313
++ + GYFV PTI + + E FAP++ V +L EAI N+ + +
Sbjct: 353 RENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGAC 412
Query: 314 IFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEK--YTGGGRESGSDSWKQY 371
+FT + +N ++ + D G++ +N+ F G K + G +G DS Y
Sbjct: 413 LFTSN-SNAIRYFR-ENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFY 470
Query: 372 CRRSTVTINH 381
R+ VT +
Sbjct: 471 TRKKVVTARY 480
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
F EPT++TG+ + V ETF P+ +F F S +E + N+ + GL++ ++++D+ +
Sbjct: 369 FFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRV 428
Query: 323 FKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRE 362
W + + G++ +N E+ FGG K +G GRE
Sbjct: 429 --WRVAEALEYGMVGINTGLISNEV-APFGGVKQSGLGRE 465
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKID 258
KL LELGGN IV +DADL+ A + + + GQ C T R F+H++ D
Sbjct: 253 KLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYD 305
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Query: 40 YDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRG 97
Y G W+A + +P+TGE++ +V + + R IE+++ R
Sbjct: 16 YIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERA 75
Query: 98 EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPS 157
I+R+ D + L +++ E GK LAE GE+ ++ + +G LP+
Sbjct: 76 AILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPT 135
Query: 158 ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
++ P+GV I+ +NFP A+ AL
Sbjct: 136 PDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPAL 173
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 39 VYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXP 94
+Y G W+ IP INP+T E I + +D +E++R
Sbjct: 26 LYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTGA 85
Query: 95 RRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL-----SRT 149
+R + +R I + K L L SL+ GK L E ++ + +Y GL SR
Sbjct: 86 QRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEALDSRR 145
Query: 150 YSGSILPSER-PGHVLLENWNPLGVVGIISAFNFPVAVYGWN 190
+ L S+ +VL E PLGVVG+I+ +N+P+ + W
Sbjct: 146 MTPVNLNSDSYKSYVLRE---PLGVVGLITPWNYPLLMAIWK 184
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
+ GY+V+PTI+T + + + E F P++ V F + ++AI N+ K GL +++ +KD
Sbjct: 384 KKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKD 443
Query: 319 VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
V ++ + IN + PT +GG+K +G GR+ G ++ + +
Sbjct: 444 VKRCERFTKAFQTGIIWINCSQPTFNEL---PWGGKKRSGFGRDLG-----KWGLENFLN 495
Query: 379 INHGKEITLAQGIKF 393
I E T A+ + F
Sbjct: 496 IKQVTEYTSAEPLAF 510
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 70/247 (28%)
Query: 209 LELGGNNAIIVNEDAD-LNLAQQCLVFACCGTAGQRCT-TTR-------------RLFLH 253
LELGG + I+V +D D L++A + +F GQ C+ T+R RL
Sbjct: 272 LELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKW 331
Query: 254 KKKI------------------------------------------DRP-----GYFVEP 266
K I +RP GY+V+P
Sbjct: 332 TKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQP 391
Query: 267 TIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWL 326
TI+T + + + E F P++ V F + ++AI N+ K GL +++ +KDV ++
Sbjct: 392 TIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFT 451
Query: 327 GPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEIT 386
+ IN + PT +GG+K +G GR+ G ++ + + I E T
Sbjct: 452 KAFQTGIIWINCSQPTFNEL---PWGGKKRSGFGRDLG-----KWGLENFLNIKQVTEYT 503
Query: 387 LAQGIKF 393
A+ + F
Sbjct: 504 SAEPLAF 510
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 39 VYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXX--XXXXP 94
+Y G W+ IP INP+T E I + +D +E++R
Sbjct: 26 LYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTGA 85
Query: 95 RRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL-----SRT 149
+R + +R I + K L L SL+ GK L E ++ + +Y GL SR
Sbjct: 86 QRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEALDSRR 145
Query: 150 YSGSILPSER-PGHVLLENWNPLGVVGIISAFNFPVAVYGWN 190
+ L S+ +VL E PLGVVG+I+ +N+P+ + W
Sbjct: 146 MTPVNLNSDSYKSYVLRE---PLGVVGLITPWNYPLLMAIWK 184
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G+F+EPTI+T + + + E F P++ V F + DEAI N+ + GL+ ++ + D
Sbjct: 389 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRE 448
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378
+ + C +N + P +GG K +G GRE G Y VT
Sbjct: 449 RCQRLSEEIDAGCIWVNCSQPCF---CQAPWGGNKRSGFGRELGEGGIDNYLSVKQVT 503
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
+ LELGG + I+V +D D++ A + +F C T GQ C+ T RL +H K
Sbjct: 274 VTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTK 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 26 LKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXX 85
L++L + G P A G +P +NP+T I + G +D + ++R
Sbjct: 24 LRQLFVDGEWRP--------PAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAAL 75
Query: 86 XXXXXXXXPR-----RGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQE----F 136
R R + +R I + + L +L +L+ GK E ++ + F
Sbjct: 76 KRNRGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCF 135
Query: 137 IDICDYAVGLSRTYSGSI-LPSER-PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA 194
D A L + + + LP E H+ E P+GVVG+I+ +N+P+ + W A A
Sbjct: 136 EYFADQAEALDKRQNSPVSLPMETFKCHLRRE---PIGVVGLITPWNYPLLMATWKIAPA 192
Query: 195 LVG 197
L
Sbjct: 193 LAA 195
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G F EP I+TG+ + V ETF P+ +F FD+ +E I N+ GL++ +T++ +
Sbjct: 385 GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFS 444
Query: 321 NLFKW-----LGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQY 371
+ G G + GLI+ + FGG K +G GRE ++Y
Sbjct: 445 RAIRVSEALEYGMVGHNTGLISNEV--------APFGGVKQSGLGREGSKYGIEEY 492
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%)
Query: 47 ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDA 106
A+G I NP+ G I +V +V I++S R I+R+ D
Sbjct: 45 ADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDL 104
Query: 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLE 166
+ + +++ E GK LAE GEV ++ ++ G +P+ + G L
Sbjct: 105 IIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTV 164
Query: 167 NWNPLGVVGIISAFNFPVAVYGWNAAIAL 195
P+GV I+ +NFP A+ AA AL
Sbjct: 165 IRQPVGVTAAITPWNFPAAMITRKAAPAL 193
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 259 RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD 318
+ G+F+EPTI+T + N ++ E F P++ V F + +EAI N+ GL +++ + D
Sbjct: 370 KKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISND 429
Query: 319 ------VTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC 372
VT FK G++ VN + +GG K +G GRE G Y
Sbjct: 430 LERCERVTKAFK--------AGIVWVNC-SQPCFTQAPWGGVKRSGFGRELGEWGLDNYL 480
Query: 373 RRSTVT 378
VT
Sbjct: 481 SVKQVT 486
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 184 VAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
VA G +A + + A + LELGG + ++V ED DL+ A + +F C T GQ
Sbjct: 234 VAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQI 293
Query: 244 CTTTRRLFLHK 254
C+ T RL LH+
Sbjct: 294 CSATSRLILHE 304
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 16/160 (10%)
Query: 44 SWKAN--GEIIPSINPSTGETIASVQQGNVQDYHRCIES-----SRXXXXXXXXXXXPRR 96
WKA + IP INP+T I + +D + + +R R
Sbjct: 15 DWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVR 74
Query: 97 GEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLS-----RTYS 151
+R I + K L +L S++ GK L E ++ + +Y L+ R +
Sbjct: 75 ARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKA 134
Query: 152 GSILPSER-PGHVLLENWNPLGVVGIISAFNFPVAVYGWN 190
LP + HVL E P+GVVG+I+ +N+P+ + W
Sbjct: 135 PVSLPMDTFKSHVLRE---PIGVVGLITPWNYPMLMATWK 171
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 2/147 (1%)
Query: 40 YDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRG 97
Y G WK A G NP+TG IA V +D +E+ + R
Sbjct: 15 YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIETRR 74
Query: 98 EIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPS 157
+ + I D L+ +G+++ E GK E GEV DY +P
Sbjct: 75 KWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPE 134
Query: 158 ERPGHVLLENWNPLGVVGIISAFNFPV 184
+ ++ P+GV G+I +NFP+
Sbjct: 135 KPKDCTWTVHYRPVGVTGLIVPWNFPI 161
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G F PT+V G+ ETF P+V F + +E I N+ + GL+S +FT D
Sbjct: 367 GLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAE 426
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
+ G G + N T G FGG K +G GRE G + ++ TV
Sbjct: 427 RAQRVAA--GLRFGHVGWNTGT-GPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV 480
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%)
Query: 198 VAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKI 257
V + KL LELGGN IV +DADL A L+ GQ C R+F+H+K
Sbjct: 244 VDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVA 303
Query: 258 D 258
D
Sbjct: 304 D 304
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/463 (19%), Positives = 165/463 (35%), Gaps = 129/463 (27%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
N E + INP + E I + + ++ I+++ +R I+ I +
Sbjct: 10 NREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQI 69
Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS---------------- 151
+ K L ++++++ GK + + EV+ I A + +
Sbjct: 70 KEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSDDRLIFTRRE 129
Query: 152 -----GSILPSERP--------------GHVLLENWN---PLGVVGI-------ISAFNF 182
G+I P P G+V++ + + PL + + + +N
Sbjct: 130 PVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNV 189
Query: 183 PVAVYGW--------------NAAIALVGVAVQSRFGKLL----------LELGGNNAII 218
P+ VY N + ++ S+ G+L+ LELGG N I
Sbjct: 190 PLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFKKIALELGGVNPNI 249
Query: 219 VNEDADLNLAQQCLVFACCGTAGQRCTTT-------------RRLFLHKKKI-------- 257
V +DADLN A L+ AGQ C + +F++K K+
Sbjct: 250 VLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLD 309
Query: 258 -----------------------------------DRPGYFVEPTIVTGLPHNSRVVHRE 282
R PTI+ + ++ + E
Sbjct: 310 EKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTILE-VDRDNILCKTE 368
Query: 283 TFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPT 342
TFAP++ + + +E I N + GL S+IFT D+ K+ + + G + +N +
Sbjct: 369 TFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKF--AENLEFGGVVINDSS 425
Query: 343 NGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEI 385
+ FGG K +G GRE + ++ T+ I+ + +
Sbjct: 426 LFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAENL 468
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 241 GQRCTTTRRLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI 300
G+R T+ R + + R Y + PT+ G H ++ E F P++ PF +EA+
Sbjct: 374 GERAKTSFR----GEDLSRGNYLL-PTVFVGENH-MKIAQEEIFGPVLVAIPFKDEEEAL 427
Query: 301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
N+ K GL++ +FT+D+ + + G++ +N N + FGG K +G
Sbjct: 428 RKANDTKYGLAAYVFTRDLERAHRLA--LELEAGMVYLN-SHNVRHLPTPFGGVKGSGDR 484
Query: 361 RESGSDSWKQYCRRSTVTI 379
RE G+ + Y T+ +
Sbjct: 485 REGGTYALDFYTDLKTIAL 503
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 99/277 (35%), Gaps = 69/277 (24%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
+GE PS++P+T E + +G ++ R +++ R + +I + +
Sbjct: 40 SGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELI 99
Query: 108 RHKLVPLGQLVSLEMGKIL----------AEGIGEVQEFI-------------DICDYAV 144
L + L+ G++L AE E+ D Y V
Sbjct: 100 EKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTV 159
Query: 145 GLSRTYSGSILPSERP---------------GHVLLE--NWNPL---GVVGIISAFNFPV 184
+ G I P P V+L+ W+P + I+ + P
Sbjct: 160 RVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPP 219
Query: 185 AVY------GWNAAIALVGVAV--------QSRFGKLLL------------ELGGNNAII 218
V+ G A ALV + ++ GK+++ ELGG + +
Sbjct: 220 GVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPAL 279
Query: 219 VNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK 255
V DADL A +VF G+RCT + RL + +K
Sbjct: 280 VFADADLERALDAVVFQIFSFNGERCTASSRLLVEEK 316
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 249 RLFLHKKKIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQ 308
++F +ID G F PTI+T + ++ V +E F PI VF + + AI N+
Sbjct: 329 KVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSY 388
Query: 309 GLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRE 362
GL SS+ D+ K + +IN T+G E+ FGG K +G GRE
Sbjct: 389 GLGSSVIGSDIDRAKKVSAQIETGXTVINGRWITSG-EL--PFGGIKKSGYGRE 439
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%)
Query: 54 SINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVP 113
S+NP T E AS + I + R EI+ I +AL+
Sbjct: 8 SVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDE 67
Query: 114 LGQLVSLEMGKILAEGIGEVQEFIDICDY 142
L + +LE GK+L+E EV+ + IC+Y
Sbjct: 68 LAKXXTLEXGKLLSESKEEVELCVSICNY 96
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 184 VAVYGWNAAIALVGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQR 243
VA+ G + V A K ELGGN+A IV +DAD + + L A GQ
Sbjct: 205 VALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQV 264
Query: 244 CTTTRRLFLHKKKIDR 259
CT+++R+ + K + D
Sbjct: 265 CTSSKRIIVEKSRYDE 280
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G++ PT+ T + H+ +V ETF PI V PF ++EA+ N+ GLS+++F
Sbjct: 343 GWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSED 402
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEK----YTG-GGRESGSDSWKQYCRRS 375
K + + G I++N + A GEK ++G GG G+ K++ R+
Sbjct: 403 EALK--VARQLNAGAISIN---DAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQ 457
Query: 376 TVTIN 380
I
Sbjct: 458 AFLIK 462
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
RF LELGG + IV E A+L LA +++ GQ C + R+++ + K +
Sbjct: 225 RFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEE 281
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 38/59 (64%)
Query: 201 QSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
Q+ ++++E+GG + ++V+ DADL+LA + ++ + G +GQ+C+ R +HK D
Sbjct: 278 QNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDE 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G+F++PTI+ L + ++ E F P+V + D A+ N + GL+ ++ T++
Sbjct: 396 GFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESGSDSW 368
++ + + G + N GA +G FGG K +G ++G +
Sbjct: 456 HIEQ--AKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDY 502
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 16/194 (8%)
Query: 13 FRSYSDSVSKYPFLKELGLS----GSVNPGVYDGTSWKANGEIIPSINPS-TGETIASVQ 67
F ++ ++ F + LGL G P + +G +I S NP+ + + SV
Sbjct: 11 FTDFTVEANRKAFEEALGLVEKELGKEYPLIINGERVTTEDKI-QSWNPARKDQLVGSVS 69
Query: 68 QGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA 127
+ N + I+S+ R I+ + +R + + E GK
Sbjct: 70 KANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWK 129
Query: 128 EGIGEVQEFIDICDY-AVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAV 186
E + E ID +Y A + G + S RPG + P+GV IS +NF +A+
Sbjct: 130 EADADTAEAIDFLEYYARQMIELNRGKEILS-RPGEQNRYFYTPMGVTVTISPWNFALAI 188
Query: 187 YGWNAAIALVGVAV 200
+VG AV
Sbjct: 189 --------MVGTAV 194
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
GYFV TI+ G+ R+ E F P++ V D+AI W N + L+ IF++
Sbjct: 890 GYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPE 949
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTG-GGRESGSDSWKQYCRRSTVT 378
+L K + G + +N GA + FGG + +G G + G D + VT
Sbjct: 950 HLAK--ARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVT 1007
Query: 379 IN 380
N
Sbjct: 1008 EN 1009
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 2/165 (1%)
Query: 33 GSVNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRXXXXXXXXX 91
G P +G + N ++IP++NP+ E + + Q + I +++
Sbjct: 529 GKTYPLFINGKEVRTN-DLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDT 587
Query: 92 XXPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYS 151
R E + + A R +L L LE+GK + +V E ID +Y
Sbjct: 588 DPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLG 647
Query: 152 GSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
PG + + P GV +I+ +NFP+A+ A+ A+V
Sbjct: 648 QPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIV 692
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 239 TAGQRCTTTRRLFLHKKKIDR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLD 297
TAG T+ L L ++I R G + PT+ G+ + + E F P++ F + D
Sbjct: 360 TAG--ITSGAELLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTAD 417
Query: 298 EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGA-EIGGAFGGEKY 356
EA+ N + GLS+S+++ ++ + + + G +N +G E+ GG K
Sbjct: 418 EAVALANATEFGLSASVWSTNLETALQTI--RRIRAGRCWINSVIDGTPEL--PIGGYKK 473
Query: 357 TGGGRESGSDSWKQYCRRSTVTINHGK 383
+G GRE G + +Y + V + G+
Sbjct: 474 SGLGRELGRYGFDEYSQFKGVHVTLGR 500
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 96 RGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSI- 154
R + ++ D + + L + SLE+GK +A+ GE+ D+ YA G +R G
Sbjct: 87 RSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTH 146
Query: 155 --LPSERPGHVLLENWNPLGVVGIISAFNFPVAV 186
+ +R G VL E P+GVVGII+ +NFP +
Sbjct: 147 NNIGDDRLGLVLRE---PVGVVGIITPWNFPFII 177
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 200 VQSRFGKL------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
+ R GK+ +LELGG ++ IV EDADL L + ++ G +GQRCT +R+ +
Sbjct: 234 IGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM 293
Query: 254 KKKIDR 259
+ D
Sbjct: 294 ESVADE 299
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 5/163 (3%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEI 99
Y WK + I P++G + SV + ++ S++ R
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 100 VRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP--- 156
+ ++ D L +G ++S E+ K + EV +I +YA G +L
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 157 --SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
+ + + P+G+V IS FN+PV + G A AL+
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIA 170
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
+I R G + P + + + R+ E F P++ + S++EAI +N+ + GL +SIF
Sbjct: 351 EIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
T D F + + G +++N T F G K +G G
Sbjct: 411 TNDFPRAFGI--AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 200 VQSRFGKL------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
+ R GK+ +LELGG ++ IV EDADL L + ++ G +GQRCT +R+ +
Sbjct: 234 IGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM 293
Query: 254 KKKIDR 259
+ D
Sbjct: 294 ESVADE 299
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 5/163 (3%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEI 99
Y WK + I P++G + SV + ++ S++ R
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 100 VRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP--- 156
+ ++ D L +G ++S E+ K + EV +I +YA G +L
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 157 --SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
+ + + P+G+V IS FN+PV + G A AL+
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIA 170
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
+I R G + P + + + R+ E F P++ + S++EAI +N+ + GL +SIF
Sbjct: 351 EIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
T D F + + G +++N T F G K +G G
Sbjct: 411 TNDFPRAFGI--AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 69/255 (27%)
Query: 198 VAVQSRFGKLLLELGGNNAIIVNEDADLNLA-------------QQCL----VFACCGTA 240
++ +++ ++LELGG + IV +DADL L Q+C VF A
Sbjct: 247 ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA 306
Query: 241 GQRCTTTRRLF-----------------LHKKK-------ID--------------RPGY 262
Q + L + +K ID R G
Sbjct: 307 DQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN 366
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKD---V 319
+ PT++ + RV E F P++ + +EAI+ +N+ GL +SIFTKD
Sbjct: 367 LLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRA 426
Query: 320 TNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379
N+ K L + G +++N T F G K +G G + S R +
Sbjct: 427 INIGKHL-----EVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481
Query: 380 NHGKEITLAQGIKFE 394
N LA+ + F+
Sbjct: 482 N------LAENLYFQ 490
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 5/154 (3%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
GE I P++G + S+ + ++ + I+ ++ R +++ D L
Sbjct: 25 TGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLL 84
Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER-----PGH 162
+ +G+L+ E+ K IGEV DI + + +G L ++
Sbjct: 85 EERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKK 144
Query: 163 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALV 196
+ L PLGVV IS FN+PV + A ALV
Sbjct: 145 IALVEREPLGVVLAISPFNYPVNLAAAKIAPALV 178
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 200 VQSRFGKL------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
+ R GK+ +L LGG ++ IV EDADL L + ++ G +GQRCT +R+ +
Sbjct: 234 IGERIGKMAGMRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM 293
Query: 254 KKKIDR 259
+ D
Sbjct: 294 ESVADE 299
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
+I R G + P + + + R+ E F P++ + S++EAI +N+ + GL +SIF
Sbjct: 351 EIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
T D F + + G +++N T F G K +G G
Sbjct: 411 TNDFPRAFGI--AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 5/163 (3%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEI 99
Y WK + I P++G + SV + ++ S++ R
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 100 VRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP--- 156
+ ++ D L +G ++S E+ K + EV +I +YA G +L
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 157 --SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
+ + + P+G+V IS FN+PV + G A AL+
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIA 170
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 200 VQSRFGK-----LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFL 252
+ S+FG L LE GGNN ++V E ADL+ A ++ + +AGQRCT RRL +
Sbjct: 233 LHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLV 290
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 2/145 (1%)
Query: 40 YDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGE 98
Y W A GE + S++P + S + + + ++R +R E
Sbjct: 9 YIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIE 68
Query: 99 IVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE 158
++ + L+ + L +++ E GK L E EV ++ +V R +G
Sbjct: 69 LLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTGEKSGPL 128
Query: 159 RPGHVLLENWNPLGVVGIISAFNFP 183
+L + P GVV + +NFP
Sbjct: 129 ADATAVLRH-KPHGVVAVFGPYNFP 152
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 282 ETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIP 341
E F P++ V + AI N + GL++ + + ++L S G++N N
Sbjct: 380 EFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFL--VESRAGIVNWNKQ 437
Query: 342 TNGAEIGGAFGGEKYTGGGRES 363
GA FGG +G R S
Sbjct: 438 LTGAASSAPFGGIGASGNHRPS 459
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 200 VQSRFGKL------LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH 253
+ R GK+ +LELGG ++ IV EDADL L + ++ G +GQR T +R+ +
Sbjct: 234 IGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVM 293
Query: 254 KKKIDR 259
+ D
Sbjct: 294 ESVADE 299
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 64/163 (39%), Gaps = 5/163 (3%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEI 99
Y WK + I P++G + SV + ++ S++ R
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 100 VRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP--- 156
+ ++ D L +G ++S E+ K + EV +I +YA G +L
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 157 --SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
+ + + P+G+V IS FN+PV + G A AL+
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIA 170
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 256 KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIF 315
+I R G + P + + + R+ E F P++ + S++EAI +N+ + GL +SIF
Sbjct: 351 EIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIF 410
Query: 316 TKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG 360
T D F + + G +++N T F G K +G G
Sbjct: 411 TNDFPRAFGI--AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG 453
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G V P + + + + + E F P++ V D A N GLS+++++KD+
Sbjct: 367 GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDID 426
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380
++ D G++++N T E FGG K +G GR +G + +++ + I
Sbjct: 427 RAAQFA--LQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIK 484
Query: 381 HGKE 384
E
Sbjct: 485 RSAE 488
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 1/151 (0%)
Query: 51 IIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDALRHK 110
I +INP IA +Q ++ D E+++ R I+ + + L
Sbjct: 29 ISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEH 88
Query: 111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNP 170
+ + + E G ++ E+ +I + G I PS PG
Sbjct: 89 REEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVA 148
Query: 171 LGVVGIISAFNFPVAVYGWNAAIAL-VGVAV 200
GVVG+IS +NFP+ + + A AL VG AV
Sbjct: 149 KGVVGVISPWNFPLNLSIRSVAPALAVGNAV 179
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 90/242 (37%), Gaps = 72/242 (29%)
Query: 199 AVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH----- 253
A ++LELGG +IV DADL+ L+F +GQ C L++H
Sbjct: 225 AAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKD 284
Query: 254 -------------------------KKKIDRPGYFVEPT--------------------I 268
++++ R +E T +
Sbjct: 285 ALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQADVSKRALSATV 344
Query: 269 VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITW-NNEVKQGLSSSIFTKDVTNLFKWLG 327
V G+ N ++ E F PI+ V FDS+ AI N + L+ +F KD+ ++ K
Sbjct: 345 VDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDM-DVAK--- 400
Query: 328 PQGSDCGLINVNIPTNGAEIGGA----------FGGEKYTGGGRESGSDSWKQYCRRSTV 377
G+IN I + A++ G FGG +G G G S+ + + +V
Sbjct: 401 ------GIIN-QIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
Query: 378 TI 379
I
Sbjct: 454 RI 455
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSI 314
D GYFVEP IV ++ E F P+ VYV+P D E + ++ GL+ ++
Sbjct: 426 DSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAV 485
Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
F++D + + + G +N + G+ +G FGG + +G + G
Sbjct: 486 FSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSI 314
D GYFVEP IV ++ E F P+ VYV+P D E + ++ GL+ ++
Sbjct: 426 DSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAV 485
Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
F++D + + + G +N + G+ +G FGG + +G + G
Sbjct: 486 FSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSI 314
D GYFVEP IV ++ E F P+ VYV+P D E + ++ GL+ ++
Sbjct: 426 DSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAV 485
Query: 315 FTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
F++D + + + G +N + G+ +G FGG + +G + G
Sbjct: 486 FSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPG 536
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 263 FVEPTIVTGLPHNSR---VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
+V+PT+V + + RE FAP+ LD+AI N GL +++F +DV
Sbjct: 373 YVQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDV 432
Query: 320 TNLFKWLGPQGSDCGLINVN-IPTNGAEIG-GAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
+ + + + + G I +N +P +G IG FGG K +G RE + + T+
Sbjct: 433 VKIRRAV--RLLEVGAIYINDMPRHG--IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488
Query: 378 TINH 381
N+
Sbjct: 489 VFNY 492
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
++ELGG + IV EDADL+LA + AGQRC + + +
Sbjct: 261 VMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAER 307
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 5/150 (3%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS-RXXXXXXXXXXXPRRGE 98
Y W +G+ I +P TIA V + ++ R ++ + R
Sbjct: 22 YLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLA 81
Query: 99 IVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE 158
++R+ D + L +++ + GK + +GEV+ +D A + G +P +
Sbjct: 82 VLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGD 141
Query: 159 RPGHVL----LENWNPLGVVGIISAFNFPV 184
L L PLGVV I+ FN+P+
Sbjct: 142 WTYDTLETEGLVRREPLGVVAAITPFNYPL 171
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
D+ ++ PTI+ + S V+ E F P++ + SL+EAI + N+ ++ L+ +F+
Sbjct: 309 DQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSN 368
Query: 318 DVTNLFKWLGPQGS-----DCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC 372
+ + K + S + ++++ +PT FGG +G G G S++ +
Sbjct: 369 NEKVIKKMIAETSSGGVTANDVIVHITVPT------LPFGGVGNSGMGAYHGKKSFETFS 422
Query: 373 RRSTVTIN 380
R + +
Sbjct: 423 HRRSCLVK 430
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 263 FVEPTIVTGLPHNSR---VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
+V+PT+V + + RE FAP+ LD+AI N GL +++F +DV
Sbjct: 373 YVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDV 432
Query: 320 TNLFKWLGPQGSDCGLINVN-IPTNGAEIG-GAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
+ + + + + G I +N +P +G IG FGG K +G RE + + T+
Sbjct: 433 VKIRRAV--RLLEVGAIYINDMPRHG--IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488
Query: 378 TINH 381
N+
Sbjct: 489 VFNY 492
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
++ELGG + IV EDADL+LA + AGQRC + + +
Sbjct: 261 VMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAER 307
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 5/150 (3%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS-RXXXXXXXXXXXPRRGE 98
Y W +G+ I +P TIA V + ++ R ++ + R
Sbjct: 22 YLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLA 81
Query: 99 IVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE 158
++R+ D + L +++ + GK + +GEV+ +D A + G +P +
Sbjct: 82 VLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGD 141
Query: 159 RPGHVL----LENWNPLGVVGIISAFNFPV 184
L L PLGVV I+ FN+P+
Sbjct: 142 WTYDTLETEGLVRREPLGVVAAITPFNYPL 171
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
F EPT++ + + H ETF P+ V FD+ +EAI N GL+ +++D +
Sbjct: 371 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430
Query: 323 FKWLGPQGSDCGLINVNIPTNG--AEIGGAFGGEKYTGGGRESGSDSWKQY 371
W + + G++ VN G + + FGG K +G GRE +Y
Sbjct: 431 --WRVAEQLEVGMVGVN---EGLISSVECPFGGVKQSGLGREGSKYGIDEY 476
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 61/158 (38%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEI 99
+ G W P +P++G + V V++ + ++ R +
Sbjct: 16 FVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSL 75
Query: 100 VRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER 159
+R+ + + L ++++ E GK L E GE+ ++ +R G I+ +
Sbjct: 76 LRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPA 135
Query: 160 PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
L P+GV +I+ +NFP A+ AL
Sbjct: 136 KDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAA 173
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 61/149 (40%)
Query: 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEIVRQIGDAL 107
+G + NP+TGE +V + D +ES++ RR + + L
Sbjct: 40 SGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFXKFVQLL 99
Query: 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN 167
L + +S E GK + + G++ +++C++ +G+ PG
Sbjct: 100 NDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDXYSI 159
Query: 168 WNPLGVVGIISAFNFPVAVYGWNAAIALV 196
P+G+ I+ FNFP + W A A+
Sbjct: 160 RQPVGIGAGITPFNFPGXIPXWXFAPAIA 188
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 191 AAIALVGVAVQSRF--------GKLLLELGG-NNAIIVNEDADLNLAQQCLVFACCGTAG 241
AA++ VG +R+ GK GG N I+ DADL+ A L+ A G+AG
Sbjct: 242 AAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAG 301
Query: 242 QRC 244
+RC
Sbjct: 302 ERC 304
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320
G+F+ + + + + E F P++ V + +EA++ + + G +I+T+D
Sbjct: 385 GHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGD 444
Query: 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--RESGSDSWKQYCRRSTVT 378
+ + G + VN+P +FGG K + G + G+DS K + R T+T
Sbjct: 445 AARDFA--SRINIGXVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTIT 502
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 263 FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNL 322
F EPT++ + + H ETF P+ V FD+ +EAI N GL+ +++D +
Sbjct: 371 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430
Query: 323 FKWLGPQGSDCGLINVNIPTNG--AEIGGAFGGEKYTGGGRESGSDSWKQY 371
W + + G++ VN G + + FGG K +G GRE +Y
Sbjct: 431 --WRVAEQLEVGMVGVN---EGLISSVECPFGGVKQSGLGREGSKYGIDEY 476
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 61/158 (38%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRXXXXXXXXXXXPRRGEI 99
+ G W P +P++G + V V++ + ++ R +
Sbjct: 16 FVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSL 75
Query: 100 VRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER 159
+R+ + + L ++++ E GK L E GE+ ++ +R G I+ +
Sbjct: 76 LRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPA 135
Query: 160 PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALVG 197
L P+GV +I+ +NFP A+ AL
Sbjct: 136 KDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAA 173
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 263 FVEPTIVTGLPHNSR---VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDV 319
+V+PT V + + RE FAP+ LD+AI N GL +++F +DV
Sbjct: 373 YVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDV 432
Query: 320 TNLFKWLGPQGSDCGLINVN-IPTNGAEIG-GAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
+ + + + + G I +N +P +G IG FGG K +G RE + + T+
Sbjct: 433 VKIRRAV--RLLEVGAIYINDMPRHG--IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488
Query: 378 TINH 381
N+
Sbjct: 489 VFNY 492
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
+ ++ELGG + IV EDADL+LA + AGQRC + + +
Sbjct: 259 QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAER 307
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 5/150 (3%)
Query: 40 YDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESS-RXXXXXXXXXXXPRRGE 98
Y W +G+ I +P TIA V + ++ R ++ + R
Sbjct: 22 YLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLA 81
Query: 99 IVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE 158
++R+ D + L +++ + GK + +GEV+ +D A + G +P +
Sbjct: 82 VLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGD 141
Query: 159 RPGHVL----LENWNPLGVVGIISAFNFPV 184
L L PLGVV I+ FN+P+
Sbjct: 142 WTYDTLETEGLVRREPLGVVAAITPFNYPL 171
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK 317
D ++ PTI+T + S V+ E F P++ + SL+EAI + N+ ++ L+ +F+
Sbjct: 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSS 385
Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377
+ + K + + S G+ ++ + FGG +G G G S++ + R +
Sbjct: 386 N-DKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSC 444
Query: 378 TI 379
+
Sbjct: 445 LV 446
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 261 GYFVEPTIVTGLPHNSRVVHRETFAPI--VYVFPFDSLDEAITW-NNEVKQGLSSSIFTK 317
GY+VEP I+ ++ E F P+ VYV+P D E + ++ GL+ ++F +
Sbjct: 426 GYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQ 485
Query: 318 DVTNLFKWLGPQGSDCGLINVNIPTNGAEIG-GAFGGEKYTGGGRESG 364
D + + + G +N + G+ +G FGG + +G + G
Sbjct: 486 DKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHK 254
F +L E GG N V+ AD++ + + GQ+C+ RL++ K
Sbjct: 308 FPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPK 358
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 89/242 (36%), Gaps = 72/242 (29%)
Query: 199 AVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLH----- 253
A ++LELGG +IV DADL+ L+F +GQ L++H
Sbjct: 225 AAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKD 284
Query: 254 -------------------------KKKIDRPGYFVEPT--------------------I 268
++++ R +E T +
Sbjct: 285 ALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQADVSKRALSATV 344
Query: 269 VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITW-NNEVKQGLSSSIFTKDVTNLFKWLG 327
V G+ N ++ E F PI+ V FDS+ AI N + L+ +F KD+ ++ K
Sbjct: 345 VDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDM-DVAK--- 400
Query: 328 PQGSDCGLINVNIPTNGAEIGGA----------FGGEKYTGGGRESGSDSWKQYCRRSTV 377
G+IN I + A++ G FGG +G G G S+ + + +V
Sbjct: 401 ------GIIN-QIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSV 453
Query: 378 TI 379
I
Sbjct: 454 RI 455
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR 259
L+ E GG NA+I + A +V + +AGQRC+ R LF+ + DR
Sbjct: 757 LIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADR 809
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 96 RGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSIL 155
R + Q L + L+ E GK L + + E++E D C Y R GS
Sbjct: 574 RAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGS-- 631
Query: 156 PSERPGHVLLENWNPL---GVVGIISAFNFPVAVYGWNAAIALVG 197
+ PG N + GV IS +NFP+A++ AL+
Sbjct: 632 ETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMA 676
>pdb|2YFN|A Chain A, Galactosidase Domain Of Alpha-Galactosidase-Sucrose
Kinase, Agask
pdb|2YFO|A Chain A, Galactosidase Domain Of Alpha-Galactosidase-Sucrose
Kinase, Agask, In Complex With Galactose
Length = 720
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 113 PLGQLVSLEMGKILAEGIGEVQEFIDI----CDYAVGLSRTYSGSILPSERP 160
PLG L+ L G+ + V + D YA G+ RTYS LP E P
Sbjct: 27 PLGYLLHLYYGEKTNSSMDYVLTYADRGFSGNPYAAGMDRTYSLDALPQEYP 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,438,949
Number of Sequences: 62578
Number of extensions: 552237
Number of successful extensions: 1447
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1114
Number of HSP's gapped (non-prelim): 253
length of query: 394
length of database: 14,973,337
effective HSP length: 101
effective length of query: 293
effective length of database: 8,652,959
effective search space: 2535316987
effective search space used: 2535316987
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)